BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041183
         (760 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  959 bits (2478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/762 (59%), Positives = 583/762 (76%), Gaps = 3/762 (0%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q Y+L +K+G  LD  LS+ +++ F    DF RA RFL DT   D +++N+LISG ARF 
Sbjct: 41  QSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFR 100

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           Q GP   LF+ LR  GL PD F+ SSLVK CG L++NE+ HGVCLK+G  +  ++VSG +
Sbjct: 101 QPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNG-FVVSGLL 159

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL--ELN 178
           + YAK G++ SAE CF++    D+V +TAMVCG+VWNGEF+K +EVFVEMR LGL  ELN
Sbjct: 160 DGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELN 219

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           EFSLT+VLGA  DV+EGEQ+ G  VK+G L G   HLNNA+MN+Y RCG K DA+KMFDE
Sbjct: 220 EFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDE 279

Query: 239 ITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
           +TEPDVVSW+ERI AA D +EAF LF+ +   + ++NEY +IN+LS++   ++L++G+QI
Sbjct: 280 MTEPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQI 339

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
           Q  C K G++ V S+ NALI MYGKCG++  AR IFD ++  DSVSWNS+IAGY+ENG  
Sbjct: 340 QGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLM 399

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            QAL +F  M ++ L PN YT+ASILE  +NS   +QAMQ+HS+I+K GF++DDSM+SCL
Sbjct: 400 KQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCL 459

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           IT YGKCN + ESKRV S+I + N +H+NA+A+ LV+A CHA+AL+L++T W   +EV+ 
Sbjct: 460 ITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDC 519

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T SIVLKAC A+TDLE G+ IH +ALK+   QD FVESAVID+YCKCGT+++A + F  
Sbjct: 520 ITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMN 579

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           + +++L  WNAM+MGYAQHGCYHEV  LFNKM + G++PDEITYL VL SCCHAGLV EA
Sbjct: 580 VSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEA 639

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
            TYLS M +LHG++P LEHYAC++DL GRVGLLE AK TIDQMPI PDA IWQ LLS C 
Sbjct: 640 HTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCN 699

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I+GN+DLG +A  KL+ELQP+N+S YVLLSNLYASAG WN VGKLR+ MK+K +CKEPG 
Sbjct: 700 IHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGS 759

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAKL 760
           SWI V G  H+F+A D+SH +SKEIY +L +LYE M A+  L
Sbjct: 760 SWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYL 801



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
           + H++AL+  +T+      V    +   L+A A++         + L LK+ +  D F+ 
Sbjct: 5   ATHSDALQSIKTL------VLKRLYPQALRASASLLHPPLTDQSYALFLKSGFALDAFLS 58

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           S +++ +   G    A+R            WN+++ GYA+      V +LFN + + G+ 
Sbjct: 59  SFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLS 118

Query: 577 PDEITYLAVLTSC 589
           PDE +  +++  C
Sbjct: 119 PDEFSLSSLVKGC 131


>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
 gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/553 (61%), Positives = 434/553 (78%)

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLF 264
           +GFL G   H +NA+M++Y RCG+++DA+K+FDEI EPDVVSW+ERI  A DG EA  LF
Sbjct: 1   MGFLRGSSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELF 60

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + +      +NEYT+IN+LS +GG + L AGKQIQA C+K G+ +VVS+ NAL+SMYGKC
Sbjct: 61  RIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKC 120

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           GQ+ DA  +F  +I +DSVSWNS+I+  SENGF NQAL++F  M E SL P  +T+ASIL
Sbjct: 121 GQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASIL 180

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           EAVSNS + KQ +Q+HS ++K GF+ D SMISCLIT YG+CN+++ESKRV +EIDK N V
Sbjct: 181 EAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLV 240

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
           H+N + +  V A  + +AL LY+TIW   R+V+  TFSI+LKAC+A+TD++ G+A+H L 
Sbjct: 241 HLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLV 300

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           LK  +DQD FVES+VID+YCKCG+I  A++AFR    +SLA WNAMMMGYA HGCY EV 
Sbjct: 301 LKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVF 360

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           +LFNKMS+FG++PDEITYL VL+SCCH GLV+EAR YL  M +LHG+IP LEHYAC++DL
Sbjct: 361 DLFNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDL 420

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGRVGLLE AK TID MPI PD HIWQ LLSAC I+G+++LG +A  KLLE+ P+NES Y
Sbjct: 421 LGRVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAY 480

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           +LLSNLYAS GMWN VG+LRKEMKEK L KEPG SWI VG  +H F+  D+SH QSKEIY
Sbjct: 481 ILLSNLYASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQVGRKSHTFFVNDTSHPQSKEIY 540

Query: 745 KELIKLYEHMVAT 757
            ELI+LY+ ++ +
Sbjct: 541 AELIRLYKQVIVS 553



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/444 (21%), Positives = 203/444 (45%), Gaps = 23/444 (5%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
            S  ++S + +      A +   +    D++++   I   +       A++LF  +   G
Sbjct: 11  FSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTAS---DGHEAVELFRIVLSLG 67

Query: 77  LRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           L  + +T  +++   G    L   + +  +C K G+   V + +  +  Y K G+I  A 
Sbjct: 68  LDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDAC 127

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SF 190
             F + +  D+V++ +++     NG  +++ EVF +MR L L+    +L ++L A   S 
Sbjct: 128 RVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSN 187

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           + K+  QIH   VK GF+  V   + + ++  Y RC    ++ ++F EI + ++V  +  
Sbjct: 188 NTKQVIQIHSLVVKCGFMFDVS--MISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTM 245

Query: 251 IAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          +A  L++ +     +++  T   +L +      ++ G+ + +   K GF
Sbjct: 246 ITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGF 305

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
            +   + +++I +Y KCG +  A   F         +WN+M+ GY+ +G + +  D+F  
Sbjct: 306 DQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNK 365

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM-----ISCLITTY 422
           M +F + P+  T   +L +  +   +K+A     H + S F L   +      +C+I   
Sbjct: 366 MSQFGIEPDEITYLGVLSSCCHGGLVKEA----RHYLDSMFELHGIIPHLEHYACMIDLL 421

Query: 423 GKCNALNESKRVLSEIDKKNAVHI 446
           G+   L ++K+ +  +  +  VHI
Sbjct: 422 GRVGLLEDAKKTIDHMPIQPDVHI 445



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 7/262 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+SL++K G   D  + + LI+ + +      + R   +    +++  N +I+   R  
Sbjct: 194 QIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAG 253

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL L+  +     + D+ TFS ++KAC ++ + ++   VH + LK GF    ++ S
Sbjct: 254 YYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVES 313

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G I  AE  FR        A+ AM+ GY  +G + +  ++F +M   G+E 
Sbjct: 314 SVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEP 373

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKM 235
           +E +   VL +       ++   +   +  L G+  HL +   +++L  R G   DA K 
Sbjct: 374 DEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKT 433

Query: 236 FDEIT-EPDVVSWSERIAAACD 256
            D +  +PDV  W + + +AC+
Sbjct: 434 IDHMPIQPDVHIW-QILLSACN 454



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/367 (21%), Positives = 170/367 (46%), Gaps = 13/367 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI +L  K G+     +S  L+S + K      A R  ++   RD +++N+LIS  +   
Sbjct: 93  QIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENG 152

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIV---HGVCLKLGFSSRVYLVS 117
               AL++F ++R   L+P   T +S+++A  +    + V   H + +K GF   V ++S
Sbjct: 153 FVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMIS 212

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y +   +  ++  F +   ++ V    M+  +V  G +  +  ++  + SL  ++
Sbjct: 213 CLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKV 272

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  + + +L    A  D++ G  +H   +K GF     + + ++++++Y +CG    A K
Sbjct: 273 DSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQD--SFVESSVIDIYCKCGSIGQAEK 330

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F   +   + +W+  +   A  G   E F LF  +     + +E T + +LSS     +
Sbjct: 331 AFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSCCHGGL 390

Query: 292 LRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           ++  +      +++ G +  +     +I + G+ G + DA+   D++  +  V  W  ++
Sbjct: 391 VKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQILL 450

Query: 350 AGYSENG 356
           +  + +G
Sbjct: 451 SACNIHG 457


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/763 (32%), Positives = 421/763 (55%), Gaps = 11/763 (1%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            +I+ L +  G + D  + T L + F +  D   A + L    +RD++ YNALI+ LA+  
Sbjct: 305  RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG 364

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
                A + + ++R  G+  +  T+ S++ AC +   L   E++H    ++G SS V + +
Sbjct: 365  HYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGN 424

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I  YA+ G++  A   F      D +++ A++ GY    +  ++ +++ +M+S G++ 
Sbjct: 425  SLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKP 484

Query: 178  NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
               +   +L A   S    +G+ IH   ++ G  S    HL NA+MN+Y RCG  ++A  
Sbjct: 485  GRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSN--GHLANALMNMYRRCGSIMEAQN 542

Query: 235  MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            +F+     D++SW+  IA  A  G    A+ LF +++    + ++ T  ++L        
Sbjct: 543  VFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEA 602

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L  G+QI     + G    V++GNALI+MY +CG + DA  +F  L  ++ +SW +MI G
Sbjct: 603  LELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGG 662

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            +++ G   +A ++F  M      P   T +SIL+A  +S  L +  +V +HI+ SG+ LD
Sbjct: 663  FADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELD 722

Query: 412  DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
              + + LI+ Y K  ++ ++++V  ++  ++ +  N + +          AL+    +  
Sbjct: 723  TGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQE 782

Query: 472  SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                +N  +F  +L AC++ + LE+GK +H   +K +   D+ V +A+I MY KCG++E+
Sbjct: 783  QGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEE 842

Query: 532  AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            A+  F      ++  WNAM+  YAQHG   +  + FN M K G+KPD  T+ ++L++C H
Sbjct: 843  AQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNH 902

Query: 592  AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            +GLV E     S +   HGL P +EHY C+V LLGR G  + A+  I+QMP PPDA +W+
Sbjct: 903  SGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWE 962

Query: 652  SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +LL AC I+GN+ L   A +  L+L   N + YVLLSN+YA+AG W+DV K+R+ M+ + 
Sbjct: 963  TLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRG 1022

Query: 712  LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + KEPG SWI V    H F A D SH ++ EIY+EL +L   M
Sbjct: 1023 IRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEM 1065



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 183/757 (24%), Positives = 355/757 (46%), Gaps = 25/757 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ +++ G   D  LS  LI+ + K      A +       RD+I++N+LIS  A+  
Sbjct: 103 RIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQG 162

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A +LF+ ++  G  P   T+ S++ AC S  E E    +H   ++ G+     + +
Sbjct: 163 FKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN 222

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K  ++ SA   F      D V+Y  M+  Y      ++   +F +M S G+  
Sbjct: 223 SLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPP 282

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   +L A      + EG++IH   V  G  S +   +  A+  ++VRCG    A +
Sbjct: 283 DKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDI--RVGTALATMFVRCGDVAGAKQ 340

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
             +   + DVV ++  IAA        EAF  +  +R +   +N  T +++L++    + 
Sbjct: 341 ALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKA 400

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L AG+ I +   +VG    V IGN+LISMY +CG +  AR +F+ +  +D +SWN++IAG
Sbjct: 401 LGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAG 460

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+      +A+ ++  M    + P   T   +L A +NS +      +H  I++SG   +
Sbjct: 461 YARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSN 520

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y +C ++ E++ V      ++ +  N++ +       +  A +L+  +  
Sbjct: 521 GHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKK 580

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              E +  TF+ VL  C     LE G+ IH L +++    D+ + +A+I+MY +CG+++D
Sbjct: 581 EGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQD 640

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A   F  +   ++  W AM+ G+A  G   +   LF +M   G KP + T+ ++L +C  
Sbjct: 641 AYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMS 700

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           +  + E +  ++ + +  G          ++    + G +  A+   D+MP   D   W 
Sbjct: 701 SACLDEGKKVIAHILN-SGYELDTGVGNALISAYSKSGSMTDARKVFDKMP-NRDIMSWN 758

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPD----NESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +++    Y    LG  A     ++Q      N+ ++V + N  +S     +  ++  E+
Sbjct: 759 KMIAG---YAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI 815

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            ++ +  +     + VG      YA   S  +++E++
Sbjct: 816 VKRKMQGD-----VRVGAALISMYAKCGSLEEAQEVF 847



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 253/515 (49%), Gaps = 11/515 (2%)

Query: 84  FSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +  LV+ C    SL E + +H   ++ G    ++L +  I  Y K   +  A   F    
Sbjct: 85  YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQ 197
             D +++ +++  Y   G   K+ ++F EM++ G   ++ +  ++L A     +++ G++
Sbjct: 145 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKK 204

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           IH   ++ G+       + N+++N+Y +C     A ++F  I   DVVS++  +      
Sbjct: 205 IHSKIIEAGYQRDP--RVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262

Query: 258 V---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               E  GLF  +       ++ T INLL +     +L  GK+I       G    + +G
Sbjct: 263 AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVG 322

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            AL +M+ +CG V  A+   +    +D V +N++IA  +++G + +A + +  M    ++
Sbjct: 323 TALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVV 382

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            N  T  S+L A S SK+L     +HSHI + G   D  + + LI+ Y +C  L  ++ +
Sbjct: 383 MNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAREL 442

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
            + + K++ +  NA+ +         EA++LY+ +     +    TF  +L AC   +  
Sbjct: 443 FNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAY 502

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             GK IH   L++    +  + +A+++MY +CG+I +A+  F       +  WN+M+ G+
Sbjct: 503 SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGH 562

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           AQHG Y     LF +M K G++PD+IT+ +VL  C
Sbjct: 563 AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC 597



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 209/402 (51%), Gaps = 5/402 (1%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           E ++IH   V+ G    +   L+N ++N+YV+C    DA ++F ++   DV+SW+  I+ 
Sbjct: 100 EAKRIHAQMVEAGVGPDI--FLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISC 157

Query: 254 -ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A  G +  AF LF++++   F  ++ T I++L++      L  GK+I +   + G+   
Sbjct: 158 YAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRD 217

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             + N+L++MYGKC  +  AR +F  +  +D VS+N+M+  Y++  +  + + +F  M  
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSS 277

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + P+  T  ++L+A +    L +  ++H   +  G   D  + + L T + +C  +  
Sbjct: 278 EGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAG 337

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +K+ L     ++ V  NAL + L     + EA E Y  +      +N +T+  VL AC+ 
Sbjct: 338 AKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACST 397

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
              L  G+ IH    +  +  D+ + +++I MY +CG +  A+  F  + +  L  WNA+
Sbjct: 398 SKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAI 457

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           + GYA+     E   L+ +M   GVKP  +T+L +L++C ++
Sbjct: 458 IAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNS 499



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 190/384 (49%), Gaps = 2/384 (0%)

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + N    ++L+ +   +R L   K+I A   + G    + + N LI+MY KC  V+DA  
Sbjct: 79  ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  +  +D +SWNS+I+ Y++ GF  +A  +F  M     IP+  T  SIL A  +   
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L+   ++HS II++G+  D  + + L+  YGKC  L  +++V S I +++ V  N +  +
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
               +   E + L+  +       +  T+  +L A    + L++GK IH LA+    + D
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           I V +A+  M+ +CG +  AK+A        +  +NA++   AQHG Y E    + +M  
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GV  +  TYL+VL +C  +  +       S +S++ G    ++    ++ +  R G L 
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV-GHSSDVQIGNSLISMYARCGDLP 437

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSA 656
            A+   + MP   D   W ++++ 
Sbjct: 438 RARELFNTMP-KRDLISWNAIIAG 460


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/763 (33%), Positives = 421/763 (55%), Gaps = 11/763 (1%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            +I+ L ++ G + D  + T L++   +  D   A +    T +RD++ YNALI+ LA+  
Sbjct: 250  RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHG 309

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
             +  A + + R+R  G+  +  T+ S++ AC +   L+  +++H    + G SS V + +
Sbjct: 310  HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN 369

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I  YA+ G++  A   F      D +++ A++ GY    +  ++  ++ +M+S G++ 
Sbjct: 370  ALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429

Query: 178  NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
               +   +L A   S    +G+ IH   ++ G  S    HL NA+MN+Y RCG  ++A  
Sbjct: 430  GRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSN--GHLANALMNMYRRCGSLMEAQN 487

Query: 235  MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            +F+     DV+SW+  IA  A  G    A+ LF++++  + + +  T  ++LS       
Sbjct: 488  VFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEA 547

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L  GKQI     + G    V++GNALI+MY +CG + DAR++F  L  +D +SW +MI G
Sbjct: 548  LELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGG 607

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++ G   +A+++F  M      P   T +SIL+  ++S  L +  +V ++I+ SG+ LD
Sbjct: 608  CADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELD 667

Query: 412  DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
              + + LI+ Y K  ++ +++ V  ++  ++ V  N + +          A+E    +  
Sbjct: 668  TGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQE 727

Query: 472  SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                 N  +F  +L AC++ + LE+GK +H   +K +   D+ V +A+I MY KCG+  +
Sbjct: 728  QDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGE 787

Query: 532  AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            A+  F  I   ++  WNAM+  YAQHG   +    FN M K G+KPD  T+ ++L++C H
Sbjct: 788  AQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNH 847

Query: 592  AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            AGLV E     S M   +G++P +EHY C+V LLGR    + A+  I+QMP PPDA +W+
Sbjct: 848  AGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWE 907

Query: 652  SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +LL AC I+GNI L   A +  L+L   N + Y+LLSN+YA+AG W+DV K+R+ M+ + 
Sbjct: 908  TLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRG 967

Query: 712  LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + KEPG SWI V    H F A D SH ++ EIY EL +L   M
Sbjct: 968  IRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEM 1010



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 182/699 (26%), Positives = 346/699 (49%), Gaps = 15/699 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+S +IK G+  DP +  +L+S + K  D  RA +       RD+++YN ++   A+  
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
                L LF ++  +G+ PD  T+ +L+ A  +   L E + +H + ++ G +S + + +
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT 268

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +    + G++ SA+  F+   D D V Y A++     +G   ++ E +  MRS G+ L
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +  ++L A   S  ++ G+ IH    + G  S V   + NA++++Y RCG    A +
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV--QIGNALISMYARCGDLPKARE 386

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + D++SW+  IA      D  EA  L+K ++    +    T ++LLS+      
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              GK I     + G      + NAL++MY +CG + +A+++F+    +D +SWNSMIAG
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAG 506

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++++G +  A  +F  M    L P+  T AS+L    N ++L+   Q+H  I +SG  LD
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            ++ + LI  Y +C +L +++ V   +  ++ +   A+           +A+EL+  +  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                  STFS +LK C +   L++GK +    L + Y+ D  V +A+I  Y K G++ D
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F K+    +  WN ++ GYAQ+G          +M +  V P++ +++++L +C  
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
              + E +   + +     L   +   A ++ +  + G    A+   D + I  +   W 
Sbjct: 747 FSALEEGKRVHAEIVK-RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWN 804

Query: 652 SLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLS 688
           ++++A   +G  +  LG     +   ++PD  +   +LS
Sbjct: 805 AMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILS 843



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 188/762 (24%), Positives = 356/762 (46%), Gaps = 25/762 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ +++     D  LS  LI+ + K      A +   +   RD+I++N+LIS  A+  
Sbjct: 48  RIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQG 107

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A +LF+ ++  G  P+  T+ S++ AC S   L+  + +H   +K G+     + +
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G++  A   F      D V+Y  M+  Y       +   +F +M S G+  
Sbjct: 168 SLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   +L A      + EG++IH   V+ G  S +   +  A++ + VRCG    A +
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI--RVGTALVTMCVRCGDVDSAKQ 285

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F    + DVV ++  IAA       VEAF  +  +R +   +N  T +++L++    + 
Sbjct: 286 AFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKA 345

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L AGK I +   + G    V IGNALISMY +CG +  AR +F  +  +D +SWN++IAG
Sbjct: 346 LEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAG 405

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+      +A+ ++  M    + P   T   +L A +NS +      +H  I++SG   +
Sbjct: 406 YARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSN 465

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y +C +L E++ V      ++ +  N++ +       +  A +L++ +  
Sbjct: 466 GHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQN 525

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              E +  TF+ VL  C     LE GK IH    ++    D+ + +A+I+MY +CG+++D
Sbjct: 526 EELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQD 585

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F  +    +  W AM+ G A  G   +   LF +M   G +P + T+ ++L  C  
Sbjct: 586 ARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTS 645

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           +  + E +  ++ + +  G          ++    + G +  A+   D+MP   D   W 
Sbjct: 646 SACLDEGKKVIAYILN-SGYELDTGVGNALISAYSKSGSMTDAREVFDKMP-SRDIVSWN 703

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPD----NESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +++    Y    LG  A     ++Q      N+ ++V L N  +S     +  ++  E+
Sbjct: 704 KIIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEI 760

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
            ++ L  +     + VG      YA   S  +++E++  +I+
Sbjct: 761 VKRKLQGD-----VRVGAALISMYAKCGSQGEAQEVFDNIIE 797



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 285/588 (48%), Gaps = 13/588 (2%)

Query: 83  TFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           T+ +L++ C     L E + +H   ++      ++L +  I  Y K   ++ A   F++ 
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGE 196
              D +++ +++  Y   G   K+ ++F EM++ G   N+ +  ++L A +   +++ G+
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           +IH   +K G+       + N+++++Y +CG    A ++F  I+  DVVS++  +     
Sbjct: 149 KIHSQIIKAGYQRDP--RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206

Query: 257 GV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
                E  GLF  +       ++ T INLL +     +L  GK+I     + G    + +
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           G AL++M  +CG V+ A+  F     +D V +N++IA  +++G   +A + +  M    +
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             N  T  SIL A S SK+L+    +HSHI + G   D  + + LI+ Y +C  L +++ 
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           +   + K++ +  NA+ +         EA+ LY+ +     +    TF  +L ACA  + 
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
              GK IH   L++    +  + +A+++MY +CG++ +A+  F       +  WN+M+ G
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAG 506

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           +AQHG Y     LF +M    ++PD IT+ +VL+ C +   +   +     +++  GL  
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-SGLQL 565

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            +     ++++  R G L+ A+     +    D   W +++  C   G
Sbjct: 566 DVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQG 612



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 119/241 (49%), Gaps = 7/241 (2%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E   +T+  +L+ C     L + K IH   ++A    DIF+ + +I+MY KC ++ DA +
Sbjct: 24  ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAG 593
            F+++ R  +  WN+++  YAQ G   +   LF +M   G  P++ITY+++LT+C   A 
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           L    + +   +   +   P++++   ++ + G+ G L  A+     +  P D   + ++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTM 200

Query: 654 LS--ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           L   A   Y    LGL        + PD + TY+ L + + +  M ++  ++ K   E+ 
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPD-KVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259

Query: 712 L 712
           L
Sbjct: 260 L 260


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/763 (32%), Positives = 433/763 (56%), Gaps = 12/763 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +IY+ + K+G   D  +  TLI+ + K  +   A +   D + +D+ ++N L+ G  +  
Sbjct: 131 RIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               A KL +++    ++PD  TF S++ AC    ++ +   ++ + LK G+ + +++ +
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT 250

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  + K G+I  A   F +    D V +T+M+ G   +G F ++  +F  M   G++ 
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +  ++L A      +++G+++H    +VG+ + +  ++  AI+++Y +CG   DA++
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI--YVGTAILSMYTKCGSMEDALE 368

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   +VVSW+  IA  A  G   EAF  F  +  +  + N  T +++L +      
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ G+QIQ    + G+     +  AL+SMY KCG + DA  +F+ +  ++ V+WN+MI  
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITA 488

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++  ++ AL  F  +L+  + PN  T  SIL    +S SL+    VH  I+K+G   D
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L++ +  C  L  +K + +++ K++ V  N + +  V    +  A + ++ +  
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  TF+ +L ACA+   L +G+ +H L  +A +D D+ V + +I MY KCG+IED
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A + F K+ + ++  W +M+ GYAQHG   E   LF +M + GVKPD IT++  L++C H
Sbjct: 669 AHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAH 728

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGL+ E   +   M + + + P++EHY C+VDL GR GLL  A   I +M + PD+ +W 
Sbjct: 729 AGLIEEGLHHFQSMKEFN-IEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWG 787

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC ++ N++L   A  K LEL P++   +V+LSN+YA+AGMW +V K+RK M ++ 
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRG 847

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + K+PG SWI V G  H FY+ D +H Q++EI+ EL +L+  M
Sbjct: 848 VVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEM 890



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/649 (27%), Positives = 340/649 (52%), Gaps = 34/649 (5%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           +D    NA+++ L++  Q   A+++ +R+    ++    T+S+L++ C    +L + E +
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           +    K G    +++ +  I  YAK G  +SA+  F D  + D  ++  ++ GYV +G +
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNN 217
           +++ ++  +M    ++ ++ +  ++L A  D   V +G +++   +K G+ + +   +  
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDL--FVGT 250

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQI 274
           A++N++++CG   DA K+FD +   D+V+W+  I   A  G   +A  LF+ +     Q 
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           ++   ++LL +      L  GK++ A   +VG+   + +G A++SMY KCG + DA  +F
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           D +  ++ VSW +MIAG++++G  ++A   F  M+E  + PN  T  SIL A S+  +LK
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  Q+  HII++G+  DD + + L++ Y KC +L ++ RV  +I K+N V  NA+ +  V
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               +  AL  ++ +     + N STF+ +L  C +   LE GK +H L +KA  + D+ 
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH 550

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++ M+  CG +  AK  F  + +  L  WN ++ G+ QHG      + F  M + G
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC-------IVDLLGR 627
           +KPD+IT+  +L +C     + E R        LH LI +   + C       ++ +  +
Sbjct: 611 IKPDKITFTGLLNACASPEALTEGRR-------LHALITEAA-FDCDVLVGTGLISMYTK 662

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
            G +E A     ++P   + + W S+++    +G        G + LEL
Sbjct: 663 CGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGR-------GKEALEL 703



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 4/251 (1%)

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           D K+    NA+ + L  A    EA+++   +  S  ++   T+S +L+ C    +L  G+
Sbjct: 71  DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGE 130

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            I+    K+    DIF+ + +I+MY KCG    AK+ F  +    +  WN ++ GY QHG
Sbjct: 131 RIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
            Y E   L  +M +  VKPD+ T++++L +C  A  V + R   + +    G    L   
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVG 249

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--L 676
             ++++  + G +  A    D +P   D   W S+++    +G          ++ E  +
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPT-RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308

Query: 677 QPDNESTYVLL 687
           QPD  +   LL
Sbjct: 309 QPDKVAFVSLL 319


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/763 (32%), Positives = 433/763 (56%), Gaps = 12/763 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +IY+ + K+G   D  +  TLI+ + K  +   A +   D + +D+ ++N L+ G  +  
Sbjct: 131 RIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               A KL +++    ++PD  TF S++ AC    ++ +   ++ + LK G+ + +++ +
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT 250

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  + K G+I  A   F +    D V +T+M+ G   +G F ++  +F  M   G++ 
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +  ++L A      +++G+++H    +VG+ + +  ++  AI+++Y +CG   DA++
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI--YVGTAILSMYTKCGSMEDALE 368

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   +VVSW+  IA  A  G   EAF  F  +  +  + N  T +++L +      
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ G+QIQ    + G+     +  AL+SMY KCG + DA  +F+ +  ++ V+WN+MI  
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITA 488

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++  ++ AL  F  +L+  + PN  T  SIL    +S SL+    VH  I+K+G   D
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L++ +  C  L  +K + +++ K++ V  N + +  V    +  A + ++ +  
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  TF+ +L ACA+   L +G+ +H L  +A +D D+ V + +I MY KCG+IED
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A + F K+ + ++  W +M+ GYAQHG   E   LF +M + GVKPD IT++  L++C H
Sbjct: 669 AHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAH 728

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGL+ E   +   M + + + P++EHY C+VDL GR GLL  A   I +M + PD+ +W 
Sbjct: 729 AGLIEEGLHHFQSMKEFN-IEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWG 787

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC ++ N++L   A  K LEL P++   +V+LSN+YA+AGMW +V K+RK M ++ 
Sbjct: 788 ALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRG 847

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + K+PG SWI V G  H FY+ D +H Q++EI+ EL +L+  M
Sbjct: 848 VVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEM 890



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/649 (27%), Positives = 340/649 (52%), Gaps = 34/649 (5%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           +D    NA+++ L++  Q   A+++ +R+    ++    T+S+L++ C    +L + E +
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           +    K G    +++ +  I  YAK G  +SA+  F D  + D  ++  ++ GYV +G +
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNN 217
           +++ ++  +M    ++ ++ +  ++L A  D   V +G +++   +K G+ + +   +  
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDL--FVGT 250

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQI 274
           A++N++++CG   DA K+FD +   D+V+W+  I   A  G   +A  LF+ +     Q 
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           ++   ++LL +      L  GK++ A   +VG+   + +G A++SMY KCG + DA  +F
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           D +  ++ VSW +MIAG++++G  ++A   F  M+E  + PN  T  SIL A S+  +LK
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  Q+  HII++G+  DD + + L++ Y KC +L ++ RV  +I K+N V  NA+ +  V
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               +  AL  ++ +     + N STF+ +L  C +   LE GK +H L +KA  + D+ 
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH 550

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++ M+  CG +  AK  F  + +  L  WN ++ G+ QHG      + F  M + G
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC-------IVDLLGR 627
           +KPD+IT+  +L +C     + E R        LH LI +   + C       ++ +  +
Sbjct: 611 IKPDKITFTGLLNACASPEALTEGRR-------LHALITEAA-FDCDVLVGTGLISMYTK 662

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
            G +E A     ++P   + + W S+++    +G        G + LEL
Sbjct: 663 CGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGR-------GKEALEL 703



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 4/251 (1%)

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           D K+    NA+ + L  A    EA+++   +  S  ++   T+S +L+ C    +L  G+
Sbjct: 71  DIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGE 130

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            I+    K+    DIF+ + +I+MY KCG    AK+ F  +    +  WN ++ GY QHG
Sbjct: 131 RIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHG 190

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
            Y E   L  +M +  VKPD+ T++++L +C  A  V + R   + +    G    L   
Sbjct: 191 LYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVG 249

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--L 676
             ++++  + G +  A    D +P   D   W S+++    +G          ++ E  +
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPT-RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308

Query: 677 QPDNESTYVLL 687
           QPD  +   LL
Sbjct: 309 QPDKVAFVSLL 319


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/761 (33%), Positives = 422/761 (55%), Gaps = 11/761 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  I +G+     +   LI  + K      A +     Q RD +++ A++SGL++  
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF ++   G+ P  + FSS++ AC  ++     E +HG+ LK GFS   Y+ +
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCN 310

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y++ G  + AE  F   L  D V+Y +++ G    G  DK+ E+F +M    L+ 
Sbjct: 311 ALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKP 370

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A   V     G+Q H + +K G  S +   L  A+++LYV+C     A +
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDII--LEGALLDLYVKCSDIKTAHE 428

Query: 235 MFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F      +VV W+  + A    D + E+F +F  ++    + N++T  ++L +    R 
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI     K GF   V + + LI MY K G+++ A  IF  L  KD VSW +MIAG
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAG 548

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+++  F +AL++F  M +  +  +    AS + A +  ++L Q  Q+H+    SG+  D
Sbjct: 549 YAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDD 608

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L++ Y +C  + ++     +I  K+ +  N+L S    +    EAL L+  +  
Sbjct: 609 LSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSK 668

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           + +E+N  TF   + A A + +++ GK IH + +K  +D +  V + +I +Y KCG I+D
Sbjct: 669 AGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDD 728

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+R F ++   +   WNAM+ GY+QHG   +  +LF  M + GV P+ +T++ VL++C H
Sbjct: 729 AERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSH 788

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E   Y   M ++HGL+P+ EHYAC+VDLLGR GLL  A+  +++MPI PDA + +
Sbjct: 789 VGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCR 848

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NID+G  A S LLEL+P + +TYVLLSN+YA  G W    + R+ MK++ 
Sbjct: 849 TLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRG 908

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + KEPG SWI V    H F+AGD  H    +IY+ L  L E
Sbjct: 909 VKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNE 949



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 179/727 (24%), Positives = 349/727 (48%), Gaps = 29/727 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  ++K G   + +L   L+  +  F D   A     +   R +  +N ++       
Sbjct: 89  KLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGK 148

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG----SLQENEIVHGVCLKLGFSSRVYLV 116
            +G  L LF R+  + ++PD  T++ +++ CG         E +H   +  G+ + +++ 
Sbjct: 149 MAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVC 208

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y K+G + SA+  F      D+V++ AM+ G   +G  +++  +F +M + G+ 
Sbjct: 209 NPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVY 268

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              +  ++VL A   V   K GEQ+HG  +K GF   +  ++ NA++ LY R G  + A 
Sbjct: 269 PTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF--SLETYVCNALVTLYSRLGNFIPAE 326

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ + + D VS++  I+         +A  LFK +  +  + +  T+ +LLS+     
Sbjct: 327 QVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQ  ++  K G    + +  AL+ +Y KC  +  A   F     ++ V WN M+ 
Sbjct: 387 ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y      N++  +F  M    + PN +T  SIL   S+ +++    Q+H+ ++K+GF  
Sbjct: 447 AYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQF 506

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S LI  Y K   L+ + ++   + +K+ V   A+ +        AEAL L++ + 
Sbjct: 507 NVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQ 566

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 +   F+  + ACA +  L QG+ IH  A  + Y  D+ V +A++ +Y +CG + 
Sbjct: 567 DQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVR 626

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           DA  AF KI       WN+++ G+AQ G   E  +LF++MSK G + +  T+   +++  
Sbjct: 627 DAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAA 686

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIP 644
           +   V+  +        +H +I +  H +       ++ L  + G ++ A+    +MP  
Sbjct: 687 NVANVKLGK-------QIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEK 739

Query: 645 PDAHIWQSLLSACTIYGN--IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
            +   W ++L+  + +G+    L L    K L + P N  T+V + +  +  G+ ++  K
Sbjct: 740 NEIS-WNAMLTGYSQHGHGFKALSLFEDMKQLGVLP-NHVTFVGVLSACSHVGLVDEGIK 797

Query: 703 LRKEMKE 709
             + M+E
Sbjct: 798 YFQSMRE 804



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 208/400 (52%), Gaps = 6/400 (1%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE---R 250
           +G ++HG  +K+GF + V   L   +M+LY+  G    AV +FDE+    +  W++   R
Sbjct: 86  DGWKLHGKILKMGFCAEVV--LCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHR 143

Query: 251 IAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI-LRAGKQIQAFCYKVGFME 309
             A        GLF+ +     + +E T   +L   GG  +     ++I A     G+  
Sbjct: 144 FVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYEN 203

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + N LI +Y K G +N A+ +FD L  +DSVSW +M++G S++G   +A+ +FC M 
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH 263

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              + P  Y  +S+L A +  +  K   Q+H  ++K GF L+  + + L+T Y +     
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +++V + + +++ V  N+L S L       +ALEL++ +   C + +  T + +L AC+
Sbjct: 324 PAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           ++  L  GK  H  A+KA    DI +E A++D+Y KC  I+ A   F     +++  WN 
Sbjct: 384 SVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNV 443

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           M++ Y      +E   +F +M   G++P++ TY ++L +C
Sbjct: 444 MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 210/494 (42%), Gaps = 47/494 (9%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N  T + LL           G ++     K+GF   V +   L+ +Y   G ++ A ++F
Sbjct: 67  NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK-SL 393
           D +  +    WN ++  +       + L +F  ML+  + P+  T A +L          
Sbjct: 127 DEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPF 186

Query: 394 KQAMQVHSHIIKSGFLLDDSMISC--LITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
               ++H+  I  G+  ++S+  C  LI  Y K   LN +K+V   + K+++V   A+ S
Sbjct: 187 HCVEKIHARTITHGY--ENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLS 244

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
            L  + C  EA+ L+  +  S        FS VL AC  +   + G+ +H L LK  +  
Sbjct: 245 GLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL 304

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           + +V +A++ +Y + G    A++ F  + +     +N+++ G +Q G   +   LF KM 
Sbjct: 305 ETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC 364

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREART-----------------------YLSCMSDL 608
              +KPD +T  ++L++C   G +   +                        Y+ C SD+
Sbjct: 365 LDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC-SDI 423

Query: 609 HG-----LIPQLEHYACIVDLLGRVGLLEGAK-----MTIDQMP-IPPDAHIWQSLLSAC 657
                  L  + E+      +L   GLL+         T  QM  I P+   + S+L  C
Sbjct: 424 KTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483

Query: 658 TIYGNIDLGLLAGSKLLELQPD-NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           +    +DLG    +++L+     N     +L ++YA  G  +   K+ + +KEK +    
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV--- 540

Query: 717 GYSWI-HVGGYTHH 729
             SW   + GY  H
Sbjct: 541 --SWTAMIAGYAQH 552



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 159/388 (40%), Gaps = 20/388 (5%)

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA-GYSENGFFNQALDMFCHML 369
           ++I     S+  K  Q     SIF    F+  +  N+ ++  YS +      ++    M 
Sbjct: 3   ITIKTYFKSIVNKIKQFRPVVSIF--FFFQKFLEHNTALSYAYSNDEGEANGINFLHLME 60

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  +  N  T   +L+   +S       ++H  I+K GF  +  +   L+  Y     L+
Sbjct: 61  ERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLD 120

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +  V  E+  +     N +    V        L L+R +     + +  T++ VL+ C 
Sbjct: 121 GAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG 180

Query: 490 AM-TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
                    + IH   +   Y+  +FV + +ID+Y K G +  AK+ F  + +     W 
Sbjct: 181 GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWV 240

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           AM+ G +Q GC  E   LF +M   GV P    + +VL++C      +           L
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGE-------QL 293

Query: 609 HGLIPQ----LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           HGL+ +    LE Y C  +V L  R+G    A+   + M +  D   + SL+S  +  G 
Sbjct: 294 HGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLISGLSQQGY 352

Query: 663 IDLGLLAGSKLLE--LQPDNESTYVLLS 688
            D  L    K+    L+PD  +   LLS
Sbjct: 353 SDKALELFKKMCLDCLKPDCVTVASLLS 380


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/760 (33%), Positives = 434/760 (57%), Gaps = 13/760 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ LIK G   DP L   L++ ++K   F  A + + ++   D++++++L+SG  +  
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL +F+ +   G++ + FTF S++KAC     L     VHG+ +  GF S  ++ +
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G +  +   F   ++ + V++ A+   YV +    ++  +F EM   G+  
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NEFS++ +L A   ++EG+   +IHG  +K+G    +     NA++++Y + G+   AV 
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGL--DLDQFSANALVDMYSKAGEIEGAVA 239

Query: 235 MFDEITEPDVVSWSERIAAA----CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F +I  PDVVSW+  IA      C+ + A  L  +++ +  + N +T+ + L +     
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDL-ALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G+Q+ +   K+     +     L+ MY KC  ++DAR  +D +  KD ++WN++I+
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GYS+ G    A+ +F  M    +  N  T++++L++V++ +++K   Q+H+  IKSG   
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYS 418

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  +I+ L+ TYGKCN ++E+ ++  E   ++ V   ++ +         EAL+LY  + 
Sbjct: 419 DFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQ 478

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +  + +    S +L ACA ++  EQGK +H  A+K  +  DIF  +++++MY KCG+IE
Sbjct: 479 DADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIE 538

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           DA RAF +I    +  W+AM+ GYAQHG   E   LFN+M + GV P+ IT ++VL +C 
Sbjct: 539 DADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACN 598

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGLV E + Y   M  + G+ P  EHYAC++DLLGR G L  A   ++ +P   D  +W
Sbjct: 599 HAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVW 658

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL A  I+ NI+LG  A   L +L+P+   T+VLL+N+YASAGMW +V K+RK MK+ 
Sbjct: 659 GALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDS 718

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + KEPG SWI +    + F  GD SHS+S EIY +L +L
Sbjct: 719 KVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQL 758



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 145/278 (52%), Gaps = 14/278 (5%)

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           M++H+H+IK GF  D S+ + L+T Y KC     +++++ E  + + V  ++L S  V  
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EAL ++  +     + N  TF  VLKAC+   DL  G+ +H +A+   ++ D FV 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           + ++ MY KCG ++D++R F  I   ++  WNA+   Y Q     E   LF +M + G+ 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ----LEHYA--CIVDLLGRVGL 630
           P+E +   +L +C  AGL             +HGL+ +    L+ ++   +VD+  + G 
Sbjct: 181 PNEFSISIILNAC--AGLQEG-----DLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGE 233

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           +EGA + + Q    PD   W ++++ C ++   DL L+
Sbjct: 234 IEGA-VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALM 270


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 429/764 (56%), Gaps = 17/764 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLA 57
           QI++ +I +G    P++   LI  ++K      A   F  LF    +D +++ A+ISGL+
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF---LKDSVSWVAMISGLS 189

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
           +  +   A+ LF ++    + P  + FSS++ AC  ++     E +HG  +K G SS  +
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y++ G +++AE  F      D ++Y +++ G    G  D++ ++F +M+   
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309

Query: 175 LELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +  ++ ++L A   V    +G+Q+H + +K+G  S +   +  ++++LYV+C     
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI--IEGSLLDLYVKCFDIET 367

Query: 232 AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A + F      +VV W+  + A     +  E++ +F  ++      N+YT  ++L +   
Sbjct: 368 AHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTS 427

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+QI     K GF   V + + LI MY K G+++ AR I   L  +D VSW +M
Sbjct: 428 LGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAM 487

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY+++  F +AL +F  M    +  +    +S + A +  ++L Q  Q+H+    SG+
Sbjct: 488 IAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGY 547

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D S+ + L++ Y +C    ++     +ID K+ +  NAL S    +    EAL+++  
Sbjct: 548 SEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQ 607

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +  E N  TF   + A A   +++QGK IH + +K  YD +    + +I +Y KCG+
Sbjct: 608 MNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGS 667

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           IEDAKR F ++   ++  WNAM+ GY+QHG   E  +LF +M + G+ P+ +T++ VL++
Sbjct: 668 IEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSA 727

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV E  +Y   MS  HGL+P+ EHY C+VDLLGR  LL  A+  I++MPI PDA 
Sbjct: 728 CSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAM 787

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW++LLSACT++ NI++G  A   LLEL+P++ +TYVLLSN+YA +G W+   + R+ MK
Sbjct: 788 IWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMK 847

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           ++ + KEPG SWI V    H F+ GD  H  +++IY+ +  L E
Sbjct: 848 DRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNE 891



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 191/731 (26%), Positives = 358/731 (48%), Gaps = 22/731 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ + K+G   + +L + LI  +    +   A +   D  + ++  +N +ISGL    
Sbjct: 31  KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKK 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
            +   L LF  +  + + PD  TF+S+++AC       Q  E +H   +  GF S   + 
Sbjct: 91  LASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVC 150

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+K+G +  A++ F      D+V++ AM+ G   NG  D++  +F +M    + 
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLD 231
              +  ++VL A   +   K GEQ+HGF VK G  S   VC    NA++ LY R G  + 
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC----NALVTLYSRWGNLIA 266

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F ++   D +S++  I+          A  LF+ ++ +  + +  T+ +LLS+   
Sbjct: 267 AEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACAS 326

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                 GKQ+ ++  K+G    + I  +L+ +Y KC  +  A   F     ++ V WN M
Sbjct: 327 VGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVM 386

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  Y + G  +++  +F  M    L+PN YT  SIL   ++  +L    Q+H+ +IKSGF
Sbjct: 387 LVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGF 446

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + S LI  Y K   L+ ++ +L  + +++ V   A+ +        AEAL+L++ 
Sbjct: 447 QFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQE 506

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       +   FS  + ACA +  L QG+ IH  +  + Y +D+ + +A++ +Y +CG 
Sbjct: 507 MENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGR 566

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            +DA  AF KI       WNA++ G+AQ G   E   +F++M++ GV+ +  T+ + +++
Sbjct: 567 AQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSA 626

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
             +   +++ +  +  M    G   + E    ++ L  + G +E AK    +MP   +  
Sbjct: 627 TANTANIKQGKQ-IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVV 684

Query: 649 IWQSLLSACTI--YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND-VGKLRK 705
            W ++++  +   YG+  + L    K L L P N  T+V + +  +  G+ N+ +   R 
Sbjct: 685 SWNAMITGYSQHGYGSEAVSLFEEMKQLGLMP-NHVTFVGVLSACSHVGLVNEGLSYFRS 743

Query: 706 EMKEKFLCKEP 716
             KE  L  +P
Sbjct: 744 MSKEHGLVPKP 754



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 150/614 (24%), Positives = 281/614 (45%), Gaps = 18/614 (2%)

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +  +G+R +  T+  L + C   GSL + + +H    K GF     L S  I+ Y   GE
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL-- 186
           + +A   F D    +   +  ++ G +      +   +F  M +  +  +E +  +VL  
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 187 --GASFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
             G     +  EQIH   +  GF S   VCN L    ++LY + G    A  +F+ +   
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPL----IDLYSKNGHVDLAKLVFERLFLK 176

Query: 243 DVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D VSW   I+         EA  LF  +  +      Y   ++LS+     + + G+Q+ 
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
            F  K G      + NAL+++Y + G +  A  IF  +  +D +S+NS+I+G ++ GF +
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +AL +F  M    + P+  T+AS+L A ++  +  +  Q+HS++IK G   D  +   L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC  +  +       + +N V  N +          +E+  ++  +       N  
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T+  +L+ C ++  L+ G+ IH   +K+ +  +++V S +IDMY K G ++ A+   +++
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
             + +  W AM+ GY QH  + E   LF +M   G++ D I + + +++C     + + +
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
             +   S + G    L     +V L  R G  + A +  +++    D   W +L+S    
Sbjct: 537 Q-IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKID-AKDNISWNALISGFAQ 594

Query: 660 YGNIDLGLLAGSKL 673
            G+ +  L   S++
Sbjct: 595 SGHCEEALQVFSQM 608


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/763 (33%), Positives = 436/763 (57%), Gaps = 11/763 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K+G   DP +   LI+ ++K  +F  A + + ++   D+++++ALISG A+  
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G AL  F  +   G++ + FTFSS++KAC  +++  I   VHGV +  GF   V++ +
Sbjct: 137 LGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVAN 196

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  E + ++  F +  + + V++ A+   YV      ++  +F EM   G++ 
Sbjct: 197 TLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKP 256

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NEFSL++++ A     D   G+ IHG+ +K+G+     +   NA++++Y + G   DA+ 
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS--ANALVDMYAKVGDLADAIS 314

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F++I +PD+VSW+  IA         +A  L   ++ +    N +T+ + L +  G  +
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGL 374

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G+Q+ +   K+     + +   L+ MY KC  + DAR  F+ L  KD ++WN++I+G
Sbjct: 375 KELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 434

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS+     +AL +F  M +  +  N  T+++IL++ +  + +    QVH   +KSGF  D
Sbjct: 435 YSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 494

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +++ LI +YGKC+ + +++R+  E    + V   ++ +         EAL+L+  +  
Sbjct: 495 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 554

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + +    S +L ACA ++  EQGK +H   LK  +  DIF  +++++MY KCG+I+D
Sbjct: 555 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDD 614

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A RAF ++    +  W+AM+ G AQHG   +   LFN+M K GV P+ IT ++VL +C H
Sbjct: 615 AGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 674

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV EA+ Y   M +L G  P  EHYAC++DLLGR G +  A   +++MP   +A +W 
Sbjct: 675 AGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWG 734

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL A  I+ +++LG  A   L  L+P+   T+VLL+N+YASAG W +V ++R+ M++  
Sbjct: 735 ALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSK 794

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + KEPG SWI V    + F  GD SH +S+EIY +L +L + M
Sbjct: 795 VKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLM 837



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 279/557 (50%), Gaps = 11/557 (1%)

Query: 52  LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG 108
           LI  + +F Q      + + +      P + ++S L+  C    SL+    +H    K G
Sbjct: 27  LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
            S    + +  I  Y+K      A     +  + D V+++A++ GY  NG    +   F 
Sbjct: 87  LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146

Query: 169 EMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           EM  LG++ NEF+ ++VL A   VK+   G+Q+HG  V  GF   V   + N ++ +Y +
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDV--FVANTLVVMYAK 204

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINL 282
           C + LD+ ++FDEI E +VVSW+   +         EA GLF ++  +  + NE+++ ++
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +++  G R    GK I  +  K+G+       NAL+ MY K G + DA S+F+ +   D 
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN++IAG   +    QAL++   M    + PN +T++S L+A +     +   Q+HS 
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSS 384

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           ++K     D  +   L+  Y KC+ L +++   + + +K+ +  NA+ S         EA
Sbjct: 385 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 444

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L L+  +       N +T S +LK+ A +  +   + +H L++K+ +  DI+V +++ID 
Sbjct: 445 LSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 504

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KC  +EDA+R F +     L  + +M+  YAQ+G   E   LF +M    +KPD    
Sbjct: 505 YGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 564

Query: 583 LAVLTSCCHAGLVREAR 599
            ++L +C +     + +
Sbjct: 565 SSLLNACANLSAFEQGK 581



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 193/390 (49%), Gaps = 2/390 (0%)

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           +F     +   LLS     + LR G QI A   K G  +  SI N LI++Y KC     A
Sbjct: 51  NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYA 110

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R + D     D VSW+++I+GY++NG    AL  F  M    +  N +T +S+L+A S  
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           K L+   QVH  ++ SGF  D  + + L+  Y KC+   +SKR+  EI ++N V  NAL 
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S  V      EA+ L+  +  S  + N  + S ++ AC  + D  +GK IH   +K  YD
Sbjct: 231 SCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            D F  +A++DMY K G + DA   F KI +  +  WNA++ G   H  + +   L  +M
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            + G+ P+  T  + L +C   GL    R   S +  +  +   L     +VD+  +  L
Sbjct: 351 KRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKM-DMESDLFVSVGLVDMYSKCDL 409

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           LE A+M  + +P   D   W +++S  + Y
Sbjct: 410 LEDARMAFNLLP-EKDLIAWNAIISGYSQY 438



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 179/369 (48%), Gaps = 22/369 (5%)

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
           +L FK +      +  +S++      L++   + + +  P   + + +L     +KSL+ 
Sbjct: 18  HLPFKPAPKLIQTVPQFSQDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRP 74

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
            +Q+H+HI KSG   D S+ + LI  Y KC     +++++ E  + + V  +AL S    
Sbjct: 75  GLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQ 134

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                 AL  +  +     + N  TFS VLKAC+ + DL  GK +H + + + ++ D+FV
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            + ++ MY KC    D+KR F +I   ++  WNA+   Y Q     E   LF +M   G+
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGI 254

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLGRVG 629
           KP+E +  +++ +C   GL   +R  +     +HG + +L +         +VD+  +VG
Sbjct: 255 KPNEFSLSSMVNAC--TGLRDSSRGKI-----IHGYLIKLGYDWDPFSANALVDMYAKVG 307

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLL 687
            L  A    +++   PD   W ++++ C ++ + +  L LL   K   + P+    + L 
Sbjct: 308 DLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPN---IFTLS 363

Query: 688 SNLYASAGM 696
           S L A AGM
Sbjct: 364 SALKACAGM 372


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/759 (32%), Positives = 418/759 (55%), Gaps = 11/759 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I +G    PI+S  LI  + K      A +   +   +D +++ A+ISG ++  
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF  +   G+ P  + FSS++  C  ++     E +H +  K G S   Y+ +
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCN 252

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y++    VSAE  F      D V++ +++ G    G  D + E+F +M+   L+ 
Sbjct: 253 ALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKP 312

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A      + +GEQ+H + +K G  S +   +  A+++LYV C     A +
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMI--VEGALLDLYVNCSDIKTAHE 370

Query: 235 MFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           MF      +VV W+  + A    D + E+F +F+ ++      N++T  ++L +      
Sbjct: 371 MFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGA 430

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+QI     K GF   V + + LI MY K G+++ A  I   L   D VSW ++I+G
Sbjct: 431 LDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISG 490

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+++  F +AL  F  ML   +  +    +S + A +  ++L Q  Q+H+    SG+  D
Sbjct: 491 YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSED 550

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L++ Y +C  + E+     +ID K+++  N L S    +    +AL+++  +  
Sbjct: 551 LSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNR 610

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  E +  TF   + A A + +++QGK IH + +K  +D DI V +A+I  Y KCG+IED
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIED 670

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+R F ++   +   WNAM+ GY+QHG  +E  NLF KM + G  P+ +T++ VL++C H
Sbjct: 671 ARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSH 730

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV +   Y   MS  HGL+P+  HYAC+VDL+ R G L  A+  I++MPI PDA IW+
Sbjct: 731 VGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWR 790

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSACT++ N+++G  A   LLEL+P++ +TYVLLSN+YA +G W+   + R+ M+ + 
Sbjct: 791 TLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRG 850

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + KEPG SWI V    H FY GD  H  + +IY+ L +L
Sbjct: 851 VKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAEL 889



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 176/733 (24%), Positives = 347/733 (47%), Gaps = 22/733 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  ++K G   + +L   L+  +    D     +   D  NR + +++ +ISG     
Sbjct: 31  KLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKK 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
            S   L LF  +  + + P   +F+S+++AC      ++  E +H   +  G      + 
Sbjct: 91  MSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIIS 150

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  YAK+G I+SA   F +    D+V++ AM+ G+  NG  +++  +F EM + G+ 
Sbjct: 151 NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              +  ++VL     +K    GEQ+H    K G  S +  ++ NA++ LY R    + A 
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG--SSLETYVCNALVTLYSRMPNFVSAE 268

Query: 234 KMFDEITEPDVVSWSERIAAAC-----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           K+F ++   D VS++  I+        DG  A  LF  ++ +  + +  T+ +LLS+   
Sbjct: 269 KVFSKMQSKDEVSFNSLISGLAQQGFSDG--ALELFTKMKRDYLKPDCVTVASLLSACAS 326

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+Q+ ++  K G    + +  AL+ +Y  C  +  A  +F     ++ V WN M
Sbjct: 327 NGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVM 386

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  + +    +++  +F  M    LIPN +T  SIL   ++  +L    Q+H+ +IK+GF
Sbjct: 387 LVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF 446

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + S LI  Y K   L+ +  +L  + + + V   AL S     +  AEAL+ ++ 
Sbjct: 447 QFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKE 506

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + +   FS  + ACA +  L QG+ IH  +  + Y +D+ + +A++ +Y +CG 
Sbjct: 507 MLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGR 566

Query: 529 IEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           I++A   F KI  +DS++ WN ++ G+AQ G   +   +F +M++  ++    T+ + ++
Sbjct: 567 IKEAYLEFEKIDAKDSIS-WNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVS 625

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +  +   +++ +  +  M    G    +E    ++    + G +E A+    +MP   D 
Sbjct: 626 AAANIANIKQGKQ-IHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDV 684

Query: 648 HIWQSLLSACTI--YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
             W ++++  +   YGN  + L    K +   P++ +   +LS       +   +G    
Sbjct: 685 S-WNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFES 743

Query: 706 EMKEKFLCKEPGY 718
             KE  L  +P +
Sbjct: 744 MSKEHGLVPKPAH 756



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 279/595 (46%), Gaps = 14/595 (2%)

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           + ++G+  +  T+  L+  C   GSL E + +HG  LKLGF +   L +  ++ Y   G+
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL-- 186
           +      F D  +    ++  ++ G++     ++  ++F  M    +   E S  +VL  
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 187 --GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
             G    ++  EQIH   +  G L      ++N ++ LY + G  + A K+FD +   D 
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPI--ISNPLIGLYAKNGLIISARKVFDNLCTKDS 178

Query: 245 VSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW   I+         EA  LF ++         Y   ++LS     ++   G+Q+ A 
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
            +K G      + NAL+++Y +      A  +F  +  KD VS+NS+I+G ++ GF + A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L++F  M    L P+  T+AS+L A +++ +L +  Q+HS++IK+G   D  +   L+  
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y  C+ +  +  +      +N V  N +          +E+  ++R +       N  T+
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             +L+ C ++  L+ G+ IH   +K  +  +++V S +IDMY K G ++ A    R +  
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE 478

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
           D +  W A++ GYAQH  + E    F +M   G++ D I + + +++C     + + R  
Sbjct: 479 DDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQ- 537

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           +   S + G    L     +V L  R G ++ A +  +++    D+  W  L+S 
Sbjct: 538 IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKID-AKDSISWNGLISG 591


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/760 (32%), Positives = 420/760 (55%), Gaps = 15/760 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ L++K+  + D  L  +L++ + K      A   L    +RD++++ ALI GL     
Sbjct: 134 IHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGF 193

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
           +  ++ LF  ++ +G+ P+ FT ++ +KAC    +L   + +H    KLG    +++ S 
Sbjct: 194 ANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSA 253

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK GEI  A   F    + ++V +  ++ GY   G+     ++F  M  L ++ N
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCN 313

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+LT VL     S ++K+G+ IH   +K G+       +   ++++Y +CG  +DA+ +
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN--EFIGCGLVDMYSKCGLAIDAIGV 371

Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  I +PD+V WS  I          E+  LF  +R  D   N+YT+ +LLS+      L
Sbjct: 372 FKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNL 431

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           + G+ I A  +K GF   V++ NAL++MY K G V+D   +++ ++ +D +SWN+ ++G 
Sbjct: 432 QYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGL 491

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G +++ L +F HMLE   IPN YT  SIL + S    +    QVH+HIIK+   LDD
Sbjct: 492 HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ--LDD 549

Query: 413 SMISC--LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +   C  LI  Y KC  L ++    + +  ++      + +     +   +AL  +R + 
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
               + N  T +  L  C+++  LE G+ +H +  K+ +  D+FV SA++DMY KCG +E
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A+  F  + R     WN ++ GYAQ+G  ++    F  M   G+ PD +T+  +L++C 
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACS 729

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV E + + + M    G+ P ++H AC+VD+LGRVG  +  +  I +M +  +A IW
Sbjct: 730 HQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +++L A  ++ N+ LG  A +KL ELQP+ ES+Y+LLSN++A+ G W+DV ++R  M  K
Sbjct: 790 ETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSK 849

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + KEPG SW+   G  H F + D SH Q +EI+ +L +L
Sbjct: 850 GVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDEL 889



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 294/616 (47%), Gaps = 15/616 (2%)

Query: 84  FSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +SS+++ C S   L   + +HG+ +K   +   +L    +  YAK      A +      
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQ 197
           D D V++TA++ G V  G  + S  +F EM++ G+  NEF+L   L A      +  G+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAA 254
           +H    K+G L  +   + +A+++LY +CG+   A KMF  + E + V+W+  +   A  
Sbjct: 235 MHAQAFKLGLLLDL--FVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292

Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            D      LF  +   D + NE+T+  +L      + L+ G+ I +   K G+     IG
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             L+ MY KCG   DA  +F  +   D V W+++I    + G   +++ +F  M     +
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN YT+ S+L A +N+ +L+    +H+ + K GF  D ++ + L+T Y K   +++  ++
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              +  ++ +  NA  S L     +   L ++  +       N  TF  +L +C+ + D+
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             G+ +H   +K + D + FV +A+IDMY KC  +EDA  AF ++    L  W  ++  Y
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQ     +  N F +M + GVKP+E T    L+ C     + E    L  M    G +  
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSD 651

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +   + +VD+  + G +E A+   + + I  D   W +++      G  +  L A   +L
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710

Query: 675 E--LQPDNESTYVLLS 688
           +  + PD  +   +LS
Sbjct: 711 DEGISPDGVTFTGILS 726



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 252/507 (49%), Gaps = 11/507 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++   K G  LD  + + L+  + K  +   A +       ++ +T+N L++G A+  
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                LKLF  +    ++ + FT ++++K C    +L++ +++H + +K G+    ++  
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G ++ Y+K G  + A   F+     D V ++A++      G+ ++S ++F  MR      
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N++++ ++L A+    +++ G+ IH    K GF + V   ++NA++ +Y++ G   D  K
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA--VSNALVTMYMKNGCVHDGTK 471

Query: 235 MFDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +++ + + D++SW+  ++   D G+      +F  +    F  N YT I++L S      
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ A   K    +   +  ALI MY KC  + DA   F+ L  +D  +W  +I  
Sbjct: 532 VHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITN 591

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++     +AL+ F  M +  + PN +T+A  L   S+  SL+   Q+HS + KSG + D
Sbjct: 592 YAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD 651

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y KC  + E++ +   + +++ +  N +           +AL  +R +  
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGK 498
                +G TF+ +L AC+    +E+GK
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGK 738



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 4/207 (1%)

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           W S +++    +S +L+ CA+   L   KAIH L +K   + D  +  +++++Y KC   
Sbjct: 106 WSSKKKLK--YYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYS 163

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A+    K+    +  W A++ G    G  ++   LF +M   G+ P+E T LA     
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFT-LATGLKA 222

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           C   +  +    +   +   GL+  L   + +VDL  + G +E A      MP   D   
Sbjct: 223 CSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV-T 281

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLEL 676
           W  LL+     G++   L     ++EL
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMEL 308


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/760 (32%), Positives = 420/760 (55%), Gaps = 15/760 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ L++K+  + D  L  +L++ + K      A   L    +RD++++ ALI GL     
Sbjct: 134 IHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGF 193

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
           +  ++ LF  ++ +G+ P+ FT ++ +KAC    +L   + +H    KLG    +++ S 
Sbjct: 194 ANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSA 253

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK GEI  A   F    + ++V +  ++ GY   G+     ++F  M  L ++ N
Sbjct: 254 LVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCN 313

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+LT VL     S ++K+G+ IH   +K G+       +   ++++Y +CG  +DA+ +
Sbjct: 314 EFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN--EFIGCGLVDMYSKCGLAIDAIGV 371

Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  I +PD+V WS  I          E+  LF  +R  D   N+YT+ +LLS+      L
Sbjct: 372 FKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNL 431

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           + G+ I A  +K GF   V++ NAL++MY K G V+D   +++ ++ +D +SWN+ ++G 
Sbjct: 432 QYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGL 491

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G +++ L +F HMLE   IPN YT  SIL + S    +    QVH+HIIK+   LDD
Sbjct: 492 HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ--LDD 549

Query: 413 SMISC--LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +   C  LI  Y KC  L ++    + +  ++      + +     +   +AL  +R + 
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
               + N  T +  L  C+++  LE G+ +H +  K+ +  D+FV SA++DMY KCG +E
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A+  F  + R     WN ++ GYAQ+G  ++    F  M   G+ PD +T+  +L++C 
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACS 729

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV E + + + M    G+ P ++H AC+VD+LGRVG  +  +  I +M +  +A IW
Sbjct: 730 HQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +++L A  ++ N+ LG  A +KL ELQP+ ES+Y+LLSN++A+ G W+DV ++R  M  K
Sbjct: 790 ETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSK 849

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + KEPG SW+   G  H F + D SH Q +EI+ +L +L
Sbjct: 850 GVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDEL 889



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 294/616 (47%), Gaps = 15/616 (2%)

Query: 84  FSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +SS+++ C S   L   + +HG+ +K   +   +L    +  YAK      A +      
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQ 197
           D D V++TA++ G V  G  + S  +F EM++ G+  NEF+L   L A      +  G+Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAA 254
           +H    K+G L  +   + +A+++LY +CG+   A KMF  + E + V+W+  +   A  
Sbjct: 235 MHAQAFKLGLLLDL--FVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQR 292

Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            D      LF  +   D + NE+T+  +L      + L+ G+ I +   K G+     IG
Sbjct: 293 GDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIG 352

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             L+ MY KCG   DA  +F  +   D V W+++I    + G   +++ +F  M     +
Sbjct: 353 CGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL 412

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN YT+ S+L A +N+ +L+    +H+ + K GF  D ++ + L+T Y K   +++  ++
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              +  ++ +  NA  S L     +   L ++  +       N  TF  +L +C+ + D+
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             G+ +H   +K + D + FV +A+IDMY KC  +EDA  AF ++    L  W  ++  Y
Sbjct: 533 HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQ     +  N F +M + GVKP+E T    L+ C     + E    L  M    G +  
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSD 651

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +   + +VD+  + G +E A+   + + I  D   W +++      G  +  L A   +L
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710

Query: 675 E--LQPDNESTYVLLS 688
           +  + PD  +   +LS
Sbjct: 711 DEGISPDGVTFTGILS 726



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 252/507 (49%), Gaps = 11/507 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++   K G  LD  + + L+  + K  +   A +       ++ +T+N L++G A+  
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                LKLF  +    ++ + FT ++++K C    +L++ +++H + +K G+    ++  
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G ++ Y+K G  + A   F+     D V ++A++      G+ ++S ++F  MR      
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N++++ ++L A+    +++ G+ IH    K GF + V   ++NA++ +Y++ G   D  K
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA--VSNALVTMYMKNGCVHDGTK 471

Query: 235 MFDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +++ + + D++SW+  ++   D G+      +F  +    F  N YT I++L S      
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFD 531

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ A   K    +   +  ALI MY KC  + DA   F+ L  +D  +W  +I  
Sbjct: 532 VHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITN 591

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++     +AL+ F  M +  + PN +T+A  L   S+  SL+   Q+HS + KSG + D
Sbjct: 592 YAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSD 651

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y KC  + E++ +   + +++ +  N +           +AL  +R +  
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLD 711

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGK 498
                +G TF+ +L AC+    +E+GK
Sbjct: 712 EGISPDGVTFTGILSACSHQGLVEEGK 738



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 4/207 (1%)

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           W S +++    +S +L+ CA+   L   KAIH L +K   + D  +  +++++Y KC   
Sbjct: 106 WSSKKKL--KYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYS 163

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A+    K+    +  W A++ G    G  ++   LF +M   G+ P+E T LA     
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFT-LATGLKA 222

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           C   +  +    +   +   GL+  L   + +VDL  + G +E A      MP   D   
Sbjct: 223 CSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV-T 281

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLEL 676
           W  LL+     G++   L     ++EL
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMEL 308


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/761 (33%), Positives = 413/761 (54%), Gaps = 14/761 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I  G     I+   LI  +++     RA R       +D  ++ A+ISGL++  
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNE 250

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A++LF  +   G+ P  + FSS++ AC  ++  EI   +HG+ LKLGFSS  Y+ +
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y   G ++SAE  F +    D V Y  ++ G    G  +K+ E+F  M+  GLE 
Sbjct: 311 ALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEP 370

Query: 178 NEFSLTA-VLGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L + V+  S D  +  G+Q+H +  K+GF S   + +  A++NLY +C     A+ 
Sbjct: 371 DSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASN--DKIEGALLNLYAKCSDIETALN 428

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F E    +VV W+  + A     D   +F +F+ ++  +   N+YT  ++L +      
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 488

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+QI +   K  F     + + LI MY K G+++ A  I      KD VSW +MIAG
Sbjct: 489 LELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 548

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++  F ++AL  F  ML+  +  +   + + + A +  ++LK+  Q+H+    SGF  D
Sbjct: 549 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 608

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
               + L+T Y KC  + E+     + +  + +  NAL S    +  + EAL ++  +  
Sbjct: 609 LPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNR 668

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + N  TF   +KA +   +++QGK +H +  K  YD +  V +A+I MY KCG+I D
Sbjct: 669 EGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISD 728

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK+ F ++   +   WNAM+  Y++HG   E  + F++M    V+P+ +T + VL++C H
Sbjct: 729 AKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 788

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV +   Y   M+  +GL P+ EHY C+VD+L R GLL  AK  I +MPI PDA +W+
Sbjct: 789 IGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWR 848

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ N+++G  A   LLEL+P++ +TYVLLSNLYA    W+     R++MKEK 
Sbjct: 849 TLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKG 908

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI---YKELIK 749
           + KEPG SWI V    H FY GD +H  + EI   +K+L K
Sbjct: 909 VKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTK 949



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 163/671 (24%), Positives = 320/671 (47%), Gaps = 14/671 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S ++K G   +  LS  L+  +    D   A +   +   R I T+N +I  LA   
Sbjct: 89  KLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRS 148

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQEN--EIVHGVCLKLGFSSRVYLV 116
            SG    LF R+  + + P+  TFS +++AC  GS+  +  E +H   +  G      + 
Sbjct: 149 LSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVC 208

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+++G +  A   F      D+ ++ AM+ G   N    ++  +F +M  LG+ 
Sbjct: 209 NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              ++ ++VL A   ++    GEQ+HG  +K+GF S    ++ NA+++LY   G  + A 
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT--YVCNALVSLYFHLGSLISAE 326

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  +++ D V+++  I        G +A  LFK ++ +  + +  T+ +L+ +   + 
Sbjct: 327 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG 386

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L +G+Q+ A+  K+GF     I  AL+++Y KC  +  A + F     ++ V WN M+ 
Sbjct: 387 TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y        +  +F  M    ++PN YT  SIL+       L+   Q+HS IIK+ F L
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S LI  Y K   L+ +  +L     K+ V    + +     +   +AL  +R + 
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 +    +  + ACA +  L++G+ IH  A  + +  D+  ++A++ +Y KCG IE
Sbjct: 567 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIE 626

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A  AF +        WNA++ G+ Q G   E   +F +M++ G+  +  T+ + + +  
Sbjct: 627 EAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAAS 686

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
               +++ +   + ++   G   + E    I+ +  + G +  AK    ++ +  +   W
Sbjct: 687 ETANMKQGKQVHAVITKT-GYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS-W 744

Query: 651 QSLLSACTIYG 661
            ++++A + +G
Sbjct: 745 NAMINAYSKHG 755



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 163/644 (25%), Positives = 279/644 (43%), Gaps = 24/644 (3%)

Query: 32  RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R   R L   +       +  IS    F ++G      D +   G+RP+  T   L++ C
Sbjct: 23  RTVLRTLCQIRRASFTAISVSISEDESFQENG-----IDSVENCGIRPNHQTLKWLLEGC 77

Query: 92  ----GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
               GSL E   +H   LKLGF +   L    ++ Y   G++  A   F +  +     +
Sbjct: 78  LKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTW 137

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA------SFDVKEGEQIHGF 201
             M+          K   +F  M +  +  NE + + VL A      +FDV   EQIH  
Sbjct: 138 NKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHAR 195

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---V 258
            +  G   G    + N +++LY R G    A ++FD +   D  SW   I+        V
Sbjct: 196 IIYQGL--GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEV 253

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  LF D+         Y   ++LS+      L  G+Q+     K+GF     + NAL+
Sbjct: 254 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           S+Y   G +  A  IF  +  +D+V++N++I G S+ G+  +A+++F  M    L P+  
Sbjct: 314 SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+AS++ A S+  +L    Q+H++  K GF  +D +   L+  Y KC+ +  +     E 
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           + +N V  N +            +  ++R +       N  T+  +LK C  + DLE G+
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH   +K  +  + +V S +IDMY K G ++ A     +     +  W  M+ GY Q+ 
Sbjct: 494 QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 553

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              +    F +M   G++ DE+     +++C     ++E +  +   + + G    L   
Sbjct: 554 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQ 612

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             +V L  + G +E A +  +Q     D   W +L+S     GN
Sbjct: 613 NALVTLYSKCGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQSGN 655



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 241/504 (47%), Gaps = 20/504 (3%)

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           L   L  +  + EG ++H   +K+GF +  C  L+  +++ Y+  G    A+K+FDE+ E
Sbjct: 74  LEGCLKTNGSLDEGRKLHSQILKLGFDNNAC--LSEKLLDFYLFKGDLDGALKVFDEMPE 131

Query: 242 PDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV-GGERILRAGKQ 297
             + +W++ I   A+     + F LF  +   +   NE T   +L +  GG       +Q
Sbjct: 132 RTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQ 191

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I A     G  +   + N LI +Y + G V+ AR +FD L  KD  SW +MI+G S+N  
Sbjct: 192 IHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNEC 251

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +A+ +FC M    ++P  Y  +S+L A    +SL+   Q+H  ++K GF  D  + + 
Sbjct: 252 EVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 311

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L++ Y    +L  ++ + S + +++AV  N L + L       +A+EL++ +     E +
Sbjct: 312 LVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPD 371

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            +T + ++ AC++   L  G+ +H    K  +  +  +E A++++Y KC  IE A   F 
Sbjct: 372 SNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +   +++  WN M++ Y           +F +M    + P++ TY ++L +C   G    
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG---- 487

Query: 598 ARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
               L     +H  I     QL  Y C  ++D+  ++G L+ A   + +     D   W 
Sbjct: 488 ---DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWT 543

Query: 652 SLLSACTIYGNIDLGLLAGSKLLE 675
           ++++  T Y   D  L    ++L+
Sbjct: 544 TMIAGYTQYNFDDKALTTFRQMLD 567


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/757 (33%), Positives = 413/757 (54%), Gaps = 17/757 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK--FADF-RRAFRFLFDTQNRDIITYNALISGLA 57
           QI++ ++  G     ++   LI  +++  F D  RR F  L   + +D  ++ A+ISGL+
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL---RLKDHSSWVAMISGLS 264

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
           +      A++LF  +   G+ P  + FSS++ AC  ++  EI   +HG+ LKLGFSS  Y
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y   G ++SAE  F +    D V Y  ++ G    G  +K+ E+F  M   G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           LE +  +L +++    A   +  G+Q+H +  K+GF S   N +  A++NLY +C     
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN--NKIEGALLNLYAKCADIET 442

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+  F E    +VV W+  + A     D   +F +F+ ++  +   N+YT  ++L +   
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+QI +   K  F     + + LI MY K G+++ A  I      KD VSW +M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY++  F ++AL  F  ML+  +  +   + + + A +  ++LK+  Q+H+    SGF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D    + L+T Y +C  + ES     + +  + +  NAL S    +  + EAL ++  
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + N  TF   +KA +   +++QGK +H +  K  YD +  V +A+I MY KCG+
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I DA++ F ++   +   WNA++  Y++HG   E  + F++M    V+P+ +T + VL++
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV +   Y   M+  +GL P+ EHY C+VD+L R GLL  AK  I +MPI PDA 
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++LLSAC ++ N+++G  A   LLEL+P++ +TYVLLSNLYA +  W+     R++MK
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           EK + KEPG SWI V    H FY GD +H  + EI++
Sbjct: 923 EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 181/756 (23%), Positives = 339/756 (44%), Gaps = 49/756 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S ++K G   +  LS  L   +    D   AF+   +   R I T+N +I  LA   
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQEN--EIVHGVCLKLGFSSRVYLV 116
             G    LF R+  + + P+  TFS +++AC  GS+  +  E +H   L  G      + 
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+++G +  A   F      D+ ++ AM+ G   N    ++  +F +M  LG+ 
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              ++ ++VL A   ++    GEQ+HG  +K+GF S    ++ NA+++LY   G  + A 
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT--YVCNALVSLYFHLGNLISAE 343

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  +++ D V+++  I        G +A  LFK +  +  + +  T+ +L+ +   + 
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q+ A+  K+GF     I  AL+++Y KC  +  A   F     ++ V WN M+ 
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y        +  +F  M    ++PN YT  SIL+       L+   Q+HS IIK+ F L
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S LI  Y K   L+ +  +L     K+ V    + +     +   +AL  +R + 
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 +    +  + ACA +  L++G+ IH  A  + +  D+  ++A++ +Y +CG IE
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           ++  AF +        WNA++ G+ Q G   E   +F +M++ G+  +  T+ + + +  
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703

Query: 591 HAGLVREART-----------------------YLSC--MSDLHGLIPQLE-----HYAC 620
               +++ +                        Y  C  +SD      ++       +  
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763

Query: 621 IVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL---L 674
           I++   + G    A  + DQM    + P+      +LSAC+  G +D G+     +    
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            L P  E  YV + ++   AG+ +   +  +EM  K
Sbjct: 824 GLSPKPEH-YVCVVDMLTRAGLLSRAKEFIQEMPIK 858



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 269/612 (43%), Gaps = 25/612 (4%)

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           K  D +  +G+RP+  T   L++ C    GSL E   +H   LKLG  S   L     + 
Sbjct: 70  KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y   G++  A   F +  +     +  M+          +   +FV M S  +  NE + 
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189

Query: 183 TAVLGA------SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVK 234
           + VL A      +FDV   EQIH   +  G      VCN L    ++LY R G    A +
Sbjct: 190 SGVLEACRGGSVAFDVV--EQIHARILYQGLRDSTVVCNPL----IDLYSRNGFVDLARR 243

Query: 235 MFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +FD +   D  SW   I+      C+  EA  LF D+         Y   ++LS+     
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q+     K+GF     + NAL+S+Y   G +  A  IF  +  +D+V++N++I 
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G S+ G+  +A+++F  M    L P+  T+AS++ A S   +L +  Q+H++  K GF  
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           ++ +   L+  Y KC  +  +     E + +N V  N +            +  ++R + 
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N  T+  +LK C  + DLE G+ IH   +K  +  + +V S +IDMY K G ++
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A     +     +  W  M+ GY Q+    +    F +M   G++ DE+     +++C 
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
               ++E +  +   + + G    L     +V L  R G +E + +  +Q     D   W
Sbjct: 603 GLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAW 660

Query: 651 QSLLSACTIYGN 662
            +L+S     GN
Sbjct: 661 NALVSGFQQSGN 672



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 237/504 (47%), Gaps = 20/504 (3%)

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           L   L  +  + EG ++H   +K+G  S  C  L+  + + Y+  G    A K+FDE+ E
Sbjct: 91  LEGCLKTNGSLDEGRKLHSQILKLGLDSNGC--LSEKLFDFYLFKGDLYGAFKVFDEMPE 148

Query: 242 PDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV-GGERILRAGKQ 297
             + +W++ I          E FGLF  +   +   NE T   +L +  GG       +Q
Sbjct: 149 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ 208

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I A     G  +   + N LI +Y + G V+ AR +FD L  KD  SW +MI+G S+N  
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +A+ +FC M    ++P  Y  +S+L A    +SL+   Q+H  ++K GF  D  + + 
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L++ Y     L  ++ + S + +++AV  N L + L       +A+EL++ +     E +
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            +T + ++ AC+A   L +G+ +H    K  +  +  +E A++++Y KC  IE A   F 
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +   +++  WN M++ Y           +F +M    + P++ TY ++L +C   G    
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG---- 504

Query: 598 ARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
               L     +H  I     QL  Y C  ++D+  ++G L+ A   + +     D   W 
Sbjct: 505 ---DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWT 560

Query: 652 SLLSACTIYGNIDLGLLAGSKLLE 675
           ++++  T Y   D  L    ++L+
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLD 584


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/757 (33%), Positives = 413/757 (54%), Gaps = 17/757 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK--FADF-RRAFRFLFDTQNRDIITYNALISGLA 57
           QI++ ++  G     ++   LI  +++  F D  RR F  L   + +D  ++ A+ISGL+
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL---RLKDHSSWVAMISGLS 224

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
           +      A++LF  +   G+ P  + FSS++ AC  ++  EI   +HG+ LKLGFSS  Y
Sbjct: 225 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 284

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y   G ++SAE  F +    D V Y  ++ G    G  +K+ E+F  M   G
Sbjct: 285 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 344

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           LE +  +L +++    A   +  G+Q+H +  K+GF S   N +  A++NLY +C     
Sbjct: 345 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN--NKIEGALLNLYAKCADIET 402

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+  F E    +VV W+  + A     D   +F +F+ ++  +   N+YT  ++L +   
Sbjct: 403 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 462

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+QI +   K  F     + + LI MY K G+++ A  I      KD VSW +M
Sbjct: 463 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 522

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY++  F ++AL  F  ML+  +  +   + + + A +  ++LK+  Q+H+    SGF
Sbjct: 523 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 582

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D    + L+T Y +C  + ES     + +  + +  NAL S    +  + EAL ++  
Sbjct: 583 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 642

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + N  TF   +KA +   +++QGK +H +  K  YD +  V +A+I MY KCG+
Sbjct: 643 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 702

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I DA++ F ++   +   WNA++  Y++HG   E  + F++M    V+P+ +T + VL++
Sbjct: 703 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 762

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV +   Y   M+  +GL P+ EHY C+VD+L R GLL  AK  I +MPI PDA 
Sbjct: 763 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 822

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++LLSAC ++ N+++G  A   LLEL+P++ +TYVLLSNLYA +  W+     R++MK
Sbjct: 823 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 882

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           EK + KEPG SWI V    H FY GD +H  + EI++
Sbjct: 883 EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 919



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 181/756 (23%), Positives = 339/756 (44%), Gaps = 49/756 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S ++K G   +  LS  L   +    D   AF+   +   R I T+N +I  LA   
Sbjct: 66  KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 125

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQEN--EIVHGVCLKLGFSSRVYLV 116
             G    LF R+  + + P+  TFS +++AC  GS+  +  E +H   L  G      + 
Sbjct: 126 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 185

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+++G +  A   F      D+ ++ AM+ G   N    ++  +F +M  LG+ 
Sbjct: 186 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 245

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              ++ ++VL A   ++    GEQ+HG  +K+GF S    ++ NA+++LY   G  + A 
Sbjct: 246 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT--YVCNALVSLYFHLGNLISAE 303

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  +++ D V+++  I        G +A  LFK +  +  + +  T+ +L+ +   + 
Sbjct: 304 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 363

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q+ A+  K+GF     I  AL+++Y KC  +  A   F     ++ V WN M+ 
Sbjct: 364 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y        +  +F  M    ++PN YT  SIL+       L+   Q+HS IIK+ F L
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S LI  Y K   L+ +  +L     K+ V    + +     +   +AL  +R + 
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 +    +  + ACA +  L++G+ IH  A  + +  D+  ++A++ +Y +CG IE
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 603

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           ++  AF +        WNA++ G+ Q G   E   +F +M++ G+  +  T+ + + +  
Sbjct: 604 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 663

Query: 591 HAGLVREART-----------------------YLSC--MSDLHGLIPQLE-----HYAC 620
               +++ +                        Y  C  +SD      ++       +  
Sbjct: 664 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 723

Query: 621 IVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL---L 674
           I++   + G    A  + DQM    + P+      +LSAC+  G +D G+     +    
Sbjct: 724 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 783

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            L P  E  YV + ++   AG+ +   +  +EM  K
Sbjct: 784 GLSPKPEH-YVCVVDMLTRAGLLSRAKEFIQEMPIK 818



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 269/612 (43%), Gaps = 25/612 (4%)

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           K  D +  +G+RP+  T   L++ C    GSL E   +H   LKLG  S   L     + 
Sbjct: 30  KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 89

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y   G++  A   F +  +     +  M+          +   +FV M S  +  NE + 
Sbjct: 90  YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 149

Query: 183 TAVLGA------SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVK 234
           + VL A      +FDV   EQIH   +  G      VCN L    ++LY R G    A +
Sbjct: 150 SGVLEACRGGSVAFDVV--EQIHARILYQGLRDSTVVCNPL----IDLYSRNGFVDLARR 203

Query: 235 MFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +FD +   D  SW   I+      C+  EA  LF D+         Y   ++LS+     
Sbjct: 204 VFDGLRLKDHSSWVAMISGLSKNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 262

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q+     K+GF     + NAL+S+Y   G +  A  IF  +  +D+V++N++I 
Sbjct: 263 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 322

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G S+ G+  +A+++F  M    L P+  T+AS++ A S   +L +  Q+H++  K GF  
Sbjct: 323 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 382

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           ++ +   L+  Y KC  +  +     E + +N V  N +            +  ++R + 
Sbjct: 383 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 442

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N  T+  +LK C  + DLE G+ IH   +K  +  + +V S +IDMY K G ++
Sbjct: 443 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 502

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A     +     +  W  M+ GY Q+    +    F +M   G++ DE+     +++C 
Sbjct: 503 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 562

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
               ++E +  +   + + G    L     +V L  R G +E + +  +Q     D   W
Sbjct: 563 GLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAW 620

Query: 651 QSLLSACTIYGN 662
            +L+S     GN
Sbjct: 621 NALVSGFQQSGN 632



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 237/504 (47%), Gaps = 20/504 (3%)

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           L   L  +  + EG ++H   +K+G  S  C  L+  + + Y+  G    A K+FDE+ E
Sbjct: 51  LEGCLKTNGSLDEGRKLHSQILKLGLDSNGC--LSEKLFDFYLFKGDLYGAFKVFDEMPE 108

Query: 242 PDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV-GGERILRAGKQ 297
             + +W++ I          E FGLF  +   +   NE T   +L +  GG       +Q
Sbjct: 109 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ 168

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I A     G  +   + N LI +Y + G V+ AR +FD L  KD  SW +MI+G S+N  
Sbjct: 169 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 228

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +A+ +FC M    ++P  Y  +S+L A    +SL+   Q+H  ++K GF  D  + + 
Sbjct: 229 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 288

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L++ Y     L  ++ + S + +++AV  N L + L       +A+EL++ +     E +
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            +T + ++ AC+A   L +G+ +H    K  +  +  +E A++++Y KC  IE A   F 
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +   +++  WN M++ Y           +F +M    + P++ TY ++L +C   G    
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG---- 464

Query: 598 ARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
               L     +H  I     QL  Y C  ++D+  ++G L+ A   + +     D   W 
Sbjct: 465 ---DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWT 520

Query: 652 SLLSACTIYGNIDLGLLAGSKLLE 675
           ++++  T Y   D  L    ++L+
Sbjct: 521 TMIAGYTQYNFDDKALTTFRQMLD 544


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/754 (33%), Positives = 414/754 (54%), Gaps = 11/754 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S     G    P+++  LI  ++K      A +       +DI+T+ A+ISGL++  
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ LF  +    + P  +  SS++ A   +Q  E+   +H + +K GF S  Y+ +
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCN 300

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  Y++S +++SAE  F      D V+Y +++ G V  G  D++ E+F +M+   L+ 
Sbjct: 301 GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A   V    +G Q+H   +K G  + +   L  ++++LY +C     A K
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII--LEGSLLDLYSKCADVETAHK 418

Query: 235 MFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F      ++V W+  + A    D + ++F +F+ ++      N++T  ++L +      
Sbjct: 419 FFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGA 478

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+QI     K GF   V + + LI MY K GQ+  A  I   L   D VSW +MIAG
Sbjct: 479 LYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAG 538

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++  F++AL +F  M    +  +    AS + A +  ++L+Q  Q+H+    +GF  D
Sbjct: 539 YVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGAD 598

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + LI+ Y +C  + E+     +I  KN +  N+L S L  +    EAL+++  +  
Sbjct: 599 LSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLR 658

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  EVN  T+   + A A++ +++QG+ IH + LK  YD +  V +++I +Y K G+I D
Sbjct: 659 TEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISD 718

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A R F  +   ++  WNAM+ GY+QHGC  E   LF +M   G+ P+ +T++ VL++C H
Sbjct: 719 AWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSH 778

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV+E   Y   M  +H L+P+ EHY C+VDLLGR G L+ A   I +MPIP DA IW+
Sbjct: 779 IGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWR 838

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC I+ NI++G  A   LLEL+P++ +TYVL+SN+YA +  W      RK MK++ 
Sbjct: 839 TLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRG 898

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           + KEPG SWI V    H FYAGD  H  + +IY+
Sbjct: 899 VKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYE 932



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 288/585 (49%), Gaps = 12/585 (2%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           K+G   +P+L  +L+ ++ +  D   A +   +  NR + ++N +I        +     
Sbjct: 86  KSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFC 145

Query: 68  LFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEI--VHGVCLKLGFSSRVYLVSGFIENY 123
           LF R+  +G+ P+ +TF+ ++KAC  G +  N +  VH      GF S   + +  I+ Y
Sbjct: 146 LFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLY 205

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           +K+G I SA+  F      D V + AM+ G   NG  +++  +F +M +  +    + L+
Sbjct: 206 SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLS 265

Query: 184 AVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +VL AS  ++    GEQ+H   +K GF S    ++ N ++ LY R  + + A ++F  + 
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSET--YVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 241 EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             D VS++  I+          A  LF  ++ +  + +  T+ +LLS+      L  G Q
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + +   K G    + +  +L+ +Y KC  V  A   F     ++ V WN M+  Y +   
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDN 443

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            + + ++F  M    +IPN +T  SIL   ++  +L    Q+H+H+IK+GF L+  + S 
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSV 503

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y K   L  + R+L  + + + V   A+ +  V     +EAL+L+  +     + +
Sbjct: 504 LIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFD 563

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
              F+  + ACA +  L QG+ IH  +  A +  D+ + +A+I +Y +CG I++A  AF 
Sbjct: 564 NIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFE 623

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           KI   +   WN+++ G AQ G + E   +F +M +   + +  TY
Sbjct: 624 KIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 158/630 (25%), Positives = 297/630 (47%), Gaps = 15/630 (2%)

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           ++L + +  +G+R +   +  L++ C   GSL E   +H    K GF     L+   ++N
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y + G+   A   F +  +    ++  M+  +V      +   +F  M + G+  N ++ 
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 183 TAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             VL    G        +Q+H      GF S     + N +++LY + G    A K+F+ 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL--VANLLIDLYSKNGYIESAKKVFNC 220

Query: 239 ITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D+V+W   I+  + +G+  EA  LF D+  ++     Y + ++LS+    ++   G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +Q+     K GF     + N L+++Y +  ++  A  IF  +  +D VS+NS+I+G  + 
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           GF ++AL++F  M    L P+  T+AS+L A ++  +L + MQ+HSH IK+G   D  + 
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
             L+  Y KC  +  + +     + +N V  N +          +++ E++R +      
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N  T+  +L+ C ++  L  G+ IH   +K  +  +++V S +IDMY K G +  A R 
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
            R++  D +  W AM+ GY QH  + E   LF +M   G++ D I + + +++C     +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           R+ +  +   S   G    L     ++ L  R G ++ A +  +++    +   W SL+S
Sbjct: 581 RQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVS 638

Query: 656 ACTIYGNIDLGLLAGSKLLELQPD-NESTY 684
                G  +  L    ++L  + + N  TY
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 138/331 (41%), Gaps = 16/331 (4%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +LE    S SL + M++H  I KSGF  +  +I  L+  Y +    + + +V  E   ++
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM-TDLEQGKAIH 501
               N +  V V    + +   L+R +       NG TF+ VLKAC          K +H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
                  +D    V + +ID+Y K G IE AK+ F  IC   +  W AM+ G +Q+G   
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC- 620
           E   LF  M    + P      +VL++     L  E    L C+    G     E Y C 
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF-ELGEQLHCLVIKWGF--HSETYVCN 300

Query: 621 -IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQ 677
            +V L  R   L  A+     M    D   + SL+S     G  D  L   +K+    L+
Sbjct: 301 GLVALYSRSRKLISAERIFSTMN-SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLK 359

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           PD  +   LLS   A A     VG L K M+
Sbjct: 360 PDCITVASLLS---ACA----SVGALHKGMQ 383


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/754 (33%), Positives = 413/754 (54%), Gaps = 11/754 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S     G    P+++  LI  ++K      A +       +DI+T+ A+ISGL++  
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ LF  +    + P  +  SS++ A   +Q  E+   +H + +K GF S  Y+ +
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCN 300

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  Y++S +++SAE  F      D V+Y +++ G V  G  D++ E+F +M+   L+ 
Sbjct: 301 GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A   V    +G Q+H   +K G  + +   L  ++++LY +C     A K
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII--LEGSLLDLYSKCADVETAHK 418

Query: 235 MFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F      ++V W+  + A    D + ++F +F+ ++      N++T  ++L +      
Sbjct: 419 FFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGA 478

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+QI     K GF   V + + LI MY K GQ+  A  I   L   D VSW +MIAG
Sbjct: 479 LYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAG 538

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++  F++AL +F  M    +  +    AS + A +  ++L+Q  Q+H+    +GF  D
Sbjct: 539 YVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGAD 598

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + LI+ Y +C  + E+     +I  KN +  N+L S L  +    EAL+++  +  
Sbjct: 599 LSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLR 658

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  EVN  T+   + A A++ +++QG+ IH + LK  YD +  V +++I +Y K G+I D
Sbjct: 659 TEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISD 718

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A R F  +   ++  WNAM+ GY+QHGC  E   LF +M   G+ P+ +T++ VL++C H
Sbjct: 719 AWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSH 778

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV+E   Y   M  +H L+P+ EHY C+VDLLGR G L+ A   I +MPIP DA IW+
Sbjct: 779 IGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWR 838

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC I+ NI++G  A   LLEL+P++ +TYVL+SN+YA +  W      RK MK+  
Sbjct: 839 TLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXG 898

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           + KEPG SWI V    H FYAGD  H  + +IY+
Sbjct: 899 VKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYE 932



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 288/585 (49%), Gaps = 12/585 (2%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           K+G   +P+L  +L+ ++ +  D   A +   +  NR + ++N +I        +     
Sbjct: 86  KSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFC 145

Query: 68  LFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEI--VHGVCLKLGFSSRVYLVSGFIENY 123
           LF R+  +G+ P+ +TF+ ++KAC  G +  N +  VH      GF S   + +  I+ Y
Sbjct: 146 LFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLY 205

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           +K+G I SA+  F      D V + AM+ G   NG  +++  +F +M +  +    + L+
Sbjct: 206 SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLS 265

Query: 184 AVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +VL AS  ++    GEQ+H   +K GF S    ++ N ++ LY R  + + A ++F  + 
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSET--YVCNGLVALYSRSRKLISAERIFSTMN 323

Query: 241 EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             D VS++  I+          A  LF  ++ +  + +  T+ +LLS+      L  G Q
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + +   K G    + +  +L+ +Y KC  V  A   F     ++ V WN M+  Y +   
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDN 443

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            + + ++F  M    +IPN +T  SIL   ++  +L    Q+H+H+IK+GF L+  + S 
Sbjct: 444 LSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSV 503

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y K   L  + R+L  + + + V   A+ +  V     +EAL+L+  +     + +
Sbjct: 504 LIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFD 563

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
              F+  + ACA +  L QG+ IH  +  A +  D+ + +A+I +Y +CG I++A  AF 
Sbjct: 564 NIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFE 623

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           KI   +   WN+++ G AQ G + E   +F +M +   + +  TY
Sbjct: 624 KIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 158/630 (25%), Positives = 297/630 (47%), Gaps = 15/630 (2%)

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           ++L + +  +G+R +   +  L++ C   GSL E   +H    K GF     L+   ++N
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y + G+   A   F +  +    ++  M+  +V      +   +F  M + G+  N ++ 
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 183 TAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             VL    G        +Q+H      GF S     + N +++LY + G    A K+F+ 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL--VANLLIDLYSKNGYIESAKKVFNC 220

Query: 239 ITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D+V+W   I+  + +G+  EA  LF D+  ++     Y + ++LS+    ++   G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +Q+     K GF     + N L+++Y +  ++  A  IF  +  +D VS+NS+I+G  + 
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           GF ++AL++F  M    L P+  T+AS+L A ++  +L + MQ+HSH IK+G   D  + 
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
             L+  Y KC  +  + +     + +N V  N +          +++ E++R +      
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N  T+  +L+ C ++  L  G+ IH   +K  +  +++V S +IDMY K G +  A R 
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
            R++  D +  W AM+ GY QH  + E   LF +M   G++ D I + + +++C     +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           R+ +  +   S   G    L     ++ L  R G ++ A +  +++    +   W SL+S
Sbjct: 581 RQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVS 638

Query: 656 ACTIYGNIDLGLLAGSKLLELQPD-NESTY 684
                G  +  L    ++L  + + N  TY
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTY 668



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 138/331 (41%), Gaps = 16/331 (4%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +LE    S SL + M++H  I KSGF  +  +I  L+  Y +    + + +V  E   ++
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM-TDLEQGKAIH 501
               N +  V V    + +   L+R +       NG TF+ VLKAC          K +H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
                  +D    V + +ID+Y K G IE AK+ F  IC   +  W AM+ G +Q+G   
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC- 620
           E   LF  M    + P      +VL++     L  E    L C+    G     E Y C 
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF-ELGEQLHCLVIKWGF--HSETYVCN 300

Query: 621 -IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQ 677
            +V L  R   L  A+     M    D   + SL+S     G  D  L   +K+    L+
Sbjct: 301 GLVALYSRSRKLISAERIFSTMN-SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLK 359

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           PD  +   LLS   A A     VG L K M+
Sbjct: 360 PDCITVASLLS---ACA----SVGALHKGMQ 383


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/765 (31%), Positives = 404/765 (52%), Gaps = 13/765 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLAR 58
           Q++  +I++    D      LI+ + +      A +         R + ++NA++ G  +
Sbjct: 44  QVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQ 103

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
           +     ALKL  +++  GL PD  T  S + +C   G+L+    +H   ++ G    V +
Sbjct: 104 YGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKV 163

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  YAK G I  A   F        V++T  + GY   G  + + E+F +M   G+
Sbjct: 164 ANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGV 223

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  +  +VL A      +K G+ +H   +  G  S     +  A++ +Y +CG   D 
Sbjct: 224 VPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTA--VGTALVKMYAKCGSYKDC 281

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F+++   D+++W+  I    +G    EA  ++  ++      N+ T + LL++    
Sbjct: 282 RQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNS 341

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK+I +   K GF   + + NALISMY +CG + DAR +FD ++ KD +SW +MI
Sbjct: 342 AALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMI 401

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            G +++GF  +AL ++  M +  + PN  T  SIL A S+  +L+   ++H  ++++G  
Sbjct: 402 GGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLA 461

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + L+  Y  C ++ ++++V   + +++ V  NA+       +   EAL+L+  +
Sbjct: 462 TDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRL 521

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                + +  T+  +L ACA    LE  + IH L  K  +  D  V +A++  Y KCG+ 
Sbjct: 522 QEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSF 581

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA   F K+ + ++  WNA++ G AQHG   +   LF +M   GVKPD +T++++L++C
Sbjct: 582 SDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSAC 641

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGL+ E R Y   MS    +IP +EHY C+VDLLGR G L+ A+  I  MP   +  I
Sbjct: 642 SHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRI 701

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC I+GN+ +   A    L+L  DN   YV LS++YA+AGMW+   KLRK M++
Sbjct: 702 WGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQ 761

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + + KEPG SWI VG   H+F A D SH QS++IY EL +L   M
Sbjct: 762 RGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAM 806



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 267/547 (48%), Gaps = 15/547 (2%)

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
           E D + +V   ++  G ++N      +L    +VK+   G Q+H   ++   +     + 
Sbjct: 3   EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPD--QYT 60

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEIT--EPDVVSWSERIAAACDG---VEAFGLFKDLRFN 270
            NA++N+Y++CG   +A +++ +++  E  V SW+  +          +A  L + ++ +
Sbjct: 61  VNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQH 120

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
               +  T+++ LSS      L  G++I     + G +  V + N +++MY KCG + +A
Sbjct: 121 GLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEA 180

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R +FD +  K  VSW   I GY++ G    A ++F  M +  ++PN  T  S+L A S+ 
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            +LK    VHS I+ +G   D ++ + L+  Y KC +  + ++V  ++  ++ +  N + 
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
             L       EA E+Y  +       N  T+ I+L AC     L  GK IH    KA + 
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            DI V++A+I MY +CG+I+DA+  F K+ R  +  W AM+ G A+ G   E   ++ +M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            + GV+P+ +TY ++L +C     +   R     + +  GL         +V++    G 
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGS 479

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPDNESTYVLLS 688
           ++ A+   D+M I  D   + +++     +  G   L L    +   L+PD + TY+ + 
Sbjct: 480 VKDARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPD-KVTYINML 537

Query: 689 NLYASAG 695
           N  A++G
Sbjct: 538 NACANSG 544



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 247/496 (49%), Gaps = 16/496 (3%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  + + L+    Q+N    + +L      + L AG+Q+     +   +      NALI+
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 320 MYGKCGQVNDARSIFDYLIFKDSV--SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           MY +CG + +AR ++  L + +    SWN+M+ GY + G+  +AL +   M +  L P+ 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T+ S L +  +  +L+   ++H   +++G L D  + +C++  Y KC ++ E++ V  +
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 438 IDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           ++KK+ V  +   ++  YA C     A E+++ +       N  T+  VL A ++   L+
Sbjct: 187 MEKKSVV--SWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALK 244

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            GKA+H   L A ++ D  V +A++ MY KCG+ +D ++ F K+    L  WN M+ G A
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           + G + E S ++N+M + GV P++ITY+ +L +C ++  +   +   S ++   G    +
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA-GFTSDI 363

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS--ACTIYGNIDLGLLAGSKL 673
                ++ +  R G ++ A++  D+M +  D   W +++   A + +G   L +    + 
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ 422

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
             ++P N  TY  + N  +S        ++ +++ E  L  +      HVG    + Y+ 
Sbjct: 423 AGVEP-NRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA-----HVGNTLVNMYSM 476

Query: 734 DSSHSQSKEIYKELIK 749
             S   +++++  +I+
Sbjct: 477 CGSVKDARQVFDRMIQ 492


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/762 (32%), Positives = 409/762 (53%), Gaps = 11/762 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  I  G   D I    LI  + K    +RA R       RD +++ A++SG AR   
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              A+ L+ ++   G+ P  +  SS++ AC      ++  +VH    K G  S   + + 
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y + G +  AE  F +    D V +  ++  +   G  + + E+F EMR  G   +
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++ ++L A     D+ +G+Q+H + +K G        +  ++++LYV+CG  ++A+++
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYI--IEGSLLDLYVKCGVIVEALEI 301

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F      +VV W+  + A     D  ++F LF  +     + NE+T   LL +      +
Sbjct: 302 FKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+QI     K GF   + +   LI MY K G ++ AR I + L  KD VSW SMIAGY
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGY 421

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            ++ F  +AL+ F  M  F + P+   +AS + A +  K+++Q  Q+HS +  SG+  D 
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADV 481

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + L+  Y +C    E+  +   I+ K+ +  N + S    +  + EALE++  ++ +
Sbjct: 482 SIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA 541

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + N  TF   + A A + D++QGK IH   +K     +  V +A+I +Y KCG+IEDA
Sbjct: 542 GVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDA 601

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           K  F ++   +   WN ++   +QHG   E  +LF++M + G+KP+++T++ VL +C H 
Sbjct: 602 KMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 661

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GLV E   Y   MS  HG+ P+ +HYAC+VD+LGR G L+ A+  +++MP+  +A +W++
Sbjct: 662 GLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRT 721

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LLSAC ++ NI++G LA   LLEL+P + ++YVLLSN YA  G W     +RK MK++ +
Sbjct: 722 LLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGV 781

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            KEPG SWI V    H F+ GD  H  + +IYK L  L + +
Sbjct: 782 RKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRL 823



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 278/575 (48%), Gaps = 22/575 (3%)

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           ++H   +  G        +  I+ YAK G +  A   F      DNV++ AM+ GY  NG
Sbjct: 63  VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHL 215
             +++  ++ +M   G+    + L++VL A       ++G  +H    K G  S     +
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV--V 180

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AAC-DGVEAFGLFKDLRFNDF 272
            NA++ LY+R G    A ++F E+   D V+++  I+  A C +G  A  +F+++R + +
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             +  T+ +LL++      L  GKQ+ ++  K G      I  +L+ +Y KCG + +A  
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           IF      + V WN M+  Y +     ++ D+FC M+   + PN +T   +L   + +  
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGE 360

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           +    Q+H   IK+GF  D  +   LI  Y K   L++++R+L  ++ K+ V   ++ + 
Sbjct: 361 INLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAG 420

Query: 453 LVYASCHAEALELYRT-----IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            V      EALE ++      IW      +    +  + ACA +  + QG+ IH     +
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWP-----DNIGLASAISACAGIKAMRQGQQIHSRVYVS 475

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            Y  D+ + +A++++Y +CG  ++A   F  I       WN M+ G+AQ G Y E   +F
Sbjct: 476 GYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVF 535

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            KM + GVK +  T+++ +++  +   +++ +   + +    G   + E    ++ L G+
Sbjct: 536 IKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGK 594

Query: 628 VGLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYG 661
            G +E AKM   +M      H+ W +++++C+ +G
Sbjct: 595 CGSIEDAKMQFFEM--SERNHVSWNTIITSCSQHG 627



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 231/468 (49%), Gaps = 16/468 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S L+K G   D I+  +L+  + K      A          +++ +N ++    +  
Sbjct: 265 QLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQIS 324

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               +  LF ++   G+RP+ FT+  L++ C   G +   E +H + +K GF S +Y+  
Sbjct: 325 DLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSG 384

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G +  A          D V++T+M+ GYV +    ++ E F +M+  G+  
Sbjct: 385 VLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWP 444

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   L + + A   +K   +G+QIH      G+ + V   + NA++NLY RCG+  +A  
Sbjct: 445 DNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS--IWNALVNLYARCGRSKEAFS 502

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ I   D ++W+  ++  A  G+  EA  +F  +     + N +T ++ +S+      
Sbjct: 503 LFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLAD 562

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           ++ GKQI A   K G      + NALIS+YGKCG + DA+  F  +  ++ VSWN++I  
Sbjct: 563 IKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITS 622

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM-QVHSHIIKSGFLL 410
            S++G+  +ALD+F  M +  L PN  T   +L A S+   +++ +    S   + G   
Sbjct: 623 CSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHP 682

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
                +C++   G+   L+ +++ + E+     V  NA+    + ++C
Sbjct: 683 RPDHYACVVDILGRAGQLDRARKFVEEM----PVSANAMVWRTLLSAC 726


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/768 (32%), Positives = 412/768 (53%), Gaps = 16/768 (2%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
            +I++ +I++G   D  + T L++ + K      A + +FD    R++I++  +I GLA +
Sbjct: 240  KIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDA-QLIFDKMVERNVISWTVMIGGLAHY 298

Query: 60   CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLV 116
             +   A  LF +++ +G  P+++T+ S++ A    G+L+  + VH   +  G +  + + 
Sbjct: 299  GRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVG 358

Query: 117  SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            +  +  YAKSG I  A + F    + D  ++T M+ G   +G   ++  +F++M+  G  
Sbjct: 359  NALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCL 418

Query: 177  LNEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             N  +  ++L AS           + +H    + GF+S +   + NA++++Y +CG   D
Sbjct: 419  PNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDL--RIGNALIHMYAKCGSIDD 476

Query: 232  AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A  +FD + + DV+SW+  +        G EAF +F  ++      +  T ++LL++ G 
Sbjct: 477  ARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGS 536

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L    ++     + G +    +G+A I MY +CG ++DAR +FD L  +   +WN+M
Sbjct: 537  TDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAM 596

Query: 349  IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            I G ++     +AL +F  M     IP+  T  +IL A  + ++L+   +VHSH   +G 
Sbjct: 597  IGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAG- 655

Query: 409  LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            L+D  + + L+ TY KC  +  +K+V  ++ ++N      +   L    C  +A   +  
Sbjct: 656  LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQ 715

Query: 469  IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
            +       + +T+  +L ACA+   LE  K +H  A+ A    D+ V +A++ MY KCG+
Sbjct: 716  MLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGS 775

Query: 529  IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            I+DA+  F  +    +  W  M+ G AQHG   E  + F KM   G KP+  +Y+AVLT+
Sbjct: 776  IDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTA 835

Query: 589  CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
            C HAGLV E R     M+  +G+ P +EHY C+VDLLGR GLLE A++ I  MPI PD  
Sbjct: 836  CSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDA 895

Query: 649  IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
             W +LL AC  YGN+++   A  + L+L+P + STYVLLSN+YA+ G W     +R  M+
Sbjct: 896  PWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQ 955

Query: 709  EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
             K + KEPG SWI V    H F  GD+SH +SKEIY +L  L E + A
Sbjct: 956  RKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKA 1003



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 175/675 (25%), Positives = 338/675 (50%), Gaps = 22/675 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  +IK+G   +  ++  L+  + +    + A +       ++I  +  +I G A + 
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +  A++++D++R +  +P+  T+ S++KAC    +L+  + +H   ++ GF S V + +
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVET 258

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G I  A++ F   ++ + +++T M+ G    G   ++  +F++M+  G   
Sbjct: 259 ALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIP 318

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N ++  ++L A+      E   ++H   V  G    +   + NA++++Y + G   DA  
Sbjct: 319 NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL--RVGNALVHMYAKSGSIDDARV 376

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL--SSVGGE 289
           +FD +TE D+ SW+  I        G EAF LF  ++ N    N  T +++L  S++   
Sbjct: 377 VFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST 436

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   K +     + GF+  + IGNALI MY KCG ++DAR +FD +  +D +SWN+M+
Sbjct: 437 SALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMM 496

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            G ++NG  ++A  +F  M +  L+P+  T  S+L    ++ +L+   +VH H +++G +
Sbjct: 497 GGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + S  I  Y +C ++++++ +  ++  ++    NA+        C  EAL L+  +
Sbjct: 557 SDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQM 616

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  + +TF  +L A      LE  K +H  A  A    D+ V +A++  Y KCG +
Sbjct: 617 QREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNV 675

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + AK+ F  +   ++  W  M+ G AQHGC H+  + F +M + G+ PD  TY+++L++C
Sbjct: 676 KYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSAC 735

Query: 590 CHAG---LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
              G    V+E   +        GL+  L     +V +  + G ++ A+   D M +  D
Sbjct: 736 ASTGALEWVKEVHNHAVSA----GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERD 790

Query: 647 AHIWQSLLSACTIYG 661
              W  ++     +G
Sbjct: 791 VFSWTVMIGGLAQHG 805



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 248/484 (51%), Gaps = 23/484 (4%)

Query: 174 GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+ ++ FS   +L       D+   +Q+H   +K G    +  ++ N ++ +Y+RCG+  
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNL--YVANKLLRVYIRCGRLQ 170

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A ++FD++ + ++  W+  I    +     +A  ++  +R    Q NE T +++L +  
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L+ GK+I A   + GF   V +  AL++MY KCG + DA+ IFD ++ ++ +SW  
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI G +  G   +A  +F  M     IPN YT  SIL A +++ +L+   +VHSH + +G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             LD  + + L+  Y K  ++++++ V   + +++      +   L       EA  L+ 
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410

Query: 468 TIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            +  +    N +T+  +L A   A+ + LE  K +H  A +A +  D+ + +A+I MY K
Sbjct: 411 QMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAK 470

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG+I+DA+  F  +C   +  WNAMM G AQ+GC HE   +F +M + G+ PD  TYL++
Sbjct: 471 CGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSL 530

Query: 586 LTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           L +         +   L  ++++H      GLI      +  + +  R G ++ A++  D
Sbjct: 531 LNT-------HGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFD 583

Query: 640 QMPI 643
           ++ +
Sbjct: 584 KLSV 587


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/760 (33%), Positives = 427/760 (56%), Gaps = 32/760 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K+G   DP +   LI+ ++K   F  A + + ++   D+++++ALISG A+  
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G AL  F  +   G++ + FTFSS++KAC  +++  I   VHGV +  GF   V++ +
Sbjct: 137 LGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVAN 196

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  E + ++  F +  + + V++ A+   YV      ++  +F EM   G++ 
Sbjct: 197 TLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKP 256

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NEFSL++++ A     D   G+ IHG+ +K+G+     +   NA++++Y + G   DA+ 
Sbjct: 257 NEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS--ANALVDMYAKVGDLADAIS 314

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           +F++I +PD+VSW+  IA                     ++E+    L      E + + 
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCV------------------LHEHHEQAL------ELLGQM 350

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            +Q+ +   K+     + +   L+ MY KC  + DAR  F+ L  KD ++WN++I+GYS+
Sbjct: 351 KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 410

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
                +AL +F  M +  +  N  T+++IL++ +  + +    QVH   +KSGF  D  +
Sbjct: 411 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYV 470

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           ++ LI +YGKC+ + +++R+  E    + V   ++ +         EAL+L+  +     
Sbjct: 471 VNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMEL 530

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + +    S +L ACA ++  EQGK +H   LK  +  DIF  +++++MY KCG+I+DA R
Sbjct: 531 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 590

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
           AF ++    +  W+AM+ G AQHG   +   LFN+M K GV P+ IT ++VL +C HAGL
Sbjct: 591 AFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGL 650

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V EA+ Y   M +L G  P  EHYAC++DLLGR G +  A   +++MP   +A +W +LL
Sbjct: 651 VTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 710

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            A  I+ +++LG  A   L  L+P+   T+VLL+N+YASAG W +V ++R+ M++  + K
Sbjct: 711 GAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKK 770

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           EPG SWI V    + F  GD SH +S+EIY +L +L + M
Sbjct: 771 EPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLM 810



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 267/600 (44%), Gaps = 85/600 (14%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G QIH    K G        + N ++NLY +C     A K+ DE +EPD+VSWS  I
Sbjct: 72  LRPGLQIHAHITKSGLSDDPS--IRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALI 129

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +       G  A   F ++     + NE+T  ++L +    + LR GKQ+       GF 
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V + N L+ MY KC +  D++ +FD +  ++ VSWN++ + Y +  F  +A+ +F  M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEM 249

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +   + PN ++++S++ A +  +   +   +H ++IK G+  D    + L+  Y K   L
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++  V  +I + + V  NA+ +  V    H +ALEL                       
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG--------------------- 348

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
                 +  + +H   +K   + D+FV   ++DMY KC  +EDA+ AF  +    L  WN
Sbjct: 349 ------QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 402

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY--LSCMS 606
           A++ GY+Q+    E  +LF +M K G+  ++ T   +L S     +V   R    LS  S
Sbjct: 403 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 462

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID-- 664
             H  I  +     ++D  G+   +E A+   ++  I  D   + S+++A   YG  +  
Sbjct: 463 GFHSDIYVVN---SLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMITAYAQYGQGEEA 518

Query: 665 LGLLAGSKLLELQPDN---------------------------ESTYVL-------LSNL 690
           L L    + +EL+PD                            +  +VL       L N+
Sbjct: 519 LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNM 578

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSW-IHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           YA  G  +D G+   E+ E+ +      SW   +GG   H +       Q+ +++ +++K
Sbjct: 579 YAKCGSIDDAGRAFSELTERGIV-----SWSAMIGGLAQHGHG-----RQALQLFNQMLK 628



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 186/390 (47%), Gaps = 29/390 (7%)

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           +F     +   LLS     + LR G QI A   K G  +  SI N LI++Y KC     A
Sbjct: 51  NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYA 110

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R + D     D VSW+++I+GY++NG    AL  F  M    +  N +T +S+L+A S  
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           K L+   QVH  ++ SGF  D  + + L+  Y KC+   +SKR+  EI ++N V  NAL 
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S  V      EA+ L+  +  S  + N  + S ++ AC  + D  +GK IH   +K  YD
Sbjct: 231 SCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            D F  +A++DMY K G + DA   F KI +  +  WNA++ G   H  + +   L  +M
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            +                  H+ L++     +   SDL   +        +VD+  +  L
Sbjct: 351 KR----------------QLHSSLMK-----MDMESDLFVSVG-------LVDMYSKCDL 382

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           LE A+M  + +P   D   W +++S  + Y
Sbjct: 383 LEDARMAFNLLP-EKDLIAWNAIISGYSQY 411



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 162/331 (48%), Gaps = 17/331 (5%)

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
           +L FK +      +  +SE+      L++   + + +  P   + + +L     +KSL+ 
Sbjct: 18  HLPFKPAPKLIQTVPQFSEDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRP 74

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
            +Q+H+HI KSG   D S+ + LI  Y KC     +++++ E  + + V  +AL S    
Sbjct: 75  GLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQ 134

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                 AL  +  +     + N  TFS VLKAC+ + DL  GK +H + + + ++ D+FV
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            + ++ MY KC    D+KR F +I   ++  WNA+   Y Q     E   LF +M   G+
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI 254

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLGRVG 629
           KP+E +  +++ +C   GL   +R  +     +HG + +L +         +VD+  +VG
Sbjct: 255 KPNEFSLSSMVNAC--TGLRDSSRGKI-----IHGYLIKLGYDWDPFSANALVDMYAKVG 307

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
            L  A    +++   PD   W ++++ C ++
Sbjct: 308 DLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/756 (33%), Positives = 414/756 (54%), Gaps = 17/756 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  + K G   D +   T+I+ +        A        NR+++ +N +ISG A+  
Sbjct: 247 KVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGG 306

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
               A++ F  +R  G++    T  S++ A  SL   +   +VH   LK G  S VY+ S
Sbjct: 307 YGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGS 366

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             +  YAK G++ +A+  F D L+  NV  + AM+ GYV NG  ++  E+F  M+S G  
Sbjct: 367 SLVSMYAKCGKMEAAKKVF-DTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFY 425

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F+ +++L A   +K    G Q+H   +K  F S +   + NA++++Y + G   DA 
Sbjct: 426 PDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNL--FVGNALVDMYAKSGALEDAR 483

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           + F+ I   D VSW+  I       D VEAF LF+ +       +E ++ ++LS+    R
Sbjct: 484 QQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVR 543

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQ+     K G    +  G++LI MY KCG ++ A  I   +  +  VS N++IA
Sbjct: 544 GLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIA 603

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY++     QA+++F  ML   +     T AS+L+A    + L    Q+HS I+K G  L
Sbjct: 604 GYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQL 662

Query: 411 DDSMISC-LITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRT 468
           DD  +   L+  Y       ++  + SE  + K+AV   A+ S L    C   AL+LY+ 
Sbjct: 663 DDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKE 722

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       + +TF   L+ACA ++ ++ G   H L     +D D    SA++DMY KCG 
Sbjct: 723 MRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGD 782

Query: 529 IEDAKRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           ++ + + F+++ R   +  WN+M++G+A++G   +   +F++M +  V PD++T+L VLT
Sbjct: 783 VKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLT 842

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H+G V E R     M +L+G+ P+ +H AC+VDLLGR G L+ A+  I+++   PDA
Sbjct: 843 ACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDA 902

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W ++L AC I+G+   G  A  KL+EL+P N S YVLLSN+YA++G W++V  LR+EM
Sbjct: 903 KVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREM 962

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           +EK + K PG SWI VG  T+ F AGD SH  + EI
Sbjct: 963 REKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEI 998



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 186/672 (27%), Positives = 321/672 (47%), Gaps = 59/672 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  +K G     +L   ++  + K AD   A R     +++DI+ +N+++S  ++  Q
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSK--Q 138

Query: 62  SGPAL--KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
             P L  K F  L   G+ P+ FTF+ ++ +C  L+       VH   +K+GF S  Y  
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I  YAK   +  A   F   ++LD V++T+M+ GY+  G  +++ +VF EM  +G E
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++ +   V+                                  N YV  G+  +A  +F
Sbjct: 259 PDQVAFVTVI----------------------------------NAYVDLGRLDNASDLF 284

Query: 237 DEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             +   +VV+W+  I+       GVEA   F+++R    +    T+ ++LS++     L 
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G  + A   K G    V +G++L+SMY KCG++  A+ +FD L  ++ V WN+M+ GY 
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG+ N+ +++F +M      P+ +T +SIL A +  K L    Q+HS IIK+ F  +  
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLF 464

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L+  Y K  AL ++++    I  ++ V  N +    V      EA  L+R +    
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              +  + + +L ACA++  LEQGK +HCL++K   +  ++  S++IDMY KCG I+ A 
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           +    +   S+   NA++ GYAQ      V NLF  M   G+   EIT+ ++L +C    
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINLEQAV-NLFRDMLVEGINSTEITFASLLDAC---- 639

Query: 594 LVREARTYLSCMSDLHGLI----PQLEHYACIVDLLG---RVGLLEGAKMTIDQMPIPPD 646
                +  L+    +H LI     QL+     V LLG          A +   +   P  
Sbjct: 640 ---HEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKS 696

Query: 647 AHIWQSLLSACT 658
           A +W +++S  +
Sbjct: 697 AVVWTAMISGLS 708



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 273/549 (49%), Gaps = 38/549 (6%)

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
           N+I+H   LKLGF S+  L +  ++ YAK  ++  AE  F+   D D +A+ +++  +  
Sbjct: 78  NKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSK 137

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCN 213
            G      + F  + + G+  NEF+   VL +      VK G Q+H   VK+GF S   +
Sbjct: 138 QGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFES--IS 195

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQ 273
           +   A++ +Y +C    DA  +FD   E D VSW+  I                      
Sbjct: 196 YCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGG-------------------- 235

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
              Y  + L      E  ++  ++++    +   +  V++ NA + +    G++++A  +
Sbjct: 236 ---YIKVGL-----PEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDL----GRLDNASDL 283

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  ++ V+WN MI+G+++ G+  +A++ F +M +  +     T+ S+L A+++  +L
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAAL 343

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
              + VH+  +K G   +  + S L++ Y KC  +  +K+V   ++++N V  NA+    
Sbjct: 344 DFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGY 403

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V      E +EL+  +       +  T+S +L ACA +  L+ G  +H + +K ++  ++
Sbjct: 404 VQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNL 463

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           FV +A++DMY K G +EDA++ F  I       WN +++GY Q     E  +LF +M+  
Sbjct: 464 FVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLL 523

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G+ PDE++  ++L++C     + + +  + C+S   G   +L   + ++D+  + G ++ 
Sbjct: 524 GILPDEVSLASILSACASVRGLEQGKQ-VHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582

Query: 634 AKMTIDQMP 642
           A   +  MP
Sbjct: 583 AHKILACMP 591



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 49/409 (11%)

Query: 362 LDMFCHMLEFSLIPNGYTMAS----------ILE-AVSNSKSLK---------QAMQ--- 398
           L  F H L FS IPNG    S          IL+  +  SK +K         Q +    
Sbjct: 16  LHSFHHQLTFSAIPNGSNHPSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFS 75

Query: 399 -----VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
                +H+  +K GF     + + ++  Y KC  ++ ++R   +++ K+ +  N++ S+ 
Sbjct: 76  TTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMH 135

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                    ++ +  +W S    N  TF+IVL +CA +  ++ G+ +HC  +K  ++   
Sbjct: 136 SKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESIS 195

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           + E A+I MY KC  + DA+  F          W +M+ GY + G   E   +F +M K 
Sbjct: 196 YCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKV 255

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G +PD++ ++ V+ +    G +  A       SDL   +P     A  + + G      G
Sbjct: 256 GQEPDQVAFVTVINAYVDLGRLDNA-------SDLFSRMPNRNVVAWNLMISGHAKGGYG 308

Query: 634 AK-----MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV--L 686
            +       + +  I        S+LSA      +D GLL  ++ L+ Q  + + YV   
Sbjct: 309 VEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALK-QGLHSNVYVGSS 367

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW-IHVGGYTHHFYAGD 734
           L ++YA  G      K+   + E+ +       W   +GGY  + YA +
Sbjct: 368 LVSMYAKCGKMEAAKKVFDTLNEQNVVL-----WNAMLGGYVQNGYANE 411



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 169/403 (41%), Gaps = 55/403 (13%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           K I A   K+GF     +GN ++ +Y KC  V+ A   F  L  KD ++WNS+++ +S+ 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           GF +  +  F  +    + PN +T A +L + +  + +K   QVH +++K GF   +S+ 
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGF---ESIS 195

Query: 416 SC---LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            C   LI  Y KCN L +++ +                           A+EL +  W S
Sbjct: 196 YCEGALIGMYAKCNFLTDARSIFD------------------------GAVELDKVSWTS 231

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
              + G    + L   A     E  K      +    DQ  FV   VI+ Y   G +++A
Sbjct: 232 ---MIGGYIKVGLPEEAVKVFQEMEK------VGQEPDQVAFV--TVINAYVDLGRLDNA 280

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
              F ++   ++  WN M+ G+A+ G   E    F  M K G+K    T  +VL++    
Sbjct: 281 SDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASL 340

Query: 593 -----GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
                GL+  A           GL   +   + +V +  + G +E AK   D +    + 
Sbjct: 341 AALDFGLLVHAEAL------KQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN-EQNV 393

Query: 648 HIWQSLLSACTI--YGNIDLGLLAGSKLLELQPDNESTYVLLS 688
            +W ++L       Y N  + L    K     PD+ +   +LS
Sbjct: 394 VLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILS 436


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/767 (31%), Positives = 424/767 (55%), Gaps = 13/767 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  +IK+G + D  L  +L++ + K      A +   +   RD++++ ALI+G      
Sbjct: 150 IHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY 209

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              A+ LF  +R +G+  + FT+++ +KAC     L+  + VH   +K+G  S +++ S 
Sbjct: 210 GSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSA 269

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            ++ YAK GE+V AE  F  C+   N V++ A++ G+   G+ +K   +F  M    +  
Sbjct: 270 LVDLYAKCGEMVLAERVFL-CMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINF 328

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++F+L+ VL     S +++ G+ +H   +++G    +   ++  ++++Y +CG   DA+K
Sbjct: 329 SKFTLSTVLKGCANSGNLRAGQIVHSLAIRIG--CELDEFISCCLVDMYSKCGLAGDALK 386

Query: 235 MFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  I +PDVVSWS  I          EA  +FK +R +    N++T+ +L+S+      
Sbjct: 387 VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGD 446

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I A   K GF    ++ NAL++MY K G V D   +F+    +D +SWN++++G
Sbjct: 447 LYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSG 506

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           + +N   +  L +F  ML     PN YT  SIL + S+   +    QVH+ I+K+    +
Sbjct: 507 FHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 566

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           D + + L+  Y K   L +++ + + + K++      + +         +A++ +  +  
Sbjct: 567 DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 626

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + N  T +  L  C+ +  L+ G+ +H +A+KA    D+FV SA++DMY KCG +ED
Sbjct: 627 EGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVED 686

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F  +       WN ++ GY+QHG   +    F  M   G  PDE+T++ VL++C H
Sbjct: 687 AEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 746

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GL+ E + + + +S ++G+ P +EHYAC+VD+LGR G     +  I++M +  +  IW+
Sbjct: 747 MGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWE 806

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           ++L AC ++GNI+ G  A  KL EL+P+ +S Y+LLSN++A+ GMW+DV  +R  M  + 
Sbjct: 807 TVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRG 866

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           + KEPG SW+ V G  H F + D SH + +EI+ +L  L++ +++  
Sbjct: 867 VKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 913



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 305/613 (49%), Gaps = 16/613 (2%)

Query: 84  FSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +S +++ C   G L E + +HG  +K G +   +L +  +  YAK G    A   F +  
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQ 197
           + D V++TA++ G+V  G    +  +F EMR  G+E NEF+    L A     D++ G+Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAA 254
           +H   +KVG  S +   + +A+++LY +CG+ + A ++F  + + + VSW+  +   A  
Sbjct: 251 VHAEAIKVGDFSDL--FVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQM 308

Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            D  +   LF  +  ++   +++T+  +L        LRAG+ + +   ++G      I 
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             L+ MY KCG   DA  +F  +   D VSW+++I    + G   +A ++F  M    +I
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI 428

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN +T+AS++ A ++   L     +H+ + K GF  D+++ + L+T Y K  ++ +  RV
Sbjct: 429 PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
                 ++ +  NAL S           L ++  +       N  TF  +L++C++++D+
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + GK +H   +K   D + FV +A++DMY K   +EDA+  F ++ +  L  W  ++ GY
Sbjct: 549 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 608

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQ G   +    F +M + GVKP+E T  + L+ C     +   R  L  M+   G    
Sbjct: 609 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGD 667

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +   + +VD+  + G +E A++  D + +  D   W +++   + +G     L A   +L
Sbjct: 668 MFVASALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAML 726

Query: 675 E--LQPDNESTYV 685
           +    PD E T++
Sbjct: 727 DEGTVPD-EVTFI 738



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 248/509 (48%), Gaps = 15/509 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  IK G   D  + + L+  + K  +   A R       ++ +++NAL++G A+  
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   L LF R+    +    FT S+++K C   G+L+  +IVH + +++G     ++  
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G    A   F    D D V+++A++      G+  ++ EVF  MR  G+  
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+F+L +++ A+ D+ +   GE IH    K GF     N + NA++ +Y++ G   D  +
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYD--NTVCNALVTMYMKIGSVQDGCR 487

Query: 235 MFDEITEPDVVSWSERIAA-----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F+  T  D++SW+  ++       CD      +F  +    F  N YT I++L S    
Sbjct: 488 VFEATTNRDLISWNALLSGFHDNETCD--TGLRIFNQMLAEGFNPNMYTFISILRSCSSL 545

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             +  GKQ+ A   K        +G AL+ MY K   + DA +IF+ LI +D  +W  ++
Sbjct: 546 SDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIV 605

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           AGY+++G   +A+  F  M    + PN +T+AS L   S   +L    Q+HS  IK+G  
Sbjct: 606 AGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQS 665

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + S L+  Y KC  + +++ V   +  ++ V  N +           +AL+ +  +
Sbjct: 666 GDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM 725

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                  +  TF  VL AC+ M  +E+GK
Sbjct: 726 LDEGTVPDEVTFIGVLSACSHMGLIEEGK 754



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 222/451 (49%), Gaps = 15/451 (3%)

Query: 258 VEAFGLFKDLRFNDF-QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
           VE   +++ L F+   ++ +Y+   +L +   +  L  GK I     K G      + N+
Sbjct: 111 VEKKRIWRGLDFDSKGRLRQYS--GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS 168

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L+++Y KCG  N A  +F  +  +D VSW ++I G+   G+ + A+++FC M    +  N
Sbjct: 169 LVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEAN 228

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            +T A+ L+A S    L+   QVH+  IK G   D  + S L+  Y KC  +  ++RV  
Sbjct: 229 EFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFL 288

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF--SIVLKACAAMTDL 494
            + K+NAV  NAL +         + L L+  + GS  E+N S F  S VLK CA   +L
Sbjct: 289 CMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGS--EINFSKFTLSTVLKGCANSGNL 346

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             G+ +H LA++   + D F+   ++DMY KCG   DA + F +I    +  W+A++   
Sbjct: 347 RAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCL 406

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
            Q G   E + +F +M   GV P++ T  +++++    G +    +  +C+   +G   +
Sbjct: 407 DQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCK-YGF--E 463

Query: 615 LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
            ++  C  +V +  ++G ++     + +     D   W +LLS        D GL   ++
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDG-CRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQ 522

Query: 673 LLELQPDNESTYVLLSNLYASAGMWN-DVGK 702
           +L  +  N + Y  +S L + + + + D+GK
Sbjct: 523 MLA-EGFNPNMYTFISILRSCSSLSDVDLGK 552


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/727 (32%), Positives = 404/727 (55%), Gaps = 12/727 (1%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD    RD++++N+LISG          + +F ++   G   D  TF+ ++K+C SL++
Sbjct: 130 LFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLED 189

Query: 97  NE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           +     +HG+ +K+GF   V   S  ++ YAK  ++  +   F    + + V+++A++ G
Sbjct: 190 HGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAG 249

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSG 210
            V N +     E+F EM+  G+ +++ +  +V  +   +   + G Q+HG  +K  F + 
Sbjct: 250 CVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTD 309

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL 267
           V   +  A +++Y++C    DA K+F+ +   ++ S++  I   A +  G+EA G+F+ L
Sbjct: 310 VV--IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLL 367

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           + +   ++E ++     +    +    G Q+     K      + + NA++ MYGKCG +
Sbjct: 368 QKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 427

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            +A  +F+ ++ +D+VSWN++IA + +NG   + L +F  ML+  + P+ +T  S+L+A 
Sbjct: 428 VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC 487

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +  ++L   M++H+ IIKS   LD  +   LI  Y KC  + +++++   + ++  V  N
Sbjct: 488 AGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 547

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           A+ S         EA + +  +     + +  T++ +L  CA +  +E GK IH   +K 
Sbjct: 548 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 607

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
               D ++ S ++DMY KCG ++D +  F K        WNAM+ GYAQHG   E   +F
Sbjct: 608 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF 667

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M    VKP+  T+LAVL +C H GLV +   Y   M   +GL PQLEHY+C+VD++GR
Sbjct: 668 EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGR 727

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G +  A   I+ MP   DA IW++LLS C I+GN+++   A   +L+L+P++ + YVLL
Sbjct: 728 SGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLL 787

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+YA+AGMWN+V KLRK M+   L KEPG SWI +    H F  GD +H +SKEIY+ L
Sbjct: 788 SNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENL 847

Query: 748 IKLYEHM 754
             L + M
Sbjct: 848 DVLTDEM 854



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 273/552 (49%), Gaps = 24/552 (4%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YA  G+I  A+  F    + D V++ +++ GY+ NG+  K  +VF++M  +G   +  + 
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177

Query: 183 TAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDE 238
             VL +   +++   G QIHG  VK+GF   V     +A++++Y +C +KLD +++ F  
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT--GSALLDMYAKC-KKLDCSIQFFHS 234

Query: 239 ITEPDVVSWSERIAAACDGVEAFG---LFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + E + VSWS  IA      +  G   LFK+++     +++ T  ++  S  G   LR G
Sbjct: 235 MPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
            Q+     K  F   V IG A + MY KC  ++DA+ +F+ L   +  S+N++I GY+ +
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
               +AL MF  + +  L  +  +++    A +  K   + +QVH   +KS    +  + 
Sbjct: 355 DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 414

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + ++  YGKC AL E+  V  E+  ++AV  NA+ +         + L L+  +  S  E
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T+  VLKACA    L  G  IH   +K+R   D FV  A+IDMY KCG +E A++ 
Sbjct: 475 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL 534

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
             ++   ++  WNA++ G++      E    F+KM + GV PD  TY  +L +C +   V
Sbjct: 535 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 594

Query: 596 REARTYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
              +        +H  I + E        + +VD+  + G ++  ++  ++ P   D   
Sbjct: 595 ELGK-------QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-NRDFVT 646

Query: 650 WQSLLSACTIYG 661
           W +++     +G
Sbjct: 647 WNAMVCGYAQHG 658



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 263/542 (48%), Gaps = 12/542 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L +K G   D +  + L+  + K      + +F      ++ ++++A+I+G  +  
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQND 254

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                L+LF  ++  G+     TF+S+ ++C  L    +   +HG  LK  F + V + +
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   +  A+  F    + +  +Y A++ GY  + +  ++  +F  ++  GL L
Sbjct: 315 ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 374

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+    A   +K   EG Q+HG  +K    S +C  + NAI+++Y +CG  ++A  
Sbjct: 375 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNIC--VANAILDMYGKCGALVEACL 432

Query: 235 MFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+E+   D VSW+  IAA   +G E     LF  +  +  + +E+T  ++L +  G + 
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G +I     K        +G ALI MY KCG +  A  + D L  +  VSWN++I+G
Sbjct: 493 LNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 552

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +S      +A   F  MLE  + P+ +T A+IL+  +N  +++   Q+H+ IIK     D
Sbjct: 553 FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 612

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y KC  + + + +  +   ++ V  NA+           EAL+++  +  
Sbjct: 613 AYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQL 672

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
              + N +TF  VL+AC  M  +E+G    H +      D  +   S V+D+  + G + 
Sbjct: 673 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 732

Query: 531 DA 532
            A
Sbjct: 733 KA 734



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 211/466 (45%), Gaps = 54/466 (11%)

Query: 264 FKDLRFNDFQ------INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           FK L  + F         + T  ++       + L  GKQ  A      F   V + N L
Sbjct: 24  FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCL 83

Query: 318 ISMYGKC-------------------------------GQVNDARSIFDYLIFKDSVSWN 346
           I MY KC                               G +  A+ +FD +  +D VSWN
Sbjct: 84  IQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWN 143

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I+GY  NG   + +D+F  M     + +  T A +L++ S+ +     +Q+H   +K 
Sbjct: 144 SLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM 203

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  D    S L+  Y KC  L+ S +    + +KN V  +A+ +  V        LEL+
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           + +  +   V+ STF+ V ++CA ++ L  G  +H  ALK  +  D+ + +A +DMY KC
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
             + DA++ F  +   +L  +NA+++GYA+     E   +F  + K G+  DE++     
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYAC----IVDLLGRVGLLEGAKMTIDQ 640
            +C    +++     L     +HGL  +   +   C    I+D+ G+ G L  A +  ++
Sbjct: 384 RAC---AVIKGDLEGLQ----VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 436

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTY 684
           M +  DA  W ++++A    GN +  L     +L+  ++PD E TY
Sbjct: 437 M-VSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD-EFTY 480


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/757 (31%), Positives = 408/757 (53%), Gaps = 24/757 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK----LF 69
           D I   T+IS +    +   A  F +DT  RD++++N+++SG   F Q+G   K      
Sbjct: 108 DVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSG---FLQNGECRKSIDVFL 164

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKS 126
           D  R + +  D  TF+ ++KAC  L++  +   VHG+ +++GF   V   S  ++ YAK 
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE------F 180
             +  +   F +    + V ++A++ G V N E     E+F EM+ +G+ +++      F
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
              A L A   +K G Q+H   +K  F S +   +  A +++Y +CG   DA ++F+ + 
Sbjct: 285 RSCAGLSA---LKVGTQLHAHALKCDFGSDIT--VGTATLDMYAKCGSLADAQRIFNSLP 339

Query: 241 EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           +  +  ++  I        G EA   F+ L  +    NE ++    S+    +    G+Q
Sbjct: 340 KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ 399

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + +   K      + + N+++ MYGKC  +++A  +FD +  +D+VSWN++IA + +NG 
Sbjct: 400 LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             + L++F  ML   + P+ +T  S+L+A S+ ++L   M++H+ IIKSG  LD  +   
Sbjct: 460 EEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGA 519

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y KC  + E+K++   I+++  V  NA+ +         +A   +  +     + +
Sbjct: 520 LIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPD 579

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T++IVL ACA +  +  GK IH   +K     D+++ S ++DMY KCG ++D+   F 
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFE 639

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           K        WNAM+ GYAQHG   E    F +M    V+P+  T++++L +C H G + +
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDK 699

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y + M   +GL PQ+EHY+C++D++GR G +  A   I +MP   DA IW++LLS C
Sbjct: 700 GLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSIC 759

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+GNI++   A + +L+L+P++ S  +LLSN+YA AGMW  V ++RK M+   L KEPG
Sbjct: 760 KIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPG 819

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SWI V    H F  G+ +H + +EIYK L  L + M
Sbjct: 820 CSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEM 856



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 177/654 (27%), Positives = 309/654 (47%), Gaps = 64/654 (9%)

Query: 83  TFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           TFS +++ C    SL+  +  H   +  GF   VY+ +  ++ Y +   +  A   F   
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 140 LDLDNVAYTAMVCGYV----------------------W---------NGEFDKSKEVFV 168
              D ++Y  M+ GY                       W         NGE  KS +VF+
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 169 EM-RSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           +M RS  +  ++ +   VL A   +++G    Q+HG  V++GF   V     +A++++Y 
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVT--GSALLDMYA 222

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMIN 281
           +C +  D++K+F EI   + V WS  IA      E      LFK+++     +++    +
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +  S  G   L+ G Q+ A   K  F   +++G A + MY KCG + DA+ IF+ L    
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342

Query: 342 SVSWNSMIAG--YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
              +N++I G   +E GF  +AL  F  +L+  L  N  +++    A ++ K      Q+
Sbjct: 343 LQCYNAIIVGCVRNEKGF--EALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQL 400

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           HS  +KS    +  + + ++  YGKC AL+E+  +  E+++++AV  NA+ +        
Sbjct: 401 HSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNE 460

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            E L L+ ++     E +  T+  VLKAC++   L  G  IH   +K+    D FV  A+
Sbjct: 461 EETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGAL 520

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           IDMYCKCG IE+AK+   +I + ++  WNA++ G+       +  + F +M K  VKPD 
Sbjct: 521 IDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDN 580

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEG 633
            TY  VL +C +   V   +        +HG I +LE +      + +VD+  + G ++ 
Sbjct: 581 FTYAIVLDACANLASVGLGK-------QIHGQIIKLELHSDVYITSTLVDMYSKCGNMQD 633

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPDNESTYV 685
           + +  ++ P   D   W +++     +  G   LG     +L  ++P N +T+V
Sbjct: 634 SALVFEKAP-NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRP-NHATFV 685



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 265/551 (48%), Gaps = 16/551 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+++ G + D +  + L+  + K      + +   +   ++ + ++A+I+G  +  
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQND 256

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    L+LF  ++  G+      ++S+ ++C  L   ++   +H   LK  F S + + +
Sbjct: 257 EHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGT 316

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G +  A+  F          Y A++ G V N +  ++ + F  +   GL  
Sbjct: 317 ATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE SL+    A   +K   +G Q+H   VK    S +C  + N+I+++Y +C    +A  
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNIC--VANSILDMYGKCEALSEACC 434

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           MFDE+   D VSW+  IAA     +  E   LF  +     + +++T  ++L +   ++ 
Sbjct: 435 MFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQA 494

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L +G +I     K G      +G ALI MY KCG + +A+ I D +  +  VSWN++IAG
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAG 554

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++       A   F  ML+ S+ P+ +T A +L+A +N  S+    Q+H  IIK     D
Sbjct: 555 FTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSD 614

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y KC  + +S  V  +   K+ V  NA+           EAL  +  +  
Sbjct: 615 VYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQL 674

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGT 528
                N +TF  +L+ACA M  +++G  +H   A+   Y  +  +E  S +ID+  + G 
Sbjct: 675 ENVRPNHATFVSILRACAHMGFIDKG--LHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGR 732

Query: 529 IEDAKRAFRKI 539
           I +A +  +++
Sbjct: 733 ISEALKLIQEM 743



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 168/361 (46%), Gaps = 13/361 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL +K+    +  ++ +++  + K      A     + + RD +++NA+I+   +  
Sbjct: 399 QLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNG 458

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
                L LF  +    + PD FT+ S++KAC S   L     +H   +K G     ++  
Sbjct: 459 NEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGG 518

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G I  A+           V++ A++ G+      + +   F EM  + ++ 
Sbjct: 519 ALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKP 578

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+   VL A  ++     G+QIHG  +K+   S V  ++ + ++++Y +CG   D+  
Sbjct: 579 DNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDV--YITSTLVDMYSKCGNMQDSAL 636

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F++    D V+W+  I        G EA G F+ ++  + + N  T +++L +      
Sbjct: 637 VFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGF 696

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G     A   + G    +   + +I + G+ G++++A  +   + F+ D+V W +++
Sbjct: 697 IDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLL 756

Query: 350 A 350
           +
Sbjct: 757 S 757


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/748 (32%), Positives = 408/748 (54%), Gaps = 11/748 (1%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           I+   LI  + K    RRA R   +   RD +++ A++SG A+      A++L+  +   
Sbjct: 78  IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS 137

Query: 76  GLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+ P  +  SS++ AC      Q   ++H    K GF S  ++ +  I  Y +      A
Sbjct: 138 GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLA 197

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF-- 190
           +  F D L  D+V +  ++ G+   G  D++  +F EM+  GL  +  ++ ++L A    
Sbjct: 198 DRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257

Query: 191 -DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
            D+++G+Q+H + +K G    +   +  ++++LYV+ G   +A+++FD     +VV W+ 
Sbjct: 258 GDLRKGKQLHSYLLKAGM--SLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNL 315

Query: 250 RIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            + A     D  ++F +F  +     + N++T   +L +      +  G+QI +   K G
Sbjct: 316 MLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG 375

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F   + +   LI MY K G ++ A+ I D +  KD VSW SMIAGY ++ F  +AL+ F 
Sbjct: 376 FQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFK 435

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M    + P+   +AS + A +  K++ Q  Q+H+ +  SG+  D S+ + L+  Y +C 
Sbjct: 436 EMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCG 495

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
              E+      I+ K  +  N L S    +  + EAL+++  +  +  + N  TF   + 
Sbjct: 496 ISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSIS 555

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           A A + D++QGK IH   +K  Y  +  + +A+I +Y KCG+IEDAK  F ++ + +   
Sbjct: 556 ASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVS 615

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN ++   +QHG   E  +LF++M + G+KP ++T++ VLT+C H GLV E   Y   MS
Sbjct: 616 WNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMS 675

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           + HG+ P+ +HYAC+VD+LGR G L+ AK  +++MPIP D+ +W++LLSAC ++ N+++G
Sbjct: 676 NEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIG 735

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
             A   LLEL+P + ++YVLLSN YA  G W    ++RK MK++ + KEPG SWI V   
Sbjct: 736 EFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNV 795

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHM 754
            H F+ GD  H  + +IY  L  L + +
Sbjct: 796 VHAFFVGDRLHPLADQIYNFLSHLNDRL 823



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/566 (28%), Positives = 281/566 (49%), Gaps = 23/566 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  + K G   +  +   LIS + +   FR A R   D    D +T+N LISG A+   
Sbjct: 165 IHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGH 224

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL +FD ++  GL PD+ T +SL+ AC   G L++ + +H   LK G S    +   
Sbjct: 225 GDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            ++ Y KSG+I  A   F D  D  NV  +  M+  Y    +  KS ++F  M + G+  
Sbjct: 285 LLDLYVKSGDIEEALQIF-DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRP 343

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+F+   +L       E   GEQIH   +K GF S +  +++  ++++Y + G    A +
Sbjct: 344 NKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM--YVSGVLIDMYSKYGWLDKAQR 401

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           + D I E DVVSW+  IA         EA   FK+++      +   + + +S+  G + 
Sbjct: 402 ILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKA 461

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G QI A  Y  G+   VSI N L+ +Y +CG   +A S F+ +  K+ ++WN +I+G
Sbjct: 462 VHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISG 521

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++++G + +AL +F  M +     N +T  S + A +N   +KQ  Q+H+ +IK+G+  +
Sbjct: 522 FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE 581

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI+ YGKC ++ ++K    E+ K+N V  N + +         EAL+L+  +  
Sbjct: 582 TEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQ 641

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKCG 527
              + +  TF  VL AC+ +  +E+G    C       +  I       + V+D+  + G
Sbjct: 642 QGLKPSDVTFVGVLTACSHVGLVEEGL---CYFKSMSNEHGIHPRPDHYACVVDILGRAG 698

Query: 528 TIEDAKRAFRK--ICRDSLAGWNAMM 551
            ++ AKR   +  I  DS+  W  ++
Sbjct: 699 QLDRAKRFVEEMPIPADSMV-WRTLL 723



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 299/629 (47%), Gaps = 14/629 (2%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQENEIV-- 100
           R   ++N  ++G          L LF     Q +   A  F+  ++AC GS +   +V  
Sbjct: 4   RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPE 63

Query: 101 -HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
            H   +  G S    + +  I+ YAK G +  A   F +    DNV++ A++ GY  NG 
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLN 216
            +++  ++ EM   G+    + L+++L A       + G  IH    K GF S     + 
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE--TFVG 181

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AAC-DGVEAFGLFKDLRFNDFQ 273
           NA+++LY+RC     A ++F ++   D V+++  I+  A C  G  A G+F +++ +   
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLS 241

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T+ +LL++      LR GKQ+ ++  K G      +  +L+ +Y K G + +A  I
Sbjct: 242 PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQI 301

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD     + V WN M+  Y +     ++ D+F  ML   + PN +T   +L   +++  +
Sbjct: 302 FDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEI 361

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               Q+HS  IK+GF  D  +   LI  Y K   L++++R+L  I++K+ V   ++ +  
Sbjct: 362 GLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGY 421

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V      EALE ++ +       +    +  + ACA +  + QG  IH     + Y  D+
Sbjct: 422 VQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADV 481

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            + + ++ +Y +CG  ++A  +F  I       WN ++ G+AQ G Y E   +F KM + 
Sbjct: 482 SIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQA 541

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G K +  T+++ +++  +   +++ +   + +    G   + E    ++ L G+ G +E 
Sbjct: 542 GAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSIED 600

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           AKM   +M    +   W ++++ C+ +G 
Sbjct: 601 AKMDFFEMTKRNEVS-WNTIITCCSQHGR 628



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 230/449 (51%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q++S L+K G  LD I+  +L+  + K  D   A + +FD+ +R +++ +N ++    + 
Sbjct: 265 QLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ-IFDSGDRTNVVLWNLMLVAYGQI 323

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                +  +F R+   G+RP+ FT+  +++ C   G +   E +H + +K GF S +Y+ 
Sbjct: 324 DDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS 383

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I+ Y+K G +  A+       + D V++T+M+ GYV +    ++ E F EM++ G+ 
Sbjct: 384 GVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +   L + + A   +K   +G QIH      G+ + V   + N ++ LY RCG   +A 
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVS--IWNGLVYLYARCGISKEAF 501

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             F+ I   + ++W+  I+  A  G+  EA  +F  +     + N +T ++ +S+     
Sbjct: 502 SSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLA 561

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            ++ GKQI A   K G+     I NALIS+YGKCG + DA+  F  +  ++ VSWN++I 
Sbjct: 562 DIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIIT 621

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM-QVHSHIIKSGFL 409
             S++G   +ALD+F  M +  L P+  T   +L A S+   +++ +    S   + G  
Sbjct: 622 CCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIH 681

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
                 +C++   G+   L+ +KR + E+
Sbjct: 682 PRPDHYACVVDILGRAGQLDRAKRFVEEM 710



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 186/369 (50%), Gaps = 27/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+SL IKNG   D  +S  LI  ++K+    +A R L   + +D++++ ++I+G  +  
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHE 425

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
           FC+   AL+ F  ++  G+ PD    +S + AC  ++   +   +H      G+S+ V +
Sbjct: 426 FCKE--ALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI 483

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +G +  YA+ G    A   F      + + +  ++ G+  +G ++++ +VF++M   G 
Sbjct: 484 WNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA 543

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + N F+  + + AS    D+K+G+QIH   +K G+ S     ++NA+++LY +CG   DA
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSE--TEISNALISLYGKCGSIEDA 601

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F E+T+ + VSW+  I        G+EA  LF  ++    + ++ T + +L++    
Sbjct: 602 KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHV 661

Query: 290 RILRAGKQIQAFCY------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDS 342
            ++  G      CY      + G          ++ + G+ GQ++ A+   + + I  DS
Sbjct: 662 GLVEEG-----LCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADS 716

Query: 343 VSWNSMIAG 351
           + W ++++ 
Sbjct: 717 MVWRTLLSA 725


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/753 (31%), Positives = 408/753 (54%), Gaps = 11/753 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +  G     I+   LI  ++K      A R   +   RD +++ A++SG A+  
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL L+ ++   G+ P  +  SS++ +C   +   +  ++H    K GF S +++ +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y + G    AE  F D    D V +  ++ G+   G  + + E+F EM+  GL  
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +++++L A     D+++G Q+H +  K G  S     +  ++++LYV+CG    A+ 
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI--MEGSLLDLYVKCGDVETALV 300

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     +VV W+  + A     D  ++F LF  ++    + N++T   +L +    R 
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI +   K GF   + +   LI MY K G +  AR + + L  KD VSW SMIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++     AL  F  M +  + P+   +AS +   +   +++Q +Q+H+ I  SG+  D
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y +C  + E+     EI+ K+ +  N L S    +  H EAL+++  +  
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + N  TF   L A A + +++QGK IH   +K  +  +  V +A+I +Y KCG+ ED
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++   +   WN ++   +QHG   E  +LF++M K G+KP+++T++ VL +C H
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E  +Y   MSD +G+ P+ +HYAC++D+ GR G L+ AK  I++MPI  DA +W+
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NI++G  A   LLEL+P + ++YVLLSN YA    W +  ++RK M+++ 
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + KEPG SWI V    H F+ GD  H  +++IY
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 813



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 6/372 (1%)

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
           G  R  +   +I A     G  +   +GN LI +Y K G V  AR +F+ L  +D+VSW 
Sbjct: 53  GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV 112

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M++GY++NG   +AL ++  M    ++P  Y ++S+L + + ++   Q   +H+   K 
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC-HAE-ALE 464
           GF  +  + + +IT Y +C +   ++RV  ++  ++ V  N L S   +A C H E ALE
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG--HAQCGHGEHALE 230

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           ++  +  S    +  T S +L ACA++ DL++G  +H    KA    D  +E +++D+Y 
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG +E A   F    R ++  WN M++ + Q     +   LF +M   G++P++ TY  
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C     + +    +  +S   G    +     ++D+  + G LE A+  ++ +   
Sbjct: 351 ILRTCTCTREI-DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-E 408

Query: 645 PDAHIWQSLLSA 656
            D   W S+++ 
Sbjct: 409 KDVVSWTSMIAG 420


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/763 (31%), Positives = 418/763 (54%), Gaps = 11/763 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +  G   D ++   LI  + K     +A +   +  +RD +++ A++SG A+  
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSL-QENEIVHGVCLKLGFSSRVYLVS 117
               A +L+ ++ +  + P  +  SS++ AC  G L  +  ++H    K  F S  ++ +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y   G    AE  F D L  D V +  ++ G+   G  + + ++F EM+  GL  
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A     D+++G+Q+H + +K G           ++++LYV+CG    A  
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT--EGSLLDLYVKCGDIETAHD 301

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     +VV W+  + A     D  ++F +F  ++      N++T   +L +      
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQ 361

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI +   K GF   + +   LI MY K G ++ AR I + L  +D VSW SMIAG
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG 421

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++ F  +AL  F  M +  + P+   +AS   A +  K+++Q +Q+H+ +  SG+  D
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y +C    E+  +  EI+ K+ +  N L S    +  + +AL ++  +  
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQ 541

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  + N  TF   + A A + D++QGK +H  A+K  +  +  V +A+I +Y KCG+IED
Sbjct: 542 AGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIED 601

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++   +   WN ++   +QHG   E  +LF++M + G+KP+++T++ VL +C H
Sbjct: 602 AKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 661

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E  +Y   MS+++GL P  +HYAC+VD+LGR G L+ A+  +D+MPI  +A IW+
Sbjct: 662 VGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWR 721

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NI++G LA   LLEL+P + ++YVLLSN YA  G W +  ++RK MK++ 
Sbjct: 722 TLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRG 781

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + KEPG SWI V    H F+ GD  H  S +IYK L +L + +
Sbjct: 782 IRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL 824



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 155/370 (41%), Gaps = 44/370 (11%)

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           +++H+  +  G   D  + + LI  Y K   + ++++V  E+  ++ V   A+ S    +
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EA  LY  +  +         S VL AC       QG+ IH    K  +  + FV 
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+I +Y   G+ + A+R F  +       +N ++ G+AQ G       +F++M   G++
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242

Query: 577 PDEITYLAVLTSCCHAGLVREAR---TYL------------SCMSDLHGLIPQLEHYACI 621
           PD +T  ++L +C   G +++ +   +YL              + DL+     +E    I
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302

Query: 622 VDL---------------LGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLSACTIYGNI 663
            +L                G++  L  +     QM    I P+   +  +L  CT  G I
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362

Query: 664 DLGLLAGSKLLELQPDNES-TYV--LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           +LG    S  L ++   ES  YV  +L ++Y+  G  +   K+  EM E    K    SW
Sbjct: 363 ELGEQIHS--LSIKNGFESDMYVSGVLIDMYSKYGCLDKARKIL-EMLE----KRDVVSW 415

Query: 721 IH-VGGYTHH 729
              + GY  H
Sbjct: 416 TSMIAGYVQH 425


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/753 (31%), Positives = 408/753 (54%), Gaps = 11/753 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +  G     I+   LI  ++K      A R   +   RD +++ A++SG A+  
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL L+ ++   G+ P  +  SS++ +C   +   +  ++H    K GF S +++ +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y + G    AE  F D    D V +  ++ G+   G  + + E+F EM+  GL  
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +++++L A     D+++G Q+H +  K G  S     +  ++++LYV+CG    A+ 
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI--MEGSLLDLYVKCGDVETALV 300

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     +VV W+  + A     D  ++F LF  ++    + N++T   +L +    R 
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI +   K GF   + +   LI MY K G +  AR + + L  KD VSW SMIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++     AL  F  M +  + P+   +AS +   +   +++Q +Q+H+ I  SG+  D
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y +C  + E+     EI+ K+ +  N L S    +  H EAL+++  +  
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + N  TF   L A A + +++QGK IH   +K  +  +  V +A+I +Y KCG+ ED
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++   +   WN ++   +QHG   E  +LF++M K G+KP+++T++ VL +C H
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E  +Y   MSD +G+ P+ +HYAC++D+ GR G L+ AK  I++MPI  DA +W+
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NI++G  A   LLEL+P + ++YVLLSN YA    W +  ++RK M+++ 
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + KEPG SWI V    H F+ GD  H  +++IY
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 813



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 6/372 (1%)

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
           G  R  +   +I A     G  +   +GN LI +Y K G V  AR +F+ L  +D+VSW 
Sbjct: 53  GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV 112

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M++GY++NG   +AL ++  M    ++P  Y ++S+L + + ++   Q   +H+   K 
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC-HAE-ALE 464
           GF  +  + + +IT Y +C +   ++RV  ++  ++ V  N L S   +A C H E ALE
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG--HAQCGHGEHALE 230

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           ++  +  S    +  T S +L ACA++ DL++G  +H    KA    D  +E +++D+Y 
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG +E A   F    R ++  WN M++ + Q     +   LF +M   G++P++ TY  
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C     + +    +  +S   G    +     ++D+  + G LE A+  ++ +   
Sbjct: 351 ILRTCTCTREI-DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-E 408

Query: 645 PDAHIWQSLLSA 656
            D   W S+++ 
Sbjct: 409 KDVVSWTSMIAG 420


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/766 (32%), Positives = 410/766 (53%), Gaps = 15/766 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           +++  +I++   LD      LI+ + +     + R+ +  L  T+ R + ++NA++ G  
Sbjct: 162 EVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE-RTVHSWNAMVVGYV 220

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
           ++     ALKL   ++  GL     T   L+ +C S   L+    +H   +K      V 
Sbjct: 221 QYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVN 280

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  YAK G I  A   F        V++T ++ GY   G  + + E+F +M+  G
Sbjct: 281 VANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG 340

Query: 175 LELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  +   VL A      +K G+ +H   +  G  S +   +  A++ +Y +CG   D
Sbjct: 341 VVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLA--VGTALVKMYAKCGSYKD 398

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             ++F+++   D+++W+  I    +G    EA  ++  ++      N+ T + LL++   
Sbjct: 399 CRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVN 458

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G++I +   K GFM  +S+ NALISMY +CG + DAR +F+ ++ KD +SW +M
Sbjct: 459 PTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAM 518

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I G +++G   +AL +F  M +  L PN  T  SIL A S+  +L    ++H  +I++G 
Sbjct: 519 IGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL 578

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D  + + L+  Y  C ++ ++++V   + +++ V  NA+       +   EAL+L+  
Sbjct: 579 ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDR 638

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + +  T+  +L ACA    LE  K IH L LK  Y  D  + +A++  Y KCG+
Sbjct: 639 LQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGS 698

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
             DA   F K+ + ++  WNA++ G AQHG   +V  LF +M   G+KPD +T++++L++
Sbjct: 699 FSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSA 758

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGL+ E R Y   MS   G+ P +EHY C+VDLLGR G L+  +  I  MP   +  
Sbjct: 759 CSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTR 818

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW +LL AC I+GN+ +   A    L+L PDN + YV LS++YA+AGMW+   KLRK M+
Sbjct: 819 IWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLME 878

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           ++ + KEPG SWI VG   H+F A D SH +S++IY EL KL   M
Sbjct: 879 QRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAM 924



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 163/337 (48%), Gaps = 11/337 (3%)

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
           ++A+D+  ++ +     N      +L+     K L    +VH HII+   +LD   ++ L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 419 ITTYGKCNALNESKRVLSEID-KKNAVH-INALASVLVYASCHAEALELYRTIWGSCREV 476
           I  Y +C ++ E+++V ++++  +  VH  NA+    V      EAL+L R +      +
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
             +T   +L +C + + LE G+ IH  A+KAR   D+ V + +++MY KCG+I +A+  F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
            K+   S+  W  ++ GYA  G       +F KM + GV P+ ITY+ VL +      ++
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             +T  S + +  G    L     +V +  + G  +  +   +++ +  D   W +++  
Sbjct: 363 WGKTVHSHILNA-GHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGG 420

Query: 657 CTIYGNIDLGLLAGSKLLELQPD----NESTYVLLSN 689
               GN +    A     ++Q +    N+ TYV+L N
Sbjct: 421 LAEGGNWE---EASEIYHQMQREGMMPNKITYVILLN 454


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/768 (31%), Positives = 414/768 (53%), Gaps = 16/768 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +I++ +I++G   D  + T L++ + K      A + +FD    R++I++  +I GLA +
Sbjct: 51  KIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDA-QLIFDKMVERNVISWTVMIGGLAHY 109

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLV 116
            +   A   F +++ +G  P+++T+ S++ A    G+L+  + VH   +  G +  + + 
Sbjct: 110 GRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVG 169

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAKSG I  A + F   ++ D  ++T M+ G   +G   ++  +F++M   G  
Sbjct: 170 NALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL 229

Query: 177 LNEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            N  +  ++L AS     G     +++H    K GF+S +   + NA++++Y +CG   D
Sbjct: 230 PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDL--RVGNALIHMYAKCGSIDD 287

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD + + DV+SW+  I        G EAF +F  ++   F  +  T ++LL++   
Sbjct: 288 ARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVS 347

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                  K++     +VG +  + +G+A + MY +CG ++DA+ IFD L  ++  +WN+M
Sbjct: 348 TGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAM 407

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I G ++     +AL +F  M      P+  T  +IL A    ++L+   +VHS+ I +G 
Sbjct: 408 IGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAG- 466

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           L+D  + + L+  Y KC     +K+V  ++ ++N      + S L    C  EA  L+  
Sbjct: 467 LVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQ 526

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       + +T+  +L ACA+   LE  K +H  A+ A    D+ V +A++ MY KCG+
Sbjct: 527 MLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGS 586

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++DA+R F  +    +  W  M+ G AQHG   +  +LF KM   G KP+  +++AVL++
Sbjct: 587 VDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSA 646

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGLV E R     ++  +G+ P +EHY C+VDLLGR G LE AK  I  MPI P   
Sbjct: 647 CSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDA 706

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W +LL AC  YGN+++   A  + L+L+P + STYVLLSN+YA+ G W     +R  M+
Sbjct: 707 PWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQ 766

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            + + KEPG SWI V    H F  GD+SH +SKEIY +L  L + + A
Sbjct: 767 RRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKA 814



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 178/650 (27%), Positives = 326/650 (50%), Gaps = 18/650 (2%)

Query: 52  LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG 108
           +I G A +  +  A+K++ ++R +G +P+  T+ S++KAC    SL+  + +H   ++ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
           F S V + +  +  Y K G I  A++ F   ++ + +++T M+ G    G   ++   F+
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 169 EMRSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +M+  G   N ++  ++L A+      E   ++H   V  G    +   + NA++++Y +
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL--RVGNALVHMYAK 178

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINL 282
            G   DA  +FD + E D+ SW+  I        G EAF LF  +       N  T +++
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 283 L--SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           L  S++     L   K++     K GF+  + +GNALI MY KCG ++DAR +FD +  +
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D +SWN+MI G ++NG  ++A  +F  M +   +P+  T  S+L    ++ + +   +VH
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            H ++ G + D  + S  +  Y +C ++++++ +  ++  +N    NA+   +    C  
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL L+  +       + +TF  +L A      LE  K +H  A+ A    D+ V +A++
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALV 477

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY KCG    AK+ F  +   ++  W  M+ G AQHGC HE  +LF +M + G+ PD  
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDAT 537

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           TY+++L++C   G +   +   S   +  GL+  L     +V +  + G ++ A+   D 
Sbjct: 538 TYVSILSACASTGALEWVKEVHSHAVNA-GLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596

Query: 641 MPIPPDAHIWQSLLSACTIYGN-ID-LGLLAGSKLLELQPDNESTYVLLS 688
           M +  D + W  ++     +G  +D L L    KL   +P+  S   +LS
Sbjct: 597 M-LERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLS 645



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 244/500 (48%), Gaps = 23/500 (4%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           +A  ++  +R    Q NE T +++L +      L+ GK+I A   + GF   V +  AL+
Sbjct: 13  DAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALV 72

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +MY KCG ++DA+ IFD ++ ++ +SW  MI G +  G   +A   F  M     IPN Y
Sbjct: 73  NMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSY 132

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  SIL A +++ +L+   +VHSH + +G  LD  + + L+  Y K  ++++++ V   +
Sbjct: 133 TYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM 192

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGSTFSIVLKACAAMTD--LE 495
            +++      +   L       EA  L+  +  G C   N +T+  +L A A  +   LE
Sbjct: 193 VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLP-NLTTYLSILNASAITSTGALE 251

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
             K +H  A KA +  D+ V +A+I MY KCG+I+DA+  F  +C   +  WNAM+ G A
Sbjct: 252 WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLA 311

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG---LVREARTYLSCMSDLHGLI 612
           Q+GC HE   +F KM + G  PD  TYL++L +    G    V+E   +   +    GL+
Sbjct: 312 QNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV----GLV 367

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY--GNIDLGLLAG 670
             L   +  V +  R G ++ A++  D++ +  +   W +++        G   L L   
Sbjct: 368 SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV-RNVTTWNAMIGGVAQQKCGREALSLFLQ 426

Query: 671 SKLLELQPDNES-TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
            +     PD  +   +L +N+   A  W       KE+    +  + G   + VG    H
Sbjct: 427 MRREGFFPDATTFVNILSANVGEEALEW------VKEVHSYAI--DAGLVDLRVGNALVH 478

Query: 730 FYAGDSSHSQSKEIYKELIK 749
            YA   +   +K+++ ++++
Sbjct: 479 MYAKCGNTMYAKQVFDDMVE 498



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 191/410 (46%), Gaps = 24/410 (5%)

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI GY+E G+   A+ ++  M      PN  T  SIL+A  +  SLK   ++H+HII+SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           F  D  + + L+  Y KC ++++++ +  ++ ++N +    +   L +     EA   + 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       N  T+  +L A A+   LE  K +H  A+ A    D+ V +A++ MY K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL- 586
           +I+DA+  F  +    +  W  M+ G AQHG   E  +LF +M + G  P+  TYL++L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 587 ----TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
               TS      V+E   +    +   G I  L     ++ +  + G ++ A++  D M 
Sbjct: 241 ASAITSTGALEWVKEVHKH----AGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM- 295

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ-----PDNESTYVLLSNLYASAGMW 697
              D   W +++      G    G  A +  L++Q     PD+ +TY+ L N + S G W
Sbjct: 296 CDRDVISWNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDS-TTYLSLLNTHVSTGAW 351

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             V ++ K   E  L  +     + VG    H Y    S   ++ I+ +L
Sbjct: 352 EWVKEVHKHAVEVGLVSD-----LRVGSAFVHMYIRCGSIDDAQLIFDKL 396


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/762 (33%), Positives = 418/762 (54%), Gaps = 20/762 (2%)

Query: 6   LIKNGHHL--DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQS 62
           L+   H L  D +LST +I+ ++       + R +FD  + +D+  YNAL+SG +R    
Sbjct: 117 LVSASHKLRNDVVLSTRIIAMYSACGSPSDS-RGVFDAAKEKDLFLYNALLSGYSRNALF 175

Query: 63  GPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
             A+ LF + L    L PD FT   + KAC  + + E+   VH + LK G  S  ++ + 
Sbjct: 176 RDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNA 235

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM---RSLGL 175
            I  Y K G + SA   F    + + V++ +++     NG F +   VF  +      GL
Sbjct: 236 LIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGL 295

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +  ++  V+    A  +V+ G  +HG   K+G    V   +NN+++++Y +CG   +A
Sbjct: 296 VPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVT--VNNSLVDMYSKCGYLGEA 353

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDL----RFNDFQINEYTMINLLSSVGG 288
             +FD     +VVSW+  I       +  G+F+ L    R    ++NE T++N+L +  G
Sbjct: 354 RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSG 413

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
           E  L + K+I  + ++ GF++   + NA ++ Y KC  ++ A  +F  +  K   SWN++
Sbjct: 414 EHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNAL 473

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I  +++NGF  ++LD+F  M++  + P+ +T+ S+L A +  K L+   ++H  ++++G 
Sbjct: 474 IGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGL 533

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            LD+ +   L++ Y +C+++   K +  +++ K+ V  N + +         EAL+ +R 
Sbjct: 534 ELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQ 593

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     +      + VL AC+ ++ L  GK +H  ALKA   +D FV  A+IDMY KCG 
Sbjct: 594 MLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGC 653

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E ++  F ++     A WN ++ GY  HG   +   LF  M   G +PD  T+L VL +
Sbjct: 654 MEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIA 713

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGLV E   YL  M +L+G+ P+LEHYAC+VD+LGR G L  A   +++MP  PD+ 
Sbjct: 714 CNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSG 773

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW SLLS+C  YG++++G     KLLEL+P+    YVLLSNLYA  G W++V K+R+ MK
Sbjct: 774 IWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMK 833

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           E  L K+ G SWI +GG  + F   D S S+SK+I +  IKL
Sbjct: 834 ENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKL 875



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 176/387 (45%), Gaps = 15/387 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+    ++G   D +++   ++ + K +    A R     + + + ++NALI   A+  
Sbjct: 422 EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNG 481

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
             G +L LF  +   G+ PD FT  SL+ AC  L+     + +HG  L+ G     ++  
Sbjct: 482 FPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGI 541

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y +   ++  ++ F    +   V +  M+ G+  N    ++ + F +M S G++ 
Sbjct: 542 SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            E ++T VLGA   V   + G+++H F +K          +  A++++Y +CG    +  
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDA--FVTCALIDMYAKCGCMEQSQN 659

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E D   W+  IA       G++A  LF+ ++    + + +T + +L +     +
Sbjct: 660 IFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGL 719

Query: 292 LRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G K +       G    +     ++ M G+ GQ+ +A  + + +  + DS  W+S++
Sbjct: 720 VTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLL 779

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPN 376
           +     G      ++   +LE  L PN
Sbjct: 780 SSCRNYGDLEIGEEVSKKLLE--LEPN 804



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 4/192 (2%)

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIE 530
           S  +++     I+L+AC    ++  G+ +H L   + +   D+ + + +I MY  CG+  
Sbjct: 86  SSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPS 145

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK-MSKFGVKPDEITYLAVLTSC 589
           D++  F       L  +NA++ GY+++  + +  +LF + +S   + PD  T   V  +C
Sbjct: 146 DSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKAC 205

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
                V       +      G        A ++ + G+ G +E A    + M    +   
Sbjct: 206 AGVADVELGEAVHALALKAGGFSDAFVGNA-LIAMYGKCGFVESAVKVFETMR-NRNLVS 263

Query: 650 WQSLLSACTIYG 661
           W S++ AC+  G
Sbjct: 264 WNSVMYACSENG 275


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 420/763 (55%), Gaps = 17/763 (2%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q+++  +K  ++LD + L T  +  + K   F  A +       R I T+NA+I      
Sbjct: 67  QLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSA 126

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   A++L+  +R  G+  DAFTF  ++KACG+ +E  +   +HGV +K G+   V++ 
Sbjct: 127 GRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVC 186

Query: 117 SGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +  I  YAK G++  A + F   L    D V++ +++  +V  GE  ++  +F  M+ +G
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG 246

Query: 175 LELNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           +E N ++  + L    G +F +K G  IH   +K    + V  +++NA++ +Y  CGQ  
Sbjct: 247 VESNTYTFVSALQACEGPTF-IKIGRGIHAVILKSNHFTDV--YVSNALIAMYANCGQME 303

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA ++F  +   D VSW+  ++         +A   F+D++ +  + ++ +++N++++ G
Sbjct: 304 DAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASG 363

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L AG ++ A+  K G    + IGN+LI MYGKC  V    S F+Y+  KD +SW +
Sbjct: 364 RSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTT 423

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +IAGY++N     AL++   +    +  +   + SIL A S  KS K   ++H +++K G
Sbjct: 424 IIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGG 483

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            L D  + + ++  YG+   ++ ++ V   I+ K+ V   ++ +  V+     EALEL+ 
Sbjct: 484 -LADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFN 542

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           ++  +  E +  T   VL A AA++ L++GK IH   ++  +  +  + ++++DMY +CG
Sbjct: 543 SLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCG 602

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           T+E+A+  F  + +  L  W +M+     HGC  +  +LF+KM+   V PD IT+LA+L 
Sbjct: 603 TMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLY 662

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H+GLV E + +   M + + L P  EHYAC+VDLL R   LE A   +  MPI P A
Sbjct: 663 ACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSA 722

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W +LL AC I+ N DLG +A  KLL+L  +N   YVL+SN +A+ G WNDV ++R  M
Sbjct: 723 EVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIM 782

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K   L K+PG SWI V    H F A D SH Q   IY +L + 
Sbjct: 783 KGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQF 825



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 16/223 (7%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKAR-YDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +S  L+ CA+   L QG+ +H   LK + Y   +F+++  + MY KCG+  DA + F K+
Sbjct: 49  YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM 108

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
              ++  WNAM+      G Y E   L+ +M   GV  D  T+  VL +C   G  +E R
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC---GAFKERR 165

Query: 600 TYLSCMSDLHGLIPQLEH----YAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQS 652
             L C  ++HG+  +  +    + C  ++ +  + G L GA++  D   +  D  + W S
Sbjct: 166 --LGC--EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNS 221

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           ++SA    G     L    ++ E+  ++ +TY  +S L A  G
Sbjct: 222 IISAHVGEGESLEALSLFRRMQEVGVES-NTYTFVSALQACEG 263


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/618 (36%), Positives = 348/618 (56%), Gaps = 12/618 (1%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGF 201
           V +   + GYV NG ++K+  ++ +M+  G+  ++    +V+   G+  D++ G ++H  
Sbjct: 86  VVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHED 145

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---V 258
            +  GF S V   +  A+ ++Y +CG   +A ++FD + + DVVSW+  IA         
Sbjct: 146 IIARGFESDVI--VGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  LF +++ N  + N  T+++++        L  GKQI  +  + G    V + N L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +MY KCG VN A  +F+ +  +D  SWN++I GYS N   ++AL  F  M    + PN  
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           TM S+L A ++  +L+Q  Q+H + I+SGF  +D + + L+  Y KC  +N + ++   +
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV--LKACAAMTDLEQ 496
            KKN V  NA+ S         EAL L+  I    + +   +F+IV  L ACA    LEQ
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALF--IEMQAQGIKPDSFAIVSVLPACAHFLALEQ 441

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           GK IH   +++ ++ ++ V + ++D+Y KCG +  A++ F ++    +  W  M++ Y  
Sbjct: 442 GKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGI 501

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           HG   +   LF+KM + G K D I + A+LT+C HAGLV +   Y  CM   +GL P+LE
Sbjct: 502 HGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLE 561

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HYAC+VDLLGR G L+ A   I  M + PDA++W +LL AC I+ NI+LG  A   L EL
Sbjct: 562 HYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFEL 621

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
            PDN   YVLLSN+YA A  W DV KLRK MKEK + K+PG S + V      F  GD +
Sbjct: 622 DPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRT 681

Query: 737 HSQSKEIYKELIKLYEHM 754
           H QS++IY  L  LYE M
Sbjct: 682 HPQSEQIYAMLEILYEQM 699



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 277/538 (51%), Gaps = 21/538 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL+L+ +++  G+ PD   F S++KACGS   LQ    VH   +  GF S V + +    
Sbjct: 104 ALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALAS 163

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y K G + +A   F      D V++ A++ GY  NG+  ++  +F EM+  G++ N  +
Sbjct: 164 MYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSST 223

Query: 182 LTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L +V+        +++G+QIH + ++ G  S V   + N ++N+Y +CG    A K+F+ 
Sbjct: 224 LVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVL--VVNGLVNMYAKCGNVNTAHKLFER 281

Query: 239 ITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   DV SW+  I          EA   F  ++    + N  TM+++L +      L  G
Sbjct: 282 MPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQG 341

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI  +  + GF     +GNAL++MY KCG VN A  +F+ +  K+ V+WN++I+GYS++
Sbjct: 342 QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQH 401

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  ++AL +F  M    + P+ + + S+L A ++  +L+Q  Q+H + I+SGF  +  + 
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA-SCHAE-ALELYRTIWGSC 473
           + L+  Y KC  +N ++++   + +++ V    +  +L Y    H E AL L+  +  + 
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTM--ILAYGIHGHGEDALALFSKMQETG 519

Query: 474 REVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIE 530
            +++   F+ +L AC+    ++QG +   C  +K+ Y     +E  + ++D+  + G ++
Sbjct: 520 TKLDHIAFTAILTACSHAGLVDQGLQYFQC--MKSDYGLAPKLEHYACLVDLLGRAGHLD 577

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +A    + +  +  A     ++G  +  C  E+     K   F + PD   Y  +L++
Sbjct: 578 EANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAK-HLFELDPDNAGYYVLLSN 634



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 234/449 (52%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +I  G   D I+ T L S +TK      A +       RD++++NA+I+G ++  
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   AL LF  ++  G++P++ T  S++  C    +L++ + +H   ++ G  S V +V+
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  YAK G + +A   F      D  ++ A++ GY  N +  ++   F  M+  G++ 
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++ +VL A    F +++G+QIHG+ ++ GF S   + + NA++N+Y +CG    A K
Sbjct: 321 NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN--DVVGNALVNMYAKCGNVNSAYK 378

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + + +VV+W+  I+         EA  LF +++    + + + ++++L +      
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA 438

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQI  +  + GF   V +G  L+ +Y KCG VN A+ +F+ +  +D VSW +MI  
Sbjct: 439 LEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILA 498

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    AL +F  M E     +     +IL A S++  + Q +Q +   +KS + L 
Sbjct: 499 YGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDYGLA 557

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
             +   +CL+   G+   L+E+  ++  +
Sbjct: 558 PKLEHYACLVDLLGRAGHLDEANGIIKNM 586



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 185/365 (50%), Gaps = 19/365 (5%)

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           I  ++V W   I GY +NGF+N+AL ++  M    + P+     S+++A  +   L+   
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           +VH  II  GF  D  + + L + Y KC +L  +++V   + K++ V  NA+ +      
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNG 200

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              EAL L+  +  +  + N ST   V+  CA +  LEQGK IHC A+++  + D+ V +
Sbjct: 201 QPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVN 260

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            +++MY KCG +  A + F ++    +A WNA++ GY+ +  +HE    FN+M   G+KP
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLL 631
           + IT ++VL +C H   + + +        +HG   +    +       +V++  + G +
Sbjct: 321 NSITMVSVLPACAHLFALEQGQ-------QIHGYAIRSGFESNDVVGNALVNMYAKCGNV 373

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSN 689
             A    ++MP   +   W +++S  + +G+    L L    +   ++PD   ++ ++S 
Sbjct: 374 NSAYKLFERMP-KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPD---SFAIVSV 429

Query: 690 LYASA 694
           L A A
Sbjct: 430 LPACA 434



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 185/362 (51%), Gaps = 13/362 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   I++G   D ++   L++ + K  +   A +       RD+ ++NA+I G +   
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNS 301

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   AL  F+R++ +G++P++ T  S++ AC    +L++ + +HG  ++ GF S   + +
Sbjct: 302 QHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN 361

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G + SA   F      + VA+ A++ GY  +G   ++  +F+EM++ G++ 
Sbjct: 362 ALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKP 421

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F++ +VL A      +++G+QIHG+ ++ GF S V   +   ++++Y +CG    A K
Sbjct: 422 DSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVV--VGTGLVDIYAKCGNVNTAQK 479

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + E DVVSW+  I A      G +A  LF  ++    +++      +L++     +
Sbjct: 480 LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGL 539

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G Q  Q      G    +     L+ + G+ G +++A  I   +  + D+  W +++
Sbjct: 540 VDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALL 599

Query: 350 AG 351
             
Sbjct: 600 GA 601


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/753 (31%), Positives = 408/753 (54%), Gaps = 11/753 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +  G     I+   LI  ++K      A R   +   RD +++ A++SG A+  
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL L+ ++   G+ P  +  SS++ +C   +   +  ++H    K GF S +++ +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y + G    AE  F D    D V +  ++ G+   G  + + E+F EM+  GL  
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +++++L A     D+++G Q+H +  K G  S     +  ++++LYV+CG    A+ 
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI--MEGSLLDLYVKCGDVETALV 300

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     +VV W+  + A     D  ++F LF  ++    + N++T   +L +    R 
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI +   K GF   + +   LI MY K G +  AR + + L  KD VSW SMIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++     AL  F  M +  + P+   +AS +   +   +++Q +Q+H+ I  SG+  D
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y +C  + E+     E++ K+ +  N L S    +  H EAL+++  +  
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + N  TF   L A A + +++QGK IH   +K  +  +  V +A+I +Y KCG+ ED
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++   +   WN ++   +QHG   E  +LF++M K G+KP+++T++ VL +C H
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E  +Y   MSD +G+ P+ +HYAC++D+ GR G L+ AK  I++MPI  DA +W+
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NI++G  A   LLEL+P + ++YVLLSN YA    W +  ++RK M+++ 
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + KEPG SWI V    H F+ GD  H  +++IY
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 813



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 6/372 (1%)

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
           G  R  +   +I A     G  +   +GN LI +Y K G V  AR +F+ L  +D+VSW 
Sbjct: 53  GNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV 112

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M++GY++NG   +AL ++  M    ++P  Y ++S+L + + ++   Q   +H+   K 
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC-HAE-ALE 464
           GF  +  + + +IT Y +C +   ++RV  ++  ++ V  N L S   +A C H E ALE
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG--HAQCGHGEHALE 230

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           ++  +  S    +  T S +L ACA++ DL++G  +H    KA    D  +E +++D+Y 
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYV 290

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG +E A   F    R ++  WN M++ + Q     +   LF +M   G++P++ TY  
Sbjct: 291 KCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPC 350

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C     + +    +  +S   G    +     ++D+  + G LE A+  ++ +   
Sbjct: 351 ILRTCTCTREI-DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-E 408

Query: 645 PDAHIWQSLLSA 656
            D   W S+++ 
Sbjct: 409 KDVVSWTSMIAG 420


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/763 (31%), Positives = 417/763 (54%), Gaps = 11/763 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +  G   D ++   LI  + K     +A +   +  +RD +++ A++SG A+  
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSL-QENEIVHGVCLKLGFSSRVYLVS 117
               A +L+ ++ +  + P  +  SS++ AC  G L  +  ++H    K  F S  ++ +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y   G    AE  F D L  D V +  ++ G+   G  + + ++F EM+  GL  
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A     D+++G+Q+H + +K G           ++++LYV+CG    A  
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT--EGSLLDLYVKCGDIETAHD 301

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     +VV W+  + A     D  ++F +F  ++      N++T   +L +      
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI +   K GF   + +   LI MY K   ++ AR I + L  +D VSW SMIAG
Sbjct: 362 IELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++ F  +AL  F  M +  + P+   +AS   A +  K+++Q +Q+H+ +  SG+  D
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y +C    E+  +  EID K+ +  N L S    +  + +AL ++  +  
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQ 541

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  + N  TF   + A A + D++QGK +H  A+K  +  +  V +A+I +Y KCG+IED
Sbjct: 542 AGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIED 601

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++   +   WN ++   +QHG   E  +LF++M + G+KP+++T++ VL +C H
Sbjct: 602 AKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSH 661

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E  +Y   MS+++GL P  +HYAC+VD+LGR G L+ A+  +D+MPI  +A IW+
Sbjct: 662 VGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWR 721

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NI++G LA   LLEL+P + ++YVLLSN YA  G W +  ++RK MK++ 
Sbjct: 722 TLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRG 781

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + KEPG SWI V    H F+ GD  H  S +IYK L +L + +
Sbjct: 782 IRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRL 824



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 94/203 (46%)

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           +++H+  +  G   D  + + LI  Y K   + ++++V  E+  ++ V   A+ S     
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EA  LY  +  +         S VL AC       QG+ IH    K  +  + FV 
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+I +Y   G+ + A+R F  +       +N ++ G+AQ G       +F++M   G++
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242

Query: 577 PDEITYLAVLTSCCHAGLVREAR 599
           PD +T  ++L +C   G +++ +
Sbjct: 243 PDCVTVASLLAACASVGDLQKGK 265


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 252/753 (33%), Positives = 393/753 (52%), Gaps = 11/753 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++ NG   + IL T L+  +     F  A    +  +      +N +I G     
Sbjct: 67  QAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMG 126

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q   AL  + ++   G  PD +TF  ++KACG L       +VH     +GF   V++ S
Sbjct: 127 QFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGS 186

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+++G I  A   F      D V +  M+ GYV NG++D +  VF+EMR      
Sbjct: 187 SLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNP 246

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL    +   +  G Q+HG  V  G    + + + N ++ +Y +CG   DA +
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGL--EMDSPVANTLLAMYAKCGHLFDARR 304

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + + D+V+W+  I+         EA  LF ++     + +  T  + L  +     
Sbjct: 305 LFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGAT 364

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR GK+I  +  + G    V + +ALI +Y KC  V  AR IFD     D V   +MI+G
Sbjct: 365 LRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISG 424

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  NG  N AL++F  +L+  +  N  T+AS+L A +   +L    ++H HI+K+G    
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S ++  Y KC  L+ + +    I  K+AV  N++ +         EA++L+R +  
Sbjct: 485 CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  + +  + S  L ACA +  L  GK IH   ++  +  D+F ESA+IDMY KCG ++ 
Sbjct: 545 AGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A R F  +   +   WN+++  Y  HG   +  NLF+ M   G++PD +T+LA++++C H
Sbjct: 605 ACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGH 664

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AG V E   Y  CM++  G++ ++EHYAC+VDL GR G L  A   I+ MP  PDA +W 
Sbjct: 665 AGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 724

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC ++GN++L  +A   L +L P N   YVLLSN++A+AG W  V K+R  MKE+ 
Sbjct: 725 TLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERG 784

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + K PG SWI V   TH F A D SH QS +IY
Sbjct: 785 VQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 131/299 (43%), Gaps = 17/299 (5%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           SL P    + SIL+  ++   L Q  Q H+ ++ +G   +  + + L+  Y  C A  ++
Sbjct: 44  SLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           K +  ++    +   N +            AL  Y  + G     +  TF  V+KAC  +
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL 160

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             +  G+ +H       ++ D+FV S++I  Y + G I DA+  F ++       WN M+
Sbjct: 161 NSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVML 220

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GY ++G +   + +F +M +    P+ +T+  VL+ C        +   ++  S LHGL
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA-------SEIMINFGSQLHGL 273

Query: 612 I--PQLEHYACIVDLL----GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           +    LE  + + + L     + G L  A+   D MP   D   W  ++S     G +D
Sbjct: 274 VVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTWNGMISGYVQNGFMD 331



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 5/217 (2%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L+ C   + L QG+  H   L      +  + + ++ MY  CG   DAK  F ++    
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
              WN M+ G+   G +      + KM   G  PD+ T+  V+ +C     V   R    
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            +    G    +   + ++      G +  A+   D+MP   D  +W  +L+     G+ 
Sbjct: 172 KIQ-FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-SKDGVLWNVMLNGYVKNGDW 229

Query: 664 D--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
           D   G+    +  E  P N  T+  + ++ AS  M N
Sbjct: 230 DNATGVFMEMRRTETNP-NSVTFACVLSVCASEIMIN 265


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/685 (35%), Positives = 389/685 (56%), Gaps = 13/685 (1%)

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G++ + F F S++KAC   ++    + VHG+ +  GF S  ++ +  +  YAK G    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF-- 190
              F    D   V++ A+   YV +    ++  +F +M   G+  NEFSL++++      
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 191 -DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
            D  +G +IHG+ +K+G+ S   +   NA++++Y + G   DA  +FDEI +PD+VSW+ 
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFS--ANALVDMYAKVGILEDASSVFDEIAKPDIVSWNA 182

Query: 250 RIAAACDGVE----AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
            I A C   E    A  L +++  +    N +T+ + L +  G  +   G+Q+ +   K+
Sbjct: 183 -IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKM 241

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                  +G  LI MY KC  ++DAR +F  +  +D ++WN++I+G+S+N    +A  +F
Sbjct: 242 DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLF 301

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M    +  N  T++++L++++  ++     Q+H+  +KSGF  D+ +++ LI TYGKC
Sbjct: 302 PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             + ++ RV  E    + V   +L +         EAL LY  +     + +    S +L
Sbjct: 362 GHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLL 421

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            ACA+++  EQGK +H   LK  +  DIF  +++++MY KCG+IEDA  AF +I    + 
Sbjct: 422 NACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W+AM+ G AQHG   E   LF +M K GV P+ IT ++VL +C HAGLV EA+ Y + M
Sbjct: 482 SWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSM 541

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
             L G+ P  EHYAC++DLLGR G LE A   +++MP   +A +W +LL A  I+ NIDL
Sbjct: 542 KILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDL 601

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G  A   LL L+P+   T+VLL+N+YAS GMW+ V ++R+ MK+  + KEPG SW+ V  
Sbjct: 602 GEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKD 661

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKL 750
             + F  GD SHS+S EIY +L +L
Sbjct: 662 KVYTFIVGDRSHSRSTEIYAKLDEL 686



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 260/523 (49%), Gaps = 11/523 (2%)

Query: 170 MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M  LG++ NEF+  +VL A   + D+  G+Q+HG  V  GF S     + N+++ LY +C
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSD--EFVANSLVILYAKC 58

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLL 283
           G   DA  +FD I +  VVSW+   +         EA  LF D+  +  + NE+++ +++
Sbjct: 59  GGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMI 118

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           +   G      G++I  +  K+G+       NAL+ MY K G + DA S+FD +   D V
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SWN++IAG   + + ++AL++   M +  + PN +T++S L+A +     +   Q+HS +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           IK     D  +   LI  Y KCN++++++ V   + +++ +  NA+ S         EA 
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +       N +T S VLK+ AA+      + IH L+LK+ ++ D +V +++ID Y
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY 358

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG +EDA R F +     L  + +++  YAQ G   E   L+ +M   G+KPD     
Sbjct: 359 GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCS 418

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L +C       + +     +    G +  +     +V++  + G +E A     ++P+
Sbjct: 419 SLLNACASLSAYEQGKQVHVHILKF-GFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ-PDNESTYV 685
                 W +++     +G     L    ++L++  P N  T V
Sbjct: 478 RGIVS-WSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLV 519



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 247/498 (49%), Gaps = 13/498 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++ +++  G   D  ++ +L+  + K   F  A R LFD   +R ++++NAL S     
Sbjct: 31  QVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA-RSLFDAIPDRSVVSWNALFSCYVHS 89

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLV 116
              G A+ LF  +   G+RP+ F+ SS++  C  L+++     +HG  +KLG+ S  +  
Sbjct: 90  DMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSA 149

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK G +  A   F +    D V++ A++ G V +    ++ E+  EM   G+ 
Sbjct: 150 NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMC 209

Query: 177 LNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N F+L++ L   A   ++E G Q+H   +K+    G  + L   ++++Y +C    DA 
Sbjct: 210 PNMFTLSSALKACAGMALRELGRQLHSSLIKMDM--GSDSFLGVGLIDMYSKCNSMDDAR 267

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  + E D+++W+  I+      +  EA  LF  +       N+ T+  +L S+   +
Sbjct: 268 LVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQ 327

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
                +QI A   K GF     + N+LI  YGKCG V DA  +F+     D V + S++ 
Sbjct: 328 ANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVT 387

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y+++G   +AL ++  M +  + P+ +  +S+L A ++  + +Q  QVH HI+K GF+ 
Sbjct: 388 AYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMS 447

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D    + L+  Y KC ++ ++    S I  +  V  +A+   L       EAL+L++ + 
Sbjct: 448 DIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQML 507

Query: 471 GSCREVNGSTFSIVLKAC 488
                 N  T   VL AC
Sbjct: 508 KVGVPPNHITLVSVLCAC 525


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/680 (35%), Positives = 385/680 (56%), Gaps = 13/680 (1%)

Query: 92  GSLQENEIVHGVCLKLGFSSR--VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
           GS++E + VHG+ LK  F  +  + L +     Y+K  E  +A   F +    +  ++T 
Sbjct: 78  GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 137

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVG 206
           M+ G   +G F    + F EM + G+  ++F+ +A++ +   +     G+ +H   V  G
Sbjct: 138 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 197

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGL 263
           F + +   ++ +++N+Y + G   D+  +F+ +TE + VSW+  I+        +EAF L
Sbjct: 198 FATHI--FVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDL 255

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           F  ++      N YT++++  +VG    +  GK++Q    ++G    V +G ALI MY K
Sbjct: 256 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 315

Query: 324 CGQVNDARSIFDYLIFKDSVS--WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
           CG ++DARS+FD       V+  WN+MI+GYS++G   +AL+++  M +  +  + YT  
Sbjct: 316 CGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYC 375

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGF-LLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           S+  A++ SKSL+    VH  ++K G  L+  S+ + +   Y KC  L + ++V   +++
Sbjct: 376 SVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEE 435

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           ++ V    L +    +S   EAL  +  +       N  TFS VL +CA++  LE G+ +
Sbjct: 436 RDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQV 495

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H L  KA  D +  +ESA+IDMY KCG+I +A + F KI    +  W A++ GYAQHG  
Sbjct: 496 HGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLV 555

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            +   LF +M   G+K + +T L VL +C H G+V E   Y   M D +G++P++EHYAC
Sbjct: 556 EDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYAC 615

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           I+DLLGRVG L+ A   I +MP+ P+  +WQ+LL  C ++GN++LG +A  K+L ++P+ 
Sbjct: 616 IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEY 675

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
            +TYVLLSN Y   G + D   LR  MK++ + KEPGYSWI V G  H FY+GD  H Q 
Sbjct: 676 SATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQK 735

Query: 741 KEIYKELIKLYEHMVATAKL 760
           KEIY +L +L E + A   +
Sbjct: 736 KEIYVKLEELREKIKAMVPM 755



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 268/554 (48%), Gaps = 28/554 (5%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           ++K ++FR A     +   R++ ++  +I G           K F  +   G+ PD F +
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170

Query: 85  SSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
           S+++++C    SL+  ++VH   +  GF++ +++ +  +  YAK G I  +   F    +
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV---LGASFDVKEGEQI 198
            + V++ AM+ G   NG   ++ ++FV M++     N ++L +V   +G   DV  G+++
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE------ITEPDVVSWSERIA 252
                ++G    V   +  A++++Y +CG   DA  +FD       +  P    W+  I+
Sbjct: 291 QNCASELGIEGNVL--VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP----WNAMIS 344

Query: 253 ----AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF- 307
               + C   EA  L+  +  N    + YT  ++ +++   + L+ G+ +     K G  
Sbjct: 345 GYSQSGCSQ-EALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 403

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           + VVS+ NA+   Y KCG + D R +FD +  +D VSW +++  YS++    +AL  FC 
Sbjct: 404 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCL 463

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M E    PN +T +S+L + ++   L+   QVH  + K+G   +  + S LI  Y KC +
Sbjct: 464 MREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGS 523

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + E+ +V  +I   + V   A+ S         +AL+L+R +  S  + N  T   VL A
Sbjct: 524 ITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFA 583

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRD-SL 544
           C+    +E+G   +   ++  Y     +E  + +ID+  + G ++DA    RK+  + + 
Sbjct: 584 CSHGGMVEEG-LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE 642

Query: 545 AGWNAMMMGYAQHG 558
             W  ++ G   HG
Sbjct: 643 MVWQTLLGGCRVHG 656



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 255/558 (45%), Gaps = 59/558 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ ++  G      +ST+L++ + K      ++         + +++NA+ISG      
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 248

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A  LF R++     P+ +T  S+ KA G L +  +   V     +LG    V + + 
Sbjct: 249 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 308

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLD------NVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            I+ Y+K G +  A    R   D +      N  + AM+ GY  +G   ++ E++V+M  
Sbjct: 309 LIDMYSKCGSLHDA----RSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 364

Query: 173 LGLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  + ++  +V   + AS  ++ G  +HG  +K G L  +   +NNAI + Y +CG  
Sbjct: 365 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCG-LDLMVVSVNNAIADAYSKCGFL 423

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            D  K+FD + E D+VSW+  + A      G EA   F  +R   F  N++T  ++L S 
Sbjct: 424 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 483

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G+Q+     K G      I +ALI MY KCG + +A  +FD +   D VSW 
Sbjct: 484 ASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWT 543

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++I+GY+++G    AL +F  M    +  N  T+  +L A S+   +++ +  +   ++ 
Sbjct: 544 AIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQMED 602

Query: 407 GFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           G+ +   M   +C+I   G+   L+++     E  +K  +  N +               
Sbjct: 603 GYGVVPEMEHYACIIDLLGRVGRLDDAM----EFIRKMPMEPNEM--------------- 643

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           +++T+ G CR V+G+             +L +  A   L+++  Y     + S   + Y 
Sbjct: 644 VWQTLLGGCR-VHGN------------VELGEIAARKILSIRPEYSATYVLLS---NTYI 687

Query: 525 KCGTIEDAKRAFRKICRD 542
           + G+ ED   + R + +D
Sbjct: 688 ETGSYEDG-LSLRNVMKD 704



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 122/262 (46%), Gaps = 9/262 (3%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDK 440
           +L   +   S+++A  VH  ++KS F   D M+  +     Y KC+    +  V  E+ +
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 441 KNAVHINALASVLVYASCHA---EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +N   + +   ++V ++ H    +  + +  +  S    +   +S ++++C  +  LE G
Sbjct: 130 RN---VFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K +H   +   +   IFV +++++MY K G+IED+   F  +   +   WNAM+ G   +
Sbjct: 187 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G + E  +LF +M      P+  T ++V  +      V   +   +C S+L G+   +  
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL-GIEGNVLV 305

Query: 618 YACIVDLLGRVGLLEGAKMTID 639
              ++D+  + G L  A+   D
Sbjct: 306 GTALIDMYSKCGSLHDARSVFD 327



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARY-DQDIFVE-SAVIDMYCKCGTIEDAKRAFRKICR 541
           VL+ CA    + + KA+H L LK+ + D+D+ V  +    +Y KC     A   F ++ +
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            ++  W  M++G  +HG + +    F +M   G+ PD+  Y A++ SC     + E    
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSL-ELGKM 188

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           +     + G    +     ++++  ++G +E +    + M    +   W +++S CT  G
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM-TEHNQVSWNAMISGCTSNG 247



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ LL K G   +  + + LI  + K      A +      N DI+++ A+ISG A+  
Sbjct: 494 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 553

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL+LF R+   G++ +A T   ++ AC
Sbjct: 554 LVEDALQLFRRMELSGIKANAVTLLCVLFAC 584


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 238/676 (35%), Positives = 384/676 (56%), Gaps = 13/676 (1%)

Query: 92  GSLQENEIVHGVCLKLGFSSR--VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
           GS++E + VHG+ LK  F  +  + L +     Y+K  E  +A   F +    +  ++T 
Sbjct: 132 GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 191

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVG 206
           M+ G   +G F    + F EM + G+  ++F+ +A++ +   +     G+ +H   V  G
Sbjct: 192 MIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRG 251

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGL 263
           F + +   ++ +++N+Y + G   D+  +F+ +TE + VSW+  I+        +EAF L
Sbjct: 252 FATHI--FVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDL 309

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           F  ++      N YT++++  +VG    +  GK++Q    ++G    V +G ALI MY K
Sbjct: 310 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 369

Query: 324 CGQVNDARSIFDYLIFKDSVS--WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
           CG ++DARS+FD       V+  WN+MI+GYS++G   +AL+++  M +  +  + YT  
Sbjct: 370 CGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYC 429

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGF-LLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           S+  A++ SKSL+    VH  ++K G  L+  S+ + +   Y KC  L + ++V   +++
Sbjct: 430 SVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEE 489

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           ++ V    L +    +S   EAL  +  +       N  TFS VL +CA++  LE G+ +
Sbjct: 490 RDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQV 549

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H L  KA  D +  +ESA+IDMY KCG+I +A + F KI    +  W A++ GYAQHG  
Sbjct: 550 HGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLV 609

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            +   LF +M   G+K + +T L VL +C H G+V E   Y   M D +G++P++EHYAC
Sbjct: 610 EDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYAC 669

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           I+DLLGRVG L+ A   I +MP+ P+  +WQ+LL  C ++GN++LG +A  K+L ++P+ 
Sbjct: 670 IIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEY 729

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
            +TYVLLSN Y   G + D   LR  MK++ + KEPGYSWI V G  H FY+GD  H Q 
Sbjct: 730 SATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQK 789

Query: 741 KEIYKELIKLYEHMVA 756
           KEIY +L +L E + A
Sbjct: 790 KEIYVKLEELREKIKA 805



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 268/554 (48%), Gaps = 28/554 (5%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           ++K ++FR A     +   R++ ++  +I G           K F  +   G+ PD F +
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224

Query: 85  SSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
           S+++++C    SL+  ++VH   +  GF++ +++ +  +  YAK G I  +   F    +
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV---LGASFDVKEGEQI 198
            + V++ AM+ G   NG   ++ ++FV M++     N ++L +V   +G   DV  G+++
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE------ITEPDVVSWSERIA 252
                ++G    V   +  A++++Y +CG   DA  +FD       +  P    W+  I+
Sbjct: 345 QNCASELGIEGNVL--VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP----WNAMIS 398

Query: 253 ----AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF- 307
               + C   EA  L+  +  N    + YT  ++ +++   + L+ G+ +     K G  
Sbjct: 399 GYSQSGCSQ-EALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 457

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           + VVS+ NA+   Y KCG + D R +FD +  +D VSW +++  YS++    +AL  FC 
Sbjct: 458 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCL 517

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M E    PN +T +S+L + ++   L+   QVH  + K+G   +  + S LI  Y KC +
Sbjct: 518 MREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGS 577

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + E+ +V  +I   + V   A+ S         +AL+L+R +  S  + N  T   VL A
Sbjct: 578 ITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFA 637

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRD-SL 544
           C+    +E+G   +   ++  Y     +E  + +ID+  + G ++DA    RK+  + + 
Sbjct: 638 CSHGGMVEEG-LFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE 696

Query: 545 AGWNAMMMGYAQHG 558
             W  ++ G   HG
Sbjct: 697 MVWQTLLGGCRVHG 710



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 255/558 (45%), Gaps = 59/558 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ ++  G      +ST+L++ + K      ++         + +++NA+ISG      
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGL 302

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A  LF R++     P+ +T  S+ KA G L +  +   V     +LG    V + + 
Sbjct: 303 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 362

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLD------NVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            I+ Y+K G +  A    R   D +      N  + AM+ GY  +G   ++ E++V+M  
Sbjct: 363 LIDMYSKCGSLHDA----RSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 418

Query: 173 LGLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  + ++  +V   + AS  ++ G  +HG  +K G L  +   +NNAI + Y +CG  
Sbjct: 419 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCG-LDLMVVSVNNAIADAYSKCGFL 477

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            D  K+FD + E D+VSW+  + A      G EA   F  +R   F  N++T  ++L S 
Sbjct: 478 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 537

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G+Q+     K G      I +ALI MY KCG + +A  +FD +   D VSW 
Sbjct: 538 ASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWT 597

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++I+GY+++G    AL +F  M    +  N  T+  +L A S+   +++ +  +   ++ 
Sbjct: 598 AIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQMED 656

Query: 407 GFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           G+ +   M   +C+I   G+   L+++     E  +K  +  N +               
Sbjct: 657 GYGVVPEMEHYACIIDLLGRVGRLDDAM----EFIRKMPMEPNEM--------------- 697

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           +++T+ G CR V+G+             +L +  A   L+++  Y     + S   + Y 
Sbjct: 698 VWQTLLGGCR-VHGN------------VELGEIAARKILSIRPEYSATYVLLS---NTYI 741

Query: 525 KCGTIEDAKRAFRKICRD 542
           + G+ ED   + R + +D
Sbjct: 742 ETGSYEDG-LSLRNVMKD 758



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 130/283 (45%), Gaps = 10/283 (3%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSE 437
           +  +L   +   S+++A  VH  ++KS F   D M+  +     Y KC+    +  V  E
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180

Query: 438 IDKKNAVHINALASVLVYASCHA---EALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
           + ++N   + +   ++V ++ H    +  + +  +  S    +   +S ++++C  +  L
Sbjct: 181 MPQRN---VFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSL 237

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           E GK +H   +   +   IFV +++++MY K G+IED+   F  +   +   WNAM+ G 
Sbjct: 238 ELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 297

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             +G + E  +LF +M      P+  T ++V  +      V   +   +C S+L G+   
Sbjct: 298 TSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL-GIEGN 356

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLLSA 656
           +     ++D+  + G L  A+   D   I    +  W +++S 
Sbjct: 357 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISG 399



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARY-DQDIFVE-SAVIDMYCKCGTIEDAKRAFRKICR 541
           VL+ CA    + + KA+H L LK+ + D+D+ V  +    +Y KC     A   F ++ +
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            ++  W  M++G  +HG + +    F +M   G+ PD+  Y A++ SC     + E    
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSL-ELGKM 242

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           +     + G    +     ++++  ++G +E +    + M    +   W +++S CT  G
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT-EHNQVSWNAMISGCTSNG 301



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ LL K G   +  + + LI  + K      A +      N DI+++ A+ISG A+  
Sbjct: 548 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 607

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL+LF R+   G++ +A T   ++ AC
Sbjct: 608 LVEDALQLFRRMELSGIKANAVTLLCVLFAC 638


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/749 (33%), Positives = 417/749 (55%), Gaps = 41/749 (5%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD   NRD+I+++ALI+  +R      A  LF ++  +GL+P+ F+ +SL+K   S  E
Sbjct: 77  LFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGE 136

Query: 97  NEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC--LDLDNVAYTAMV 151
             +   +HG  ++ GF     + + +I  Y++ G +  A+  F +   L LD + + +++
Sbjct: 137 IGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSII 196

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGL----ELNEFSLTAVLGASFDVKEGEQIHGFGVKVGF 207
             Y+++G + +   +F +M S+G+    EL   S+    G+S + K G  +HG  +K G 
Sbjct: 197 AAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGL 256

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLF 264
            +    +L N+++  Y +CG    A ++F+ I+  DVVSW+  IAA     +G  A GLF
Sbjct: 257 EA---TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLF 313

Query: 265 KDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
           + +   +   Q N  T ++LLS+V G   LR G++I A  +++      SI N+LI+ Y 
Sbjct: 314 RRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYS 373

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
           KC +V  AR IF+ L+ +D +SWNSM+AGY +N    +  D+F  M+   + P+ +++  
Sbjct: 374 KCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTI 433

Query: 383 ILEAVSNSKS----LKQAMQVHSHIIK----SGFLLDDSMISCLITTYGKCNALNESKRV 434
           I  A S   S     ++  ++H +I++     G  L  S+ + ++  Y K N + +++++
Sbjct: 434 IFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSL--SVSNAILKMYAKFNRIADAEKI 491

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              +  +++   NA+       +   + L ++  I      ++  + SI+L +C  +  L
Sbjct: 492 FKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSL 551

Query: 495 EQGKAIHCLALKARYDQD-------IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           + GK  H +  K    QD       + + +A+I MY KCG+I+DA + F K+ R  +  W
Sbjct: 552 QLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSW 611

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            AM+ G A HG   E   LF +M   G+KP+++T+LA+L +C H GLV+E   Y   M +
Sbjct: 612 TAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYN 671

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTID-----QMPIPPDA-HIWQSLLSACTIYG 661
            +GL P +EHYAC++DL GR G  + AK  ++       P   D  ++W+ LL AC    
Sbjct: 672 DYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASK 731

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
            +DLG+ A +K+LEL+P++E+TY+LL+NLYAS+G+W D  K+RK M++K L KE G SWI
Sbjct: 732 QLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWI 791

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             G   H F AGD  H Q KEIY++L +L
Sbjct: 792 DTGNRRHVFVAGDVYHPQRKEIYEKLAQL 820



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 149/582 (25%), Positives = 279/582 (47%), Gaps = 33/582 (5%)

Query: 108 GFSS----RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
           GFSS    R    S F+ + ++   +  A+  F +  + D ++++A++  Y   G F ++
Sbjct: 46  GFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQA 105

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIM 220
             +F +M   GL+ N FSL ++L  S    E     Q+HG+ ++ GF  G+ + +  A +
Sbjct: 106 FGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGF--GLDSGIRAAWI 163

Query: 221 NLYVRCGQKLDAVKMFDEIT--EPDVVSWSERIAA----ACDGVEAFGLF-KDLRFNDFQ 273
            +Y RCG   DA ++FDE +    D++ W+  IAA     C  VE   LF K +      
Sbjct: 164 TMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGC-WVEVLRLFCKMVSVGVVA 222

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             E T  +++++ G     + G  +     K G +E  ++ N+L++ YGKCG +  A  +
Sbjct: 223 PTELTYASVVNACGSSGEEKYGAMVHGRIIKAG-LEATNLWNSLVTFYGKCGNLQHASQL 281

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSK 391
           F+ +  KD VSWN+MIA   + G    AL +F  ML  E  + PN  T  S+L AVS   
Sbjct: 282 FERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS 341

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L+   ++H+HI +    +D S+ + LIT Y KC  + +++ +   +  ++ +  N++ +
Sbjct: 342 ALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLA 401

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC----AAMTDLEQGKAIHCLALK- 506
                       ++++ +  S  E +  + +I+  A     + +    +GK IH   L+ 
Sbjct: 402 GYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR 461

Query: 507 -ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
                  + V +A++ MY K   I DA++ F+ +       WNAMM GY+++  + +V  
Sbjct: 462 ITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLM 521

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG--LIPQLEHYACI-- 621
           +F  + K G   D ++   +LTSC     ++  + + + ++ L      P  +    I  
Sbjct: 522 IFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINN 581

Query: 622 --VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
             + +  + G ++ A     +M    D   W ++++ C  +G
Sbjct: 582 ALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHHG 622



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 159/687 (23%), Positives = 282/687 (41%), Gaps = 103/687 (14%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY-- 74
           L  +L++ + K  + + A +       +D++++NA+I+   +  +   AL LF R+    
Sbjct: 261 LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVE 320

Query: 75  QGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
             ++P+  TF SL+ A   L        +H    +L       + +  I  Y+K  E+  
Sbjct: 321 PPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGK 380

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS-- 189
           A   F   L  D +++ +M+ GY  N +  +  ++F  M   G+E +  SLT +  A+  
Sbjct: 381 AREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR 440

Query: 190 -----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
                   + G++IHG+ ++     GV   ++NAI+ +Y +  +  DA K+F  +   D 
Sbjct: 441 DSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDS 500

Query: 245 VSWSERIAAACDGV-------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
            SW+    A  DG        +   +F D+    F ++  ++  LL+S G    L+ GKQ
Sbjct: 501 YSWN----AMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQ 556

Query: 298 IQAFCYKVGFME-------VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             A   K+   +       ++SI NALISMY KCG + DA  +F  +  KD  SW +MI 
Sbjct: 557 FHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMIT 616

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G + +G   +AL +F  M    + PN  T  ++L A +           H  +++ G   
Sbjct: 617 GCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACA-----------HGGLVQEGSYY 665

Query: 411 DDSM------------ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            DSM             +C+I  +G+    + +K ++                + ++   
Sbjct: 666 FDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVE-------------FGITLFKPY 712

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
           H + L L++ + G+C               +   DL    A   L L+   D+  ++  A
Sbjct: 713 HDDILNLWKVLLGACH-------------ASKQLDLGVEAATKILELEPE-DEATYILLA 758

Query: 519 VIDMYCKCGTIEDAKRAFRKICRD----SLAGWNAMMMGYAQH-----GCYH-EVSNLFN 568
             ++Y   G  EDA +  RK  RD       G + +  G  +H       YH +   ++ 
Sbjct: 759 --NLYASSGLWEDAIKV-RKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYE 815

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           K+++       + Y+ +     H     E    L C S         E  A    LL   
Sbjct: 816 KLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHS---------EKLAVSFGLLN-C 865

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           G+  G    +  + +  D H W    S
Sbjct: 866 GVGNGVIRVMKNLRVCEDCHSWMKFAS 892



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 172/360 (47%), Gaps = 23/360 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ + +    +D  ++ +LI+ ++K  +  +A         RDII++N++++G  +  
Sbjct: 348 EIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNE 407

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS-------LQENEIVHGVCLKLGFSSRV 113
           Q G    +F R+   G+ PD+ + + +  A           +  + +HG  L+      V
Sbjct: 408 QQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGV 467

Query: 114 YL--VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            L   +  ++ YAK   I  AE  F+   + D+ ++ AM+ GY  N +F+    +F+++ 
Sbjct: 468 SLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDIL 527

Query: 172 SLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNH------LNNAIMNL 222
             G  L+  SL+ +L   G    ++ G+Q H    K+ F    C H      +NNA++++
Sbjct: 528 KQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKL-FNGQDCPHQDSLLSINNALISM 586

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y +CG   DA ++F ++   DV SW+  I         VEA  LF+ ++ +  + N+ T 
Sbjct: 587 YSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTF 646

Query: 280 INLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + LL +     +++ G       Y   G    +     +I ++G+ GQ + A+S+ ++ I
Sbjct: 647 LALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGI 706



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 158/337 (46%), Gaps = 22/337 (6%)

Query: 374 IPNGYTMASILEAVSNSKSL-----KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +P    + SI   V++ + L      + ++  +H   S F+   S  S  + +  +   L
Sbjct: 12  VPPRPLLPSIKSNVTSFRFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERL 71

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             ++++      ++ +  +AL +        A+A  L++ + G   + NG + + +LK  
Sbjct: 72  KCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVS 131

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL--AG 546
            +  ++   + +H  +++  +  D  + +A I MY +CG +EDA+R F +    +L    
Sbjct: 132 CSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILL 191

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
           WN+++  Y  HGC+ EV  LF KM   G V P E+TY +V+ +C  +G  +         
Sbjct: 192 WNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYG------- 244

Query: 606 SDLHGLIPQ--LEH---YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           + +HG I +  LE    +  +V   G+ G L+ A    +++    D   W ++++A    
Sbjct: 245 AMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMIAANEQR 303

Query: 661 GNIDLGLLAGSKLLELQPDNESTYV-LLSNLYASAGM 696
           G  +  L    ++L+++P  +   V  LS L A +G+
Sbjct: 304 GEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGL 340


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 257/784 (32%), Positives = 430/784 (54%), Gaps = 38/784 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADF-RRAFRFLFDTQNRDIITYNALISGL 56
           QI+ L+ K  +  D   S  LIS +       D+ RRAF  ++    R++++ N++IS  
Sbjct: 197 QIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWP---RNLVSLNSMIS-- 251

Query: 57  ARFCQSGPALKLFD-------RLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCL---- 105
             +CQ G A+  FD        +   GL+P+ +TF SL+ A  SL  + +V    L    
Sbjct: 252 -VYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRV 310

Query: 106 -KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
            K GF   +Y+ S  +  +AK+G I  A+  F+     + V+   ++ G V     +++ 
Sbjct: 311 EKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAV 370

Query: 165 EVFVEMRSLGLELNEFSLTAVLGA--SFDV-----KEGEQIHGFGVKVGFLSGVCNHLNN 217
           E+F+EM+   +ELN  S   +L A   F V     ++G ++H F ++ G L+     + N
Sbjct: 371 ELFMEMKD-SVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIA-IGN 428

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQI 274
            ++N+Y +CG   DA  +F  +   D V+W+  I         +EA   F+++R  +   
Sbjct: 429 GLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYP 488

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + +TMI+ LSS      +  G+Q+     K+G    VS+ NAL+++YG+CG V + +  F
Sbjct: 489 SNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAF 548

Query: 335 DYLIFKDSVSWNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
             ++  D VSWNS+I   +++     +A++ F  M+     PN  T  +IL AVS+    
Sbjct: 549 SLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLH 608

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASV 452
           +   Q+H+ ++K     D ++ + L+  YGKC  +   + + S + D+++ V  N++ S 
Sbjct: 609 ELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG 668

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            ++     +A+++   +    + ++G TF+ VL ACA +  LE+G  +H  +++A  + D
Sbjct: 669 YIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESD 728

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           I + SA++DMY KCG I+ A R F  +   +L  WN+M+ GYA+HG   +  +LF +M  
Sbjct: 729 IVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKL 788

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            G  PD +T++ VL++C HAGLV E  ++   MS+++GL P++EH++C+VDLLGRVG L 
Sbjct: 789 QGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELN 848

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNL 690
             +  ++QMP+ P+  IW+++L AC      N  LG  A   LLE++P N   Y+LLSN+
Sbjct: 849 KMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNM 908

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           YAS G W+DV K R  M++ F+ KE G SW+ +    H F AGD SH +   IY++L +L
Sbjct: 909 YASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKEL 968

Query: 751 YEHM 754
              M
Sbjct: 969 NGKM 972



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 188/726 (25%), Positives = 346/726 (47%), Gaps = 33/726 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  L KNG   D  L  TLI+ + +  D     +   +   R++++++ LISG  R  
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
               A +LF ++   G  P+ + F S+++AC    E  +     +HG+  K  + + V  
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 116 VSGFIENYAKS-GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL- 173
            +  I  Y  + G +  A   F      + V+  +M+  Y   G+   + ++F  M+   
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 174 ---GLELNEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
              GL+ NE++  +++ A+  +        EQ+     K GFL  +  ++ +A+++ + +
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDL--YVGSALVSGFAK 331

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINL 282
            G    A  +F +++  +VVS +  I        G EA  LF +++ +  ++N  + + +
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELNPNSYMII 390

Query: 283 LSSVGGERIL----RAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYL 337
           L++     +L    R G ++ AF  + G +   ++IGN LI+MY KCG +NDA  +F  +
Sbjct: 391 LTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLM 450

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             KDSV+WNSMI G  +N  F +A+  F  M    L P+ +TM S L + ++   +    
Sbjct: 451 DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGE 510

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q+H   +K G  LD S+ + L+  YG+C  + E ++  S +   + V  N+L   L  + 
Sbjct: 511 QLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSE 570

Query: 458 CHA-EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EA+E +  +  +  + N  TF  +L A ++++  E GK IH L LK     D  +E
Sbjct: 571 PSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIE 630

Query: 517 SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
           +A++  Y KCG +   +  F ++  R     WN+M+ GY  +    +  ++   M + G 
Sbjct: 631 NALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQ 690

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           + D  T+  VL++C     +        C S    L   +   + +VD+  + G ++ A 
Sbjct: 691 RLDGFTFATVLSACATVATLERGMEVHGC-SVRACLESDIVIGSALVDMYAKCGRIDYAS 749

Query: 636 MTIDQMPIPPDAHIWQSLLS--ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
              + MP   + + W S++S  A   +G   L L A  KL    PD+  T+V + +  + 
Sbjct: 750 RFFEMMP-ARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDH-VTFVGVLSACSH 807

Query: 694 AGMWND 699
           AG+ N+
Sbjct: 808 AGLVNE 813



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 271/527 (51%), Gaps = 39/527 (7%)

Query: 90  ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYT 148
           +CGS ++ E +H    K GF + ++L +  I  YA+ G++ S    F D + L N V+++
Sbjct: 86  SCGS-KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVF-DEMPLRNLVSWS 143

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGV 203
            ++ GY  N   +++ E+F +M S G   N ++  +V+ A      + +K G QIHG   
Sbjct: 144 CLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMS 203

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIAAAC---DGVE 259
           K  +++ V    +N ++++Y      +D A + FD I   ++VS +  I+  C   D V 
Sbjct: 204 KTQYVNDVT--ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261

Query: 260 AFGLF----KDLRFNDFQINEYTMINLLSSV-----GGERILRAGKQIQAFCYKVGFMEV 310
           AF +F    K++  +  + NEYT  +L+S+       G  +L   +Q+     K GF+  
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL---EQLLTRVEKSGFLHD 318

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + +G+AL+S + K G +  A++IF  + +++ VS N +I G        +A+++F  M +
Sbjct: 319 LYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKD 378

Query: 371 -FSLIPNGYTMASILEAVSNSKSL----KQAMQVHSHIIKSGFLLDDSMI-SCLITTYGK 424
              L PN Y +  IL A      L    ++  +VH+ +I+SG L     I + LI  Y K
Sbjct: 379 SVELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAK 436

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C A+N++  V   +D K++V  N++ + L       EA++ ++ +  +  E+  S F+++
Sbjct: 437 CGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRT--ELYPSNFTMI 494

Query: 485 --LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
             L +CA++  +  G+ +HC  LK   D D+ V +A++ +Y +CG +++ ++AF  +   
Sbjct: 495 SALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY 554

Query: 543 SLAGWNAMMMGYA-QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
               WN+++   A       E    F  M + G  P+ +T++ +L +
Sbjct: 555 DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           K A ++H  + K+GF+ D  + + LI  Y +   L   ++V  E+  +N V  + L S  
Sbjct: 90  KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD--LEQGKAIHCLALKARYDQ 511
                  EA EL+R +       N   F  V++AC    +  L+ G  IH L  K +Y  
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209

Query: 512 DIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           D+   + +I MY    G ++ A+RAF  I   +L   N+M+  Y Q G      ++F+ M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269

Query: 571 SKF----GVKPDEITYLAVLTSCC---HAGLV 595
            K     G+KP+E T+ +++++ C   ++GLV
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLV 301


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 252/766 (32%), Positives = 410/766 (53%), Gaps = 17/766 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARFC 60
            ++  +   GH  D +   T+I+ + +    + A R LF +  + D++ +N +ISG  +  
Sbjct: 248  VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA-RLLFGEMSSPDVVAWNVMISGHGKRG 306

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                A++ F  +R   ++    T  S++ A G   +L    +VH   +KLG +S +Y+ S
Sbjct: 307  CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              +  Y+K  ++ +A   F    + ++V + AM+ GY  NGE  K  E+F++M+S G  +
Sbjct: 367  SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426

Query: 178  NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            ++F+ T++L    AS D++ G Q H   +K      +   + NA++++Y +CG   DA +
Sbjct: 427  DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL--FVGNALVDMYAKCGALEDARQ 484

Query: 235  MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            +F+ + + D V+W+  I +     +  EAF LFK +       +   + + L +      
Sbjct: 485  IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L  GKQ+     K G    +  G++LI MY KCG + DAR +F  L     VS N++IAG
Sbjct: 545  LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            YS+N    +A+ +F  ML   + P+  T A+I+EA    +SL    Q H  I K GF  +
Sbjct: 605  YSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663

Query: 412  DSMIS-CLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
               +   L+  Y     + E+  + SE+   K+ V    + S       + EAL+ Y+ +
Sbjct: 664  GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723

Query: 470  WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                   + +TF  VL+ C+ ++ L +G+AIH L     +D D    + +IDMY KCG +
Sbjct: 724  RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783

Query: 530  EDAKRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            + + + F ++ R S +  WN+++ GYA++G   +   +F+ M +  + PDEIT+L VLT+
Sbjct: 784  KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843

Query: 589  CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
            C HAG V + R     M   +G+  +++H AC+VDLLGR G L+ A   I+   + PDA 
Sbjct: 844  CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903

Query: 649  IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            +W SLL AC I+G+   G ++  KL+EL+P N S YVLLSN+YAS G W     LRK M+
Sbjct: 904  LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963

Query: 709  EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            ++ + K PGYSWI V   TH F AGD SHS+  +I   L  LY+ M
Sbjct: 964  DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLM 1009



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 192/741 (25%), Positives = 332/741 (44%), Gaps = 84/741 (11%)

Query: 39  FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE 98
           FD   +D+  +N+++S  +   + G  L+ F  L    + P+ FTFS ++  C      E
Sbjct: 118 FDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVE 177

Query: 99  I---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV 155
               +H   +K+G     Y     ++ YAK   I  A   F   +D + V +T +  GYV
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237

Query: 156 WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHL 215
             G  +++  VF  MR  G   +  +   V+                             
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----------------------------- 268

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFND 271
                N Y+R G+  DA  +F E++ PDVV+W+  I+      C+ V A   F ++R + 
Sbjct: 269 -----NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV-AIEYFFNMRKSS 322

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            +    T+ ++LS++G    L  G  + A   K+G    + +G++L+SMY KC ++  A 
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ L  K+ V WN+MI GY+ NG  ++ +++F  M       + +T  S+L   + S 
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L+   Q HS IIK     +  + + L+  Y KC AL +++++   +  ++ V  N +  
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             V     +EA +L++ +       +G+  +  LKAC  +  L QGK +HCL++K   D+
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+   S++IDMY KCG I+DA++ F  +   S+   NA++ GY+Q+    E   LF +M 
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEML 621

Query: 572 KFGVKPDEITYLAVLTSC-----------CHAGLVREART----YLSC-----------M 605
             GV P EIT+  ++ +C            H  + +   +    YL             M
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 681

Query: 606 SDLHGLIPQLEHYACIVDLLGRV------GLLEGAKMTIDQMP---IPPDAHIWQSLLSA 656
           ++   L  +L     IV   G +      G  E A     +M    + PD   + ++L  
Sbjct: 682 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRV 741

Query: 657 CTIYGNIDLGLLAGSKLLELQPD-NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           C++  ++  G    S +  L  D +E T   L ++YA  G      ++  EM+     + 
Sbjct: 742 CSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR----RS 797

Query: 716 PGYSWIH-VGGYTHHFYAGDS 735
              SW   + GY  + YA D+
Sbjct: 798 NVVSWNSLINGYAKNGYAEDA 818



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 263/557 (47%), Gaps = 47/557 (8%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L+  + VH   L LG  S   L +  ++ YAK  ++  AE  F D L+ D  A+ +M+ 
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLS 209
            Y   G+  K    FV +    +  N+F+ + VL       +V+ G QIH   +K+G   
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKD 266
              ++   A++++Y +C +  DA ++F+ I +P+ V W+        A    EA  +F+ 
Sbjct: 194 N--SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +R    + +    +                                    +I+ Y + G+
Sbjct: 252 MRDEGHRPDHLAFVT-----------------------------------VINTYIRLGK 276

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + DAR +F  +   D V+WN MI+G+ + G    A++ F +M + S+     T+ S+L A
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +    +L   + VH+  IK G   +  + S L++ Y KC  +  + +V   +++KN V  
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+     +     + +EL+  +  S   ++  TF+ +L  CAA  DLE G   H + +K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
            +  +++FV +A++DMY KCG +EDA++ F ++C      WN ++  Y Q     E  +L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHA-GLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           F +M+  G+  D     + L +C H  GL +  + +  C+S   GL   L   + ++D+ 
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH--CLSVKCGLDRDLHTGSSLIDMY 574

Query: 626 GRVGLLEGAKMTIDQMP 642
            + G+++ A+     +P
Sbjct: 575 SKCGIIKDARKVFSSLP 591



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 219/505 (43%), Gaps = 71/505 (14%)

Query: 162 KSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           KS++VF EM + L L L               + G+ +H   + +G  S     L NAI+
Sbjct: 60  KSRKVFDEMPQRLALAL---------------RIGKAVHSKSLILGIDSE--GRLGNAIV 102

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEY 277
           +LY +C Q   A K FD   E DV +W+  ++   +     +    F  L  N    N++
Sbjct: 103 DLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKF 161

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T   +LS+   E  +  G+QI     K+G       G AL+ MY KC +++DAR +F+++
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           +  ++V W  + +GY + G   +A+ +F  M +    P+     ++              
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-------------- 267

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
                                I TY +   L +++ +  E+   + V  N + S      
Sbjct: 268 ---------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
           C   A+E +  +  S  +   ST   VL A   + +L+ G  +H  A+K     +I+V S
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           +++ MY KC  +E A + F  +   +   WNAM+ GYA +G  H+V  LF  M   G   
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLL 631
           D+ T+ ++L++C        A   L   S  H +I + +          +VD+  + G L
Sbjct: 427 DDFTFTSLLSTCA-------ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSA 656
           E A+   ++M    D   W +++ +
Sbjct: 480 EDARQIFERM-CDRDNVTWNTIIGS 503



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 205/446 (45%), Gaps = 20/446 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q +S++IK     +  +   L+  + K     D R+ F  + D   RD +T+N +I    
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD---RDNVTWNTIIGSYV 505

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
           +      A  LF R+   G+  D    +S +KAC     L + + VH + +K G    ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             S  I+ Y+K G I  A   F    +   V+  A++ GY  N   +++  +F EM + G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRG 624

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  +E +   ++ A    +    G Q HG   K GF S    +L  +++ +Y+      +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF-SSEGEYLGISLLGMYMNSRGMTE 683

Query: 232 AVKMFDEITEP-DVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A  +F E++ P  +V W+  ++         EA   +K++R +    ++ T + +L    
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS-VSWN 346
               LR G+ I +  + +         N LI MY KCG +  +  +FD +  + + VSWN
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWN 803

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-K 405
           S+I GY++NG+   AL +F  M +  ++P+  T   +L A S++  +    ++   +I +
Sbjct: 804 SLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ 863

Query: 406 SGFLLDDSMISCLITTYGKCNALNES 431
            G       ++C++   G+   L E+
Sbjct: 864 YGIEARVDHVACMVDLLGRWGYLQEA 889


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 255/766 (33%), Positives = 411/766 (53%), Gaps = 20/766 (2%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            +++  + K G   D +   T+I+          A        N +++ +N +ISG  +  
Sbjct: 269  KVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRG 328

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
                A+  F  +   G++    T  S++ A  SL+      +VH   +K G +S VY+ S
Sbjct: 329  CDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGS 388

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I  YAK  ++ +A+  F D LD  N V + AM+ GY  NG   K  ++F EMR  G  
Sbjct: 389  SLINMYAKCEKMEAAKKVF-DALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFW 447

Query: 177  LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             +EF+ T++L A   ++    G Q+H F +K  F   +   + N ++++Y +CG   +A 
Sbjct: 448  PDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNL--FVENTLVDMYAKCGALEEAR 505

Query: 234  KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            + F+ I   D VSW+  I       D  EAF +F+ +  +    +E ++ ++LS     +
Sbjct: 506  QQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQ 565

Query: 291  ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             L  G+Q+  F  K G    +  G++LI MY KCG +  AR +F  +  +  VS N++IA
Sbjct: 566  ALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIA 625

Query: 351  GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            GY++N    +A+D+F  M    L P+  T AS+L+A +    L    Q+H  I K G L 
Sbjct: 626  GYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLY 684

Query: 411  D-DSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRT 468
            D D +   L+  Y       ++  + SE    K+ +   A+ S      C  EAL+LY+ 
Sbjct: 685  DGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQE 744

Query: 469  IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
            +  +    + +TF+ VL+AC+ +  L  G+ IH L      D D    SAV+DMY KCG 
Sbjct: 745  MHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGD 804

Query: 529  IEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++ + + F ++  ++ +  WN+M++G+A++G       +F++M    ++PD++T+L VLT
Sbjct: 805  MKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLT 864

Query: 588  SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
            +C HAG V E R     M   + ++P+L+H AC++DLLGR G L+ A+  ID++   P+A
Sbjct: 865  ACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNA 924

Query: 648  HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
             IW +LL AC I+G+   G  A  KL+EL+P+N S YVLLSN+YA++G W++V  +R+ M
Sbjct: 925  MIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAM 984

Query: 708  KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY---KELIKL 750
            +EK L K PG SWI VG  T+ F AGD  H  + EI+   K+LI L
Sbjct: 985  REKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIAL 1030



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 164/595 (27%), Positives = 293/595 (49%), Gaps = 43/595 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  +K G      L + ++  + K  +   A +     + RDI+ +N+++S  +R   
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
               +  F  L+  G+ P+ FT++ ++ +C  L + ++   VH   +K+GF    +    
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ Y+K G +V A   F   +D D V++TAM+ GYV  G  +++ +VF +M+ LGL  +
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + +   V+ A                                   V  G+  DA  +F +
Sbjct: 283 QVAFVTVITAC----------------------------------VGLGRLDDACDLFVQ 308

Query: 239 ITEPDVVSW----SERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           +   +VV+W    S  +   CD +EA   FK++     +    T+ ++LS++     L  
Sbjct: 309 MPNTNVVAWNVMISGHVKRGCD-IEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNY 367

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G  + A   K G    V +G++LI+MY KC ++  A+ +FD L  ++ V WN+M+ GY++
Sbjct: 368 GLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQ 427

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG+ ++ + +F  M      P+ +T  SIL A +  + L+   Q+HS IIK  F  +  +
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFV 487

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y KC AL E+++    I  ++ V  NA+    V      EA  ++R +     
Sbjct: 488 ENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGI 547

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +  + + +L  CA +  LEQG+ +HC  +K+     ++  S++IDMY KCG IE A+ 
Sbjct: 548 APDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARY 607

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            F  +   S+   NA++ GYAQ+    E  +LF +M   G+ P EIT+ ++L +C
Sbjct: 608 VFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDAC 661



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 182/695 (26%), Positives = 329/695 (47%), Gaps = 56/695 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++  +IK G   +     +LI  ++K     D R+ F  + D    D +++ A+I+G  
Sbjct: 203 QVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDP---DTVSWTAMIAGYV 259

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +      ALK+F+ ++  GL PD   F +++ AC  L                       
Sbjct: 260 QVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL----------------------- 296

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                    G +  A   F    + + VA+  M+ G+V  G   ++ + F  M   G++ 
Sbjct: 297 ---------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKS 347

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
              +L +VL A   ++    G  +H   +K G  S V  ++ ++++N+Y +C +   A K
Sbjct: 348 TRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNV--YVGSSLINMYAKCEKMEAAKK 405

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E ++V W+  +   A +G   +   LF ++R   F  +E+T  ++LS+      
Sbjct: 406 VFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLEC 465

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+Q+ +F  K  F   + + N L+ MY KCG + +AR  F+++  +D+VSWN++I G
Sbjct: 466 LEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVG 525

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y +    ++A +MF  M+   + P+  ++ASIL   +N ++L+Q  QVH  ++KSG    
Sbjct: 526 YVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTC 585

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH-AEALELYRTIW 470
               S LI  Y KC A+  ++ V S +  ++ V +NA+  +  YA     EA++L++ + 
Sbjct: 586 LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAI--IAGYAQNDLVEAIDLFQEMQ 643

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR--YDQDIFVESAVIDMYCKCGT 528
                 +  TF+ +L AC     L  G+ IHCL  K    YD D F+  +++ MY     
Sbjct: 644 NEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGD-FLGVSLLVMYMNSQR 702

Query: 529 IEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
             DA   F +     S   W A++ G+ Q+GC  E   L+ +M +   +PD+ T+ +VL 
Sbjct: 703 KTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLR 762

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C     + + R   S +  + GL       + +VD+  + G ++ +    ++M    D 
Sbjct: 763 ACSILASLGDGRMIHSLIFHV-GLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDV 821

Query: 648 HIWQSLLS--ACTIYGNIDLGLLAGSKLLELQPDN 680
             W S++   A   Y    L +    K   ++PD+
Sbjct: 822 ISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDD 856



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 273/555 (49%), Gaps = 46/555 (8%)

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           + ++ +H   LK GF S+  L S  ++ YAK G +  A   F      D +A+ +++  Y
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGF-LSG 210
              G  ++    F  +++ G+  N+F+   VL +     D+  G+Q+H   +K+GF  + 
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDL 267
            C     +++++Y +CG  +DA K+FD + +PD VSW+  IA         EA  +F+D+
Sbjct: 218 FC---EGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM 274

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                                       +++     +V F+ V++    L       G++
Sbjct: 275 ----------------------------QKLGLVPDQVAFVTVITACVGL-------GRL 299

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
           +DA  +F  +   + V+WN MI+G+ + G   +A+D F +M +  +     T+ S+L A+
Sbjct: 300 DDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAI 359

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           ++ ++L   + VH+  IK G   +  + S LI  Y KC  +  +K+V   +D++N V  N
Sbjct: 360 ASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWN 419

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           A+          ++ ++L+  + G     +  T++ +L ACA +  LE G+ +H   +K 
Sbjct: 420 AMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKH 479

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            ++ ++FVE+ ++DMY KCG +E+A++ F  I       WNA+++GY Q     E  N+F
Sbjct: 480 NFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMF 539

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M   G+ PDE++  ++L+ C +   + +    + C     GL   L   + ++D+  +
Sbjct: 540 RRMILDGIAPDEVSLASILSGCANLQALEQGEQ-VHCFLVKSGLQTCLYAGSSLIDMYVK 598

Query: 628 VGLLEGAKMTIDQMP 642
            G +E A+     MP
Sbjct: 599 CGAIEAARYVFSCMP 613



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 48/392 (12%)

Query: 364 MFCHMLEFSLI---------PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +F H+L+  L          P   T   + +A   SK+      +H+  +K GF     +
Sbjct: 65  IFTHLLKICLQQCQRIKIRHPFDETPQRLAQASRTSKT------IHAQTLKFGFGSKGRL 118

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S ++  Y KC  +  + +  ++++K++ +  N++ S+        + +  + ++     
Sbjct: 119 GSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGV 178

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             N  T++IVL +CA + D++ GK +HC  +K  ++ + F E ++IDMY KCG++ DA++
Sbjct: 179 SPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARK 238

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  +       W AM+ GY Q G   E   +F  M K G+ PD++ ++ V+T+C   G 
Sbjct: 239 IFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGR 298

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ--- 651
           + +A        DL   +P     A  V + G V      K   D   I    ++W+   
Sbjct: 299 LDDA-------CDLFVQMPNTNVVAWNVMISGHV------KRGCDIEAIDFFKNMWKTGV 345

Query: 652 --------SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV--LLSNLYASAGMWNDVG 701
                   S+LSA      ++ GLL  ++ ++ Q  N + YV   L N+YA         
Sbjct: 346 KSTRSTLGSVLSAIASLEALNYGLLVHAQAIK-QGLNSNVYVGSSLINMYAKCEKMEAAK 404

Query: 702 KLRKEMKEKFLCKEPGYSW-IHVGGYTHHFYA 732
           K+   + E+ L       W   +GGY  + YA
Sbjct: 405 KVFDALDERNLVL-----WNAMLGGYAQNGYA 431


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/750 (30%), Positives = 420/750 (56%), Gaps = 12/750 (1%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +   LIS + K  +   A +   +  ++D+ ++N L+ G  +  +   A +L +++ 
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G++PD +TF  ++ AC    ++ +   +  + L  G+ + +++ +  I  + K G + 
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVD 257

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A   F +    D + +T+M+ G   + +F ++  +F  M   G++ ++ +  ++L A  
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACN 317

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               +++G+++H    +VG  + +  ++  A++++Y +CG   DA+++F+ +   +VVSW
Sbjct: 318 HPEALEQGKRVHARMKEVGLDTEI--YVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSW 375

Query: 248 SERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  IA  A  G   EAF  F  +  +  + N  T +++L +      L+ G+QI     K
Sbjct: 376 TAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK 435

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            G++    +  AL+SMY KCG + DAR++F+ +  ++ V+WN+MI  Y ++  ++ A+  
Sbjct: 436 AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVAT 495

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  +L+  + P+  T  SIL    +  +L+    V S II++GF  D  + + L++ +  
Sbjct: 496 FQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVN 555

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C  L  +  + +++ +++ V  N + +  V    +  A + ++ +  S  + +  TF+ +
Sbjct: 556 CGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGL 615

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L ACA+   L +G+ +H L  +A  D D+ V + +I MY KCG+I+DA   F  + + ++
Sbjct: 616 LNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNV 675

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             W +M+ GYAQHG   E   LF +M + GVKPD IT++  L++C HAGL++E   +   
Sbjct: 676 YSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFES 735

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           M D + + P++EHY C+VDL GR GLL  A   I++M + PD+ +W +LL AC ++ +++
Sbjct: 736 MKDFN-IEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVE 794

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           L      K LEL P+++  YV+LSN+YA+AGMW +V K+RK M ++ + K+PG SWI V 
Sbjct: 795 LAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVD 854

Query: 725 GYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G  H F + D +H Q +EI+ EL +L+  M
Sbjct: 855 GRVHIFCSDDKTHPQIEEIHAELGRLHMEM 884



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 167/643 (25%), Positives = 321/643 (49%), Gaps = 34/643 (5%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLK 106
           NA ++ L++  Q   A+ +   +    ++    T+SSL++ C    +L + E +H     
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
                 +++ +  I  YAK G   SA+  F +  D D  ++  ++ GYV +  ++++  +
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 167 FVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             +M   G++ ++++   +L A  D K   +G ++    +  G+ + +   +  A++N++
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDL--FVGTALINMH 250

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
           ++CG   DA+K+F+ +   D+++W+  I          +A  LF+ +     Q ++   +
Sbjct: 251 IKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFV 310

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +LL +      L  GK++ A   +VG    + +G AL+SMY KCG + DA  +F+ +  +
Sbjct: 311 SLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW +MIAG++++G   +A   F  M+E  + PN  T  SIL A S   +LKQ  Q+H
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             IIK+G++ DD + + L++ Y KC +L +++ V   I K+N V  NA+ +  V    + 
Sbjct: 431 DRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYD 490

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            A+  ++ +     + + STF+ +L  C +   LE GK +  L ++A ++ D+ + +A++
Sbjct: 491 NAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALV 550

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            M+  CG +  A   F  +    L  WN ++ G+ QHG      + F  M + GVKPD+I
Sbjct: 551 SMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQI 610

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC-------IVDLLGRVGLLEG 633
           T+  +L +C     + E R        LH LI +     C       ++ +  + G ++ 
Sbjct: 611 TFTGLLNACASPEALTEGRR-------LHALITEAA-LDCDVVVGTGLISMYTKCGSIDD 662

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           A +    +P   + + W S+++    +G        G + LEL
Sbjct: 663 AHLVFHNLP-KKNVYSWTSMITGYAQHGR-------GKEALEL 697



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 290/598 (48%), Gaps = 45/598 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++SL++  G   D  + T LI+   K      A +   +   RD+IT+ ++I+GLAR  
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   A  LF  +  +G++PD   F SL+KAC    +L++ + VH    ++G  + +Y+ +
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G +  A   F      + V++TAM+ G+  +G  +++   F +M   G+E 
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +  ++LGA      +K+G QIH   +K G+++   + +  A++++Y +CG  +DA  
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD--DRVRTALLSMYAKCGSLMDARN 463

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ I++ +VV+W+  I A     +   A   F+ L     + +  T  ++L+       
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK +Q+   + GF   + I NAL+SM+  CG +  A ++F+ +  +D VSWN++IAG
Sbjct: 524 LELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAG 583

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           + ++G    A D F  M E  + P+  T   +L A ++ ++L +  ++H+ I ++    D
Sbjct: 584 FVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCD 643

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI+ Y KC +++++  V   + KKN     ++ +         EALEL+  +  
Sbjct: 644 VVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQ 703

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + +  TF   L ACA    +++G   H  ++K     D  +E  +    C       
Sbjct: 704 EGVKPDWITFVGALSACAHAGLIKEGLH-HFESMK-----DFNIEPRMEHYGC------- 750

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                             M+  + + G  HE     NKM    VKPD   + A+L +C
Sbjct: 751 ------------------MVDLFGRAGLLHEAVEFINKMQ---VKPDSRLWGALLGAC 787



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 81/155 (52%)

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +D KN    NA  + L  A   +EA+ +  ++     +++  T+S +L+ C    +L  G
Sbjct: 64  VDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDG 123

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + IH     ++   DIF+ + +I MY KCG    AK+ F ++    +  WN ++ GY QH
Sbjct: 124 ERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQH 183

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
             Y E   L  +M + GVKPD+ T++ +L +C  A
Sbjct: 184 RRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADA 218


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/794 (30%), Positives = 413/794 (52%), Gaps = 42/794 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I  G      ++  L+  + K +    AF+       RD+I++N LI G A   
Sbjct: 27  QVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIG 86

Query: 61  QSGPALKLFD-------------------------------RLRYQGLRPDAFTFSSLVK 89
             G A  LFD                               R+R   +  D  TF+ ++K
Sbjct: 87  NMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILK 146

Query: 90  ACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC  +++  +   VH + +++GF + V   S  ++ Y+K  ++  A   FR+  + + V 
Sbjct: 147 ACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVC 206

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGV 203
           ++A++ GYV N  F +  ++F +M  +G+ +++ +  +V  +   +   K G Q+HG  +
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHAL 266

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEA 260
           K  F     + +  A +++Y +C +  DA K+F+ +  P   S++  I   A    G++A
Sbjct: 267 KSDF--AYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKA 324

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             +F+ L+ N+   +E ++   L++    +    G Q+     K G    + + N ++ M
Sbjct: 325 LDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDM 384

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           YGKCG + +A  IF+ +  +D+VSWN++IA + +N    + L +F  ML  ++ P+ +T 
Sbjct: 385 YGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
            S+++A +  ++L    ++H  IIKSG  LD  + S L+  YGKC  L E++++ + +++
Sbjct: 445 GSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEE 504

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           K  V  N++ S          A   +  +       +  T++ VL  CA M  +E GK I
Sbjct: 505 KTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQI 564

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H   LK +   D+++ S ++DMY KCG ++D++  F K  +     W+AM+  YA HG  
Sbjct: 565 HAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLG 624

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            +  NLF +M    VKP+   +++VL +C H G V +   Y   M   +GL PQ+EHY+C
Sbjct: 625 EKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSC 684

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           +VDLLGR G +  A   I+ MP   D  IW++LLS C + GN+++   A + LL+L P +
Sbjct: 685 MVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQD 744

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
            S YVLL+N+YA  GMW +V K+R  MK   L KEPG SWI V    H F  GD +H +S
Sbjct: 745 SSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRS 804

Query: 741 KEIYKELIKLYEHM 754
           +EIY++   L + M
Sbjct: 805 EEIYEQTHLLVDEM 818


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 255/768 (33%), Positives = 411/768 (53%), Gaps = 21/768 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARFC 60
            ++  +   GH  D +   T+I+ +      + A R LF +  + D++ +N +ISG  +  
Sbjct: 248  VFERMRGEGHRPDHLAFVTVINTYISLGKLKDA-RLLFGEMPSPDVVAWNVMISGHGKRG 306

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                A++ F  +R   ++    T  S++ A G   +L    +VH   +KLG +S +Y+ S
Sbjct: 307  CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              +  Y+K  ++ +A   F    + ++V + AM+ GY  NGE  K  E+F++M+S G  +
Sbjct: 367  SLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426

Query: 178  NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            ++F+ T++L     S D++ G Q H   +K      +   + NA++++Y +CG   DA +
Sbjct: 427  DDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNL--FVGNALVDMYAKCGALEDARQ 484

Query: 235  MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGE 289
            +F+ + + D VSW+  I       +  EAF LF  +R N   I  +   + + L +    
Sbjct: 485  IFEHMCDRDNVSWNTIIGGYVQDENESEAFDLF--MRMNSCGIVSDGACLASTLKACTNV 542

Query: 290  RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
              L  GKQ+     K G   V+  G++LI MY KCG + DAR +F  +     VS N++I
Sbjct: 543  HGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALI 602

Query: 350  AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            AGYS+N    +A+ +F  ML   + P+  T A+I+EA    +SL    Q H  IIK GF 
Sbjct: 603  AGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFS 661

Query: 410  LDDSMIS-CLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYR 467
             +   +   L+  Y     + E+  + SE+   K+ V    + S       + EAL+ Y+
Sbjct: 662  SEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721

Query: 468  TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
             +       + +TF  VL+ C+ ++ L +G+AIH L     +D D    + +IDMY KCG
Sbjct: 722  EMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCG 781

Query: 528  TIEDAKRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
             ++ + + F ++ R S +  WN+++ GYA++G   +   +F+ M +  + PDEIT+L VL
Sbjct: 782  DMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVL 841

Query: 587  TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
            T+C HAG V + R     M   +G+  +++H AC+VDLLGR G L+ A   I+   + PD
Sbjct: 842  TACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPD 901

Query: 647  AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
            A +W SLL AC I+G+   G +A  +L+EL+P N S YVLLSN+YAS G W +   LRK 
Sbjct: 902  ARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKA 961

Query: 707  MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            M+++ + K PGYSWI VG   H F AGD SHS   +I   L  LY+ M
Sbjct: 962  MRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLYDLM 1009



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 191/742 (25%), Positives = 331/742 (44%), Gaps = 86/742 (11%)

Query: 39  FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE 98
           F++  +D+  +N+++S  +   Q G  L+ F  L    + P+ FTFS ++         E
Sbjct: 118 FNSLEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVE 177

Query: 99  I---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV 155
               +H   +K+G     Y     ++ YAK   +  A+  F   +D + V +T +  GYV
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYV 237

Query: 156 WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHL 215
             G  +++  VF  MR  G   +  +   V+                             
Sbjct: 238 KAGLPEEAVIVFERMRGEGHRPDHLAFVTVI----------------------------- 268

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFND 271
                N Y+  G+  DA  +F E+  PDVV+W+  I+      C+ V A   F ++R + 
Sbjct: 269 -----NTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIV-AIEYFLNMRKSS 322

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            +    T+ ++LS++G    L  G  + A   K+G    + +G++L+SMY KC ++  A 
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ L  ++ V WN+MI GY+ NG  ++ +++F  M       + +T  S+L   + S 
Sbjct: 383 KVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSH 442

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L+   Q HS IIK     +  + + L+  Y KC AL +++++   +  ++ V  N +  
Sbjct: 443 DLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIG 502

Query: 452 VLVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
             V     +EA +L+  +  SC  V +G+  +  LKAC  +  L QGK +HCL++K   D
Sbjct: 503 GYVQDENESEAFDLFMRM-NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLD 561

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           + +   S++IDMY KCG IEDA++ F  +   S+   NA++ GY+Q+    E   LF +M
Sbjct: 562 RVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN-LEEAVVLFQEM 620

Query: 571 SKFGVKPDEITYLAVLTSC-----------CHAGLVR----EARTYLSC----------- 604
              GV P EIT+  ++ +C            H  +++        YL             
Sbjct: 621 LTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRR 680

Query: 605 MSDLHGLIPQLEHYACIVDLLGRV------GLLEGAKMTIDQMP---IPPDAHIWQSLLS 655
           M++   L  +L     IV   G +      G  E A     +M      PD   + ++L 
Sbjct: 681 MAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLR 740

Query: 656 ACTIYGNIDLGLLAGSKLLELQPD-NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            C++  ++  G    S +  L  D +E T   L ++YA  G      ++  EM+     +
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRR----R 796

Query: 715 EPGYSWIH-VGGYTHHFYAGDS 735
               SW   + GY  + YA D+
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDA 818



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 267/557 (47%), Gaps = 47/557 (8%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L+  + VH   L LG  S   L +  ++ YAK  ++  AE  F + L+ D  A+ +M+ 
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-NSLEKDVTAWNSMLS 133

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLS 209
            Y   G+  K    FV +    +  N+F+ + VL  S    +V+ G QIH   +K+G   
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKD 266
              ++   A++++Y +C +  DA ++FD I +P+ V W+        A    EA  +F+ 
Sbjct: 194 N--SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFER 251

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +R                   GE             ++   +  V++ N  IS+    G+
Sbjct: 252 MR-------------------GE------------GHRPDHLAFVTVINTYISL----GK 276

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + DAR +F  +   D V+WN MI+G+ + G    A++ F +M + S+     T+ S+L A
Sbjct: 277 LKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +    +L   + VH+  IK G   +  + S L++ Y KC  +  + +V   ++++N V  
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLW 396

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+     +     + +EL+  +  S   ++  TF+ +L  CA   DLE G   H + +K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIK 456

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
            +  +++FV +A++DMY KCG +EDA++ F  +C      WN ++ GY Q     E  +L
Sbjct: 457 KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHA-GLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           F +M+  G+  D     + L +C +  GL +  + +  C+S   GL   L   + ++D+ 
Sbjct: 517 FMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVH--CLSVKCGLDRVLHTGSSLIDMY 574

Query: 626 GRVGLLEGAKMTIDQMP 642
            + G++E A+     MP
Sbjct: 575 SKCGIIEDARKVFSSMP 591



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 209/446 (46%), Gaps = 20/446 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q +S++IK     +  +   L+  + K     D R+ F  + D   RD +++N +I G  
Sbjct: 449 QFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD---RDNVSWNTIIGGYV 505

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
           +      A  LF R+   G+  D    +S +KAC +   L + + VH + +K G    ++
Sbjct: 506 QDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLH 565

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             S  I+ Y+K G I  A   F    +   V+  A++ GY  N   +++  +F EM + G
Sbjct: 566 TGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKG 624

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  +E +   ++ A    +    G Q HG  +K GF S    +L  +++ LY+   +  +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGF-SSEGEYLGISLLGLYMNSRRMAE 683

Query: 232 AVKMFDEITEP-DVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A  +F E++ P  +V W+  ++         EA   +K++R +    ++ T + +L    
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCS 743

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS-VSWN 346
               LR G+ I +  + +         N LI MY KCG +  +  +FD +  + + VSWN
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWN 803

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-K 405
           S+I GY++NG+   AL +F  M +  ++P+  T   +L A S++  +    ++   +I +
Sbjct: 804 SLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ 863

Query: 406 SGFLLDDSMISCLITTYGKCNALNES 431
            G       ++C++   G+   L E+
Sbjct: 864 YGIEARVDHVACMVDLLGRWGYLQEA 889



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 210/488 (43%), Gaps = 66/488 (13%)

Query: 162 KSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           KS++VF EM   L L L               + G+ +H   + +G  S     L NAI+
Sbjct: 60  KSRKVFDEMPHRLALAL---------------RIGKAVHSKSLILGIDSE--GRLGNAIV 102

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSE------RIAAACDGVEAF-GLFKDLRFNDFQ 273
           +LY +C Q   A K F+ + E DV +W+        I      + +F  LF++L F    
Sbjct: 103 DLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFP--- 158

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N++T   +LS+   E  +  G+QI     K+G       G AL+ MY KC ++ DA+ +
Sbjct: 159 -NKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRV 217

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD ++  ++V W  + +GY + G   +A+ +F  M      P+     ++          
Sbjct: 218 FDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV---------- 267

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
                                    I TY     L +++ +  E+   + V  N + S  
Sbjct: 268 -------------------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGH 302

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
               C   A+E +  +  S  +   ST   VL A   + +L+ G  +H  A+K     +I
Sbjct: 303 GKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V S+++ MY KC  +E A + F  +   +   WNAM+ GYA +G  H+V  LF  M   
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSS 422

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G   D+ T+ ++L++C  +  +     + S +     L   L     +VD+  + G LE 
Sbjct: 423 GYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIK-KKLTKNLFVGNALVDMYAKCGALED 481

Query: 634 AKMTIDQM 641
           A+   + M
Sbjct: 482 ARQIFEHM 489



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 17/308 (5%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L+    VHS  +  G   +  + + ++  Y KC  ++ +++  + ++ K+    N++ S
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLS 133

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
           +        + L  + +++ +    N  TFSIVL   A  T++E G+ IHC  +K   ++
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           + +   A++DMY KC  + DA+R F  I   +   W  +  GY + G   E   +F +M 
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             G +PD + ++ V+ +    G +++AR     M       P +  +  ++   G+ G  
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCE 308

Query: 632 EGAK---MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
             A    + + +  +        S+LSA  I  N+DLGL+  ++ ++L         L S
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LAS 360

Query: 689 NLYASAGM 696
           N+Y  + +
Sbjct: 361 NIYVGSSL 368



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 4/215 (1%)

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GKA+H  +L    D +  + +A++D+Y KC  +  A++ F  + +D +  WN+M+  
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKD-VTAWNSMLSM 134

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y+  G   +V   F  + +  + P++ T+  VL++      V   R  + C     GL  
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQ-IHCSMIKMGLER 193

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
                  +VD+  +   L  A+   D + + P+   W  L S     G  +  ++   ++
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGI-VDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 674 L-ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
             E    +   +V + N Y S G   D   L  EM
Sbjct: 253 RGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/746 (31%), Positives = 399/746 (53%), Gaps = 17/746 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +   ++IS +    +   A +F ++   RD++++N++ISG  +  +   ++ +F  + 
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+  D  + + ++KACG+L+E ++   VHG+ +K GF   V   S  +  YAK   + 
Sbjct: 174 RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD 233

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE------FSLTA 184
            +   F +  + + V+++AM+ G V N    +  E+F EM+ +G+ +++      F   A
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293

Query: 185 VLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
            L A   ++ G+++H   +K  F S +   +  A +++Y +CG+  DA K+   + +  +
Sbjct: 294 ALSA---LRLGKELHSHALKSAFGSDII--VGTATLDMYAKCGRMADAQKVLSSMPKCSL 348

Query: 245 VSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
            S++  I   A +  G +A   F+ L       +E T+   L++    R    G+Q+   
Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGL 408

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K   M  + + NA++ MYGKC  + +A  +FD +  +D+VSWN++IA   +NG   + 
Sbjct: 409 AVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEET 468

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L  F  M+   + P+ +T  S+L+A +  ++L   M++H+ IIKSG   D  + + L+  
Sbjct: 469 LAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDM 528

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  + ++ ++    ++K  V  NA+ S         +A + +  +       +  T+
Sbjct: 529 YCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTY 588

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL  CA +  +  GK IH   +K     D+++ S ++DMY KCG ++D++  F K   
Sbjct: 589 AAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPN 648

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                WNAM+ GYA HG   E   LF  M    VKP+  T+++VL +C H GLV +   Y
Sbjct: 649 RDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHY 708

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M   +GL PQ EHY+C+VD+LGR G ++ A   + +MP   DA IW++LLS C I+G
Sbjct: 709 FDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHG 768

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N+++   A   LL+L P + S  VLLSN+YA AGMW +V ++RK M+   L KEPG SWI
Sbjct: 769 NVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWI 828

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKEL 747
            +    H F  GD  H + +EIY++L
Sbjct: 829 ELKDEVHAFLVGDKGHPRDEEIYEKL 854



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 268/552 (48%), Gaps = 18/552 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L++K G   D +  + L+  + K      +     +   ++ ++++A+I+G  +  
Sbjct: 202 QVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQND 261

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           ++   L+LF  ++  G+      ++SL ++C +L    +   +H   LK  F S + + +
Sbjct: 262 RNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGT 321

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G +  A+            +Y A++ GY  +    ++ + F  +   GL  
Sbjct: 322 ATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGF 381

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E +L+  L A   ++   EG Q+HG  VK   +S +C  + NAI+++Y +C    +A  
Sbjct: 382 DEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNIC--VANAILDMYGKCKALAEASD 439

Query: 235 MFDEITEPDVVSWSERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +FD +   D VSW+  I AAC+      E    F  +  +  + +++T  ++L +  G +
Sbjct: 440 LFDMMERRDAVSWNA-IIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQ 498

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G +I     K G      +G AL+ MY KCG +  A  I D    K  VSWN++I+
Sbjct: 499 ALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIIS 558

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+S       A   F  MLE  + P+ +T A++L+  +N  ++    Q+H+ IIK     
Sbjct: 559 GFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQS 618

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + S L+  Y KC  + +S+ +  +   ++ V  NA+     +     EAL+L+ ++ 
Sbjct: 619 DVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQ 678

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCG 527
               + N +TF  VL+ACA M  +++G  +H    + + Y  D   E  S ++D+  + G
Sbjct: 679 LVNVKPNHATFVSVLRACAHMGLVDKG--LHYFDVMLSEYGLDPQSEHYSCMVDILGRSG 736

Query: 528 TIEDAKRAFRKI 539
            I++A    +K+
Sbjct: 737 RIDEALNLVQKM 748



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 209/443 (47%), Gaps = 50/443 (11%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ  A     GF     + N L+ MY KC  ++ A  +FD +  +D VS+NS+I+G
Sbjct: 65  LNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISG 124

Query: 352 YS-------------------------------ENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y+                               +NG   +++D+F  M    +  +  ++
Sbjct: 125 YASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASL 184

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A +L+A    +     +QVH  ++K GF  D    S L+  Y KC  L++S  V SE+ +
Sbjct: 185 AVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPE 244

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           KN V  +A+ +  V    + E LEL++ + G    V+ S ++ + ++CAA++ L  GK +
Sbjct: 245 KNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKEL 304

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H  ALK+ +  DI V +A +DMY KCG + DA++    + + SL  +NA+++GYA+    
Sbjct: 305 HSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRG 364

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL------IPQ 614
            +    F  + K G+  DEIT    L +C       E R        +HGL      +  
Sbjct: 365 FQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGR-------QVHGLAVKSISMSN 417

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +     I+D+ G+   L  A    D M    DA  W ++++AC   GN +  L   + ++
Sbjct: 418 ICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQNGNEEETLAHFASMI 476

Query: 675 --ELQPDNESTYVLLSNLYASAG 695
              ++PD+   +   S L A AG
Sbjct: 477 HSRMEPDD---FTYGSVLKACAG 496



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 240/531 (45%), Gaps = 52/531 (9%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR-------------------------- 225
           +  G+Q H   +  GF       ++N +M +Y++                          
Sbjct: 65  LNPGKQAHARMIFCGFEP--TTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSII 122

Query: 226 -----CGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEY 277
                CG+   A K F E+ E DVVSW+  I+      E   +  +F ++       +  
Sbjct: 123 SGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRA 182

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           ++  +L + G       G Q+     K GF   V  G+AL+ MY KC +++D+ S+F  L
Sbjct: 183 SLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSEL 242

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             K+ VSW++MIAG  +N    + L++F  M    +  +    AS+  + +   +L+   
Sbjct: 243 PEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGK 302

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           ++HSH +KS F  D  + +  +  Y KC  + ++++VLS + K +    NA+      + 
Sbjct: 303 ELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSD 362

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              +AL+ ++ +  +    +  T S  L ACA++    +G+ +H LA+K+    +I V +
Sbjct: 363 RGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVAN 422

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A++DMY KC  + +A   F  + R     WNA++    Q+G   E    F  M    ++P
Sbjct: 423 AILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEP 482

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ----LEHY--ACIVDLLGRVGLL 631
           D+ TY +VL +C         R  L+   ++H  I +     + +  A +VD+  + G++
Sbjct: 483 DDFTYGSVLKACA-------GRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMI 535

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL--QPDN 680
           E A    D+         W +++S  ++    +      S++LE+   PDN
Sbjct: 536 EKADKIHDRTEQKTMVS-WNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDN 585



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 42/215 (19%), Positives = 85/215 (39%), Gaps = 43/215 (20%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK-------------- 525
           TFS + + C+    L  GK  H   +   ++   FV + ++ MY K              
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 526 -----------------CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
                            CG ++ A++ F ++    +  WN+++ G+ Q+G   +  ++F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M + GV  D  +   VL +C   G + E    +     +HGL+ +      +V     +
Sbjct: 171 EMGRCGVGFDRASLAVVLKAC---GALEECDMGVQ----VHGLVVKFGFDCDVVTGSALL 223

Query: 629 GLLEGAKMTIDQMPI----PPDAHI-WQSLLSACT 658
           G+    K   D + +    P    + W ++++ C 
Sbjct: 224 GMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCV 258


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/687 (34%), Positives = 382/687 (55%), Gaps = 14/687 (2%)

Query: 80  DAFTFSSLVKAC-GSLQEN--EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D FTF  ++KAC GSL     E++HG+ +K+G    V++ +  I  Y K G + +A   F
Sbjct: 30  DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS--LGLELNEFSLTAVL---GASFD 191
                 + V++ +++ G+  NG      ++ VEM +   GL  +  +L  VL       D
Sbjct: 90  HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           V+ G +IHG  VK+G    V   +NN+++++Y +CG   +A  +FD+    + VSW+  I
Sbjct: 150 VQMGIRIHGLAVKLGLSEDV--RVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207

Query: 252 AAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
              C      EAF LF++++   D ++NE T++N+L +      LR+ K++  +  + GF
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGF 267

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                + N  ++ Y KCG +  A  +F  +  K   SWN++I G ++NG   +AL+++  
Sbjct: 268 QYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQ 327

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    L+P+ +T+ S+L A ++ KSL+   +VH  +++ G  +D  +   L++ Y  C  
Sbjct: 328 MTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGE 387

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
            + ++ +   +++K++V  NA+ S         +AL L+R +     + +      VL A
Sbjct: 388 SSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGA 447

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C+  + L  GK  HC ALKA   +D+FV  + IDMY K G I++++  F  +    LA W
Sbjct: 448 CSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASW 507

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           NA++  Y  HG   E   LF +M K G  PD  T++ +LT C HAGLV E   Y + M +
Sbjct: 508 NAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQN 567

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            HG+ P+LEHYAC++D+LGR G L+ A   + +MP  PD+ +W SLLS C  +G +++G 
Sbjct: 568 FHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQ 627

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
           +   KLLEL+P N   YV LSNLYA +G W+DV ++R+ +K+  L K+ G SWI +GG  
Sbjct: 628 IVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKV 687

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
           H F AGD+   QSKE+     KL + M
Sbjct: 688 HSFVAGDNLLPQSKEMSMTWRKLEKKM 714



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 272/556 (48%), Gaps = 35/556 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ ++IK G  LD  +   LI+ + KF     A +       R+++++N++ISG   F +
Sbjct: 53  IHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISG---FSE 109

Query: 62  SGPALKLFDRL-----RYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           +G +   FD L       +GL PD  T  +++  C     +Q    +HG+ +KLG S  V
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDV 169

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-S 172
            + +  ++ Y+K G +  A+M F      + V++  M+ G    G   ++  +F EM+  
Sbjct: 170 RVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQ 229

Query: 173 LGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +E+NE ++  +L A  ++   +  +++HG+ ++ GF       + N  +  Y +CG  
Sbjct: 230 EDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYD--ELVANGFVAAYAKCGML 287

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           + A ++F  +    V SW+  I   A   D  +A  L+  + ++    + +T+ +LL + 
Sbjct: 288 ICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLAS 347

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
              + LR GK++  F  + G      IG +L+S+Y  CG+ + AR +FD +  K SVSWN
Sbjct: 348 AHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWN 407

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI+GYS+NG    AL +F  ++     P+   + S+L A S   +L+   + H + +K+
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467

Query: 407 GFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             L++D  ++C  I  Y K   + ES+ V   +  K+    NA+ +         E++EL
Sbjct: 468 -LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIEL 526

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-------KAIHCLALKARYDQDIFVESA 518
           +  +    +  +G TF  +L  C+    +E+G       +  H +  K  +       + 
Sbjct: 527 FERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEH------YAC 580

Query: 519 VIDMYCKCGTIEDAKR 534
           V+DM  + G ++DA R
Sbjct: 581 VMDMLGRAGRLDDALR 596



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 208/439 (47%), Gaps = 27/439 (6%)

Query: 256 DGVEAF-GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           D ++ F  L  D  FN    + +T   ++ +  G      G+ I     K+G +  V +G
Sbjct: 13  DAIDMFVKLITDTEFN---ADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVG 69

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML--EFS 372
           NALI+MYGK G V+ A  +F Y+  ++ VSWNS+I+G+SENGF     DM   M+  E  
Sbjct: 70  NALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG 129

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           L+P+  T+ ++L   +    ++  +++H   +K G   D  + + L+  Y KC  L E++
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGSTFSIVLKACAAM 491
            +  + ++KNAV  N +   L       EA  L+R +      EVN  T   +L AC  +
Sbjct: 190 MLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEI 249

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           + L   K +H  +++  +  D  V +  +  Y KCG +  A+R F  +   ++  WNA++
Sbjct: 250 SQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G AQ+G   +  NL+ +M+  G+ PD  T  ++L +  H   +R  +       ++HG 
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGK-------EVHGF 362

Query: 612 IPQLEHYACIVDLLG--------RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           +  L H   I   +G          G    A++  D M        W +++S  +  G  
Sbjct: 363 V--LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVS-WNAMISGYSQNGLP 419

Query: 664 DLGLLAGSKLLE--LQPDN 680
           +  L+   KL+    QP +
Sbjct: 420 EDALILFRKLVSDGFQPSD 438



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 177/364 (48%), Gaps = 19/364 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   I++G   D +++   ++ + K      A R  +  + + + ++NALI G A+  
Sbjct: 257 ELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNG 316

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL L+ ++ Y GL PD FT  SL+ A     SL+  + VHG  L+ G     ++  
Sbjct: 317 DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGI 376

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y   GE  SA + F    +  +V++ AM+ GY  NG  + +  +F ++ S G + 
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ ++ +VLGA      ++ G++ H + +K   +  V   +  + +++Y + G   ++  
Sbjct: 437 SDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDV--FVACSTIDMYAKSGCIKESRS 494

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   D+ SW+  IAA     DG E+  LF+ +R      + +T I +L+      +
Sbjct: 495 VFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGL 554

Query: 292 LRAG----KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWN 346
           +  G     ++Q F    G    +     ++ M G+ G+++DA R + +     DS  W+
Sbjct: 555 VEEGLKYFNEMQNFH---GIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWS 611

Query: 347 SMIA 350
           S+++
Sbjct: 612 SLLS 615


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/753 (32%), Positives = 400/753 (53%), Gaps = 47/753 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  I +G      +   LI  + K      A +   + + RD +++ A+ISGL++  
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ LF ++              ++ AC  ++  E    +HG+ LK GFSS  Y+ +
Sbjct: 245 YEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCN 290

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y++SG + SAE  F      D V+Y +++ G    G  +++  +F +M     + 
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A   V     G+Q H + +K G  S +   +  ++++LYV+C     A +
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV--VEGSLLDLYVKCSDIKTAHE 408

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            F    + D ++            ++F +F  ++      N++T  ++L +         
Sbjct: 409 FFLCYGQLDNLN------------KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDL 456

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+QI     K GF   V + + LI MY K G+++ A  IF  L   D VSW +MIAGY++
Sbjct: 457 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQ 516

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +  F +AL++F  M +  +  +    AS + A +  ++L Q  Q+H+    SG+  D S+
Sbjct: 517 HDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSI 576

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L++ Y +C  + E+     +I  K+ V  N+L S    +    EAL ++  +  +  
Sbjct: 577 GNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGL 636

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E+N  TF   + A A + ++  GK IH +  K  YD +  V +A+I +Y KCGTI+D   
Sbjct: 637 EINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDI-- 694

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
                       WN+M+ GY+QHGC  E   LF  M +  V P+ +T++ VL++C H GL
Sbjct: 695 -----------SWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGL 743

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E  +Y   MS+ H L+P+ EHYAC+VDLLGR GLL  AK  +++MPI PDA +W++LL
Sbjct: 744 VDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLL 803

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           SAC ++ NID+G  A S LLEL+P + +TYVL+SN+YA +G W+   + R+ MK++ + K
Sbjct: 804 SACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKK 863

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           EPG SW+ V    H F+AGD +H ++  IY+ L
Sbjct: 864 EPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYL 896



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 182/384 (47%), Gaps = 43/384 (11%)

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSW--------SERIAAACDGVEAFGLFKDLRFN 270
           +++ Y+  G    AV +FDE+    +  W        +ER+     G     LF+ +   
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPG-----LFRRMLTK 157

Query: 271 DFQINEYTMINLLSSVGGERI-LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           + + +E     +L    G  +  R  +QI A     GF     I N LI +Y K G ++ 
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A+ +F+ L  +DSVSW +MI+G S+NG+  +A+ +FC +              +L A + 
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTK 263

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
            +  +   Q+H  ++K GF  +  + + L+T Y +   L+ ++++   + +++ V  N+L
Sbjct: 264 VEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSL 323

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S L        AL L++ +   C++ +  T + +L ACA++  L  GK  H  A+KA  
Sbjct: 324 ISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             DI VE +++D+Y KC  I+ A   F  +C             Y Q    ++   +F +
Sbjct: 384 TSDIVVEGSLLDLYVKCSDIKTAHEFF--LC-------------YGQLDNLNKSFQIFTQ 428

Query: 570 MSKFGVKPDEITYLAVLTSCCHAG 593
           M   G+ P++ TY ++L +C   G
Sbjct: 429 MQIEGIVPNQFTYPSILKTCTTLG 452



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 190/437 (43%), Gaps = 40/437 (9%)

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           G  LI  Y   G +N A ++FD +  +    WN +   +       +   +F  ML  ++
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 374 IPNGYTMASILEAVS-NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
             +    A +L   S N+ S +   Q+H+  I SGF     + + LI  Y K   L+ +K
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           +V   +  +++V   A+ S L       EA+ L+      C+        IVL AC  + 
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLF------CQ--------IVLSACTKVE 265

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
             E GK +H L LK  +  + +V +A++ +Y + G +  A++ F  + +     +N+++ 
Sbjct: 266 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 325

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS------CMS 606
           G AQ G  +    LF KM+    KPD +T  ++L++C   G +   + + S        S
Sbjct: 326 GLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385

Query: 607 DLHGLIPQLEHYACIVDL---------LGRVGLLEGAKMTIDQMPIP---PDAHIWQSLL 654
           D+      L+ Y    D+          G++  L  +     QM I    P+   + S+L
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSIL 445

Query: 655 SACTIYGNIDLGLLAGSKLLELQPD-NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
             CT  G  DLG    +++L+     N     +L ++YA  G  +   K+ + +KE  + 
Sbjct: 446 KTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVV 505

Query: 714 KEPGYSWIH-VGGYTHH 729
                SW   + GYT H
Sbjct: 506 -----SWTAMIAGYTQH 517


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/760 (31%), Positives = 403/760 (53%), Gaps = 12/760 (1%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            Q++  ++K G   D  + T L+  +        A +   +  + +++++ +L+ G +   
Sbjct: 867  QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
              G  L ++ R+R +G+  +  TF+++  +CG L++  +   V G  ++ GF   V + +
Sbjct: 927  NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 986

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I  ++    +  A   F    + D +++ AM+  Y  +G   +S   F  MR L  E 
Sbjct: 987  SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 1046

Query: 178  NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            N  +L+++L       ++K G  IHG  VK+G  S VC  + N ++ LY   G+  DA  
Sbjct: 1047 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVC--ICNTLLTLYSEAGRSEDAEL 1104

Query: 235  MFDEITEPDVVSWSERIAAAC-DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            +F  +TE D++SW+  +A    DG  ++   +  +L      +N  T  + L++      
Sbjct: 1105 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 1164

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L   K + A     GF + + +GNAL++MYGK G + +A+ +   +   D V+WN++I G
Sbjct: 1165 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 1224

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL-KQAMQVHSHIIKSGFLL 410
            ++EN   N+A+  +  + E  +  N  TM S+L A S    L K  M +H+HI+ +GF  
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 1284

Query: 411  DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
            DD + + LIT Y KC  LN S  +   +  K+ +  NA+ +   +  C  EAL+++  + 
Sbjct: 1285 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 1344

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 ++  +FS  L A A +  LE+G+ +H L +K  ++ D+ V +A +DMY KCG + 
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 1404

Query: 531  DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            D  +   +    S   WN ++  +A+HGC+ +    F++M K G KPD +T++++L++C 
Sbjct: 1405 DVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACN 1464

Query: 591  HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
            H GLV E   Y   M+   G+ P +EH  CI+DLLGR G L  A+  I +MP+PP+   W
Sbjct: 1465 HGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAW 1524

Query: 651  QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +SLL+AC I+GN++L       LLEL P ++S YVL SN+ A++G W DV  LRKEM   
Sbjct: 1525 RSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSN 1584

Query: 711  FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             + K+P  SW+ +    H F  G+  H Q+  I  +L +L
Sbjct: 1585 NIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGEL 1624



 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 182/534 (34%), Positives = 297/534 (55%), Gaps = 6/534 (1%)

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           K+G  IH   +  GF S +  HLN  ++  YV+ G  + A  +FD + E  VVSW+  ++
Sbjct: 47  KQGHLIHTHLITNGFGSDL--HLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVS 104

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                    +AF LF D+R    + N++T  + L +    R L  G Q+Q    K  F+E
Sbjct: 105 GYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVE 164

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + +AL+  + KCG++ DA  +F  ++ +D VSWN+MI GY+  GF + +  MF  ML
Sbjct: 165 NLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 224

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              L+P+ YT+ S+L A +    L  A Q+H  I + G+   D +   LI  Y K  +L 
Sbjct: 225 RGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLR 284

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVNGSTFSIVLKAC 488
            +K +   + KK+     AL +   +   ++ +AL+L++ +      ++      +L  C
Sbjct: 285 SAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC 344

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +     G  IH  ALK +   D+ + +A+IDMY K G IEDAKRAF ++   ++  W 
Sbjct: 345 ANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 404

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ GYA+HG  H   +L+ KM   G KP+++T+L++L +C H GL  E     + M + 
Sbjct: 405 SLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNK 464

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           + + P+ EHY+C+VDL  R GLLE A   + ++ I  +A +W ++L A +IYG + LG  
Sbjct: 465 YNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKE 524

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           A S L  +QP+N   YV+L+++Y++AG+W+D  K+RK M+E+   K  GYS+  
Sbjct: 525 AASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQ 578



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 195/693 (28%), Positives = 338/693 (48%), Gaps = 35/693 (5%)

Query: 18   STTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
            + TLI+ ++KF +   A R++FD  ++R+  +++ ++SG  R      A+ LF ++   G
Sbjct: 782  TNTLINMYSKFGNIEHA-RYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 840

Query: 77   LRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            + P+ F  +SL+ AC        E   VHG  +K G    VY+ +  +  Y   G + +A
Sbjct: 841  VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 900

Query: 133  EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE---FSLTAVLGAS 189
            +  F +  D + V++T+++ GY  +G   +   V+  MR  G+  N+    ++T+  G  
Sbjct: 901  QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 960

Query: 190  FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             D   G Q+ G  ++ GF   V   + N++++++       +A  +FD + E D++SW+ 
Sbjct: 961  EDQVLGYQVLGHIIQYGFEDSVS--VANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 1018

Query: 250  RIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
             I+A A  G+  E+   F  +R    + N  T+ +LLS       L+ G+ I     K+G
Sbjct: 1019 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 1078

Query: 307  FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
                V I N L+++Y + G+  DA  +F  +  +D +SWNSM+A Y ++G     L +  
Sbjct: 1079 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 1138

Query: 367  HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGK 424
             +L+   + N  T AS L A SN + L ++  VH+ II +GF   D +I  + L+T YGK
Sbjct: 1139 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF--HDFLIVGNALVTMYGK 1196

Query: 425  CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
               + E+K+VL  + + + V  NAL           EA++ Y+ I       N  T   V
Sbjct: 1197 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 1256

Query: 485  LKACAAMTD-LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            L AC+A  D L+ G  IH   +   ++ D +V++++I MY KCG +  +   F  +   S
Sbjct: 1257 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 1316

Query: 544  LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
               WNAM+   A HGC  E   +F +M   GV  D+ ++   L +  +  ++ E +    
Sbjct: 1317 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQ---- 1372

Query: 604  CMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
                LHGL+ +L   +        +D+ G+ G +      + Q PI      W  L+SA 
Sbjct: 1373 ---QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAF 1428

Query: 658  TIYGNIDLGLLAGSKLLEL--QPDNESTYVLLS 688
              +G          ++L+L  +PD+ +   LLS
Sbjct: 1429 ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 1461



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 248/497 (49%), Gaps = 9/497 (1%)

Query: 100  VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
            +H  C+    +  ++  +  I  Y+K G I  A   F +    +  +++ M+ GYV  G 
Sbjct: 766  LHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGL 825

Query: 160  FDKSKEVFVEMRSLGLELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHL 215
            ++++  +F +M  LG+E N F + +++ A     +   EG Q+HGF VK G L  V  ++
Sbjct: 826  YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV--YV 883

Query: 216  NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDF 272
              A+++ Y   G   +A K+F+E+ + +VVSW+  +    D     E   +++ +R    
Sbjct: 884  GTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 943

Query: 273  QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
              N+ T   + SS G       G Q+     + GF + VS+ N+LISM+     V +A  
Sbjct: 944  SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACY 1003

Query: 333  IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
            +FD++   D +SWN+MI+ Y+ +G   ++L  F  M       N  T++S+L   S+  +
Sbjct: 1004 VFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDN 1063

Query: 393  LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
            LK    +H  ++K G   +  + + L+T Y +     +++ V   + +++ +  N++ + 
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123

Query: 453  LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
             V      + L++   +    + +N  TF+  L AC+    L + K +H L + A +   
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183

Query: 513  IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            + V +A++ MY K G + +AK+  + + +     WNA++ G+A++   +E    +  + +
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243

Query: 573  FGVKPDEITYLAVLTSC 589
             G+  + IT ++VL +C
Sbjct: 1244 KGIPANYITMVSVLGAC 1260



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 242/477 (50%), Gaps = 19/477 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I++ LI NG   D  L+T LI  + K  D   A R +FD    R ++++ A++SG ++  
Sbjct: 52  IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAA-RNVFDGMPERSVVSWTAMVSGYSQNG 110

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A  LF  +R+ G++ + FT+ S ++AC SL+  ++   V G   K  F   +++ S
Sbjct: 111 RFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKS 170

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ ++K G++  A   F   ++ D V++ AM+ GY   G  D S  +F  M   GL  
Sbjct: 171 ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP 230

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + ++L +VL AS +   +    QIHG   ++G+  G  + +   ++N Y + G    A  
Sbjct: 231 DCYTLGSVLRASAEGGGLIIANQIHGIITQLGY--GSYDIVTGLLINAYAKNGSLRSAKD 288

Query: 235 MFDEITEPDVVSWSERIAA-ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +   + + D+ S +  I   A +G   V+A  LFK++   +  +++  + ++L+      
Sbjct: 289 LRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLA 348

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G QI AF  K      V++GNALI MY K G++ DA+  FD +  K+ +SW S+I+
Sbjct: 349 SFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLIS 408

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFL 409
           GY+++G+ + A+ ++  M      PN  T  S+L A S++    +  +  ++++ K    
Sbjct: 409 GYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIK 468

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINAL---ASVLVYASCHAEA 462
                 SC++  + +   L E+  +L +ID K NA    A+   +S+  Y S   EA
Sbjct: 469 PRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEA 525



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 141/570 (24%), Positives = 266/570 (46%), Gaps = 37/570 (6%)

Query: 52  LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG 108
           + S +   C  G   +    L     R D   +  +++ C    + ++  ++H   +  G
Sbjct: 1   MFSKIQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNG 60

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
           F S ++L +  I  Y K G++++A   F    +   V++TAMV GY  NG F+K+  +F 
Sbjct: 61  FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120

Query: 169 EMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +MR  G++ N+F+  + L A   ++    G Q+ G   K  F+  +   + +A+++ + +
Sbjct: 121 DMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENL--FVKSALVDFHSK 178

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINL 282
           CG+  DA  +F  + E DVVSW+  I   A  G   ++F +F+ +       + YT+ ++
Sbjct: 179 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSV 238

Query: 283 L--SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           L  S+ GG  I+    QI     ++G+     +   LI+ Y K G +  A+ +   ++ K
Sbjct: 239 LRASAEGGGLII--ANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKK 296

Query: 341 DSVSWNSMIAGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           D  S  ++I GY+  G ++  ALD+F  M + ++  +   + S+L   +N  S     Q+
Sbjct: 297 DLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQI 356

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H+  +K     D +M + LI  Y K   + ++KR   E+++KN +   +L S        
Sbjct: 357 HAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYG 416

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALKARYDQDIF 514
             A+ LY+ +     + N  TF  +L AC+      +G       ++   +K R +    
Sbjct: 417 HMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEH--- 473

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM-----MGYAQHGCYHEVSNLFN 568
             S ++D++ + G +E+A     KI  + + + W A++      GY   G     SNLFN
Sbjct: 474 -YSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLG-KEAASNLFN 531

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
              +     + + Y+ + +    AGL  +A
Sbjct: 532 MQPE-----NSVNYVVLASIYSAAGLWDDA 556



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 226/466 (48%), Gaps = 8/466 (1%)

Query: 195  GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
            G+ +H F +      G+     N ++N+Y + G    A  +FDE+   +  SWS  ++  
Sbjct: 763  GKALHAFCIVGSVNLGIFQ--TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 820

Query: 255  CD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR-AGKQIQAFCYKVGFMEV 310
               G+  EA GLF  +     + N + + +L+++      +   G Q+  F  K G +  
Sbjct: 821  VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 880

Query: 311  VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
            V +G AL+  YG  G V +A+ +F+ +   + VSW S++ GYS++G   + L+++  M +
Sbjct: 881  VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 940

Query: 371  FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
              +  N  T A++  +    +      QV  HII+ GF    S+ + LI+ +   +++ E
Sbjct: 941  EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 1000

Query: 431  SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
            +  V   +++ + +  NA+ S   +     E+L  +  +     E N +T S +L  C++
Sbjct: 1001 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 1060

Query: 491  MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
            + +L+ G+ IH L +K   D ++ + + ++ +Y + G  EDA+  F+ +    L  WN+M
Sbjct: 1061 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120

Query: 551  MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
            M  Y Q G   +   +  ++ + G   + +T+ + L +C +   + E++  +  +  + G
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI-VHALIIVAG 1179

Query: 611  LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
                L     +V + G++G++  AK  +  MP  PD   W +L+  
Sbjct: 1180 FHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 196/452 (43%), Gaps = 27/452 (5%)

Query: 250 RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
           +I +AC+        K L  N  +++    + +L     ++  + G  I       GF  
Sbjct: 4   KIQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGS 63

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + +   LI  Y K G V  AR++FD +  +  VSW +M++GYS+NG F +A  +F  M 
Sbjct: 64  DLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR 123

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              +  N +T  S L A ++ + L   +QV   I K  F+ +  + S L+  + KC  + 
Sbjct: 124 HCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKME 183

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           ++  +   + +++ V  NA+           ++  ++R++       +  T   VL+A A
Sbjct: 184 DASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 243

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
               L     IH +  +  Y     V   +I+ Y K G++  AK   + + +  L    A
Sbjct: 244 EGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTA 303

Query: 550 MMMGYAQHGCYH-EVSNLFNKMSKFGVKPDEITYLAVLTSCC-----------HAGLVRE 597
           ++ GYA  G Y  +  +LF +M++  +  D++   ++L  C            HA  ++ 
Sbjct: 304 LITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKY 363

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS-- 655
             +Y   M +             ++D+  + G +E AK   D+M    +   W SL+S  
Sbjct: 364 QPSYDVAMGN------------ALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGY 410

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
           A   YG++ + L    +    +P++ +   LL
Sbjct: 411 AKHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 442



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 1/207 (0%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L+  S   S      +H+  I     L     + LI  Y K   +  ++ V  E+  +N 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL-EQGKAIHC 502
              + + S  V    + EA+ L+  +WG   E NG   + ++ AC+    + ++G  +H 
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
             +K     D++V +A++  Y   G + +A++ F ++   ++  W ++M+GY+  G   E
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSC 589
           V N++ +M + GV  ++ T+  V +SC
Sbjct: 931 VLNVYQRMRQEGVSGNQNTFATVTSSC 957



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 5/180 (2%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           LK  + +T    GKA+H   +    +  IF  + +I+MY K G IE A+  F ++   + 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
           A W+ M+ GY + G Y E   LF +M   GV+P+     +++T+C  +G + +    +  
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI--WQSLLSACTIYGN 662
                G++  +     +V   G +GL+  A+   ++M   PD ++  W SL+   +  GN
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM---PDHNVVSWTSLMVGYSDSGN 927



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 48/91 (52%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  +K     D  +   LI  + K  +   A R   + + +++I++ +LISG A+  
Sbjct: 355 QIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHG 414

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A+ L+ ++  +G +P+  TF SL+ AC
Sbjct: 415 YGHMAVSLYKKMESKGFKPNDVTFLSLLFAC 445


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/764 (31%), Positives = 400/764 (52%), Gaps = 12/764 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ +++ G   D  LS  LI+ + K      A +   +   RD+I++N+LIS  A+  
Sbjct: 48  RIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQG 107

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A +LF+ ++  G  P+  T+ S++ AC S   L+  + +H   +K G+     + +
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G++  A   F      D V+Y  M+  Y       +   +F +M S G+  
Sbjct: 168 SLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISP 227

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   +L A      + EG++IH   V+ G  S +   +  A++ + VRCG    A +
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI--RVGTALVTMCVRCGDVDSAKQ 285

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F  I + DVV ++  IAA       VEAF  +  +R +   +N  T +++L++    + 
Sbjct: 286 AFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKA 345

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L AGK I +   + G    V IGNALISMY +CG +  AR +F  +  +D +SWN++IAG
Sbjct: 346 LEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAG 405

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+      +A+ ++  M    + P   T   +L A +NS +      +H  I++SG   +
Sbjct: 406 YARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSN 465

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y +C +L E++ V      ++ +  N++ +       +  A +L++ +  
Sbjct: 466 GHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQN 525

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              E +  TF+ VL  C     LE GK IH    ++    D+ + +A+I+MY +CG+++D
Sbjct: 526 EELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQD 585

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP-DEITYLAVLTSCC 590
           A+  F  +    +  W AM+ G A  G   +   LF +M   G +P D  T+ ++L++C 
Sbjct: 586 ARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACN 645

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGLV E     S M   +G++P +EHY C+V LLGR    + A+  I+QMP PPDA +W
Sbjct: 646 HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVW 705

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           ++LL AC I+GNI L   A +  L+L   N + Y+LLSN+YA+AG W+DV K+R+ M+ +
Sbjct: 706 ETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGR 765

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + KEPG SWI V    H F A D SH ++ EIY EL +L   M
Sbjct: 766 GIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEM 809



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/634 (24%), Positives = 296/634 (46%), Gaps = 56/634 (8%)

Query: 78  RP---DAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           RP   D  T+ +L++ C     L E + +H   ++ G    ++L +  I  Y K   ++ 
Sbjct: 21  RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF- 190
           A   F++    D +++ +++  Y   G   K+ ++F EM++ G   N+ +  ++L A + 
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140

Query: 191 --DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
             +++ G++IH   +K G+       + N+++++Y +CG    A ++F  I+  DVVS++
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDP--RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 249 ERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             +          E  GLF  +       ++ T INLL +     +L  GK+I     + 
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G    + +G AL++M  +CG V+ A+  F  +  +D V +N++IA  +++G   +A + +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M    +  N  T  SIL A S SK+L+    +HSHI + G   D  + + LI+ Y +C
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             L +++ +   + K++ +  NA+ +         EA+ LY+ +     +    TF  +L
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            ACA  +    GK IH   L++    +  + +A+++MY +CG++ +A+  F       + 
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVI 498

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA----------GLV 595
            WN+M+ G+AQHG Y     LF +M    ++PD IT+ +VL+ C +           G +
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRI 558

Query: 596 REA-------------RTYLSC--MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
            E+               Y+ C  + D   +   L+H     D++    ++ G     + 
Sbjct: 559 TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR----DVMSWTAMIGGCADQGED 614

Query: 641 MPI-------------PPDAHIWQSLLSACTIYG 661
           M               PPD   + S+LSAC   G
Sbjct: 615 MKAIELFWQMQNEGFRPPDGSTFTSILSACNHAG 648



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 254/503 (50%), Gaps = 11/503 (2%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           + E ++IH   V+ G    +   L+N ++N+YV+C   LDA ++F E+   DV+SW+  I
Sbjct: 43  LPEAKRIHAQMVEAGVGPDI--FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLI 100

Query: 252 AA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +  A  G +  AF LF++++   F  N+ T I++L++      L  GK+I +   K G+ 
Sbjct: 101 SCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQ 160

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + N+L+SMYGKCG +  AR +F  +  +D VS+N+M+  Y++  +  + L +F  M
Sbjct: 161 RDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               + P+  T  ++L+A +    L +  ++H   ++ G   D  + + L+T   +C  +
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           + +K+    I  ++ V  NAL + L     + EA E Y  +      +N +T+  +L AC
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           +    LE GK IH    +  +  D+ + +A+I MY +CG +  A+  F  + +  L  WN
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           A++ GYA+     E   L+ +M   GVKP  +T+L +L++C ++    + +     +  L
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI--L 458

Query: 609 HGLIPQLEHYA-CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG- 666
              I    H A  ++++  R G L  A+   +      D   W S+++    +G+ +   
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA-RDVISWNSMIAGHAQHGSYETAY 517

Query: 667 -LLAGSKLLELQPDNESTYVLLS 688
            L    +  EL+PDN +   +LS
Sbjct: 518 KLFQEMQNEELEPDNITFASVLS 540



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 145/284 (51%), Gaps = 2/284 (0%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  ++L+  +  + L +A ++H+ ++++G   D  + + LI  Y KC ++ ++ +V  E+
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            +++ +  N+L S         +A +L+  +  +    N  T+  +L AC +  +LE GK
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH   +KA Y +D  V+++++ MY KCG +  A++ F  I    +  +N M+  YAQ  
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              E   LF +MS  G+ PD++TY+ +L +     ++ E +  +  ++   GL   +   
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEEGLNSDIRVG 267

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             +V +  R G ++ AK     +    D  ++ +L++A   +G+
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGI-ADRDVVVYNALIAALAQHGH 310



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 7/241 (2%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E + +T+  +L+ C     L + K IH   ++A    DIF+ + +I+MY KC ++ DA +
Sbjct: 24  ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAG 593
            F+++ R  +  WN+++  YAQ G   +   LF +M   G  P++ITY+++LT+C   A 
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           L    + +   +   +   P++++   ++ + G+ G L  A+     +  P D   + ++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTM 200

Query: 654 LS--ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           L   A   Y    LGL        + PD + TY+ L + + +  M ++  ++ K   E+ 
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPD-KVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259

Query: 712 L 712
           L
Sbjct: 260 L 260


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 247/725 (34%), Positives = 400/725 (55%), Gaps = 18/725 (2%)

Query: 38  LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD T  + +   N L+   +R  Q+  AL LF  LR  G   D  + S ++K CG L +
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 97  NEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
             +   VH  C+K GF   V + +  ++ Y K+  +   E  F +    + V++T+++ G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSG 210
           Y  NG  +++ ++F +M+  G++ N F+  AVLG   A   V++G Q+H   +K G  S 
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
           +   + N+++N+Y +     DA  +FD +   + VSW+  IA    +G+  EAF LF  +
Sbjct: 228 I--FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           R    ++ +     ++      + +   KQ+     K G    ++I  AL+  Y KC ++
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345

Query: 328 NDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           +DA  +F  +   ++ VSW ++I+GY +NG  ++A+++FC M    + PN +T ++IL A
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                +     Q+H+ ++K+ +    S+ + L  +Y K    NE+ ++   ID+K+ V  
Sbjct: 406 ----NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAW 461

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLAL 505
           +A+ S          A++++  +     E N  TFS VL ACAA T  +EQGK  H  ++
Sbjct: 462 SAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSI 521

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+ +   + V SA++ MY K G IE A   F++     L  WN+M+ GYAQHGC  +   
Sbjct: 522 KSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLK 581

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           +F +M    ++ D IT++ V+++C HAGLV E + Y   M   + ++P +EHY+C+VDL 
Sbjct: 582 IFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLY 641

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
            R G+LE A   I++MP P  A IW++LL+AC ++ N+ LG LA  KL+ LQP + + YV
Sbjct: 642 SRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYV 701

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           LLSN+YA+AG W +  K+RK M  K + KE GYSWI V   T  F AGD SH QS  IY 
Sbjct: 702 LLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYL 761

Query: 746 ELIKL 750
           +L +L
Sbjct: 762 KLEEL 766



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 274/551 (49%), Gaps = 18/551 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   IK G   D  + T+L+  + K        R   + + ++++++ +L++G  +  
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
            +  ALKLF +++ +G++P+ FTF+++   + A G++++   VH + +K G  S +++ +
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+KS  +  A+  F    + + V++ +M+ G+V NG   ++ E+F  MR  G++L
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +     V+    ++KE    +Q+H   +K G  S    ++  A+M  Y +C +  DA K
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNG--SDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 235 MFDEITE-PDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F  +    +VVSW+  I+          A  LF  +R    + N +T   +L++     
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAA-- 408

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
              +  QI A   K  +    S+G AL   Y K G  N+A  IF+ +  KD V+W++M++
Sbjct: 409 --VSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFL 409
           GY++ G    A+ +F  + +  + PN +T +S+L A  + + S++Q  Q HS  IKSGF 
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS 526

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
               + S L+T Y K   +  +  V      ++ V  N++ S      C  ++L+++  +
Sbjct: 527 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 586

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-SAVIDMYCKCGT 528
                E++G TF  V+ AC     + +G+    L +K  +        S ++D+Y + G 
Sbjct: 587 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 646

Query: 529 IEDAKRAFRKI 539
           +E A     K+
Sbjct: 647 LEKAMDLINKM 657



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 137/262 (52%), Gaps = 8/262 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L++K  +   P + T L   ++K  D   A +       +DI+ ++A++SG A+  
Sbjct: 413 QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMG 472

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
               A+K+F +L  +G+ P+ FTFSS++ AC     S+++ +  H   +K GFS+ + + 
Sbjct: 473 DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVS 532

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  YAK G I SA   F+  +D D V++ +M+ GY  +G   KS ++F EMRS  LE
Sbjct: 533 SALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLE 592

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           L+  +   V+ A      V EG++     VK   +     H  + +++LY R G    A+
Sbjct: 593 LDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY-SCMVDLYSRAGMLEKAM 651

Query: 234 KMFDEITEPDVVSWSERIAAAC 255
            + +++  P   +    + AAC
Sbjct: 652 DLINKMPFPAGATIWRTLLAAC 673


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/674 (34%), Positives = 373/674 (55%), Gaps = 13/674 (1%)

Query: 94  LQENEIVHGVCLKLGFSSR--VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           L++ + VHG  LK  FS+   + L++     Y+K  +I +A   F      +  ++T ++
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFL 208
            G   NG F    E F EM+S G+  ++F+ + +L        ++ G  +H   V  GF 
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFK 265
           S     ++ A++N+Y +  +  D+ K+F+ +TE +VVSW+  I         ++AF LF 
Sbjct: 204 SHT--FVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFL 261

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +       +  T I +  ++G  R +   K++  +  ++G      +G ALI M  KCG
Sbjct: 262 RMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCG 321

Query: 326 QVNDARSIFD--YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
            + +ARSIF+  ++  + +  WN+MI+GY  +GF  +AL++F  M +  +  + YT  S+
Sbjct: 322 SLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSV 381

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKRVLSEIDKKN 442
             A++  K L    +VH+  IKSG  ++   IS  +   Y KC +L + ++V + ++ ++
Sbjct: 382 FNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRD 441

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +   +L +     S   +A+E++  +       N  TFS VL +CA +  LE G+ +H 
Sbjct: 442 LISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
           +  K   D D  +ESA++DMY KCG + DAK+ F +I       W A++ G+AQHG   +
Sbjct: 502 IICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              LF +M + GV+P+ +T+L VL +C H GLV E   Y   M   +GL+P++EHYACIV
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
           DLL RVG L  A   I +MP+ P+  +WQ+LL AC ++GN++LG LA  K+L  + +N +
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSA 681

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
           TYVLLSN Y  +G + D   LR  MKE+ + KEPG SWI V G  H FYAGD  H +  +
Sbjct: 682 TYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDK 741

Query: 743 IYKELIKLYEHMVA 756
           IY +L +L   +++
Sbjct: 742 IYAKLEELKLKLIS 755



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 269/547 (49%), Gaps = 19/547 (3%)

Query: 2   IYSLLIKN--GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++  L+K+   +H   +L   +   ++K +D   A R       R+  ++  LI+GLA  
Sbjct: 90  VHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAEN 149

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                  + F  ++ QG+ PD F +S +++ C    S++   +VH   +  GF+S  ++ 
Sbjct: 150 GLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVS 209

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK  EI  +   F    +++ V++ AM+ G+  N  +  + ++F+ M   G+ 
Sbjct: 210 TALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVT 269

Query: 177 LNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  +   V   +G   DV + +++ G+ +++G  S     +  A++++  +CG   +A 
Sbjct: 270 PDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL--VGTALIDMNSKCGSLQEAR 327

Query: 234 KMFDE--ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            +F+   IT      W+  I+         +A  LF  +  ND  ++ YT  ++ +++  
Sbjct: 328 SIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAA 387

Query: 289 ERILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            + L  GK++ A   K G  +  VSI NA+ + Y KCG + D R +F+ +  +D +SW S
Sbjct: 388 LKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTS 447

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           ++  YS+   +++A+++F +M    + PN +T +S+L + +N   L+   QVH  I K G
Sbjct: 448 LVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG 507

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             +D  + S L+  Y KC  L ++K+V + I   + V   A+ +         +AL+L+R
Sbjct: 508 LDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFR 567

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +     E N  TF  VL AC+    +E+G     L +K  Y     +E  + ++D+  +
Sbjct: 568 RMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL-MKKTYGLVPEMEHYACIVDLLSR 626

Query: 526 CGTIEDA 532
            G + DA
Sbjct: 627 VGHLNDA 633



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 135/264 (51%), Gaps = 15/264 (5%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGL 56
           ++++  IK+G  ++ + +S  + + + K     D R+ F  +   ++RD+I++ +L++  
Sbjct: 396 KVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM---EDRDLISWTSLVTAY 452

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRV 113
           ++  +   A+++F  +R +G+ P+ FTFSS++ +C +   L+  + VHG+  K+G     
Sbjct: 453 SQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDK 512

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + S  ++ YAK G +  A+  F    + D V++TA++ G+  +G  D + ++F  M  L
Sbjct: 513 CIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQL 572

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E N  +   VL A      V+EG Q      K   L     H    I++L  R G   
Sbjct: 573 GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHY-ACIVDLLSRVGHLN 631

Query: 231 DAVKMFDEI-TEPDVVSWSERIAA 253
           DA++    +  EP+ + W   + A
Sbjct: 632 DAMEFISRMPVEPNEMVWQTLLGA 655



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 5/220 (2%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSE 437
           +  +L    +++ LKQA  VH  ++KS F    S++  + +   Y KC+ ++ + R+  +
Sbjct: 71  LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + ++N      L + L       +  E +  +       +   +S +L+ C  +  +E G
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG 190

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             +H   +   +    FV +A+++MY K   IED+ + F  +   ++  WNAM+ G+  +
Sbjct: 191 NMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSN 250

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
             Y +  +LF +M   GV PD  T++ V  +    G++R+
Sbjct: 251 DLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAI---GMLRD 287


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/760 (31%), Positives = 403/760 (53%), Gaps = 12/760 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G   D  + T L+  +        A +   +  + +++++ +L+ G +   
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G  L ++ R+R +G+  +  TF+++  +CG L++  +   V G  ++ GF   V + +
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 336

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  ++    +  A   F    + D +++ AM+  Y  +G   +S   F  MR L  E 
Sbjct: 337 SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 396

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +L+++L       ++K G  IHG  VK+G  S VC  + N ++ LY   G+  DA  
Sbjct: 397 NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVC--ICNTLLTLYSEAGRSEDAEL 454

Query: 235 MFDEITEPDVVSWSERIAAAC-DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +TE D++SW+  +A    DG  ++   +  +L      +N  T  + L++      
Sbjct: 455 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 514

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   K + A     GF + + +GNAL++MYGK G + +A+ +   +   D V+WN++I G
Sbjct: 515 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 574

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL-KQAMQVHSHIIKSGFLL 410
           ++EN   N+A+  +  + E  +  N  TM S+L A S    L K  M +H+HI+ +GF  
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 634

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           DD + + LIT Y KC  LN S  +   +  K+ +  NA+ +   +  C  EAL+++  + 
Sbjct: 635 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 694

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                ++  +FS  L A A +  LE+G+ +H L +K  ++ D+ V +A +DMY KCG + 
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 754

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           D  +   +    S   WN ++  +A+HGC+ +    F++M K G KPD +T++++L++C 
Sbjct: 755 DVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACN 814

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV E   Y   M+   G+ P +EH  CI+DLLGR G L  A+  I +MP+PP+   W
Sbjct: 815 HGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAW 874

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLL+AC I+GN++L       LLEL P ++S YVL SN+ A++G W DV  LRKEM   
Sbjct: 875 RSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSN 934

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + K+P  SW+ +    H F  G+  H Q+  I  +L +L
Sbjct: 935 NIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGEL 974



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 195/693 (28%), Positives = 338/693 (48%), Gaps = 35/693 (5%)

Query: 18  STTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           + TLI+ ++KF +   A R++FD  ++R+  +++ ++SG  R      A+ LF ++   G
Sbjct: 132 TNTLINMYSKFGNIEHA-RYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 190

Query: 77  LRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           + P+ F  +SL+ AC        E   VHG  +K G    VY+ +  +  Y   G + +A
Sbjct: 191 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 250

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE---FSLTAVLGAS 189
           +  F +  D + V++T+++ GY  +G   +   V+  MR  G+  N+    ++T+  G  
Sbjct: 251 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 310

Query: 190 FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
            D   G Q+ G  ++ GF   V   + N++++++       +A  +FD + E D++SW+ 
Sbjct: 311 EDQVLGYQVLGHIIQYGFEDSVS--VANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 368

Query: 250 RIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I+A A  G+  E+   F  +R    + N  T+ +LLS       L+ G+ I     K+G
Sbjct: 369 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 428

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               V I N L+++Y + G+  DA  +F  +  +D +SWNSM+A Y ++G     L +  
Sbjct: 429 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 488

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGK 424
            +L+   + N  T AS L A SN + L ++  VH+ II +GF   D +I  + L+T YGK
Sbjct: 489 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF--HDFLIVGNALVTMYGK 546

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
              + E+K+VL  + + + V  NAL           EA++ Y+ I       N  T   V
Sbjct: 547 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 606

Query: 485 LKACAAMTD-LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           L AC+A  D L+ G  IH   +   ++ D +V++++I MY KCG +  +   F  +   S
Sbjct: 607 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 666

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
              WNAM+   A HGC  E   +F +M   GV  D+ ++   L +  +  ++ E +    
Sbjct: 667 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQ---- 722

Query: 604 CMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
               LHGL+ +L   +        +D+ G+ G +      + Q PI      W  L+SA 
Sbjct: 723 ---QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAF 778

Query: 658 TIYGNIDLGLLAGSKLLEL--QPDNESTYVLLS 688
             +G          ++L+L  +PD+ +   LLS
Sbjct: 779 ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 811



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 248/497 (49%), Gaps = 9/497 (1%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H  C+    +  ++  +  I  Y+K G I  A   F +    +  +++ M+ GYV  G 
Sbjct: 116 LHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGL 175

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHL 215
           ++++  +F +M  LG+E N F + +++ A     +   EG Q+HGF VK G L  V  ++
Sbjct: 176 YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV--YV 233

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDF 272
             A+++ Y   G   +A K+F+E+ + +VVSW+  +    D     E   +++ +R    
Sbjct: 234 GTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 293

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             N+ T   + SS G       G Q+     + GF + VS+ N+LISM+     V +A  
Sbjct: 294 SGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACY 353

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +FD++   D +SWN+MI+ Y+ +G   ++L  F  M       N  T++S+L   S+  +
Sbjct: 354 VFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDN 413

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           LK    +H  ++K G   +  + + L+T Y +     +++ V   + +++ +  N++ + 
Sbjct: 414 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 473

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V      + L++   +    + +N  TF+  L AC+    L + K +H L + A +   
Sbjct: 474 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 533

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V +A++ MY K G + +AK+  + + +     WNA++ G+A++   +E    +  + +
Sbjct: 534 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593

Query: 573 FGVKPDEITYLAVLTSC 589
            G+  + IT ++VL +C
Sbjct: 594 KGIPANYITMVSVLGAC 610



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 226/464 (48%), Gaps = 8/464 (1%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+ +H F +      G+     N ++N+Y + G    A  +FDE+   +  SWS  ++  
Sbjct: 113 GKALHAFCIVGSVNLGIFQ--TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 170

Query: 255 CD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR-AGKQIQAFCYKVGFMEV 310
              G+  EA GLF  +     + N + + +L+++      +   G Q+  F  K G +  
Sbjct: 171 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 230

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V +G AL+  YG  G V +A+ +F+ +   + VSW S++ GYS++G   + L+++  M +
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 290

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             +  N  T A++  +    +      QV  HII+ GF    S+ + LI+ +   +++ E
Sbjct: 291 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 350

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +  V   +++ + +  NA+ S   +     E+L  +  +     E N +T S +L  C++
Sbjct: 351 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 410

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + +L+ G+ IH L +K   D ++ + + ++ +Y + G  EDA+  F+ +    L  WN+M
Sbjct: 411 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           M  Y Q G   +   +  ++ + G   + +T+ + L +C +   + E++  +  +  + G
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKI-VHALIIVAG 529

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
               L     +V + G++G++  AK  +  MP  PD   W +L+
Sbjct: 530 FHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 572



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 1/207 (0%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L+  S   S      +H+  I     L     + LI  Y K   +  ++ V  E+  +N 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL-EQGKAIHC 502
              + + S  V    + EA+ L+  +WG   E NG   + ++ AC+    + ++G  +H 
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
             +K     D++V +A++  Y   G + +A++ F ++   ++  W ++M+GY+  G   E
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSC 589
           V N++ +M + GV  ++ T+  V +SC
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSC 307



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 5/180 (2%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           LK  + +T    GKA+H   +    +  IF  + +I+MY K G IE A+  F ++   + 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
           A W+ M+ GY + G Y E   LF +M   GV+P+     +++T+C  +G + +    +  
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI--WQSLLSACTIYGN 662
                G++  +     +V   G +GL+  A+   ++M   PD ++  W SL+   +  GN
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM---PDHNVVSWTSLMVGYSDSGN 277


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/674 (34%), Positives = 373/674 (55%), Gaps = 13/674 (1%)

Query: 94  LQENEIVHGVCLKLGFSSR--VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           L++ + VHG  LK  FS+   + L++     Y+K  +I +A   F      +  ++T ++
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFL 208
            G   NG F    E F EM+S G+  ++F+ + +L        ++ G  +H   V  GF 
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFK 265
           S     ++ A++N+Y +  +  D+ K+F+ +TE +VVSW+  I         ++AF LF 
Sbjct: 204 SHT--FVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFL 261

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +       +  T I +  ++G  R +   K++  +  ++G      +G ALI M  KCG
Sbjct: 262 RMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCG 321

Query: 326 QVNDARSIFD--YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
            + +ARSIF+  ++  + +  WN+MI+GY  +GF  +AL++F  M +  +  + YT  S+
Sbjct: 322 SLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSV 381

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKRVLSEIDKKN 442
             A++  K L    +VH+  IKSG  ++   IS  +   Y KC +L + ++V + ++ ++
Sbjct: 382 FNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRD 441

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +   +L +     S   +A+E++  +       N  TFS VL +CA +  LE G+ +H 
Sbjct: 442 LISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
           +  K   D D  +ESA++DMY KCG + DAK+ F +I       W A++ G+AQHG   +
Sbjct: 502 IICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              LF +M + GV+P+ +T+L VL +C H GLV E   Y   M   +GL+P++EHYACIV
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
           DLL RVG L  A   I +MP+ P+  +WQ+LL AC ++GN++LG LA  K+L  + +N +
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSA 681

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
           TYVLLSN Y  +G + D   LR  MKE+ + KEPG SWI V G  H FYAGD  H +  +
Sbjct: 682 TYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDK 741

Query: 743 IYKELIKLYEHMVA 756
           IY +L +L   +++
Sbjct: 742 IYAKLEELKLKLIS 755



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 269/547 (49%), Gaps = 19/547 (3%)

Query: 2   IYSLLIKN--GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++  L+K+   +H   +L   +   ++K +D   A R       R+  ++  LI+GLA  
Sbjct: 90  VHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAEN 149

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                  + F  ++ QG+ PD F +S +++ C    S++   +VH   +  GF+S  ++ 
Sbjct: 150 GLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVS 209

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK  EI  +   F    +++ V++ AM+ G+  N  +  + ++F+ M   G+ 
Sbjct: 210 TALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVT 269

Query: 177 LNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  +   V   +G   DV + +++ G+ +++G  S     +  A++++  +CG   +A 
Sbjct: 270 PDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTL--VGTALIDMNSKCGSLQEAR 327

Query: 234 KMFDE--ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            +F+   IT      W+  I+         +A  LF  +  ND  ++ YT  ++ +++  
Sbjct: 328 SIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAA 387

Query: 289 ERILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            + L  GK++ A   K G  +  VSI NA+ + Y KCG + D R +F+ +  +D +SW S
Sbjct: 388 LKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTS 447

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           ++  YS+   +++A+++F +M    + PN +T +S+L + +N   L+   QVH  I K G
Sbjct: 448 LVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG 507

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             +D  + S L+  Y KC  L ++K+V + I   + V   A+ +         +AL+L+R
Sbjct: 508 LDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFR 567

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +     E N  TF  VL AC+    +E+G     L +K  Y     +E  + ++D+  +
Sbjct: 568 RMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL-MKKTYGLVPEMEHYACIVDLLSR 626

Query: 526 CGTIEDA 532
            G + DA
Sbjct: 627 VGHLNDA 633



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 135/264 (51%), Gaps = 15/264 (5%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGL 56
           ++++  IK+G  ++ + +S  + + + K     D R+ F  +   ++RD+I++ +L++  
Sbjct: 396 KVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM---EDRDLISWTSLVTAY 452

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRV 113
           ++  +   A+++F  +R +G+ P+ FTFSS++ +C +   L+  + VHG+  K+G     
Sbjct: 453 SQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDK 512

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + S  ++ YAK G +  A+  F    + D V++TA++ G+  +G  D + ++F  M  L
Sbjct: 513 CIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQL 572

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E N  +   VL A      V+EG Q      K   L     H    I++L  R G   
Sbjct: 573 GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHY-ACIVDLLSRVGHLN 631

Query: 231 DAVKMFDEI-TEPDVVSWSERIAA 253
           DA++    +  EP+ + W   + A
Sbjct: 632 DAMEFISRMPVEPNEMVWQTLLGA 655



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 5/220 (2%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSE 437
           +  +L    +++ LKQA  VH  ++KS F    S++  + +   Y KC+ ++ + R+  +
Sbjct: 71  LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + ++N      L + L       +  E +  +       +   +S +L+ C  +  +E G
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG 190

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             +H   +   +    FV +A+++MY K   IED+ + F  +   ++  WNAM+ G+  +
Sbjct: 191 NMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSN 250

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
             Y +  +LF +M   GV PD  T++ V  +    G++R+
Sbjct: 251 DLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAI---GMLRD 287


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/792 (29%), Positives = 421/792 (53%), Gaps = 44/792 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ S ++K G + +  +   L+  + +F     A   L + +   ++T+NA+I+G  +  
Sbjct: 196 QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKIL 255

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
               A  +FDR+   G+ PD FTF+S ++ CG+L+  +    VH   +  GF    ++ +
Sbjct: 256 SWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN 315

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK  +  S    F +  + + V + +++      G F+ +  +F+ M+  G + 
Sbjct: 316 ALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N F+L ++L AS    D+ +G ++HG  V+    S +   L +A++++Y +CG   +A +
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII--LGSALVDMYSKCGMVEEAHQ 433

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFND-FQINEYTMINLLSSVGGER 290
           +F  + E + VS++  +A         EA  L+ D++  D  Q +++T   LL+    +R
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G+QI A   +    + + +   L+ MY +CG++N A+ IF+ +  +++ SWNSMI 
Sbjct: 494 NDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIE 553

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY +NG   +AL +F  M    + P+ ++++S+L +  +    ++  ++H+ I+++    
Sbjct: 554 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 613

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY---- 466
           +  +   L+  Y KC +++ + +V  +  KK+ +  N + S  V +    +A  L+    
Sbjct: 614 EGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME 673

Query: 467 ---RTIWGSCR------------------------EVNGSTFSIVLKACAAMTDLEQGKA 499
                +W S                          E +  T   ++  C+++  LE G  
Sbjct: 674 QRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQ 733

Query: 500 IHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           +H L +K  + +  + +E+A++DMY KCG I  A+  F  +   ++  WNAM+ GY++HG
Sbjct: 734 LHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHG 793

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
           C  E   L+ +M K G+ P+E+T+LA+L++C H GLV E     + M + + +  + EHY
Sbjct: 794 CSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHY 853

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
            C+VDLLGR G LE AK  +++MPI P+   W +LL AC ++ ++D+G LA  +L EL P
Sbjct: 854 TCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDP 913

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
            N   YV++SN+YA+AG W +V  +R+ MK K + K+PG SWI +      F+AG  +H 
Sbjct: 914 QNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHP 973

Query: 739 QSKEIYKELIKL 750
           +++EIY  L  L
Sbjct: 974 KTEEIYNNLRHL 985



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 173/770 (22%), Positives = 363/770 (47%), Gaps = 78/770 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           I++ +I NG++ D  L T ++  + +     D   A +   +   R++  +N +I   AR
Sbjct: 93  IHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYAR 152

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV---CLKLGFSSRVYL 115
                  L+L+ R+R  G   D FTF S++KAC ++++   V  +    +K G +  +++
Sbjct: 153 VDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFV 212

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
               ++ YA+ G +  A     +      V + A++ GYV    ++++  +F  M  +G+
Sbjct: 213 GGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGV 272

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             + F+  + L   GA      G+Q+H   +  GF       + NA++++Y +C  +   
Sbjct: 273 CPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT--FVGNALIDMYAKCDDEESC 330

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-----LRFND--FQINEYTMINLLSS 285
           +K+FDE+ E + V+W+  I+A       FG F D     LR  +  ++ N + + ++L +
Sbjct: 331 LKVFDEMGERNQVTWNSIISAEAQ----FGHFNDALVLFLRMQESGYKSNRFNLGSILMA 386

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
             G   +  G+++     +      + +G+AL+ MY KCG V +A  +F  L+ ++ VS+
Sbjct: 387 SAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSY 446

Query: 346 NSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           N+++AGY + G   +AL+++  M  E  + P+ +T  ++L   +N ++  Q  Q+H+H+I
Sbjct: 447 NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           ++    +  + + L+  Y +C  LN +K + + + ++NA   N++           EAL 
Sbjct: 507 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 566

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L++ +  +  + +  + S +L +C +++D ++G+ +H   ++   +++  ++  ++DMY 
Sbjct: 567 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYA 626

Query: 525 KCGTIE-------------------------------DAKRAFRKICRDSLAGWNAMMMG 553
           KCG+++                               DAK  F ++ + + A WN+++ G
Sbjct: 627 KCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAG 686

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           YA  G   E  N F +M +  ++ D +T + ++  C     +            LH LI 
Sbjct: 687 YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHG-------DQLHSLII 739

Query: 614 QLEHYAC-------IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           +     C       +VD+  + G +  A+   D M    +   W +++S  + +G     
Sbjct: 740 KKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISGYSKHGCSKEA 798

Query: 667 LLAGSKLLELQPD-----NESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           L+    L E  P      NE T++ + +  +  G+  +  ++   M+E +
Sbjct: 799 LI----LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDY 844



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/581 (27%), Positives = 276/581 (47%), Gaps = 30/581 (5%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG---EIVSAE 133
           +   +SSL++ C    S Q  + +H   +  G++   YL++  +  YA+SG   ++  A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF--- 190
             F +  + +  A+  M+  Y    ++ +   ++  MR  G   ++F+  +V+ A     
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189

Query: 191 DVKEGEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
           D+    Q+    VK G     CN  +  A+++ Y R G   DAV   DEI    VV+W+ 
Sbjct: 190 DMGGVRQLQSSVVKAGL---NCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNA 246

Query: 250 RIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            IA     +   EA+G+F  +       + +T  + L   G  R    GKQ+ +     G
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACG 306

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F     +GNALI MY KC        +FD +  ++ V+WNS+I+  ++ G FN AL +F 
Sbjct: 307 FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFL 366

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M E     N + + SIL A +    + +  ++H H++++    D  + S L+  Y KC 
Sbjct: 367 RMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCG 426

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS-CREVNGSTFSIVL 485
            + E+ +V   + ++N V  NAL +  V      EALELY  +      + +  TF+ +L
Sbjct: 427 MVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLL 486

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
             CA   +  QG+ IH   ++A   ++I VE+ ++ MY +CG +  AK  F ++   +  
Sbjct: 487 TLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 546

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN+M+ GY Q+G   E   LF +M   G+KPD  +  ++L+SC      ++ R      
Sbjct: 547 SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR------ 600

Query: 606 SDLHGLIPQ--LEH----YACIVDLLGRVGLLEGAKMTIDQ 640
            +LH  I +  +E        +VD+  + G ++ A    DQ
Sbjct: 601 -ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQ 640



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 245/509 (48%), Gaps = 19/509 (3%)

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD---AVKMFDEITEPDVVSWSE 249
           + G+ IH   +  G+      +L   I+ LY R G   D   A K+F+E+ E ++ +W+ 
Sbjct: 88  QRGKSIHTQMISNGYNPDA--YLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNT 145

Query: 250 RIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I A     D +E   L+  +R +    +++T  +++ +      +   +Q+Q+   K G
Sbjct: 146 MILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAG 205

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               + +G AL+  Y + G ++DA +  D +     V+WN++IAGY +   + +A  +F 
Sbjct: 206 LNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFD 265

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            ML+  + P+ +T AS L      +S     QVHS +I  GF  D  + + LI  Y KC+
Sbjct: 266 RMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCD 325

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
                 +V  E+ ++N V  N++ S         +AL L+  +  S  + N      +L 
Sbjct: 326 DEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILM 385

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           A A + D+ +G+ +H   ++   + DI + SA++DMY KCG +E+A + FR +   +   
Sbjct: 386 ASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVS 445

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHA---GLVREARTYL 602
           +NA++ GY Q G   E   L++ M S+ G++PD+ T+  +LT C +       R+   +L
Sbjct: 446 YNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 505

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
              +    +I + E    +V +    G L  AK   ++M    +A+ W S++      G 
Sbjct: 506 IRANITKNIIVETE----LVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGE 560

Query: 663 ID--LGLLAGSKLLELQPDNESTYVLLSN 689
               L L    +L  ++PD  S   +LS+
Sbjct: 561 TQEALRLFKQMQLNGIKPDCFSLSSMLSS 589



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 10/173 (5%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED--- 531
           +VN   +S +++ C      ++GK+IH   +   Y+ D ++ + ++ +Y + G ++D   
Sbjct: 68  DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC- 590
           A++ F ++   +L  WN M++ YA+   Y EV  L+ +M   G   D+ T+ +V+ +C  
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187

Query: 591 --HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
               G VR+ ++ +       GL   L     +VD   R G ++ A  ++D++
Sbjct: 188 MEDMGGVRQLQSSVVKA----GLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/739 (32%), Positives = 393/739 (53%), Gaps = 13/739 (1%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL--RYQGLRPDAFTF 84
           +F D    F  L        + +N LI G     Q   A+  + ++        PDA T 
Sbjct: 85  RFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTL 144

Query: 85  SSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
             +VK+C   G++    +VH     +G ++ VY+ S  ++ YA +G + +A   F    +
Sbjct: 145 PYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE 204

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT---AVLGASFDVKEGEQI 198
            D V +  M+ G +  G+ D +  +F  MR+ G E N  +L    +V     D+  G Q+
Sbjct: 205 RDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQL 264

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG- 257
           H   VK G    V   + N ++ +Y +C    DA ++F+ + + D+V+W+  I+      
Sbjct: 265 HSLAVKCGLEPEVA--VANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNG 322

Query: 258 --VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
             VEAFGLF D++ +  + +  T+++LL ++     L+ GK++  +  +      V + +
Sbjct: 323 LFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVS 382

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           AL+ +Y KC  V  A++++D     D V  ++MI+GY  NG   +AL MF ++LE  + P
Sbjct: 383 ALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKP 442

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N  T+AS+L   ++  +L    Q+H +++++ +     + S L+  Y KC  L+ S  + 
Sbjct: 443 NAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIF 502

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            ++ +K+ V  N++ S         EAL+L+R +     + N  T S  L ACA++  + 
Sbjct: 503 LKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIY 562

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            GK IH + +K     DIF ESA+IDMY KCG +E A R F  +   +   WN+++  Y 
Sbjct: 563 YGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYG 622

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG   E  +L + M + G KPD +T+LA++++C HAGLV E      CM+  + + P++
Sbjct: 623 AHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRM 682

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EH+AC+VDL  R G L+ A   I  MP  PDA IW +LL AC ++ N++L  +A  +L +
Sbjct: 683 EHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           L P N   YVL+SN+ A AG W+ V K+R+ MK+  + K PGYSW+ V   +H F A D 
Sbjct: 743 LDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDK 802

Query: 736 SHSQSKEIYKELIKLYEHM 754
           SH +S++IY  L  L + +
Sbjct: 803 SHPESEDIYTSLKTLLQEL 821


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/751 (32%), Positives = 413/751 (54%), Gaps = 17/751 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           I+  +I +G   D  L+  LI+  +K +D     R +FD   ++++IT+++++S  ++  
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSK-SDRVDNARVVFDKMPHKNLITWSSMVSMYSQQG 107

Query: 61  QSGPALKLF-DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            S  AL +F D  R  G  P+ F  +S+++AC   G +++   +HG  ++ GF   VY+ 
Sbjct: 108 YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 167

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+K+G I  A + F    +   V +T ++ GY   G    S E+F +MR   + 
Sbjct: 168 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV 227

Query: 177 LNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            + + +++VL A     F ++ G+QIH + ++ G    V   + N +++ Y +C +    
Sbjct: 228 PDRYVVSSVLSACSMLEF-LEGGKQIHAYVLRRGTEMDVS--VVNVLIDFYTKCNRVKAG 284

Query: 233 VKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD++   +++SW+  I+         EA  LF ++    ++ + +   ++L+S G  
Sbjct: 285 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 344

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+Q+ A+  K        + N LI MY K   + DA+ +FD +  ++ +S+N+MI
Sbjct: 345 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 404

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GYS     ++AL++F  M      P+  T  S+L   ++  +L+ + Q+H  IIK G  
Sbjct: 405 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVS 464

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           LD    S LI  Y KC+ + +++ V  E+++K+ V  NA+         + EAL+LY T+
Sbjct: 465 LDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTL 524

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             S ++ N  TF+ ++ A + +  L  G+  H   +K   D   FV +A++DMY KCG+I
Sbjct: 525 QFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSI 584

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E+A++ F       +  WN+M+  +AQHG   E   +F +M K G++P+ +T++AVL++C
Sbjct: 585 EEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSAC 644

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAG V +   + + M    G+ P  EHYAC+V LLGR G L  AK  I++MPI P A +
Sbjct: 645 SHAGRVEDGLNHFNSMPGF-GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIV 703

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W+SLLSAC I GN++LG  A    +   P +  +Y+LLSN++AS GMW DV K+R  M  
Sbjct: 704 WRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDS 763

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
             + KEPG SWI V    + F A D++H ++
Sbjct: 764 SEVVKEPGRSWIEVNNKVNVFIARDTTHREA 794



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 260/509 (51%), Gaps = 17/509 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++  ++++G   D  + T+LI  ++K  +   A R +FD    +  +T+  +I+G  + 
Sbjct: 150 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIAGYTKC 208

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
            +S  +L+LF ++R   + PD +  SS++ AC     L+  + +H   L+ G    V +V
Sbjct: 209 GRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 268

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGL 175
           +  I+ Y K   + +    F   +  + +++T M+ GY+ N  FD ++ ++F EM  LG 
Sbjct: 269 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNS-FDWEAMKLFGEMNRLGW 327

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + + F+ T+VL   G+   +++G Q+H + +K    S     + N ++++Y +    +DA
Sbjct: 328 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESD--EFVKNGLIDMYAKSNLLIDA 385

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD + E +V+S++  I          EA  LF ++R   F  +  T ++LL      
Sbjct: 386 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASL 445

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   KQI     K G    +  G+ALI +Y KC  V DAR +F+ +  KD V WN+M 
Sbjct: 446 FALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMF 505

Query: 350 AGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            GY+++    +AL ++   L+FS   PN +T A+++ A SN  SL+   Q H+ ++K G 
Sbjct: 506 FGYTQHLENEEALKLYS-TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGL 564

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + + L+  Y KC ++ E++++ +    ++ V  N++ S         EAL ++R 
Sbjct: 565 DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFRE 624

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +     + N  TF  VL AC+    +E G
Sbjct: 625 MMKEGIQPNYVTFVAVLSACSHAGRVEDG 653



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 136/265 (51%), Gaps = 19/265 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+ L+IK G  LD    + LI  ++K +  + A R +F+  N +DI+ +NA+  G  + 
Sbjct: 453 QIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDA-RHVFEEMNEKDIVVWNAMFFGYTQH 511

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            ++  ALKL+  L++   +P+ FTF++L+ A     SL+  +  H   +K+G     ++ 
Sbjct: 512 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 571

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK G I  A   F   +  D V + +M+  +  +GE +++  +F EM   G++
Sbjct: 572 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 631

Query: 177 LNEFSLTAVLGA---SFDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            N  +  AVL A   +  V++G      + GFG+K G     C      +++L  R G+ 
Sbjct: 632 PNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYAC------VVSLLGRSGKL 685

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A +  +++  EP  + W   ++A
Sbjct: 686 FEAKEFIEKMPIEPAAIVWRSLLSA 710



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 20/221 (9%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F+ +L+   +   +   K IH   + +    D F+ + +I++  K   +++A+  F K+ 
Sbjct: 30  FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 89

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREAR 599
             +L  W++M+  Y+Q G   E   +F  +  K G  P+E    +V+ +C   G+V +  
Sbjct: 90  HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKG- 148

Query: 600 TYLSCMSDLHGLIPQ----LEHY--ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
                 + LHG + +     + Y    ++D   + G +E A++  DQ+     A  W ++
Sbjct: 149 ------AQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS-EKTAVTWTTI 201

Query: 654 LSACTIYGN--IDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
           ++  T  G   + L L A  +   + PD    YV+ S L A
Sbjct: 202 IAGYTKCGRSAVSLELFAQMRETNVVPDR---YVVSSVLSA 239


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/752 (31%), Positives = 408/752 (54%), Gaps = 18/752 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRL 72
           D +L+T +I+ ++       + R +FD   R ++  +NA++S   R      A+ +F  L
Sbjct: 33  DFVLNTRIITMYSMCGSPSDS-RMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 91

Query: 73  -RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
                 +PD FT   ++KAC  L +    +I+HG+  K+   S V++ +  I  Y K G 
Sbjct: 92  ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 151

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNG----EFDKSKEVFVEMRSLGLELNEF-SLT 183
           +  A   F    + + V++ +++CG+  NG     F+  +E+ V   S   ++    ++ 
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211

Query: 184 AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            V     D+++G  +HG  VK+G    +   +NN+++++Y +C    +A  +FD+  + +
Sbjct: 212 PVCAGEEDIEKGMAVHGLAVKLGLNEEL--MVNNSLIDMYSKCRFLSEAQLLFDKNDKKN 269

Query: 244 VVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQI 298
           +VSW+  I   A   D    F L + ++  D ++  +E+T++N+L        L++ K++
Sbjct: 270 IVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             + ++ G      + NA I+ Y +CG +  +  +FD +  K   SWN+++ GY++N   
Sbjct: 330 HGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDP 389

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +ALD++  M +  L P+ +T+ S+L A S  KSL    ++H   +++G  +D  +   L
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           ++ Y  C     ++ +   ++ ++ V  N + +         EA+ L+R +     +   
Sbjct: 450 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 509

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
                V  AC+ ++ L  GK +HC ALKA   +DIFV S++IDMY K G I  ++R F +
Sbjct: 510 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +    +A WN ++ GY  HG   E   LF KM + G+KPD+ T+  +L +C HAGLV + 
Sbjct: 570 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 629

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             Y + M +LH + P+LEHY C+VD+LGR G ++ A   I++MP  PD+ IW SLLS+C 
Sbjct: 630 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 689

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I+GN+ LG    +KLLEL+P+    YVL+SNL+A +G W+DV ++R  MK+  L K+ G 
Sbjct: 690 IHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 749

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           SWI VGG  H+F  GD    + +E+ +   +L
Sbjct: 750 SWIEVGGKVHNFLIGDEMLPELEEVRETWRRL 781



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 186/401 (46%), Gaps = 30/401 (7%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           ++G   + +++   I+ +T+      + R       + + ++NAL+ G A+      AL 
Sbjct: 335 RHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 394

Query: 68  LFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYA 124
           L+ ++   GL PD FT  SL+ AC    SL   E +HG  L+ G +   ++    +  Y 
Sbjct: 395 LYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYI 454

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
             G+  +A++ F        V++  M+ GY  NG  D++  +F +M S G++  E ++  
Sbjct: 455 CCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 514

Query: 185 VLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           V GA      ++ G+++H F +K      +   ++++I+++Y + G    + ++FD + E
Sbjct: 515 VCGACSQLSALRLGKELHCFALKAHLTEDI--FVSSSIIDMYAKGGCIGLSQRIFDRLRE 572

Query: 242 PDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV SW+  IA       G EA  LF+ +     + +++T   +L +     ++  G + 
Sbjct: 573 KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEY 632

Query: 299 QAFCYKVGFMEVVSIGN---------ALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSM 348
                   F +++++ N          ++ M G+ G+++DA R I +     DS  W+S+
Sbjct: 633 --------FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSL 684

Query: 349 IAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVS 388
           ++    +G       +   +LE     P  Y + S L A S
Sbjct: 685 LSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 725



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+   ++NG  +DP +  +L+S +        A + LFD  ++R ++++N +I+G ++ 
Sbjct: 429 EIHGFALRNGLAVDPFIGISLLSLYICCGK-PFAAQVLFDGMEHRSLVSWNVMIAGYSQN 487

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                A+ LF ++   G++P       +  AC  L    +   +H   LK   +  +++ 
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I+ YAK G I  ++  F    + D  ++  ++ GY  +G   ++ E+F +M  LGL+
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F+ T +L A      V++G +     + +  +     H    ++++  R G+  DA+
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY-TCVVDMLGRAGRIDDAL 666

Query: 234 KMFDEIT-EPDVVSWSERIAA 253
           ++ +E+  +PD   WS  +++
Sbjct: 667 RLIEEMPGDPDSRIWSSLLSS 687



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 87/168 (51%), Gaps = 15/168 (8%)

Query: 483 IVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           ++L+AC    D+E G+ +H  ++   ++  D  + + +I MY  CG+  D++  F K+ R
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREART 600
            +L  WNA++  Y ++  + +  ++F+++ S    KPD  T   V+ +C  AGL+     
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLD---- 116

Query: 601 YLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMP 642
            L     +HG+  +++  +       ++ + G+ GL+E A    + MP
Sbjct: 117 -LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP 163


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 235/753 (31%), Positives = 407/753 (54%), Gaps = 13/753 (1%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFD 70
           H D I   T+I  + +  +   A + LFDT   RD++++N+L+S       +  ++++F 
Sbjct: 69  HRDVISWNTMIFGYAEIGNMGFA-QSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           R+R   +  D  TFS ++KAC  +++  +   VH + +++GF + V   S  ++ Y+K  
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           ++  A   FR+  + + V ++A++ GYV N  F +  ++F +M  +G+ +++ +  +V  
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 188 ASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           +   +   K G Q+HG  +K  F     + +  A +++Y +C +  DA K+F+ +  P  
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDF--AYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305

Query: 245 VSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
            S++  I   A    G++A  +F+ L+      +E ++   L++    +    G Q+   
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K G    + + N ++ MYGKCG + +A +IFD +  +D+VSWN++IA + +N    + 
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L +F  ML  ++ P+ +T  S+++A +  ++L   M++H  I+KSG  LD  + S L+  
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDM 485

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           YGKC  L E++++   +++K  V  N++ S          A   +  +       +  T+
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTY 545

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL  CA M  +E GK IH   LK     D+++ S ++DMY KCG ++D++  F K  +
Sbjct: 546 ATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPK 605

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                W+AM+  YA HG   +   LF +M    VKP+   +++VL +C H G V +   Y
Sbjct: 606 RDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHY 665

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M   +GL P +EHY+C+VDLLGR   +  A   I+ M    D  IW++LLS C + G
Sbjct: 666 FQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQG 725

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N+++   A + LL+L P + S YVLL+N+YA+ GMW +V K+R  MK   L KEPG SWI
Sbjct: 726 NVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWI 785

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            V    H F  GD +H +S+EIY++   L + M
Sbjct: 786 EVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEM 818



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 147/544 (27%), Positives = 275/544 (50%), Gaps = 16/544 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L I+ G   D +  + L+  ++K      AFR   +   R+++ ++A+I+G  +  
Sbjct: 159 QVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQND 218

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    LKLF  +   G+     T++S+ ++C  L   ++   +HG  LK  F+    + +
Sbjct: 219 RFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGT 278

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +  A   F    +    +Y A++ GY    +  K+ E+F  ++   L  
Sbjct: 279 ATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSF 338

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+  L A   +K   EG Q+HG  VK G    +C  + N I+++Y +CG  ++A  
Sbjct: 339 DEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNIC--VANTILDMYGKCGALVEACT 396

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD++   D VSW+  IAA       V+   LF  +  +  + +++T  +++ +  G++ 
Sbjct: 397 IFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQA 456

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G +I     K G      +G+AL+ MYGKCG + +A  I D L  K +VSWNS+I+G
Sbjct: 457 LNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISG 516

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +S       A   F  MLE  +IP+ +T A++L+  +N  +++   Q+H+ I+K     D
Sbjct: 517 FSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSD 576

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y KC  + +S+ +  +  K++ V  +A+     Y     +A++L+  +  
Sbjct: 577 VYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQL 636

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA-LKARYDQDIFVE--SAVIDMYCKCGT 528
              + N + F  VL+ACA M  +++G  +H    +++ Y  D  +E  S ++D+  +   
Sbjct: 637 LNVKPNHTIFISVLRACAHMGYVDKG--LHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQ 694

Query: 529 IEDA 532
           + +A
Sbjct: 695 VNEA 698



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 166/664 (25%), Positives = 311/664 (46%), Gaps = 63/664 (9%)

Query: 82  FTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           FTFS +++ C +L+     +  H   +   F   +Y+ +  ++ Y KS  +  A   F  
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 139 CLDLDNVAYTAMVCGYV----------------------W---------NGEFDKSKEVF 167
               D +++  M+ GY                       W         NG   KS E+F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 168 VEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           V MRSL +  +  + + VL A   +++   G Q+H   +++GF + V     +A++++Y 
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVT--GSALVDMYS 184

Query: 225 RCGQKLD-AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
           +C +KLD A ++F E+ E ++V WS  IA        +E   LFKD+      +++ T  
Sbjct: 185 KC-KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++  S  G    + G Q+     K  F     IG A + MY KC +++DA  +F+ L   
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
              S+N++I GY+      +AL++F  +    L  +  +++  L A S  K   + +Q+H
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              +K G   +  + + ++  YGKC AL E+  +  ++++++AV  NA+ +         
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           + L L+ ++  S  E +  T+  V+KACA    L  G  IH   +K+    D FV SA++
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALV 483

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG + +A++   ++   +   WN+++ G++           F++M + GV PD  
Sbjct: 484 DMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEGA 634
           TY  VL  C +   +   +        +H  I +L  +      + +VD+  + G ++ +
Sbjct: 544 TYATVLDVCANMATIELGK-------QIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS 596

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYA 692
           ++  ++ P   D   W +++ A   +G+ +  + L    +LL ++P++    + +S L A
Sbjct: 597 RLMFEKTP-KRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHT---IFISVLRA 652

Query: 693 SAGM 696
            A M
Sbjct: 653 CAHM 656



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 47/419 (11%)

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           ++T  ++L      + L  GKQ  A      F+  + + N L+  Y K   +N A  +FD
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 336 YLIFKDSVSWNSMIAGYSE-------------------------------NGFFNQALDM 364
            +  +D +SWN+MI GY+E                               NG   +++++
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 365 FCHMLEFSLIPNGY-TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           F  M     IP+ Y T + +L+A S  +     +QVH   I+ GF  D    S L+  Y 
Sbjct: 126 FVRMRSLK-IPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  L+ + R+  E+ ++N V  +A+ +  V      E L+L++ +      V+ ST++ 
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           V ++CA ++  + G  +H  ALK+ +  D  + +A +DMY KC  + DA + F  +    
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
              +NA+++GYA+     +   +F  + +  +  DEI+    LT+C         + +L 
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTAC------SVIKGHLE 358

Query: 604 CMSDLHGLIPQ--LEHYAC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +  LHGL  +  L    C    I+D+ G+ G L  A    D M    DA  W ++++A
Sbjct: 359 GIQ-LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/412 (22%), Positives = 189/412 (45%), Gaps = 21/412 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L +K G   +  ++ T++  + K      A     D + RD +++NA+I+   +  
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNE 420

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    L LF  +    + PD FT+ S+VKAC   Q       +HG  +K G     ++ S
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS 480

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G ++ AE       +   V++ +++ G+    + + ++  F +M  +G+  
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+   VL    +   ++ G+QIH   +K+   S V  ++ + ++++Y +CG   D+  
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDV--YIASTLVDMYSKCGNMQDSRL 598

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           MF++  + D V+WS  I A      G +A  LF++++  + + N    I++L +      
Sbjct: 599 MFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGY 658

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G    Q      G    +   + ++ + G+  QVN+A  + + + F+ D V W +++
Sbjct: 659 VDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLL 718

Query: 350 AGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
           +     G    A   F  +L+        + L+ N Y    +   V+  +S+
Sbjct: 719 SNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSI 770


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 250/745 (33%), Positives = 412/745 (55%), Gaps = 17/745 (2%)

Query: 11  HHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLF 69
           H  D  L  TL+  ++K  + +   + LFDT  +R+++T+++++S   +   S  AL LF
Sbjct: 83  HQHDVFLVNTLLHAYSKM-NLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLF 141

Query: 70  DR-LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
            R +R    +P+ +  +S+V+AC   G+L +   +HG  +K GF   VY+ +  I+ YAK
Sbjct: 142 CRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAK 201

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G +  A + F        V +TA++ GY   G  + S ++F +MR   +  + + +++V
Sbjct: 202 RGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSV 261

Query: 186 LGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           L A     F ++ G+QIHG+ ++ GF   V   + N I++ Y++C +     K+F+ + +
Sbjct: 262 LSACSMLEF-LEGGKQIHGYVLRRGFDMDVS--VVNGIIDFYLKCHKVKTGRKLFNRLVD 318

Query: 242 PDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DVVSW+  IA         +A  LF ++    ++ + +   ++L+S G  + L+ G+Q+
Sbjct: 319 KDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQV 378

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
            A+  KV       + N LI MY KC  + +AR +FD +   + VS+N+MI GYS     
Sbjct: 379 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKL 438

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +ALD+F  M      P   T  S+L   S+   L+ + Q+H  IIK G  LD    S L
Sbjct: 439 VEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSAL 498

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y KC+ + +++ V  EI  ++ V  NA+ S       + E+L+LY+ +  S  + N 
Sbjct: 499 IDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNE 558

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            TF+ V+ A + +  L  G+  H   +K   D D FV ++++DMY KCG+IE++ +AF  
Sbjct: 559 FTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSS 618

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
             +  +A WN+M+  YAQHG   +   +F +M   GVKP+ +T++ +L++C HAGL+   
Sbjct: 619 TNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLG 678

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             +   MS   G+ P ++HYAC+V LLGR G +  AK  + +MPI P A +W+SLLSAC 
Sbjct: 679 FHHFESMSKF-GIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACR 737

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           + G+++LG  A    +   P +  +Y+LLSN++AS GMW  V  +R++M    + KEPG+
Sbjct: 738 VSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGW 797

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEI 743
           SWI V    H F A D++H  S  I
Sbjct: 798 SWIEVNNEVHRFIARDTAHRDSTLI 822



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 225/459 (49%), Gaps = 25/459 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +++ G  +D  +   +I  + K    +   +      ++D++++  +I+G  +  
Sbjct: 276 QIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNS 335

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
             G A+ LF  +  +G +PDAF  +S++ +CGS   LQ+   VH   +K+   +  ++ +
Sbjct: 336 FHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKN 395

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ YAK   + +A   F     ++ V+Y AM+ GY    +  ++ ++F EMR   L L
Sbjct: 396 GLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMR---LSL 452

Query: 178 NEFSLTAVL------GASFDVKEGEQIH----GFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           +  +L   +       + F ++   QIH     FGV +   +G      +A++++Y +C 
Sbjct: 453 SPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAG------SALIDVYSKCS 506

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
              DA  +F+EI + D+V W+   +      +  E+  L+KDL+ +  + NE+T   +++
Sbjct: 507 CVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIA 566

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +      LR G+Q      K+G  +   + N+L+ MY KCG + ++   F     +D   
Sbjct: 567 AASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIAC 626

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WNSMI+ Y+++G   +AL++F  M+   + PN  T   +L A S++  L         + 
Sbjct: 627 WNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMS 686

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           K G        +C+++  G+   + E+K  + ++  K A
Sbjct: 687 KFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPA 725



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           QI+ L+IK G  LD    + LI  ++K     D R  F  ++D   RDI+ +NA+ SG +
Sbjct: 478 QIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYD---RDIVVWNAMFSGYS 534

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           +  ++  +LKL+  L+   L+P+ FTF++++ A     SL+  +  H   +K+G     +
Sbjct: 535 QQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPF 594

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ YAK G I  +   F      D   + +M+  Y  +G+  K+ EVF  M   G
Sbjct: 595 VTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEG 654

Query: 175 LELNEFSLTAVLGA-------SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           ++ N  +   +L A              E +  FG++ G     C      +++L  R G
Sbjct: 655 VKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYAC------MVSLLGRAG 708

Query: 228 QKLDAVKMFDEIT-EPDVVSWSERIAA 253
           +  +A +   ++  +P  V W   ++A
Sbjct: 709 KIYEAKEFVKKMPIKPAAVVWRSLLSA 735


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 243/707 (34%), Positives = 374/707 (52%), Gaps = 11/707 (1%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGV 103
           + +N LI G +       AL  F R+    + PD +TF  ++KACG L      ++VH +
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL 202

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
              +GF   +++ S  I+ Y  +G I  A+  F +    D + +  M+ GYV NG+F+ +
Sbjct: 203 ARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
              F EMR+  ++ N  S   +L        V+ G Q+HG  ++ GF S     + N I+
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPT--VANTII 320

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEY 277
            +Y +CG   DA K+FD + + D V+W+  IA         EA  LFK +  +  +++  
Sbjct: 321 TMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSI 380

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  + L SV     L+  K++ ++  + G    V + +AL+ +Y K G V  A   F   
Sbjct: 381 TFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQN 440

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
              D     +MI+GY  NG   +AL++F  +++  ++PN  TMAS+L A +   SLK   
Sbjct: 441 TLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGK 500

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           ++H  I+K G      + S +   Y K   L+ + +    +  K++V  N +        
Sbjct: 501 ELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNG 560

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
               A++L+R +  S  + +  + S  L ACA    L  GK +HC  ++  +  D FV S
Sbjct: 561 KPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVAS 620

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            +IDMY KCG +  A+  F  +   +   WN+++  Y  HG   E  +LF++M + G++P
Sbjct: 621 TLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQP 680

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D +T+L ++++C HAGLV E   Y  CM++ +G+  ++EH+AC+VDL GR G L  A  T
Sbjct: 681 DHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDT 740

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           I  MP  PDA  W SLL AC ++GN++L  LA   L+EL P+N   YVLLSN++A AG W
Sbjct: 741 IKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEW 800

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
             V K+R  MKEK + K PGYSWI V G TH F A D  H QS EIY
Sbjct: 801 ESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIY 847



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 7/348 (2%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A     G    +++G+ ++ MY  C    D  ++F  L    S+ WN +I G+S  
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G F+ AL  F  ML  ++ P+ YT   +++A     ++     VH      GF +D  + 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S LI  Y     ++++K +  E+  ++ +  N + +  V       AL  ++ +  SC +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N  +F  +L  CA    +  G  +H L +++ ++ D  V + +I MY KCG + DA++ 
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  + +     WN ++ GY Q+G   E   LF  M   GVK D IT+ + L S   +G +
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395

Query: 596 ---REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
              +E  +Y+      HG+   +   + +VD+  + G +E A  T  Q
Sbjct: 396 KYCKEVHSYIV----RHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ 439



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 21/296 (7%)

Query: 380 MASILEAVSNSKS---LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
           + S+  A  NS +    +Q  Q+H+ ++  G     ++ S ++  Y  C +  +   +  
Sbjct: 76  LESMFRAFPNSDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFC 135

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +    ++  N L        C   AL  +  + GS    +  TF  V+KAC  + ++  
Sbjct: 136 RLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPL 195

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
            K +H LA    +  D+F+ S++I +Y   G I DAK  F ++       WN M+ GY +
Sbjct: 196 CKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVK 255

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI---- 612
           +G ++     F +M    VKP+ ++++ +L+ C   G+VR           LHGL+    
Sbjct: 256 NGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG-------IQLHGLVIRSG 308

Query: 613 ----PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
               P + +   I+ +  + G L  A+   D MP   D   W  L++     G  D
Sbjct: 309 FESDPTVAN--TIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQNGFTD 361


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/753 (31%), Positives = 407/753 (54%), Gaps = 17/753 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D I   T+I  +    +   A +FLFD+   RD++++N+++S   +      ++++F ++
Sbjct: 103 DVISWNTMIFGYAGVGNMEFA-QFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKM 161

Query: 73  RYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R   ++ D  TF+ ++KAC  +++  +   VH + +++GF S V   +  ++ Y+   ++
Sbjct: 162 RLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKL 221

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA- 188
             A   F +  + ++V ++A++ GYV N  F +  +++  M   G+ +++ +  +   + 
Sbjct: 222 DHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281

Query: 189 ----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
               +F++  G Q+H + +K  F  G  N +  A +++Y +C + +DA K+F+    P  
Sbjct: 282 AGLSAFEL--GTQLHAYALKTNF--GYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 245 VSWSERIA--AACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
            S +  I   A  D V EA  +F+ L+ +    +E ++   L++    +    G Q+   
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K G    + + N ++ MY KCG + +A  IFD +  KD+VSWN++IA + +N    + 
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L +F  ML  ++ P+ YT  S+++A +  K+L   M+VH  +IKSG  LD  + S +I  
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  L E++++   ++++  V  N++ S          AL  +  +       +  T+
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTY 577

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL  CA +  +E GK IH   LK +   D+++ S ++DMY KCG ++D++  F K  +
Sbjct: 578 ATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPK 637

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                W+AM+  YA HG   +   LF +M    VKP+   +++VL +C H G V +   Y
Sbjct: 638 RDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHY 697

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M   +GL PQ+EHY+C+VDLLGR G +  A   I+ MP   D  IW++LL  C + G
Sbjct: 698 FREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQG 757

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N+++   A + LL+L P + S YVLLSN+YA AGMW +V K+R  MK   L KEPG SWI
Sbjct: 758 NVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            V    H F  GD +H +S+EIY++   L + M
Sbjct: 818 QVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEM 850



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 271/544 (49%), Gaps = 16/544 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L I+ G   D +  T L+  ++       AF    +   R+ + ++A+I+G  R  
Sbjct: 191 QVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRND 250

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    LKL+  +  +G+     TF+S  ++C  L   E+   +H   LK  F     + +
Sbjct: 251 RFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGT 310

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +V A   F    +    ++ A++ GY    +  ++ E+F  ++   L+ 
Sbjct: 311 ATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDF 370

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+  L A   +K   EG Q+HG  VK G    +C  + N I+++Y +CG  ++A  
Sbjct: 371 DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNIC--VANTILDMYAKCGALMEACL 428

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD++   D VSW+  IAA        E   LF  +  +  + ++YT  +++ +  G++ 
Sbjct: 429 IFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKA 488

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G ++     K G      +G+A+I MY KCG + +A  I + L  + +VSWNS+I+G
Sbjct: 489 LNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISG 548

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +S       AL  F  ML+  +IP+ +T A++L+  +N  +++   Q+H  I+K     D
Sbjct: 549 FSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSD 608

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S ++  Y KC  + +S+ +  +  K++ V  +A+     Y     +A++L+  +  
Sbjct: 609 VYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQL 668

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGT 528
              + N + F  VL+ACA M  +++G  +H    +++ Y  D  +E  S ++D+  + G 
Sbjct: 669 QNVKPNHTIFISVLRACAHMGFVDKG--LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQ 726

Query: 529 IEDA 532
           + +A
Sbjct: 727 VNEA 730


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/753 (31%), Positives = 396/753 (52%), Gaps = 17/753 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFD 70
           D +   T+++ ++   D   A        + D++++NAL+SG   +CQ G    ++ LF 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG---YCQRGMFQESVDLFV 180

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
            +  +G+ PD  TF+ L+K+C +L+E  +   VH + +K G    V   S  ++ Y K  
Sbjct: 181 EMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR 240

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL- 186
            +  A   F    + + V++ A + G V N ++ +  E+F+EM+ LGL +++ S  +   
Sbjct: 241 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 300

Query: 187 --GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
              A   +  G Q+H   +K  F S     +  AI+++Y +     DA + F  +    V
Sbjct: 301 SCAAMSCLNTGRQLHAHAIKNKFSSD--RVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 358

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
            + +  +     A  G+EA GLF+ +  +  + +  ++  + S+    +    G+Q+   
Sbjct: 359 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 418

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K GF   + + NA++ +YGKC  + +A  IF  +  KDSVSWN++IA   +NG ++  
Sbjct: 419 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 478

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +  F  ML F + P+ +T  S+L+A +  +SL+  + VH  +IKSG   D  + S ++  
Sbjct: 479 ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 538

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  ++E++++   I  +  V  NA+ S         EA + +  +     + +  TF
Sbjct: 539 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 598

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL  CA +  +E GK IH   +K     D ++ S ++DMY KCG + D+   F K+ +
Sbjct: 599 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 658

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                WNAM+ GYA HG   E   +F +M K  V P+  T++AVL +C H GL  +   Y
Sbjct: 659 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 718

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M+  + L PQLEH+AC+VD+LGR    + A   I+ MP   DA IW++LLS C I  
Sbjct: 719 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 778

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           ++++  LA S +L L PD+ S Y+LLSN+YA +G W DV + R+ +K+  L KEPG SWI
Sbjct: 779 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 838

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            V    H F  GD +H +S E+Y+ L  L   M
Sbjct: 839 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 871



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 247/510 (48%), Gaps = 19/510 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G  +D    + L+  + K      A  F +    R+ +++ A I+G  +  
Sbjct: 212 QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNE 271

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L+LF  ++  GL     +++S  ++C +   L     +H   +K  FSS   + +
Sbjct: 272 QYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGT 331

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+  +  A   F    +       AM+ G V  G   ++  +F  M    +  
Sbjct: 332 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRF 391

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL+ V  A  + K   +G+Q+H   +K GF   +C  +NNA+++LY +C   ++A  
Sbjct: 392 DVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC--VNNAVLDLYGKCKALMEAYL 449

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKD--LRFND-----FQINEYTMINLLSSVG 287
           +F  + + D VSW+  IAA    +E  G + D  L FN+      + +++T  ++L +  
Sbjct: 450 IFQGMKQKDSVSWNAIIAA----LEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 505

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             R L  G  +     K G      + + ++ MY KCG +++A+ + D +  +  VSWN+
Sbjct: 506 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 565

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +++G+S N    +A   F  ML+  L P+ +T A++L+  +N  +++   Q+H  IIK  
Sbjct: 566 ILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 625

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            L D+ + S L+  Y KC  + +S  V  +++K++ V  NA+           EAL ++ 
Sbjct: 626 MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFE 685

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
            +       N +TF  VL+AC+ +   + G
Sbjct: 686 RMQKENVVPNHATFVAVLRACSHVGLFDDG 715



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 225/467 (48%), Gaps = 21/467 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++  IKN    D ++ T ++  + K     D RRAF   F   N  + T NA++ GL 
Sbjct: 313 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF---FGLPNHTVETSNAMMVGLV 369

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVY 114
           R      A+ LF  +    +R D  + S +  AC   +   + + VH + +K GF   + 
Sbjct: 370 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 429

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y K   ++ A + F+     D+V++ A++     NG +D +   F EM   G
Sbjct: 430 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFG 489

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ ++F+  +VL A   ++    G  +H   +K G   G    + + ++++Y +CG   +
Sbjct: 490 MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGL--GSDAFVASTVVDMYCKCGIIDE 547

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+ D I    VVSW+  ++      +  EA   F ++     + + +T   +L +   
Sbjct: 548 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 607

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  GKQI     K   ++   I + L+ MY KCG + D+  +F+ +  +D VSWN+M
Sbjct: 608 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 667

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY+ +G   +AL MF  M + +++PN  T  ++L A S+        + + H++ + +
Sbjct: 668 ICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR-YFHLMTTHY 726

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASV 452
            L+  +   +C++   G+     E+ + ++ +  + +AV    L S+
Sbjct: 727 KLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSI 773



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 35/408 (8%)

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM----------------- 348
           GF+    + N L+ MY +C     AR +FD +  +D+VSWN+M                 
Sbjct: 89  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148

Query: 349 --------------IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
                         ++GY + G F +++D+F  M    + P+  T A +L++ S  + L 
Sbjct: 149 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 208

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +QVH+  +K+G  +D    S L+  YGKC +L+++      + ++N V   A  +  V
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               +   LEL+  +      V+  +++   ++CAAM+ L  G+ +H  A+K ++  D  
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 328

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++D+Y K  ++ DA+RAF  +   ++   NAMM+G  + G   E   LF  M +  
Sbjct: 329 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 388

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++ D ++   V ++C       + +  + C++   G    +     ++DL G+   L  A
Sbjct: 389 IRFDVVSLSGVFSACAETKGYFQGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 447

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
            +    M    D+  W ++++A    G+ D  +L  +++L   ++PD+
Sbjct: 448 YLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDD 494


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 244/728 (33%), Positives = 398/728 (54%), Gaps = 19/728 (2%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIV 100
           R+++ +N +ISG A+      AL  F ++   G++    T +S++ A  SL       +V
Sbjct: 180 RNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLV 239

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   +K GF S +Y+ S  I  Y K      A   F      + + + AM+  Y  NG  
Sbjct: 240 HAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFL 299

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNN 217
               E+F++M S G+  +EF+ T++L   A F+  E G Q+H   +K  F S +   +NN
Sbjct: 300 SNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNL--FVNN 357

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGVEA--FGLFKDLRFNDFQI 274
           A++++Y + G   +A K F+ +T  D +SW+  I     + VEA  F LF+ +  +    
Sbjct: 358 ALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVP 417

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +E ++ ++LS+ G  ++L AG+Q      K+G    +  G++LI MY KCG + DA   +
Sbjct: 418 DEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTY 477

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +  +  VS N++IAGY+      +++++   M    L P+  T AS+++    S  + 
Sbjct: 478 SSMPERSVVSVNALIAGYALKNT-KESINLLHEMQILGLKPSEITFASLIDVCKGSAKVI 536

Query: 395 QAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDK-KNAVHINALASV 452
             +Q+H  I+K G L     + + L+  Y     L ++  + SE    K+ V   AL S 
Sbjct: 537 LGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISG 596

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            +   C   AL LYR +  +    + +TF  VL+ACA ++ L  G+ IH L     +D D
Sbjct: 597 HIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLD 656

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
               SA++DMY KCG ++ + + F ++  +  +  WN+M++G+A++G       +F++M+
Sbjct: 657 ELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMT 716

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
           +  + PD++T+L VLT+C HAG V E R     M + +G+ P+++HYAC+VDLLGR G L
Sbjct: 717 QSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFL 776

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A+  ID++ + P+A IW +LL AC I+G+   G  A  KL+EL+P + S YVLLSN+Y
Sbjct: 777 KEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMY 836

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A++G W++   LR+ M +K + K PG SWI VG  T+ F AGD SHS   EI K L    
Sbjct: 837 AASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKAL---- 892

Query: 752 EHMVATAK 759
           +H+ A  K
Sbjct: 893 KHLTALIK 900



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 258/551 (46%), Gaps = 47/551 (8%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCL 105
           +N  + G   +  S   L+ +      G  PD FTF+  + AC  LQ       VH   +
Sbjct: 16  WNWRVQGTKHY-SSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC--LDLDNVAYTAMVCGYVWNGEFDKS 163
           K G  S  +     I  YAK   +  A   F       L  V++TA++ GYV  G   ++
Sbjct: 75  KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             +F +MR+  +  ++ +L  VL                                  N Y
Sbjct: 135 LHIFDKMRNSAVP-DQVALVTVL----------------------------------NAY 159

Query: 224 VRCGQKLDAVKMFDEITEP--DVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYT 278
           +  G+  DA ++F ++  P  +VV+W+  I+         EA   F  +  +  + +  T
Sbjct: 160 ISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRST 219

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + ++LS++     L  G  + A   K GF   + + ++LI+MYGKC   +DAR +FD + 
Sbjct: 220 LASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAIS 279

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            K+ + WN+M+  YS+NGF +  +++F  M+   + P+ +T  SIL   +  + L+   Q
Sbjct: 280 QKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQ 339

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +HS IIK  F  +  + + LI  Y K  AL E+ +    +  ++ +  NA+    V    
Sbjct: 340 LHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEV 399

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
            A A  L+R +       +  + + +L AC  +  LE G+  HCL++K   + ++F  S+
Sbjct: 400 EAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSS 459

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +IDMY KCG I+DA + +  +   S+   NA++ GYA       + NL ++M   G+KP 
Sbjct: 460 LIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESI-NLLHEMQILGLKPS 518

Query: 579 EITYLAVLTSC 589
           EIT+ +++  C
Sbjct: 519 EITFASLIDVC 529



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 218/452 (48%), Gaps = 16/452 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +IK     +  ++  LI  + K    + A +       RD I++NA+I G  +  
Sbjct: 339 QLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEE 398

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A  LF R+   G+ PD  + +S++ ACG+   L+  +  H + +KLG  + ++  S
Sbjct: 399 VEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGS 458

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G+I  A   +    +   V+  A++ GY       +S  +  EM+ LGL+ 
Sbjct: 459 SLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNT-KESINLLHEMQILGLKP 517

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E    SL  V   S  V  G QIH   VK G L G    L  +++ +Y+   +  DA  
Sbjct: 518 SEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCG-SEFLGTSLLGMYMDSQRLADANI 576

Query: 235 MFDEITE-PDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F E +    +V W+  I+      C  V A  L++++R N+   ++ T + +L +    
Sbjct: 577 LFSEFSSLKSIVMWTALISGHIQNECSDV-ALNLYREMRDNNISPDQATFVTVLQACALL 635

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSM 348
             L  G++I +  +  GF       +AL+ MY KCG V  +  +F+ L   KD +SWNSM
Sbjct: 636 SSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSM 695

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SG 407
           I G+++NG+   AL +F  M +  + P+  T   +L A S++  + +  Q+   ++   G
Sbjct: 696 IVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYG 755

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEID 439
                   +C++   G+   L E++  + +++
Sbjct: 756 IEPRVDHYACMVDLLGRWGFLKEAEEFIDKLE 787



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 16/257 (6%)

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L+ Y +   S    +  TF++ L ACA + +L  G+A+H   +K+  +   F + A+I +
Sbjct: 32  LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91

Query: 523 YCKCGTIEDAKRAFRKICRDSL--AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           Y KC ++  A+  F       L    W A++ GY Q G  HE  ++F+KM    V PD++
Sbjct: 92  YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQV 150

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG--RVGLLEGAKMTI 638
             + VL +    G + +A      M      IP     A  V + G  +    E A    
Sbjct: 151 ALVTVLNAYISLGKLDDACQLFQQMP-----IPIRNVVAWNVMISGHAKTAHYEEALAFF 205

Query: 639 DQMP---IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL--LSNLYAS 693
            QM    +        S+LSA      ++ GLL  +  ++ Q    S YV   L N+Y  
Sbjct: 206 HQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIK-QGFESSIYVASSLINMYGK 264

Query: 694 AGMWNDVGKLRKEMKEK 710
             M +D  ++   + +K
Sbjct: 265 CQMPDDARQVFDAISQK 281


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/753 (31%), Positives = 396/753 (52%), Gaps = 17/753 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFD 70
           D +   T+++ ++   D   A        + D++++NAL+SG   +CQ G    ++ LF 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG---YCQRGMFQESVDLFV 138

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
            +  +G+ PD  TF+ L+K+C +L+E  +   VH + +K G    V   S  ++ Y K  
Sbjct: 139 EMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR 198

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL- 186
            +  A   F    + + V++ A + G V N ++ +  E+F+EM+ LGL +++ S  +   
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 258

Query: 187 --GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
              A   +  G Q+H   +K  F S     +  AI+++Y +     DA + F  +    V
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSD--RVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
            + +  +     A  G+EA GLF+ +  +  + +  ++  + S+    +    G+Q+   
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K GF   + + NA++ +YGKC  + +A  IF  +  KDSVSWN++IA   +NG ++  
Sbjct: 377 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 436

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +  F  ML F + P+ +T  S+L+A +  +SL+  + VH  +IKSG   D  + S ++  
Sbjct: 437 ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 496

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  ++E++++   I  +  V  NA+ S         EA + +  +     + +  TF
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL  CA +  +E GK IH   +K     D ++ S ++DMY KCG + D+   F K+ +
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 616

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                WNAM+ GYA HG   E   +F +M K  V P+  T++AVL +C H GL  +   Y
Sbjct: 617 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 676

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M+  + L PQLEH+AC+VD+LGR    + A   I+ MP   DA IW++LLS C I  
Sbjct: 677 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 736

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           ++++  LA S +L L PD+ S Y+LLSN+YA +G W DV + R+ +K+  L KEPG SWI
Sbjct: 737 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            V    H F  GD +H +S E+Y+ L  L   M
Sbjct: 797 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 829



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 247/510 (48%), Gaps = 19/510 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G  +D    + L+  + K      A  F +    R+ +++ A I+G  +  
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNE 229

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L+LF  ++  GL     +++S  ++C +   L     +H   +K  FSS   + +
Sbjct: 230 QYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGT 289

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+  +  A   F    +       AM+ G V  G   ++  +F  M    +  
Sbjct: 290 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRF 349

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL+ V  A  + K   +G+Q+H   +K GF   +C  +NNA+++LY +C   ++A  
Sbjct: 350 DVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC--VNNAVLDLYGKCKALMEAYL 407

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKD--LRFND-----FQINEYTMINLLSSVG 287
           +F  + + D VSW+  IAA    +E  G + D  L FN+      + +++T  ++L +  
Sbjct: 408 IFQGMKQKDSVSWNAIIAA----LEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             R L  G  +     K G      + + ++ MY KCG +++A+ + D +  +  VSWN+
Sbjct: 464 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 523

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +++G+S N    +A   F  ML+  L P+ +T A++L+  +N  +++   Q+H  IIK  
Sbjct: 524 ILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 583

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            L D+ + S L+  Y KC  + +S  V  +++K++ V  NA+           EAL ++ 
Sbjct: 584 MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFE 643

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
            +       N +TF  VL+AC+ +   + G
Sbjct: 644 RMQKENVVPNHATFVAVLRACSHVGLFDDG 673



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 222/464 (47%), Gaps = 15/464 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  IKN    D ++ T ++  + K      A R  F   N  + T NA++ GL R  
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF  +    +R D  + S +  AC   +   + + VH + +K GF   + + +
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   ++ A + F+     D+V++ A++     NG +D +   F EM   G++ 
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 450

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++F+  +VL A   ++    G  +H   +K G   G    + + ++++Y +CG   +A K
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGL--GSDAFVASTVVDMYCKCGIIDEAQK 508

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           + D I    VVSW+  ++      +  EA   F ++     + + +T   +L +      
Sbjct: 509 LHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLAT 568

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQI     K   ++   I + L+ MY KCG + D+  +F+ +  +D VSWN+MI G
Sbjct: 569 IELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICG 628

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ +G   +AL MF  M + +++PN  T  ++L A S+        + + H++ + + L+
Sbjct: 629 YALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR-YFHLMTTHYKLE 687

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASV 452
             +   +C++   G+     E+ + ++ +  + +AV    L S+
Sbjct: 688 PQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSI 731



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 35/408 (8%)

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM----------------- 348
           GF+    + N L+ MY +C     AR +FD +  +D+VSWN+M                 
Sbjct: 47  GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106

Query: 349 --------------IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
                         ++GY + G F +++D+F  M    + P+  T A +L++ S  + L 
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +QVH+  +K+G  +D    S L+  YGKC +L+++      + ++N V   A  +  V
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               +   LEL+  +      V+  +++   ++CAAM+ L  G+ +H  A+K ++  D  
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++D+Y K  ++ DA+RAF  +   ++   NAMM+G  + G   E   LF  M +  
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 346

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++ D ++   V ++C       + +  + C++   G    +     ++DL G+   L  A
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
            +    M    D+  W ++++A    G+ D  +L  +++L   ++PD+
Sbjct: 406 YLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDD 452


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/753 (31%), Positives = 396/753 (52%), Gaps = 17/753 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFD 70
           D +   T+++ ++   D   A        + D++++NAL+SG   +CQ G    ++ LF 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSG---YCQRGMFQESVDLFV 138

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
            +  +G+ PD  TF+ L+K+C +L+E  +   VH + +K G    V   S  ++ Y K  
Sbjct: 139 EMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR 198

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL- 186
            +  A   F    + + V++ A + G V N ++ +  E+F+EM+ LGL +++ S  +   
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 258

Query: 187 --GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
              A   +  G Q+H   +K  F S     +  AI+++Y +     DA + F  +    V
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSD--RVVGTAIVDVYAKANSLTDARRAFFGLPNHTV 316

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
            + +  +     A  G+EA GLF+ +  +  + +  ++  + S+    +    G+Q+   
Sbjct: 317 ETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCL 376

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K GF   + + NA++ +YGKC  + +A  IF  +  KDSVSWN++IA   +NG ++  
Sbjct: 377 AIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDT 436

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +  F  ML F + P+ +T  S+L+A +  +SL+  + VH  +IKSG   D  + S ++  
Sbjct: 437 ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDM 496

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  ++E++++   I  +  V  NA+ S         EA + +  +     + +  TF
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL  CA +  +E GK IH   +K     D ++ S ++DMY KCG + D+   F K+ +
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 616

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                WNAM+ GYA HG   E   +F +M K  V P+  T++AVL +C H GL  +   Y
Sbjct: 617 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 676

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M+  + L PQLEH+AC+VD+LGR    + A   I+ MP   DA IW++LLS C I  
Sbjct: 677 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 736

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           ++++  LA S +L L PD+ S Y+LLSN+YA +G W DV + R+ +K+  L KEPG SWI
Sbjct: 737 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            V    H F  GD +H +S E+Y+ L  L   M
Sbjct: 797 EVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 829



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 247/510 (48%), Gaps = 19/510 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G  +D    + L+  + K      A  F +    R+ +++ A I+G  +  
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNE 229

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L+LF  ++  GL     +++S  ++C +   L     +H   +K  FSS   + +
Sbjct: 230 QYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGT 289

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+  +  A   F    +       AM+ G V  G   ++  +F  M    +  
Sbjct: 290 AIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRF 349

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL+ V  A  + K   +G+Q+H   +K GF   +C  +NNA+++LY +C   ++A  
Sbjct: 350 DVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC--VNNAVLDLYGKCKALMEAYL 407

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKD--LRFND-----FQINEYTMINLLSSVG 287
           +F  + + D VSW+  IAA    +E  G + D  L FN+      + +++T  ++L +  
Sbjct: 408 IFQGMKQKDSVSWNAIIAA----LEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACA 463

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             R L  G  +     K G      + + ++ MY KCG +++A+ + D +  +  VSWN+
Sbjct: 464 ALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 523

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +++G+S N    +A   F  ML+  L P+ +T A++L+  +N  +++   Q+H  IIK  
Sbjct: 524 ILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 583

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            L D+ + S L+  Y KC  + +S  V  +++K++ V  NA+           EAL ++ 
Sbjct: 584 MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFE 643

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
            +       N +TF  VL+AC+ +   + G
Sbjct: 644 RMQKENVVPNHATFVAVLRACSHVGLFDDG 673



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 222/464 (47%), Gaps = 15/464 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  IKN    D ++ T ++  + K      A R  F   N  + T NA++ GL R  
Sbjct: 271 QLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF  +    +R D  + S +  AC   +   + + VH + +K GF   + + +
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   ++ A + F+     D+V++ A++     NG +D +   F EM   G++ 
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 450

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++F+  +VL A   ++    G  +H   +K G   G    + + ++++Y +CG   +A K
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGL--GSDAFVASTVVDMYCKCGIIDEAQK 508

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           + D I    VVSW+  ++      +  EA   F ++     + + +T   +L +      
Sbjct: 509 LHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLAT 568

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQI     K   ++   I + L+ MY KCG + D+  +F+ +  +D VSWN+MI G
Sbjct: 569 IELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICG 628

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ +G   +AL MF  M + +++PN  T  ++L A S+        + + H++ + + L+
Sbjct: 629 YALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCR-YFHLMTTHYKLE 687

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASV 452
             +   +C++   G+     E+ + ++ +  + +AV    L S+
Sbjct: 688 PQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSI 731



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 35/408 (8%)

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM----------------- 348
           GF+    + N L+ MY +C     AR +FD +  +D+VSWN+M                 
Sbjct: 47  GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106

Query: 349 --------------IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
                         ++GY + G F +++D+F  M    + P+  T A +L++ S  + L 
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +QVH+  +K+G  +D    S L+  YGKC +L+++      + ++N V   A  +  V
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               +   LEL+  +      V+  +++   ++CAAM+ L  G+ +H  A+K ++  D  
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++D+Y K  ++ DA+RAF  +   ++   NAMM+G  + G   E   LF  M +  
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 346

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++ D ++   V ++C       + +  + C++   G    +     ++DL G+   L  A
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQ-VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
            +    M    D+  W ++++A    G+ D  +L  +++L   ++PD+
Sbjct: 406 YLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDD 452


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/757 (31%), Positives = 402/757 (53%), Gaps = 14/757 (1%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           + G   D  +   L+  ++K  D +RA         RD++ +NA+I+GL++      A+ 
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 68  LFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYA 124
            F  ++  G+ P + +  +L      L   E+   +HG   +  FSS V   +G I+ Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYS 274

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS-LT 183
           K G++  A   F   +D D+V++  M+ GY  NG F +  E+F +M+   + +N+ S ++
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 184 AVLGA--SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           A L A  + D+++G++IHG  ++    S +   +   +M +Y +CG+   A ++F  +  
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDIL--VATPLMVMYAKCGETEKAKQLFWGLQG 392

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            D+V+WS  IAA        EA  LF++++    + N  T++++L +     +L+ GK I
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             F  K      +S G AL+SMY KCG    A + F+ +  +D V+WNS+I GY++ G  
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
             A+DMF  +   ++ P+  TM  ++ A +    L Q   +H  I+K GF  D  + + L
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNAL 572

Query: 419 ITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           I  Y KC +L  ++ + ++ D  K+ V  N + +  +      EA+  +  +       N
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPN 632

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             TF  VL A A +    +G A H   ++  +  +  V +++IDMY KCG ++ +++ F 
Sbjct: 633 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFN 692

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++       WNAM+ GYA HG       LF+ M +  V+ D +++++VL++C HAGLV E
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEE 752

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            R     MSD + + P LEHYAC+VDLLGR GL +     I  MP+ PDA +W +LL +C
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++ N+ LG +A   L++L+P N + +V+LS++YA +G W D GK R +M +  L K PG
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SW+ +    H F  GD SH Q + ++     L E M
Sbjct: 873 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKM 909



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 194/741 (26%), Positives = 358/741 (48%), Gaps = 37/741 (4%)

Query: 3   YSLLIKNGHHLDPILS----------------TTLISHFTKFADFRRAFRFLFD-TQNRD 45
           Y  L+ +  HL+P+L                 T LI+ ++ F     A R +FD T N  
Sbjct: 35  YPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLA-RSVFDSTPNPS 93

Query: 46  IITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHG 102
            I +N++I    R  Q   AL+++  +  +GL PD +TF+ ++KAC    +LQE    HG
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
              + G    V++ +G ++ Y+K G++  A   F      D VA+ AM+ G   + +  +
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213

Query: 163 SKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAI 219
           + + F  M+ +G+E +  SL  +      +   E    IHG+  +  F S V    +N +
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV----SNGL 269

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINE 276
           ++LY +CG    A ++FD++ + D VSW   +A  A +G  VE   LF  ++  + +IN+
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            + ++   +      L  GK+I     +      + +   L+ MY KCG+   A+ +F  
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           L  +D V+W+++IA   + G+  +AL +F  M    + PN  T+ SIL A ++   LK  
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             +H   +K+    D S  + L++ Y KC     +    + +  ++ V  N+L +     
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
                A++++  +  S    +  T   V+ ACA + DL+QG  IH L +K  ++ D  V+
Sbjct: 510 GDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVK 569

Query: 517 SAVIDMYCKCGTIEDAKRAFRK--ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           +A+IDMY KCG++  A+  F K    +D +  WN ++  Y Q+G   E  + F++M    
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVT-WNVIIAAYMQNGHAKEAISSFHQMRLEN 628

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
             P+ +T+++VL +  +    RE   + +C+  + G +        ++D+  + G L+ +
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNTLVGNSLIDMYAKCGQLDYS 687

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYAS 693
           +   ++M    D   W ++LS   ++G+ D  +   S + E Q   +S ++V + +    
Sbjct: 688 EKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRH 746

Query: 694 AGMWNDVGKLRKEMKEKFLCK 714
           AG+  +  K+   M +K+  K
Sbjct: 747 AGLVEEGRKIFHSMSDKYHIK 767



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 12/307 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   +K     D    T L+S + K   F  A        +RDI+T+N+LI+G A+   
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD 511

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              A+ +F +LR   + PDA T   +V AC     L +   +HG+ +KLGF S  ++ + 
Sbjct: 512 PYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNA 571

Query: 119 FIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G + SAE  F       D V +  ++  Y+ NG   ++   F +MR      
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +  +VL A+  +   +EG   H   +++GFLS     + N+++++Y +CGQ   + K
Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL--VGNSLIDMYAKCGQLDYSEK 689

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+E+   D VSW+  +   A    G  A  LF  ++ +  QI+  + +++LS+     +
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 749

Query: 292 LRAGKQI 298
           +  G++I
Sbjct: 750 VEEGRKI 756


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 244/746 (32%), Positives = 402/746 (53%), Gaps = 22/746 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLF-DR 71
           D +L+T LI  +        + R +FD  + +++I +NAL+SG  R    G  +K+F D 
Sbjct: 78  DYVLNTRLIKMYAMCGSPLDS-RLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDL 136

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +     +PD FTF S++KACG + +    E++HG+ +K+G    V++ +  +  Y K G 
Sbjct: 137 VSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGA 196

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE------LNEFSL 182
           +  A   F    + + V++ +M+C +  NG    S ++ +EM  LG E      +   ++
Sbjct: 197 VDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM--LGEEGLLPDVVTVVTI 254

Query: 183 TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
             V     +V  G  IHG  VK+G    V   +NNA++ +Y +CG   +A   F +    
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVM--VNNAMVYMYSKCGYLNEAQMSFVKNNNK 312

Query: 243 DVVSWSERIAA---ACDGVEAFGLFKDLRFN--DFQINEYTMINLLSSVGGERILRAGKQ 297
           +VVSW+  I+A     D  EAF L ++++    + + NE T++N+L +   +  LR+ K+
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +  + ++  F  V  + NA I  Y KCG +N A  +F  +  K   SWN++I G+++NG 
Sbjct: 373 LHGYSFRHCFQHV-ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGD 431

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +AL +   M      P+ +T++S+L A ++ KSL+   ++H +++++G   D  + + 
Sbjct: 432 PRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTS 491

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L++ Y  C   + ++ +   +  KN V  NA+ S         E+L L+R       + +
Sbjct: 492 LLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSH 551

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
                 V  AC+ ++ L  GK  H   LKA   +D FV  ++IDMY K G I+++++ F 
Sbjct: 552 EIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFD 611

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
            +   ++A WNA+++ +  HG   E   L+ +M K G  PD  TY+ +L +C HAGLV E
Sbjct: 612 GLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEE 671

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y   M + + + P+LEHYAC++D+L R G L+ A   +++MP   D  IW SLL +C
Sbjct: 672 GLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSC 731

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
             +G +++G     KLLEL+PD    YVLLSNLYA  G W+ V ++R+ MKE  L K+ G
Sbjct: 732 RTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAG 791

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEI 743
            SWI VGG  + F  GDS   +S EI
Sbjct: 792 CSWIEVGGRVYSFVVGDSLQPKSAEI 817



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 122/256 (47%), Gaps = 10/256 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+  +++NG   D  + T+L+SH+        A R LFD  ++++++++NA+ISG ++ 
Sbjct: 472 EIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA-RVLFDRMKDKNLVSWNAMISGYSQN 530

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                +L LF +   +G++       S+  AC  L    +    HG  LK   +   ++ 
Sbjct: 531 GLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG 590

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I+ YAKSG I  +   F    D +  ++ A++  +  +G   ++ E++  M+ +G  
Sbjct: 591 CSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM 650

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+   +L   G +  V+EG +          +     H    ++++  R G+  DA+
Sbjct: 651 PDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY-ACLIDMLARAGRLDDAL 709

Query: 234 KMFDEIT-EPDVVSWS 248
           ++ +E+  E D   WS
Sbjct: 710 RLVNEMPEEADNRIWS 725



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 4/176 (2%)

Query: 483 IVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           ++L+AC    D+E G+ +H  ++    Y  D  + + +I MY  CG+  D++  F  +  
Sbjct: 48  LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLF-NKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
            +L  WNA++ GY ++G Y +V  +F + +S    +PD  T+ +V+ +C     VR    
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +  M    GL+  +     +V + G+ G ++ A    D MP   +   W S++ A
Sbjct: 168 -IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP-ETNLVSWNSMICA 221


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/566 (34%), Positives = 338/566 (59%), Gaps = 5/566 (0%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +++G ++H   +K G       +L N ++++Y +CG   DA ++FD I + ++VSW+  I
Sbjct: 112 LEQGREVHAAILKSGIQPN--RYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMI 169

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
            A   G   +EA+  ++ ++    + ++ T ++LL++     +L+ G+++     K G  
Sbjct: 170 EAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLE 229

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               +G +L+ MY KCG ++ A+ IFD L  K+ V+W  +IAGY++ G  + AL++   M
Sbjct: 230 LEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM 289

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            +  + PN  T  SIL+  +   +L+   +VH +II+SG+  +  +++ LIT Y KC  L
Sbjct: 290 QQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGL 349

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E++++  ++  ++ V   A+ +       H EA++L+R +     + +  TF+  L +C
Sbjct: 350 KEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSC 409

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           ++   L++GK+IH   + A Y  D++++SA++ MY KCG+++DA+  F ++   ++  W 
Sbjct: 410 SSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWT 469

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           AM+ G AQHG   E    F +M K G+KPD++T+ +VL++C H GLV E R +   M   
Sbjct: 470 AMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLD 529

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           +G+ P +EHY+C VDLLGR G LE A+  I  MP  P   +W +LLSAC I+ +++ G  
Sbjct: 530 YGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGER 589

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           A   +L+L PD++  YV LSN+YA+AG + D  K+R+ M+++ + KEPG SWI V G  H
Sbjct: 590 AAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVH 649

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHM 754
            F+  D SH ++KEIY EL KL E +
Sbjct: 650 VFHVEDKSHPEAKEIYAELGKLTEQI 675



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 262/530 (49%), Gaps = 26/530 (4%)

Query: 17  LSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           L+T  +SH      A FR+           D +  +  +S L +  +   AL + + +  
Sbjct: 40  LTTPTVSHDQLPGNAGFRKV----------DTLANSGDVSILCKQGRLKEALGILNTMIL 89

Query: 75  QGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           QG R  +  F  L++ C    SL++   VH   LK G     YL +  +  YAK G +  
Sbjct: 90  QGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTD 149

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F    D + V++TAM+  +V   +  ++ + +  M+  G + ++ +  ++L A  +
Sbjct: 150 ARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN 209

Query: 192 ---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
              ++ G+++H    K G    +   +  +++ +Y +CG    A  +FD++ E +VV+W+
Sbjct: 210 PELLQVGQKVHMEIAKAGL--ELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWT 267

Query: 249 ERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             IA      +   A  L + ++  +   N+ T  ++L        L  GK++  +  + 
Sbjct: 268 LLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQS 327

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G+   + + NALI+MY KCG + +AR +F  L  +D V+W +M+ GY++ GF ++A+D+F
Sbjct: 328 GYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLF 387

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M +  + P+  T  S L + S+   L++   +H  ++ +G+ LD  + S L++ Y KC
Sbjct: 388 RRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKC 447

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
            ++++++ V +++ ++N V   A+ +         EALE +  +     + +  TF+ VL
Sbjct: 448 GSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVL 507

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
            AC  +  +E+G+  H  ++   Y     VE  S  +D+  + G +E+A+
Sbjct: 508 SACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 556



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 203/405 (50%), Gaps = 4/405 (0%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA G+   +     ++       LL      R L  G+++ A   K G      + N L+
Sbjct: 79  EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           SMY KCG + DAR +FD +  ++ VSW +MI  +       +A   +  M      P+  
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  S+L A +N + L+   +VH  I K+G  L+  + + L+  Y KC  +++++ +  ++
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            +KN V    L +          ALEL   +  +    N  T++ +L+ C     LE GK
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            +H   +++ Y ++I+V +A+I MYCKCG +++A++ F  +    +  W AM+ GYAQ G
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH-GLIPQLEH 617
            + E  +LF +M + G+KPD++T+ + LTSC     ++E ++    +  +H G    +  
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL--VHAGYSLDVYL 436

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
            + +V +  + G ++ A++  +QM    +   W ++++ C  +G 
Sbjct: 437 QSALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQHGR 480



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/545 (24%), Positives = 258/545 (47%), Gaps = 49/545 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ ++K+G   +  L  TL+S + K      A R     ++R+I+++ A+I       
Sbjct: 117 EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGN 176

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q+  A K ++ ++  G +PD  TF SL+ A  +   LQ  + VH    K G      + +
Sbjct: 177 QNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGT 236

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G+I  A++ F    + + V +T ++ GY   G+ D + E+  +M+   +  
Sbjct: 237 SLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAP 296

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+ + T++L        ++ G+++H + ++ G+  G    + NA++ +Y +CG   +A K
Sbjct: 297 NKITYTSILQGCTTPLALEHGKKVHRYIIQSGY--GREIWVVNALITMYCKCGGLKEARK 354

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   DVV+W+  +          EA  LF+ ++    + ++ T  + L+S      
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAF 414

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ GK I       G+   V + +AL+SMY KCG ++DAR +F+ +  ++ V+W +MI G
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITG 474

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLL 410
            +++G   +AL+ F  M +  + P+  T  S+L A ++   +++  +   S  +  G   
Sbjct: 475 CAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKP 534

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
                SC +   G+   L E++ V+  +                         +   ++W
Sbjct: 535 MVEHYSCFVDLLGRAGHLEEAENVILTM-----------------------PFQPGPSVW 571

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD-IFVESAVIDMYCKCGTI 529
           G+           +L AC   +D+E+G+      LK   D D  +V  A+ ++Y   G  
Sbjct: 572 GA-----------LLSACRIHSDVERGERAAENVLKLDPDDDGAYV--ALSNIYAAAGRY 618

Query: 530 EDAKR 534
           EDA++
Sbjct: 619 EDAEK 623



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 7/228 (3%)

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL +  T+      V    F  +L+ CA +  LEQG+ +H   LK+    + ++E+ ++
Sbjct: 79  EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY KCG++ DA+R F  I   ++  W AM+  +       E    +  M   G KPD++
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198

Query: 581 TYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           T++++L +  +  L++   + ++        L P++     +V +  + G +  A++  D
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFD 256

Query: 640 QMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYV 685
           ++P   +   W  L++     G +D  L LL   +  E+ P N+ TY 
Sbjct: 257 KLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAP-NKITYT 302


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 245/748 (32%), Positives = 394/748 (52%), Gaps = 56/748 (7%)

Query: 58  RFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSS 111
           R C++G    A++L   ++ +GL  ++ T+  +++ C  L   ++ ++VH    +LG + 
Sbjct: 52  RLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAI 111

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            +YL +  I  Y+K G++ S E  FR     D V +++M+  Y  N    K+ + F  M+
Sbjct: 112 DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171

Query: 172 SLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
              +E N  +  ++L A  +   +++  +IH      G  + V   +  A++ +Y +CG+
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVA--VATALITMYSKCGE 229

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSS 285
              A ++F ++ E +VVSW+  I A        EAF L++ +       N  T ++LL+S
Sbjct: 230 ISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS 289

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 L  G++I +   + G    V + NALI+MY KC  + DAR  FD +  +D +SW
Sbjct: 290 CNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISW 349

Query: 346 NSMIAGYSENGFFN-QALDMFCHMLEF----SLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           ++MIAGY+++G+ + ++LD    +LE      + PN  T  SIL+A S   +L+Q  Q+H
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIH 409

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL-VYASCH 459
           + I K GF  D S+ + +   Y KC ++ E+++V S+++ KN V   A AS+L +Y  C 
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV---AWASLLTMYIKCG 466

Query: 460 ---------------------------------AEALELYRTIWGSCREVNGSTFSIVLK 486
                                            A+  EL  ++     + +  T   +L+
Sbjct: 467 DLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           AC A++ LE+GK +H  A+K   + D  V +++I MY KCG + +A+  F KI       
Sbjct: 527 ACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVA 586

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WNAM+ GY QHG   E  +LF +M K  V P+EIT+ AV+++C  AGLV+E R     M 
Sbjct: 587 WNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQ 646

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           +   + P  +HY C+VDLLGR G L+ A+  I +MP  PD  +W +LL AC  + N+ L 
Sbjct: 647 EDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLA 706

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
             A   +L L+P N S YV LSN+YA AG W+D  K+RK M +K L K+ G S I + G 
Sbjct: 707 EWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGR 766

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHM 754
            H F A D +H +   I+ EL  L + M
Sbjct: 767 IHTFVAEDCAHPEIDSIHAELEMLTKEM 794



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 281/603 (46%), Gaps = 49/603 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  L + G  +D  L  +LI+ ++KF D     +       RD++T++++I+  A    
Sbjct: 100 VHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNH 159

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              A   F+R++   + P+  TF S++KAC +   L++   +H V    G  + V + + 
Sbjct: 160 PAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATA 219

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y+K GEI  A   F+   + + V++TA++     + + +++ E++ +M   G+  N
Sbjct: 220 LITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPN 279

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +  ++L +      +  G +IH    + G  + V   + NA++ +Y +C    DA + 
Sbjct: 280 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV--VANALITMYCKCNCIQDARET 337

Query: 236 FDEITEPDVVSWSERIAA-ACDGV-------EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           FD +++ DV+SWS  IA  A  G        E F L + +R      N+ T +++L +  
Sbjct: 338 FDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS 397

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL---------- 337
               L  G+QI A   KVGF    S+  A+ +MY KCG + +A  +F  +          
Sbjct: 398 VHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWAS 457

Query: 338 ----------------IF-----KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
                           +F     ++ VSWN MIAGY+++G   +  ++   M      P+
Sbjct: 458 LLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPD 517

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T+ SILEA     +L++   VH+  +K G   D  + + LI  Y KC  + E++ V  
Sbjct: 518 RVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFD 577

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           +I  ++ V  NA+ +         EA++L++ +       N  TF+ V+ AC     +++
Sbjct: 578 KISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQE 637

Query: 497 GKAI-HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGY 554
           G+ I   +    R          ++D+  + G +++A+   +++ C   ++ W+A++   
Sbjct: 638 GREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGAC 697

Query: 555 AQH 557
             H
Sbjct: 698 KSH 700



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 229/481 (47%), Gaps = 16/481 (3%)

Query: 237 DEITEPDVVSWSE--RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           +E+  P  VS  E  R+  A    EA  L   ++     +N  T   ++      R    
Sbjct: 37  EELAGPRSVSGGEVWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFED 96

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GK +     ++G    + +GN+LI+ Y K G V     +F  +  +D V+W+SMIA Y+ 
Sbjct: 97  GKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A D F  M + ++ PN  T  SIL+A +N   L++A ++H+ +  SG   D ++
Sbjct: 157 NNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAV 216

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + LIT Y KC  ++ +  +  ++ ++N V   A+           EA ELY  +  +  
Sbjct: 217 ATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGI 276

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             N  TF  +L +C     L +G+ IH    +   + D+ V +A+I MYCKC  I+DA+ 
Sbjct: 277 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARE 336

Query: 535 AFRKICRDSLAGWNAMMMGYAQHG-----CYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            F ++ +  +  W+AM+ GYAQ G        EV  L  +M + GV P+++T++++L +C
Sbjct: 337 TFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
              G + + R   + +S + G          I ++  + G +  A+    +M    +   
Sbjct: 397 SVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVA 454

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLL--ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           W SLL   T+Y  I  G L  ++ +  E+   N  ++ L+   YA +G    V +L   M
Sbjct: 455 WASLL---TMY--IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509

Query: 708 K 708
           K
Sbjct: 510 K 510


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/757 (31%), Positives = 400/757 (52%), Gaps = 14/757 (1%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           + G   D  +   L+  ++K  D +RA         RD++ +NA+I+GL++      A+ 
Sbjct: 157 RRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVD 216

Query: 68  LFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYA 124
            F  ++  G+ P + +  +L      L   E+   +HG   +  FSS V   +G I+ Y+
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYS 274

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS-LT 183
           K G++  A   F   +D D+V++  M+ GY  NG F +  E+F +M+   + +N+ S ++
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334

Query: 184 AVLGA--SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           A L A  + D+++G++IHG  ++    S +   +   +M +Y +CG+   A ++F  +  
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDIL--VATPLMVMYAKCGETEKAKQLFWGLQG 392

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            D+V+WS  IAA        EA  LF++++    + N  T++++L +     +L+ GK I
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             F  K      +S G AL+SMY KCG    A + F+ +  +D V+WNS+I GY++ G  
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
             A+DMF  +   ++ P+  TM  ++ A +    L Q   +H  I+K GF  D  + + L
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNAL 572

Query: 419 ITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           I  Y KC +L  ++ + ++ D  K+ V  N + +  +      EA+  +  +       N
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPN 632

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             TF  VL A A +    +G A H   ++  +  +  V +++IDMY KCG +  +++ F 
Sbjct: 633 SVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFN 692

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++       WNAM+ GYA HG       LF+ M +  V+ D +++++VL++C H GLV E
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEE 752

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            R     MSD + + P LEHYAC+VDLLGR GL +     I  MP+ PDA +W +LL +C
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++ N+ LG +A   L++L+P N + +V+LS++YA +G W D GK R +M +  L K PG
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SW+ +    H F  GD SH Q + ++     L E M
Sbjct: 873 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKM 909



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 193/741 (26%), Positives = 356/741 (48%), Gaps = 37/741 (4%)

Query: 3   YSLLIKNGHHLDPILS----------------TTLISHFTKFADFRRAFRFLFD-TQNRD 45
           Y  L+ +  HL+P+L                 T LI+ ++ F     A R +FD T N  
Sbjct: 35  YPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLA-RSVFDSTPNPS 93

Query: 46  IITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHG 102
            I +N++I    R  Q   AL+++  +  +GL PD +TF+ ++KAC    +LQE    HG
Sbjct: 94  RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
              + G    V++ +G ++ Y+K G++  A   F      D VA+ AM+ G   + +  +
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCE 213

Query: 163 SKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAI 219
           + + F  M+ +G+E +  SL  +      +   E    IHG+  +  F S V    +N +
Sbjct: 214 AVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV----SNGL 269

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINE 276
           ++LY +CG    A ++FD++ + D VSW   +A  A +G  VE   LF  ++  + +IN+
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            + ++   +      L  GK+I     +      + +   L+ MY KCG+   A+ +F  
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           L  +D V+W+++IA   + G+  +AL +F  M    + PN  T+ SIL A ++   LK  
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             +H   +K+    D S  + L++ Y KC     +    + +  ++ V  N+L +     
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
                A++++  +  S    +  T   V+ ACA + DL+QG  IH L +K  ++ D  V+
Sbjct: 510 GDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVK 569

Query: 517 SAVIDMYCKCGTIEDAKRAFRK--ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           +A+IDMY KCG++  A+  F K    +D +  WN ++  Y Q+G   E  + F++M    
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVT-WNVIIAAYMQNGHAKEAISSFHQMRLEN 628

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
             P+ +T+++VL +  +    RE   + +C+  + G +        ++D+  + G L  +
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNTLVGNSLIDMYAKCGQLXYS 687

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYAS 693
           +   ++M    D   W ++LS   ++G+ D  +   S + E Q   +S ++V + +    
Sbjct: 688 EKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRH 746

Query: 694 AGMWNDVGKLRKEMKEKFLCK 714
            G+  +  K+   M +K+  K
Sbjct: 747 XGLVEEGRKIFHSMSDKYHIK 767



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 12/307 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   +K     D    T L+S + K   F  A        +RDI+T+N+LI+G A+   
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD 511

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              A+ +F +LR   + PDA T   +V AC     L +   +HG+ +KLGF S  ++ + 
Sbjct: 512 PYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNA 571

Query: 119 FIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G + SAE  F       D V +  ++  Y+ NG   ++   F +MR      
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 631

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +  +VL A+  +   +EG   H   +++GFLS     + N+++++Y +CGQ   + K
Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL--VGNSLIDMYAKCGQLXYSEK 689

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+E+   D VSW+  +   A    G  A  LF  ++ +  QI+  + +++LS+     +
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGL 749

Query: 292 LRAGKQI 298
           +  G++I
Sbjct: 750 VEEGRKI 756


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 236/761 (31%), Positives = 411/761 (54%), Gaps = 16/761 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++LL+K+  HL   L+T L+  + K    R A +   +   R I ++NAL+       
Sbjct: 67  QLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSG 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A++L+  +R  G+  DA TF S++KACG+L E+ +   +HGV +K G+   V++ +
Sbjct: 125 KYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
             I  Y K G++  A + F   +    D V++ +++  +V  G   ++  +F  M+ +G+
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGV 244

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N ++  A L    D   VK G  IHG  +K    + V  ++ NA++ +Y +CG+  DA
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADV--YVANALIAMYAKCGRMEDA 302

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F+ +   D VSW+  ++         +A   F+D++ +  + ++ +++NL+++ G  
Sbjct: 303 GRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRS 362

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK++ A+  + G    + IGN L+ MY KC  V      F+ +  KD +SW ++I
Sbjct: 363 GNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTII 422

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           AGY++N F  +A+++F  +    +  +   + S+L A S  KS     ++H ++ K   L
Sbjct: 423 AGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-L 481

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + ++  YG+   ++ ++R    I  K+ V   ++ +  V+     EALEL+ ++
Sbjct: 482 ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +  + +       L A A ++ L++GK IH   ++  +  +  + S+++DMY  CGT+
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E++++ F  + +  L  W +M+     HGC ++   LF KM+   V PD IT+LA+L +C
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYAC 661

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E + +   M   + L P  EHYAC+VDLL R   LE A   +  MPI P + I
Sbjct: 662 SHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEI 721

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC I+ N +LG LA  +LL+   +N   Y L+SN++A+ G WNDV ++R  MK 
Sbjct: 722 WCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKG 781

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             L K PG SWI V    H F A D SH Q+ +IY +L + 
Sbjct: 782 NGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQF 822



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 18/282 (6%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L+    +K+L Q  Q+H+ ++KS   L   + + L+  YGKC +L ++ +V  E+ ++ 
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSH--LSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
               NAL    V +  + EA+ELY+ +      ++  TF  VLKAC A+ +   G  IH 
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCY 560
           +A+K  Y + +FV +A+I MY KCG +  A+  F  I   ++    WN+++  +   G  
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA- 619
            E  +LF +M + GV  +  T++A L          E  +++     +HG + +  H+A 
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGV-------EDPSFVKLGMGIHGAVLKSNHFAD 282

Query: 620 -----CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
                 ++ +  + G +E A    + M +  D   W +LLS 
Sbjct: 283 VYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLSG 323



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 16/188 (8%)

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S++L  C A   L QG+ +H L LK+      F+ + ++ MY KCG++ DA + F ++  
Sbjct: 50  SLLLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSE 107

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            ++  WNA+M  +   G Y E   L+  M   GV  D  T+ +VL +C   G + E+R  
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKAC---GALGESRL- 163

Query: 602 LSCMSDLHGLIPQLEH----YAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLL 654
               +++HG+  +  +    + C  ++ + G+ G L GA++  D + +  +  + W S++
Sbjct: 164 ---GAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 655 SACTIYGN 662
           SA    GN
Sbjct: 221 SAHVAEGN 228


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 245/744 (32%), Positives = 394/744 (52%), Gaps = 68/744 (9%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           ++ ++K   FR A + + D+   D+++++ALISG  +  +   AL  +  +   G + + 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 82  FTFSSLVKACGSLQENEIVHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           FTFSS++K C SL  N       L+LG    RV LV+                       
Sbjct: 149 FTFSSVLKGC-SLTRN-------LELGKQIHRVALVT----------------------- 177

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQ 197
                                       EM S G+  NEFSL+ VL A   +++   G +
Sbjct: 178 ----------------------------EMISTGISPNEFSLSTVLNACAGLEDENYGMK 209

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-- 255
           +HG+ +K+G+ S   +   NA++++Y + G    A+ +F EI +PD+VSW+  IA     
Sbjct: 210 VHGYLIKLGYDSDPFS--ANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLH 267

Query: 256 -DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
                A  L   +       + +T+ + L +     +++ G+Q+ +   K+       +G
Sbjct: 268 EKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVG 327

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             LI MY KCG + DAR +FD +  KD + WNS+I+GYS  G+  +A+ +F +M +  L 
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            N  T+++IL++ + S++     QVH+  IKSG+  D  + + L+ +YGKC  L ++ +V
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
                 ++ V   ++ +         EAL++Y  +     + +   FS +  ACA ++  
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAY 507

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           EQGK IH   LK     D+F  +++++MY KCG+I+DA   F +I    +  W+AM+ G 
Sbjct: 508 EQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGL 567

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQHG   +   LF +M K G+ P+ IT ++VL++C HAGLV EAR +   M  L G+ P 
Sbjct: 568 AQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPT 627

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
            EHYAC+VD+LGRVG L+ A + + +MP    A +W +LL A  I+ NI+LG  A   LL
Sbjct: 628 QEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLL 687

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            L+P+   T++LL+N+YAS GMW++V K+R+ MK   + KEPG SWI +    + F  GD
Sbjct: 688 TLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGD 747

Query: 735 SSHSQSKEIYKELIKLYEHMVATA 758
            SH +SKEIY +L  L E + +  
Sbjct: 748 RSHPRSKEIYVKLDDLRERLTSAG 771



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 225/448 (50%), Gaps = 12/448 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  LIK G+  DP  +  L+  + K      A    ++    DI+++NA+I+G     
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  ALKL  ++    + P  FT SS +KAC   G ++    +H   +K+      ++  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y+K G +  A M F      D + + +++ GY   G   ++  +F  M   GLE 
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 178 NEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+ +L+ +L ++   +     EQ+H   +K G+      ++ N++++ Y +C    DA K
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYD--GYVANSLLDSYGKCCLLEDAAK 446

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     D+V+++  I A      G EA  ++  ++  D + + +   +L ++      
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              GKQI     K G +  V  GN+L++MY KCG ++DA  IF+ + ++  VSW++MI G
Sbjct: 507 YEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGG 566

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
            +++G   +AL +F  ML+  ++PN  T+ S+L A +++  + +A +    + K  G   
Sbjct: 567 LAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITP 626

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEI 438
                +C++   G+   L+E+  ++ E+
Sbjct: 627 TQEHYACMVDILGRVGRLDEAMVLVKEM 654



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 131/314 (41%), Gaps = 45/314 (14%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L   + SK +   M +H+ II+        + + L+  Y KC     +++++ +  + +
Sbjct: 56  LLLQFTASKDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPD 112

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            V  +AL S  V      EAL  Y  ++    + N  TFS VLK C+   +LE GK IH 
Sbjct: 113 LVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHR 172

Query: 503 LAL----------------------------------------KARYDQDIFVESAVIDM 522
           +AL                                        K  YD D F  +A++DM
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y K G  E A   F +I +  +  WNA++ G   H        L  KM  + V P   T 
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
            + L +C   GLV+  R   S +  +  + P       ++D+  + GLL+ A+M  D MP
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMD-MEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP 351

Query: 643 IPPDAHIWQSLLSA 656
              D  +W S++S 
Sbjct: 352 X-KDVIVWNSIISG 364


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/741 (31%), Positives = 404/741 (54%), Gaps = 9/741 (1%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           LIS ++K      A RF  +  +   +++++L++  +       A++ F  +R +G+  +
Sbjct: 43  LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102

Query: 81  AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
            F    ++K     +    VH + +  GF S V++ +  +  Y   G +  A   F +  
Sbjct: 103 EFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEAD 162

Query: 141 DLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGE 196
              N V++  ++  YV N +   + +VF EM   G++  EF  + V+ A   S +++ G 
Sbjct: 163 SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGR 222

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-AC 255
           Q+H   V++G+   V     NA++++Y++ G+   A  +F+++ + DVVSW+  I+    
Sbjct: 223 QVHAMVVRMGYDKDVFT--ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280

Query: 256 DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           +G +  A  L   ++++    N +T+ ++L +  G      G+QI  F  K        I
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           G  L+ MY K   ++DAR +FD++  +D +  N++I+G S  G  ++AL +F  + +  L
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             N  T+A++L++ ++ ++     QVH+  +K GF+ D  +++ LI +Y KC+ L+++ R
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V  E    + +   ++ + L        A++L+  +     E +    S +L ACA+++ 
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            EQGK +H   +K ++  D F  +A++  Y KCG+IEDA+ AF  +    +  W+AM+ G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
            AQHG       LF +M   G+ P+ IT  +VL +C HAGLV EA+ Y + M ++ G+  
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 640

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EHY+C++DLLGR G L+ A   ++ MP   +A IW +LL A  ++ + +LG LA  KL
Sbjct: 641 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKL 700

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
             L+P+   T+VLL+N YASAGMWN+V K+RK MK+  + KEP  SWI V    H F  G
Sbjct: 701 FILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVG 760

Query: 734 DSSHSQSKEIYKELIKLYEHM 754
           D SH  +KEIY +L++L + M
Sbjct: 761 DKSHPMTKEIYAKLVELGDLM 781



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 250/545 (45%), Gaps = 47/545 (8%)

Query: 170 MRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           MRS G    + +  A   A   +  G  +H   +K G L+   NHL    ++ Y +C + 
Sbjct: 1   MRSAGTISQQLTRYAAAQA---LLPGAHLHASLLKSGSLASFRNHL----ISFYSKCRRP 53

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A + FDEI +P  VSWS  + A + +G+   A   F  +R      NE+ +  +L  V
Sbjct: 54  CCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCV 113

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSW 345
              R+   G Q+ A     GF   V + NAL++MYG  G ++DAR +F+     +++VSW
Sbjct: 114 PDARL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSW 170

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N +++ Y +N     A+ +F  M+   + P  +  + ++ A + S++++   QVH+ +++
Sbjct: 171 NGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR 230

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G+  D    + L+  Y K   ++ +  +  ++   + V  NAL S  V       A+EL
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
              +  S    N  T S +LKAC+     + G+ IH   +KA  D D ++   ++DMY K
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
              ++DA++ F  +    L   NA++ G +  G + E  +LF ++ K G+  +  T  AV
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410

Query: 586 LTSCC-----------HA-----GLVREARTY---------LSCMSDLHGLIPQLEH--- 617
           L S             HA     G + +A             SC+SD + +  +      
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470

Query: 618 YAC--IVDLLGRVGLLEGAK---MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
            AC  ++  L +    EGA    M + +  + PD  +  SLL+AC      + G    + 
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530

Query: 673 LLELQ 677
           L++ Q
Sbjct: 531 LIKRQ 535



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G   D  +   LI  + K +    A R   +  + DII   ++I+ L++  
Sbjct: 425 QVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD 484

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               A+KLF  +  +GL PD F  SSL+ AC SL   ++ + VH   +K  F S  +  +
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G I  AE+ F    +   V+++AM+ G   +G   ++ E+F  M   G+  
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604

Query: 178 NEFSLTAVLGA 188
           N  ++T+VL A
Sbjct: 605 NHITMTSVLCA 615



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ LIK     D      L+  + K      A         R +++++A+I GLA+  
Sbjct: 526 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 585

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL+LF R+  +G+ P+  T +S++ AC
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCAC 616


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 246/767 (32%), Positives = 402/767 (52%), Gaps = 28/767 (3%)

Query: 7   IKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG 63
           + N +HL   L T L+  +    +F D    F  L        + +N LI G        
Sbjct: 64  LSNHNHL--ALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHS 121

Query: 64  PALKLFDRL--RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
            A+  + ++        PDA T   +VK+C   G++    +VH      G +S VY+ S 
Sbjct: 122 LAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSA 181

Query: 119 FIENYAKSGEIVSAE-----MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            I+ Y+ +G +  A      M +RDC     V +  M+ GY+  G+   +  +F  MR  
Sbjct: 182 LIKMYSDAGLLRDARDAFDGMPWRDC-----VLWNVMMDGYIKAGDVGGAVRLFRNMRVS 236

Query: 174 GLELNEFSLT---AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G E N  +L    +V  A  D+  G Q+H   VK G    V   + N ++++Y +C    
Sbjct: 237 GCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVA--VANTLLSMYAKCRCLD 294

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA ++F+ +   D+V+W+  I+    +G+  EA GLF D+  +  + +  T+++LL ++ 
Sbjct: 295 DAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALT 354

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L+ GK++  +  +        + +AL+ +Y KC  V  AR+++D     D V  ++
Sbjct: 355 DLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGST 414

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I+GY  NG   +AL MF ++LE  + PN  T+AS+L A ++  +L    ++H +++++ 
Sbjct: 415 VISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNA 474

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           +     + S L+  Y KC  L+ S  + S++  K+ V  N++ S         EAL+L+R
Sbjct: 475 YEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFR 534

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +     + N  T S  L ACA++  +  GK IH + +K     DIF ESA+IDMY KCG
Sbjct: 535 QMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCG 594

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            +E A R F  +   +   WN+++  Y  HG   E  +  ++M + G KPD +T+LA+++
Sbjct: 595 NMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALIS 654

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAGLV E      CM+  + + P++EH+AC+VDL  R G L+ A   I  MP  PDA
Sbjct: 655 ACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDA 714

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW +LL AC ++ N++L  +A  +L +L P N   YVL+SN+ A AG W+ V K+R+ M
Sbjct: 715 GIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLM 774

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           K+  + K PGYSW+ V   +H F A D SH +S++IY  L  L + +
Sbjct: 775 KDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQEL 821



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 229/452 (50%), Gaps = 14/452 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL +K G   +  ++ TL+S + K      A+R        D++T+N +ISG  +  
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  +   G RPD+ T  SL+ A      L++ + VHG  ++       +LVS
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K  ++ +A   +     +D V  + ++ GYV NG  +K+ ++F  +    ++ 
Sbjct: 383 ALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKP 442

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++ +VL A   +     G++IHG+ ++  +  G C ++ +A+M++Y +CG+   +  
Sbjct: 443 NAVTVASVLPACASISALPLGQEIHGYVLRNAY-EGKC-YVESALMDMYAKCGRLDLSHY 500

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F +++  D V+W+  I++     +  EA  LF+ +     + N  T+ + LS+      
Sbjct: 501 IFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPA 560

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GK+I     K      +   +ALI MY KCG +  A  +F+++  K+ VSWNS+I+ 
Sbjct: 561 IYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISA 620

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G   +++     M E    P+  T  +++ A +++  +++ +Q+   + K  +L+ 
Sbjct: 621 YGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKE-YLIA 679

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
             M   +C++  Y +   L+++ + ++++  K
Sbjct: 680 PRMEHFACMVDLYSRSGRLDKAIQFIADMPFK 711



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 179/361 (49%), Gaps = 15/361 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           +++  +I+N  H+D  L + L+  + K  D R A R L+D     D++  + +ISG    
Sbjct: 364 EVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA-RNLYDAARAIDVVIGSTVISGYVLN 422

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
             S  AL++F  L  Q ++P+A T +S++ AC S   L   + +HG  L+  +  + Y+ 
Sbjct: 423 GMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE 482

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK G +  +   F      D V + +M+  +  NGE  ++ ++F +M   G++
Sbjct: 483 SALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIK 542

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  ++++ L A   +     G++IHG  +K    + +     +A++++Y +CG    A+
Sbjct: 543 YNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADI--FAESALIDMYAKCGNMELAL 600

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ + + + VSW+  I+A    G+  E+      ++   ++ +  T + L+S+     
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAG 660

Query: 291 ILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++  G Q+ Q    +      +     ++ +Y + G+++ A      + FK D+  W ++
Sbjct: 661 LVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGAL 720

Query: 349 I 349
           +
Sbjct: 721 L 721


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/704 (32%), Positives = 386/704 (54%), Gaps = 15/704 (2%)

Query: 62  SGPALKLF-DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           S  AL +F D  R  G  P+ F  +S+++AC   G +++   +HG  ++ GF   VY+ +
Sbjct: 17  SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 76

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K+G+I  A + F   L+   V +T ++ GY   G    S E+F +MR   +  
Sbjct: 77  SLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP 136

Query: 178 NEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           + + +++VL A     F ++ G+QIH + ++ G    V   + N +++ Y +C +     
Sbjct: 137 DRYVVSSVLSACSMLEF-LEGGKQIHAYVLRRGTEMDVS--VVNVLIDFYTKCNRVKAGR 193

Query: 234 KMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FD++   +++SW+  I+         EA  LF ++    ++ + +   ++L+S G   
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q+ A+  K        + N LI MY K   + DA+ +FD +  ++ +S+N+MI 
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GYS     ++AL++F  M      P+  T  S+L   ++  +L+ + Q+H  IIK G  L
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D    S LI  Y KC+ + +++ V  E+++K+ V  NA+         + EAL+LY T+ 
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            S ++ N  TF+ ++ A + +  L  G+  H   +K   D   FV +A++DMY KCG+IE
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 493

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A++ F       +  WN+M+  +AQHG   E   +F +M K G++P+ +T++AVL++C 
Sbjct: 494 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 553

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAG V +   + + M    G+ P  EHYAC+V LLGR G L  AK  I++MPI P A +W
Sbjct: 554 HAGXVEDGLNHFNSMPGF-GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVW 612

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLLSAC I GN++LG  A    +   P +  +Y+LLSN++AS GMW DV K+R  M   
Sbjct: 613 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSS 672

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + KEPG SWI V    + F A  ++H ++  I   L  L +H+
Sbjct: 673 EVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHI 716



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 259/509 (50%), Gaps = 17/509 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           Q++  ++++G   D  + T+LI  ++K  B   A R +FD    +  +T+  +I+G  + 
Sbjct: 58  QLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVA-RLVFDQLLEKTAVTWTTIIAGYTKC 116

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
            +S  +L+LF ++R   + PD +  SS++ AC     L+  + +H   L+ G    V +V
Sbjct: 117 GRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 176

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGL 175
           +  I+ Y K   + +    F   +  + +++T M+ GY+ N  FD ++ ++F EM  LG 
Sbjct: 177 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNS-FDWEAMKLFGEMNRLGW 235

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + + F+ T+VL   G+   +++G Q+H + +K    S     + N ++++Y +     DA
Sbjct: 236 KPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESN--EFVKNGLIDMYAKSNLLXDA 293

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD + E +V+S++  I          EA  LF ++R   F  +  T ++LL      
Sbjct: 294 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASL 353

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   KQI     K G    +  G+ALI +Y KC  V DAR +F+ +  KD V WN+M 
Sbjct: 354 FALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMF 413

Query: 350 AGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            GY+++    +AL ++   L+FS   PN +T A+++ A SN  SL+   Q H+ ++K G 
Sbjct: 414 FGYTQHLENEEALKLYS-TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGL 472

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + + L+  Y KC ++ E++++ +    ++ V  N++ S         EAL ++R 
Sbjct: 473 DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFRE 532

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +     + N  TF  VL AC+    +E G
Sbjct: 533 MMKEGIQPNYVTFVAVLSACSHAGXVEDG 561



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 136/265 (51%), Gaps = 19/265 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+ L+IK G  LD    + LI  ++K +  + A R +F+  N +DI+ +NA+  G  + 
Sbjct: 361 QIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDA-RHVFEEMNEKDIVVWNAMFFGYTQH 419

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            ++  ALKL+  L++   +P+ FTF++L+ A     SL+  +  H   +K+G     ++ 
Sbjct: 420 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 479

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK G I  A   F   +  D V + +M+  +  +GE +++  +F EM   G++
Sbjct: 480 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 539

Query: 177 LNEFSLTAVLGA---SFDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            N  +  AVL A   +  V++G      + GFG+K G     C      +++L  R G+ 
Sbjct: 540 PNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYAC------VVSLLGRSGKL 593

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A +  +++  EP  + W   ++A
Sbjct: 594 FEAKEFIEKMPIEPAAIVWRSLLSA 618


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/567 (34%), Positives = 340/567 (59%), Gaps = 6/567 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +++G ++H   +K G       +L N ++++Y +CG   DA ++FD I + ++VSW+  I
Sbjct: 63  LEQGREVHAAILKSGIQPN--RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMI 120

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
            A   G   +EAF  ++ ++    + ++ T ++LL++     +L+ G+++     + G  
Sbjct: 121 EAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE 180

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               +G +L+ MY KCG ++ AR IFD L  K+ V+W  +IAGY++ G  + AL++   M
Sbjct: 181 LEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM 240

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            +  + PN  T ASIL+  +   +L+   +VH +II+SG+  +  +++ LIT Y KC  L
Sbjct: 241 QQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGL 300

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E++++ S++  ++ V   A+ +       H EA+ L+R +     + +  TF+ VL +C
Sbjct: 301 EEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSC 360

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           ++   L++GK IH   + A Y+ D++++SA++ MY KCG+++DA   F ++   ++  W 
Sbjct: 361 SSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWT 420

Query: 549 AMMMGY-AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           A++ G  AQHG   E    F++M K G+KPD++T+ +VL++C H GLV E R +   M  
Sbjct: 421 AIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYL 480

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            +G+ P +EHY+C VDLLGR G LE A+  I  MP  P   +W +LLSAC ++ +++ G 
Sbjct: 481 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGE 540

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
            A   +L+L PD++  YV LS++YA+AG + D  K+R+ M+++ + KEPG SWI V G  
Sbjct: 541 RAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKV 600

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
           H F+  D SH +S++IY EL KL E +
Sbjct: 601 HVFHVEDKSHPESEQIYVELGKLTEQI 627



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 202/400 (50%), Gaps = 4/400 (1%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA G+   +     ++       LL      R L  G+++ A   K G      + N L+
Sbjct: 30  EALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 89

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           SMY KCG + DAR +FD +  ++ VSW +MI  +       +A   +  M      P+  
Sbjct: 90  SMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKV 149

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  S+L A +N + L+   +VH  I+++G  L+  + + L+  Y KC  +++++ +   +
Sbjct: 150 TFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRL 209

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            +KN V    L +          ALEL  T+  +    N  TF+ +L+ C     LE GK
Sbjct: 210 PEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGK 269

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            +H   +++ Y ++++V +++I MYCKCG +E+A++ F  +    +  W AM+ GYAQ G
Sbjct: 270 KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEH 617
            + E  NLF +M + G+KPD++T+ +VLTSC     ++E  R +   +   + L   L+ 
Sbjct: 330 FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ- 388

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            + +V +  + G ++ A +  +QM    +   W ++++ C
Sbjct: 389 -SALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 251/491 (51%), Gaps = 20/491 (4%)

Query: 59  FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSR 112
            C++G    AL + + +  QG R  +  F  L++ C    SL++   VH   LK G    
Sbjct: 22  LCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 81

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            YL +  +  YAK G +  A   F    D + V++TAM+  +V   +  ++ + +  M+ 
Sbjct: 82  RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G + ++ +  ++L A  +   ++ G+++H   V+ G    +   +  +++ +Y +CG  
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGL--ELEPRVGTSLVGMYAKCGDI 199

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +FD + E +VV+W+  IA      +   A  L + ++  +   N+ T  ++L   
Sbjct: 200 SKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGC 259

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GK++  +  + G+   + + N+LI+MY KCG + +AR +F  L  +D V+W 
Sbjct: 260 TTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWT 319

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M+ GY++ GF ++A+++F  M +  + P+  T  S+L + S+   L++  ++H  ++ +
Sbjct: 320 AMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHA 379

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS--VLVYASCHAEALE 464
           G+ LD  + S L++ Y KC +++++  V +++ ++N V   A+ +     +  C  EALE
Sbjct: 380 GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCR-EALE 438

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDM 522
            +  +     + +  TF+ VL AC  +  +E+G+  H  ++   Y     VE  S  +D+
Sbjct: 439 YFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDL 497

Query: 523 YCKCGTIEDAK 533
             + G +E+A+
Sbjct: 498 LGRAGHLEEAE 508



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 132/605 (21%), Positives = 278/605 (45%), Gaps = 59/605 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ ++K+G   +  L  TL+S + K      A R     ++R+I+++ A+I       
Sbjct: 68  EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGN 127

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A K ++ ++  G +PD  TF SL+ A  +   LQ  + VH   ++ G      + +
Sbjct: 128 KNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGT 187

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G+I  A + F    + + V +T ++ GY   G+ D + E+   M+   +  
Sbjct: 188 SLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAP 247

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+ +  ++L        ++ G+++H + ++ G+  G    + N+++ +Y +CG   +A K
Sbjct: 248 NKITFASILQGCTTPAALEHGKKVHRYIIQSGY--GRELWVVNSLITMYCKCGGLEEARK 305

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   DVV+W+  +          EA  LF+ ++    + ++ T  ++L+S      
Sbjct: 306 LFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAF 365

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ GK+I       G+   V + +AL+SMY KCG ++DA  +F+ +  ++ V+W ++I G
Sbjct: 366 LQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITG 425

Query: 352 -YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFL 409
             +++G   +AL+ F  M +  + P+  T  S+L A ++   +++  +   S  +  G  
Sbjct: 426 CCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIK 485

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                 SC +   G+   L E++ V+             L+   +             ++
Sbjct: 486 PMVEHYSCFVDLLGRAGHLEEAENVI-------------LSMPFIPGP----------SV 522

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD-IFVESAVIDMYCKCGT 528
           WG+           +L AC   +D+E+G+      LK   D D  +V  A+  +Y   G 
Sbjct: 523 WGA-----------LLSACRVHSDVERGERAAENVLKLDPDDDGAYV--ALSSIYAAAGR 569

Query: 529 IEDAKRAF-----RKICRDSLAGW----NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
            EDA++       R + ++    W      + + + +   + E   ++ ++ K   +  E
Sbjct: 570 YEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKE 629

Query: 580 ITYLA 584
           + Y+ 
Sbjct: 630 MGYVP 634



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 6/249 (2%)

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           SVL       EAL +  T+      V    F  +L+ CA +  LEQG+ +H   LK+   
Sbjct: 20  SVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQ 79

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            + ++E+ ++ MY KCG++ DA+R F  I   ++  W AM+  +       E    +  M
Sbjct: 80  PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETM 139

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVR-EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
              G KPD++T++++L +  +  L++   + ++  +     L P++     +V +  + G
Sbjct: 140 KLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCG 197

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLL 687
            +  A++  D++P   +   W  L++     G +D  L LL   +  E+ P+  +   +L
Sbjct: 198 DISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL 256

Query: 688 SNLYASAGM 696
                 A +
Sbjct: 257 QGCTTPAAL 265


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 251/763 (32%), Positives = 396/763 (51%), Gaps = 29/763 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRF--------LFDTQNRDIITYNALISGLARFCQSGPALK 67
           IL    I   T  + FRR + +        +F   ++++ T N+ I  L +      AL+
Sbjct: 86  ILLFKYIISMTIHSVFRRMYSYVKPSLQPAIFSNLSKELPT-NSYIIFLCKQHHYKEALE 144

Query: 68  LFD-RLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
            FD  L+      +  T++SLV AC    SL   + +H   LK  +   + L +  I  Y
Sbjct: 145 AFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMY 204

Query: 124 AKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
            K G +  A   F D + L NV ++T+M+ GY  NG+ + +  ++++M   G   ++ + 
Sbjct: 205 GKCGSMKDARKVF-DTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTF 263

Query: 183 TAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFD 237
            +V+ A +   D+  G Q+H   +K  F     +HL   NA++++Y   GQ   A  +F 
Sbjct: 264 GSVIKACYIAGDIDLGRQLHAHVIKSWF----GHHLTSQNALISMYTNFGQIEHASNVFT 319

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILR 293
            I   D++SW   I         VEA  LF+DL R   +Q NE+   ++ S+      L 
Sbjct: 320 RIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELE 379

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            GKQ+   C K G    V  G +L  MY K G +  A+  F  +   D VSWN++IA ++
Sbjct: 380 YGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA 439

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG  N+A+D F  M+   L P+  T  S+L    +   L Q  Q+HS+I+K GF  + +
Sbjct: 440 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEIT 499

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKK-NAVHINALASVLVYASCHAEALELYRTIWGS 472
           + + L+T Y KC+ L+++  V  +I +  N V  NA+ S  +      E   LY+ +  S
Sbjct: 500 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS 559

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + +  T + +L  CA +T L  G  +HC ++K+    D+ V + +IDMY KCG+++ A
Sbjct: 560 GNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHA 619

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +  F       +  W+++++GYAQ G  HE  NLF  M+  GV+P+E+TYL  L++C H 
Sbjct: 620 RDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHI 679

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GLV E       M   HG+ P  EH++CIVDLL R G L  A+  I +  +  D   W++
Sbjct: 680 GLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKT 739

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL+AC  + N+D+       +L+L P N +  V+L N++ASAG W +V KLRK MK+  +
Sbjct: 740 LLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGV 799

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            K PG SWI V    H F++ DSSH Q   IY  L +L+  ++
Sbjct: 800 QKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVL 842



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 281/575 (48%), Gaps = 25/575 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I+  ++K+ +    IL   +I+ + K    + A R +FDT Q  +++++ ++ISG ++ 
Sbjct: 180 KIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDA-RKVFDTMQLPNVVSWTSMISGYSQN 238

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            Q+  A+ ++ ++   G  PD  TF S++KAC   G +     +H   +K  F   +   
Sbjct: 239 GQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQ 298

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
           +  I  Y   G+I  A   F      D +++  M+ GY+  G   ++  +F ++   G  
Sbjct: 299 NALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTY 358

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NEF   +V  A     +++ G+Q+HG  VK G    V      ++ ++Y + G    A
Sbjct: 359 QPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNV--FAGCSLCDMYAKFGFLPSA 416

Query: 233 VKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F +I  PD+VSW+  IAA     D  EA   F+ +       +  T I+LL + G  
Sbjct: 417 KMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSP 476

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWNSM 348
             L  G+QI ++  K+GF + +++ N+L++MY KC  ++DA ++F D     + VSWN++
Sbjct: 477 VRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAI 536

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++   +     +   ++  M      P+  T+ ++L   +   SL    QVH + IKSG 
Sbjct: 537 LSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGL 596

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV-YASCHA--EALEL 465
           +LD S+ + LI  Y KC +L  ++ V    D    + I + +S++V YA C    EAL L
Sbjct: 597 ILDVSVCNGLIDMYAKCGSLKHARDVF---DSTQNLDIVSWSSLIVGYAQCGLGHEALNL 653

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMY 523
           +R +     + N  T+   L AC+ +  +E+G  ++  +++  +      E  S ++D+ 
Sbjct: 654 FRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLY-KSMETEHGIPPTREHFSCIVDLL 712

Query: 524 CKCGTIEDAKRAFRKICRDS-LAGWNAMMMGYAQH 557
            + G + +A+   +K   D+ +  W  ++     H
Sbjct: 713 ARAGCLHEAETFIQKSGLDADITAWKTLLAACKTH 747


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/713 (31%), Positives = 379/713 (53%), Gaps = 13/713 (1%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----V 100
           D++++N+LISG  +      ++ +F ++R  G+  D  T +  +K C SL E+++    +
Sbjct: 121 DVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKIC-SLLEDQVLGIQI 179

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           HG+ +++GF   V   S  ++ YAK   +  +   F +  D + ++++A + G V N + 
Sbjct: 180 HGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQL 239

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNN 217
            +  ++F EM+  G+ +++ +  +V  +   +   + G Q+H   +K  F S V   +  
Sbjct: 240 LRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVI--VGT 297

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI 274
           A +++Y +C    DA K+F  + + ++ S++  I   A    G +AF LF  L+ N F  
Sbjct: 298 ATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSF 357

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +E ++   LS+    +    G Q+     K      + + NA++ MYGKCG + +A  +F
Sbjct: 358 DEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLF 417

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           D +  +D VSWN++I    +N    + L  F  ML   + P+ +T  S+L+A +  ++  
Sbjct: 418 DEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFS 477

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             M+VH  IIKSG  L   + S L+  Y KC  + E++++   ++++  V  NA+ S   
Sbjct: 478 NGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFS 537

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 ++   +  +     E +  T++ VL  CA +  +  GK IH   +K     D++
Sbjct: 538 LQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVY 597

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           + S ++DMY KCG + D+   FRK  +     WNAM+ G+A HG   E   LF  M    
Sbjct: 598 ITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHEN 657

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           +KP+  T+++VL +C H G  ++   Y   M+ ++ L PQLEHY+C+VD+LGR G +E A
Sbjct: 658 IKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEA 717

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              I  MP   DA IW++LLS C I GN+++   A S LL+L P++ S Y LLSN+YA A
Sbjct: 718 LRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADA 777

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           GMW  V K+R+ M+   L KEPG SWI V    H F   D +H + + IY  L
Sbjct: 778 GMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLL 830



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 281/554 (50%), Gaps = 22/554 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ + ++ G   D +  + L+  + K      +     +  +++ I+++A I+G  +  
Sbjct: 178 QIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQND 237

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           Q    LKLF  ++ +G+     T++S+ ++C  L  + +   +H   LK  F S V + +
Sbjct: 238 QLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGT 297

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +  A   F    D +  +Y AM+ GY  N +  ++ ++F++++      
Sbjct: 298 ATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSF 357

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+  L A+  +K   EG Q+HG  +K    S +C  + NAI+++Y +CG  ++A  
Sbjct: 358 DEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNIC--VANAILDMYGKCGALVEASG 415

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGL----FKDLRFNDFQINEYTMINLLSSVGGER 290
           +FDE+   D VSW+  I  AC+  E+ G     F  +  +  + +E+T  ++L +  G+R
Sbjct: 416 LFDEMEIRDPVSWNA-IITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQR 474

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G ++     K G    + +G+AL+ MY KCG + +A  I   L  +  VSWN++I+
Sbjct: 475 AFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIIS 534

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+S       +   F HMLE  + P+ +T A++L+  +N  ++    Q+H+ +IK   L 
Sbjct: 535 GFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLS 594

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + S L+  Y KC  +++S  +  +  K+++V  NA+     Y     EALEL+  + 
Sbjct: 595 DVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHML 654

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALKARYDQDIFVESAVIDMYCK 525
               + N +TF  VL+AC+ + + ++G     K     AL+ + +      S ++D+  +
Sbjct: 655 HENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEH----YSCMVDILGR 710

Query: 526 CGTIEDAKRAFRKI 539
            G +E+A R  + +
Sbjct: 711 SGQVEEALRLIQDM 724



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 192/418 (45%), Gaps = 46/418 (11%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  ++       R L+ GK+  A     GF   V + N LI MY KC  +  A  +F+ +
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 338 IFKDSVSWNSM--------------------------------IAGYSENGFFNQALDMF 365
             +D VSWN+M                                I+GY +NG   +++ +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M +  ++ +  T+A  L+  S  +     +Q+H   ++ GF  D    S L+  Y KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
           N+L +S  V SE+  KN +  +A  +  V        L+L++ +      V+ ST++ V 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           ++CA ++    G  +HC ALK  +  D+ V +A +DMY KC  + DA + F  +   +L 
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            +NAM++GYA++    +   LF ++ K     DE++    L++   A +++     L   
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSA---AAVIKGHSEGL--- 379

Query: 606 SDLHGLI--PQLEHYAC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
             LHGL     L    C    I+D+ G+ G L  A    D+M I  D   W ++++AC
Sbjct: 380 -QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEI-RDPVSWNAIITAC 435



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 196/428 (45%), Gaps = 40/428 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L IK+    +  ++  ++  + K      A     + + RD +++NA+I+   +  
Sbjct: 380 QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNE 439

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
             G  L  F  +    + PD FT+ S++KAC    +      VHG  +K G   ++++ S
Sbjct: 440 SEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGS 499

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G +  AE       +   V++ A++ G+    + + S+  F  M  +G+E 
Sbjct: 500 ALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEP 559

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+   VL    +   V  G+QIH   +K+  LS V  ++ + ++++Y +CG   D++ 
Sbjct: 560 DNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDV--YITSTLVDMYSKCGNMHDSLL 617

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           MF +  + D V+W+  I   A    G EA  LF+ +   + + N  T +++L +      
Sbjct: 618 MFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACS---- 673

Query: 292 LRAGKQIQAFCYKVGFMEVVSI---------GNALISMYGKCGQVNDA-RSIFDYLIFKD 341
              G   +   Y   F ++ SI          + ++ + G+ GQV +A R I D     D
Sbjct: 674 -HVGNAKKGLFY---FQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEAD 729

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
           ++ W ++++     G    A      +L+        ++L+ N Y  A + + VS    +
Sbjct: 730 AIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSK---I 786

Query: 394 KQAMQVHS 401
           +Q M+ H+
Sbjct: 787 RQTMRSHN 794


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/702 (33%), Positives = 397/702 (56%), Gaps = 18/702 (2%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A    D +  Q   PD  T+S L+K+C    + Q  ++VH   ++ G      +++  I 
Sbjct: 28  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87

Query: 122 NYAKSGEIVSAEMCFRDCLD-LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
            Y+K G+  +A + F    +  D V+++AMV  +  N    ++   F++M  LG   NE+
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSG-VCNHLNNAIMNLYVRCGQKL-DAVKM 235
              AV+ A  +      GE I+GF VK G+L   VC  +   +++++V+    L  A K+
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC--VGCELIDMFVKGSGDLGSAYKV 205

Query: 236 FDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD++ E ++V+W+    R A      +A  LF D+  + +  + +T  ++LS+     +L
Sbjct: 206 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 265

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWNSMI 349
             GKQ+ +   ++G    V +G +L+ MY KC   G V+D+R +F+ +   + +SW ++I
Sbjct: 266 ALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 325

Query: 350 AGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
             Y ++G  + +A+++FC M+   + PN ++ +S+L+A  N        QV+S+ +K G 
Sbjct: 326 TAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGI 385

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              + + + LI+ Y +   + ++++    + +KN V  NA+           EA  L+  
Sbjct: 386 ASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE 445

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I  +   ++  TF+ +L   A++  + +G+ IH   LK  Y  +  + +A+I MY +CG 
Sbjct: 446 IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 505

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           IE A + F ++   ++  W +M+ G+A+HG       +F+KM + G KP+EITY+AVL++
Sbjct: 506 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 565

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H G++ E + + + M   HG++P++EHYAC+VDLLGR GLL  A   I+ MP+  DA 
Sbjct: 566 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 625

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++LL AC ++GN +LG  A   +LE +PD+ + Y+LLSNL+ASAG W DV K+RK MK
Sbjct: 626 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 685

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           E+ L KE G SWI V    H F+ G++SH Q+ +IY+EL +L
Sbjct: 686 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQL 727



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 253/495 (51%), Gaps = 38/495 (7%)

Query: 2   IYSLLIKNGH-HLDPILSTTLISHFTKFA-DFRRAFRFLFDTQNRDIITYNALISGLARF 59
           IY  ++K G+   D  +   LI  F K + D   A++       R+++T+  +I+  A+ 
Sbjct: 168 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 227

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             +  A+ LF  +   G  PD FT+SS++ AC   G L   + +H   ++LG +  V + 
Sbjct: 228 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 287

Query: 117 SGFIENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEMRS 172
              ++ YAK    G +  +   F    + + +++TA++  YV +GE DK   E+F +M S
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  N FS ++VL A  ++ +   GEQ++ + VK+G  S  C  + N+++++Y R G+ 
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC--VGNSLISMYARSGRM 405

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K FD + E ++VS++  +   A      EAF LF ++      I+ +T  +LLS  
Sbjct: 406 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 465

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G+QI     K G+     I NALISMY +CG +  A  +F+ +  ++ +SW 
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 525

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           SMI G++++GF  +AL+MF  MLE    PN  T  ++L A S+   + +  +  + + K 
Sbjct: 526 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 585

Query: 407 -GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G +      +C++   G+   L E+              IN++  +       A+AL +
Sbjct: 586 HGIVPRMEHYACMVDLLGRSGLLVEAMEF-----------INSMPLM-------ADAL-V 626

Query: 466 YRTIWGSCREVNGST 480
           +RT+ G+CR V+G+T
Sbjct: 627 WRTLLGACR-VHGNT 640



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+YS  +K G      +  +LIS + +     D R+AF  LF+   +++++YNA++ G A
Sbjct: 375 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE---KNLVSYNAIVDGYA 431

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVY 114
           +  +S  A  LF+ +   G+   AFTF+SL+    + G++ + E +HG  LK G+ S   
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y++ G I +A   F +  D + +++T+M+ G+  +G   ++ E+F +M   G
Sbjct: 492 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 551

Query: 175 LELNEFSLTAVLGA 188
            + NE +  AVL A
Sbjct: 552 TKPNEITYVAVLSA 565



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 146/315 (46%), Gaps = 8/315 (2%)

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  + A      M + +  P+  T + +L++    ++ +    VH  +++SG  LD  ++
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 416 SCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           + LI+ Y KC     ++ +   + +K++ V  +A+ S     S   +A+  +  +     
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCK-CGTIEDA 532
             N   F+ V++AC+       G+ I+   +K  Y + D+ V   +IDM+ K  G +  A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F K+   +L  W  M+  +AQ GC  +  +LF  M   G  PD  TY +VL++C   
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV---GLLEGAKMTIDQMPIPPDAHI 649
           GL+   +   S +  L GL   +     +VD+  +    G ++ ++   +QMP   +   
Sbjct: 263 GLLALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMS 320

Query: 650 WQSLLSACTIYGNID 664
           W ++++A    G  D
Sbjct: 321 WTAIITAYVQSGECD 335



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 55/91 (60%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  L+K G+  +  +   LIS +++  +   AF+   + ++R++I++ ++I+G A+  
Sbjct: 476 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 535

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL++F ++   G +P+  T+ +++ AC
Sbjct: 536 FATRALEMFHKMLETGTKPNEITYVAVLSAC 566


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/730 (31%), Positives = 399/730 (54%), Gaps = 12/730 (1%)

Query: 32  RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           RR F  + D  +   +++++L++  +       A++ F  +R +G+  + F    ++K  
Sbjct: 57  RRVFDEIPDPCH---VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCV 113

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAM 150
              +    VH + +  GF S V++ +  +  Y   G +  A   F +     N V++  +
Sbjct: 114 PDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGL 173

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGF 207
           +  YV N +   + +VF EM   G++  EF  + V+ A   S +++ G Q+H   V++G+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY 233

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLF 264
              V     NA++++Y++ G+   A  +F+++ + DVVSW+  I+    +G +  A  L 
Sbjct: 234 DKDVFT--ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
             ++++    N +T+ ++L +  G      G+QI  F  K        IG  L+ MY K 
Sbjct: 292 LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN 351

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             ++DAR +FD++  +D +  N++I+G S  G  ++AL +F  + +  L  N  T+A++L
Sbjct: 352 HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           ++ ++ ++     QVH+  +K GF+ D  +++ LI +Y KC+ L+++ RV  E    + +
Sbjct: 412 KSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDII 471

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              ++ + L        A++L+  +     E +    S +L ACA+++  EQGK +H   
Sbjct: 472 ACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHL 531

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K ++  D F  +A++  Y KCG+IEDA+ AF  +    +  W+AM+ G AQHG      
Sbjct: 532 IKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRAL 591

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF +M   G+ P+ IT  +VL +C HAGLV EA+ Y + M ++ G+    EHY+C++DL
Sbjct: 592 ELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDL 651

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR G L+ A   ++ MP   +A IW +LL A  ++ + +LG LA  KL  L+P+   T+
Sbjct: 652 LGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTH 711

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VLL+N YASAGMWN+V K+RK MK+  + KEP  SWI V    H F  GD SH  +KEIY
Sbjct: 712 VLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIY 771

Query: 745 KELIKLYEHM 754
            +L++L + M
Sbjct: 772 AKLVELGDLM 781



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 180/663 (27%), Positives = 315/663 (47%), Gaps = 70/663 (10%)

Query: 75  QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           Q L P A   +SL+K+ GSL               S R +L+S     Y+K      A  
Sbjct: 18  QALLPGAHLHASLLKS-GSLA--------------SFRNHLIS----FYSKCRRPCCARR 58

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            F +  D  +V+++++V  Y  NG    + + F  MR+ G+  NEF+L  VL    D + 
Sbjct: 59  VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL 118

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDVVSWSERIAA 253
           G Q+H   +  GF S V   + NA++ +Y   G   DA ++F+E  +E + VSW+  ++A
Sbjct: 119 GAQVHAMAMATGFGSDV--FVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176

Query: 254 AC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
                   D ++ FG   ++ ++  Q  E+    ++++  G R + AG+Q+ A   ++G+
Sbjct: 177 YVKNDQCGDAIQVFG---EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY 233

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
            + V   NAL+ MY K G+V+ A  IF+ +   D VSWN++I+G   NG  ++A+++   
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    L+PN +T++SIL+A S + +     Q+H  +IK+    DD +   L+  Y K + 
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L+++++V   +  ++ +  NAL S   +   H EAL L+  +      VN +T + VLK+
Sbjct: 354 LDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
            A++      + +H LA+K  +  D  V + +ID Y KC  + DA R F +     +   
Sbjct: 414 TASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIAC 473

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC-----------HAGLVR 596
            +M+   +Q         LF +M + G++PD     ++L +C            HA L++
Sbjct: 474 TSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             R +   MSD       +  YA       + G +E A++    +P       W +++  
Sbjct: 534 --RQF---MSDAFAGNALVYTYA-------KCGSIEDAELAFSSLP-ERGVVSWSAMIGG 580

Query: 657 CTIYGNIDLGLLAGSKLLEL------QPDNESTYVLLSNLYA--SAGMWNDVGKLRKEMK 708
              +G+       G + LEL      +  N +   + S L A   AG+ ++  +    MK
Sbjct: 581 LAQHGH-------GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMK 633

Query: 709 EKF 711
           E F
Sbjct: 634 EMF 636



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 230/449 (51%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++++++ G+  D   +  L+  + K      A        + D++++NALISG     
Sbjct: 223 QVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 282

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A++L  +++Y GL P+ FT SS++KAC   G+      +HG  +K    S  Y+  
Sbjct: 283 HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV 342

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G ++ YAK+  +  A   F      D +   A++ G    G  D++  +F E+R  GL +
Sbjct: 343 GLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGV 402

Query: 178 NEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +L AVL ++  ++      Q+H   VK+GF+     H+ N +++ Y +C    DA +
Sbjct: 403 NRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA--HVVNGLIDSYWKCSCLSDANR 460

Query: 235 MFDEITEPDVVSWSERIAA--ACD-GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+E +  D+++ +  I A   CD G  A  LF ++     + + + + +LL++      
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              GKQ+ A   K  FM     GNAL+  Y KCG + DA   F  L  +  VSW++MI G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            +++G   +AL++F  M++  + PN  TM S+L A +++  + +A + + + +K  F +D
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGID 639

Query: 412 --DSMISCLITTYGKCNALNESKRVLSEI 438
             +   SC+I   G+   L+++  +++ +
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSM 668



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 20/397 (5%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+   L+     + L  G  + A   K G   + S  N LIS Y KC +   AR +FD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEI 63

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
                VSW+S++  YS NG    A+  F  M    +  N + +  +L+ V ++   +   
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGA 120

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYA 456
           QVH+  + +GF  D  + + L+  YG    +++++RV +E D ++NAV  N L S  V  
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +A++++  +  S  +     FS V+ AC    ++E G+ +H + ++  YD+D+F  
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++DMY K G ++ A   F K+    +  WNA++ G   +G  H    L  +M   G+ 
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL----EHYACI--VDLLGRVGL 630
           P+  T  ++L +C  AG     R        +HG + +     + Y  +  VD+  +   
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGR-------QIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           L+ A+   D M    D  +  +L+S C+  G  D  L
Sbjct: 354 LDDARKVFDWM-FHRDLILCNALISGCSHGGRHDEAL 389


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/702 (33%), Positives = 397/702 (56%), Gaps = 18/702 (2%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A    D +  Q   PD  T+S L+K+C    + Q  ++VH   ++ G      +++  I 
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 122 NYAKSGEIVSAEMCFRDCLD-LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
            Y+K G+  +A + F    +  D V+++AMV  +  N    ++   F++M  LG   NE+
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSG-VCNHLNNAIMNLYVRCGQKL-DAVKM 235
              AV+ A  +      GE I+GF VK G+L   VC  +   +++++V+    L  A K+
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVC--VGCELIDMFVKGSGDLGSAYKV 187

Query: 236 FDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD++ E ++V+W+    R A      +A  LF D+  + +  + +T  ++LS+     +L
Sbjct: 188 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 247

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWNSMI 349
             GKQ+ +   ++G    V +G +L+ MY KC   G V+D+R +F+ +   + +SW ++I
Sbjct: 248 ALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 307

Query: 350 AGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
             Y ++G  + +A+++FC M+   + PN ++ +S+L+A  N        QV+S+ +K G 
Sbjct: 308 TAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGI 367

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              + + + LI+ Y +   + ++++    + +KN V  NA+           EA  L+  
Sbjct: 368 ASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE 427

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I  +   ++  TF+ +L   A++  + +G+ IH   LK  Y  +  + +A+I MY +CG 
Sbjct: 428 IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 487

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           IE A + F ++   ++  W +M+ G+A+HG       +F+KM + G KP+EITY+AVL++
Sbjct: 488 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 547

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H G++ E + + + M   HG++P++EHYAC+VDLLGR GLL  A   I+ MP+  DA 
Sbjct: 548 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 607

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++LL AC ++GN +LG  A   +LE +PD+ + Y+LLSNL+ASAG W DV K+RK MK
Sbjct: 608 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 667

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           E+ L KE G SWI V    H F+ G++SH Q+ +IY+EL +L
Sbjct: 668 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQL 709



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 253/495 (51%), Gaps = 38/495 (7%)

Query: 2   IYSLLIKNGH-HLDPILSTTLISHFTKFA-DFRRAFRFLFDTQNRDIITYNALISGLARF 59
           IY  ++K G+   D  +   LI  F K + D   A++       R+++T+  +I+  A+ 
Sbjct: 150 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 209

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             +  A+ LF  +   G  PD FT+SS++ AC   G L   + +H   ++LG +  V + 
Sbjct: 210 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 269

Query: 117 SGFIENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEMRS 172
              ++ YAK    G +  +   F    + + +++TA++  YV +GE DK   E+F +M S
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  N FS ++VL A  ++ +   GEQ++ + VK+G  S  C  + N+++++Y R G+ 
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC--VGNSLISMYARSGRM 387

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K FD + E ++VS++  +   A      EAF LF ++      I+ +T  +LLS  
Sbjct: 388 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 447

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G+QI     K G+     I NALISMY +CG +  A  +F+ +  ++ +SW 
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 507

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           SMI G++++GF  +AL+MF  MLE    PN  T  ++L A S+   + +  +  + + K 
Sbjct: 508 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 567

Query: 407 -GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G +      +C++   G+   L E+              IN++  +       A+AL +
Sbjct: 568 HGIVPRMEHYACMVDLLGRSGLLVEAMEF-----------INSMPLM-------ADAL-V 608

Query: 466 YRTIWGSCREVNGST 480
           +RT+ G+CR V+G+T
Sbjct: 609 WRTLLGACR-VHGNT 622



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+YS  +K G      +  +LIS + +     D R+AF  LF+   +++++YNA++ G A
Sbjct: 357 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE---KNLVSYNAIVDGYA 413

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVY 114
           +  +S  A  LF+ +   G+   AFTF+SL+    + G++ + E +HG  LK G+ S   
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y++ G I +A   F +  D + +++T+M+ G+  +G   ++ E+F +M   G
Sbjct: 474 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 533

Query: 175 LELNEFSLTAVLGA 188
            + NE +  AVL A
Sbjct: 534 TKPNEITYVAVLSA 547



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 146/315 (46%), Gaps = 8/315 (2%)

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  + A      M + +  P+  T + +L++    ++ +    VH  +++SG  LD  ++
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 416 SCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           + LI+ Y KC     ++ +   + +K++ V  +A+ S     S   +A+  +  +     
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCK-CGTIEDA 532
             N   F+ V++AC+       G+ I+   +K  Y + D+ V   +IDM+ K  G +  A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F K+   +L  W  M+  +AQ GC  +  +LF  M   G  PD  TY +VL++C   
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV---GLLEGAKMTIDQMPIPPDAHI 649
           GL+   +   S +  L GL   +     +VD+  +    G ++ ++   +QMP   +   
Sbjct: 245 GLLALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMS 302

Query: 650 WQSLLSACTIYGNID 664
           W ++++A    G  D
Sbjct: 303 WTAIITAYVQSGECD 317



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 55/91 (60%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  L+K G+  +  +   LIS +++  +   AF+   + ++R++I++ ++I+G A+  
Sbjct: 458 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 517

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL++F ++   G +P+  T+ +++ AC
Sbjct: 518 FATRALEMFHKMLETGTKPNEITYVAVLSAC 548


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/681 (33%), Positives = 374/681 (54%), Gaps = 17/681 (2%)

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQEN-----EIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
           L+   LRP    F++L++   S+  N     +I+HG  +  G  S  +L +  I   +KS
Sbjct: 40  LQIPNLRPKRREFANLLQL--SISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKS 97

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAV 185
             + +A + F      + + +++MV  Y   G  +++  VFV++ R  G   NEF L +V
Sbjct: 98  DRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASV 157

Query: 186 LGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           + A      V++G Q+HGF V+ GF   V  ++  ++++ Y + G   +A  +FD+++E 
Sbjct: 158 IRACTQLGVVEKGAQLHGFVVRSGFDQDV--YVGTSLIDFYSKNGNIEEARLVFDQLSEK 215

Query: 243 DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
             V+W+  IA          +  LF  +R  +   + Y + ++LS+      L  GKQI 
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 275

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A+  + G    VS+ N LI  Y KC +V   R +FD ++ K+ +SW +MI+GY +N F  
Sbjct: 276 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 335

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A+ +F  M      P+G+   S+L +  + ++L+Q  QVH++ IK+    D+ + + LI
Sbjct: 336 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 395

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y K N L ++K+V   + ++N +  NA+          +EALEL+  +    ++ N  
Sbjct: 396 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEF 455

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           TF+ ++ A + +  L  G+  H   +K   D   FV +A++DMY KCG+IE+A++ F   
Sbjct: 456 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 515

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
               +  WN+M+  +AQHG   E   +F +M K G++P+ +T++AVL++C HAG V +  
Sbjct: 516 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGL 575

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            + + M    G+ P  EHYAC+V LLGR G L  AK  I++MPI P A +W+SLLSAC I
Sbjct: 576 NHFNSMPGF-GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRI 634

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
            GN++LG  A    +   P +  +Y+LLSN++AS GMW DV K+R  M    + KEPG S
Sbjct: 635 AGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRS 694

Query: 720 WIHVGGYTHHFYAGDSSHSQS 740
           WI V    + F A D++H ++
Sbjct: 695 WIEVNNKVNVFIARDTTHREA 715



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 235/449 (52%), Gaps = 15/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++  ++++G   D  + T+LI  ++K  +   A R +FD    +  +T+  +I+G  + 
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIAGYTKC 230

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
            +S  +L+LF ++R   + PD +  SS++ AC     L+  + +H   L+ G    V +V
Sbjct: 231 GRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 290

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGL 175
           +  I+ Y K   + +    F   +  + +++T M+ GY+ N  FD ++ ++F EM  LG 
Sbjct: 291 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNS-FDWEAMKLFGEMNRLGW 349

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + + F+ T+VL   G+   +++G Q+H + +K    S     + N ++++Y +    +DA
Sbjct: 350 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESD--EFVKNGLIDMYAKSNLLIDA 407

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD + E +V+S++  I          EA  LF ++R    + NE+T   L+++    
Sbjct: 408 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNL 467

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             LR G+Q      K+G      + NAL+ MY KCG + +AR +F+  I++D V WNSMI
Sbjct: 468 ASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMI 527

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + ++++G   +AL MF  M++  + PN  T  ++L A S++  ++  +   + +   G  
Sbjct: 528 STHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIK 587

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
                 +C+++  G+   L E+K  + ++
Sbjct: 588 PGTEHYACVVSLLGRSGKLFEAKEFIEKM 616


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 233/724 (32%), Positives = 382/724 (52%), Gaps = 50/724 (6%)

Query: 78  RPDAFTFSSLV---KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           +PD  TF +++    +CG + E   +H       F     + +  I  Y K   +V A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 135 CFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
            F   D    + V++ AM+  Y  NG   ++  ++  M   GL  +  +  +VLGA   +
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 193 KEGEQIHGFGVKVGFLSGV--CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            +G +IH    +V F SG+     L NA++ +Y R G   DA +MF  +   D  SW+  
Sbjct: 124 AQGREIHN---RV-FYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I A   + D   A  +FK+++  D + N  T IN++S      +L  G++I A     GF
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              + +  ALI+MYGKCG  ++AR +FD +  +D VSWN MI  Y +NG F++AL+++  
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           +          T  SIL A S+ K+L Q   VHSHI++ G   + ++ + L+  Y KC +
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 428 LNESKRVLSEIDKKNAVHI----------------------------------NALASVL 453
           L E+++V + +  ++AV                                    NA+ +  
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTY 418

Query: 454 VYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           V   C   A++++R + G+   + +  TF  VL+ACA++  L + KA+H    ++  + +
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESN 478

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V + +I+MY +CG++E+A+R F      ++  W AM+  ++Q+G Y E  +LF +M  
Sbjct: 479 VVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDL 538

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GVKPD++TY ++L  C H G + +   Y + M++LHGL P  +H+A +VDLLGR G L 
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLF 598

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            AK  ++ MP  PD   W + L+AC I+G ++LG  A  ++ EL P + + Y+ +SN+YA
Sbjct: 599 DAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYA 658

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + GMW  V  +RK+M+E+ L K PG S+I V G  H F +G   H ++ EI +EL +L+ 
Sbjct: 659 AHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHG 718

Query: 753 HMVA 756
            M A
Sbjct: 719 LMRA 722



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 161/648 (24%), Positives = 297/648 (45%), Gaps = 94/648 (14%)

Query: 14  DPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           D ++   LIS + K     D R  F  + D + R+++++NA+I+  A+   S  AL L+ 
Sbjct: 41  DTMVGNALISMYGKCDSLVDARSVFESM-DWRQRNVVSWNAMIAAYAQNGHSTEALVLYW 99

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           R+  QGL  D  TF S++ AC SL +   +H      G  S   L +  +  YA+ G + 
Sbjct: 100 RMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVG 159

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A+  F+     D  ++ A++  +  +G++  +  +F EM+      +   +  + G S 
Sbjct: 160 DAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFST 219

Query: 191 D--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
              + EG +IH   V  GF S +   +  A++N+Y +CG   +A ++FD++ + D+VSW+
Sbjct: 220 PEVLPEGRKIHAEIVANGFDSDLV--VATALINMYGKCGSSHEAREVFDKMKKRDMVSWN 277

Query: 249 ERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I       D  EA  L++ L    F+  + T +++L +    + L  G+ + +   + 
Sbjct: 278 VMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER 337

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF-------- 357
           G    V++  AL++MY KCG + +AR +F+ +  +D+V+W+++I  Y+ NG+        
Sbjct: 338 GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKAR 397

Query: 358 --FNQ------------------------ALDMFCHMLEFS-LIPNGYTMASILEAVSNS 390
             F++                        A+ +F  M   + L P+  T  ++LEA ++ 
Sbjct: 398 KVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASL 457

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             L +   +H+ I +S    +  + + LI  Y +C +L E++R+ +   +K  V   A+ 
Sbjct: 458 GRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV 517

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-------KAIHCL 503
           +       +AEAL+L++ +     + +  T++ +L  C     LEQG         +H L
Sbjct: 518 AAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGL 577

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKR---------------AFRKICR------- 541
           A  A    D F  +A++D+  + G + DAK                 F   CR       
Sbjct: 578 APTA----DHF--AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLEL 631

Query: 542 -------------DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
                         S A + AM   YA HG + +V+++  KM + G+K
Sbjct: 632 GEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLK 679



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 46/394 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ ++ NG   D +++T LI+ + K      A       + RD++++N +I    +  
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNG 287

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL+L+ +L  +G +    TF S++ AC S   L +  +VH   L+ G  S V + +
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347

Query: 118 GFIENYAKSGEIVSAEMCF-----RDCL-----------------------------DLD 143
             +  YAK G +  A   F     RD +                               D
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDVKEGEQIHGFG 202
            + + AM+  YV NG    + ++F EM  + GL+ +  +  AVL A   +    ++    
Sbjct: 408 TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467

Query: 203 VKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GV 258
            ++       N  + N ++N+Y RCG   +A ++F    E  VVSW+  +AA        
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527

Query: 259 EAFGLFKDLRFNDFQINE--YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
           EA  LF+++     + ++  YT I  + + GG  + +  +         G         A
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVCTHGGS-LEQGWRYFTDMAELHGLAPTADHFAA 586

Query: 317 LISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           ++ + G+ G++ DA+ + + + F+ D V+W + +
Sbjct: 587 MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFL 620



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 13/217 (5%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           R+ +  TF  VL +C++  D+ +G+A+H     +R+++D  V +A+I MY KC ++ DA+
Sbjct: 3   RQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62

Query: 534 RAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
             F  +   + ++  WNAM+  YAQ+G   E   L+ +M+  G+  D +T+++VL +C  
Sbjct: 63  SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122

Query: 592 AGLVREA--RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
               RE   R + S +     L   L      V +  R G +  AK     +    D   
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANAL------VTMYARFGSVGDAKRMFQSLQT-RDETS 175

Query: 650 WQSLLSACTIYGNIDLGLLAGSKL-LELQPDNESTYV 685
           W +++ A +  G+    L    ++  +++P N +TY+
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKCDMKP-NSTTYI 211


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 241/760 (31%), Positives = 393/760 (51%), Gaps = 69/760 (9%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD------ 70
           ++  LI  + K +D   AF+       RD +++NA++ G A     G A KLFD      
Sbjct: 79  VTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138

Query: 71  ---------RLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSG 118
                    R+   G   D  TF+ ++K+C SL+++     +HG+ +K+GF   V   S 
Sbjct: 139 CGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 198

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK                          C  V N +     E+F EM+  G+   
Sbjct: 199 LLDMYAK-------------------------CC--VQNDDLRGGLELFKEMQKAGV--- 228

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFD 237
                   GA        Q+HG  +K  F + V   +  A +++Y++C    D + ++F+
Sbjct: 229 --------GAL-------QLHGHALKTDFGTDVV--IGTATLDMYMKCNNLSDCSNQLFN 271

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   ++ S++  I   A +  G+EA G+F+ L+ +   ++E ++     +    +    
Sbjct: 272 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE 331

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G Q+     K      + + NA++ MYGKCG + +A  +F+ ++ +D+VSWN++IA + +
Sbjct: 332 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 391

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG   + L +F  ML+  + P+ +T  S+L+A +  ++L   M++H+ IIKS   LD  +
Sbjct: 392 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFV 451

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
              LI  Y KC  + +++++   + ++  V  NA+ S         EA + +  +     
Sbjct: 452 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 511

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + +  T++ +L  CA +  +E GK IH   +K     D ++ S ++DMY KCG ++D + 
Sbjct: 512 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQL 571

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F K        WNAM+ GYAQHG   E   +F  M    VKP+  T+LAVL +C H GL
Sbjct: 572 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 631

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V +   Y   M   +GL PQLEHY+C+VD++GR G +  A   I+ MP   DA IW++LL
Sbjct: 632 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 691

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           S C I+GN+++   A   +L+L+P++ + YVLLSN+YA+AGMWN+V KLRK M+   L K
Sbjct: 692 SXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKK 751

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           EPG SWI +    H F  GD +H +SKEIY+ L  L + M
Sbjct: 752 EPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEM 791



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 153/617 (24%), Positives = 267/617 (43%), Gaps = 85/617 (13%)

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           YQ       TFS + + C    +L   +  H   +   F   V++ +  I+ Y K  ++ 
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLG 94

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG---LELNEFSLTAVLG 187
            A   F      D V++ AM+ GY   G+   ++++F  M   G   +EL +F +   +G
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRM-GRMG 153

Query: 188 ASFDVKE----------------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             FD                   G QIHG  VK+GF   V     +A++++Y +C  + D
Sbjct: 154 TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT--GSALLDMYAKCCVQND 211

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            ++                      G+E   LFK+++               + VG    
Sbjct: 212 DLR---------------------GGLE---LFKEMQ--------------KAGVG---- 229

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND-ARSIFDYLIFKDSVSWNSMIA 350
                Q+     K  F   V IG A + MY KC  ++D +  +F+ L   +  S+N++I 
Sbjct: 230 ---ALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIV 286

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+ +    +AL MF  + +  L  +  +++    A +  K   + +QVH   +KS    
Sbjct: 287 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQS 346

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + + ++  YGKC AL E+  V  E+  ++AV  NA+ +         + L L+  + 
Sbjct: 347 NICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWML 406

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            S  E +  T+  VLKACA    L  G  IH   +K+R   D FV  A+IDMY KCG +E
Sbjct: 407 QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMME 466

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A++   ++   ++  WNA++ G++      E    F+KM + GV PD  TY  +L +C 
Sbjct: 467 KAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCA 526

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +   V   +        +H  I + E        + +VD+  + G ++  ++  ++ P  
Sbjct: 527 NLVTVELGK-------QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP-N 578

Query: 645 PDAHIWQSLLSACTIYG 661
            D   W +++     +G
Sbjct: 579 RDFVTWNAMVCGYAQHG 595



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 218/447 (48%), Gaps = 15/447 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++   +K     D ++ T  +  + K  +       LF++  N ++ +YNA+I G AR 
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLV 116
            +   AL +F  L+  GL  D  + S   +AC  ++   E   VHG+ +K    S + + 
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 351

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K G +V A + F + +  D V++ A++  +  NG  +K+  +FV M   G+E
Sbjct: 352 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 411

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +EF+  +VL A    +    G +IH   +K     G+ + +  A++++Y +CG    A 
Sbjct: 412 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRM--GLDSFVGIALIDMYSKCGMMEKAE 469

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+ D + E  VVSW+  I+         EA   F  +       + +T   +L +     
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 529

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  GKQI A   K        I + L+ MY KCG + D + IF+    +D V+WN+M+ 
Sbjct: 530 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 589

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+++G   +AL +F +M   ++ PN  T  ++L A  +   +++ +  + H + S + L
Sbjct: 590 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH-YFHSMLSNYGL 648

Query: 411 DDSM--ISCLITTYGKCNALNESKRVL 435
           D  +   SC++   G+   ++++  ++
Sbjct: 649 DPQLEHYSCVVDIMGRSGQVSKALELI 675



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 217/507 (42%), Gaps = 91/507 (17%)

Query: 264 FKDLRFNDFQ------INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           FK L  + F         + T  ++       + L  GKQ  A      F   V + N L
Sbjct: 24  FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCL 83

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF-------CHMLE 370
           I MY KC  +  A  +FD +  +D+VSWN+M+ GY+  G    A  +F       C ++E
Sbjct: 84  IQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVE 143

Query: 371 F--------SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
                      + +  T A +L++ S+ +     +Q+H   +K GF  D    S L+  Y
Sbjct: 144 LFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 203

Query: 423 GKCNALNESKR----VLSEIDKKNA----VHINAL------------ASVLVYASCH--- 459
            KC   N+  R    +  E+ K       +H +AL            A++ +Y  C+   
Sbjct: 204 AKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS 263

Query: 460 -------------------------------AEALELYRTIWGSCREVNGSTFSIVLKAC 488
                                           EAL ++R +  S   ++  + S   +AC
Sbjct: 264 DCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRAC 323

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +    +G  +H L++K+    +I V +A++DMY KCG + +A   F ++       WN
Sbjct: 324 AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWN 383

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           A++  + Q+G   +  +LF  M + G++PDE TY +VL +C  AG        L+C  ++
Sbjct: 384 AIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC--AGW-----QALNCGMEI 436

Query: 609 HGLIPQ----LEHYACI--VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           H  I +    L+ +  I  +D+  + G++E A+   D++        W +++S  ++   
Sbjct: 437 HNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQ 495

Query: 663 IDLGLLAGSKLLEL--QPDNESTYVLL 687
            +      SK+LE+   PDN +   +L
Sbjct: 496 SEEAQKTFSKMLEMGVDPDNFTYATIL 522


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/761 (30%), Positives = 407/761 (53%), Gaps = 16/761 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+K+  HL   L+T L+  + K    + A +   +   R I T+NA++       
Sbjct: 67  QLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSG 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A++L+  +R  G+  DA TF S++KACG+L E+ +   +HGV +K GF   V++ +
Sbjct: 125 KYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
             I  Y K G++  A + F   +    D V++ +++  +V  G+  ++  +F  M+ +G+
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGV 244

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N ++  A L    D   VK G  IHG  +K    + V  ++ NA++ +Y +CG+  DA
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADV--YVANALIAMYAKCGRMEDA 302

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F  +   D VSW+  ++         +A   F+D++ +  + ++ +++NL+++ G  
Sbjct: 303 ERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRS 362

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK++ A+  + G    + IGN LI MY KC  V      F+ +  KD +SW ++I
Sbjct: 363 GNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTII 422

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           AGY++N    +A+++F  +    +  +   + S+L A S  KS     ++H ++ K   L
Sbjct: 423 AGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-L 481

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + ++  YG+    + ++R    I  K+ V   ++ +  V+     EALEL+ ++
Sbjct: 482 ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +  + +       L A A ++ L++GK IH   ++  +  +  + S+++DMY  CGT+
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E++++ F  + +  L  W +M+     HGC +E   LF KM+   V PD IT+LA+L +C
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYAC 661

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E + +   M   + L P  EHYAC+VDLL R   LE A   +  MPI P + +
Sbjct: 662 SHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEV 721

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC I+ N +LG LA  +LL+    N   Y L+SN++A+ G WNDV ++R  MK 
Sbjct: 722 WCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKG 781

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             L K PG SWI V    H F A D SH Q+ +IY +L + 
Sbjct: 782 NGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQF 822



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 18/274 (6%)

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           K+L Q  Q+H+ ++KS   L   + + L+  Y KC +L ++ +V  E+ ++     NA+ 
Sbjct: 60  KALPQGQQLHARLLKSH--LSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMM 117

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
              V +  + EA+ELY+ +      ++  TF  VLKAC A+ +   G  IH +A+K  + 
Sbjct: 118 GAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFG 177

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           + +FV +A+I MY KCG +  A+  F  I   ++    WN+++  +   G   E  +LF 
Sbjct: 178 EFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFR 237

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIV 622
           +M + GV  +  T++A L          E  +++     +HG   +  H+A       ++
Sbjct: 238 RMQEVGVASNTYTFVAALQGV-------EDPSFVKLGMGIHGAALKSNHFADVYVANALI 290

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +  + G +E A+     M +  D   W +LLS 
Sbjct: 291 AMYAKCGRMEDAERVFASM-LCRDYVSWNTLLSG 323



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 16/187 (8%)

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S++L  C A+  L QG+ +H   LK+      F+ + ++ MY KCG+++DA + F ++  
Sbjct: 50  SLLLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTE 107

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            ++  WNAMM  +   G Y E   L+ +M   GV  D  T+ +VL +C   G + E+R  
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKAC---GALGESRL- 163

Query: 602 LSCMSDLHGLIPQLEH----YAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLL 654
               +++HG+  +       + C  ++ + G+ G L GA++  D + +  +  + W S++
Sbjct: 164 ---GAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 655 SACTIYG 661
           SA    G
Sbjct: 221 SAHVTEG 227


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/743 (31%), Positives = 388/743 (52%), Gaps = 14/743 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           +++ L+++G   D  L  +L++ + K      A R +FD   +RD++ + A++S +    
Sbjct: 82  LHARLLRSGPRPDAFLHDSLLNMYCKCGRLADA-RSVFDGMPHRDVVAWTAMVSAITAAG 140

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +G AL+LF  +  +G+ P+ F  ++ +KAC     L     VH   +KL      Y+ S
Sbjct: 141 DAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSS 200

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +E Y   GE+  AE    D     +V++ A++  Y  +G++ K   VF ++   G E+
Sbjct: 201 SLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEI 260

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++++L  VL    ++   K G+ +HG  +K G  +     LNN ++ +Y +C    DA +
Sbjct: 261 SKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETD--RVLNNCLIEMYSKCLSAEDAYE 318

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  I EPDVV  S  I+         EAF +F  +     + N+YT + L         
Sbjct: 319 VFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGD 378

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +   + I A   K GF     + +A++ MY K G V DA   FD +   D  SWN++++G
Sbjct: 379 VNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSG 438

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +         L +F  ++   ++ N YT   IL   ++   L+   QVH+ ++KSGF  D
Sbjct: 439 FYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGD 498

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +   L+  Y +      ++ V   + +++      + S         +A+E +R++  
Sbjct: 499 YDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLR 558

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
             +  N +T +  L  C+ +  L  G  +H   +K+ ++  + V SA++DMY KCG + D
Sbjct: 559 ENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLAD 617

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F +     L  WN ++ GYAQHG  ++    F +M   G  PDEIT++ VL++C H
Sbjct: 618 AEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSH 677

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGL+ E R Y   +S ++G+ P LEHYAC+VD+L + G L  A+  I++MP+ PDA +W+
Sbjct: 678 AGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWK 737

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           ++L AC ++GNI++   A  KL E QPD+ S+ +LLSN+YA    WNDV KLR  + ++ 
Sbjct: 738 TILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRG 797

Query: 712 LCKEPGYSWIHVGGYTHHFYAGD 734
           + KEPG SWI + G  H F + D
Sbjct: 798 VKKEPGCSWIEINGKLHVFLSQD 820



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 281/603 (46%), Gaps = 24/603 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K     DP +S++L+  +    +   A R L D+  R  +++NAL++  AR  
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
                + +FD+L   G     +T  +++K C   G  +  + VHG+ +K G  +   L +
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNN 301

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             IE Y+K      A   F    + D V  + M+  +  +    ++ ++F++M  +G++ 
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKP 361

Query: 178 NEFS---LTAVLGASFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCGQKLDA 232
           N+++   L  V   + DV     IH   VK GF    GVC    +AI+ +YV+ G   DA
Sbjct: 362 NQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVC----DAIVGMYVKTGAVQDA 417

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +  FD +  PD+ SW+  ++    G        +FK+L       N+YT + +L      
Sbjct: 418 ILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSL 477

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             LR G Q+ A   K GF     +   L+ MY + G   +AR +FD L  +D  SW  ++
Sbjct: 478 MDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVM 537

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y++     +A++ F  ML  +  PN  T+A+ L   S+   L   +Q+HS+ IKSG+ 
Sbjct: 538 STYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGW- 596

Query: 410 LDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            + S++ S L+  Y KC  L +++ +  E D  + V  N +           +ALE ++ 
Sbjct: 597 -NSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQE 655

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKC 526
           +       +  TF  VL AC+    L++G+    L L + Y     +E  + ++D+  K 
Sbjct: 656 MIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKL-LSSVYGITPTLEHYACMVDILAKA 714

Query: 527 GTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           G + +A+    ++     A  W  ++     HG          K+  F  +PD+I+   +
Sbjct: 715 GKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKL--FESQPDDISSCIL 772

Query: 586 LTS 588
           L++
Sbjct: 773 LSN 775



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           LR    ++  Y     L      R LR GK + A   + G      + ++L++MY KCG+
Sbjct: 53  LRLRAEELRSYAAA--LQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGR 110

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + DARS+FD +  +D V+W +M++  +  G    AL +F  M E  ++PNG+ +A+ L+A
Sbjct: 111 LADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKA 170

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +    L    QVH+  +K   L D  + S L+  Y  C  ++ ++R L +   ++ V  
Sbjct: 171 CTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSW 230

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NAL +       +A+ + ++  +  S  E++  T   VLK C  +   + G+A+H L +K
Sbjct: 231 NALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIK 290

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
              + D  + + +I+MY KC + EDA   F +I    +   + M+  + +H    E  ++
Sbjct: 291 RGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDI 350

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREART-----YLSCMSDLHGLIPQLEHYACI 621
           F +MS  GVKP++ T++ +       G V   R+       S  S   G+         I
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDA------I 404

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL-ELQPDN 680
           V +  + G ++ A +  D M   PD   W +LLS      N + GL    +L+ E    N
Sbjct: 405 VGMYVKTGAVQDAILAFDLMQ-GPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLAN 463

Query: 681 ESTYV 685
           + TYV
Sbjct: 464 KYTYV 468



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 153/656 (23%), Positives = 282/656 (42%), Gaps = 53/656 (8%)

Query: 71  RLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           RLR + LR    ++++ ++ C +   L+  + +H   L+ G     +L    +  Y K G
Sbjct: 54  RLRAEELR----SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCG 109

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            +  A   F      D VA+TAMV      G+   +  +F EM   G+  N F+L A L 
Sbjct: 110 RLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALK 169

Query: 188 A---SFDVKEGEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVK-MFDEITEP 242
           A     D+    Q+H   VK   L G+ + +++++++  YV CG+   A + + D     
Sbjct: 170 ACTVGSDLGFTPQVHAQAVK---LEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRS 226

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D VSW+  +   A   D  +   +F  L  +  +I++YT+  +L       + ++G+ + 
Sbjct: 227 D-VSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVH 285

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
               K G      + N LI MY KC    DA  +F  +   D V  + MI+ +  +    
Sbjct: 286 GLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAP 345

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A D+F  M +  + PN YT   +    S +  +     +H+HI+KSGF     +   ++
Sbjct: 346 EAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIV 405

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y K  A+ ++      +   +    N L S     +     L +++ +       N  
Sbjct: 406 GMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKY 465

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T+  +L+ C ++ DL  G  +H   LK+ +  D  V   ++DMY + G   +A+  F ++
Sbjct: 466 TYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRL 525

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
               +  W  +M  YA+     +    F  M +   +P++ T    L+ C          
Sbjct: 526 KERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVC---------- 575

Query: 600 TYLSCMSDLHGLIPQLEHY------------ACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           + L+C+    GL  QL  Y            + +VD+  + G L  A+M  D+     D 
Sbjct: 576 SDLACLGS--GL--QLHSYTIKSGWNSSVVSSALVDMYVKCGNLADAEMLFDE----SDT 627

Query: 648 HI---WQSLLSACTIYGNIDLGLLAGSKLL-ELQPDNESTYVLLSNLYASAGMWND 699
           H    W +++     +G+    L A  +++ E    +E T+V + +  + AG+ ++
Sbjct: 628 HDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDE 683


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 247/775 (31%), Positives = 412/775 (53%), Gaps = 34/775 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK--FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++ L+ K  +  +  +   LIS +          A R    T  RD+IT+NAL+S  A+
Sbjct: 188 QVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAK 247

Query: 59  FCQSGPALKLFDRL-----RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCL----KLGF 109
                    LF  +     R Q LRP   TF SL+ A      +  V    L    K G 
Sbjct: 248 KGDVASTFTLFKDMQRGDSRIQ-LRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGC 306

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           SS +Y+ S  +  +A+ G    A+  F      + V    ++ G V     +++ ++FV 
Sbjct: 307 SSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVG 366

Query: 170 MRSLGLELNEFSLTAVLGA--SFDVKE-----GEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            R+  +++N  +   +L A   + + E     G  +HG  ++ G L+ +   ++N ++N+
Sbjct: 367 TRNT-VDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTG-LTDLKIAVSNGLVNM 424

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-----ACDGVEAFGLFKDLRFNDFQINEY 277
           Y +CG    A K+F  +   D +SW+  I+A      C+  EA   +  +R +    + +
Sbjct: 425 YAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCE--EAVMHYSLMRQSCISPSNF 482

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            +I+ LSS  G ++L AG+Q+     K G     S+ N L+ MYG+CG ++D   +F+ +
Sbjct: 483 ALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM 542

Query: 338 IFKDSVSWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
              D VSWN+M+    S     ++ + +F +M+   LIPN  T  ++L A+S    L+  
Sbjct: 543 AEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELG 602

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVY 455
            QVH+ ++K G + D+ + + LI+ Y K   +   + + + + D+++A+  N++ S  +Y
Sbjct: 603 KQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIY 662

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                EA++    +  S + ++  TFSI+L ACA++  LE+G  +H   +++  + D+ V
Sbjct: 663 NGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVV 722

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
           ESA++DMY KCG ++ A + F  + + +   WN+M+ GYA+HG   +   +F +M +   
Sbjct: 723 ESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRE 782

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
            PD +T+++VL++C HAGLV     Y   M D HG++PQ+EHY+C++DLLGR G ++  K
Sbjct: 783 SPDHVTFVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIK 841

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIY---GNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
             I +MPI P+A IW+++L AC       NIDLG  A   LLE++P N   YVL SN +A
Sbjct: 842 EYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHA 901

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + GMW D  K R  M++    KE G SW+ +    H F AGD SH  +KEIY++L
Sbjct: 902 ATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKL 956



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 168/737 (22%), Positives = 331/737 (44%), Gaps = 70/737 (9%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           LIK G + D  L   L++ + K A    A +   +   R+ +++  L+SG      +  A
Sbjct: 87  LIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEA 146

Query: 66  LKLFDRLRYQ---GLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVS 117
            ++F  +  +   G RP +FTF +L++AC     + +     VHG+  K  ++S   + +
Sbjct: 147 FRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCN 206

Query: 118 GFIENYAKS--GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR---- 171
             I  Y     G  + A+  F      D + + A++  Y   G+   +  +F +M+    
Sbjct: 207 ALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDS 266

Query: 172 SLGLELNEFSLTAVLGASFDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            + L   E +  +++ A+          +Q+  + +K G  S +  ++ +A+++ + R G
Sbjct: 267 RIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDL--YVGSALVSAFARHG 324

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS 284
              +A  +F  + + + V+ +  I          EA  +F   R N   +N  T + LLS
Sbjct: 325 LTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR-NTVDVNADTYVVLLS 383

Query: 285 SVG----GERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++      E  LR G+ +     + G  ++ +++ N L++MY KCG +  A  IF  +  
Sbjct: 384 ALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEA 443

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            D +SWN++I+   +NG   +A+  +  M +  + P+ + + S L + +  K L    QV
Sbjct: 444 TDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQV 503

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H   +K G  LD S+ + L+  YG+C A+++  +V + + + + V  N +  V+  +   
Sbjct: 504 HCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTP 563

Query: 460 -AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
            +E ++++  +       N  TF  +L A + ++ LE GK +H   +K    +D  V++A
Sbjct: 564 ISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNA 623

Query: 519 VIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +I  Y K G +   +  F  +   RD+++ WN+M+ GY  +G   E  +    M   G  
Sbjct: 624 LISCYAKSGDMGSCEHLFTNMSDRRDAIS-WNSMISGYIYNGNLQEAMDCVWLMIHSGQI 682

Query: 577 PDEITYLAVLTSCCHAGLVREA--------RTYL-------SCMSDLHGLIPQLEH---- 617
            D  T+  +L +C     +           R++L       S + D++    ++++    
Sbjct: 683 MDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKL 742

Query: 618 -----------YACIVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNI 663
                      +  ++    R GL   A    ++M      PD   + S+LSAC+  G +
Sbjct: 743 FNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLV 802

Query: 664 DLGLLAGSKLLELQPDN 680
           + GL    +  E+ PD+
Sbjct: 803 ERGL----EYFEMMPDH 815



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 145/606 (23%), Positives = 280/606 (46%), Gaps = 38/606 (6%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++  G     E +H   +K G +  ++L +  + +YAK   + +A   F +  + + V+
Sbjct: 70  LLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVS 129

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMR---SLGLELNEFSLTAVLGASFDVKEGE-----QI 198
           +T +V GYV +G  +++  VF  M      G     F+   +L A  D          Q+
Sbjct: 130 WTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQV 189

Query: 199 HGFGVKVGFLSG--VCNHLNNAIMNLYVRC--GQKLDAVKMFDEITEPDVVSWSERI--- 251
           HG   K  + S   VC    NA++++Y  C  G  + A ++FD     D+++W+  +   
Sbjct: 190 HGLVSKTEYASNTTVC----NALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVY 245

Query: 252 AAACDGVEAFGLFKDLRFNDFQI----NEYTMINLLSSVGGERILRAG-KQIQAFCYKVG 306
           A   D    F LFKD++  D +I     E+T  +L+++        A   Q+  +  K G
Sbjct: 246 AKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSG 305

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               + +G+AL+S + + G  ++A+ IF  L  K++V+ N +I G     F  +A+ +F 
Sbjct: 306 CSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFV 365

Query: 367 HMLEFSLIPNGYTMASILEAVS----NSKSLKQAMQVHSHIIKSGFL-LDDSMISCLITT 421
                ++  N  T   +L A++    + + L+    VH H++++G   L  ++ + L+  
Sbjct: 366 GTRN-TVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNM 424

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC A+  + ++   ++  + +  N + S L       EA+  Y  +  SC  ++ S F
Sbjct: 425 YAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSC--ISPSNF 482

Query: 482 SIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +++  L +CA +  L  G+ +HC A+K   D D  V + ++ MY +CG + D  + F  +
Sbjct: 483 ALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM 542

Query: 540 CRDSLAGWNAMM--MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
                  WN MM  M  +Q     E+  +FN M + G+ P+++T++ +L +     ++  
Sbjct: 543 AEHDEVSWNTMMGVMASSQTP-ISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLEL 601

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            +   + +   HG++        ++    + G +   +     M    DA  W S++S  
Sbjct: 602 GKQVHAAVMK-HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGY 660

Query: 658 TIYGNI 663
              GN+
Sbjct: 661 IYNGNL 666



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 13/219 (5%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A +L  +           +H  +IK G   D  + + L+ +Y K   L  + +V  E+ +
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 441 KNAVHINALASVLVYASCHAEALELYRT----IWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           +NAV    L S  V      EA  ++R     +   CR  +  TF  +L+AC        
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTS-FTFGTLLRACQDGGPDRL 183

Query: 497 GKA--IHCLALKARYDQDIFVESAVIDMY--CKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
           G A  +H L  K  Y  +  V +A+I MY  C  G    A+R F       L  WNA+M 
Sbjct: 184 GFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMS 243

Query: 553 GYAQHGCYHEVSNLFNKM----SKFGVKPDEITYLAVLT 587
            YA+ G       LF  M    S+  ++P E T+ +++T
Sbjct: 244 VYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLIT 282


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/722 (32%), Positives = 384/722 (53%), Gaps = 18/722 (2%)

Query: 38  LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD +  RD  +Y +L+ G +R  ++  A +LF  +   G+  D   FSS++K   +L +
Sbjct: 49  LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108

Query: 97  N---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
                 +H  C+K GF   V + +  ++ Y K          F +  + + V +T ++ G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSG 210
           Y  N   D+   +F+ M++ G + N F+  A LG   +      G Q+H   VK G    
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
           +   ++N+++NLY++CG    A  +FD+     VV+W+  I+  A +G+  EA G+F  +
Sbjct: 229 I--PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           R N  +++E +  +++      + LR  +Q+     K GF+   +I  AL+  Y KC  +
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346

Query: 328 NDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
            DA  +F  +    + VSW +MI+G+ +N    +A+D+F  M    + PN +T + IL A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +     +    +VH+ ++K+ +    ++ + L+  Y K   + E+ +V S ID K+ V  
Sbjct: 407 LP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW 462

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLAL 505
           +A+ +          A++++  +     + N  TFS +L  CAA    + QGK  H  A+
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI 522

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+R D  + V SA++ MY K G IE A+  F++     L  WN+M+ GYAQHG   +  +
Sbjct: 523 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           +F +M K  VK D +T++ V  +C HAGLV E   Y   M     + P  EH +C+VDL 
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
            R G LE A   I+ MP P  + IW+++L+AC ++   +LG LA  K++ ++P++ + YV
Sbjct: 643 SRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYV 702

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           LLSN+YA +G W +  K+RK M E+ + KEPGYSWI V   T+ F AGD SH    +IY 
Sbjct: 703 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYM 762

Query: 746 EL 747
           +L
Sbjct: 763 KL 764



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 275/556 (49%), Gaps = 28/556 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   IK G   D  + T+L+  + K ++F+   +   + + R+++T+  LISG AR  
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
            +   L LF R++ +G +P++FTF++   A G L E  +      VH V +K G    + 
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y K G +  A + F        V + +M+ GY  NG   ++  +F  MR   
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + L+E S  +V+    ++KE    EQ+H   VK GFL     ++  A+M  Y +C   LD
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL--FDQNIRTALMVAYSKCTAMLD 348

Query: 232 AVKMFDEIT-EPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A+++F EI    +VVSW+  I+     DG  EA  LF +++    + NE+T   +L+++ 
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               + +  ++ A   K  +    ++G AL+  Y K G+V +A  +F  +  KD V+W++
Sbjct: 409 ----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKS 406
           M+AGY++ G    A+ MF  + +  + PN +T +SIL    + + S+ Q  Q H   IKS
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524

Query: 407 GFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
              LD S+   S L+T Y K   +  ++ V     +K+ V  N++ S         +AL+
Sbjct: 525 --RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMY 523
           +++ +     +++G TF  V  AC     +E+G K    +    +        S ++D+Y
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642

Query: 524 CKCGTIEDAKRAFRKI 539
            + G +E A +    +
Sbjct: 643 SRAGQLEKAMKVIENM 658



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 135/262 (51%), Gaps = 8/262 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ ++K  +     + T L+  + K      A +      ++DI+ ++A+++G A+  
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
           ++  A+K+F  L   G++P+ FTFSS++  C     S+ + +  HG  +K    S + + 
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  YAK G I SAE  F+   + D V++ +M+ GY  +G+  K+ +VF EM+   ++
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  +   V  A      V+EGE+     V+   ++    H N+ +++LY R GQ   A+
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH-NSCMVDLYSRAGQLEKAM 652

Query: 234 KMFDEITEPDVVSWSERIAAAC 255
           K+ + +  P   +    I AAC
Sbjct: 653 KVIENMPNPAGSTIWRTILAAC 674



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 130/268 (48%)

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           +A ++FD    +D  S+ S++ G+S +G   +A  +F ++    +  +    +S+L+  +
Sbjct: 45  NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
                    Q+H   IK GFL D S+ + L+ TY K +   + ++V  E+ ++N V    
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           L S     S + E L L+  +     + N  TF+  L   A      +G  +H + +K  
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
            D+ I V +++I++Y KCG +  A+  F K    S+  WN+M+ GYA +G   E   +F 
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVR 596
            M    V+  E ++ +V+  C +   +R
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELR 312


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/725 (32%), Positives = 387/725 (53%), Gaps = 18/725 (2%)

Query: 38  LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD + +RD  +Y +L+ G +R  ++  A +LF  +++ G+  D   FSS++K   +L +
Sbjct: 53  LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112

Query: 97  N---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
                 +H  C+K GF   V + +  ++ Y K          F +  + + V +T ++ G
Sbjct: 113 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISG 172

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSG 210
           Y  N   ++   +F+ M+  G + N F+  A LG   +      G Q+H   VK G    
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
           +   ++N+++NLY++CG    A  +FD+     VV+W+  I+  A +G+  EA G+F  +
Sbjct: 233 I--PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 290

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           R N  +++E +  +++      + LR  +Q+     K GF+   +I  AL+  Y KC  +
Sbjct: 291 RLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAM 350

Query: 328 NDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
            DA  +F    F  + VSW +MI+G+ +N    +A+ +F  M    + PN +T + IL A
Sbjct: 351 LDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +     +    +VH+ ++K+ +    ++ + L+  Y K   ++E+ +V S ID K+ V  
Sbjct: 411 LP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAW 466

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLAL 505
           +A+ +    A     A++++  +     + N  TFS +L  CAA T  + QGK  H  A+
Sbjct: 467 SAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAI 526

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+R D  + V SA++ MY K G IE A+  F++     L  WN+M+ GYAQHG   +  +
Sbjct: 527 KSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 586

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           +F +M K  VK D +T++ V  +C HAGLV E   Y   M     + P  EH +C+VDL 
Sbjct: 587 VFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 646

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
            R G LE A   ID MP    + IW+++L+AC ++   +LG LA  K++ + P++ + YV
Sbjct: 647 SRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYV 706

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           LLSN+YA +G W +  K+RK M E+ + KEPGYSWI V   T+ F AGD SH    +IY 
Sbjct: 707 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYM 766

Query: 746 ELIKL 750
           +L  L
Sbjct: 767 KLEDL 771



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 241/474 (50%), Gaps = 13/474 (2%)

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           A S  +  A   F    D D  +YT+++ G+  +G   ++  +F+ ++ LG+E++    +
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +VL  S  + +   G Q+H   +K GFL  V   +  ++++ Y++     D   +FDE+ 
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVS--VGTSLVDTYMKGSNFKDGRNVFDEMK 159

Query: 241 EPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           E +VV+W+  I+         E   LF  ++    Q N +T    L  +  E +   G Q
Sbjct: 160 ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ 219

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +     K G  + + + N+LI++Y KCG V  AR +FD    K  V+WNSMI+GY+ NG 
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +AL MF  M    +  +  + ASI++  +N K L+   Q+H  ++K GF+ D ++ + 
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339

Query: 418 LITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
           L+  Y KC A+ ++ R+  E     N V   A+ S  +      EA+ L+  +       
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N  T+S++L A   ++  E    +H   +K  Y++   V +A++D Y K G +++A + F
Sbjct: 400 NEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
             I    +  W+AM+ GYAQ G       +F++++K GVKP+E T+ ++L  C 
Sbjct: 456 SGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCA 509



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 156/577 (27%), Positives = 282/577 (48%), Gaps = 33/577 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   IK G   D  + T+L+  + K ++F+       + + R+++T+  LISG AR  
Sbjct: 118 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNS 177

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
            +   L LF R++ +G +P++FTF++   A G L E  +      VH V +K G    + 
Sbjct: 178 LNEEVLTLFMRMQDEGTQPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 234

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y K G +  A + F        V + +M+ GY  NG   ++  +F  MR   
Sbjct: 235 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNH 294

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + L+E S  +++    ++KE    EQ+H   VK GF+     ++  A+M  Y +C   LD
Sbjct: 295 VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFD--QNIRTALMVAYSKCMAMLD 352

Query: 232 AVKMFDEIT-EPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A+++F E     +VVSW+  I+     DG  EA GLF +++    + NE+T   +L+++ 
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               + +  ++ A   K  +    ++G AL+  Y K G+V++A  +F  +  KD V+W++
Sbjct: 413 ----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSA 468

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKS 406
           M+AGY++ G    A+ +F  + +  + PN +T +SIL    + + S+ Q  Q H   IKS
Sbjct: 469 MLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKS 528

Query: 407 GFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
              LD S+   S L+T Y K   +  ++ V     +K+ V  N++ S         +AL+
Sbjct: 529 --RLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 586

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMY 523
           +++ +     +++  TF  V  AC     +E+G K    +    +        S ++D+Y
Sbjct: 587 VFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 646

Query: 524 CKCGTIEDAKRAFRKICRDSLAG---WNAMMMGYAQH 557
            + G +E A +    +   +LAG   W  ++     H
Sbjct: 647 SRAGQLEKAMKVIDNM--PNLAGSTIWRTILAACRVH 681


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/762 (29%), Positives = 403/762 (52%), Gaps = 11/762 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I++ L+K+G  L  +    L+S ++K      A R   +  +   +++++L++  +   
Sbjct: 25  HIHAHLLKSG--LFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNA 82

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               AL  F  +R   +R + F    ++K          +H + +  G    +++ +  +
Sbjct: 83  MPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVANALV 142

Query: 121 ENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
             Y   G +  A M F +   + + V++  ++  YV N     + +VF EM   G++ NE
Sbjct: 143 AMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNE 202

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F  + V+ A   S D++ G ++H   ++ G+   V     NA++++Y + G    A  +F
Sbjct: 203 FGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT--ANALVDMYSKLGDIRMAAVVF 260

Query: 237 DEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            ++ E DVVSW+  I+          A  L   ++ +    N +T+ ++L +  G     
Sbjct: 261 GKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFN 320

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+QI  F  K        I   L+ MY K G ++DA+ +FD++  +D V WN++I+G S
Sbjct: 321 LGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCS 380

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
                 +AL +FC M +     N  T+A++L++ ++ +++    QVH+   K GFL D  
Sbjct: 381 HGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSH 440

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           +++ LI +Y KC+ LN + RV  +    + +   ++ + L       +A++L+  +    
Sbjct: 441 VVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 500

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            + +    S +L ACA+++  EQGK +H   +K ++  D+F  +A++  Y KCG+IEDA 
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDAD 560

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            AF  +    +  W+AM+ G AQHG      ++F++M    + P+ IT  +VL +C HAG
Sbjct: 561 LAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV EA+ Y + M ++ G+    EHYAC++DLLGR G L+ A   ++ MP   +A +W +L
Sbjct: 621 LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L+A  ++ + +LG LA  KL  L+P+   T+VLL+N YASAGMW+DV K+RK MK+  + 
Sbjct: 681 LAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVK 740

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           KEP  SW+ +    H F  GD SH ++++IY +L +L + M 
Sbjct: 741 KEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMT 782



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 15/321 (4%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+  +L   + ++SL Q   +H+H++KSG        + L++ Y KC     ++RV  EI
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                V  ++L +     +   +AL  +R++       N     +VLK CA   D   G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA--PDAGFGT 120

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQH 557
            +H LA+      DIFV +A++ MY   G +++A+  F +  C  +   WN +M  Y ++
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180

Query: 558 G-CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
             C H V  +F +M   GV+P+E  +  V+ +C  +  +   R  +  M    G    + 
Sbjct: 181 DRCSHAV-KVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRK-VHAMVIRTGYDKDVF 238

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLL 674
               +VD+  ++G +  A +   ++P   D   W + +S C ++G+    L LL   K  
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHGHDQHALELLLQMKSS 297

Query: 675 ELQPDNESTYVLLSNLYASAG 695
            L P+    + L S L A AG
Sbjct: 298 GLVPN---VFTLSSILKACAG 315


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 245/763 (32%), Positives = 395/763 (51%), Gaps = 19/763 (2%)

Query: 1   QIYSLLIKNG-HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDI----ITYNALISG 55
           Q++   +  G H  D  L T L+  +     FR A   +F +  R      + +N LI G
Sbjct: 60  QVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA-VFSSLPRGAAACALPWNWLIRG 118

Query: 56  LARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS 110
           L        AL  + ++        PD+ TF  +VK+C   G++    +VH     LG  
Sbjct: 119 LTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLD 178

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             +++ S  I+ YA  G +  A   F    + D V +  M+ GYV  G    + E+F +M
Sbjct: 179 GDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDM 238

Query: 171 RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           R+ G E N  +L   L  S    D+  G Q+H   VK G  S V   + N ++++Y +C 
Sbjct: 239 RASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA--VANTLVSMYAKCK 296

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS 284
              D  K+F  +   D+V+W+  I+         +A  LF D++ +  + +  T+++LL 
Sbjct: 297 CLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLP 356

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           ++        GK++  +  +      V + +AL+ +Y KC  V  A+S++D     D V 
Sbjct: 357 ALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVI 416

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            ++MI+GY  NG   +A+ MF ++LE  + PN   +AS+L A ++  ++K   ++HS+ +
Sbjct: 417 GSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYAL 476

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K+ +     + S L+  Y KC  L+ S  + S+I  K+ V  N++ S         EAL 
Sbjct: 477 KNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALN 536

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +     + +  T S VL ACA++  +  GK IH + +K     D+F ESA+IDMY 
Sbjct: 537 LFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG +E A R F  +   +   WN+++  Y  +G   E  +L   M + G K D +T+LA
Sbjct: 597 KCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLA 656

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           ++++C HAG V+E      CM++ + + P++EH+AC+VDL  R G L+ A   I  MP  
Sbjct: 657 LVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFK 716

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           PDA IW +LL AC ++ N++L  +A  +L +L P N   YVL+SN+ A AG W+ V K+R
Sbjct: 717 PDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVR 776

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + MK+  + K PGYSW+ V   +H F A D SH  S++IY  L
Sbjct: 777 RLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSL 819


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/724 (32%), Positives = 380/724 (52%), Gaps = 50/724 (6%)

Query: 78  RPDAFTFSSLV---KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           +PD  TF +++    +CG + E   +H       F     + +  I  Y K   +V A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 135 CFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
            F   D    + V++ AM+  Y  NG   ++  ++  M   GL  +  +  +VLGA   +
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 193 KEGEQIHGFGVKVGFLSGV--CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            +G +IH    +V F SG+     L NA++ +Y R G   DA +MF  +   D  SW+  
Sbjct: 124 AQGREIHN---RV-FYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I A   + D   A  +FK+++  D + N  T IN++S      +L  G++I A     GF
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              + +  ALI+MYGKCG  ++AR +FD +  +D VSWN MI  Y  NG F++AL+++  
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           +          T  SIL A S+ K+L Q   VHSHI++ G   + ++ + L+  Y KC +
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 428 LNESKRVLSEIDKKNAV----------------------------------HINALASVL 453
           L E+++V + +  ++AV                                    NA+ +  
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTY 418

Query: 454 VYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           V   C   A++++R + G+   + +  TF  VL+ACA++  L + KA+H    ++  + +
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESN 478

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V + +I+MY +CG++E+A+R F      ++  W AM+  ++Q+G Y E  +LF +M  
Sbjct: 479 VVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDL 538

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GVKPD++TY ++L  C H G + +   Y + M++LH L P  +H+A +VDLLGR G L 
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLF 598

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            AK  ++ MP  PD   W + L+AC I+G ++LG  A  ++ EL P + + Y+ +SN+YA
Sbjct: 599 DAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYA 658

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + GMW  V  +RK+M+E+ L K PG S+I V G  H F +G   H ++ EI +EL +L+ 
Sbjct: 659 AHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHG 718

Query: 753 HMVA 756
            M A
Sbjct: 719 LMRA 722



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/648 (25%), Positives = 293/648 (45%), Gaps = 94/648 (14%)

Query: 14  DPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           D ++   LIS + K     D R  F  + D + R+++++NA+I+  A+   S  AL L+ 
Sbjct: 41  DTMVGNALISMYGKCDSLVDARSVFESM-DWRQRNVVSWNAMIAAYAQNGHSTEALVLYW 99

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           R+  QGL  D  TF S++ AC SL +   +H      G  S   L +  +  YA+ G + 
Sbjct: 100 RMNLQGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVG 159

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A+  F+     D  ++ A++  +  +G++  +  +F EM+      +   +  + G S 
Sbjct: 160 DAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFST 219

Query: 191 D--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
              + EG +IH   V  GF + +   +  A++N+Y +CG   +A ++FD++ + D+VSW+
Sbjct: 220 PEVLPEGRKIHAEIVANGFDTDLV--VATALINMYGKCGSSHEAREVFDKMKKRDMVSWN 277

Query: 249 ERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I       D  EA  L++ L    F+  + T +++L +    + L  G+ + +   + 
Sbjct: 278 VMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER 337

Query: 306 GFMEVVSIGNALISMYGKCGQVND----------------------------------AR 331
           G    V++  AL++MY KCG + +                                  AR
Sbjct: 338 GLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKAR 397

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNS 390
            +FD L  +D++SWN+MI  Y +NG    A+ +F  M   + L P+  T  ++LEA ++ 
Sbjct: 398 KVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASL 457

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             L +   +H+ I +S    +  + + LI  Y +C +L E++R+ +   +K  V   A+ 
Sbjct: 458 GRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV 517

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-------KAIHCL 503
           +       +AEAL+L++ +     + +  T++ +L  C     LEQG         +H L
Sbjct: 518 AAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHAL 577

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKR---------------AFRKICR------- 541
           A  A    D F  +A++D+  + G + DAK                 F   CR       
Sbjct: 578 APTA----DHF--AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLEL 631

Query: 542 -------------DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
                         S A + AM   YA HG + +V+++  KM + G+K
Sbjct: 632 GEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLK 679



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 172/398 (43%), Gaps = 54/398 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ ++ NG   D +++T LI+ + K      A       + RD++++N +I       
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNG 287

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL+L+ +L  +G +    TF S++ AC S   L +  +VH   L+ G  S V + +
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347

Query: 118 GFIENYAKSGEIVSAEMCF-----RDCL-----------------------------DLD 143
             +  YAK G +  A   F     RD +                               D
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDVKEGEQIHGFG 202
            +++ AM+  YV NG    + ++F EM  + GL+ +  +  AVL A   +    ++    
Sbjct: 408 TISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467

Query: 203 VKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GV 258
            ++       N  + N ++N+Y RCG   +A ++F    E  VVSW+  +AA        
Sbjct: 468 AQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN--- 315
           EA  LF+++     + ++ T  ++L           G   Q + Y     E+ ++     
Sbjct: 528 EALDLFQEMDLEGVKPDDVTYTSILFVC-----THGGSLEQGWRYFTDMAELHALAPTAD 582

Query: 316 ---ALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
              A++ + G+ G++ DA+ + + + F+ D V+W + +
Sbjct: 583 HFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFL 620



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 13/217 (5%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           R+ +  TF  VL +C++  D+ +G+A+H     +R+++D  V +A+I MY KC ++ DA+
Sbjct: 3   RQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62

Query: 534 RAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
             F  +   + ++  WNAM+  YAQ+G   E   L+ +M+  G+  D +T+++VL +C  
Sbjct: 63  SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122

Query: 592 AGLVREA--RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
               RE   R + S +     L   L      V +  R G +  AK     +    D   
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANAL------VTMYARFGSVGDAKRMFQSLQT-RDETS 175

Query: 650 WQSLLSACTIYGNIDLGLLAGSKL-LELQPDNESTYV 685
           W +++ A +  G+    L    ++  +++P N +TY+
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKCDVKP-NSTTYI 211


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/718 (32%), Positives = 388/718 (54%), Gaps = 27/718 (3%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCL 105
           +N L+   +R  Q+  AL LF  L +  L+PD  T S +   C    + ++   VH  C+
Sbjct: 61  HNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCV 120

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K G    V + +  ++ Y K+  +      F +  + + V++T+++ GY WNG +    E
Sbjct: 121 KFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWE 180

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +F +M+  G+  N ++++ V+ A  +   V  G Q+H   VK GF   +   + N++++L
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIP--VFNSLISL 238

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTM 279
           Y R G   DA  +FD++   D V+W+  IA        +E F +F  ++    +    T 
Sbjct: 239 YSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTF 298

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            +++ S    R L   K +Q    K GF     +  AL+    KC +++DA S+F  +  
Sbjct: 299 ASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEE 358

Query: 340 -KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-----VSNSKSL 393
            K+ VSW +MI+G  +NG  +QA+++F  M    + PN +T ++IL       VS     
Sbjct: 359 GKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVS----- 413

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               ++H+ +IK+ +    S+ + L+  Y K     ++ +V   I+ K+ +  +A+ +  
Sbjct: 414 ----EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGY 469

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL-EQGKAIHCLALKARYDQD 512
                  EA +L+  +     + N  TFS V+ ACA+ T   EQGK  H  A+K R +  
Sbjct: 470 AQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNA 529

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V SA++ MY K G I+ A   F++     L  WN+M+ GY+QHG   +   +F++M K
Sbjct: 530 LCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             +  D +T++ V+T+C HAGLV + + Y + M + H + P ++HY+C++DL  R G+LE
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLE 649

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I++MP PP A +W++LL A  ++ N++LG LA  KL+ LQP++ + YVLLSN+YA
Sbjct: 650 KAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYA 709

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +AG W +   +RK M ++ + KEPGYSWI V   T+ F AGD +H  S +IY +L +L
Sbjct: 710 AAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSEL 767



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 244/449 (54%), Gaps = 16/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++++++K+G      +  +LIS +++    R A R +FD    RD +T+N++I+G  R 
Sbjct: 215 QVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA-RDVFDKMEIRDWVTWNSMIAGYVRN 273

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV---CLKLGFSSRVYLV 116
            Q     ++F++++  G++P   TF+S++K+C SL+E  +V  +    LK GF++   ++
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVI 333

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  +   +K  E+  A   F    +  N V++TAM+ G + NG  D++  +F +MR  G+
Sbjct: 334 TALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGV 393

Query: 176 ELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + N F+ +A+L   + V   E +H   +K  +     + +  A+++ YV+ G  +DAVK+
Sbjct: 394 KPNHFTYSAILTVHYPVFVSE-MHAEVIKTNYERS--SSVGTALLDAYVKLGNTIDAVKV 450

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER-I 291
           F+ I   D+++WS  +A      +  EA  LF  L     + NE+T  +++++       
Sbjct: 451 FEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAA 510

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              GKQ  A+  K+     + + +AL++MY K G ++ A  +F     +D VSWNSMI+G
Sbjct: 511 AEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISG 570

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS++G   +AL++F  M + ++  +  T   ++ A +++  +++  +  + +I     ++
Sbjct: 571 YSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHH-IN 629

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
            +M   SC+I  Y +   L ++  +++E+
Sbjct: 630 PTMKHYSCMIDLYSRAGMLEKAMGIINEM 658



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 252/528 (47%), Gaps = 18/528 (3%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           + T+L+  + K  +     R   +   R+++++ +L++G +     G   +LF +++Y+G
Sbjct: 130 VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG 189

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           + P+ +T S+++ A    G +     VH + +K GF   + + +  I  Y++ G +  A 
Sbjct: 190 VLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDAR 249

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F      D V + +M+ GYV NG+  +  E+F +M+  G++    +  +V+ +   ++
Sbjct: 250 DVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLR 309

Query: 194 EGEQIHGF---GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSE 249
           E   +       +K GF +     +  A+M    +C +  DA+ +F  + E  +VVSW+ 
Sbjct: 310 ELALVKLMQCKALKSGFTTDQI--VITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTA 367

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I+         +A  LF  +R    + N +T   +L+      +     ++ A   K  
Sbjct: 368 MISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTN 423

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           +    S+G AL+  Y K G   DA  +F+ +  KD ++W++M+AGY++ G   +A  +F 
Sbjct: 424 YERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFH 483

Query: 367 HMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
            +++  + PN +T +S++ A  S + + +Q  Q H++ IK        + S L+T Y K 
Sbjct: 484 QLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKR 543

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             ++ +  V     +++ V  N++ S         +ALE++  +     +V+  TF  V+
Sbjct: 544 GNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVI 603

Query: 486 KACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
            AC     +E+G K  + +      +  +   S +ID+Y + G +E A
Sbjct: 604 TACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKA 651


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 247/755 (32%), Positives = 400/755 (52%), Gaps = 16/755 (2%)

Query: 1   QIYSLLIKNG-HHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLAR 58
           +I+S ++  G H  D  L  TL+  ++K      A + LFDT  +++++T+++++S    
Sbjct: 59  KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANK-LFDTMSHKNLVTWSSMVSMYTH 117

Query: 59  FCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
                 AL LF + +R    +P+ +  +S+V+AC   G L     +HG+ +K G+   VY
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ Y K   I  A + F       +  +T ++ GY   G    S ++F +M+   
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237

Query: 175 LELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  +++ L++VL A   +K    G+QIH + ++ G +  V   + N  ++ Y +C +   
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVS--MVNGFIDFYFKCHKVQL 295

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+FD + + +VVSW+  IA         +A  LF ++    +  + +   ++L+S G 
Sbjct: 296 GRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGS 355

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+Q+ A+  KV       + N LI MY KC  + DAR +F+ +   D VS+N+M
Sbjct: 356 LVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAM 415

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GYS      +ALD+F  M      P      S+L   ++   L+ + Q+H  IIK G 
Sbjct: 416 IEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGV 475

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            LD+   S LI  Y KC+ + +++ V  EI  K+ V   A+ S     S + E+L+LY+ 
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKC 535

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  S  + N  TF+ V+ A + +  L  G+  H   +K  +D D FV + ++DMY K G+
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGS 595

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           IE+A +AF        A WN+M+  YAQHG   +   +F  M   G+KP+ +T++ VL++
Sbjct: 596 IEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSA 655

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GL+     +   MS   G+ P +EHY C+V LLGR G L  AK  I++MPI   A 
Sbjct: 656 CSHTGLLDLGFDHFDSMSQF-GIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAV 714

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W+SLLSAC + GN++LG  A    +   P +  +YVLLSN++AS GMW +V +LR++M 
Sbjct: 715 VWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMD 774

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
              + KEPG SWI V    H F A D++H  S  I
Sbjct: 775 ISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPI 809


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/759 (31%), Positives = 409/759 (53%), Gaps = 31/759 (4%)

Query: 12  HLDPILSTTLIS----HFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           H +P+L + +++       + +D R A +    T  RD+  +N L+   +R  Q+  AL 
Sbjct: 29  HANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALH 88

Query: 68  LFDRLRYQGLRPDAFTFSSLVKAC-GSLQEN--EIVHGVCLKLGFSSRVYLVSGFIENYA 124
           LF  L   GL PD++T S ++  C GS      E VH  C+K G    + + +  ++ Y 
Sbjct: 89  LFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYT 148

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K+G +      F +  D D V++ +++ GY WN   D+  E+F  M+  G   + ++++ 
Sbjct: 149 KTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVST 208

Query: 185 VLGASFD---VKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
           V+ A  +   V  G QIH   VK+GF +   VCN    +++++  + G   DA  +FD +
Sbjct: 209 VIAALANQGAVAIGMQIHALVVKLGFETERLVCN----SLISMLSKSGMLRDARVVFDNM 264

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              D VSW+  IA        +EAF  F +++    +    T  +++ S    + L   +
Sbjct: 265 ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVR 324

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSEN 355
            +     K G     ++  AL+    KC +++DA S+F  +   +  VSW +MI+GY +N
Sbjct: 325 VLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQN 384

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM---QVHSHIIKSGFLLDD 412
           G  +QA+++F  M    + PN +T ++IL       +++ A+   ++H+ +IK+ +    
Sbjct: 385 GDTDQAVNLFSLMRREGVKPNHFTYSTIL-------TVQHAVFISEIHAEVIKTNYEKSS 437

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + L+  + K   ++++ +V   I+ K+ +  +A+ +    A    EA +++  +   
Sbjct: 438 SVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTRE 497

Query: 473 CREVNGSTFSIVLKACAAMT-DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
             + N  TF  ++ AC A T  +EQGK  H  A+K R +  + V S+++ +Y K G IE 
Sbjct: 498 GIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIES 557

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A   F++     L  WN+M+ GYAQHG   +   +F +M K  ++ D IT++ V+++C H
Sbjct: 558 AHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAH 617

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV + + Y + M + H + P +EHY+C++DL  R G+L  A   I+ MP PP A +W+
Sbjct: 618 AGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWR 677

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +L+A  ++ NI+LG LA  K++ L+P + + YVLLSN+YA+AG W++   +RK M ++ 
Sbjct: 678 IVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRR 737

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + KEPGYSWI V   T+ F AGD SH  S  IY +L +L
Sbjct: 738 VKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSEL 776



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 239/447 (53%), Gaps = 16/447 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           QI++L++K G   + ++  +LIS  +K    R A R +FD  +N+D +++N++I+G    
Sbjct: 224 QIHALVVKLGFETERLVCNSLISMLSKSGMLRDA-RVVFDNMENKDSVSWNSMIAGHVIN 282

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            Q   A + F+ ++  G +P   TF+S++K+C SL+E     ++H   LK G S+   ++
Sbjct: 283 GQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVL 342

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  +    K  EI  A   F     + + V++TAM+ GY+ NG+ D++  +F  MR  G+
Sbjct: 343 TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGV 402

Query: 176 ELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + N F+ + +L     V   E IH   +K  +     + +  A+++ +V+ G   DAVK+
Sbjct: 403 KPNHFTYSTILTVQHAVFISE-IHAEVIKTNYEKS--SSVGTALLDAFVKIGNISDAVKV 459

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI- 291
           F+ I   DV++WS  +A    A +  EA  +F  L     + NE+T  +++++       
Sbjct: 460 FELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ  A+  K+     + + ++L+++Y K G +  A  IF     +D VSWNSMI+G
Sbjct: 520 VEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISG 579

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+++G   +AL++F  M + +L  +  T   ++ A +++  + +  Q + +I+ +   ++
Sbjct: 580 YAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKG-QNYFNIMINDHHIN 638

Query: 412 DSM--ISCLITTYGKCNALNESKRVLS 436
            +M   SC+I  Y +   L ++  +++
Sbjct: 639 PTMEHYSCMIDLYSRAGMLGKAMDIIN 665


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/766 (30%), Positives = 407/766 (53%), Gaps = 17/766 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLI---SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           +I++L+I  G       S  LI   SHF + A     FR +   +N  +  +N++I   +
Sbjct: 25  RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN--VYLWNSIIRAFS 82

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVY 114
           +      AL+ + +LR   + PD +TF S++KAC  L + E   +V+   L +GF S ++
Sbjct: 83  KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y++ G +  A   F +    D V++ +++ GY  +G ++++ E++ E+++  
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  + F++++VL   G    VK+G+ +HGF +K          +NN ++ +Y++  +  D
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS--GVNSVVVVNNGLVAMYLKFRRPTD 260

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FDE+   D VS++  I          E+  +F +   + F+ +  T+ ++L + G 
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 319

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L   K I  +  K GF+   ++ N LI +Y KCG +  AR +F+ +  KD+VSWNS+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GY ++G   +A+ +F  M+      +  T   ++   +    LK    +HS+ IKSG 
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            +D S+ + LI  Y KC  + +S ++ S +   + V  N + S  V     A  L++   
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  S    + +TF + L  CA++     GK IHC  L+  Y+ ++ + +A+I+MY KCG 
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E++ R F ++ R  +  W  M+  Y  +G   +    F  M K G+ PD + ++A++ +
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GLV E       M   + + P +EHYAC+VDLL R   +  A+  I  MPI PDA 
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW S+L AC   G+++       +++EL PD+    +L SN YA+   W+ V  +RK +K
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +K + K PGYSWI VG   H F +GD S  QS+ IYK L  LY  M
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 17/186 (9%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR-D 542
           + +A ++ ++L + + IH L +    D   F    +ID Y        +   FR++    
Sbjct: 10  ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           ++  WN+++  ++++G + E    + K+ +  V PD+ T+ +V+ +C  AGL      + 
Sbjct: 70  NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGL------FD 121

Query: 603 SCMSDL-------HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           + M DL        G    L     +VD+  R+GLL  A+   D+MP+  D   W SL+S
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLIS 180

Query: 656 ACTIYG 661
             + +G
Sbjct: 181 GYSSHG 186


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 245/763 (32%), Positives = 395/763 (51%), Gaps = 19/763 (2%)

Query: 1   QIYSLLIKNG-HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDI----ITYNALISG 55
           Q++   +  G H  D  L T L+  +     FR A   +F +  R      + +N LI G
Sbjct: 60  QVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA-VFSSLPRGAAACALPWNWLIRG 118

Query: 56  LARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS 110
           L        AL  + ++        PD+ TF  +VK+C   G++    +VH     LG  
Sbjct: 119 LTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLD 178

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             +++ S  I+ YA  G +  A   F    + D V +  M+ GYV  G    + E+F +M
Sbjct: 179 GDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDM 238

Query: 171 RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           R+ G E N  +L   L  S    D+  G Q+H   VK G  S V   + N ++++Y +C 
Sbjct: 239 RASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA--VANTLVSMYAKCK 296

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS 284
              D  K+F  +   D+V+W+  I+         +A  LF D++ +  + +  T+++LL 
Sbjct: 297 CLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLP 356

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           ++        GK++  +  +      V + +AL+ +Y KC  V  A+S++D     D V 
Sbjct: 357 ALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVI 416

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            ++MI+GY  NG   +A+ MF ++LE  + PN   +AS+L A ++  ++K   ++HS+ +
Sbjct: 417 GSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYAL 476

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K+ +     + S L+  Y KC  L+ S  + S+I  K+ V  N++ S         EAL 
Sbjct: 477 KNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALN 536

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +     + +  T S VL ACA++  +  GK IH + +K     D+F ESA+IDMY 
Sbjct: 537 LFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG +E A R F  +   +   WN+++  Y  +G   E  +L   M + G K D +T+LA
Sbjct: 597 KCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLA 656

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           ++++C HAG V+E      CM++ + + P++EH+AC+VDL  R G L+ A   I  MP  
Sbjct: 657 LVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFK 716

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           PDA IW +LL AC ++ N++L  +A  +L +L P N   YVL+SN+ A AG W+ V K+R
Sbjct: 717 PDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVR 776

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + MK+  + K PGYSW+ V   +H F A D SH  S++IY  L
Sbjct: 777 RLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSL 819


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/747 (30%), Positives = 396/747 (53%), Gaps = 20/747 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ L+++  H D  L  +L++ + K      A R      +RDI+ + A+IS      
Sbjct: 71  ELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAG 130

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            S  AL +F R+  +G+ P+ FT +S++KAC     ++    VHG  +KL      Y+ S
Sbjct: 131 DSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGS 190

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +E Y   GE+ +AE       +  +V++ A++ GY  +G++ +   +  ++ + G E+
Sbjct: 191 SLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEI 250

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++++L  VL    ++   K G+ +H   +K G  +   N LN+ ++ +Y RC    +A +
Sbjct: 251 SKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETD--NVLNSCLVEMYSRCLSAEEAYE 308

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL---SSVGG 288
           +F  I EPDVV  S  I+         EA  LF  +     + N Y  + +    S  G 
Sbjct: 309 VFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGD 368

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             + R+   + A+  K GF  +  +G+A+++MY K G V DA   FD +   D+ SWN++
Sbjct: 369 ANLCRS---VHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTI 425

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++ +       Q L +F  M       N YT  S+L   ++  +L+   QVH+ I+KSG 
Sbjct: 426 LSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGL 485

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D  +   L+  Y +      +  V  ++ +++A     + S         + +E +R+
Sbjct: 486 QNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRS 545

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       + +T ++ L  C+ M  L  G  +H  A+K+ ++  + V  A++DMY KCG 
Sbjct: 546 MLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGN 604

Query: 529 IEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           I DA+  F +   RD +A WN ++ GY+QHG  ++  + F +M   G +PD IT++ VL+
Sbjct: 605 IADAEMLFHESETRDQVA-WNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLS 663

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAGL+ E R Y   +S ++G+ P +EHYAC+VD+L + G L  A+  I+QMP+ PD+
Sbjct: 664 ACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDS 723

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW+++L AC I+ NI++   A  +L EL+P + S+ +LLSN+YA  G W+DV ++R  +
Sbjct: 724 SIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNIL 783

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            +  + KEPG SWI + G  H F + D
Sbjct: 784 LDHGVKKEPGCSWIEINGQIHMFLSQD 810



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 219/504 (43%), Gaps = 9/504 (1%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L+  + +H   L+       +L+   +  Y K G +V A   F      D VA+TAM+ 
Sbjct: 65  TLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMIS 124

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLS 209
            +   G+ D++ ++F  M   G+  N F+L +VL A       K   Q+HG  VK+  L 
Sbjct: 125 AHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD 184

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKD 266
               ++ ++++  Y  CG+   A  +   + E   VSW+  +   A   D      + + 
Sbjct: 185 D--PYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEK 242

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           L  +  +I++YT+  +L       + + G+ + A   K G      + + L+ MY +C  
Sbjct: 243 LVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLS 302

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
             +A  +F  +   D V  ++MI+ +  +    +ALD+F  M    + PN Y    I   
Sbjct: 303 AEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGV 362

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            S +        VH++I+KSGF +   +   ++  Y K  A+ ++      I + +    
Sbjct: 363 ASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSW 422

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N + S     S   + L +++ +       N  T+  VL+ C ++ +L  G  +H   LK
Sbjct: 423 NTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILK 482

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
           +    D  V   ++DMY + G    A   F ++       W  +M GYA+     +V   
Sbjct: 483 SGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEY 542

Query: 567 FNKMSKFGVKPDEITYLAVLTSCC 590
           F  M +  ++P + T LAV  S C
Sbjct: 543 FRSMLRENIRPSDAT-LAVSLSVC 565



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 6/249 (2%)

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           ++   S     N  L    H  E  L       A+ L+  +  ++L++  ++H+ +++S 
Sbjct: 27  LLGARSSPSHANARLHTVAHAEELRL------HAAALQDCAVRRTLRRGQELHARLLRSA 80

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              D  ++  L+  Y KC  L +++RV   +  ++ V   A+ S    A    +AL+++ 
Sbjct: 81  LHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFA 140

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       NG T + VLKAC+  +  +    +H   +K     D +V S++++ Y  CG
Sbjct: 141 RMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCG 200

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++ A+     +   S   WNA++ GYA+HG Y  V  +  K+   G +  + T   VL 
Sbjct: 201 ELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLK 260

Query: 588 SCCHAGLVR 596
            C   GL +
Sbjct: 261 CCMELGLAK 269



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 30/247 (12%)

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           A+  ++   HAE L L+               +  L+ CA    L +G+ +H   L++  
Sbjct: 37  ANARLHTVAHAEELRLH---------------AAALQDCAVRRTLRRGQELHARLLRSAL 81

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             D F+  ++++MYCKCG + DA+R F  +    +  W AM+  +   G   +  ++F +
Sbjct: 82  HPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFAR 141

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ACIVD 623
           M++ G+ P+  T  +VL +C          ++      +HG + +L         + +V+
Sbjct: 142 MNQEGIAPNGFTLASVLKAC-------SGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVE 194

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
                G L+ A+  +  +P   D   W +LL+    +G+    ++   KL+    D  S 
Sbjct: 195 AYTSCGELDAAETVLLGLPERSDVS-WNALLNGYARHGDYRRVMIIIEKLVA-SGDEISK 252

Query: 684 YVLLSNL 690
           Y L + L
Sbjct: 253 YTLPTVL 259


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 244/750 (32%), Positives = 395/750 (52%), Gaps = 17/750 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+  L+  ++K    R A R      +++++++ + IS  A+      A+ LF   +
Sbjct: 45  DLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQ 104

Query: 74  YQ--GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
               G  P+ F  +S ++AC    ++   + VHGV +++G    VY+ +  I  YAK G 
Sbjct: 105 RASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC 164

Query: 129 IVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           I +A + F D L + N V +TA++ GY   G+   + E+F +M   G+  + F L + + 
Sbjct: 165 IDAAMLVF-DALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVS 223

Query: 188 ASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A   +   + G Q HG+  ++   +     + NA+++LY +C +   A K+FD +   ++
Sbjct: 224 ACSALGFLEGGRQTHGYAYRIAVETDAS--VINALIDLYCKCSRLSLARKLFDCMENRNL 281

Query: 245 VSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VSW+  IA     +CD  EA  +F  L    +Q + +   ++L+S G    +  G+Q+ A
Sbjct: 282 VSWTTMIAGYMQNSCDA-EAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHA 340

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              K        + N+LI MY KC  + +AR++F+ L   D++S+N+MI GYS  G    
Sbjct: 341 HAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAG 400

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           A+D+F  M   SL P+  T  S+L   S+  +++ + Q+H  I+KSG  LD    S LI 
Sbjct: 401 AIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLID 460

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y K + + ++K V + +  ++ V  NA+   L       EA++L+  +  S    N  T
Sbjct: 461 VYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFT 520

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F  ++   + +  +  G+  H   +KA  D D  V +A+IDMY KCG I++ +  F    
Sbjct: 521 FVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTL 580

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
              +  WN+M+  YAQHG   E   +F  M   GV+P+ +T++ VL++C HAGLV E   
Sbjct: 581 GKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLR 640

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           +   M   + + P  EHYA +V+L GR G L  AK  I++MPI P A +W+SLLSAC ++
Sbjct: 641 HFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLF 700

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           GN+++G  A    L   P +    VL+SN+YAS G+W+D  KLR+ M    + KEPGYSW
Sbjct: 701 GNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSW 760

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           I V    H F A    H ++  IY  L +L
Sbjct: 761 IEVMKEVHTFIARGREHPEADVIYSLLDEL 790



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 2/320 (0%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LLS + G+R+ R      A     G +  + + N L+  Y K G+V DAR +FD +  K+
Sbjct: 17  LLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKN 76

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQV 399
            VSW S I+ ++++G    A+ +F      S    PN + +AS L A + S+++    QV
Sbjct: 77  LVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQV 136

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H   ++ G   +  + + LI  Y K   ++ +  V   +  KN V   A+ +        
Sbjct: 137 HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQG 196

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
             ALEL+  +       +    +  + AC+A+  LE G+  H  A +   + D  V +A+
Sbjct: 197 GVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINAL 256

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           ID+YCKC  +  A++ F  +   +L  W  M+ GY Q+ C  E   +F ++S+ G +PD 
Sbjct: 257 IDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDV 316

Query: 580 ITYLAVLTSCCHAGLVREAR 599
               ++L SC     + + R
Sbjct: 317 FACASILNSCGSLAAIWQGR 336



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 128/261 (49%), Gaps = 10/261 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L++K+G  LD    ++LI  ++KF+    A        NRD++ +NA+I GLA+  
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNE 497

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
           Q   A+KLF++L+  GL P+ FTF +LV    +L      +  H   +K G  S  ++ +
Sbjct: 498 QGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSN 557

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I    + F   L  D + + +M+  Y  +G+ +++  VF  M   G+E 
Sbjct: 558 ALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEP 617

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL A      V EG +   F +K  +          +++NL+ R G KL A K
Sbjct: 618 NYVTFVGVLSACAHAGLVDEGLRHFDF-MKTKYAIEPGTEHYASVVNLFGRSG-KLHAAK 675

Query: 235 MFDE--ITEPDVVSWSERIAA 253
            F E    EP    W   ++A
Sbjct: 676 EFIERMPIEPAAAVWRSLLSA 696


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/766 (30%), Positives = 410/766 (53%), Gaps = 17/766 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLI---SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           +I++L+I  G       S  LI   SHF   A     FR +   +N  +  +N++I   +
Sbjct: 25  RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKN--VYIWNSIIRAFS 82

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVY 114
           +      AL+ + +LR   + PD +TF S++KAC  L + E   +V+   L++GF S +Y
Sbjct: 83  KNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLY 142

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y++ G +  A   F +    D V++ +++ GY  +G ++++ E++ E+R+  
Sbjct: 143 VGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSW 202

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  + F++++VL A  +   VK+G+ +HGF +K G  S   + +NN ++ +Y++  +  D
Sbjct: 203 IVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNS--VSVVNNGLLAMYLKFSRPTD 260

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FDE+   D V+++  I          E+  +F +   + F+ +  T+ ++L + G 
Sbjct: 261 ARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGH 319

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L   K I  +  + GF+   ++ N LI +Y KCG +  AR +F+ +  KD+VSWNS+
Sbjct: 320 LRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GY ++G   +A+ +F  M+      +  T   ++   +    LK    +HS+ IKSG 
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGI 439

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            +D S+ + LI  Y KC  + +S ++ + +   + V  N + S  V     A  L++   
Sbjct: 440 YIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQ 499

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +    + +TF + L  CA++     GK IHC  L+  Y+ ++ + +A+I+MY KCG 
Sbjct: 500 MRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E + R F ++ R  +  W  M+  Y  +G   +    F  M K G+ PD + ++A++ +
Sbjct: 560 LESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYA 619

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GLV +       M   + + P +EHYAC+VDLL R   +  A+  I  MPI PDA 
Sbjct: 620 CSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDAS 679

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW S+L AC   G+++       +++EL PD+    +L SN YA+   W+ V  +RK ++
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVR 739

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +K + K PGYSWI +G   H F +GD S  QS+ I+K L  LY  M
Sbjct: 740 DKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLM 785



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 5/182 (2%)

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + + +A ++ ++L + + IH L +    D   F    +ID Y        +   FR++  
Sbjct: 8   AFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSP 67

Query: 542 -DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             ++  WN+++  ++++G + +    + K+ +  V PD+ T+ +V+ +C  AGL      
Sbjct: 68  AKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMG 125

Query: 601 YLSCMSDLH-GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            L     L  G    L     +VD+  R+GLL  A+   D+MP+  D   W SL+S  + 
Sbjct: 126 DLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPV-RDLVSWNSLISGYSS 184

Query: 660 YG 661
           +G
Sbjct: 185 HG 186


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/774 (30%), Positives = 422/774 (54%), Gaps = 26/774 (3%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFA-DFRRAFRFLFDTQNRDIITYNALISGLARF 59
            QI++ + K     D ILS  L+S ++  +     A R   + + R+ +T+N++IS   R 
Sbjct: 264  QIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRR 323

Query: 60   CQSGPALKLFDRLRYQG----LRPDAFTFSSLVKACGSLQENEIVHGVCL-----KLGFS 110
              +  A KLF  ++ +G    LRP+ +T  SLV A  SL +  +V    +     K GF 
Sbjct: 324  GDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFL 383

Query: 111  SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
              +Y+ S  +  +A+ G +  A+M F+   D + V    ++ G     + +++ +VF EM
Sbjct: 384  RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443

Query: 171  RSLGLELNEFSLTAVLGASFDV-------KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
            + L +E+N  SL  +L    +        ++G+++H +  + G +    + + NA++N+Y
Sbjct: 444  KDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARIS-IGNALVNMY 501

Query: 224  VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMI 280
             +C    +A  +F  +   D VSW+  I+         EA   F  ++ N    + +++I
Sbjct: 502  GKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVI 561

Query: 281  NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            + LSS      L  G+QI    +K G    VS+ NAL+++Y +   +N+ + +F  +   
Sbjct: 562  STLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY 621

Query: 341  DSVSWNSMIAGYSE-NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            D VSWNS I   ++      QAL  F  M++    PN  T  +IL AVS+   L    Q+
Sbjct: 622  DQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQI 681

Query: 400  HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASC 458
            H+ I+K     D+++ + L+  YGKC  + + + + S + ++++ V  N++ S  +++  
Sbjct: 682  HALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGI 741

Query: 459  HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
              +A++L   +    ++++G TF+ VL ACA++  LE+G  +H  A++A  + D+ V SA
Sbjct: 742  LHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSA 801

Query: 519  VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
            ++DMY KCG I+ A R F  +   ++  WN+M+ GYA+HG   +   +F +M + G  PD
Sbjct: 802  LVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPD 861

Query: 579  EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
             +T++ VL++C H GLV E   +   M +++GL P++EH++C+VDLLGR G ++  +  I
Sbjct: 862  HVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFI 921

Query: 639  DQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
              MP+ P+  IW+++L AC      N +LG  A   L+EL+P N   YVLLSN++A+ G 
Sbjct: 922  KTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGN 981

Query: 697  WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            W DV + R  M++  + K+ G SW+++    H F AGD +H + ++IY++L +L
Sbjct: 982  WEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKEL 1035



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 189/733 (25%), Positives = 359/733 (48%), Gaps = 33/733 (4%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           L K G   D     TLI+ + +  +   A +   +   +++++++ LISG  +      A
Sbjct: 166 LYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEA 225

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVSGFI 120
             LF  +   GL P+ F   S ++AC       I     +H    KL   S + L +  +
Sbjct: 226 CSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLM 285

Query: 121 ENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-- 177
             Y+  SG I  A   F +    ++V + +++  Y   G+   + ++F  M+  G+EL  
Sbjct: 286 SMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNL 345

Query: 178 --NEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
             NE++L +++ A+  + +      EQ+     K GFL  +  ++ +A++N + R G  +
Sbjct: 346 RPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDL--YVGSALVNGFARYGL-M 402

Query: 231 DAVKM-FDEITEPDVVSWSER---IAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           D  KM F ++ + + V+ +     +A    G EA  +FK+++ +  +IN  +++ LLS+ 
Sbjct: 403 DCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTF 461

Query: 287 GGERIL----RAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
                L    R G+++ A+ ++ G ++  +SIGNAL++MYGKC  +++A S+F  +  KD
Sbjct: 462 TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKD 521

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           +VSWNSMI+G   N  F +A+  F  M    ++P+ +++ S L + S+   L    Q+H 
Sbjct: 522 TVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG 581

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV-YASCHA 460
              K G  LD S+ + L+T Y + +++NE ++V  ++ + + V  N+    L  Y +   
Sbjct: 582 EGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVL 641

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL+ +  +  +    N  TF  +L A ++ + L  G  IH L LK     D  +E+A++
Sbjct: 642 QALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALL 701

Query: 521 DMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
             Y KC  +ED +  F ++  R     WN+M+ GY   G  H+  +L   M + G K D 
Sbjct: 702 AFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDG 761

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+  VL++C     +       +C +    L   +   + +VD+  + G ++ A    +
Sbjct: 762 FTFATVLSACASVATLERGMEVHAC-AVRACLESDVVVGSALVDMYAKCGKIDYASRFFE 820

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL-QPDNESTYVLLSNLYASAGMWN 698
            MP+  + + W S++S    +G+    L   +++ +  Q  +  T+V + +  +  G+ +
Sbjct: 821 LMPV-RNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVD 879

Query: 699 DVGKLRKEMKEKF 711
           +  K  K M E +
Sbjct: 880 EGYKHFKSMGEVY 892



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 272/552 (49%), Gaps = 47/552 (8%)

Query: 74  YQGLRPDAFTFSSL---------VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA 124
           Y  LR   F+ S L          K   SL +   +H    K GF+  V+  +  I  Y 
Sbjct: 127 YTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYV 186

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           + G +VSA   F +    + V+++ ++ GY  N   D++  +F  + S GL  N F++ +
Sbjct: 187 RIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGS 246

Query: 185 VLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC-GQKLDAVKMFDE 238
            L A     S  +K G QIH F  K+  +S +   L+N +M++Y  C G   DA ++FDE
Sbjct: 247 ALRACQQCGSTGIKLGMQIHAFICKLPCVSDMI--LSNVLMSMYSDCSGSIDDAHRVFDE 304

Query: 239 ITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQI----NEYTMINLLSSVG--GE 289
           I   + V+W+  I+  C   D V AF LF  ++    ++    NEYT+ +L+++     +
Sbjct: 305 IKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLAD 364

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   +Q+     K GF+  + +G+AL++ + + G ++ A+ IF  +  +++V+ N ++
Sbjct: 365 CGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLM 424

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ----AMQVHSHIIK 405
            G +      +A  +F  M +   I N  ++  +L   +   +LK+      +VH+++ +
Sbjct: 425 VGLARQHQGEEAAKVFKEMKDLVEI-NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFR 483

Query: 406 SGFLLDDSMIS---CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           SG +  D+ IS    L+  YGKC A++ +  V   +  K+ V  N++ S L +     EA
Sbjct: 484 SGLV--DARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEA 541

Query: 463 LELYRTIWGSCREVNG---STFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
           +  + T+     + NG   S FS++  L +C+++  L  G+ IH    K   D D+ V +
Sbjct: 542 VSCFHTM-----KRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSN 596

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH-GCYHEVSNLFNKMSKFGVK 576
           A++ +Y +  +I + ++ F ++       WN+ +   A++     +    F +M + G +
Sbjct: 597 ALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWR 656

Query: 577 PDEITYLAVLTS 588
           P+ +T++ +L +
Sbjct: 657 PNRVTFINILAA 668



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 16/265 (6%)

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
            S SL  A  +H  + K+GF  D    + LI  Y +   L  ++++  E+ +KN V  + 
Sbjct: 152 TSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSC 211

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA--AMTDLEQGKAIHCLALK 506
           L S         EA  L++ +  S    N       L+AC     T ++ G  IH    K
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK 271

Query: 507 ARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
                D+ + + ++ MY  C G+I+DA R F +I   +   WN+++  Y + G       
Sbjct: 272 LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFK 331

Query: 566 LFNKMSKFGV----KPDEITYLAVLTSCCHAG-----LVREARTYLSCMSDLHGLIPQLE 616
           LF+ M   GV    +P+E T  +++T+ C        L+ +  T +    +  G +  L 
Sbjct: 332 LFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRI----EKSGFLRDLY 387

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQM 641
             + +V+   R GL++ AKM   QM
Sbjct: 388 VGSALVNGFARYGLMDCAKMIFKQM 412


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/763 (30%), Positives = 404/763 (52%), Gaps = 13/763 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I++ L+K+G  L       L+S ++K      A R   +T +   +++++L++  +   
Sbjct: 25  HIHAHLLKSG--LLHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNA 82

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               AL  F  +R +G+R + F    ++K          VH V +  G S  +++ +  +
Sbjct: 83  LPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALV 142

Query: 121 ENYAKSGEIVSAEMCFRDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
             Y   G +  A   F +   D + V++  M+  +V N     + E+F EM   G+  NE
Sbjct: 143 AMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNE 202

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F  + V+ A   S D++ G ++H   V+ G+   V     NA++++Y + G    A  +F
Sbjct: 203 FGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT--ANALVDMYSKLGDIHMAALVF 260

Query: 237 DEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            ++ + DVVSW+  I+          A  L   ++ +    N +T+ ++L +  G     
Sbjct: 261 GKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGA 320

Query: 294 AG--KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
               +QI  F  K        IG AL+ MY K G ++DAR +F+++  KD + WN++I+G
Sbjct: 321 FALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISG 380

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            S  G   ++L +FC M +     N  T+A++L++ ++ +++    QVH+   K GFL D
Sbjct: 381 CSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSD 440

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +++ LI +Y KCN L  + +V  E    N +   ++ + L       +A++L+  +  
Sbjct: 441 SHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLR 500

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              E +    S +L ACA+++  EQGK +H   +K ++  D+F  +A++  Y KCG+IED
Sbjct: 501 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIED 560

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A  AF  +    +  W+AM+ G AQHG      ++F +M    + P+ IT  +VL +C H
Sbjct: 561 ADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNH 620

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV EA+ Y S M ++ G+    EHY+C++DLLGR G L+ A   ++ MP   +A +W 
Sbjct: 621 AGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWG 680

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL+A  ++ + +LG LA  KL  L+P+   T+VLL+N YASAGMW++V K+RK MK+  
Sbjct: 681 ALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSK 740

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + KEP  SW+ +    H F  GD SH ++++IY +L +L + M
Sbjct: 741 VKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLM 783



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 8/285 (2%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +++ +L   + ++SL     +H+H++KSG L   +  + L++ Y KC     ++RV  E 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                V  ++L +     +   EAL  +R +       N     IVLK CA   D   G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CA--PDAGLGV 120

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQH 557
            +H +A+      DIFV +A++ MY   G +++A+R F +  RD  A  WN MM  + ++
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
               +   LF +M   GV+P+E  +  V+ +C  +  + EA   +  M    G    +  
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDL-EAGRKVHAMVVRTGYDKDVFT 239

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
              +VD+  ++G +  A +   ++P   D   W + +S C ++G+
Sbjct: 240 ANALVDMYSKLGDIHMAALVFGKVP-KTDVVSWNAFISGCVLHGH 283


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 233/728 (32%), Positives = 408/728 (56%), Gaps = 15/728 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +YSL +KNG   +  +   +I  F K   F  A R   D    +++ +NA+ISG  +  +
Sbjct: 169 VYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRE 228

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
           +  AL LF ++  +   P++FTFSS++ AC +L+E E    V G  +K G    V++ + 
Sbjct: 229 NWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTA 288

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK  ++  A   F      + V++T ++ G+V   +   +   F EMR +G ++N
Sbjct: 289 IIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKIN 348

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            +++T+VL A  +   +KE  Q+H +  K GF   + +++++A++N+Y + G    + ++
Sbjct: 349 NYTITSVLTACTEPVMIKEAVQLHSWIFKTGFY--LDSNVSSALINMYSKIGVVDLSERV 406

Query: 236 FDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           F E+ +  ++  W+  I+A A  G    A  LF+ +     + +++   ++LS +     
Sbjct: 407 FREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDS--- 463

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I  +  K+G    +S+G++L +MY KCG + ++ ++F+ +  KD+VSW SMI G
Sbjct: 464 LSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITG 523

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +SE+    QA+ +F  ML   + P+  T+ + L A S   SL++  +VH + +++    +
Sbjct: 524 FSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKE 583

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +   L+  Y KC A+  ++RV   + +K+    ++L S         +AL L+  I  
Sbjct: 584 VLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRM 643

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +   ++  T S V+ A A +  L+ G  +H    K   + ++ V S+++ MY KCG+I++
Sbjct: 644 ADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDE 703

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
             + F +I +  L  W AM++ YAQHG   E   +++ M K G KPD +T++ VL++C H
Sbjct: 704 CHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSH 763

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G+V E  ++L+ M+  +G+ P   HYAC+VDLLGR G L+ A+  I+ MPI PDA +W 
Sbjct: 764 NGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWG 823

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            LL+AC ++G+I+LG LA  +++EL+P     YV LSN+ A  G W DV K+R  M+   
Sbjct: 824 ILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTG 883

Query: 712 LCKEPGYS 719
           + KEPG+S
Sbjct: 884 VKKEPGWS 891



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 179/661 (27%), Positives = 339/661 (51%), Gaps = 23/661 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           +  ++ +L+  + K      A R    T + ++I++N LISG  +      + + F ++R
Sbjct: 80  NTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMR 139

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           + G  P+ FT+ S++ AC   GS    E+V+ + LK GF S  Y+ +G I+ +AK     
Sbjct: 140 FSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFE 199

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F+D L  + V + A++ G V N E   + ++F +M       N F+ +++L A  
Sbjct: 200 DALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACA 259

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            ++E   G  + G+ +K G  +G    +  AI++LY +C     AVK F  +   +VVSW
Sbjct: 260 ALEELEFGRGVQGWVIKCG--AGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSW 317

Query: 248 SERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I+      D + AF  FK++R    +IN YT+ ++L++     +++   Q+ ++ +K
Sbjct: 318 TTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFK 377

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALD 363
            GF    ++ +ALI+MY K G V+ +  +F  +   K+   W  MI+ ++++G   +A++
Sbjct: 378 TGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVE 437

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  ML+  L P+ +  +S+L  +    SL     +H +I+K G   D S+ S L T Y 
Sbjct: 438 LFQRMLQEGLRPDKFCSSSVLSIID---SLSLGRLIHCYILKIGLFTDISVGSSLFTMYS 494

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCH---AEALELYRTIWGSCREVNGST 480
           KC +L ES  V  ++  K+ V   + AS++   S H    +A++L+R +       +  T
Sbjct: 495 KCGSLEESYTVFEQMPDKDNV---SWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMT 551

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
            +  L AC+A+  LE+GK +H  AL+AR  +++ V  A+++MY KCG I  A+R F  + 
Sbjct: 552 LTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLP 611

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
           +      ++++ GYAQ+G   +   LF+++    +  D  T  +V+ +      +     
Sbjct: 612 QKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQ 671

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
             +C++ + GL  ++   + +V +  + G ++      +Q+   PD   W +++ +   +
Sbjct: 672 LHACVTKM-GLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVSYAQH 729

Query: 661 G 661
           G
Sbjct: 730 G 730



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 158/605 (26%), Positives = 282/605 (46%), Gaps = 29/605 (4%)

Query: 80  DAFTFSSLVKACG--SLQENEIVHGVCLKLG-FSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D F F S     G  +L+  +I+H   LK     S  ++ +  +  Y KS  +V A   F
Sbjct: 45  DPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLF 104

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
                 + +++  ++ G   N  F+ S   F +MR  G + N+F+  +VL A   +    
Sbjct: 105 DKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPL 164

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            GE ++   +K GF S    ++   +++L+ +     DA+++F ++   +VV W+  I+ 
Sbjct: 165 YGELVYSLALKNGFFSN--GYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISG 222

Query: 254 ACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
           A    E   A  LF  +    F  N +T  ++L++      L  G+ +Q +  K G  E 
Sbjct: 223 AVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGED 282

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V +G A+I +Y KC  ++ A   F  +  ++ VSW ++I+G+ +      A   F  M +
Sbjct: 283 VFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRK 342

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
                N YT+ S+L A +    +K+A+Q+HS I K+GF LD ++ S LI  Y K   ++ 
Sbjct: 343 VGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDL 402

Query: 431 SKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           S+RV  E++  KN      + S    +     A+EL++ +       +    S VL   +
Sbjct: 403 SERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---S 459

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  L  G+ IHC  LK     DI V S++  MY KCG++E++   F ++       W +
Sbjct: 460 IIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWAS 519

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ G+++H    +   LF +M    ++PD++T  A LT+C     + + +       ++H
Sbjct: 520 MITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGK-------EVH 572

Query: 610 GLI------PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           G         ++     +V++  + G +  A+   D +P   D     SL+S     G I
Sbjct: 573 GYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLP-QKDQFSCSSLVSGYAQNGYI 631

Query: 664 DLGLL 668
           +  LL
Sbjct: 632 EDALL 636



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 254/485 (52%), Gaps = 33/485 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
           Q++S + K G +LD  +S+ LI+ ++K        R FR +  T+N  +  +  +IS  A
Sbjct: 370 QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKN--LAMWAVMISAFA 427

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   +G A++LF R+  +GLRPD F  SS++    SL    ++H   LK+G  + + + S
Sbjct: 428 QSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFTDISVGS 487

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                Y+K G +  +   F    D DNV++ +M+ G+  +   +++ ++F EM    +  
Sbjct: 488 SLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRP 547

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +LTA L A      +++G+++HG+ ++      V   +  A++N+Y +CG  + A +
Sbjct: 548 DQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVL--VGGALVNMYSKCGAIVLARR 605

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + + D  S S  ++  A +G   +A  LF ++R  D  I+ +T+ +++ +V     
Sbjct: 606 VFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNS 665

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G Q+ A   K+G    VS+G++L++MY KCG +++   +F+ +   D +SW +MI  
Sbjct: 666 LDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVS 725

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-------- 403
           Y+++G   +AL ++  M +    P+  T   +L A S++  +++    +SH+        
Sbjct: 726 YAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEG---YSHLNSMAKEYG 782

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA- 462
           I+ G+       +C++   G+   L E++R ++ +     +  +AL   ++ A+C     
Sbjct: 783 IEPGYY----HYACMVDLLGRSGRLKEAERFINNM----PIEPDALLWGILLAACKVHGD 834

Query: 463 LELYR 467
           +EL R
Sbjct: 835 IELGR 839



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 223/472 (47%), Gaps = 11/472 (2%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND 271
           + N++M  Y +    + A+++FD+   P+V+SW+  I+         +++  F  +RF+ 
Sbjct: 83  MTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSG 142

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F  N++T  ++LS+         G+ + +   K GF     +   +I ++ K     DA 
Sbjct: 143 FDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDAL 202

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F  ++ ++ V WN++I+G  +N     ALD+FC M     +PN +T +SIL A +  +
Sbjct: 203 RVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALE 262

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L+    V   +IK G   D  + + +I  Y KC  ++++ +    +  +N V    + S
Sbjct: 263 ELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIIS 322

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             V       A   ++ +     ++N  T + VL AC     +++   +H    K  +  
Sbjct: 323 GFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYL 382

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           D  V SA+I+MY K G ++ ++R FR++    +LA W  M+  +AQ G       LF +M
Sbjct: 383 DSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRM 442

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            + G++PD+    +VL+      L R    Y+  +    GL   +   + +  +  + G 
Sbjct: 443 LQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKI----GLFTDISVGSSLFTMYSKCGS 498

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL--ELQPDN 680
           LE +    +QMP   D   W S+++  + + + +  +    ++L  E++PD 
Sbjct: 499 LEESYTVFEQMP-DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQ 549


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/736 (32%), Positives = 395/736 (53%), Gaps = 21/736 (2%)

Query: 35  FRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGS 93
           F  L    +R++ T N+ I+ + +      AL  F+   +   ++ ++ T+ +L+ AC S
Sbjct: 111 FVCLIKQHSRELST-NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTS 169

Query: 94  ---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTA 149
              L+  + +H   LK      + L +  +  Y K G +  A   F D + L NV ++T 
Sbjct: 170 IRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAF-DTMQLRNVVSWTI 228

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVG 206
           M+ GY  NG+ + +  ++++M   G   +  +  +++ A   + D+  G Q+HG  +K  
Sbjct: 229 MISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIK-- 286

Query: 207 FLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAF 261
             SG  +HL   NA++++Y R GQ + A  +F  I+  D++SW+  I         +EA 
Sbjct: 287 --SGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEAL 344

Query: 262 GLFKDL-RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
            LF+D+ R   +Q NE+   ++ S+         G+QI   C K G    V  G +L  M
Sbjct: 345 YLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDM 404

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y K G +  A   F  +   D VSWN++IA +S++G  N+A+  FC M+   L+P+G T 
Sbjct: 405 YAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITF 464

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-D 439
            S+L A  +  ++ Q  Q+HS+IIK G   + ++ + L+T Y KC+ L+++  V  ++ +
Sbjct: 465 LSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSE 524

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
             N V  NA+ S  +      E   L++ +  S  + +  T + +L  CA +  LE G  
Sbjct: 525 NANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQ 584

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +HC ++K+    D+ V + +IDMY KCG+++ A+  F       +  W+++++GYAQ G 
Sbjct: 585 VHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGL 644

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
            HE  NLF  M   GV+P+E+TYL VL++C H GLV E   + + M    G+ P  EH +
Sbjct: 645 GHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVS 704

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           C+VDLL R G L  A+  I +M   PD  +W++LL++C  +GN+D+   A   +L+L P 
Sbjct: 705 CMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPS 764

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
           N +  VLLSN++AS G W +V +LR  MK+  + K PG SWI V    H F++ D+SH Q
Sbjct: 765 NSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQ 824

Query: 740 SKEIYKELIKLYEHMV 755
             +IY  L  L+  M+
Sbjct: 825 RGDIYTMLEDLWLQML 840



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 163/624 (26%), Positives = 294/624 (47%), Gaps = 51/624 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I+  ++K+    D +L   +++ + K    + A R  FDT Q R+++++  +ISG ++ 
Sbjct: 178 KIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDA-RKAFDTMQLRNVVSWTIMISGYSQN 236

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            Q   A+ ++ ++   G  PD  TF S++KAC   G +     +HG  +K G+   +   
Sbjct: 237 GQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQ 296

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
           +  I  Y + G+IV A   F      D +++ +M+ G+   G   ++  +F +M   G  
Sbjct: 297 NALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFY 356

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NEF   +V  A   + E   G QIHG   K G    V      ++ ++Y + G    A
Sbjct: 357 QPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNV--FAGCSLCDMYAKFGFLPSA 414

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           ++ F +I  PD+VSW+  IAA  D     EA   F  +       +  T ++LL + G  
Sbjct: 415 IRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSP 474

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWNSM 348
             +  G QI ++  K+G  +  ++ N+L++MY KC  ++DA ++F D     + VSWN++
Sbjct: 475 VTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAI 534

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++   ++    +   +F  ML     P+  T+ +IL   +   SL+   QVH   +KSG 
Sbjct: 535 LSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGL 594

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           ++D S+ + LI  Y KC +L  ++ V       + V  ++L           EAL L+R 
Sbjct: 595 VVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRM 654

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQG-----------------KAIHCLA-LKAR-- 508
           +     + N  T+  VL AC+ +  +E+G                 + + C+  L AR  
Sbjct: 655 MKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAG 714

Query: 509 --YDQDIFVE----SAVIDMY------CKC-GTIEDAKRAFRKICRDSLAGWNAMMM--- 552
             Y+ + F++    +  I M+      CK  G ++ A+RA   I +   +   A+++   
Sbjct: 715 CLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSN 774

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVK 576
            +A  G + EV+ L N M + GV+
Sbjct: 775 IHASVGNWKEVARLRNLMKQMGVQ 798


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/694 (32%), Positives = 365/694 (52%), Gaps = 15/694 (2%)

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           L  +G + D++ +  L+++C     L   + VH   L+ G    VY+++  ++ Y   G 
Sbjct: 35  LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +  A   F    +   V++  M+ GY   G   ++  +F  M+  GLE ++F+  ++L A
Sbjct: 95  VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154

Query: 189 ---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
                 +  G ++H   ++ G  +     + NA++++Y +CG   DA ++FD +   D V
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNAT--VGNALISMYAKCGSVRDARRVFDAMASRDEV 212

Query: 246 SWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+    A  +     E+   +  +     + +  T +N+LS+ G    L  GKQI A  
Sbjct: 213 SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI 272

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            +      V +  AL  MY KCG V DAR +F+ L  +D ++WN+MI G  ++G   +A 
Sbjct: 273 VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAH 332

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            MF  ML+  + P+  T  +IL A +    L    ++H+  +K G + D    + LI  Y
Sbjct: 333 GMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMY 392

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH--AEALELYRTIWGSCREVNGST 480
            K  ++ ++++V   + K++ V   AL  V  YA C    E+   ++ +     E N  T
Sbjct: 393 SKAGSMKDARQVFDRMPKRDVVSWTAL--VGGYADCGQVVESFSTFKKMLQQGVEANKIT 450

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +  VLKAC+    L+ GK IH   +KA    D+ V +A++ MY KCG++EDA R    + 
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
              +  WN ++ G AQ+G   E    F  M    ++P+  T++ V+++C    LV E R 
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRR 570

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
             + M   +G++P  +HYAC+VD+L R G L  A+  I  MP  P A +W +LL+AC  +
Sbjct: 571 QFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAH 630

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           GN+++G  A  + L+L+P N  TYV LS +YA+AGMW DV KLRK MKE+ + KEPG SW
Sbjct: 631 GNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSW 690

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           I V G  H F AGD SH +++EIY EL  L + +
Sbjct: 691 IEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQI 724



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 270/572 (47%), Gaps = 19/572 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  +++ G   +  +  TL+  +        A R      N+ ++++N +ISG A   
Sbjct: 65  QVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRG 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A  LF  ++ +GL PD FTF S++ AC S   L     VH   ++ G ++   + +
Sbjct: 125 LGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAK G +  A   F      D V++T +   Y  +G   +S + +  M   G+  
Sbjct: 185 ALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRP 244

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +   VL   G+   +++G+QIH   V+    S V   ++ A+  +Y++CG   DA +
Sbjct: 245 SRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV--RVSTALTKMYIKCGAVKDARE 302

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ +   DV++W+  I    D     EA G+F  +       +  T + +LS+      
Sbjct: 303 VFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGG 362

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK+I A   K G +  V  GNALI+MY K G + DAR +FD +  +D VSW +++ G
Sbjct: 363 LACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGG 422

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++ G   ++   F  ML+  +  N  T   +L+A SN  +LK   ++H+ ++K+G   D
Sbjct: 423 YADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFAD 482

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            ++ + L++ Y KC ++ ++ RV   +  ++ V  N L   L       EAL+ +  +  
Sbjct: 483 LAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKS 542

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKCG 527
                N +TF  V+ AC     +E+G+         R D  I       + ++D+  + G
Sbjct: 543 EEMRPNATTFVNVMSACRVRNLVEEGRRQFA---SMRKDYGIVPTEKHYACMVDILARAG 599

Query: 528 TIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
            + +A+     +  + S A W A++     HG
Sbjct: 600 HLGEAEDVILTMPFKPSAAMWGALLAACRAHG 631


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 246/756 (32%), Positives = 407/756 (53%), Gaps = 27/756 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLF-DR 71
           D +L T L++ ++   D       +F+   R ++  +NAL+SG  R      A+ +F + 
Sbjct: 128 DVVLITRLVTMYS-ICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEM 186

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +      PD FT   ++KAC  + +    E VHG  LK    S V++ +  I  Y K G 
Sbjct: 187 ISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGF 246

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS--LGLELNEFSLTAVL 186
           + SA   F      + V++ +++   + NG F++S  +F  + +   GL  +  ++  V+
Sbjct: 247 VESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVI 306

Query: 187 ---GASFDVKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITE 241
                  +V+ G   HG  +K+G    +C  L  N++++++Y +CG   +A  +FD   E
Sbjct: 307 PLCARQGEVRLGMVFHGLALKLG----LCGELKVNSSLLDMYSKCGYLCEARVLFD-TNE 361

Query: 242 PDVVSWSERIAAAC---DGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQ 297
            +V+SW+  I       D   AF L + ++  D  ++NE T++N+L     E      K+
Sbjct: 362 KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKE 421

Query: 298 IQAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           I  +  + GF++    + NA ++ Y KCG ++ A  +F  +  K   SWN++I G+ +NG
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
           F  +ALD++  M    L P+ +T+AS+L A +  KSL    ++H  ++++GF LD+ +  
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICI 541

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ Y +C  +  +K     +++KN V  N + +         +AL+++  +  S  ++
Sbjct: 542 SLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSS--KI 599

Query: 477 NGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
                SI+  L AC+ ++ L  GK +HC A+K+   +  FV  ++IDMY KCG +E ++ 
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F ++       WN ++ GY  HG   +   LF  M   G +PD +T++A+LT+C HAGL
Sbjct: 660 IFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGL 719

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E   YL  M  L G+ P+LEHYAC+VD+LGR G L  A   ++++P  PD+ IW SLL
Sbjct: 720 VAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           S+C  Y ++D+G    +KLLEL PD    YVL+SN YA  G W++V K+R+ MKE  L K
Sbjct: 780 SSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + G SWI +GG    F  GD S  QS +I +  I+L
Sbjct: 840 DAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIEL 875



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 155/317 (48%), Gaps = 7/317 (2%)

Query: 279 MINLLSSVGGE-RILRAGKQIQAF-CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +I LL  + GE + +  G++I  F      F   V +   L++MY  C    D+  +F+ 
Sbjct: 95  LIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNA 154

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQ 395
              K+   WN++++GY  N  F  A+ +F  M+  +  +P+ +T+  +++A      ++ 
Sbjct: 155 SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL 214

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
              VH   +K+  L D  + + LI  YGK   +  + +V  ++ ++N V  N++    + 
Sbjct: 215 GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLE 274

Query: 456 ASCHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                E+  L++ +      +  + +T   V+  CA   ++  G   H LALK     ++
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGEL 334

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-K 572
            V S+++DMY KCG + +A+  F    ++ ++ WN+M+ GY++   +     L  KM  +
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFDTNEKNVIS-WNSMIGGYSKDRDFRGAFELLRKMQME 393

Query: 573 FGVKPDEITYLAVLTSC 589
             VK +E+T L VL  C
Sbjct: 394 DKVKVNEVTLLNVLPVC 410



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 123/265 (46%), Gaps = 18/265 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  +++NG  LD  +  +L+S + +      A  F  + + ++++ +N +I+G ++  
Sbjct: 523 EIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE 582

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL +F ++    + PD  +    + AC    +L+  + +H   +K   +   ++  
Sbjct: 583 FPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTC 642

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G +  ++  F        V +  ++ GY  +G   K+ E+F  M++ G   
Sbjct: 643 SLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRP 702

Query: 178 NEFSLTAVLGASFD---VKEGEQIHG-----FGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           +  +  A+L A      V EG +  G     FG+K       C      ++++  R G+ 
Sbjct: 703 DSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYAC------VVDMLGRAGRL 756

Query: 230 LDAVKMFDEITE-PDVVSWSERIAA 253
            +A+++ +E+ + PD   WS  +++
Sbjct: 757 NEALELVNELPDKPDSRIWSSLLSS 781


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 233/730 (31%), Positives = 393/730 (53%), Gaps = 14/730 (1%)

Query: 36  RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
             +FD  + R I T+NA++ G     ++  AL+++  +R+ G+  D++TF  L+KACG +
Sbjct: 12  EMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIV 71

Query: 95  QE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAM 150
           ++      +HG+ +K G  S V++V+  +  YAK  +I  A   F R  +  D V++ ++
Sbjct: 72  EDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSI 131

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           +  Y  NG   ++  +F EM   G+  N ++  A L A  D   +K G QIH   +K G 
Sbjct: 132 ISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGR 191

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLF 264
           +  V  ++ NA++ +YVR G+  +A  +F  +   D+V+W+  +          EA   F
Sbjct: 192 VLDV--YVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFF 249

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
            DL+  D + ++ ++I+++ + G    L  GK+I A+  K GF   + +GN LI MY KC
Sbjct: 250 YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC 309

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             ++     FD +  KD +SW +  AGY++N  + QAL++   +    +  +   + SIL
Sbjct: 310 CCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A      L +  ++H + I+ G L D  + + +I  YG+C  ++ + R+   I+ K+ V
Sbjct: 370 LACRGLNCLGKIKEIHGYTIRGG-LSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVV 428

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              ++ S  V+     +ALE++ ++  +  E +  T   +L A  +++ L++GK IH   
Sbjct: 429 SWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFI 488

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           ++  +  +  + + ++DMY +CG++EDA + F      +L  W AM+  Y  HG      
Sbjct: 489 IRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAV 548

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF +M    + PD IT+LA+L +C H+GLV E +++L  M   + L P  EHY C+VDL
Sbjct: 549 ELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDL 608

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR   LE A   +  M   P   +W +LL AC I+ N ++G +A  KLLEL  DN   Y
Sbjct: 609 LGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNY 668

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VL+SN++A+ G W DV ++R  MK   L K PG SWI VG   H F + D  H +  +IY
Sbjct: 669 VLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIY 728

Query: 745 KELIKLYEHM 754
           ++L ++ E +
Sbjct: 729 QKLAQVTEKL 738



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 167/581 (28%), Positives = 294/581 (50%), Gaps = 28/581 (4%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K G ++ AEM F    +     + AM+ GYV NGE   + E++ EMR LG+  + ++ 
Sbjct: 2   YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61

Query: 183 TAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
             +L A   V++   G +IHG  +K G  S V   + N+++ LY +C     A K+FD +
Sbjct: 62  PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFV--FVVNSLVALYAKCNDINGARKLFDRM 119

Query: 240 -TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
               DVVSW+  I+A + +G+  EA  LF ++       N YT    L +      ++ G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
            QI A   K G +  V + NAL++MY + G++ +A  IF  L  KD V+WNSM+ G+ +N
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G +++AL+ F  +    L P+  ++ SI+ A      L    ++H++ IK+GF  +  + 
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + LI  Y KC  ++   R    +  K+ +     A+      C+ +ALEL R +     +
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           V+ +    +L AC  +  L + K IH   ++     D  +++ +ID+Y +CG I+ A R 
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRI 418

Query: 536 FRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
           F  I C+D ++ W +M+  Y  +G  ++   +F+ M + G++PD +T +++L++ C    
Sbjct: 419 FESIECKDVVS-WTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLST 477

Query: 595 VREARTYLSCMSDLHGLIPQ----LEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           +++ +       ++HG I +    LE      +VD+  R G +E A   I       +  
Sbjct: 478 LKKGK-------EIHGFIIRKGFILEGSISNTLVDMYARCGSVEDA-YKIFTCTKNRNLI 529

Query: 649 IWQSLLSACTI--YGNIDLGLLAGSKLLELQPDNESTYVLL 687
           +W +++SA  +  YG   + L    K  ++ PD+ +   LL
Sbjct: 530 LWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALL 570



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 240/480 (50%), Gaps = 23/480 (4%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFG---LFKDLRFNDFQINEYT 278
           +Y +CG  LDA  +FD+++E  + +W+  +       EA G   +++++R      + YT
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
              LL + G    L  G +I     K G    V + N+L+++Y KC  +N AR +FD + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 339 FK-DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
            + D VSWNS+I+ YS NG   +AL +F  ML+  ++ N YT A+ L+A  +S  +K  M
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q+H+ I+KSG +LD  + + L+  Y +   + E+  +   ++ K+ V  N++ +  +   
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
            ++EALE +  +  +  + +  +   ++ A   +  L  GK IH  A+K  +D +I V +
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            +IDMY KC  +    RAF  +    L  W     GYAQ+ CY +   L  ++   G+  
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 578 DEITYLAVLTSC----CHAGLVREARTYL--SCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
           D     ++L +C    C  G ++E   Y     +SD     P L++   I+D+ G  G++
Sbjct: 361 DATMIGSILLACRGLNC-LGKIKEIHGYTIRGGLSD-----PVLQN--TIIDVYGECGII 412

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIY---GNIDLGLLAGSKLLELQPDNESTYVLLS 688
           + A    + +    D   W S++S C ++    N  L + +  K   L+PD  +   +LS
Sbjct: 413 DYAVRIFESIEC-KDVVSWTSMIS-CYVHNGLANKALEVFSSMKETGLEPDYVTLVSILS 470



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 234/457 (51%), Gaps = 15/457 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ ++K+G  LD  ++  L++ + +F     A     + + +DI+T+N++++G  +  
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL+ F  L+   L+PD  +  S++ A G L      + +H   +K GF S + + +
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK   +      F      D +++T    GY  N  + ++ E+  +++  G+++
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   + ++L A   +    + ++IHG+ ++ G    V   L N I+++Y  CG    AV+
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV---LQNTIIDVYGECGIIDYAVR 417

Query: 235 MFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ I   DVVSW+  I+    +G+  +A  +F  ++    + +  T++++LS+V     
Sbjct: 418 IFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLST 477

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ GK+I  F  + GF+   SI N L+ MY +CG V DA  IF     ++ + W +MI+ 
Sbjct: 478 LKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISA 537

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G+   A+++F  M +  +IP+  T  ++L A S+S  + +  +    I+K  + L+
Sbjct: 538 YGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEG-KSFLEIMKCEYQLE 596

Query: 412 --DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                 +CL+   G+ N L E+ +++  +  +    +
Sbjct: 597 PWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEV 633


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/680 (32%), Positives = 368/680 (54%), Gaps = 16/680 (2%)

Query: 87  LVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           L++AC    SL E + +H   LK   ++   ++      Y    ++V A   F +  +  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHG 200
            + +  ++  Y WNG FD + +++  M  LG+  N+++   VL A      +++G +IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA-----C 255
                G  S V   +  A+++ Y +CG  ++A ++F  ++  DVV+W+  IA       C
Sbjct: 134 HAKMFGLESDV--FVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           D  +A  L   ++      N  T++ +L +VG  + L  GK +  +C +  F   V +G 
Sbjct: 192 D--DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLI 374
            L+ MY KC  +  AR IFD +  ++ VSW++MI GY  +    +AL++F  M L+ ++ 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P   T+ S+L A +    L +  ++H +IIK G +LD  + + L++ Y KC  ++++ R 
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             E++ K++V  +A+ S  V     A AL ++R +  S  + + +T   VL AC+ +  L
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + G   H   +   +  D  + +A+IDMY KCG I  A+  F ++ R  +  WNAM++GY
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HG   E   LF+ +   G+KPD+IT++ +L+SC H+GLV E R +   MS    ++P+
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EH  C+VD+LGR GL++ A   I  MP  PD  IW +LLSAC I+ NI+LG     K+ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            L P++   +VLLSN+Y++AG W+D   +R   K+  L K PG SWI + G  H F  GD
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGD 669

Query: 735 SSHSQSKEIYKELIKLYEHM 754
            SH Q  +I ++L +L   M
Sbjct: 670 QSHLQLSQINRKLEELLVEM 689



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 250/511 (48%), Gaps = 18/511 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+   +KN  + D  +   L   +        A R   +  N  +I +N +I   A   
Sbjct: 29  KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA--- 85

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVY 114
            +GP   A+ L+  + + G+RP+ +T+  ++KAC  L   ++   +H      G  S V+
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF 145

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ YAK G +V A+  F      D VA+ AM+ G    G  D + ++ ++M+  G
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  ++  VL   G +  +  G+ +HG+ V+  F +GV   +   ++++Y +C   L 
Sbjct: 206 ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV--VGTGLLDMYAKCQCLLY 263

Query: 232 AVKMFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFND-FQINEYTMINLLSSVG 287
           A K+FD +   + VSWS  I    A D + EA  LF  +   D       T+ ++L +  
Sbjct: 264 ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  G+++  +  K+G +  + +GN L+SMY KCG ++DA   FD +  KDSVS+++
Sbjct: 324 KLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSA 383

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +++G  +NG    AL +F  M    + P+  TM  +L A S+  +L+     H ++I  G
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 443

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           F  D  + + LI  Y KC  ++ ++ V + +D+ + V  NA+           EAL L+ 
Sbjct: 444 FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFH 503

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            +     + +  TF  +L +C+    + +G+
Sbjct: 504 DLLALGLKPDDITFICLLSSCSHSGLVMEGR 534



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 223/457 (48%), Gaps = 39/457 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + T L+  + K      A R      +RD++ +NA+I+G + +     A++L  +++
Sbjct: 143 DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+ P++ T   ++   G   +L   + +HG C++  F + V + +G ++ YAK   ++
Sbjct: 203 EEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL 262

Query: 131 SAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGA 188
            A   F D + + N V+++AM+ GYV +    ++ E+F +M     ++    +L +VL A
Sbjct: 263 YARKIF-DVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRA 321

Query: 189 S---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
                D+  G ++H + +K+G +  +   L N ++++Y +CG   DA++ FDE+   D V
Sbjct: 322 CAKLTDLSRGRKLHCYIIKLGSVLDIL--LGNTLLSMYAKCGVIDDAIRFFDEMNPKDSV 379

Query: 246 SWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           S+S  I + C    +   A  +F+ ++ +    +  TM+ +L +      L+ G     +
Sbjct: 380 SFSA-IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 438

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
               GF     I NALI MY KCG+++ AR +F+ +   D VSWN+MI GY  +G   +A
Sbjct: 439 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS----- 416
           L +F  +L   L P+  T   +L + S           HS ++  G L  D+M       
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLSSCS-----------HSGLVMEGRLWFDAMSRDFSIV 547

Query: 417 -------CLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                  C++   G+   ++E+   +  +  +  V I
Sbjct: 548 PRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/726 (33%), Positives = 387/726 (53%), Gaps = 25/726 (3%)

Query: 41  TQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACG---SL 94
           TQN+     NA I+   +FC+ G    A++L  + +   L  +  ++ S+++ C    SL
Sbjct: 61  TQNQ-----NAKIN---KFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSL 110

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           ++ + VH V +  G S    L +  +  Y   G++V     F   ++     +  ++  Y
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGV 211
              G F +S  +F +M+ LG+  N ++ T VL    A   VKE +++HG+ +K+GF  G 
Sbjct: 171 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGF--GS 228

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI-AAACDGVEAFGL--FKDLR 268
              + N+++  Y + G    A  +FDE++EPDVVSW+  I     +G    GL  F  + 
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 288

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
               +++  T++++L +      L  G+ +  F  K  F E V   N L+ MY KCG +N
Sbjct: 289 ILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 348

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            A  +F  +     VSW S+IA Y   G ++ A+ +F  M    + P+ YT+ SI+ A +
Sbjct: 349 GATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 408

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
            S SL +   VHS++IK+G   +  + + LI  Y KC ++ E++ V S+I  K+ V  N 
Sbjct: 409 CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 468

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +           EALEL+  +    +  +  T + VL ACA +  L++G+ IH   L+  
Sbjct: 469 MIGGYSQNLLPNEALELFLDMQKQFKP-DDITMACVLPACAGLAALDKGREIHGHILRRG 527

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           Y  D+ V  A++DMY KCG +  A+  F  I +  L  W  M+ GY  HG  +E  + FN
Sbjct: 528 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 587

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M   G++PDE ++ A+L +C H+GL+ E   + + M +  G+ P+LEHYAC+VDLL R+
Sbjct: 588 EMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 647

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  A   I+ MPI PD  IW  LLS C I+ ++ L       + EL+PDN   YV+L+
Sbjct: 648 GNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLA 707

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YA A  W +V KLRK M+++   + PG SWI VGG  + F AG+S H Q+K+I   L 
Sbjct: 708 NVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLS 767

Query: 749 KLYEHM 754
           KL   M
Sbjct: 768 KLTMQM 773



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 210/407 (51%), Gaps = 12/407 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  ++K G   +  +  +LI+ + KF     A     +    D++++N++I+G     
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            SG  L++F ++   G+  D  T  S++ AC   G+L     +HG  +K  FS  V   +
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G +  A   F    D   V++T+++  YV  G +  +  +F EM+S G+  
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++T+++ A   S  + +G  +H + +K G  S +   + NA++N+Y +CG   +A  
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL--PVTNALINMYAKCGSVEEARL 453

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F +I   D+VSW+  I      +   EA  LF D++   F+ ++ TM  +L +  G   
Sbjct: 454 VFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAA 512

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G++I     + G+   + +  AL+ MY KCG +  A+ +FD +  KD +SW  MIAG
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           Y  +GF N+A+  F  M    + P+  + ++IL A S+S  L +  +
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWK 619



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 189/402 (47%), Gaps = 25/402 (6%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           + S TL+  ++K  +   A        +  I+++ ++I+   R      A+ LFD ++ +
Sbjct: 332 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSK 391

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+RPD +T +S+V AC    SL +   VH   +K G  S + + +  I  YAK G +  A
Sbjct: 392 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 451

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
            + F      D V++  M+ GY  N   +++ E+F++M+    + ++ ++  VL A    
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGL 510

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             + +G +IHG  ++ G+ S +  H+  A++++Y +CG  + A  +FD I + D++SW+ 
Sbjct: 511 AALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 568

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFCYKV 305
            IA       G EA   F ++R    + +E +   +L++     +L  G K   +   + 
Sbjct: 569 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNEC 628

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENGFFNQALDM 364
           G    +     ++ +  + G ++ A    + +  K D+  W  +++G   +     A  +
Sbjct: 629 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKV 688

Query: 365 FCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQAMQ 398
             H+ E        + ++ N Y  A   E V   K L++ MQ
Sbjct: 689 AEHIFELEPDNTRYYVVLANVYAEAEKWEEV---KKLRKRMQ 727


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/745 (30%), Positives = 399/745 (53%), Gaps = 9/745 (1%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   LIS ++K      A R   +  +   +++++L++  +       A++ F  +R +G
Sbjct: 39  LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG 98

Query: 77  LRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           +  + F    ++K     Q    VH + +  GF S V++ +  +  Y   G +  A   F
Sbjct: 99  VCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVF 158

Query: 137 RDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDV 192
            +     N V++  ++  YV N +   + +VF EM   G++  EF  + V+ A   S ++
Sbjct: 159 DEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNI 218

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G Q+H   V++G+   V     NA++++YV+ G+   A  +F+++ + DVVSW+  I+
Sbjct: 219 DAGRQVHAMVVRMGYEKDVFT--ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALIS 276

Query: 253 A-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
               +G +  A  L   ++ +    N + + ++L +  G      G+QI  F  K     
Sbjct: 277 GCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADS 336

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
              IG  L+ MY K   ++DA  +FD++  +D + WN++I+G S  G  ++A  +F  + 
Sbjct: 337 DDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLR 396

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  L  N  T+A++L++ ++ ++     QVH+   K GF+ D  +++ LI +Y KC+ L+
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLS 456

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           ++ RV  E    + + + ++ + L        A++L+  +     E +    S +L ACA
Sbjct: 457 DAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 516

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           +++  EQGK +H   +K ++  D F  +A++  Y KCG+IEDA+ AF  +    +  W+A
Sbjct: 517 SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSA 576

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ G AQHG       LF +M   G+ P+ IT  +VL +C HAGLV EA+ Y + M ++ 
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 636

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G+    EHY+C++DLLGR G L+ A   ++ MP   +A +W +LL A  ++ + +LG LA
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLA 696

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
             KL  L+P+   T+VLL+N YAS+GMWN+V K+RK MK+  + KEP  SW+ V    H 
Sbjct: 697 AEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT 756

Query: 730 FYAGDSSHSQSKEIYKELIKLYEHM 754
           F  GD SH  +KEIY +L +L + M
Sbjct: 757 FIVGDKSHPMTKEIYSKLDELGDLM 781



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 207/423 (48%), Gaps = 14/423 (3%)

Query: 170 MRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           MRS G    + +  A   A   +  G  +H   +K GFL+ + NHL    ++ Y +C + 
Sbjct: 1   MRSAGTISQQLTRYAAAQA---LLPGAHLHANLLKSGFLASLRNHL----ISFYSKCRRP 53

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++FDEI +P  VSWS  + A + +G+   A   F  +R      NE+ +  +L  V
Sbjct: 54  CCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCV 113

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSW 345
              ++   G Q+ A     GF   V + NAL++MYG  G ++DAR +FD     +++VSW
Sbjct: 114 PDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSW 170

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N +++ Y +N     A+ +F  M+   + P  +  + ++ A + S+++    QVH+ +++
Sbjct: 171 NGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVR 230

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G+  D    + L+  Y K   ++ +  +  ++   + V  NAL S  V       A+EL
Sbjct: 231 MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
              +  S    N    S +LKACA     + G+ IH   +KA  D D ++   ++DMY K
Sbjct: 291 LLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
              ++DA + F  +    L  WNA++ G +  G + E  ++F  + K G+  +  T  AV
Sbjct: 351 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410

Query: 586 LTS 588
           L S
Sbjct: 411 LKS 413



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 153/326 (46%), Gaps = 25/326 (7%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T++  L   + +++L     +H++++KSGFL   S+ + LI+ Y KC     ++RV  EI
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEI 63

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                V  ++L +          A++ +  +       N     +VLK    + D + G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDAQLGA 120

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQH 557
            +H +A+   +  D+FV +A++ MY   G ++DA+R F +   +  A  WN +M  Y ++
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
               +   +F +M   G++P E  +  V+ +C  +  +   R        +H ++ ++ +
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGR-------QVHAMVVRMGY 233

Query: 618 YA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLA 669
                    +VD+  ++G ++ A +  ++MP   D   W +L+S C + G+    + LL 
Sbjct: 234 EKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHDHRAIELLL 292

Query: 670 GSKLLELQPDNESTYVLLSNLYASAG 695
             K   L P+    ++L S L A AG
Sbjct: 293 QMKSSGLVPN---VFMLSSILKACAG 315



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L  K G   D  +   LI  + K +    A R   +  + DII   ++I+ L++  
Sbjct: 425 QVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD 484

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               A+KLF  +  +GL PD F  SSL+ AC SL   ++ + VH   +K  F S  +  +
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G I  AE+ F    +   V+++AM+ G   +G   ++ E+F  M   G+  
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604

Query: 178 NEFSLTAVLGA 188
           N  ++T+VL A
Sbjct: 605 NHITMTSVLCA 615



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ LIK     D      L+  + K      A         R +++++A+I GLA+  
Sbjct: 526 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 585

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL+LF R+  +G+ P+  T +S++ AC
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCAC 616


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/680 (32%), Positives = 372/680 (54%), Gaps = 11/680 (1%)

Query: 80  DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D+ T+  L + C  L++    + V    ++ G    +Y ++  I+ ++  G ++ A   F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVK 193
               +   V + A++ GY   G   ++  +F +M    +E +  +   VL A      +K
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI-- 251
            G++ H   +KVGF+S     +  A++++YV+ G    A ++FD + + DV +++  I  
Sbjct: 180 LGKEFHAQVIKVGFVSDF--RIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGG 237

Query: 252 -AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A + DG +AF LF  ++   F+ N  + +++L        L  GK + A C   G ++ 
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V +  ALI MY  CG +  AR +FD +  +D VSW  MI GY+EN     A  +F  M E
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + P+  T   I+ A ++S  L  A ++HS ++++GF  D  + + L+  Y KC A+ +
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +++V   + +++ V  +A+    V   C  EA E +  +  +  E +  T+  +L AC  
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           +  L+ G  I+  A+KA     I V +A+I+M  K G+IE A+  F  + +  +  WN M
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVM 537

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + GY+ HG   E  +LF++M K   +P+ +T++ VL++C  AG V E R + S + D  G
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRG 597

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           ++P +E Y C+VDLLGR G L+ A++ I++MP+ P++ IW +LL+AC IYGN+D+   A 
Sbjct: 598 IVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAA 657

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
            + L  +P + + YV LS++YA+AGMW +V K+RK M+ + + KE G +WI V G  H F
Sbjct: 658 ERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTF 717

Query: 731 YAGDSSHSQSKEIYKELIKL 750
              D SH Q+ EIY EL +L
Sbjct: 718 VVEDRSHPQAGEIYAELARL 737



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 236/469 (50%), Gaps = 14/469 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           + ++ +IK G   D  + T L+S + K      A +       RD+ T+N +I G A+  
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A +LF R++ +G +P+  +F S++  C +   L   + VH  C+  G    V + +
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y   G I  A   F      D V++T M+ GY  N   + +  +F  M+  G++ 
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQP 362

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +   ++ A   S D+    +IH   V+ GF + +   ++ A++++Y +CG   DA +
Sbjct: 363 DRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLL--VDTALVHMYAKCGAIKDARQ 420

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD ++  DVVSWS  I A  +   G EAF  F  ++ N+ + +  T INLL++ G    
Sbjct: 421 VFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGA 480

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G +I     K   +  + +GNALI+M  K G +  AR IF+ ++ +D V+WN MI G
Sbjct: 481 LDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGG 540

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           YS +G   +ALD+F  ML+    PN  T   +L A S +  +++  +  S+++   G + 
Sbjct: 541 YSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVP 600

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKK--NAVHINALASVLVYAS 457
              +  C++   G+   L+E++ +++ +  K  +++    LA+  +Y +
Sbjct: 601 TMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGN 649



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 258/543 (47%), Gaps = 12/543 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+   +I++G  L+     TLI   +   +   A +     +N+ ++T+NA+I+G A+  
Sbjct: 82  QVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLG 141

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A  LF ++  + + P   TF  ++ AC S   L+  +  H   +K+GF S   + +
Sbjct: 142 HVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGT 201

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G +  A   F      D   +  M+ GY  +G+ +K+ ++F  M+  G + 
Sbjct: 202 ALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKP 261

Query: 178 NEFSLTAVL-GASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  S  ++L G S    +  G+ +H   +  G +  V   +  A++ +Y+ CG    A +
Sbjct: 262 NRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV--RVATALIRMYMGCGSIEGARR 319

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD++   DVVSW+  I    +     +AFGLF  ++    Q +  T I+++++      
Sbjct: 320 VFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSAD 379

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   ++I +   + GF   + +  AL+ MY KCG + DAR +FD +  +D VSW++MI  
Sbjct: 380 LSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGA 439

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ENG   +A + F  M   ++ P+  T  ++L A  +  +L   M++++  IK+  +  
Sbjct: 440 YVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSH 499

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI    K  ++  ++ +   + +++ V  N +           EAL+L+  +  
Sbjct: 500 IPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLK 559

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR-YDQDIFVESAVIDMYCKCGTIE 530
                N  TF  VL AC+    +E+G+      L  R     + +   ++D+  + G ++
Sbjct: 560 ERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELD 619

Query: 531 DAK 533
           +A+
Sbjct: 620 EAE 622



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 86/177 (48%), Gaps = 2/177 (1%)

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R   GS   ++  T+  + + C  + D   GK +    +++    +I+  + +I ++ 
Sbjct: 49  LHRLGEGS-NHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            CG + +A++ F  +   ++  WNA++ GYAQ G   E   LF +M    ++P  IT+L 
Sbjct: 108 ICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLI 167

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           VL +C     ++  + + + +  + G +        +V +  + G ++GA+   D +
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKV-GFVSDFRIGTALVSMYVKGGSMDGARQVFDGL 223


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/753 (30%), Positives = 392/753 (52%), Gaps = 35/753 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  I  G   D I+   LI  ++K      A R   +   RD +++ A++SG A+  
Sbjct: 63  EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL L+ ++   G+ P  +  SS++ +C   +   +   VH    K GF S  ++ +
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y + G    AE  F D    D V +  ++ G+      + + E+F EM+S GL  
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +++++L A     D+++G Q+H +  K G  S     +  ++++LYV+CG    A+ 
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYI--MEGSLLDLYVKCGDVETALV 300

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+     +VV W+  + A     D  ++F LF  ++    + N++T   +L +      
Sbjct: 301 IFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGE 360

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI +   K GF   + +   LI MY K G +  AR + + L  KD VSW SMIAG
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++ +   AL  F  M +  + P+   +AS +   +  K+++Q +Q+H+ +  SG+  D
Sbjct: 421 YVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGD 480

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y +C  + E+     EI+ K+ +  N L S    +  H EAL+++  +  
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + N  TF   L A A + +++QGK IH   +K  +  +  V +A+I +Y KCG+ ED
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++   +   WN ++   +QHG   E  + F++M K G+                
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL---------------- 644

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
                   +Y   MSD +G+ P+ +HYAC++D+ GR G L+ AK  +++MPI  DA +W+
Sbjct: 645 --------SYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWR 696

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLSAC ++ NI++G LA   LLEL+P + ++YVLLSN YA  G W +  ++RK M+++ 
Sbjct: 697 TLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRG 756

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + KEPG SWI V    H F+ GD  H  +++IY
Sbjct: 757 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIY 789



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 159/384 (41%), Gaps = 44/384 (11%)

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           N +  +   ++H+  I  G   D  + + LI  Y K   +  ++RV  E+  ++ V   A
Sbjct: 54  NGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVA 113

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           + S         EAL LYR +  +         S VL +C       QG+++H    K  
Sbjct: 114 MLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQG 173

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           +  + FV +A+I +Y +CG+   A+R F  +       +N ++ G+AQ         +F 
Sbjct: 174 FCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFE 233

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREA---RTYL------------SCMSDLHGLIP 613
           +M   G+ PD +T  ++L +C   G +++     +YL              + DL+    
Sbjct: 234 EMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCG 293

Query: 614 QLEHYACIVDL---------------LGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLS 655
            +E    I +L                G++  L  +     QM    I P+   +  +L 
Sbjct: 294 DVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILR 353

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNES-TYV--LLSNLYASAGMWNDVGKLRKEMKEKFL 712
            CT  G IDLG    S  L ++   ES  YV  +L ++Y+  G      ++ + +KEK +
Sbjct: 354 TCTCTGEIDLGEQIHS--LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411

Query: 713 CKEPGYSWIH-VGGYTHHFYAGDS 735
                 SW   + GY  H Y  D+
Sbjct: 412 V-----SWTSMIAGYVQHEYCKDA 430


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/622 (33%), Positives = 352/622 (56%), Gaps = 15/622 (2%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGF 201
           V +  ++  Y WNG ++++ +++ +M   G+  N F+   VL A   +KE   G +IH  
Sbjct: 85  VLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCD 144

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC--DGV- 258
             ++   S V  +++ A+++ Y +CG   DA ++FD++ + DVV+W+  I+     +G  
Sbjct: 145 IKRLRLESNV--YVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSY 202

Query: 259 -EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            E   L   ++ ND   N  T++ +L +V     LR GK+I  FC + GF+  V +G  +
Sbjct: 203 DEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGI 261

Query: 318 ISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS---L 373
           + +YGKC  ++ AR IFD + I K+ V+W++M+  Y    F  +AL++FC +L      +
Sbjct: 262 LDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVI 321

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           + +  T+A+++   +N   L     +H + IKSGF+LD  + + L++ Y KC  +N + R
Sbjct: 322 VLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMR 381

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
             +E+D ++AV   A+ S  V      E L ++  +  S      +T + VL ACA +  
Sbjct: 382 FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAG 441

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  G   HC A+   +  D  + +A+IDMY KCG I+ A++ F ++ +  +  WN M++ 
Sbjct: 442 LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIA 501

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   E   LF+ M   G+KPD++T++ ++++C H+GLV E + + + M+   G+IP
Sbjct: 502 YGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIP 561

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           ++EHYAC+VDLL R GL +     I++MP+ PD  +W +LLSAC +Y N++LG     K+
Sbjct: 562 RMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKI 621

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            +L P++   +VLLSN+Y++ G W+D  ++R   KE+   K PG SWI + G  H F  G
Sbjct: 622 QKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGG 681

Query: 734 D-SSHSQSKEIYKELIKLYEHM 754
              SH Q  +I  +L +L   M
Sbjct: 682 GYRSHPQLTQISNKLDELLVEM 703



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 248/521 (47%), Gaps = 28/521 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA------FRFLFDT---QNRDIITYNAL 52
           I+  L+K  H       T     F K  D   A       R +FD    + ++++ +N L
Sbjct: 31  IHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLL 90

Query: 53  ISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF 109
           I   A       A+ L+ ++   G+ P+ FTF  ++KAC +L+E      +H    +L  
Sbjct: 91  IRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRL 150

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY-VWNGEFDKSKEVFV 168
            S VY+ +  ++ YAK G +  A+  F      D VA+ +M+ G+ +  G +D+   + V
Sbjct: 151 ESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLV 210

Query: 169 EMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +M++  +  N  ++  VL A   V   + G++IHGF V+ GF+  V   +   I+++Y +
Sbjct: 211 QMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVV--VGTGILDVYGK 267

Query: 226 CGQKLD-AVKMFDEI-TEPDVVSWSERIAA--ACD----GVEAFGLFKDLRFNDFQINEY 277
           C Q +D A ++FD +    + V+WS  + A   CD     +E F     L+ +   ++  
Sbjct: 268 C-QCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAV 326

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+  ++        L  G  +  +  K GF+  + +GN L+SMY KCG +N A   F+ +
Sbjct: 327 TLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEM 386

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D+VS+ ++I+GY +NG   + L MF  M    + P   T+AS+L A ++   L    
Sbjct: 387 DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGS 446

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
             H + I  GF  D  + + LI  Y KC  ++ +++V   + K+  V  N +        
Sbjct: 447 CSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHG 506

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
              EAL L+  +     + +  TF  ++ AC+    + +GK
Sbjct: 507 IGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 12/307 (3%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIK-------SGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +LE+   SKSL +   +H H++K       +     D     L+  Y  C+ L  ++ V 
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74

Query: 436 SEID--KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
            ++    KN V  N L     +   + EA++LY  + G     N  TF  VLKAC+A+ +
Sbjct: 75  DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
             +G+ IHC   + R + +++V +A++D Y KCG ++DAK  F K+ +  +  WN+M+ G
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194

Query: 554 YAQH-GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           ++ H G Y EV+ L  +M    V P+  T + VL +      +R  +  +       G +
Sbjct: 195 FSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKE-IHGFCVRRGFV 252

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
             +     I+D+ G+   ++ A+   D M I  +   W +++ A  +   +   L    +
Sbjct: 253 GDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQ 312

Query: 673 LLELQPD 679
           LL L+ D
Sbjct: 313 LLMLKDD 319



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 17/370 (4%)

Query: 317 LISMYGKCGQVNDARSIFDYLIF--KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           L+ +Y  C ++  AR +FD +    K+ V WN +I  Y+ NG + +A+D++  ML + + 
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN +T   +L+A S  K   +  ++H  I +     +  + + L+  Y KC  L+++K V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176

Query: 435 LSEIDKKNAVHINALASVL-VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
             ++ K++ V  N++ S   ++   + E   L   +       N ST   VL A A +  
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSP-NSSTIVGVLPAVAQVNS 235

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF--RKICRDSLAGWNAMM 551
           L  GK IH   ++  +  D+ V + ++D+Y KC  I+ A+R F    I ++ +  W+AM+
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVT-WSAMV 294

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITY----LAVLTSCCHAGLVREARTYLSCMSD 607
             Y       E   LF ++    +K D I      LA +   C         T L C + 
Sbjct: 295 GAYVVCDFMREALELFCQL--LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAI 352

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             G +  L     ++ +  + G++ GA    ++M +  DA  + +++S     GN + GL
Sbjct: 353 KSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDL-RDAVSFTAIISGYVQNGNSEEGL 411

Query: 668 LAGSKLLELQ 677
                 LE+Q
Sbjct: 412 ---RMFLEMQ 418



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 179/371 (48%), Gaps = 27/371 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFA--DF-RRAFRFLFDTQNRDIITYNALISGLA 57
           +I+   ++ G   D ++ T ++  + K    D+ RR F  +   +N   +T++A++    
Sbjct: 241 EIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE--VTWSAMVGAYV 298

Query: 58  RFCQSGPALKLFDRLRYQGLRPD-----AFTFSSLVKACGSLQE---NEIVHGVCLKLGF 109
                  AL+LF +L    L+ D     A T +++++ C +L +      +H   +K GF
Sbjct: 299 VCDFMREALELFCQLLM--LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGF 356

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFV 168
              + + +  +  YAK G I++  M F + +DL D V++TA++ GYV NG  ++   +F+
Sbjct: 357 VLDLMVGNTLLSMYAKCG-IINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFL 415

Query: 169 EMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           EM+  G+   + +L +VL A   +     G   H + +  GF +     + NA++++Y +
Sbjct: 416 EMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTAD--TMICNALIDMYAK 473

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           CG+   A K+FD + +  +VSW+  I A      G+EA  LF +++    + ++ T I L
Sbjct: 474 CGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICL 533

Query: 283 LSSVGGERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +S+     ++  GK    A     G +  +     ++ +  + G   +  S  + +  + 
Sbjct: 534 ISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEP 593

Query: 342 SVS-WNSMIAG 351
            V  W ++++ 
Sbjct: 594 DVRVWGALLSA 604



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 24/220 (10%)

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQ--------DIFVESAVIDMYCKCGTIEDAK 533
           +++L++C     L +GK IH   LK  +          D+  E  ++D+Y  C  ++ A+
Sbjct: 13  TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEK-LVDLYIACSELKIAR 71

Query: 534 RAFRKICR--DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
             F K+     ++  WN ++  YA +G Y E  +L+ KM  +G+ P+  T+  VL +C  
Sbjct: 72  HVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKAC-- 129

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
              ++EA        D+  L  +   Y    +VD   + G L+ AK   D+M    D   
Sbjct: 130 -SALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH-KRDVVA 187

Query: 650 WQSLLSACTIY-GNIDLGLLAGSKLLELQPD---NESTYV 685
           W S++S  +++ G+ D        L+++Q D   N ST V
Sbjct: 188 WNSMISGFSLHEGSYD---EVARLLVQMQNDVSPNSSTIV 224


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/694 (31%), Positives = 364/694 (52%), Gaps = 15/694 (2%)

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           L  +G + D++ +  L+++C     L   + VH   L+ G    VY+ +  ++ YA  G 
Sbjct: 19  LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +  A   F    +   V++  M+ GY   G   ++  +F  M+   LE ++F+  ++L A
Sbjct: 79  VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138

Query: 189 SFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
                 +  G +IH   ++ G  +     + NA++++Y +CG   DA ++FD +   D V
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTT--VGNALISMYAKCGSVRDARRVFDAMASRDEV 196

Query: 246 SWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+    A  +   G E+   +  +     + +  T +N+LS+ G    L  GKQI A  
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            +  +   V +  AL  MY KCG   DAR +F+ L ++D ++WN+MI G+ ++G   +A 
Sbjct: 257 VESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAH 316

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
             F  MLE  + P+  T  ++L A +    L +  ++H+   K G + D    + LI  Y
Sbjct: 317 GTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMY 376

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH--AEALELYRTIWGSCREVNGST 480
            K  ++ ++++V   + K++ V    L     YA C    E+   ++ +     + N  T
Sbjct: 377 SKAGSMKDARQVFDRMPKRDVVSWTTLLGR--YADCDQVVESFTTFKQMLQQGVKANKIT 434

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +  VLKAC+    L+ GK IH   +KA    D+ V +A++ MY KCG++EDA R F  + 
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
              +  WN ++ G  Q+G   E    +  M   G++P+  T++ VL++C    LV E R 
Sbjct: 495 MRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRR 554

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
             + MS  +G++P  +HYAC+VD+L R G L  A+  I  +P+ P A +W +LL+AC I+
Sbjct: 555 QFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIH 614

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
            N+++G  A    L+L+P N   YV LS +YA+AGMW DV KLRK MKE+ + KEPG SW
Sbjct: 615 CNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSW 674

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           I + G  H F A D SH +++EIY EL  L + M
Sbjct: 675 IEIAGEVHSFVARDQSHPRTQEIYAELETLKKQM 708



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 271/566 (47%), Gaps = 21/566 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++  +++ G   +  ++ TL+  +        A R LFD   N+ ++++N +ISG A  
Sbjct: 49  QVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEA-RQLFDKFSNKSVVSWNVMISGYAHR 107

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
             +  A  LF  ++ + L PD FTF S++ AC S   L     +H   ++ G ++   + 
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  YAK G +  A   F      D V++T +   Y  +G  ++S + +  M    + 
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR 227

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  +   VL   G+   +++G+QIH   V+  + S V   ++ A+  +Y++CG   DA 
Sbjct: 228 PSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV--RVSTALTKMYMKCGAFKDAR 285

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ ++  DV++W+  I    D     EA G F  +       +  T   +LS+     
Sbjct: 286 EVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPG 345

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK+I A   K G +  V  GNALI+MY K G + DAR +FD +  +D VSW +++ 
Sbjct: 346 GLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLG 405

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y++     ++   F  ML+  +  N  T   +L+A SN  +LK   ++H+ ++K+G L 
Sbjct: 406 RYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLA 465

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D ++ + L++ Y KC ++ ++ RV   +  ++ V  N L   L       EAL+ Y  + 
Sbjct: 466 DLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMK 525

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKC 526
                 N +TF  VL AC     +E+G+       K   D  I       + ++D+  + 
Sbjct: 526 SEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK---DYGIVPTEKHYACMVDILARA 582

Query: 527 GTIEDAKRAFRKI-CRDSLAGWNAMM 551
           G + +A+     I  + S A W A++
Sbjct: 583 GHLREAEDVILTIPLKPSAAMWGALL 608


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/700 (31%), Positives = 376/700 (53%), Gaps = 18/700 (2%)

Query: 60  CQSGPALKLFDRLRYQGLRP-------DAFTFSSLVKAC---GSLQENEIVHGVCLKLGF 109
           C+S  AL +  +  +   R        + + + SL+++C   G     + +H   +K G 
Sbjct: 16  CKSNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGN 75

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
              ++  +  +  Y K   +  A   F +  D + V++  ++ GY     F ++  +F  
Sbjct: 76  CLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSR 135

Query: 170 MRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           ++  G ELN F  + VL    ++   K G  +H    K+GF S     +  A+++ Y  C
Sbjct: 136 LQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDA--FVGTALIDCYSVC 193

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLL 283
           G    A ++FD I   D+VSW+  +A   +     E+  LF  +R   F+ N +T  ++L
Sbjct: 194 GYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVL 253

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            +  G  +   GK +    +K  ++E + +G  LI +Y K G V+DA  +F+ +   D +
Sbjct: 254 KACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVI 313

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
            W+ MIA Y+++    +A++MFC M    ++PN +T+AS+L+A ++   L+   Q+H H+
Sbjct: 314 PWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHV 373

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +K G  ++  + + L+  Y KC  +  S ++ SE      V  N +    V A    +AL
Sbjct: 374 VKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKAL 433

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L++ +     +    T+S VL+ACA +  LE G  IH L++K  YD++  V +A+IDMY
Sbjct: 434 ILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMY 493

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG I+DA+  F  +       WNAM+ GY+ HG Y E    F  M +   KPD++T++
Sbjct: 494 AKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFV 553

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            +L++C +AGL+   + Y   M + + + P  EHY C+V LLGR G L+ A   + ++P 
Sbjct: 554 GILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPF 613

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
            P   +W++LLSAC I+ +++LG ++  ++LE++P++E+T+VLLSN+YA+A  W +V  +
Sbjct: 614 EPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASI 673

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           R  MK K + KEPG SWI   G  H+F  GD+SH  +K I
Sbjct: 674 RTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLI 713



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 283/564 (50%), Gaps = 15/564 (2%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           +IK G+ LD   +  L++ + K+     A +   +  +R+ +++  LI G ++  +   A
Sbjct: 70  IIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEA 129

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIEN 122
           + LF RL+ +G   + F FS+++K   S +  ++   VH    KLGF S  ++ +  I+ 
Sbjct: 130 IGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDC 189

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y+  G    A   F      D V++T MV  YV N  F++S ++F  MR +G + N F+ 
Sbjct: 190 YSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTF 249

Query: 183 TAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            +VL A   ++    G+ +HG   K  +L  +   +   +++LY++ G   DA+++F+E+
Sbjct: 250 ASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL--FVGVELIDLYIKSGDVDDALQVFEEM 307

Query: 240 TEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
            + DV+ WS    R A +    EA  +F  +R      N++T+ +LL +      L+ G 
Sbjct: 308 PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           QI     KVG    V + NAL+ MY KCG++ ++  +F        VSWN++I GY + G
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +AL +F  MLE  +     T +S+L A +   +L+   Q+HS  +K+ +  +  + +
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN 487

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            LI  Y KC  + +++ V   + + + V  NA+ S       + EAL+ + ++  +  + 
Sbjct: 488 ALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKP 547

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
           +  TF  +L AC+    L++G+A +  ++   YD +   E  + ++ +  + G ++ A +
Sbjct: 548 DKVTFVGILSACSNAGLLDRGQA-YFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAK 606

Query: 535 AFRKIC-RDSLAGWNAMMMGYAQH 557
              +I    S+  W A++     H
Sbjct: 607 LVHEIPFEPSVMVWRALLSACVIH 630



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K G  ++  +S  L+  + K      + +   ++ N   +++N +I G  +  
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  +    ++    T+SS+++AC    +L+    +H + +K  +     + +
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN 487

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  A + F    + D V++ AM+ GY  +G + ++ + F  M     + 
Sbjct: 488 ALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKP 547

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   +L A  +   +  G+      V+   +     H    ++ L  R G    A K
Sbjct: 548 DKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHY-TCMVWLLGRSGHLDKAAK 606

Query: 235 MFDEIT-EPDVVSWSERIAA 253
           +  EI  EP V+ W   ++A
Sbjct: 607 LVHEIPFEPSVMVWRALLSA 626


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 222/680 (32%), Positives = 367/680 (53%), Gaps = 16/680 (2%)

Query: 87  LVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           L++AC    SL E + +H   LK   ++   ++      Y    ++V A   F +  +  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHG 200
            + +  ++  Y WNG FD + +++  M  LG+  N+++   VL A      +++G +IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA-----C 255
                G  S V   +  A+++ Y +CG  ++A ++F  ++  DVV+W+  IA       C
Sbjct: 134 HAKMFGLESDV--FVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           D  +A  L   ++      N  T++ +L +VG  + L  GK +  +C +  F   V +G 
Sbjct: 192 D--DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLI 374
            L+ MY KC  +  AR IFD +  ++ VSW++MI GY  +    +AL++F  M L+ ++ 
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P   T+ S+L A +    L +  ++H +IIK G +LD  + + L++ Y KC  ++++ R 
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              ++ K++V  +A+ S  V     A AL ++R +  S  + + +T   VL AC+ +  L
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + G   H   +   +  D  + +A+IDMY KCG I  A+  F ++ R  +  WNAM++GY
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HG   E   LF+ +   G+KPD+IT++ +L+SC H+GLV E R +   MS    ++P+
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EH  C+VD+LGR GL++ A   I  MP  PD  IW +LLSAC I+ NI+LG     K+ 
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            L P++   +VLLSN+Y++AG W+D   +R   K+  L K PG SWI + G  H F  GD
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGD 669

Query: 735 SSHSQSKEIYKELIKLYEHM 754
            SH Q  +I ++L +L   M
Sbjct: 670 QSHLQLSQINRKLEELLVEM 689



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 250/512 (48%), Gaps = 20/512 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+   +KN  + D  +   L   +        A R   +  N  +I +N +I   A   
Sbjct: 29  KIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYA--- 85

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVY 114
            +GP   A+ L+  + + G+RP+ +T+  ++KAC  L   ++   +H      G  S V+
Sbjct: 86  WNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF 145

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ YAK G +V A+  F      D VA+ AM+ G    G  D + ++ ++M+  G
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  ++  VL   G +  +  G+ +HG+ V+  F +GV   +   ++++Y +C   L 
Sbjct: 206 ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV--VGTGLLDMYAKCQCLLY 263

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFND-FQINEYTMINLLSSVG 287
           A K+FD +   + VSWS  I          EA  LF  +   D       T+ ++L +  
Sbjct: 264 ARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACA 323

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  G+++  +  K+G +  + +GN L+SMY KCG ++DA   FD +  KDSVS+++
Sbjct: 324 KLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSA 383

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +++G  +NG    AL +F  M++ S I P+  TM  +L A S+  +L+     H ++I  
Sbjct: 384 IVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  D  + + LI  Y KC  ++ ++ V + +D+ + V  NA+           EAL L+
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             +     + +  TF  +L +C+    + +G+
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 222/457 (48%), Gaps = 39/457 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + T L+  + K      A R      +RD++ +NA+I+G + +     A++L  +++
Sbjct: 143 DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQ 202

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+ P++ T   ++   G   +L   + +HG C++  F + V + +G ++ YAK   ++
Sbjct: 203 EEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL 262

Query: 131 SAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGA 188
            A   F D + + N V+++AM+ GYV +    ++ E+F +M     ++    +L +VL A
Sbjct: 263 YARKIF-DVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRA 321

Query: 189 S---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
                D+  G ++H + +K+G +  +   L N ++++Y +CG   DA++ FD +   D V
Sbjct: 322 CAKLTDLSRGRKLHCYIIKLGXVLDIL--LGNTLLSMYAKCGVIDDAIRFFDXMNPKDSV 379

Query: 246 SWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           S+S  I + C    +   A  +F+ ++ +    +  TM+ +L +      L+ G     +
Sbjct: 380 SFSA-IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 438

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
               GF     I NALI MY KCG+++ AR +F+ +   D VSWN+MI GY  +G   +A
Sbjct: 439 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 498

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS----- 416
           L +F  +L   L P+  T   +L + S           HS ++  G L  D+M       
Sbjct: 499 LGLFHDLLALGLKPDDITFICLLSSCS-----------HSGLVMEGRLWFDAMSRDFSIV 547

Query: 417 -------CLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                  C++   G+   ++E+   +  +  +  V I
Sbjct: 548 PRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/761 (29%), Positives = 404/761 (53%), Gaps = 13/761 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q +   IK G   D  + T+ +  +  +     A +   +  +R+++++ +L+   +   
Sbjct: 80  QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNG 139

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVH---GVCLKLGFSSRVYLVS 117
                +  + R+R++G+  +    + ++ +CG L +  + H   G  LK G  ++V   +
Sbjct: 140 SKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAAN 199

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +   G+I  A   F +  + D +++ +++     N   ++S   F  MR +  E+
Sbjct: 200 SLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEI 259

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +L+ +L   G+   +K G+ +HG  VK G  S +C  L N ++++Y   G+  DA  
Sbjct: 260 NYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNIC--LCNTLLSVYSDAGRSKDAEL 317

Query: 235 MFDEITEPDVVSWSERIAAAC-DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D++SW+  +A    DG  + A  +F ++ +   +IN  T  + L++      
Sbjct: 318 IFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEF 377

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              GK +  F   +G  + + IGN LI+ YGKC ++ +A+ +F  +   D V+WN++I G
Sbjct: 378 FTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGG 437

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGY-TMASILEA-VSNSKSLKQAMQVHSHIIKSGFL 409
           ++ N   N+A+  F  M E S     Y T+ +IL + +++   +K  + +H+H + +GF 
Sbjct: 438 FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFD 497

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           LD  + S LIT Y KC  L+ S  +  ++  K +   NA+ +         EAL+L   +
Sbjct: 498 LDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRM 557

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +  E +   FS  L   A +  LE+G+ +H   +K  ++ D F+ +A +DMY KCG +
Sbjct: 558 RSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGEL 617

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           +DA R   +    S   WN ++   A+HG +H+    F+ M K GVKP+ ++++ +L++C
Sbjct: 618 DDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSAC 677

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H GLV E   Y + M+ ++G+ P +EH  C++DLLGR G L  A+  I +MPIPP+  +
Sbjct: 678 SHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLV 737

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W+SLL++C IY N+DLG  A   LLEL P ++S YVL SN++A+ G W DV  +R +M  
Sbjct: 738 WRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGA 797

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             + K+P +SW+   G    F  GD +H Q ++I  +L+ L
Sbjct: 798 HKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGL 838



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 188/687 (27%), Positives = 321/687 (46%), Gaps = 36/687 (5%)

Query: 25  FTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFT 83
           ++KF     A + +FD  + R+  ++N ++SG  R      A+  F  +   G++P  F 
Sbjct: 2   YSKFGRINYA-QLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 84  FSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
            +SLV AC       +E    HG  +K G    V++ + F+  YA  G + +A+  F + 
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGE 196
            D + V++T+++  Y  NG   +    +  MR  G+  NE ++  V+   G   D+  G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           Q+ G  +K G  + V     N+++ ++  CG   +A  +F+E+ E D +SW+  I+A   
Sbjct: 181 QLLGHALKFGLETKVS--AANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238

Query: 257 GV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
                E+F  F  +R    +IN  T+  LLS  G    L+ GK +     K G    + +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N L+S+Y   G+  DA  IF  +  +D +SWNSM+A Y ++G    AL +F  ML    
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNES 431
             N  T  S L A  + +       +H  ++  G  L D +I  + LIT YGKC+ + E+
Sbjct: 359 EINYVTFTSALAACLDPEFFTNGKILHGFVVVLG--LQDELIIGNTLITFYGKCHKMAEA 416

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW-GSCREVNGSTFSIVLKACAA 490
           K+V   + K + V  NAL       +   EA+  ++ +  GS   V+  T   +L +C  
Sbjct: 417 KKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLT 476

Query: 491 MTDL-EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
             DL + G  IH   +   +D D  V+S++I MY KCG +  +   F ++   + + WNA
Sbjct: 477 HEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNA 536

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++   A++G   E   L  +M   G++ D+  +   L+      ++ E +        LH
Sbjct: 537 IIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ-------QLH 589

Query: 610 G----LIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           G    L  +L+H+     +D+ G+ G L+ A   + Q P       W +L+S    +G  
Sbjct: 590 GSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARHGQF 648

Query: 664 DLGLLAGSKLLEL--QPDNESTYVLLS 688
                    +L+L  +P++ S   LLS
Sbjct: 649 HKAKETFHDMLKLGVKPNHVSFVCLLS 675



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/477 (22%), Positives = 220/477 (46%), Gaps = 9/477 (1%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYT 278
           +Y + G+   A  +FD ++E +  SW+  ++        VEA   F+D+     + + + 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 279 MINLLSSVGGERIL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           + +L+++     I+ + G Q   F  K G +  V +G + +  Y   G V++A+ +F+ +
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             ++ VSW S++  YS+NG   + ++ +  M    +  N   +A ++ +      +    
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q+  H +K G     S  + LI  +G C  +NE+  + +E+++++ +  N++ S     +
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
            H E+   +  +     E+N +T SI+L  C ++  L+ GK +H LA+K   + +I + +
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            ++ +Y   G  +DA+  FR++    L  WN+M+  Y Q G       +F +M     + 
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           + +T+ + L +C         +  L     + GL  +L     ++   G+   +  AK  
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKI-LHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLG-LLAGSKLLELQPDNESTYVLLSNLYAS 693
             +MP   D   W +L+       N +L   +A  KL+     +   Y+ + N+  S
Sbjct: 420 FQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/567 (35%), Positives = 329/567 (58%), Gaps = 8/567 (1%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G Q+H   V +GF  G    +NN ++++Y +C +   A  +FD + E +VVSW+  +  
Sbjct: 22  QGLQVHAAAVNMGF--GFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCG 79

Query: 254 ACDGVEAFG---LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                 A G   L  ++ ++  + NE+T    L + G   ++  G QI   C K GF  V
Sbjct: 80  YLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWV 139

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             +GNA I MY KCG++  A  +F+ + F++ VSWN+MIAG++  G   ++L +F  M  
Sbjct: 140 SVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQG 199

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD--DSMISCLITTYGKCNAL 428
              +P+ +T  S L+A     +++   Q+H+ +I  GF +   + + S ++  Y KC  L
Sbjct: 200 QGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYL 259

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E+++V   I++KN +  +AL           EA++L+R +  S   V+G   SI++   
Sbjct: 260 FEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVF 319

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +  +EQGK +HC  LK     DI V +++IDMY KCG  E+A+R F ++   ++  W 
Sbjct: 320 ADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWT 379

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            M+ GY +HG   +  +LFN+M   G++ DE+ YLA+L++C H+GL+RE++ Y S + + 
Sbjct: 380 VMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNN 439

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           H + P +EHYAC+VD+LGR G L+ AK  I+ M + P+  IWQ+LLSAC ++GN+++G  
Sbjct: 440 HQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGRE 499

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
            G  L  +  DN   YV++SN+YA AG W +  ++RK +K K L KE G SW+ +    H
Sbjct: 500 VGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIH 559

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHMV 755
            FY GD +H  +++I+ E++K  E  V
Sbjct: 560 FFYGGDDTHPLTEKIH-EMLKEMERRV 585



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 232/451 (51%), Gaps = 10/451 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +  G   D I++  LI  + K +    A         R+++++ AL+ G  +  
Sbjct: 25  QVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEG 84

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ--ENEI-VHGVCLKLGFSSRVYLVS 117
            +  +L L   + Y G++P+ FTFS+ +KACG+L   EN + +HG+C+K GF     + +
Sbjct: 85  NAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGN 144

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G I  AE  F      + V++ AM+ G+   G   KS  +F  M+  G   
Sbjct: 145 ATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVP 204

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+ T+ L   GA   ++ G QIH   +  GF   + N + +AI++LY +CG   +A K
Sbjct: 205 DEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQK 264

Query: 235 MFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD I + +++SWS  I   A +G  +EA  LF+ LR +   ++ + +  ++       +
Sbjct: 265 VFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLAL 324

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ+  +  KV     +S+ N++I MY KCG   +A  +F  +  ++ VSW  MI G
Sbjct: 325 VEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITG 384

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++G   +A+ +F  M    +  +     ++L A S+S  ++++ +  S +  +  +  
Sbjct: 385 YGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKP 444

Query: 412 D-SMISCLITTYGKCNALNESKRVLSEIDKK 441
           +    +C++   G+   L E+K ++  +  K
Sbjct: 445 NIEHYACMVDILGRAGQLKEAKNLIENMKLK 475



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 219/472 (46%), Gaps = 43/472 (9%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           +  LL +     +   G Q+ A    +GF   + + N LI MYGKC +V+ A S+FD ++
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            ++ VSW +++ GY + G    +L + C M    + PN +T ++ L+A      ++  MQ
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H   +KSGF     + +  I  Y KC  +  +++V +++  +N V  NA+ +   +   
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI--FVE 516
             ++L L++ + G     +  TF+  LKAC A+  +  G  IH   +   +   I   + 
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           SA++D+Y KCG + +A++ F +I + +L  W+A++ G+AQ G   E  +LF ++ +    
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306

Query: 577 PDEITYLAVLTSCCHAGLVREART-----------------------YLSC--MSDLHGL 611
            D      ++       LV + +                        YL C    +   L
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERL 366

Query: 612 IPQLE-----HYACIVDLLGRVGLLEGA-----KMTIDQMPIPPDAHIWQSLLSACTIYG 661
             +++      +  ++   G+ GL E A     +M +D + +   A++  +LLSAC+  G
Sbjct: 367 FSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYL--ALLSACSHSG 424

Query: 662 NIDLGLLAGSKLL---ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            I       S+L    +++P+ E  Y  + ++   AG   +   L + MK K
Sbjct: 425 LIRESQEYFSRLCNNHQMKPNIEH-YACMVDILGRAGQLKEAKNLIENMKLK 475


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 245/726 (33%), Positives = 385/726 (53%), Gaps = 25/726 (3%)

Query: 41   TQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACG---SL 94
            TQN+     NA I+   +FC+ G    A++L  + +   L  +++   S+++ C    SL
Sbjct: 336  TQNQ-----NAKIN---KFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSL 385

Query: 95   QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
            ++ + VH V +  G S    L +  +  Y   G++V     F   ++     +  ++  Y
Sbjct: 386  EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445

Query: 155  VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGV 211
               G F +S  +F +M+ LG+  N ++ T VL    A   VKE +++HG+ +K+GF  G 
Sbjct: 446  AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGF--GS 503

Query: 212  CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI-AAACDGVEAFGL--FKDLR 268
               + N+++  Y + G    A  +FDE++EPDVVSW+  I     +G    GL  F  + 
Sbjct: 504  NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563

Query: 269  FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
                +++  T++++L +      L  G+ +  F  K  F E V   N L+ MY KCG +N
Sbjct: 564  ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 623

Query: 329  DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
             A  +F  +     VSW S IA Y   G ++ A+ +F  M    + P+ YT+ SI+ A +
Sbjct: 624  GATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 683

Query: 389  NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
             S SL +   VHS++IK+G   +  + + LI  Y KC ++ E++ V S+I  K+ V  N 
Sbjct: 684  CSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNT 743

Query: 449  LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            +       S   EALEL+  +    +  +  T + VL ACA +  L++G+ IH   L+  
Sbjct: 744  MIGGYSQNSLPNEALELFLDMQKQFKP-DDITMACVLPACAGLAALDKGREIHGHILRRG 802

Query: 509  YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
            Y  D+ V  A++DMY KCG +  A+  F  I +  L  W  M+ GY  HG  +E  + FN
Sbjct: 803  YFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 862

Query: 569  KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
            +M   G++PDE ++  +L +C H+GL+ E   + + M +  G+ P+LEHYAC+VDLL R+
Sbjct: 863  EMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM 922

Query: 629  GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
            G L  A   I+ MPI PD  IW  LLS C I+ ++ L       + EL+PDN   YV+L+
Sbjct: 923  GNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLA 982

Query: 689  NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
            N+YA A  W +V KLRK M+++   + PG SWI VGG  + F AG+S H Q+K I   L 
Sbjct: 983  NVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLR 1042

Query: 749  KLYEHM 754
            KL   M
Sbjct: 1043 KLTMQM 1048



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 206/407 (50%), Gaps = 12/407 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  ++K G   +  +  +LI+ + KF     A     +    D++++N++I+G     
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
            SG  L++F ++   G+  D  T  S++ A    G+L     +HG  +K  FS  V   +
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G +  A   F    D   V++T+ +  YV  G +  +  +F EM+S G+  
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++T+++ A   S  + +G  +H + +K G  S +   + NA++N+Y +CG   +A  
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL--PVTNALINMYAKCGSVEEARL 728

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F +I   D+VSW+  I          EA  LF D++   F+ ++ TM  +L +  G   
Sbjct: 729 VFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAA 787

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G++I     + G+   + +  AL+ MY KCG +  A+ +FD +  KD +SW  MIAG
Sbjct: 788 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           Y  +GF N+A+  F  M    + P+  + + IL A S+S  L +  +
Sbjct: 848 YGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWK 894



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 188/402 (46%), Gaps = 25/402 (6%)

Query: 16   ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
            + S TL+  ++K  +   A        +  I+++ + I+   R      A+ LFD ++ +
Sbjct: 607  VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSK 666

Query: 76   GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            G+RPD +T +S+V AC    SL +   VH   +K G  S + + +  I  YAK G +  A
Sbjct: 667  GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 726

Query: 133  EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
             + F      D V++  M+ GY  N   +++ E+F++M+    + ++ ++  VL A    
Sbjct: 727  RLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGL 785

Query: 192  --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
              + +G +IHG  ++ G+ S +  H+  A++++Y +CG  + A  +FD I + D++SW+ 
Sbjct: 786  AALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 843

Query: 250  RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFCYKV 305
             IA       G EA   F ++R    + +E +   +L++     +L  G K   +   + 
Sbjct: 844  MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNEC 903

Query: 306  GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENGFFNQALDM 364
            G    +     ++ +  + G ++ A    + +  K D+  W  +++G   +     A  +
Sbjct: 904  GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKV 963

Query: 365  FCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQAMQ 398
              H+ E        + ++ N Y  A   E V   K L++ MQ
Sbjct: 964  AEHIFELEPDNTRYYVVLANVYAEAEKWEEV---KKLRKRMQ 1002


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 239/748 (31%), Positives = 390/748 (52%), Gaps = 14/748 (1%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D  L+  L+  ++     R A R LFD   +R+++++ ++IS   +  +   A+ LF   
Sbjct: 52  DLFLTNLLLRGYSNLGRLRDA-RHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAF 110

Query: 73  RYQGLR-PDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +      P+ F  +S+++AC    ++   E VHG+ +KL   + VY+ +  I  YAK G 
Sbjct: 111 QKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGC 170

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +  A + F        V +  ++ GY   G    + E+F  M   G+  + F L + + A
Sbjct: 171 MDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSA 230

Query: 189 SFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
              +   + G QIHG+  +    +     + N +++LY +C +   A K+FD +   ++V
Sbjct: 231 CSALGFLEGGRQIHGYAYRSA--TETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLV 288

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+  I+         EA  +F ++    +Q + +   ++L+S G    +  G+QI A  
Sbjct: 289 SWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHV 348

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K        + NALI MY KC  + +AR++FD L   D++S+N+MI GYS+N    +A+
Sbjct: 349 IKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAV 408

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           ++F  M  FSL P+  T  S+L   S+  +++ + Q+H  IIKSG  LD    S LI  Y
Sbjct: 409 NIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVY 468

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC+ +N++K V + +  K+ V  N++           EA++L+  +  S    N  TF 
Sbjct: 469 SKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFV 528

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            ++   + +  +  G+  H   +KA  D D  V +A+IDMY KCG I++ +  F   C +
Sbjct: 529 ALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE 588

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +  WN+M+  YAQHG   E   +F  M +  V+P+ +T++ VL++C HAG V E   + 
Sbjct: 589 DVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHF 648

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + M   + + P +EHYA +V+L GR G L  AK  I++MPI P A +W+SLLSAC ++GN
Sbjct: 649 NSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGN 708

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            ++G  A    L   P +   YVLLSN+YAS G+W DV  LR++M      KE G SWI 
Sbjct: 709 AEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIE 768

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           V    H F      H +++ IY  L +L
Sbjct: 769 VTKEVHTFIVRGREHPEAELIYSVLDEL 796



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 175/668 (26%), Positives = 314/668 (47%), Gaps = 58/668 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ + +K     +  + T LI+ + K      A         R  +T+N +I+G A+  
Sbjct: 141 QVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIG 200

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
             G AL+LFDR+  +G+RPD F  +S V AC   G L+    +HG   +    +   +++
Sbjct: 201 CGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVIN 260

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I+ Y K   + +A   F DC++  N V++T M+ GY+ N    ++  +F  M   G +
Sbjct: 261 VLIDLYCKCSRLSAARKLF-DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQ 319

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+ T++L   G+   + +G QIH   +K    +    ++ NA++++Y +C    +A 
Sbjct: 320 PDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEAD--EYVKNALIDMYAKCEHLTEAR 377

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD + E D +S++  I       D  EA  +F+ +RF   + +  T ++LL     + 
Sbjct: 378 AVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQL 437

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +   KQI     K G    +   +ALI +Y KC  VNDA+++F+ L +KD V WNSMI 
Sbjct: 438 AIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIF 497

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+++N    +A+ +F  +L   + PN +T  +++   S   S+    Q H+ IIK+G   
Sbjct: 498 GHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDN 557

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + + LI  Y KC  + E + +      ++ +  N++ +         EAL+++R + 
Sbjct: 558 DPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMG 617

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGT 528
            +  E N  TF  VL ACA    + +G   H  ++K+ YD +  +E  ++V++++ + G 
Sbjct: 618 EAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGK 676

Query: 529 IEDAKRAFRKI-CRDSLAGWNAMMMG---------------------------------- 553
           +  AK    ++  + + A W +++                                    
Sbjct: 677 LHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNI 736

Query: 554 YAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVR-----EARTYLSCMSD 607
           YA  G + +V NL  +M   G VK    +++ V T   H  +VR     EA    S + +
Sbjct: 737 YASKGLWADVHNLRQQMDSSGTVKETGCSWIEV-TKEVHTFIVRGREHPEAELIYSVLDE 795

Query: 608 LHGLIPQL 615
           L  LI  L
Sbjct: 796 LTSLIKNL 803



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 155/315 (49%), Gaps = 1/315 (0%)

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
            GG+R+ R    I A     G ++ + + N L+  Y   G++ DAR +FD +  ++ VSW
Sbjct: 28  TGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSW 87

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            S+I+ Y+++G  + A+ +F    + S  +PN + +AS+L A + SK++    QVH   +
Sbjct: 88  GSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAV 147

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K     +  + + LI  Y K   ++E+  V   +  +  V  N + +      C   ALE
Sbjct: 148 KLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALE 207

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +       +    +  + AC+A+  LE G+ IH  A ++  + D  V + +ID+YC
Sbjct: 208 LFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYC 267

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KC  +  A++ F  +   +L  W  M+ GY Q+    E   +F  M++ G +PD     +
Sbjct: 268 KCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTS 327

Query: 585 VLTSCCHAGLVREAR 599
           +L SC     + + R
Sbjct: 328 ILNSCGSLAAIWQGR 342


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 244/753 (32%), Positives = 384/753 (50%), Gaps = 11/753 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I  G       S+ ++  +     FR A    F+ + R  + +N +I GL    
Sbjct: 32  QVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLG 91

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
               AL  + ++    + PD +TF  ++KACG L       +VH     LGF   ++  S
Sbjct: 92  WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGS 151

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YA +G I  A   F +    D + +  M+ GYV +G+FD +   F EMR+    +
Sbjct: 152 ALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV 211

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  + T +L       +   G Q+HG  +  GF       + N ++ +Y +CG  L A K
Sbjct: 212 NSVTYTCILSICATRGNFCAGTQLHGLVIGSGF--EFDPQVANTLVAMYSKCGNLLYARK 269

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + + D V+W+  IA         EA  LF  +     + +  T  + L S+     
Sbjct: 270 LFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 329

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR  K++ ++  +      V + +ALI +Y K G V  AR IF   I  D     +MI+G
Sbjct: 330 LRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISG 389

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    A++ F  +++  ++ N  TMAS+L A +   +LK   ++H HI+K      
Sbjct: 390 YVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENI 449

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            ++ S +   Y KC  L+ +      +  +++V  N++ S          A++L+R +  
Sbjct: 450 VNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGM 509

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  + S  L A A +  L  GK +H   ++  +  D FV S +IDMY KCG +  
Sbjct: 510 SGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLAL 569

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A   F  +   +   WN+++  Y  HGC  E  +L+++M + G+ PD +T+L ++++C H
Sbjct: 570 AWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGH 629

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV E   Y  CM+  +G+  ++EHYAC+VDL GR G +  A  TI  MP  PDA +W 
Sbjct: 630 AGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWG 689

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC ++GN++L  LA   LLEL P N   YVLLSN++A AG W  V K+R  MKEK 
Sbjct: 690 TLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKG 749

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + K PGYSWI V G TH F A D +H +S EIY
Sbjct: 750 VQKIPGYSWIDVNGGTHMFSAADGNHPESVEIY 782



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 184/385 (47%), Gaps = 3/385 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +L  +     +++  +Q+       G  +V +  + ++ +Y  CG+  DA ++F  L  +
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
            ++ WN MI G    G+F+ AL  +  ML  ++ P+ YT   +++A     ++   M VH
Sbjct: 76  YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
                 GF +D    S LI  Y     + +++RV  E+  ++ +  N +    V +    
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            A+  +  +  S   VN  T++ +L  CA   +   G  +H L + + ++ D  V + ++
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLV 255

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY KCG +  A++ F  + +     WN ++ GY Q+G   E + LFN M   GVKPD +
Sbjct: 256 AMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 315

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+ + L S   +G +R  +   S +   H +   +   + ++D+  + G +E A+  I Q
Sbjct: 316 TFASFLPSILESGSLRHCKEVHSYIVR-HRVPFDVYLKSALIDVYFKGGDVEMAR-KIFQ 373

Query: 641 MPIPPDAHIWQSLLSACTIYG-NID 664
             I  D  +  +++S   ++G NID
Sbjct: 374 QNILVDVAVCTAMISGYVLHGLNID 398


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/654 (35%), Positives = 356/654 (54%), Gaps = 16/654 (2%)

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
           +GF+   ++ S  I+ YA++G I  A   F    + D V +  M+ G+V  GE + + +V
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 167 FVEMRSLGLELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLN----NAI 219
           F +MR+   + N  +  +VL   AS  + E G Q+HG  +  GF      H +    NA+
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGF------HFDPLVANAL 114

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINE 276
           + +Y + GQ  DA+K+F+ + + +VV+W+  IA         EA  LF ++       + 
Sbjct: 115 VAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDS 174

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            T  + L SV     L+ GK+I  +  + G    V + +ALI +Y KC  V  A  IF  
Sbjct: 175 ITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ 234

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
               D V   ++I+GY  NG  N AL++F  +LE  + PN  T+AS+L A +   +L   
Sbjct: 235 STNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLG 294

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            ++H++I+K G      + S ++  Y KC  L+ + ++   + +K+AV  NA+ +     
Sbjct: 295 KELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQN 354

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EA++L+R +       +  + S  L ACA +  L  GKAIH   +K  +D ++F E
Sbjct: 355 GKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAE 414

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           SA+IDMY KCG +  A+  F  +   +   WN+++  Y  HG       LF+KM + G++
Sbjct: 415 SALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQ 474

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           PD +T+L +L++C HAG V +   Y  CM++ +G+  ++EHYACIVDL GR G L  A  
Sbjct: 475 PDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFE 534

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
           TI  MP  PD  +W +LL AC ++GN++L  +A   LL+L P+N   YVLLSN++A AG 
Sbjct: 535 TIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQ 594

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           W  V K+R  MK++ + K PGYSWI V   TH F A D SH +S +IY  L  L
Sbjct: 595 WGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNL 648



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 278/562 (49%), Gaps = 17/562 (3%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G ++D  + ++LI  + +      A R      N+D + +N +++G  +  +   A+K+F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKS 126
           + +R    +P++ TF+S++  C S   +E    +HG+ +  GF     + +  +  Y+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G++  A   F    D + V +  M+ G+V NG  D++  +F EM S G+  +  +  + L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 187 GA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            +   S  +K+G++IHG+ ++ G    V   L +A++++Y +C     A K+F + T  D
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDV--FLKSALIDIYFKCRDVGMACKIFKQSTNVD 239

Query: 244 VVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           +V  +  I+    +G+  +A  +F+ L       N  T+ ++L +  G   L  GK++ A
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHA 299

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              K G  E   +G+A++ MY KCG+++ A  IF  +  KD+V WN++I   S+NG   +
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQE 359

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           A+D+F  M    L  +  ++++ L A +N  +L     +HS +IK  F  +    S LI 
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALID 419

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS-CHAE-ALELYRTIWGSCREVNG 478
            YGKC  L+ ++ V   + +KN V  N++  +  Y S  H E +L L+  +     + + 
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSI--IAAYGSHGHLEVSLALFHKMLEDGIQPDH 477

Query: 479 STFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            TF  +L AC     +++G +   C+  +      +   + ++D++ + G + +A    +
Sbjct: 478 VTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIK 537

Query: 538 KICRDSLAG-WNAMMMGYAQHG 558
            +      G W  ++     HG
Sbjct: 538 NMPFSPDDGVWGTLLGACRVHG 559



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 223/444 (50%), Gaps = 18/444 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+I  G H DP+++  L++ ++KF     A +      + +++T+N +I+G   F 
Sbjct: 94  QLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAG---FV 150

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVY 114
           Q+G    A  LF  +   G+ PD+ TF+S    V    SL++ + +HG  L+ G +  V+
Sbjct: 151 QNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVF 210

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L S  I+ Y K  ++  A   F+   ++D V  TA++ GYV NG  + + E+F  +    
Sbjct: 211 LKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEK 270

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  +L +VL A   +     G+++H   +K G       H+ +AIM++Y +CG+   
Sbjct: 271 MSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDER--RHVGSAIMDMYAKCGRLDL 328

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F  + E D V W+  I          EA  LF+ +       +  ++   LS+   
Sbjct: 329 AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACAN 388

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK I +F  K  F   V   +ALI MYGKCG ++ AR +FD +  K+ VSWNS+
Sbjct: 389 LPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSI 448

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
           IA Y  +G    +L +F  MLE  + P+  T  +IL A  ++  + + +Q    + +  G
Sbjct: 449 IAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYG 508

Query: 408 FLLDDSMISCLITTYGKCNALNES 431
                   +C++  +G+   LNE+
Sbjct: 509 IPARMEHYACIVDLFGRAGRLNEA 532


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 245/763 (32%), Positives = 392/763 (51%), Gaps = 21/763 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           I+S +IK G   D  LS  L+S + K      A R LFD    RD+ ++  L+S   +  
Sbjct: 37  IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEA-RQLFDEMPCRDVASWTMLMSAYGKIG 95

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL+LFD +   G  P+ FT S+ +++C +L+E         +  K GF S   L S
Sbjct: 96  NHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGS 155

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G    A   F    + D V++T MV  +V  G + ++ +++  M   G+  
Sbjct: 156 ALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAP 215

Query: 178 NEFSLTAVLGAS--FDVKEGEQIHG----FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           NEF+   +L AS    +  G+ +H     + +++  +      L  A++++Y +C    D
Sbjct: 216 NEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLV------LKTALVDMYCKCQSIED 269

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           AVK+     E DV  W+  I+     +   EA   F ++  +    N +T   +L++   
Sbjct: 270 AVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSS 329

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ-VNDARSIFDYLIFKDSVSWNS 347
              L  GKQI +     G    VS+GN+L+ MY KC   + DA   F  +   + +SW S
Sbjct: 330 ILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTS 389

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +IAG+SE+G   +++ +F  M    + PN +T+++IL A    KSL Q  ++H +IIK+ 
Sbjct: 390 LIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNN 449

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              D  + + L+  Y     ++++  V S +  ++ +   +LA+ +     H  AL +  
Sbjct: 450 ADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIIT 509

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +      ++G + +  L A A +  +E GK +HC ++K+     I V + ++D+Y KCG
Sbjct: 510 HMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCG 569

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            I DA R+F +I       WN ++ G A +G      + F  M   GV+PD+IT L VL 
Sbjct: 570 CIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLY 629

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H GLV     Y   M + HG+ PQL+HY C+VDLLGR G LE A   I+ MP  PDA
Sbjct: 630 ACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDA 689

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            I+++LL AC ++GNI LG     + LEL P + + YVLL+NLY  +G      K R+ M
Sbjct: 690 LIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMM 749

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +E+ + K PG SW+      H F AGD+SH Q  +I++++  L
Sbjct: 750 RERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESL 792



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 158/632 (25%), Positives = 290/632 (45%), Gaps = 25/632 (3%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           S+++   +H   +K+GF   ++L +  +  Y K   +  A   F +    D  ++T ++ 
Sbjct: 30  SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMS 89

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLS 209
            Y   G  +++ E+F  M   G   NEF+L+  L +   ++E   G +      K GF S
Sbjct: 90  AYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDS 149

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKD 266
                L +A+++ Y +CG   +A ++F+ +   D+VSW+  +++   A    +A  L+  
Sbjct: 150 NPV--LGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHR 207

Query: 267 LRFNDFQINEYTMINLL--SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           +       NE+T + LL  SS  G   L  GK + A          + +  AL+ MY KC
Sbjct: 208 MIQTGVAPNEFTFVKLLAASSFLG---LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKC 264

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             + DA  +    +  D   W ++I+G++++  F +A+  F  M    ++PN +T + IL
Sbjct: 265 QSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGIL 324

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKRVLSEIDKKNA 443
            A S+  +L    Q+HS ++ +G   D S+ + L+  Y KC N + ++ R    I   N 
Sbjct: 325 NACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNV 384

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           +   +L +         E+++++  + G     N  T S +L AC  +  L Q + +H  
Sbjct: 385 ISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGY 444

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
            +K   D D+ V +A++D Y   G ++DA      +    +  + ++     Q G +   
Sbjct: 445 IIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMA 504

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGL-VREARTYLSCMSDLHGLIPQLEHYACIV 622
            N+   M+K  V+ D  +  + L++   AG+ + E    L C S   GL   +     +V
Sbjct: 505 LNIITHMNKDDVRMDGFSLASFLSAA--AGIPIMETGKQLHCYSVKSGLGSWISVSNGLV 562

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA--GSKLLELQPDN 680
           DL G+ G +  A  +  ++   PDA  W  L+      G++   L A    +L  ++PD 
Sbjct: 563 DLYGKCGCIHDAHRSFLEI-TEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQ 621

Query: 681 ESTYVLLSNLYA-SAGMWNDVG-KLRKEMKEK 710
            +  ++   LYA S G   D+G    + M+EK
Sbjct: 622 ITCLLV---LYACSHGGLVDMGLDYFQSMREK 650



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 163/314 (51%), Gaps = 1/314 (0%)

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           EY+++  + S    R +R G  I +   K+GF E + + N L+S+YGKC  V +AR +FD
Sbjct: 15  EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +  +D  SW  +++ Y + G   +AL++F  ML     PN +T+++ L + S  +    
Sbjct: 75  EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             +  + + KSGF  +  + S LI  Y KC    E+ RV   ++  + V    + S  V 
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
           A   ++AL+LY  +  +    N  TF + L A ++   L  GK +H   +  R + ++ +
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTF-VKLLAASSFLGLNYGKLVHAHLMMWRIELNLVL 253

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
           ++A++DMYCKC +IEDA +  +      +  W A++ G+ Q   + E    F++M   GV
Sbjct: 254 KTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGV 313

Query: 576 KPDEITYLAVLTSC 589
            P+  TY  +L +C
Sbjct: 314 VPNNFTYSGILNAC 327



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 144/289 (49%), Gaps = 5/289 (1%)

Query: 372 SLIPNG--YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           S IP+   Y++   + +  NS+S++  + +HS IIK GF  D  + + L++ YGKC  + 
Sbjct: 8   SKIPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVA 67

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           E++++  E+  ++      L S       H EALEL+ ++  S    N  T S  L++C+
Sbjct: 68  EARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCS 127

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           A+ +   G     L  K+ +D +  + SA+ID Y KCG  ++A R F  +    +  W  
Sbjct: 128 ALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTM 187

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+  + + G + +   L+++M + GV P+E T++ +L +    GL      +   M  + 
Sbjct: 188 MVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLM--MW 245

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
            +   L     +VD+  +   +E A + + ++ +  D  +W +++S  T
Sbjct: 246 RIELNLVLKTALVDMYCKCQSIEDA-VKVSKLTLEYDVFLWTAIISGFT 293



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IKN    D ++   L+  +        A+      ++RD+ITY +L + + +  
Sbjct: 440 KLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTG 499

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL +   +    +R D F+ +S + A      ++  + +H   +K G  S + + +
Sbjct: 500 NHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSN 559

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G ++ Y K G I  A   F +  + D V++  ++ G   NG    +   F +MR  G+E 
Sbjct: 560 GLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEP 619

Query: 178 NEFSLTAVLGA 188
           ++ +   VL A
Sbjct: 620 DQITCLLVLYA 630


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 236/737 (32%), Positives = 383/737 (51%), Gaps = 15/737 (2%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           + +    + A    +  Q      +N +I G     Q   AL  + ++   G+ PD +TF
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 85  SSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
             +VKAC    S++  +IVH     +G    V++ S  I+ YA++G +  A+  F +   
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASFDVKEGE 196
            D+V +  M+ GYV NG+   + ++F+EMR   ++ N  +   VL      A  D+  G 
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL--GT 179

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC- 255
           Q+HG  V  G    + + + N ++ +Y +C     A K+FD   + D+VSW+  I+    
Sbjct: 180 QLHGIAVSCGL--ELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237

Query: 256 DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           +G+  EA  LF+ +     + +  T  + L  V     L+  K+I  +  +   +  V +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            +ALI +Y KC  V  A+ I       D+V   +MI+GY  NG   +AL+ F  +++  +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P   T +SI  A +   +L    ++H  IIK+       + S ++  Y KC  L+ + R
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V + I +K+A+  N++ +         EA+ L+R +       +  + S  L ACA +  
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GK IH L +K     D++ ES++IDMY KCG +  ++R F ++   +   WN+++  
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISA 537

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   E   LF++M + G++PD +T+L ++++C HAG V E   Y   M++ +G+  
Sbjct: 538 YGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPA 597

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           ++EHYAC+ D+ GR G L+ A  TI+ MP PPDA +W +LL AC I+GN++L  +A   L
Sbjct: 598 RMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHL 657

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            +L P N   YVLL+N+ A AG W  V K+R  MKE+ + K PGYSWI V   TH F A 
Sbjct: 658 FDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAA 717

Query: 734 DSSHSQSKEIYKELIKL 750
           D SH  + +IY  L  L
Sbjct: 718 DGSHPLTAQIYSVLDSL 734



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 130/557 (23%), Positives = 257/557 (46%), Gaps = 15/557 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D  + ++LI  + +      A ++LFD    +D + +N +++G  +   SG A+K+F  +
Sbjct: 92  DVFVGSSLIKLYAENGHLSDA-QYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM 150

Query: 73  RYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R+  ++P++ TF+ ++  C S   L     +HG+ +  G      + +  +  Y+K   +
Sbjct: 151 RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCL 210

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
            +A   F      D V++  ++ GYV NG   +++ +F  M S G++ +  +  + L   
Sbjct: 211 QAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270

Query: 190 ---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                +K  ++IHG+ ++   +  V   L +A++++Y +C     A K+  + +  D V 
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDV--FLKSALIDIYFKCRDVEMAQKILCQSSSFDTVV 328

Query: 247 WSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
            +  I+         EA   F+ L     +    T  ++  +  G   L  GK++     
Sbjct: 329 CTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K    E   +G+A++ MY KCG+++ A  +F+ +  KD++ WNSMI   S+NG   +A++
Sbjct: 389 KTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAIN 448

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M       +  +++  L A +N  +L    ++H  +IK     D    S LI  Y 
Sbjct: 449 LFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYA 508

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  LN S+RV   + ++N V  N++ S         E L L+  +  +  + +  TF  
Sbjct: 509 KCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLG 568

Query: 484 VLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
           ++ AC     +++G +  H +  +      +   + V DM+ + G +++A      +   
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFP 628

Query: 543 SLAG-WNAMMMGYAQHG 558
             AG W  ++     HG
Sbjct: 629 PDAGVWGTLLGACHIHG 645



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 221/450 (49%), Gaps = 16/450 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q++ + +  G  LD  ++ TL++ ++K     +A R LFDT  + D++++N +ISG  + 
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSK-CQCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
              G A  LF  +   G++PD+ TF+S +       SL+  + +HG  ++      V+L 
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSL 173
           S  I+ Y K  ++  A+         D V  T M+ GYV NG+  ++ E F   V+ R  
Sbjct: 299 SALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 174 GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              +   S+         +  G+++HG  +K   L   C H+ +AI+++Y +CG+   A 
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKC-HVGSAILDMYAKCGRLDLAC 416

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ ITE D + W+  I +        EA  LF+ +     + +  ++   LS+     
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK+I     K      +   ++LI MY KCG +N +R +FD +  ++ VSWNS+I+
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIIS 536

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y  +G   + L +F  ML   + P+  T   I+ A  ++  + + ++ + H++   + +
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYY-HLMTEEYGI 595

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEI 438
              M   +C+   +G+   L+E+   ++ +
Sbjct: 596 PARMEHYACVADMFGRAGRLDEAFETINSM 625



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 10/313 (3%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY + G + DA+++F  L    + +WN MI G++  G FN AL  +  ML   + P+ YT
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
              +++A    KS+K    VH  +   G   D  + S LI  Y +   L++++ +   I 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           +K++V  N + +  V       A++++  +  S  + N  TF+ VL  CA+   L+ G  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H +A+    + D  V + ++ MY KC  ++ A++ F    +  L  WN ++ GY Q+G 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             E  +LF  M   G+KPD IT+ + L        V E  +   C  ++HG I +   +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPC------VNELLSLKHC-KEIHGYIIR---HA 290

Query: 620 CIVDLLGRVGLLE 632
            ++D+  +  L++
Sbjct: 291 VVLDVFLKSALID 303


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/579 (37%), Positives = 322/579 (55%), Gaps = 42/579 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQ 273
           N+++++  + G   +A ++F  + EPD  SW+  ++  A  D  E +   F  +   DF 
Sbjct: 85  NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +NEY+  + LS+  G   L  G Q+ A   K  +   V +G+ALI MY KCG V  A  +
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +I ++ V+WNS+I  Y +NG  ++AL++F  M++  L P+  T+AS++ A ++  +L
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCAL 264

Query: 394 KQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVL----------------- 435
           K+ +Q+H+ ++K+    DD ++ + L+  Y KC+ +NE++RV                  
Sbjct: 265 KEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSG 324

Query: 436 --------------SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
                         S++ ++N V  NAL +       + EAL L+R +          TF
Sbjct: 325 YARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTF 384

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYD------QDIFVESAVIDMYCKCGTIEDAKRA 535
             +L ACA + DL  G+  H   LK  ++       DIFV +++IDMY KCG+IED  R 
Sbjct: 385 GNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRV 444

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F K+       WNA+++GYAQ+G   E   +F KM   G KPD +T + VL +C HAGLV
Sbjct: 445 FEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLV 504

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            E R Y   M + HGLIP  +HY C+VDLLGR G L  AK  I+ MP+ PDA +W SLL+
Sbjct: 505 EEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 563

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++GNI++G  A  KLLE+ P N   YVLLSN+YA  G W DV ++RK M+++ + K+
Sbjct: 564 ACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQ 623

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           PG SWI V    H F   D SH   K+IY  L  L E M
Sbjct: 624 PGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQM 662



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 259/571 (45%), Gaps = 87/571 (15%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            +LIS  TK      A R        D  ++N+++SG A+  +   +L+ F ++  +   
Sbjct: 85  NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + ++F S + AC  L +  +   VH +  K  +S+ VY+ S  I+ Y+K G +  AE  
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
           F   ++ + V + +++  Y  NG   ++ EVFV M   GLE +E +L +V+ A      +
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCAL 264

Query: 193 KEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-------------- 237
           KEG QIH   VK   F   +   L NA++++Y +C +  +A ++FD              
Sbjct: 265 KEGLQIHARVVKTNKFRDDLV--LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMV 322

Query: 238 -----------------EITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEY 277
                            ++T+ +VVSW+  IA      +  EA  LF+ L+        Y
Sbjct: 323 SGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHY 382

Query: 278 TMINLLSSVGGERILRAGKQI------QAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           T  NLLS+      L  G+Q       Q F ++ G    + +GN+LI MY KCG + D  
Sbjct: 383 TFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGS 442

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ +  +D VSWN++I GY++NG+  +AL +F  ML     P+  TM  +L A S++ 
Sbjct: 443 RVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAG 502

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            +++       + + G +      +C++   G+   LNE+K ++       A+ +N  A 
Sbjct: 503 LVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLI------EAMPVNPDA- 555

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK-AIHCLALKARYD 510
                            +WGS           +L AC    ++E GK A   L     ++
Sbjct: 556 ----------------VVWGS-----------LLAACKVHGNIEMGKHAAEKLLEIDPWN 588

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
              +V   + +MY + G   D  R  RK+ R
Sbjct: 589 SGPYV--LLSNMYAELGRWGDVVRV-RKLMR 616



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 138/569 (24%), Positives = 249/569 (43%), Gaps = 101/569 (17%)

Query: 79  PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---------- 125
           P++  F+ L+ +C    S +   +VH   L   FS  +++ +  I+ Y K          
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 126 ---------------------SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
                                SG +  A   F    + D  ++ +MV G+  +  F++S 
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 165 EVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           E FV+M      LNE+S  + L A     D+  G Q+H    K  + + V  ++ +A+++
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDV--YMGSALID 190

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWS------ERIAAACDGVEAFGLFKDLRFNDFQIN 275
           +Y +CG    A ++F  + E ++V+W+      E+   A + +E F    D   +  + +
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD---SGLEPD 247

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIF 334
           E T+ +++S+      L+ G QI A   K   F + + +GNAL+ MY KC +VN+AR +F
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307

Query: 335 DYLIF-------------------------------KDSVSWNSMIAGYSENGFFNQALD 363
           D +                                 ++ VSWN++IAGY++NG   +AL 
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS------C 417
           +F  +   S+ P  YT  ++L A +N   L    Q H+H++K GF       S       
Sbjct: 368 LFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNS 427

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y KC ++ +  RV  ++ +++ V  NA+          AEAL+++R +     + +
Sbjct: 428 LIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPD 487

Query: 478 GSTFSIVLKACAAMTDLEQGKAIH-------CLALKARYDQDIFVESAVIDMYCKCGTIE 530
             T   VL AC+    +E+G+           + LK  Y       + ++D+  + G + 
Sbjct: 488 HVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY-------TCMVDLLGRAGCLN 540

Query: 531 DAKRAFRKICRDSLA-GWNAMMMGYAQHG 558
           +AK     +  +  A  W +++     HG
Sbjct: 541 EAKNLIEAMPVNPDAVVWGSLLAACKVHG 569



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 181/407 (44%), Gaps = 70/407 (17%)

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
           GL +DL    +  N      LL S    R  R  + + A      F   + I N LI +Y
Sbjct: 5   GLVRDL----YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60

Query: 322 GKCGQVNDARSIFDYLIFK-------------------------------DSVSWNSMIA 350
           GKC  ++DAR +FD +  +                               D  SWNSM++
Sbjct: 61  GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G++++  F ++L+ F  M     + N Y+  S L A +    L    QVH+ + KS +  
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  M S LI  Y KC ++  ++ V S + ++N V  N+L +        +EALE++  + 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTI 529
            S  E +  T + V+ ACA++  L++G  IH   +K  ++  D+ + +A++DMY KC  +
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300

Query: 530 EDAKRA-------------------------------FRKICRDSLAGWNAMMMGYAQHG 558
            +A+R                                F K+ + ++  WNA++ GY Q+G
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG---LVREARTYL 602
              E   LF  + +  + P   T+  +L++C +     L R+A T++
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHV 407



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 190/405 (46%), Gaps = 52/405 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L+ K+ +  D  + + LI  ++K      A         R+++T+N+LI+    + 
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITC---YE 224

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVH------------- 101
           Q+GP   AL++F R+   GL PD  T +S+V AC S   L+E   +H             
Sbjct: 225 QNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDL 284

Query: 102 ----------GVCLKLGFSSRVY-------LVS--GFIENYAKSGEIVSAEMCFRDCLDL 142
                       C K+  + RV+       +VS    +  YA++  + +A   F      
Sbjct: 285 VLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQR 344

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIH 199
           + V++ A++ GY  NGE +++  +F  ++   +    ++   +L A  ++ +   G Q H
Sbjct: 345 NVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAH 404

Query: 200 GFGVKVG--FLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
              +K G  F SG  + +   N+++++Y++CG   D  ++F+++ E D VSW+  I    
Sbjct: 405 THVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYA 464

Query: 256 D---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
               G EA  +F+ +     + +  TMI +L +     ++  G+       + G + +  
Sbjct: 465 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKD 524

Query: 313 IGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENG 356
               ++ + G+ G +N+A+++ + + +  D+V W S++A    +G
Sbjct: 525 HYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 47/242 (19%)

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N S F+ +L +C         + +H   L  ++  +IF+++ +ID+Y KC  ++DA++ F
Sbjct: 14  NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73

Query: 537 RKICR-------------------DSLA------------GWNAMMMGYAQHGCYHEVSN 565
            ++ +                   D  A             WN+M+ G+AQH  + E   
Sbjct: 74  DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------A 619
            F KM +     +E ++ + L++C  AGL+      L+  + +H L+ +  +       +
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSAC--AGLMD-----LNMGTQVHALVSKSRYSTDVYMGS 186

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQ 677
            ++D+  + G +  A+     M I  +   W SL++     G     L    ++++  L+
Sbjct: 187 ALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245

Query: 678 PD 679
           PD
Sbjct: 246 PD 247


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 231/702 (32%), Positives = 382/702 (54%), Gaps = 18/702 (2%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A+   + + +QG  PD  T+S  +K C    S     +VH    +         ++  I 
Sbjct: 50  AISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLIS 109

Query: 122 NYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
            Y+K G+   A   FR      D ++++AMV  +  N    ++   FV+M   G   NE+
Sbjct: 110 LYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEY 169

Query: 181 SLTAVLGASFD---VKEGEQIHGFGVKVGFL-SGVCNHLNNAIMNLYVRC-GQKLDAVKM 235
              A   A      V  G+ I GF +K G+L S VC  +   +++++V+  G  + A K+
Sbjct: 170 CFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVC--VGCGLIDMFVKGRGDLVSAFKV 227

Query: 236 FDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+++ E + V+W+    R+       EA  LF D+ F+ ++ + +T+  ++S+     +L
Sbjct: 228 FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELL 287

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWNSMI 349
             G+Q+ +   + G      +G  LI+MY KC   G +  AR IFD ++  +  SW +MI
Sbjct: 288 LLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMI 347

Query: 350 AGYSENGFFNQ-ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            GY + G +++ ALD+F  M+   +IPN +T +S L+A +N  +L+   QV +H +K GF
Sbjct: 348 TGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGF 407

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              + + + LI+ Y +   ++++++    + +KN +  N +           EALEL+  
Sbjct: 408 SSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNE 467

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I       +  TF+ +L   A++  + +G+ IH   +K+    +  V +A+I MY +CG 
Sbjct: 468 IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGN 527

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           IE A + F  +   ++  W +++ G+A+HG   +   LF+KM + GV+P+E+TY+AVL++
Sbjct: 528 IESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSA 587

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV E   +   M   HG+IP++EHYACIVD+LGR G L  A   I+ MP   DA 
Sbjct: 588 CSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADAL 647

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++ L AC ++GN++LG  A   ++E +P + + Y+LLSNLYAS   W++V  +RK MK
Sbjct: 648 VWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMK 707

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           EK L KE G SW+ V    H FY GD+SH ++ EIY EL  L
Sbjct: 708 EKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNL 749



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 243/489 (49%), Gaps = 37/489 (7%)

Query: 2   IYSLLIKNGH-HLDPILSTTLISHFTK-FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           I+  +IK G+   D  +   LI  F K   D   AF+       R+ +T+  +I+ L +F
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLV 116
             +G A+ LF  + + G  PD FT S ++ AC +++     + +H   ++ G +    + 
Sbjct: 250 GYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309

Query: 117 SGFIENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEMRS 172
              I  YAK    G + +A   F   LD +  ++TAM+ GYV  G +D+   ++F  M  
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  N F+ ++ L A  +   ++ GEQ+    VK+GF S  C  + N+++++Y R G+ 
Sbjct: 370 THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC--VANSLISMYARSGRI 427

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K FD + E +++S++  I A    +   EA  LF ++       + +T  +LLS  
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G+QI A   K G     S+ NALISMY +CG +  A  +F+ +  ++ +SW 
Sbjct: 488 ASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWT 547

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIK 405
           S+I G++++GF  QAL++F  MLE  + PN  T  ++L A S+   + +  +   S   +
Sbjct: 548 SIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTE 607

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G +      +C++   G+  +L+E+ + ++ +  K                  A+AL +
Sbjct: 608 HGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYK------------------ADAL-V 648

Query: 466 YRTIWGSCR 474
           +RT  G+CR
Sbjct: 649 WRTFLGACR 657



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 14/351 (3%)

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG  ++A+    HM+     P+  T +  L+    ++S      VH  + +S   LD   
Sbjct: 44  NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103

Query: 415 ISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           ++ LI+ Y KC    ++  +   +   ++ +  +A+ S     +    AL  +  +  + 
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ-DIFVESAVIDMYCKC-GTIED 531
              N   F+   +AC+    +  G +I    +K  Y Q D+ V   +IDM+ K  G +  
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A + F K+   +   W  M+    Q G   E  +LF  M   G +PD  T   V+++C +
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV---GLLEGAKMTIDQMPIPPDAH 648
             L+   +  L   +  HGL        C++++  +    G +  A+   DQ+ +  +  
Sbjct: 284 MELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVF 341

Query: 649 IWQSLLSACTIYGNID---LGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            W ++++     G  D   L L  G  L  + P++   +   S L A A +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH---FTFSSTLKACANL 389



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 59/91 (64%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK+G  L+  +   LIS +++  +   AF+   D ++R++I++ ++I+G A+  
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL+LF ++  +G+RP+  T+ +++ AC
Sbjct: 558 FATQALELFHKMLEEGVRPNEVTYIAVLSAC 588


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/769 (30%), Positives = 407/769 (52%), Gaps = 22/769 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
            ++S L+K+G  L    S  L++ +++      A R +FD   +   +++++L++  +  
Sbjct: 25  HLHSHLLKSG--LLAGFSNHLLTLYSR-CRLPSAARAVFDEIPDPCHVSWSSLVTAYSNN 81

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
                AL  F  +R +G+  + F    ++K    ++    VH + +       V++ +  
Sbjct: 82  GMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVHALAVATRLVHDVFVANAL 141

Query: 120 IENYAKSGEIVSAEMCFRDCL----DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  Y   G +  A   F + +    + + V++  M+  YV N +   +  VF EM   G 
Sbjct: 142 VAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGE 201

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             NEF  + V+ A   S D++ G Q+HG  V+ G+   V     NA++++Y + G    A
Sbjct: 202 RPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT--ANALVDMYSKLGDIEMA 259

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F+++   DVVSW+  I+          A  L   ++ +    N +T+ ++L +  G 
Sbjct: 260 ATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGA 319

Query: 290 RILRAGKQIQAFCYKV--GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                G+QI  F  K    F E V++G  L+ MY K G ++DAR +FD++  +D + WN+
Sbjct: 320 GAFNLGRQIHGFMVKAVADFDEFVAVG--LVDMYAKHGFLDDARKVFDFMPRRDLILWNA 377

Query: 348 MIAGYSENGFFNQALDMFCHMLE--FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           +I+G S +G   + L +F  M +    L  N  T+AS+L++ ++S+++    QVH+   K
Sbjct: 378 LISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEK 437

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G L D  +I+ LI +Y KC  L+ + +V  E    + +    + + L       +A++L
Sbjct: 438 IGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKL 497

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +     E +    S +L AC +++  EQGK +H   +K ++  D+F  +A++  Y K
Sbjct: 498 FVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAK 557

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG+IEDA  AF  +    +  W+AM+ G AQHG      +LF++M   GV P+ IT  +V
Sbjct: 558 CGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSV 617

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C HAGLV +A+ Y   M +  G+    EHYAC++D+LGR G LE A   ++ MP   
Sbjct: 618 LSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQA 677

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           +A +W +LL A  ++ + +LG +A  KL  L+P+   T+VLL+N YASAGMW+++ K+RK
Sbjct: 678 NAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRK 737

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            MK+  + KEP  SW+ +    H F  GD SH  +++IY +L +L + M
Sbjct: 738 LMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLM 786



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 248/540 (45%), Gaps = 51/540 (9%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           S  A  G S  +  G  +H   +K G L+G  NHL    + LY RC     A  +FDEI 
Sbjct: 9   SALARFGTSRSLFAGAHLHSHLLKSGLLAGFSNHL----LTLYSRCRLPSAARAVFDEIP 64

Query: 241 EPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           +P  VSWS  + A  +     +A   F+ +R      NE+ +  +L        +R G Q
Sbjct: 65  DPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQ 121

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF----KDSVSWNSMIAGYS 353
           + A       +  V + NAL+++YG  G V++AR +FD  +     +++VSWN+MI+ Y 
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +N     A+ +F  M+     PN +  + ++ A + S+ L+   QVH  ++++G+  D  
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVF 241

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
             + L+  Y K   +  +  V  ++   + V  NA  S  V       ALEL   +  S 
Sbjct: 242 TANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSG 301

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              N  T S VLKACA       G+ IH   +KA  D D FV   ++DMY K G ++DA+
Sbjct: 302 LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDAR 361

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD--EITYLAVLTSC-- 589
           + F  + R  L  WNA++ G +  G + EV +LF++M K G+  D    T  +VL S   
Sbjct: 362 KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTAS 421

Query: 590 ----CHAGLVREARTYLSCMSDLH---GLIP------QLEHYACIV-------DLLGRVG 629
               CH   V      +  +SD H   GLI       QL+ YA  V       D++    
Sbjct: 422 SEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLD-YAIKVFKESRSDDIISSTT 480

Query: 630 LL---------EGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           ++         E A     QM    + PD+ +  SLL+ACT     + G    + L++ Q
Sbjct: 481 MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ 540



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 186/394 (47%), Gaps = 23/394 (5%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ + L+  G  R L AG  + +   K G +      N L+++Y +C   + AR++FD +
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
                VSW+S++  YS NG    AL  F  M    +  N + +  +L+   +   ++   
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGA 120

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI----DKKNAVHINALASVL 453
           QVH+  + +  + D  + + L+  YG    ++E++R+  E      ++NAV  N + S  
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V      +A+ ++R +  S    N   FS V+ AC    DLE G+ +H   ++  Y++D+
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           F  +A++DMY K G IE A   F K+    +  WNA + G   HG  H    L  +M   
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL----IPQLEHYACI--VDLLGR 627
           G+ P+  T  +VL +C  AG     R        +HG     +   + +  +  VD+  +
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGR-------QIHGFMVKAVADFDEFVAVGLVDMYAK 353

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            G L+ A+   D MP   D  +W +L+S C+  G
Sbjct: 354 HGFLDDARKVFDFMP-RRDLILWNALISGCSHDG 386


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/723 (32%), Positives = 377/723 (52%), Gaps = 19/723 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+  L+  ++K      A R      +R+++++ + IS  A+  +   AL LF    
Sbjct: 64  DLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFP 123

Query: 74  YQGL------RPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYA 124
             G        P+ F  +S ++AC   +     E VHGV  KLG  + V++ +  +  YA
Sbjct: 124 SAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYA 183

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL-- 182
           K+G I +A   F      + V +TA++ GY   G+   + E+F  M   G+  + F L  
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLAS 243

Query: 183 --TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
             +A  G  F V+ G QIHG+  +    S     + NA+++LY +C + L A ++FD + 
Sbjct: 244 AASACSGLGF-VEGGRQIHGYAYRTAAESDAS--VVNALIDLYCKCSRLLLARRLFDSME 300

Query: 241 EPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             ++VSW+  IA         EA  +F  L    +Q + +   ++L+S G    +  G+Q
Sbjct: 301 NRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQ 360

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + A   K        + NALI MY KC  + +AR++F+ L   D++S+N+MI GY+  G 
Sbjct: 361 VHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGD 420

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
              A+++F  M   SL P+  T  S+L   S+   L+ + Q+H  I+KSG  LD    S 
Sbjct: 421 LTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSA 480

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y K + ++++K V S +  ++ V  NA+   L       EA++L+  +  S    N
Sbjct: 481 LIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPN 540

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             TF  ++   + +  +  G+  H   +KA  D D  + +A+IDMY KCG IE+ +  F 
Sbjct: 541 EFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFE 600

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
                 +  WN+M+  YAQHG   E  ++F  M   GV+P+ +T+++VL++C HAGLV E
Sbjct: 601 STLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDE 660

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              + + M   + + P  EHYA +V+L GR G L  AK  I++MPI P A IW+SLLSAC
Sbjct: 661 GLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSAC 720

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++GN+++G  A    L   P +    VL+SN+YAS G+W D  KLR+ M    + KEPG
Sbjct: 721 HLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPG 780

Query: 718 YSW 720
           YSW
Sbjct: 781 YSW 783



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 272/563 (48%), Gaps = 15/563 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ +  K G   +  + T L++ + K      A         R+ +T+ A+I+G ++  
Sbjct: 158 QVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAG 217

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q+G AL+LF R+   G+RPD F  +S   AC   G ++    +HG   +    S   +V+
Sbjct: 218 QAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVN 277

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K   ++ A   F    + + V++T M+ GY+ N    ++  +F ++   G + 
Sbjct: 278 ALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQP 337

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+ T++L   G+   + +G Q+H   +K    S    ++ NA++++Y +C    +A  
Sbjct: 338 DVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESD--EYVKNALIDMYAKCEHLTEARA 395

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + E D +S++  I   A   D   A  +F  +R+   + +  T ++LL        
Sbjct: 396 VFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSD 455

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   KQI     K G    +  G+ALI +Y K   V+DA+ +F  +  +D V WN+MI G
Sbjct: 456 LELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFG 515

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            ++N    +A+ +F  +    L PN +T  +++   S   S+    Q H+ IIK+G   D
Sbjct: 516 LAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSD 575

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI  Y KC  + E + +      K+ +  N++ S         EAL ++  + G
Sbjct: 576 PHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEG 635

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
           +  E N  TF  VL ACA    +++G   H  ++K +Y  +   E  ++V++++ + G +
Sbjct: 636 AGVEPNYVTFVSVLSACAHAGLVDEGLH-HFNSMKTKYAVEPGTEHYASVVNLFGRSGKL 694

Query: 530 EDAKRAFRKICRDSLAG-WNAMM 551
             AK    ++  + +A  W +++
Sbjct: 695 HAAKEFIERMPIEPVATIWRSLL 717



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 152/324 (46%), Gaps = 6/324 (1%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LLS + G+R+ R      A     G +  + + N L+  Y K G++ DAR +FD +  ++
Sbjct: 36  LLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRN 95

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI------PNGYTMASILEAVSNSKSLKQ 395
            VSW S I+ Y+++G  + AL +F               PN + +AS L A + S++ + 
Sbjct: 96  LVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARF 155

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             QVH    K G   +  + + L+  Y K   ++ +  V   +  +N V   A+ +    
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQ 215

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
           A     ALEL+  +       +    +    AC+ +  +E G+ IH  A +   + D  V
Sbjct: 216 AGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASV 275

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            +A+ID+YCKC  +  A+R F  +   +L  W  M+ GY Q+    E  ++F ++S+ G 
Sbjct: 276 VNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGW 335

Query: 576 KPDEITYLAVLTSCCHAGLVREAR 599
           +PD     ++L SC     + + R
Sbjct: 336 QPDVFACTSILNSCGSLAAIWQGR 359


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/765 (31%), Positives = 399/765 (52%), Gaps = 14/765 (1%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++S + K G   D +   T+IS          A   L   Q    + +NA+IS  ++   
Sbjct: 248  LFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGL 307

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
                  L+  ++ QGL P   TF+S++ A  S+    E + +H   +K G  + V++ S 
Sbjct: 308  ESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSS 367

Query: 119  FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             I  Y K G I  A+  F    + + V + AM+ G+V N   +++ ++F  MR   LE +
Sbjct: 368  LINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEAD 427

Query: 179  EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            +F+  +VLGA  ++     G Q+H   +K    + +   + NA++++Y + G    A  +
Sbjct: 428  DFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADL--FVANAMLDMYSKLGAIDVAKAL 485

Query: 236  FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            F  I   D VSW+  I       +  EA  + K ++      +E +    +++    R  
Sbjct: 486  FSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRAT 545

Query: 293  RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
              GKQI     K       ++G++LI +Y K G V  +R +  ++     V  N++I G 
Sbjct: 546  ETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGL 605

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +N   ++A+++F  +L+    P+ +T ASIL   +   S     QVHS+ +KS  L  D
Sbjct: 606  VQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQD 665

Query: 413  SMIS-CLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            + +   L+  Y KC  L ++ ++L+E+ D KN V   A  S         ++L ++  + 
Sbjct: 666  TSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMR 725

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                  + +TF+ VLKAC+ +  L  GK IH L +K+ +       SA++DMY KCG + 
Sbjct: 726  SHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVI 785

Query: 531  DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             +   F+++  + ++  WN+M++G+A++G  +E   LF KM +  +KPDE+T L VL +C
Sbjct: 786  SSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIAC 845

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             HAGL+ E R     MS ++G++P+++HYAC++DLLGR G L+ A+  IDQ+P   D  I
Sbjct: 846  SHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVI 905

Query: 650  WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            W + L+AC ++ + + G +A  KL+E++P   STYV LS+L+A+AG W +    R+ M+E
Sbjct: 906  WATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMRE 965

Query: 710  KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K + K PG SWI VG  T+ F   D+ H  +  IYK L  L   M
Sbjct: 966  KGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMM 1010



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 173/704 (24%), Positives = 318/704 (45%), Gaps = 75/704 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G          L+  + K  + + A R        D I + ++I+G  R  
Sbjct: 181 QVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVG 240

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   AL LF R+   G  PD  T+ +++    S+                          
Sbjct: 241 RYQQALALFSRMEKMGSAPDQVTYVTIISTLASM-------------------------- 274

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
                 G +  A    +       VA+ A++  Y  +G   +   ++ +M+  GL     
Sbjct: 275 ------GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRS 328

Query: 181 SLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +  ++L A     +FD  EG+QIH   VK G  + V   + ++++NLYV+ G   DA K+
Sbjct: 329 TFASMLSAAASMTAFD--EGQQIHAAAVKHGLDANV--FVGSSLINLYVKHGCISDAKKV 384

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD  TE ++V W+  +          E   +F+ +R  D + +++T +++L +      L
Sbjct: 385 FDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSL 444

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+Q+     K      + + NA++ MY K G ++ A+++F  +  KDSVSWN++I G 
Sbjct: 445 DIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGL 504

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           + N    +A+ M   M  + + P+  + A+ + A SN ++ +   Q+H   IK     + 
Sbjct: 505 AHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNH 564

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           ++ S LI  Y K   +  S++VL+ +D  + V INAL + LV  +   EA+EL++ +   
Sbjct: 565 AVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKD 624

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQDIFVESAVIDMYCKCGTIED 531
             + +  TF+ +L  C        GK +H   LK A  +QD  +  +++ +Y KC  +ED
Sbjct: 625 GFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLED 684

Query: 532 AKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           A +   ++    +L  W A + GYAQ+G   +   +F +M    V+ DE T+ +VL +C 
Sbjct: 685 ANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACS 744

Query: 591 HAGLVREARTYLSCMSDLHGLIPQ-------------LEHYACIVDLLGRVGLLEGAKMT 637
               + + +       ++HGLI +             ++ Y+   D++    + +  K  
Sbjct: 745 EIAALTDGK-------EIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNK 797

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPD 679
            + MP       W S++      G  +  LL   K+ E  L+PD
Sbjct: 798 QNIMP-------WNSMIVGFAKNGYANEALLLFQKMQESQLKPD 834



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 276/598 (46%), Gaps = 62/598 (10%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLG 108
           Y AL+  L+R C+   A   FD   ++         +   +ACG      ++H   L+LG
Sbjct: 44  YAALLGSLSRECRH--AHHPFDATPHR---------THQARACG------VLHARVLRLG 86

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEV 166
              R  L    ++ Y +SG +  A      C        A ++++  +  +G      + 
Sbjct: 87  LPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARSGSPRDVLDA 146

Query: 167 FVEMR-SLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           F  +R S+G   ++F L  VL A      +++G Q+H   +K GF S         ++++
Sbjct: 147 FQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSA--FCQAGLVDM 204

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           Y +C +  DA ++FD I  PD + W+  IA    G    G ++              + L
Sbjct: 205 YAKCVEVKDARRVFDGIACPDTICWASMIA----GYHRVGRYQQ------------ALAL 248

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
            S     R+ + G       Y       V+I + L SM    G+++DAR++   +    +
Sbjct: 249 FS-----RMEKMGSAPDQVTY-------VTIISTLASM----GRLSDARTLLKRIQMPST 292

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           V+WN++I+ YS++G  ++   ++  M    L+P   T AS+L A ++  +  +  Q+H+ 
Sbjct: 293 VAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAA 352

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            +K G   +  + S LI  Y K   ++++K+V     +KN V  NA+    V      E 
Sbjct: 353 AVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEET 412

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           +++++ +  +  E +  TF  VL AC  +  L+ G+ +HC+ +K   D D+FV +A++DM
Sbjct: 413 IQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDM 472

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y K G I+ AK  F  I       WNA+++G A +    E   +  +M  +G+ PDE+++
Sbjct: 473 YSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSF 532

Query: 583 LAVLTSCCHAGLVREART--YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
              + +C +   +R   T   + C S  + +       + ++DL  + G +E ++  +
Sbjct: 533 ATAINACSN---IRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 587



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/560 (24%), Positives = 273/560 (48%), Gaps = 31/560 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           QI++  +K+G   +  + ++LI+ + K    +D ++ F F   +  ++I+ +NA++ G  
Sbjct: 348 QIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF---STEKNIVMWNAMLYGFV 404

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
           +       +++F  +R   L  D FTF S++ AC +L   +I   VH + +K    + ++
Sbjct: 405 QNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLF 464

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y+K G I  A+  F      D+V++ A++ G   N E +++  +   M+  G
Sbjct: 465 VANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYG 524

Query: 175 LELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNH-LNNAIMNLYVRCGQKL 230
           +  +E S    + A  +++    G+QIH   +K    S   NH + +++++LY + G   
Sbjct: 525 IAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCS---NHAVGSSLIDLYSKFGDVE 581

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            + K+   +    +V  +  I          EA  LF+ +  + F+ + +T  ++LS   
Sbjct: 582 SSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCT 641

Query: 288 GERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSW 345
           G      GKQ+ ++  K   + +  S+G +L+ +Y KC  + DA  +  +    K+ V W
Sbjct: 642 GPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEW 701

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            + I+GY++NG+ +Q+L MF  M    +  +  T AS+L+A S   +L    ++H  IIK
Sbjct: 702 TATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIK 761

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALE 464
           SGF+  ++  S L+  Y KC  +  S  +  E+ +K+N +  N++           EAL 
Sbjct: 762 SGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALL 821

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI-----HCLALKARYDQDIFVESAV 519
           L++ +  S  + +  T   VL AC+    + +G+ +         +  R D      + +
Sbjct: 822 LFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDH----YACL 877

Query: 520 IDMYCKCGTIEDAKRAFRKI 539
           ID+  + G +++A+    ++
Sbjct: 878 IDLLGRGGHLQEAQEVIDQL 897



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 178/365 (48%), Gaps = 16/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   IK     +  + ++LI  ++KF D   + + L       ++  NALI+GL +  
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNN 609

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVYLV 116
           +   A++LF ++   G +P  FTF+S++  C     + I   VH   LK    +    L 
Sbjct: 610 REDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLG 669

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
              +  Y K   +  A     +  D  N V +TA + GY  NG  D+S  +F  MRS  +
Sbjct: 670 ISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDV 729

Query: 176 ELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E +  +VL A  ++    +G++IHG  +K GF+S       +A+M++Y +CG  + +
Sbjct: 730 RSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVS--YETAASALMDMYSKCGDVISS 787

Query: 233 VKMFDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            ++F E+  + +++ W+  I   A +G   EA  LF+ ++ +  + +E T++ +L +   
Sbjct: 788 FEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSH 847

Query: 289 ERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G+ +  +     G +  V     LI + G+ G + +A+ + D L F+ D V W 
Sbjct: 848 AGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWA 907

Query: 347 SMIAG 351
           + +A 
Sbjct: 908 TFLAA 912



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 25/281 (8%)

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H+ +++ G  L   +   L+  YG+   +  + R L       A    A + +    SC
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVL----SC 133

Query: 459 HA---------EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           HA         +A +  R   G   +  G   ++VL AC+ +  LEQG+ +HC  LK+ +
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFG--LAVVLSACSRLGALEQGRQVHCDVLKSGF 191

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
               F ++ ++DMY KC  ++DA+R F  I C D++  W +M+ GY + G Y +   LF+
Sbjct: 192 CSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTIC-WASMIAGYHRVGRYQQALALFS 250

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M K G  PD++TY+ ++++    G + +ART L  +      +P    +  ++    + 
Sbjct: 251 RMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAVISSYSQS 305

Query: 629 GL---LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           GL   + G    + +  + P    + S+LSA       D G
Sbjct: 306 GLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEG 346



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/356 (21%), Positives = 144/356 (40%), Gaps = 51/356 (14%)

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD--YLIFKDSVSWNSMIA 350
           RA   + A   ++G      +G+AL+ +YG+ G+V  A               + +S+++
Sbjct: 73  RACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLS 132

Query: 351 GYSENGFFNQALDMFCHMLEFSL--IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            ++ +G     LD F   L  S+   P+ + +A +L A S   +L+Q  QVH  ++KSGF
Sbjct: 133 CHARSGSPRDVLDAF-QRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGF 191

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                  + L+  Y KC  + +++RV   I   + +             C A  +  Y  
Sbjct: 192 CSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTI-------------CWASMIAGYHR 238

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ-----DIFVESAVIDMY 523
           +                           G+    LAL +R ++     D      +I   
Sbjct: 239 V---------------------------GRYQQALALFSRMEKMGSAPDQVTYVTIISTL 271

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
              G + DA+   ++I   S   WNA++  Y+Q G   EV  L+  M + G+ P   T+ 
Sbjct: 272 ASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFA 331

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           ++L++        E +  +   +  HGL   +   + +++L  + G +  AK   D
Sbjct: 332 SMLSAAASMTAFDEGQQ-IHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 386


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/728 (31%), Positives = 380/728 (52%), Gaps = 41/728 (5%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF-SSRVYLVSGFI 120
           A+  +  +   G RPD F F +++KA   LQ+    E +H   +K G+ SS V + +  +
Sbjct: 76  AISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLV 135

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K G I      F    D D V++ + +       +++++ E F  M+   +EL+ F
Sbjct: 136 NMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSF 195

Query: 181 SLTAV------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +L +V      LG    ++ G+Q+HG+ ++VG         NNA+M +Y + G+  D+  
Sbjct: 196 TLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQK---TFTNNALMAMYAKLGRVDDSKA 252

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+   + D+VSW+  I++        EA   F+ +     +++  T+ ++L +      
Sbjct: 253 LFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLER 312

Query: 292 LRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           L  GK+I A+  +    +E   +G+AL+ MY  C QV   R +FD+++ +    WN+MI+
Sbjct: 313 LDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMIS 372

Query: 351 GYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           GY+ NG   +AL +F  M++ + L+PN  TMAS++ A  + ++      +H + +K GF 
Sbjct: 373 GYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFK 432

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + L+  Y +   ++ S+ +   ++ ++ V  N + +  V +  ++ AL L   +
Sbjct: 433 EDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEM 492

Query: 470 W-----------------GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                             G   + N  T   VL  CAA+  + +GK IH  A++     D
Sbjct: 493 QRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASD 552

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-S 571
           I V SA++DMY KCG +  ++R F ++   ++  WN ++M    HG   E   LF  M +
Sbjct: 553 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 612

Query: 572 KFG----VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           + G     KP+E+T++ V  +C H+GL+ E       M   HG+ P  +HYAC+VDLLGR
Sbjct: 613 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 672

Query: 628 VGLLEGAKMTIDQMPIPPD-AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
            G LE A   ++ MP   D    W SLL AC I+ N++LG +A   LL L+P+  S YVL
Sbjct: 673 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVL 732

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           LSN+Y+SAG+WN   ++RK M++  + KEPG SWI      H F AGD SH QS++++  
Sbjct: 733 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGF 792

Query: 747 LIKLYEHM 754
           L  L E M
Sbjct: 793 LETLSEKM 800



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 277/549 (50%), Gaps = 41/549 (7%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCN 213
           + +F ++   ++EM   G   + F+  AVL A     D+K GEQIH   VK G+ S    
Sbjct: 70  SNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVT 129

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFN 270
            + N ++N+Y +CG   D  K+FD IT+ D VSW+  IAA C      +A   F+ ++  
Sbjct: 130 -VANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQME 188

Query: 271 DFQINEYTMINLL---SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           + +++ +T++++    S++G    LR GKQ+  +  +VG  +  +  NAL++MY K G+V
Sbjct: 189 NMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFT-NNALMAMYAKLGRV 247

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
           +D++++F+  + +D VSWN+MI+ +S++  F++AL  F  M+   +  +G T+AS+L A 
Sbjct: 248 DDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPAC 307

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           S+ + L    ++H++++++  L+++S + S L+  Y  C  +   +RV   I  +     
Sbjct: 308 SHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELW 367

Query: 447 NALASVLVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
           NA+ S         +AL L+   I  +    N +T + V+ AC         ++IH  A+
Sbjct: 368 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAV 427

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K  + +D +V++A++DMY + G ++ ++  F  +       WN M+ GY   G Y     
Sbjct: 428 KLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALV 487

Query: 566 LFNKMSKF-----------------GVKPDEITYLAVLTSCCH-AGLVREARTYLSCMSD 607
           L ++M +                    KP+ IT + VL  C   A + +    +   + +
Sbjct: 488 LLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRN 547

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           +  L   +   + +VD+  + G L  ++   ++MP   +   W  L+ AC ++G      
Sbjct: 548 M--LASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGK----- 599

Query: 668 LAGSKLLEL 676
             G + LEL
Sbjct: 600 --GEEALEL 606



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 277/595 (46%), Gaps = 51/595 (8%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI++  +K G+    + ++ TL++ + K        +      +RD +++N+ I+ L RF
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS------LQENEIVHGVCLKLGFSSRV 113
            +   AL+ F  ++ + +   +FT  S+  AC +      L+  + +HG  L++G   + 
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +  +  +  YAK G +  ++  F   +D D V++  M+  +  +  F ++   F  M   
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+EL+  ++ +VL A   ++    G++IH + ++   L    + + +A++++Y  C Q  
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIE-NSFVGSALVDMYCNCRQVE 350

Query: 231 DAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDL-RFNDFQINEYTMINLLSSV 286
              ++FD I    +  W+  I+  A +G++  A  LF ++ +      N  TM +++ + 
Sbjct: 351 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 410

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                    + I  +  K+GF E   + NAL+ MY + G+++ + +IFD +  +D VSWN
Sbjct: 411 VHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWN 470

Query: 347 SMIAGYSENGFFNQALDMFCHMLEF-----------------SLIPNGYTMASILEAVSN 389
           +MI GY  +G ++ AL +   M                       PN  T+ ++L   + 
Sbjct: 471 TMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAA 530

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
             ++ +  ++H++ I++    D ++ S L+  Y KC  LN S+RV +E+  KN +  N L
Sbjct: 531 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVL 590

Query: 450 ASVLVYASCHAEALELYRTI-----WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
                      EALEL++ +      G   + N  TF  V  AC+    + +G     L 
Sbjct: 591 IMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG-----LN 645

Query: 505 LKARYDQDIFVESA------VIDMYCKCGTIEDAKRAFRKICR--DSLAGWNAMM 551
           L  R   D  VE        V+D+  + G +E+A      +    D +  W++++
Sbjct: 646 LFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 700



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           + + SW   +   + +  F +A+  +  M      P+ +   ++L+AVS  + LK   Q+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 400 HSHIIKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           H+  +K G+     ++ + L+  YGKC  + +  +V   I  ++ V  N+  + L     
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACA---AMTDLEQGKAIHCLALKARYDQDIFV 515
             +ALE +R +     E++  T   V  AC+    M  L  GK +H  +L+   DQ  F 
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            +A++ MY K G ++D+K  F       +  WN M+  ++Q   + E    F  M   GV
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293

Query: 576 KPDEITYLAVLTSCCH 591
           + D +T  +VL +C H
Sbjct: 294 ELDGVTIASVLPACSH 309


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/737 (31%), Positives = 382/737 (51%), Gaps = 15/737 (2%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           + +    + A    +  Q      +N +I G     Q   AL  + ++   G+ PD +TF
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 85  SSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
             +VKAC    S++  +IVH     +G    V++ S  I+ YA++G +  A+  F +   
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASFDVKEGE 196
            D+V +  M+ GYV NG+   + ++F+EMR   ++ N  +   VL      A  D+  G 
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL--GT 179

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC- 255
           Q+HG  V  G    + + + N ++ +Y +C     A K+FD + + D+VSW+  I+    
Sbjct: 180 QLHGIAVGCGL--ELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237

Query: 256 DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           +G+  EA  LF+ +     + +  T  + L  V     L+  K+I  +  +   +  V +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            +ALI +Y KC  V  A+         D+V   +MI+GY  NG   +AL+ F  +++  +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P   T +SI  A +   +L    ++H  IIK+       + S ++  Y KC  L+ + R
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V + I +K+A+  N++ +         EA+ L+R +       +  + S  L ACA +  
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GK IH L +K     D++ ES++IDMY KCG +  ++R F ++   +   WN+++  
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISA 537

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   E   LF++M + G++PD +T+L ++++C HAG V E   Y   M++ +G+  
Sbjct: 538 YGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPA 597

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           ++EHYAC+ D+ GR G L  A  TI+ MP PPDA +W +LL AC I+GN++L  +A   L
Sbjct: 598 RMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHL 657

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            +L P N   YVLL+N+ A AG W  V K+R  MKE+ + K PGYSWI V   TH F A 
Sbjct: 658 FDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAA 717

Query: 734 DSSHSQSKEIYKELIKL 750
           D SH  + +IY  L  L
Sbjct: 718 DGSHPLTAQIYSVLDSL 734



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 131/557 (23%), Positives = 255/557 (45%), Gaps = 15/557 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D  + ++LI  + +      A ++LFD    +D + +N +++G  +   SG A+K+F  +
Sbjct: 92  DVFVGSSLIKLYAENGHLSDA-QYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM 150

Query: 73  RYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R+  ++P++ TF+ ++  C S   L     +HG+ +  G      + +  +  Y+K   +
Sbjct: 151 RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCL 210

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
            +A   F      D V++  ++ GYV NG   +++ +F  M S G++ +  +  + L   
Sbjct: 211 QAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270

Query: 190 ---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                +K  ++IHG+ ++   +  V   L +A++++Y +C     A K   + +  D V 
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDV--FLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVV 328

Query: 247 WSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
            +  I+         EA   F+ L     +    T  ++  +  G   L  GK++     
Sbjct: 329 CTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K    E   +G+A++ MY KCG+++ A  +F+ +  KD++ WNSMI   S+NG   +A++
Sbjct: 389 KTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAIN 448

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M       +  +++  L A +N  +L    ++H  +IK     D    S LI  Y 
Sbjct: 449 LFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYA 508

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  LN S+RV   + +KN V  N++ S         E L L+  +  +  + +  TF  
Sbjct: 509 KCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLG 568

Query: 484 VLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
           ++ AC     +++G +  H +  +      +   + V DM+ + G + +A      +   
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFP 628

Query: 543 SLAG-WNAMMMGYAQHG 558
             AG W  ++     HG
Sbjct: 629 PDAGVWGTLLGACHIHG 645



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 220/450 (48%), Gaps = 16/450 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++ + +  G  LD  ++ TL++ ++K     +A R LFDT    D++++N +ISG  + 
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSK-CQCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
              G A  LF  +   G++PD+ TF+S +       SL+  + +HG  ++      V+L 
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSL 173
           S  I+ Y K  ++  A+         D V  T M+ GYV NG+  ++ E F   V+ R  
Sbjct: 299 SALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 174 GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              +   S+         +  G+++HG  +K   L   C H+ +AI+++Y +CG+   A 
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKC-HVGSAILDMYAKCGRLDLAC 416

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ ITE D + W+  I +        EA  LF+ +     + +  ++   LS+     
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK+I     K      +   ++LI MY KCG +N +R +FD +  K+ VSWNS+I+
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIIS 536

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y  +G   + L +F  ML   + P+  T   I+ A  ++  + + ++ + H++   + +
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYY-HLMTEEYGI 595

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEI 438
              M   +C+   +G+   L+E+   ++ +
Sbjct: 596 PARMEHYACVADMFGRAGRLHEAFETINSM 625



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 157/313 (50%), Gaps = 10/313 (3%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY + G + DA+++F  L    + +WN MI G++  G FN AL  +  ML   + P+ YT
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
              +++A    KS+K    VH  +   G   D  + S LI  Y +   L++++ +   I 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           +K++V  N + +  V       A++++  +  S  + N  TF+ VL  CA+   L+ G  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H +A+    + D  V + ++ MY KC  ++ A++ F  + +  L  WN ++ GY Q+G 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             E  +LF  M   G+KPD IT+ + L        V E  +   C  ++HG I +   +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPC------VNELLSLKHC-KEIHGYIIR---HA 290

Query: 620 CIVDLLGRVGLLE 632
            ++D+  +  L++
Sbjct: 291 VVLDVFLKSALID 303


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 251/773 (32%), Positives = 409/773 (52%), Gaps = 28/773 (3%)

Query: 2   IYSLLIKNGH-HLDPILSTTLISHFTKFADFRRAFRFLFD------TQNRDIITYNALIS 54
           I+S +I  G  + DP ++T+LI+ + K   F  A + +FD         +D+  +N++++
Sbjct: 71  IHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVK-VFDKLPESEVSGQDVTFWNSIVN 129

Query: 55  GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRV 113
           G  RF      +  F R++  G+RPDA++   L+ A  G L   + +HG  ++  F    
Sbjct: 130 GYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLGYAKQIHGYSVRKVFYGDP 189

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           +L SG I  Y   G  + A   F++  D  NV A+  M+ G+  NG ++ S EV++  ++
Sbjct: 190 FLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKN 249

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCG 227
             ++L   S T+ L A      V  G Q+H   VK+GF +   VC  L    + +Y +C 
Sbjct: 250 ENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSL----LTMYSKCK 305

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMIN 281
              DA  +FD+++      W+  I+A      + DG++   ++K ++      +  T  N
Sbjct: 306 LVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLK---IYKQMKVLQIPPDSLTATN 362

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LSS         G+ I A   K      V++ +AL++MY KCG  +DA SIF+ +  +D
Sbjct: 363 VLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRD 422

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V+W SMI+G+ +N  + +AL+ +  M  +   P+   MAS++ A +  K++     +H 
Sbjct: 423 VVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHG 482

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
             IKSG   D  + S L+  Y K N    S  V S++  KN V  N++ S          
Sbjct: 483 LAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDL 542

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           ++ L+  +       +  + + VL + +++  L +GKA+H   ++ R   D+ +E+A+ID
Sbjct: 543 SISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALID 602

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY KCG ++ A+  F+ + + +L  WN M+ G   HG + +  +LF++M  FG+ PD+IT
Sbjct: 603 MYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDIT 662

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           ++++LTSC H G + E       M+  HG+ P++EHY  IVDLLGR G L+ A   +  +
Sbjct: 663 FISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNL 722

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
           PI PD  IW SLL +C ++ N++LG LA  KLL+++P   S YV L NLY    + +   
Sbjct: 723 PIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAA 782

Query: 702 KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            LR  MKEK L K PG SWI VG     F++GDSS  ++ EIY  L  L  +M
Sbjct: 783 NLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNM 835



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 320/681 (46%), Gaps = 47/681 (6%)

Query: 36  RFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG--- 92
           R L +  + D+I  +  I  L +  Q   AL+ + R     L    FT+ SL+KACG   
Sbjct: 9   RKLSNLAHSDLI--DPKIVTLVQQGQYVDALQFYSR---NPLNATRFTYPSLLKACGFLS 63

Query: 93  SLQENEIVHGVCLKLG-FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD-----LDNVA 146
           +LQ  + +H   +  G F S  Y+ +  I  Y K G   +A   F    +      D   
Sbjct: 64  NLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTF 123

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS-FDVKEGEQIHGFGVKV 205
           + ++V GY   G   +    F  M+  G+  + +SL  +LGAS   +   +QIHG+ V+ 
Sbjct: 124 WNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLGYAKQIHGYSVRK 183

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIAAACDG------V 258
            F       L + ++ +Y  CG+ LDA ++F E+ +  +VV+W+  I    +       +
Sbjct: 184 VFYGD--PFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSL 241

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           E + L K+    + ++   +  + LS+      +  G Q+     K+GF     +  +L+
Sbjct: 242 EVYLLAKN---ENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLL 298

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +MY KC  V DA ++FD +  K +  WN+MI+ Y  NG     L ++  M    + P+  
Sbjct: 299 TMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSL 358

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  ++L +     S      +H+ ++K     + ++ S L+T Y KC   +++  + + I
Sbjct: 359 TATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTI 418

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             ++ V   ++ S       + EALE Y ++     + +    + V+ AC  + ++  G 
Sbjct: 419 KGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGC 478

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH LA+K+  +QD+FV S+++DMY K    + +   F  +   +L  WN+++  Y ++G
Sbjct: 479 TIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNG 538

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL-----IP 613
                 +LF++M+++G+ PD ++  +VL S     ++R+ +        +HG      IP
Sbjct: 539 LPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKA-------VHGYLIRQRIP 591

Query: 614 ---QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI--DLGLL 668
              QLE+   ++D+  + G L+ A+     M +  +   W  +++ C  +G+    + L 
Sbjct: 592 SDLQLEN--ALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGCGSHGDWLKAMSLF 648

Query: 669 AGSKLLELQPDNESTYVLLSN 689
              +   + PD+ +   LL++
Sbjct: 649 DEMRSFGIAPDDITFISLLTS 669



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 198/408 (48%), Gaps = 11/408 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  L+K G   DP + T+L++ ++K      A         +    +NA+IS      
Sbjct: 277 QVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNG 336

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +S   LK++ +++   + PD+ T ++++ +C   GS     ++H   +K    S V L S
Sbjct: 337 RSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQS 396

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+K G    A   F      D VA+ +M+ G+  N ++ ++ E +  M   G + 
Sbjct: 397 ALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKP 456

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   + +V+ A   +K    G  IHG  +K G    V   + ++++++Y +      +  
Sbjct: 457 DSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDV--FVASSLVDMYSKFNFPKMSGN 514

Query: 235 MFDEITEPDVVSWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   ++V+W+  I+  C +G+   +  LF  +       +  ++ ++L SV    +
Sbjct: 515 VFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAV 574

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR GK +  +  +      + + NALI MY KCG +  A+ IF  ++  + V+WN MIAG
Sbjct: 575 LRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAG 634

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
              +G + +A+ +F  M  F + P+  T  S+L + ++   +++ +++
Sbjct: 635 CGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKL 682


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 229/760 (30%), Positives = 402/760 (52%), Gaps = 15/760 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IK G   D  + T+L+  +  F           + +  +I+++ +L+ G A   
Sbjct: 80  QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG 139

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                + ++ RLR  G+  +    ++++++CG L +  +   V G  +K G  + V + +
Sbjct: 140 CVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVAN 199

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +     I  A   F D  + D +++ +++   V NG  +KS E F +MR    + 
Sbjct: 200 SLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKT 259

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +++A+L   G++ +++ G  +HG  VK G  S VC  + N+++++Y + G+  DA  
Sbjct: 260 DYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVC--VCNSLLSMYSQAGKSEDAEF 317

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++ E D++SW+  +A+  D      A  L  ++       N  T    LS+      
Sbjct: 318 VFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLET 377

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   K + AF   +G    + IGNAL++MYGK G +  A+ +   +  +D V+WN++I G
Sbjct: 378 L---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG 434

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFLL 410
           +++N   N A++ F  + E  +  N  T+ ++L A +S    L   M +H+HI+ +GF L
Sbjct: 435 HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFEL 494

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S LIT Y +C  LN S  +   +  KN+   NA+ S   +     EAL+L   + 
Sbjct: 495 ETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMR 554

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                ++  +FS+       +T L++G+ +H L +K  ++ + +V +A +DMY KCG I+
Sbjct: 555 NDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEID 614

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           D  R   +    S   WN ++   A+HG + +    F++M   G++PD +T++++L++C 
Sbjct: 615 DVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACS 674

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV E   Y S MS   G+   +EH  CI+DLLGR G L  A+  I++MP+PP   +W
Sbjct: 675 HGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVW 734

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLL+AC I+GN++L   A  +L EL   ++S YVL SN+ AS   W DV  +RK+M+  
Sbjct: 735 RSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESH 794

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + K+P  SW+ +      F  GD  H Q+ EIY +L +L
Sbjct: 795 NIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEEL 834



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 177/687 (25%), Positives = 323/687 (47%), Gaps = 49/687 (7%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           ++KF     A         R+  ++N L+SG  R      A++ F  +   G+RP ++  
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 85  SSLVKAC---GSLQENEI-VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +SLV AC   G + E    VH   +K G +  V++ +  +  Y   G +   +M F++  
Sbjct: 62  ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQ 197
           + + V++T+++ GY +NG   +   V+  +R  G+  NE ++  V+   G   D   G Q
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           + G  +K G  + V   + N++++++  C    +A  +FD++ E D +SW+  I A+   
Sbjct: 182 VLGSVIKSGLDTTVS--VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 258 ---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               ++   F  +R+   + +  T+  LL   G  + LR G+ +     K G    V + 
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+L+SMY + G+  DA  +F  +  +D +SWNSM+A + +NG + +AL++   ML+    
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            N  T  + L A  N ++LK    VH+ +I  G   +  + + L+T YGK  ++  ++RV
Sbjct: 360 TNYVTFTTALSACYNLETLK---IVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRV 416

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD- 493
              +  ++ V  NAL            A+E +  +      VN  T   +L A  +  D 
Sbjct: 417 CKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDL 476

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L+ G  IH   + A ++ + FV+S++I MY +CG +  +   F  +   + + WNA++  
Sbjct: 477 LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSA 536

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITY---------LAVLTSC--CHAGLVR---EAR 599
            A +G   E   L  KM   G+  D+ ++         L +L      H+ +++   E+ 
Sbjct: 537 NAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESN 596

Query: 600 TY-LSCMSDLHG----------LIPQL-----EHYACIVDLLGRVGLLEGAKMTIDQM-- 641
            Y L+   D++G          ++PQ        +  ++  L R G  + A+    +M  
Sbjct: 597 DYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLD 656

Query: 642 -PIPPDAHIWQSLLSACTIYGNIDLGL 667
             + PD   + SLLSAC+  G +D GL
Sbjct: 657 LGLRPDHVTFVSLLSACSHGGLVDEGL 683



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 176/377 (46%), Gaps = 19/377 (5%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY K G +  A+ +FD +  ++  SWN++++G+   G++ +A+  FCHMLE  + P+ Y 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 380 MASILEAVSNSKSLKQ-AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            AS++ A   S  + + A QVH+H+IK G   D  + + L+  YG    + E   V  EI
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           ++ N V   +L     Y  C  E + +YR +       N +  + V+++C  + D   G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            +    +K+  D  + V +++I M+  C +IE+A   F  +       WN+++     +G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LE 616
              +    F++M     K D IT  A+L  C  A  +R  R        LHG++ +  LE
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGR-------GLHGMVVKSGLE 293

Query: 617 HYACIVDLL----GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
              C+ + L     + G  E A+    +M    D   W S++++    GN    L     
Sbjct: 294 SNVCVCNSLLSMYSQAGKSEDAEFVFHKMR-ERDLISWNSMMASHVDNGNYPRAL---EL 349

Query: 673 LLE-LQPDNESTYVLLS 688
           L+E LQ    + YV  +
Sbjct: 350 LIEMLQTRKATNYVTFT 366


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/761 (30%), Positives = 405/761 (53%), Gaps = 14/761 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G   D  + T+L+  +  +     A +   +   ++++++ AL+     + 
Sbjct: 51  QVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYG 110

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLV 116
           +    + ++ R+R +G+  +  T SS++  C SL ENE+    V G  +K G  + V + 
Sbjct: 111 EPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSL-ENELLGYQVLGHVIKYGLETNVSVA 169

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  +   G +  A   F    + D +++ +M+  Y+ NG   +S   F  M  +  E
Sbjct: 170 NSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKE 229

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +N  +L+ +L   G+  ++K G  IH   +K G+ S VC   +N ++ +Y   G+  DA 
Sbjct: 230 INSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVC--ASNTLITMYSDAGRCEDAE 287

Query: 234 KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  + E D++SW+  +A  A DG  ++A  L   + +     N  T  + L++     
Sbjct: 288 LVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPE 347

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               GK + A    VG  E V +GNAL+++Y K G + +A+ +F  +  +D V+WN++I 
Sbjct: 348 FATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIG 407

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFL 409
           G++++   ++AL  F  M E  +  N  T++++L A ++ +  L+  M +H+ II +GF 
Sbjct: 408 GHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQ 467

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D+ + + LIT Y KC  LN S  +   +  KNA   NA+ +   +     EAL+    +
Sbjct: 468 SDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEM 527

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +   V+  +FS  L A A +  LE+G+ +H LA+K   D + FV SA +DMY KCG I
Sbjct: 528 RRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEI 587

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           +D  R   +    S   WN +   +++HG + +    F++M   GVKPD +T++++L++C
Sbjct: 588 DDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSAC 647

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H G+V E   Y   M    G+  ++ H  CI+DLLGR G    A+  I +MP+ P  H+
Sbjct: 648 SHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHV 707

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W+SLL+AC  +GN++LG  A   LL+L P ++S YVL SN+ A+ G W DV K+R++M  
Sbjct: 708 WRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGL 767

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             + K+P  SW+ +      F  GD SH Q+ EIY +L +L
Sbjct: 768 NKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEEL 808



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 181/659 (27%), Positives = 305/659 (46%), Gaps = 46/659 (6%)

Query: 53  ISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLG 108
           +SG  R      +++ F+ +R  G++P     +SLV AC      L E   VHG  +K+G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
             S V++ +  +  Y   G    A   F++ +  + V++TA++  YV  GE      ++ 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 169 EMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
            MRS G+  N+ ++++V+     ++    G Q+ G  +K G  + V   + N++++++  
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVS--VANSLISMFGY 178

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINL 282
            G   +A  +F  + E D +SW+  IAA   +G+  E+   F  +     +IN  T+  +
Sbjct: 179 FGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTM 238

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L+  G    L+ G+ I +   K G+   V   N LI+MY   G+  DA  +F  ++ KD 
Sbjct: 239 LAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDM 298

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +SWNSM+A Y+++G    AL +   M       N  T  S L A S+ +   +   +H+ 
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHAL 358

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           +I  G   +  + + L+T Y K   + E+K+V   + K++ V  NAL      +    EA
Sbjct: 359 VIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEA 418

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQDIFVESAVID 521
           L+ ++ +      +N  T S VL AC A  D LE G  IH   +   +  D +V++++I 
Sbjct: 419 LKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLIT 478

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY KCG +  +   F ++   + + WNAMM   A HG   E      +M + GV  DE +
Sbjct: 479 MYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFS 538

Query: 582 Y---------------------LAVLTSCCHAGLVREAR--TYLSC--MSDLHGLIPQLE 616
           +                     LAV   C     V  A    Y  C  + D+  +IP+  
Sbjct: 539 FSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPI 598

Query: 617 H-----YACIVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLGL 667
           +     +  +     R G  E AK T  +M    + PD   + SLLSAC+  G ++ GL
Sbjct: 599 NRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGL 657



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 197/420 (46%), Gaps = 20/420 (4%)

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
           E +L  G Q+  F  KVG +  V +G +L+ +YG  G   DA  +F  +I+K+ VSW ++
Sbjct: 43  EWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTAL 102

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  Y + G  +  ++++  M    +  N  TM+S++    + ++     QV  H+IK G 
Sbjct: 103 MVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGL 162

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             + S+ + LI+ +G   ++ E+  V S +D+ + +  N++ +  +      E+L  +  
Sbjct: 163 ETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSW 222

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++   +E+N +T S +L  C ++ +L+ G+ IH L LK  ++ ++   + +I MY   G 
Sbjct: 223 MFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGR 282

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            EDA+  F+ +    +  WN+MM  YAQ G   +   L   M       + +T+ + L +
Sbjct: 283 CEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAA 342

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMP 642
           C       E +        LH L+  +  +        +V L  + GL+  AK     MP
Sbjct: 343 CSDPEFATEGKI-------LHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP 395

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL--ELQPDNESTYVLLSNLYASAGMWNDV 700
              D   W +L+         D  L A  KL+  E  P N   Y+ +SN+  +    ND+
Sbjct: 396 -KRDGVTWNALIGGHADSEEPDEALKA-FKLMREEGVPIN---YITISNVLGACLAPNDL 450


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/690 (31%), Positives = 375/690 (54%), Gaps = 9/690 (1%)

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +R +G+  + F    ++K     Q    VH + +  GF S V++ +  +  Y   G +  
Sbjct: 1   MRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 60

Query: 132 AEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
           A   F +     N V++  ++  YV N +   + +VF EM   G++  EF  + V+ A  
Sbjct: 61  ARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT 120

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            S ++  G Q+H   V++G+   V     NA++++YV+ G+   A  +F+++ + DVVSW
Sbjct: 121 GSRNIDAGRQVHAMVVRMGYEKDVFT--ANALVDMYVKMGRVDIASVIFEKMPDSDVVSW 178

Query: 248 SERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I+    +G +  A  L   ++ +    N + + ++L +  G      G+QI  F  K
Sbjct: 179 NALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK 238

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
                   IG  L+ MY K   ++DA  +FD++  +D + WN++I+G S  G  ++A  +
Sbjct: 239 ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSI 298

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  + +  L  N  T+A++L++ ++ ++     QVH+   K GF+ D  +++ LI +Y K
Sbjct: 299 FYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWK 358

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C+ L+++ RV  E    + + + ++ + L        A++L+  +     E +    S +
Sbjct: 359 CSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSL 418

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L ACA+++  EQGK +H   +K ++  D F  +A++  Y KCG+IEDA+ AF  +    +
Sbjct: 419 LNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 478

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             W+AM+ G AQHG       LF +M   G+ P+ IT  +VL +C HAGLV EA+ Y + 
Sbjct: 479 VSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNS 538

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           M ++ G+    EHY+C++DLLGR G L+ A   ++ MP   +A +W +LL A  ++ + +
Sbjct: 539 MKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPE 598

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           LG LA  KL  L+P+   T+VLL+N YAS+GMWN+V K+RK MK+  + KEP  SW+ V 
Sbjct: 599 LGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVK 658

Query: 725 GYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
              H F  GD SH  +KEIY +L +L + M
Sbjct: 659 DKVHTFIVGDKSHPMTKEIYSKLDELGDLM 688



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 228/449 (50%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++++++ G+  D   +  L+  + K      A        + D++++NALISG     
Sbjct: 130 QVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 189

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A++L  +++  GL P+ F  SS++KAC   G+      +HG  +K    S  Y+  
Sbjct: 190 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV 249

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G ++ YAK+  +  A   F      D + + A++ G    G  D++  +F  +R  GL +
Sbjct: 250 GLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGV 309

Query: 178 NEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +L AVL ++  ++      Q+H    K+GF+     H+ N +++ Y +C    DA++
Sbjct: 310 NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA--HVVNGLIDSYWKCSCLSDAIR 367

Query: 235 MFDEITEPDVVSWSERIAA--ACD-GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+E +  D+++ +  I A   CD G  A  LF ++     + + + + +LL++      
Sbjct: 368 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 427

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              GKQ+ A   K  FM     GNAL+  Y KCG + DA   F  L  +  VSW++MI G
Sbjct: 428 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 487

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            +++G   +AL++F  M++  + PN  TM S+L A +++  + +A + + + +K  F +D
Sbjct: 488 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGID 546

Query: 412 --DSMISCLITTYGKCNALNESKRVLSEI 438
             +   SC+I   G+   L+++  +++ +
Sbjct: 547 RTEEHYSCMIDLLGRAGKLDDAMELVNSM 575


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/753 (31%), Positives = 397/753 (52%), Gaps = 20/753 (2%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ- 75
           L+T L+  + K      A R       R + ++NALI        +G A+ ++  +R   
Sbjct: 95  LATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASE 154

Query: 76  ---GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              G  PD  T +S++KACG+  +      VHG+ +K G      + +  +  YAK G +
Sbjct: 155 PVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLL 214

Query: 130 VSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
            SA   F    D  +VA + + + G V NG F ++ ++F  M+S G  +N ++   VL  
Sbjct: 215 DSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQV 274

Query: 189 SFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
             ++ +   G ++H   +K G      N   NA++ +Y RCG    A+++F EI + D +
Sbjct: 275 CAELAQLNHGRELHAALLKCGT---EFNIQCNALLVMYARCGWVDSALRVFREIGDKDYI 331

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+  ++         EA   F ++  N F  +   +++LLS+VG    L  G+++ A+ 
Sbjct: 332 SWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYA 391

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K      + I N L+ MY KC  V  +  +FD +  KD VSW ++IA Y+++  +++A+
Sbjct: 392 VKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAI 451

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
             F    +  +  +   M SILEA S  KS+    QVHS+ I++G LLD  + + +I  Y
Sbjct: 452 GKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNG-LLDLILKNRIIDIY 510

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           G+C  +  +  +   +DKK+ V   ++ +         EA+ L+  +  +  + +     
Sbjct: 511 GECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALV 570

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CR 541
            +L A A ++ L +GK IH   ++ ++  +  V S+++DMY  CG++  A + F +  C+
Sbjct: 571 GILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK 630

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
           D +  W AM+     HG   +   +F +M + GV PD +++LA+L +C H+ LV E + Y
Sbjct: 631 DVVL-WTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFY 689

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           L  M   + L P  EHYAC+VDLLGR G  E A   I  MP+ P + +W +LL AC I+ 
Sbjct: 690 LDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHK 749

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N +L ++A  KLLEL+PDN   YVL+SN++A  G WN+V ++R +M E+ L K+P  SWI
Sbjct: 750 NHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWI 809

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            +G   H F A D SH  S+ I+ +L ++ E +
Sbjct: 810 EIGNTVHTFTARDHSHRDSQAIHLKLAEITEKL 842



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 246/521 (47%), Gaps = 28/521 (5%)

Query: 192 VKEGEQIHGFGVKVGFLS-GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           V EG Q+H   V  G L       L   ++ +Y +CG+  DA ++FD +    V SW+  
Sbjct: 71  VSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNAL 130

Query: 251 IAA---ACDGVEAFGLFKDLRFND----FQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           I A   +    EA G+++ +R ++       +  T+ ++L + G E   R G ++     
Sbjct: 131 IGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAV 190

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQAL 362
           K G      + NAL+ MY KCG ++ A  +F+++   +D  SWNS I+G  +NG F +AL
Sbjct: 191 KSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEAL 250

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC--LIT 420
           D+F  M       N YT   +L+  +    L    ++H+ ++K G   +   I C  L+ 
Sbjct: 251 DLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN---IQCNALLV 307

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y +C  ++ + RV  EI  K+ +  N++ S  V    +AEA++ +  +  +    + + 
Sbjct: 308 MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHAC 367

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
              +L A   +  L  G+ +H  A+K R D D+ + + ++DMY KC ++E + R F ++ 
Sbjct: 368 IVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMR 427

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC---HAGLVRE 597
                 W  ++  YAQ   Y E    F    K G+K D +   ++L +C       L+++
Sbjct: 428 IKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQ 487

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
             +Y +  + L  LI +      I+D+ G  G +  A + I +M    D   W S+++  
Sbjct: 488 VHSY-AIRNGLLDLILKNR----IIDIYGECGEVCYA-LNIFEMLDKKDIVTWTSMVNCF 541

Query: 658 TIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGM 696
              G +   +    K+L   +QPD   +  L+  L A AG+
Sbjct: 542 AENGLLHEAVALFGKMLNAGIQPD---SVALVGILGAIAGL 579



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 10/226 (4%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS---MISCLITTYGKCNALNESKRVLSEID 439
           +L+ V+  +++ +  Q+H+H + +G L DD    + + L+  YGKC  L ++ R+   + 
Sbjct: 61  VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGS----CREVNGSTFSIVLKACAAMTDLE 495
            +     NAL    + +    EA+ +YR +  S        +G T + VLKAC A  D  
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS--LAGWNAMMMG 553
            G  +H LA+K+  D+   V +A++ MY KCG ++ A R F  + RD   +A WN+ + G
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWM-RDGRDVASWNSAISG 239

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
             Q+G + E  +LF +M   G   +  T + VL  C     +   R
Sbjct: 240 CVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGR 285



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 9/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S  I+NG  LD IL   +I  + +  +   A         +DI+T+ ++++  A   
Sbjct: 487 QVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF ++   G++PD+     ++ A     SL + + +HG  ++  F     +VS
Sbjct: 546 LLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVS 605

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+  G +  A   F +    D V +TAM+     +G   ++  +F  M   G+  
Sbjct: 606 SLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSP 665

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S  A+L A   S  V EG+      V    L     H    +++L  R GQ  +A K
Sbjct: 666 DHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHY-ACVVDLLGRSGQTEEAYK 724

Query: 235 MFDEIT-EPDVVSWSERIAA 253
               +  EP  V W   + A
Sbjct: 725 FIKSMPLEPKSVVWCALLGA 744



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 20/194 (10%)

Query: 481 FSIVLKACAAMTDLEQGKAIHC--LALKARYDQDI-FVESAVIDMYCKCGTIEDAKRAFR 537
           +  VL   A    + +G+ +H   +A  A  D D  F+ + ++ MY KCG + DA R F 
Sbjct: 58  YGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFD 117

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK----FGVKPDEITYLAVLTSCCHAG 593
            +   ++  WNA++      G   E   ++  M       G  PD  T  +VL +C   G
Sbjct: 118 GMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEG 177

Query: 594 LVREARTYLSCMSDLHGLIPQ--LEHYACIVDLL----GRVGLLEGAKMTIDQMPIPPDA 647
             R       C S++HGL  +  L+    + + L     + GLL+ A    + M    D 
Sbjct: 178 DGR-------CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDV 230

Query: 648 HIWQSLLSACTIYG 661
             W S +S C   G
Sbjct: 231 ASWNSAISGCVQNG 244


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/765 (31%), Positives = 408/765 (53%), Gaps = 14/765 (1%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q+++ +I +    + + LST L+  + K      A +      ++ I T+NA+I      
Sbjct: 99  QVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 158

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   +L+L+  +R  G+  DA TF  ++KACG L++      VHG+ +K G+ S V++ 
Sbjct: 159 GEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVA 218

Query: 117 SGFIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  +  Y K  ++  A   F R     D V++ +M+  Y  NG+  ++  +F EM+   L
Sbjct: 219 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASL 278

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N ++  A L A  D   +K+G  IH   +K  +   V   + NA++ +Y R G+  +A
Sbjct: 279 APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV--FVANALIAMYARFGKMGEA 336

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F  + + D +SW+  ++    +G+  EA   + ++R    + +   +I+++++    
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 396

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                G QI A+  K G    + +GN+L+ MY K   +     IFD +  KD VSW ++I
Sbjct: 397 GNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 456

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           AG+++NG  ++AL++F  +    +  +   ++SIL A S  K +    ++HS+II+ G L
Sbjct: 457 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-L 515

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + ++  YG+C  ++ + R+   I+ K+ V   ++ S  V+     EALEL+  +
Sbjct: 516 SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM 575

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +  E +  +   +L A A+++ L++GK IH   ++  +  +  + S ++DMY +CGT+
Sbjct: 576 KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTL 635

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E ++  F  I    L  W +M+  Y  HGC     +LF +M    + PD I ++AVL +C
Sbjct: 636 EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 695

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E R +L  M   + L P  EHYAC+VDLLGR   LE A   +  M + P A +
Sbjct: 696 SHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEV 755

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC I+ N +LG +A  KLLE+ P+N   YVL+SN+Y++   W DV  +R  MK 
Sbjct: 756 WCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKA 815

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             L K PG SWI VG   H F A D SH QS EIY +L ++ E +
Sbjct: 816 SGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 860



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 195/405 (48%), Gaps = 11/405 (2%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSV----GGERILRAGKQIQA-FCYKVGFMEVVSI 313
           EAF    DL F +   +++++    SSV    G ++ L  G+Q+ A           V +
Sbjct: 58  EAFQSLTDL-FANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFL 116

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
              L+ MYGKCG + DA  +FD +  K   +WN+MI  Y  NG    +L+++  M    +
Sbjct: 117 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 176

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             +  T   IL+A    K  +   +VH   IK G++    + + ++  Y KCN LN +++
Sbjct: 177 PLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 236

Query: 434 VLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           +   + +K++ V  N++ S         EAL L+  +  +    N  TF   L+AC   +
Sbjct: 237 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 296

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            ++QG  IH   LK+ Y  ++FV +A+I MY + G + +A   F  +       WN+M+ 
Sbjct: 297 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 356

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG-LVREARTYLSCMSDLHGL 611
           G+ Q+G YHE    +++M   G KPD +  ++++ +   +G  +   + +   M +  GL
Sbjct: 357 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN--GL 414

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              L+    +VD+  +   ++      D+MP   D   W ++++ 
Sbjct: 415 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 458


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/765 (31%), Positives = 408/765 (53%), Gaps = 14/765 (1%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q+++ +I +    + + LST L+  + K      A +      ++ I T+NA+I      
Sbjct: 135 QVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 194

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   +L+L+  +R  G+  DA TF  ++KACG L++      VHG+ +K G+ S V++ 
Sbjct: 195 GEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVA 254

Query: 117 SGFIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  +  Y K  ++  A   F R     D V++ +M+  Y  NG+  ++  +F EM+   L
Sbjct: 255 NSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASL 314

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N ++  A L A  D   +K+G  IH   +K  +   V   + NA++ +Y R G+  +A
Sbjct: 315 APNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV--FVANALIAMYARFGKMGEA 372

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F  + + D +SW+  ++    +G+  EA   + ++R    + +   +I+++++    
Sbjct: 373 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 432

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                G QI A+  K G    + +GN+L+ MY K   +     IFD +  KD VSW ++I
Sbjct: 433 GNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 492

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           AG+++NG  ++AL++F  +    +  +   ++SIL A S  K +    ++HS+II+ G L
Sbjct: 493 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG-L 551

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + ++  YG+C  ++ + R+   I+ K+ V   ++ S  V+     EALEL+  +
Sbjct: 552 SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLM 611

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +  E +  +   +L A A+++ L++GK IH   ++  +  +  + S ++DMY +CGT+
Sbjct: 612 KETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTL 671

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E ++  F  I    L  W +M+  Y  HGC     +LF +M    + PD I ++AVL +C
Sbjct: 672 EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYAC 731

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E R +L  M   + L P  EHY C+VDLLGR   LE A   +  M + P A +
Sbjct: 732 SHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEV 791

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC I+ N +LG +A  KLLE+ P+N   YVL+SN+YA+   W DV ++R  MK 
Sbjct: 792 WCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKA 851

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             L K PG SWI VG   H F A D SH QS EIY +L ++ E +
Sbjct: 852 SGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKL 896



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 195/405 (48%), Gaps = 11/405 (2%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSV----GGERILRAGKQIQA-FCYKVGFMEVVSI 313
           EAF    DL F +   +++++    SSV    G ++ L  G+Q+ A           V +
Sbjct: 94  EAFQSLTDL-FANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFL 152

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
              L+ MYGKCG + DA  +FD +  K   +WN+MI  Y  NG    +L+++  M    +
Sbjct: 153 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 212

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             +  T   IL+A    K  +   +VH   IK G++    + + ++  Y KCN LN +++
Sbjct: 213 PLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 272

Query: 434 VLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           +   + +K++ V  N++ S         EAL L+  +  +    N  TF   L+AC   +
Sbjct: 273 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 332

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            ++QG  IH   LK+ Y  ++FV +A+I MY + G + +A   F  +       WN+M+ 
Sbjct: 333 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 392

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG-LVREARTYLSCMSDLHGL 611
           G+ Q+G YHE    +++M   G KPD +  ++++ +   +G  +   + +   M +  GL
Sbjct: 393 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN--GL 450

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              L+    +VD+  +   ++      D+MP   D   W ++++ 
Sbjct: 451 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTTIIAG 494


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 251/770 (32%), Positives = 398/770 (51%), Gaps = 22/770 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           +++ + K G   D +    ++   T       A   L         + +NA+ISG A+  
Sbjct: 119 LFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQ-- 176

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVY 114
           QSG       L+  +R  GL P   TF+S++ A  +     E   VH   ++ G  + V+
Sbjct: 177 QSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVF 236

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           + S  I  YAK G I  A + F DC    NV  + AM+ G V N    ++ ++F+ M+ L
Sbjct: 237 VGSSLINLYAKCGCIGDAILVF-DCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRL 295

Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           GLE +EF+  +VLGA   +     G Q+    +K    + +   + NA ++++ + G   
Sbjct: 296 GLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASL--FVANATLDMHSKFGAID 353

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA  +F+ IT  D VSW+  +       +  EA  + K +  +    +E +   ++++  
Sbjct: 354 DAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACS 413

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             R    GKQI     K       ++G++LI  Y K G V   R +   +     V  N 
Sbjct: 414 NIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNV 473

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +IAG  +N   ++A+D+F  +L   L P+ +T +SIL   +   S     QVH + +KSG
Sbjct: 474 LIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSG 533

Query: 408 FLLDDSMISC-LITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALEL 465
           FL DD+ +   L+ TY K     ++ ++L E+ D KN V   A+ S         ++L  
Sbjct: 534 FLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLS 593

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +       +  TF+ +LKAC+ MT L  GK IH L +K+ +       SA+IDMY K
Sbjct: 594 FWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSK 653

Query: 526 CGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           CG I  +  AF+++  +  +  WN+M++G+A++G   E   LF KM    +K DE+T+L 
Sbjct: 654 CGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLG 713

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL +C HAGL+ E R Y   MS ++G++P+++HYAC +DLLGR G L+ A+  I+++P  
Sbjct: 714 VLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFR 773

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           PD  IW + L+AC ++ + + G +A  +L+EL+P N STYVLLSN+YA+AG W +    R
Sbjct: 774 PDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAR 833

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + M+EK   K PG SWI VG  T  F   D +H  +  IY+ L  L   M
Sbjct: 834 EAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMM 883



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 169/688 (24%), Positives = 315/688 (45%), Gaps = 63/688 (9%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           +  D RR F  +      D + + ++ISG  R  +   A+ LF R+   G  PD  T  +
Sbjct: 81  RVGDARRVFGGI---SLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVA 137

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           +V A  +L   E    +  ++   S                                 VA
Sbjct: 138 VVCALTALGRLEDARTLLHRMPAPS-------------------------------STVA 166

Query: 147 YTAMVCGYVWNGEFDKSKEVF---VEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHG 200
           + A++ GY      +   EVF    +MR  GL     +  ++L A+ +     EG Q+H 
Sbjct: 167 WNAVISGYAQQSGIE--HEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHA 224

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG--- 257
             V+ G  + V   + ++++NLY +CG   DA+ +FD   E +VV W+  +         
Sbjct: 225 AAVRHGLDANV--FVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQ 282

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           VEA  +F  ++    + +E+T +++L +         G+Q+Q    K      + + NA 
Sbjct: 283 VEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANAT 342

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           + M+ K G ++DA+++F+ + +KD+VSWN+++ G + N    +A+ M   M    + P+ 
Sbjct: 343 LDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDE 402

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            + A+++ A SN ++ +   Q+H   +K     + ++ S LI  Y K   +   ++VL++
Sbjct: 403 VSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQ 462

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +D  + V  N L + LV  +   EA++L++ +     + +  TFS +L  C  +     G
Sbjct: 463 VDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIG 522

Query: 498 KAIHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYA 555
           K +HC  LK+ + + D  V  +++  Y K    EDA +   ++    +L  W A++ GYA
Sbjct: 523 KQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYA 582

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ- 614
           Q+G  ++    F +M  + V PDE+T+ ++L +C          T LS   ++HGLI + 
Sbjct: 583 QNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEM-------TALSDGKEIHGLIIKS 635

Query: 615 -----LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
                    + I+D+  + G +  +     ++    D  +W S++      G  D  LL 
Sbjct: 636 GFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLL 695

Query: 670 GSKLLELQ-PDNESTYVLLSNLYASAGM 696
             K+ + Q   +E T++ +    A AG+
Sbjct: 696 FQKMQDSQIKSDEVTFLGVLIACAHAGL 723



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 239/524 (45%), Gaps = 46/524 (8%)

Query: 76  GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+RPD F  ++ + AC   G+L   +  H    K G  S  +  +  +  YA+ G +  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
              F      D V + +M+ GY   G F ++  +F  M  +G   +  +  AV       
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAV------- 138

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERI 251
                             VC     A+  L    G+  DA  +   +  P   V+W+  I
Sbjct: 139 ------------------VC-----ALTAL----GRLEDARTLLHRMPAPSSTVAWNAVI 171

Query: 252 A--AACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           +  A   G+  E FGL+KD+R         T  ++LS+         G+Q+ A   + G 
Sbjct: 172 SGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGL 231

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              V +G++LI++Y KCG + DA  +FD    K+ V WN+M+ G   N +  +A+ MF +
Sbjct: 232 DANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLY 291

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKC 425
           M    L  + +T  S+L A ++  S     QV    IK+   +D S+   +  +  + K 
Sbjct: 292 MKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKN--CMDASLFVANATLDMHSKF 349

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
            A++++K + + I  K+ V  NAL   L +     EA+ + + +       +  +F+ V+
Sbjct: 350 GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            AC+ +   E GK IHCLA+K     +  V S++ID Y K G +E  ++   ++   S+ 
Sbjct: 410 NACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIV 469

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             N ++ G  Q+    E  +LF ++ + G+KP   T+ ++L+ C
Sbjct: 470 PRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGC 513



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 247/512 (48%), Gaps = 18/512 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q+++  +++G   +  + ++LI+ + K      A   +FD +  ++++ +NA+++GL R 
Sbjct: 221 QVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAI-LVFDCSGEKNVVMWNAMLNGLVRN 279

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLV 116
                A+++F  ++  GL  D FT+ S++ AC  L  +     V  V +K    + +++ 
Sbjct: 280 EYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVA 339

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ ++K G I  A+  F      D V++ A++ G   N E +++  +   M   G+ 
Sbjct: 340 NATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVT 399

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNH-LNNAIMNLYVRCGQKLDA 232
            +E S   V+ A  +++    G+QIH   +K    S   NH + +++++ Y + G     
Sbjct: 400 PDEVSFATVINACSNIRATETGKQIHCLAMKHSICS---NHAVGSSLIDFYSKHGDVESC 456

Query: 233 VKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+  ++    +V  +  IA         EA  LF+ +  +  + + +T  ++LS   G 
Sbjct: 457 RKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGL 516

Query: 290 RILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWNS 347
                GKQ+  +  K GF+ +  S+G +L+  Y K     DA  +  +    K+ V W +
Sbjct: 517 LSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTA 576

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +++GY++NG+  Q+L  F  M  + + P+  T ASIL+A S   +L    ++H  IIKSG
Sbjct: 577 IVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSG 636

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI-NALASVLVYASCHAEALELY 466
           F    +  S +I  Y KC  +  S     E+  K  + + N++           EAL L+
Sbjct: 637 FGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLF 696

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           + +  S  + +  TF  VL ACA    + +G+
Sbjct: 697 QKMQDSQIKSDEVTFLGVLIACAHAGLISEGR 728



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 210/450 (46%), Gaps = 13/450 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+  + IKN       ++   +   +KF     A         +D +++NAL+ GL    
Sbjct: 322 QVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNE 381

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A+ +   +   G+ PD  +F++++ AC +++  E    +H + +K    S   + S
Sbjct: 382 EDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGS 441

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G++ S             V    ++ G V N   D++ ++F ++   GL+ 
Sbjct: 442 SLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKP 501

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+ +++L     +     G+Q+H + +K GFL+   + +  +++  Y++     DA K
Sbjct: 502 SSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTS-VGVSLVGTYLKARMPEDANK 560

Query: 235 MFDEITE-PDVVSWSERIAA-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGER 290
           +  E+ +  ++V W+  ++  A +G     L  F  +R  D   +E T  ++L +     
Sbjct: 561 LLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMT 620

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
            L  GK+I     K GF    +  +A+I MY KCG +  +   F  L  K  ++ WNSMI
Sbjct: 621 ALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
            G+++NG+ ++AL +F  M +  +  +  T   +L A +++  + +       + K  G 
Sbjct: 681 LGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGI 740

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +      +C I   G+   L E++ V++E+
Sbjct: 741 MPRVDHYACFIDLLGRGGHLQEAQEVINEL 770



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 192/429 (44%), Gaps = 50/429 (11%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +++ +   LS+      L +GKQ      K G         AL++MY +CG+V DAR +F
Sbjct: 30  DQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVF 89

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +   D+V W SMI+GY   G F +A+ +F  M +    P+  T  +++          
Sbjct: 90  GGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV---------- 139

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA-VHINALASVL 453
                                 C +T  G+   L +++ +L  +   ++ V  NA+ S  
Sbjct: 140 ----------------------CALTALGR---LEDARTLLHRMPAPSSTVAWNAVISGY 174

Query: 454 VYAS-CHAEALELYRTI--WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
              S    E   LY+ +  WG       STF+ +L A A  T   +G+ +H  A++   D
Sbjct: 175 AQQSGIEHEVFGLYKDMRCWGLWP--TRSTFASMLSAAANATAFIEGRQVHAAAVRHGLD 232

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            ++FV S++I++Y KCG I DA   F      ++  WNAM+ G  ++    E   +F  M
Sbjct: 233 ANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYM 292

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            + G++ DE TY++VL +C H       R  + C++  + +   L      +D+  + G 
Sbjct: 293 KRLGLEADEFTYVSVLGACAHLDSHCLGRQ-VQCVTIKNCMDASLFVANATLDMHSKFGA 351

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID---LGLLAGSKLLELQPDNESTYVLL 687
           ++ AK T+  +    D   W +LL   T +   D   + +L G  L  + PD  S   ++
Sbjct: 352 IDDAK-TLFNLITYKDTVSWNALLVGLT-HNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409

Query: 688 ---SNLYAS 693
              SN+ A+
Sbjct: 410 NACSNIRAT 418



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 176/365 (48%), Gaps = 16/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L +K+    +  + ++LI  ++K  D     + L       I+  N LI+GL +  
Sbjct: 423 QIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNN 482

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGF-SSRVYLV 116
           +   A+ LF ++   GL+P +FTFSS++  C  L  + I   VH   LK GF +    + 
Sbjct: 483 REDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVG 542

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
              +  Y K+     A     +  D  N V +TA+V GY  NG   +S   F  MRS  +
Sbjct: 543 VSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDV 602

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E +  ++L A  +   + +G++IHG  +K GF  G      +AI+++Y +CG  + +
Sbjct: 603 HPDEVTFASILKACSEMTALSDGKEIHGLIIKSGF--GSYKTATSAIIDMYSKCGDIISS 660

Query: 233 VKMFDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            + F E+ ++ D+  W+  I   A +G   EA  LF+ ++ +  + +E T + +L +   
Sbjct: 661 FEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAH 720

Query: 289 ERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G+       KV G M  V      I + G+ G + +A+ + + L F+ D V W 
Sbjct: 721 AGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWA 780

Query: 347 SMIAG 351
           + +A 
Sbjct: 781 TYLAA 785


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/735 (31%), Positives = 395/735 (53%), Gaps = 29/735 (3%)

Query: 38  LFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQG----LRPDAFTFSSLVKAC- 91
           +FDT   RD+IT+NAL+S  A+   +     LF  ++Y      LRP   TF SL+ A  
Sbjct: 229 VFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATY 288

Query: 92  ---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
               SL   + +    LK G SS +Y+ S  +  +A+ G +  A+  +    + + V   
Sbjct: 289 LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLN 348

Query: 149 AMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDVKE-----GEQIHGFG 202
            ++ G V     + + E+F+  R S  + ++ + +     A F   E     G ++H   
Sbjct: 349 GLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHV 408

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA-----CDG 257
           ++ G +      ++N ++N+Y +CG    A ++F  +   D +SW+  I A      C+ 
Sbjct: 409 LRAGHIYRKIA-VSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEA 467

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
             A   +  +R N    + +  I+ LSS  G  +L AG+Q+     K G     S+ NAL
Sbjct: 468 --AMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNAL 525

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPN 376
           + MYG+CG++++   IF+ +   D VSWNS++    S      +++ +F +M++  L+PN
Sbjct: 526 VKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPN 585

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T  + L A++    L+   Q+HS ++K G   D+++ + L++ Y K   ++  +R+ S
Sbjct: 586 KVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFS 645

Query: 437 EID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            +  +++A+  N++ S  +Y     EA++    +  S + ++  TFSIVL ACA++  LE
Sbjct: 646 RMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALE 705

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           +G  +H   L++  + D+ VESA++DMY KCG I+ A + F  + + +   WN+M+ GYA
Sbjct: 706 RGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYA 765

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           +HG   +   +F +M + G  PD +T+++VL++C HAGLV     Y   M D +G++P++
Sbjct: 766 RHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMED-YGILPRI 824

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI---YGNIDLGLLAGSK 672
           EHY+C++DLLGR G L+  +  + +MP+ P+  IW+++L AC        IDLG  A   
Sbjct: 825 EHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRM 884

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           LLEL+P N   YVL S  +A+ G W D  K R  MK   + KE G SW+ +    H F A
Sbjct: 885 LLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIA 944

Query: 733 GDSSHSQSKEIYKEL 747
           GD SH  +KEIY++L
Sbjct: 945 GDRSHPNTKEIYEKL 959



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 178/729 (24%), Positives = 329/729 (45%), Gaps = 53/729 (7%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           ++K G   D  L+  L++ + K A    A R       R+ +++  LISG         A
Sbjct: 91  VVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDA 150

Query: 66  LKLFDRLRYQG--LRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVSG 118
             LF  +  +G   RP +FTF S+++AC     + +     VHG+  K  F+S   + + 
Sbjct: 151 FPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNA 210

Query: 119 FIENYAKS--GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR--SLG 174
            I  Y     G  + A+  F      D + + A++  Y   G+   +  +F  M+    G
Sbjct: 211 LISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSG 270

Query: 175 LELNEFS------LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           +EL          +TA   +S  +   +Q+    +K G  S +  ++ +A+++ + R G 
Sbjct: 271 IELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDL--YVGSALVSAFARHGM 328

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             +A  ++  + E + V+ +  IA       G  A  +F   R +   +N  T + LLS+
Sbjct: 329 LDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGAR-DSAAVNVDTYVVLLSA 387

Query: 286 VG----GERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +      E+ LR G+++ A   + G +   +++ N L++MY KCG ++ A  +F  +  +
Sbjct: 388 IAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEAR 447

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D +SWN++I    +NG+   A+  +C M + S+ P+ +   S L + +    L    Q+H
Sbjct: 448 DRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLH 507

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH- 459
              +K G  LD S+ + L+  YG+C  ++E   + + +   + V  N++  V+  +    
Sbjct: 508 CDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPI 567

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            E+++++  +  S    N  TF   L A   ++ LE GK IH + LK    +D  V++A+
Sbjct: 568 TESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNAL 627

Query: 520 IDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           +  Y K G ++  +R F ++   RD+++ WN+M+ GY  +G   E  +    M       
Sbjct: 628 MSCYAKSGDVDSCERLFSRMSGRRDAIS-WNSMISGYIYNGHLQEAMDCVCLMMHSEQMM 686

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLH--GLIPQLEH----YACIVDLLGRVGLL 631
           D  T+  VL +C     +           ++H  GL   LE      + +VD+  + G +
Sbjct: 687 DHCTFSIVLNACASVAALERGM-------EMHAFGLRSHLESDVVVESALVDMYSKCGRI 739

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES----TYVLL 687
           + A      M    +   W S++S    Y    LG  A     E+Q   ES    T+V +
Sbjct: 740 DYASKVFHSMS-QKNEFSWNSMISG---YARHGLGRKALEIFEEMQESGESPDHVTFVSV 795

Query: 688 SNLYASAGM 696
            +  + AG+
Sbjct: 796 LSACSHAGL 804



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/561 (24%), Positives = 260/561 (46%), Gaps = 31/561 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G   D  + + L+S F +      A       + R+ +T N LI+GL +  
Sbjct: 299 QLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQ 358

Query: 61  QSGPALKLFDRLRYQGLRPDAF----TFSSLVKACGS-------LQENEIVHGVCLKLGF 109
               A ++F      G R  A     T+  L+ A          L++   VH   L+ G 
Sbjct: 359 HGEAAAEIF-----MGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGH 413

Query: 110 SSRVYLVS-GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
             R   VS G +  YAK G I  A   F+     D +++  ++     NG  + +   + 
Sbjct: 414 IYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYC 473

Query: 169 EMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
            MR   +  + F+  + L +      +  G+Q+H   VK G    +   ++NA++ +Y  
Sbjct: 474 LMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLY--LDTSVSNALVKMYGE 531

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG----VEAFGLFKDLRFNDFQINEYTMIN 281
           CG+  +  ++F+ ++  DVVSW+  +           E+  +F ++  +    N+ T +N
Sbjct: 532 CGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVN 591

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FK 340
            L+++    +L  GKQI +   K G  E  ++ NAL+S Y K G V+    +F  +   +
Sbjct: 592 FLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRR 651

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D++SWNSMI+GY  NG   +A+D  C M+    + +  T + +L A ++  +L++ M++H
Sbjct: 652 DAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMH 711

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  ++S    D  + S L+  Y KC  ++ + +V   + +KN    N++ S         
Sbjct: 712 AFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGR 771

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SA 518
           +ALE++  +  S    +  TF  VL AC+    +E+G  +    L   Y     +E  S 
Sbjct: 772 KALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERG--LDYFELMEDYGILPRIEHYSC 829

Query: 519 VIDMYCKCGTIEDAKRAFRKI 539
           VID+  + G ++  +   +++
Sbjct: 830 VIDLLGRAGELDKIQEYMKRM 850



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/597 (22%), Positives = 276/597 (46%), Gaps = 43/597 (7%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           E +H   +K G +  ++L +  + +YAK   + +A   F      + V++T ++ G+V +
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 158 GEFDKSKEVFVEM--RSLGLELNEFSLTAVLGASFDVKEGE-----QIHGFGVKVGFLSG 210
           G  + +  +F  M     G     F+  +VL A  D          Q+HG   K  F S 
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 211 --VCNHLNNAIMNLYVRC--GQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGL 263
             VC    NA++++Y  C  G  + A ++FD     D+++W+  +   A   D +  F L
Sbjct: 205 TTVC----NALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTL 260

Query: 264 FKDLRFNDFQI----NEYTMINLLSSVGGERI-LRAGKQIQAFCYKVGFMEVVSIGNALI 318
           F+ ++++D  I     E+T  +L+++       L    Q+     K G    + +G+AL+
Sbjct: 261 FRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALV 320

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           S + + G +++A+ I+  L  +++V+ N +IAG  +      A ++F    + + + N  
Sbjct: 321 SAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV-NVD 379

Query: 379 TMASILEAVSN----SKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKR 433
           T   +L A++      + L++  +VH+H++++G +     +S  L+  Y KC A++++ R
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACR 439

Query: 434 VLSEIDKKNAVHINALASVL-VYASCHAEALE--LYRTIWGSCREVNGSTFSIV--LKAC 488
           V   ++ ++ +  N + + L     C A  +   L R        +  S F+ +  L +C
Sbjct: 440 VFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ-----NSIGPSNFAAISGLSSC 494

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +  L  G+ +HC A+K     D  V +A++ MY +CG + +    F  +    +  WN
Sbjct: 495 AGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWN 554

Query: 549 AMM--MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           ++M  M  +Q      V  +F+ M K G+ P+++T++  L +     ++   +   S M 
Sbjct: 555 SIMGVMASSQAPITESV-QVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVML 613

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
             HG+         ++    + G ++  +    +M    DA  W S++S     G++
Sbjct: 614 K-HGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHL 669


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/752 (31%), Positives = 406/752 (53%), Gaps = 29/752 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I+S +IK G   D  L+  L+S + K     RA R LFD   NRD++++  ++S   +  
Sbjct: 36  IHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRA-RHLFDEMPNRDVVSWTTILSSHTKTK 94

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
               AL+LFD +   G  P+ FT SS +++C +L E E    +H   +KLG     ++ +
Sbjct: 95  HHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGT 154

Query: 118 GFIENYAKSG----EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
             +E Y K G    E        +D  D+  V++T M+   V NG++ ++ E++V+M   
Sbjct: 155 SLVEFYTKCGCCSVEAWKLLSLVKDGGDV--VSWTTMLSSLVENGKWGEAFEIYVKMIES 212

Query: 174 GLELNEFSLTAVLGA--SF-DVKEGEQIHG----FGVKVGFLSGVCNHLNNAIMNLYVRC 226
           G+  NEF+   +LGA  SF  +  G+ +H     FG ++  +      L  A++++Y +C
Sbjct: 213 GVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV------LKTAVVDMYSKC 266

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLL 283
            + +DA+K+ +   E DV  W+  I+     +   EA  +F+D+  +    N +T  +LL
Sbjct: 267 RRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLL 326

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN-DARSIFDYLIFKDS 342
           ++      L  G+Q  +    VG  + + IGNAL+ MY KC  +  +A  +F  +   + 
Sbjct: 327 NASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNV 386

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           + W S+IAG++E      +  +F  M    + PN +TM++IL A S ++SL   M +H H
Sbjct: 387 MCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGH 445

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           IIK+   +D ++ + L+ TY     ++E+  V+  ++ ++++    LA+ L     H  A
Sbjct: 446 IIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMA 505

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L++   +     +++  + +  L A A +  +E GK +HC ++K+ + +   V ++++ +
Sbjct: 506 LKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHL 565

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG+I DA RAF+ I       WN ++ G++ +G      + F+ M   GVKPD IT 
Sbjct: 566 YSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITL 625

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           L+++++C H GL+     Y   M   + + P+L+HY C+VDLLGR G LE A   I++M 
Sbjct: 626 LSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMS 685

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             PD+ I ++LL+AC ++GN+ LG     + LEL P + + Y+LL+NLY +AG+ +   K
Sbjct: 686 FKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEK 745

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            R+ M+E+ L + PG  W+ +    HHF AG+
Sbjct: 746 TRRLMRERGLRRSPGQCWMEIRSRVHHFSAGE 777



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 265/551 (48%), Gaps = 14/551 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFR-RAFRFLFDTQN-RDIITYNALISGLAR 58
           QI+   +K G  ++  + T+L+  +TK       A++ L   ++  D++++  ++S L  
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             + G A +++ ++   G+ P+ FTF  L+ A  S   L   +++H   +  G    + L
Sbjct: 196 NGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVL 255

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  ++ Y+K   +V A        + D   +T ++ G+  N +  ++  VF +M   GL
Sbjct: 256 KTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGL 315

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ-KLD 231
             N F+ +++L AS     +  GEQ H   + VG    +  ++ NA++++Y++C     +
Sbjct: 316 LPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDL--YIGNALVDMYMKCSHITTN 373

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           AVK+F EIT P+V+ W+  IA   +    ++F LF +++    + N +TM  +L +    
Sbjct: 374 AVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKT 433

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R L     +     K      +++ NAL+  Y   G +++A S+   +  +DS+++  + 
Sbjct: 434 RSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLA 493

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A  ++ G    AL +  HM    +  + +++AS L A +   +++   Q+H + +KSGF 
Sbjct: 494 ARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQ 553

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
              S+ + L+  Y KC +++++ R   +I + +A   N L S   +    + AL  +  +
Sbjct: 554 RCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDM 613

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
             +  + +  T   ++ AC+    LE G +  H +  +      +     ++D+  + G 
Sbjct: 614 RLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGR 673

Query: 529 IEDAKRAFRKI 539
           +E+A     K+
Sbjct: 674 LEEAMGVIEKM 684



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 158/635 (24%), Positives = 281/635 (44%), Gaps = 27/635 (4%)

Query: 75  QGLRPDAFTFSSLVKAC---------GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           Q L    F+ S   + C          SL+E   +H   +KLG    +YL +  +  YAK
Sbjct: 2   QMLCTKTFSLSRFQETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAK 61

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
           +  +  A   F +  + D V++T ++  +        + ++F  M   G   NEF+L++ 
Sbjct: 62  TFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSA 121

Query: 186 LGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG-QKLDAVKMFDEITE 241
           L + F + E   G QIH   VK+G    +   +  +++  Y +CG   ++A K+   + +
Sbjct: 122 LRSCFALGEFERGMQIHCSAVKLGL--EMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKD 179

Query: 242 -PDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             DVVSW+  +++  +     EAF ++  +  +    NE+T + LL +V     L  GK 
Sbjct: 180 GGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKL 239

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + A     G    + +  A++ MY KC ++ DA  + +     D   W ++I+G+++N  
Sbjct: 240 LHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQ 299

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +A+ +F  M    L+PN +T +S+L A S+  SL    Q HS +I  G   D  + + 
Sbjct: 300 VREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNA 359

Query: 418 LITTYGKCNALNESK-RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
           L+  Y KC+ +  +  +V  EI   N +   +L +         ++ +L+  +  +    
Sbjct: 360 LVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLE-DSFQLFAEMQAAGVRP 418

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N  T S +L AC+    L     +H   +K + D DI V +A++D Y   G I++A    
Sbjct: 419 NSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVI 478

Query: 537 RKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
             +  RDS+  +  +     Q G +     +   M   G+K DE +  + L++    G +
Sbjct: 479 GTMNLRDSIT-YTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTM 537

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            E    L C S   G          +V L  + G +  A      +   PDA  W  L+S
Sbjct: 538 -ETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDIS-EPDAFSWNGLIS 595

Query: 656 ACTIYGNID--LGLLAGSKLLELQPDNESTYVLLS 688
             +  G I   L      +L  ++PD+ +   L+S
Sbjct: 596 GFSWNGLISHALSTFDDMRLAGVKPDSITLLSLIS 630


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/699 (32%), Positives = 373/699 (53%), Gaps = 16/699 (2%)

Query: 65  ALKLFDRLRYQGLRP-DAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFI 120
           ALK FD  +     P  + T++ L+ AC SL+  E    +H   L   +   + L +  +
Sbjct: 81  ALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
             Y K G +  A   F D + L NV ++T+M+ GY   GE D +  ++V+M   G   + 
Sbjct: 141 SMYGKCGSLKEARNMF-DSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199

Query: 180 FSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+  +++ +     D K   Q+H   +K  F + +     NA++++Y +  Q  DA+ +F
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQ--NALISMYTKFSQMADAINVF 257

Query: 237 DEITEPDVVSWSERIAAACD---GVEAFGLFKD-LRFNDFQINEYTMINLLSSVGGERIL 292
             I   D++SW   IA        +EA   F++ L  + +Q NE+   +  S+       
Sbjct: 258 SRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP 317

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+QI   C K G    +  G +L  MY KCG +  AR++F ++   D V+WN++IAG+
Sbjct: 318 DCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGF 377

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +      ++   F  M    L+PN  T+ S+L A S    L   +QVHS+I+K GF LD 
Sbjct: 378 ASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDI 437

Query: 413 SMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            + + L++ Y KC+ LN++ +V  +I +K + V  N L +  +  +   E L L + ++ 
Sbjct: 438 PVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA 497

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  T + VL +   +   E G  IHC  +K+  + DI V +A+I+MY KCG++E 
Sbjct: 498 SRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLEC 557

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A++ F  I    +  W+++++GYAQ GC  E   LF  M   GVKP+EIT++ +LT+C H
Sbjct: 558 ARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSH 617

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G+V E       M + + + P  EH +C+VDLL R G L+ A+  I QMP  PD  +W+
Sbjct: 618 IGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWK 677

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL+AC ++GN+++G  A   +L++ P N +  V+L N++AS+G W D  +LR  M+   
Sbjct: 678 TLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMD 737

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + K PG SWI +    H F A D+ H +  +IY  L +L
Sbjct: 738 VGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEEL 776



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 282/577 (48%), Gaps = 27/577 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+  ++   +  D IL   ++S + K    + A R +FD+   ++++++ ++ISG +R+
Sbjct: 119 KIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEA-RNMFDSMPLKNVVSWTSMISGYSRY 177

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   A+ L+ ++   G  PD FTF S+VK+C  L + ++   +H   LK  F + +   
Sbjct: 178 GEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQ 237

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
           +  I  Y K  ++  A   F   +  D +++ +M+ G+   G   ++   F EM S  + 
Sbjct: 238 NALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVY 297

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NEF   +   A   + E   G QIHG  +K G  S +      ++ ++Y +CG    A
Sbjct: 298 QPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL--FAGCSLCDMYAKCGFLESA 355

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F  I +PD+V+W+  I   A+  +  E+   F  +R      N+ T+++LL +    
Sbjct: 356 RTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEP 415

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
            +L  G Q+ ++  K+GF   + + N+L+SMY KC  +NDA  +F+ +  K D VSWN++
Sbjct: 416 VMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTL 475

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +    +     + L +   M    + P+  T+ ++L +     S +   Q+H  I+KSG 
Sbjct: 476 LTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL 535

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            LD S+ + LI  Y KC +L  ++++   I   + +  ++L      A C  EA EL+RT
Sbjct: 536 NLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRT 595

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDM 522
           + G   + N  TF  +L AC+ +  +E+G     L L     +D  +       S ++D+
Sbjct: 596 MRGLGVKPNEITFVGILTACSHIGMVEEG-----LKLYRTMQEDYRISPTKEHCSCMVDL 650

Query: 523 YCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
             + G ++ A+   R++     +  W  ++     HG
Sbjct: 651 LARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHG 687


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/689 (32%), Positives = 369/689 (53%), Gaps = 13/689 (1%)

Query: 77  LRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           L P   +F  L+  C     LQ+ + +H   L+ G  S VYL +  +  YAK G IV A+
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKS--KEVFVEMRSLGLELNEFSLTAVLGASFD 191
           + F    + D V++  ++ GY   G    S   E+F  MR+     N  + + V  A+  
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
             E   G Q H   +K      V   + ++++N+Y + G  LDA K+FD I E + VSW+
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDV--FVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWA 183

Query: 249 ERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I   A      EA+ LF  +R  +   +++   ++LS++    ++  GKQI     K 
Sbjct: 184 TIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN 243

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G + + S+GNAL++MYGKCG ++DA   F+    KD ++W++MI GY++ G  ++AL++F
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
            +M      P+ +T   ++ A S+  +L++  Q+H + +K+G+      ++ L+  Y KC
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC 363

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
            +L ++++    + + + V   ++ S       +  AL LY  +       +  T + VL
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVL 423

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           +AC+++  LEQGK IH   +K  +  ++ + SA+  MY KCG++ED    FR++    + 
Sbjct: 424 RACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIM 483

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM+ G +Q+G   +   LF ++     KPD +T++ VL++C H GLV   + Y   M
Sbjct: 484 TWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMM 543

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
            D  G++P++EHYAC+VD+L R G L   K  I+   I     +W+ LL AC  Y N +L
Sbjct: 544 LDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYEL 603

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G  AG KL+EL     S Y+LLS++Y + G  +DV ++R+ MK + + KEPG SWI +  
Sbjct: 604 GAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKS 663

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             H F  GD  H Q  +I  EL +L +HM
Sbjct: 664 QVHVFVVGDQIHPQIVKICSELRRLRDHM 692



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 174/605 (28%), Positives = 290/605 (47%), Gaps = 36/605 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ L++ G      L+ +L++ + K     +A        N+D++++N LI+G ++   
Sbjct: 32  IHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGT 91

Query: 62  SGPA--LKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLV 116
            G +  ++LF R+R +   P+  TFS +  A  S  E       H + +K      V++ 
Sbjct: 92  VGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVG 151

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I  Y K G ++ A   F    + + V++  ++ GY       ++ E+F  MR     
Sbjct: 152 SSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGA 211

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F  T+VL A      V  G+QIH   +K G LS     + NA++ +Y +CG   DA+
Sbjct: 212 HDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS--IASVGNALVTMYGKCGCLDDAL 269

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K F+   + D ++WS  I   A A D  EA  LF ++  N  + +E+T + ++++     
Sbjct: 270 KTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIG 329

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQI  +  K G+   +    AL+ MY KCG + DAR  FDYL   D V W SMI+
Sbjct: 330 ALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMIS 389

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY++NG    AL ++C M    ++P+  TMAS+L A S+  +L+Q  Q+H+  IK GF L
Sbjct: 390 GYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSL 449

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S L T Y KC +L +   V   +  ++ +  NA+ S L       +ALEL+  + 
Sbjct: 450 EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELR 509

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK----------------------AR 508
               + +  TF  VL AC+ M  +E+GK    + L                         
Sbjct: 510 HGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKL 569

Query: 509 YDQDIFVESAVIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           ++   F+ESA ID   C    +  A R +R     + AG   M +G  +   Y  +S+++
Sbjct: 570 HETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIY 629

Query: 568 NKMSK 572
             + +
Sbjct: 630 TALGR 634



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 238/485 (49%), Gaps = 33/485 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q ++L IK  +  D  + ++LI+ + K      A R +FDT   R+ +++  +ISG A  
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDA-RKVFDTIPERNTVSWATIISGYAME 192

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
             +  A +LF  +R +    D F ++S++ A      +   + +H + LK G  S   + 
Sbjct: 193 RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 252

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y K G +  A   F    D D++ ++AM+ GY   G+  ++  +F  M   G +
Sbjct: 253 NALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +EF+   V+ A  D+   +EG+QIHG+ +K G+   +  +   A++++Y +CG  +DA 
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI--YFMTALVDMYAKCGSLVDAR 370

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K FD + EPD+V W+  I+      E   A  L+  ++      +E TM ++L +     
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQI A   K GF   V IG+AL +MY KCG + D   +F  +  +D ++WN+MI+
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
           G S+NG   +AL++F  +   +  P+  T  ++L A S+   +++       ++   G +
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                 +C++    +   L+E+K  +              ++ + +  C      L+R +
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIE-------------SATIDHGMC------LWRIL 591

Query: 470 WGSCR 474
            G+CR
Sbjct: 592 LGACR 596



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 4/288 (1%)

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
           + L P   +   +L   +  K L++   +H+ ++++G      + + L+  Y KC ++ +
Sbjct: 4   YLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVK 63

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           +K V   I  K+ V  N L +         ++  +EL++ +       NG TFS V  A 
Sbjct: 64  AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAA 123

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           ++  +   G   H LA+K     D+FV S++I+MYCK G + DA++ F  I   +   W 
Sbjct: 124 SSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWA 183

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            ++ GYA      E   LF  M +     D+  Y +VL++     LV   +  + C++  
Sbjct: 184 TIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQ-IHCLALK 242

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           +GL+        +V + G+ G L+ A  T  ++    D   W ++++ 
Sbjct: 243 NGLLSIASVGNALVTMYGKCGCLDDALKTF-ELSGDKDDITWSAMITG 289


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/699 (32%), Positives = 373/699 (53%), Gaps = 16/699 (2%)

Query: 65  ALKLFDRLRYQGLRP-DAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFI 120
           ALK FD  +     P  + T++ L+ AC SL+  E    +H   L   +   + L +  +
Sbjct: 81  ALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
             Y K G +  A   F D + L NV ++T+M+ GY   GE D +  ++V+M   G   + 
Sbjct: 141 SMYGKCGSLKEARNMF-DSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDH 199

Query: 180 FSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+  +++ +     D K   Q+H   +K  F + +     NA++++Y +  Q  DA+ +F
Sbjct: 200 FTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQ--NALISMYTKFSQMADAINVF 257

Query: 237 DEITEPDVVSWSERIAAACD---GVEAFGLFKD-LRFNDFQINEYTMINLLSSVGGERIL 292
             I   D++SW   IA        +EA   F++ L  + +Q NE+   +  S+       
Sbjct: 258 SRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP 317

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+QI   C K G    +  G +L  MY KCG +  AR++F ++   D V+WN++IAG+
Sbjct: 318 DCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGF 377

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +      ++   F  M    L+PN  T+ S+L A S    L   +QVHS+I+K GF LD 
Sbjct: 378 ASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDI 437

Query: 413 SMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            + + L++ Y KC+ LN++ +V  +I +K + V  N L +  +  +   E L L + ++ 
Sbjct: 438 PVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA 497

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  T + VL +   +   E G  IHC  +K+  + DI V +A+I+MY KCG++E 
Sbjct: 498 SRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLEC 557

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A++ F  I    +  W+++++GYAQ GC  E   LF  M   GVKP+EIT++ +LT+C H
Sbjct: 558 ARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSH 617

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G+V E       M + + + P  EH +C+VDLL R G L+ A+  I QMP  PD  +W+
Sbjct: 618 IGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWK 677

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL+AC ++GN+++G  A   +L++ P N +  V+L N++AS+G W D  +LR  M+   
Sbjct: 678 TLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMD 737

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + K PG SWI +    H F A D+ H +  +IY  L +L
Sbjct: 738 VGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEEL 776



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/577 (25%), Positives = 282/577 (48%), Gaps = 27/577 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+  ++   +  D IL   ++S + K    + A R +FD+   ++++++ ++ISG +R+
Sbjct: 119 KIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEA-RNMFDSMPLKNVVSWTSMISGYSRY 177

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   A+ L+ ++   G  PD FTF S+VK+C  L + ++   +H   LK  F + +   
Sbjct: 178 GEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQ 237

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
           +  I  Y K  ++  A   F   +  D +++ +M+ G+   G   ++   F EM S  + 
Sbjct: 238 NALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVY 297

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NEF   +   A   + E   G QIHG  +K G  S +      ++ ++Y +CG    A
Sbjct: 298 QPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL--FAGCSLCDMYAKCGFLESA 355

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F  I +PD+V+W+  I   A+  +  E+   F  +R      N+ T+++LL +    
Sbjct: 356 RTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEP 415

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
            +L  G Q+ ++  K+GF   + + N+L+SMY KC  +NDA  +F+ +  K D VSWN++
Sbjct: 416 VMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTL 475

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +    +     + L +   M    + P+  T+ ++L +     S +   Q+H  I+KSG 
Sbjct: 476 LTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL 535

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            LD S+ + LI  Y KC +L  ++++   I   + +  ++L      A C  EA EL+RT
Sbjct: 536 NLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRT 595

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDM 522
           + G   + N  TF  +L AC+ +  +E+G     L L     +D  +       S ++D+
Sbjct: 596 MRGLGVKPNEITFVGILTACSHIGMVEEG-----LKLYRTMQEDYRISPTKEHCSCMVDL 650

Query: 523 YCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
             + G ++ A+   +++     +  W  ++     HG
Sbjct: 651 LARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHG 687


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 224/724 (30%), Positives = 374/724 (51%), Gaps = 53/724 (7%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD    RD++++N+LISG          + +F ++   G   D  TF+ ++K+C SL++
Sbjct: 130 LFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLED 189

Query: 97  NE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           +     +HG+ +K+GF   V   S  ++ YAK  ++  +   F    + + V+++A++ G
Sbjct: 190 HGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAG 249

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSG 210
            V N +     E+F EM+  G+ +++ +  +V  +      ++ G Q+HG  +K  F + 
Sbjct: 250 CVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTD 309

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFN 270
           V   +  A +++Y++C    DA K+F+ +   ++ S++  I       +  GL       
Sbjct: 310 VV--IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGL------- 360

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
               +E ++     +    +    G Q+     K      + + NA++ MYGKCG + +A
Sbjct: 361 ----DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEA 416

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F+ ++ +D+VSWN++IA + +NG   + L +F                         
Sbjct: 417 CLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF------------------------- 451

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
                   +H+ IIKS   LD  +   LI  Y KC  + +++++   + ++  V  NA+ 
Sbjct: 452 --------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 503

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S         EA + +  +     + +  T++ +L  CA +  +E GK IH   +K    
Sbjct: 504 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 563

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            D ++ S ++DMY KCG ++D +  F K        WNAM+ GYAQHG   E   +F  M
Sbjct: 564 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 623

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
               VKP+  T+LAVL +C H GLV +   Y   M   +GL PQLEHY+C+VD++GR G 
Sbjct: 624 QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQ 683

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           +  A   I+ MP   DA IW++LLS C I+GN+++   A   +L+L+P++ + YVLLSN+
Sbjct: 684 VSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNI 743

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           YA+AGMWN+V KLRK M+   L KEPG SWI +    H F  GD +H +SKEIY+ L  L
Sbjct: 744 YANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVL 803

Query: 751 YEHM 754
            + M
Sbjct: 804 TDEM 807



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 250/539 (46%), Gaps = 53/539 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L +K G   D +  + L+  + K      + +F      ++ ++++A+I+G  +  
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQND 254

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                L+LF  ++  G+     TF+S+ ++C  L    +   +HG  LK  F + V + +
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   +  A+  F    + +  +Y A++ GY  +   DK           GL L
Sbjct: 315 ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS---DK-----------GLGL 360

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+    A   +K   EG Q+HG  +K    S +C  + NAI+++Y +CG  ++A  
Sbjct: 361 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNIC--VANAILDMYGKCGALVEACL 418

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           +F+E+   D VSW+  IAA                ++   NE   ++L       RI+++
Sbjct: 419 VFEEMVSRDAVSWNAIIAA----------------HEQNGNEEKTLSLFIH---NRIIKS 459

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
              + +F           +G ALI MY KCG +  A  + D L  +  VSWN++I+G+S 
Sbjct: 460 RLGLDSF-----------VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 508

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
                +A   F  MLE  + P+ +T A+IL+  +N  +++   Q+H+ IIK     D  +
Sbjct: 509 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYI 568

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S L+  Y KC  + + + +  +   ++ V  NA+           EAL+++  +     
Sbjct: 569 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 628

Query: 475 EVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
           + N +TF  VL+AC  M  +E+G    H +      D  +   S V+D+  + G +  A
Sbjct: 629 KPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 687



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 234/535 (43%), Gaps = 80/535 (14%)

Query: 264 FKDLRFNDFQ------INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           FK L  + F         + T  ++       + L  GKQ  A      F   V + N L
Sbjct: 24  FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCL 83

Query: 318 ISMYGKC-------------------------------GQVNDARSIFDYLIFKDSVSWN 346
           I MY KC                               G +  A+ +FD +  +D VSWN
Sbjct: 84  IQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWN 143

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I+GY  NG   + +D+F  M     + +  T A +L++ S+ +     +Q+H   +K 
Sbjct: 144 SLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM 203

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  D    S L+  Y KC  L+ S +    + +KN V  +A+ +  V        LEL+
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           + +  +   V+ STF+ V ++CA ++ L  G  +H  ALK  +  D+ + +A +DMY KC
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
             + DA++ F  +   +L  +NA+++GYA+              S  G+  DE++     
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYAR--------------SDKGLGLDEVSLSGAF 369

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYAC----IVDLLGRVGLLEGAKMTIDQ 640
            +C    +++     L     +HGL  +   +   C    I+D+ G+ G L  A +  ++
Sbjct: 370 RAC---AVIKGDLEGLQ----VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 422

Query: 641 MPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNES-TYVLLSNLYASAGMW 697
           M +  DA  W ++++A    GN +  L L   +++++ +   +S   + L ++Y+  GM 
Sbjct: 423 M-VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMM 481

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
               KL   + E+ +      SW       +   +G S   QS+E  K   K+ E
Sbjct: 482 EKAEKLHDRLAEQTVV-----SW-------NAIISGFSLQKQSEEAQKTFSKMLE 524



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 228/495 (46%), Gaps = 34/495 (6%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQ 273
           NA++  Y   G    A K+FD + E DVVSW+  I+      D  +   +F  +      
Sbjct: 112 NAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTV 171

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T   +L S         G QI     K+GF   V  G+AL+ MY KC +++ +   
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  K+ VSW+++IAG  +N      L++F  M +  +  +  T AS+  + +   +L
Sbjct: 232 FHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSAL 291

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +   Q+H H +K+ F  D  + +  +  Y KCN L++++++ + +   N    NA+  ++
Sbjct: 292 RLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAI--IV 349

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
            YA          R+  G    ++  + S   +ACA +    +G  +H L++K+    +I
Sbjct: 350 GYA----------RSDKG--LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNI 397

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF--NKMS 571
            V +A++DMY KCG + +A   F ++       WNA++  + Q+G   +  +LF  N++ 
Sbjct: 398 CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRII 457

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACIVDLLGRVG 629
           K  +  D    +A++      G++ +A         LH  + +  +  +  I+       
Sbjct: 458 KSRLGLDSFVGIALIDMYSKCGMMEKAEK-------LHDRLAEQTVVSWNAIISGFSLQK 510

Query: 630 LLEGAKMTID---QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL--ELQPDNESTY 684
             E A+ T     +M + PD   + ++L  C     ++LG    ++++  ELQ D   + 
Sbjct: 511 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 570

Query: 685 VLLSNLYASAGMWND 699
            L+ ++Y+  G   D
Sbjct: 571 TLV-DMYSKCGNMQD 584


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/765 (31%), Positives = 389/765 (50%), Gaps = 20/765 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++ LI N    D      ++  +     F+D  + F +  D +   I  +N++IS   
Sbjct: 56  QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-YRLDLRRSSIRPWNSIISSFV 114

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
           R      AL  + ++   G+ PD  TF  LVKAC +L+     + +      LG     +
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF 174

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  I+ Y + G+I      F   L  D V +  M+ GY   G  D   + F  MR   
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVC--NHLNNAIMNLYVRCGQK 229
           +  N  +   VL    +   +  G Q+HG  V    +SGV     + N+++++Y +CG+ 
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV----VSGVDFEGSIKNSLLSMYSKCGRF 290

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K+F  ++  D V+W+  I+         E+   F ++  +    +  T  +LL SV
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L   KQI  +  +      + + +ALI  Y KC  V+ A++IF      D V + 
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI+GY  NG +  +L+MF  +++  + PN  T+ SIL  +    +LK   ++H  IIK 
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF    ++   +I  Y KC  +N +  +   + K++ V  N++ +    +   + A++++
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           R +  S    +  + S  L ACA +     GKAIH   +K     D++ ES +IDMY KC
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAV 585
           G ++ A   F+ +   ++  WN+++     HG   +   LF++M  K G++PD+IT+L +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           ++SCCH G V E   +   M++ +G+ PQ EHYAC+VDL GR G L  A  T+  MP PP
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           DA +W +LL AC ++ N++L  +A SKL++L P N   YVL+SN +A+A  W  V K+R 
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 770

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            MKE+ + K PGYSWI +   TH F +GD +H +S  IY  L  L
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 144/311 (46%), Gaps = 6/311 (1%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LL +     +LR GKQ+ AF               ++ MY  CG  +D   +F  L  + 
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 342 SV--SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           S    WNS+I+ +  NG  NQAL  +  ML F + P+  T   +++A    K+ K    +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
              +   G   ++ + S LI  Y +   ++   ++   + +K+ V  N + +   YA C 
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN--GYAKCG 218

Query: 460 A--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
           A    ++ +  +       N  TF  VL  CA+   ++ G  +H L + +  D +  +++
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           +++ MY KCG  +DA + FR + R     WN M+ GY Q G   E    F +M   GV P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338

Query: 578 DEITYLAVLTS 588
           D IT+ ++L S
Sbjct: 339 DAITFSSLLPS 349



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 11/241 (4%)

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           IP   ++  +L+A SN   L+Q  QVH+ +I +    D      ++  Y  C + ++  +
Sbjct: 34  IPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91

Query: 434 VLSEID-KKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           +   +D +++++   N++ S  V      +AL  Y  +       + STF  ++KAC A+
Sbjct: 92  MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
            + +    +         D + FV S++I  Y + G I+   + F ++ +     WN M+
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GYA+ G    V   F+ M    + P+ +T+  VL+ C    L+            LHGL
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG-------VQLHGL 264

Query: 612 I 612
           +
Sbjct: 265 V 265


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 250/781 (32%), Positives = 414/781 (53%), Gaps = 27/781 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK--FADFR-RAFRFLFDTQN----RDIITYNALIS 54
           I+  ++  G   DP ++T+L++ + K  F D+  + F     +Q+    RD+  +N++I 
Sbjct: 82  IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141

Query: 55  GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSL--QENEIVHGVCLKLGF 109
           G  +F +    +  F R+   G+RPDAF+ S +V      G+   +E + +HG  L+   
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFV 168
            +  +L +  I+ Y K G  + A   F +  D  NV  +  M+ G+  +G  + S ++++
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261

Query: 169 EMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLY 223
             ++  ++L   S T  LGA   S +   G QIH   VK+G  +   VC  L    +++Y
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL----LSMY 317

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMI 280
            +CG   +A  +F  + +  +  W+  +AA  +   G  A  LF  +R      + +T+ 
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           N++S      +   GK + A  +K       +I +AL+++Y KCG   DA  +F  +  K
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQ 398
           D V+W S+I+G  +NG F +AL +F  M +   SL P+   M S+  A +  ++L+  +Q
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           VH  +IK+G +L+  + S LI  Y KC     + +V + +  +N V  N++ S     + 
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
              +++L+  +       +  + + VL A ++   L +GK++H   L+     D  +++A
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNA 617

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +IDMY KCG  + A+  F+K+   SL  WN M+ GY  HG      +LF++M K G  PD
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           ++T+L+++++C H+G V E +     M   +G+ P +EHYA +VDLLGR GLLE A   I
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
             MPI  D+ IW  LLSA   + N++LG+L+  KLL ++P+  STYV L NLY  AG+ N
Sbjct: 738 KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKN 797

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           +  KL   MKEK L K+PG SWI V   T+ F++G SS     EI+  L +L  +MV   
Sbjct: 798 EAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDED 857

Query: 759 K 759
           K
Sbjct: 858 K 858



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 158/628 (25%), Positives = 289/628 (46%), Gaps = 44/628 (7%)

Query: 47  ITYNALISGLARFCQSGP---ALKLFDRLRYQGLRP---DAFTFSSLVKACGSLQE---N 97
           I+  ++ SG+    Q G    AL L+ +  + G  P     FTF SL+KAC +L      
Sbjct: 22  ISPASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYG 79

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-------RDCLDLDNVAYTAM 150
           + +HG  + LG+    ++ +  +  Y K G +  A   F             D   + +M
Sbjct: 80  KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASFDVKEGEQIHGFGVKV 205
           + GY     F +    F  M   G+  + FSL+ V+       +F  +EG+QIHGF ++ 
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAA-ACDGV--EAF 261
              +   + L  A++++Y + G  +DA ++F EI +  +VV W+  I      G+   + 
Sbjct: 200 SLDTD--SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            L+   + N  ++   +    L +         G+QI     K+G      +  +L+SMY
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317

Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            KCG V +A ++F  ++ K    WN+M+A Y+EN +   ALD+F  M + S++P+ +T++
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           +++   S          VH+ + K       ++ S L+T Y KC    ++  V   +++K
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437

Query: 442 NAVHINALASVLVYASCHAEALELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           + V   +L S L       EAL+++  +       + +    + V  ACA +  L  G  
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H   +K     ++FV S++ID+Y KCG  E A + F  +  +++  WN+M+  Y+++  
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL-----IPQ 614
                +LFN M   G+ PD ++  +VL +      + + ++       LHG      IP 
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-------LHGYTLRLGIPS 610

Query: 615 LEHYA-CIVDLLGRVGLLEGAKMTIDQM 641
             H    ++D+  + G  + A+    +M
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKM 638



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 296/630 (46%), Gaps = 35/630 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGL--A 57
           QI+  +++N    D  L T LI  + KF     A+R   + +++ +++ +N +I G   +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRV 113
             C+S  +L L+   +   ++  + +F+  + AC S  EN      +H   +K+G  +  
Sbjct: 251 GICES--SLDLYMLAKNNSVKLVSTSFTGALGAC-SQSENSGFGRQIHCDVVKMGLHNDP 307

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           Y+ +  +  Y+K G +  AE  F   +D     + AMV  Y  N     + ++F  MR  
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367

Query: 174 GLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +  + F+L+ V+     +     G+ +H    K    S   + + +A++ LY +CG   
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS--TSTIESALLTLYSKCGCDP 425

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFND--FQINEYTMINLLSS 285
           DA  +F  + E D+V+W   I+  C      EA  +F D++ +D   + +   M ++ ++
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
             G   LR G Q+     K G +  V +G++LI +Y KCG    A  +F  +  ++ V+W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NSMI+ YS N     ++D+F  ML   + P+  ++ S+L A+S++ SL +   +H + ++
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---A 462
            G   D  + + LI  Y KC     ++ +  ++  K+ +  N +  +  Y S H +   A
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM--IYGYGS-HGDCITA 662

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           L L+  +  +    +  TF  ++ AC     +E+GK I    +K  Y  +  +E  + ++
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF-MKQDYGIEPNMEHYANMV 721

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVS-NLFNKMSKFGVKPD 578
           D+  + G +E+A    + +  ++ +  W  ++     H   H V   + +      ++P+
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH---HNVELGILSAEKLLRMEPE 778

Query: 579 E-ITYLAVLTSCCHAGLVREARTYLSCMSD 607
              TY+ ++     AGL  EA   L  M +
Sbjct: 779 RGSTYVQLINLYMEAGLKNEAAKLLGLMKE 808


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/664 (33%), Positives = 363/664 (54%), Gaps = 11/664 (1%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H + +KLG  + VY  +  +  Y K  E+ SA++ F +    D+V++  M+ G++  G  
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVL-GASFD--VKEGEQIHGFGVKVGFLSGVCNHLNN 217
           + S +V   MRS G EL+ ++  ++L G +F      G+Q+H   +K+G+   V  +  +
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENV--YAGS 138

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI 274
           A++++Y +C +  DA   F  I++ + VSW+  I   A A D   AF L   +     ++
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           ++ T   LL  +          Q+     K G   V ++ NALI+ Y KCG ++DA+ IF
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 335 DYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           D     +D V+WNS++A Y      + A  +   M E    P+ Y+  SI+ A  N    
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKRVLSEIDKKNAVHINALAS 451
                +H  +IK GF     + + LI+ Y K +  ++ E+  +   ++ K+ V  N++ +
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
            L       +A++ +  +  +  +++  +FS VL++C+ +   + G+ IH LALK   + 
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLES 438

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           + FV S++I MY KCG IEDA+R+F +  ++S   WNA+M GYAQHG  +   +LF  M 
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLME 498

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
           +  VK D IT++AVLT+C H GLV +   +L CM   +G+ P++EHYAC VDL GR G L
Sbjct: 499 EKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRL 558

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           E AK  I++MP  PD  +W++ L AC   GNI+L       LLE++P+   TYVLLSN+Y
Sbjct: 559 EEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMY 618

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
            +   W++  K+++ MKE+ + K PG+SWI V    H F A D SH   ++IY  L  L 
Sbjct: 619 GNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLL 678

Query: 752 EHMV 755
           E + 
Sbjct: 679 EEIT 682



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 267/545 (48%), Gaps = 17/545 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           +SL +K G   D      +++ + K  + R A     +   RD +++N +I+G       
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             +  +   +R  G   D +TF S++K     G     + VH + +K+G++  VY  S  
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ YAK  ++  A + F      + V++ AM+ GY   G+ + +  +   M   G ++++
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 180 FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +   +L    D        Q+HG  +K G    + N + NA++  Y +CG   DA ++F
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGL--ELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 237 DEITE-PDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           D      D+V+W+  +AA     +   AF L  D++ + F+ + Y+  +++S+   E I 
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC--GQVNDARSIFDYLIFKDSVSWNSMIA 350
             G+ +     K GF + V I NALISMY K   G + +A  IF+ L FKD VSWNS++ 
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G S+ G    A+  F HM   ++  + Y+ +++L + S+  + +   Q+H   +K G   
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLES 438

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA-SVLVYASCHAEALELYRTI 469
           ++ + S LI  Y KC  + +++R   E  K +++  NAL      +  C+  AL+L+  +
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNV-ALDLFFLM 497

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                +++  TF  VL AC+ +  +EQG K + C+         +   +  +D+Y + G 
Sbjct: 498 EEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGR 557

Query: 529 IEDAK 533
           +E+AK
Sbjct: 558 LEEAK 562



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 218/455 (47%), Gaps = 17/455 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S++IK G+  +    + L+  + K      A+         + +++NA+I+G A+  
Sbjct: 120 QVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAG 179

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A  L D +  +G + D  T++ L+          +   +HG  +K G      + +
Sbjct: 180 DRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCN 239

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I +Y+K G +  A+  F     + D V + +++  Y+   + D + ++ ++M+  G E
Sbjct: 240 ALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFE 299

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC--GQKLD 231
            + +S T+++ A F+      G  +HG  +K GF   V   ++NA++++Y++   G   +
Sbjct: 300 PDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSV--PISNALISMYLKSDYGSMKE 357

Query: 232 AVKMFDEITEPDVVSWSE---RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ +   D VSW+     ++      +A   F  +R     I+ Y+   +L S   
Sbjct: 358 ALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSD 417

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               + G+QI     K G      + ++LI MY KCG + DAR  F+      S++WN++
Sbjct: 418 LATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNAL 477

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + GY+++G  N ALD+F  M E  +  +  T  ++L A S+   ++Q  +     ++S +
Sbjct: 478 MFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKF-LRCMESDY 536

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
            +   M   +C +  YG+   L E+K ++ E+  K
Sbjct: 537 GVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFK 571



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 131/268 (48%), Gaps = 10/268 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK--FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++ L+IK G      +S  LIS + K  +   + A       + +D +++N++++GL++ 
Sbjct: 324 LHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQT 383

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
             S  A+K F  +R   +  D ++FS+++++C  L   Q  + +H + LK G  S  ++ 
Sbjct: 384 GSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVS 443

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I  Y+K G I  A   F +     ++ + A++ GY  +G+ + + ++F  M    ++
Sbjct: 444 SSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVK 503

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVK 234
           ++  +  AVL A   +   EQ   F   +    GV   + +    ++LY R G+  +A  
Sbjct: 504 MDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKA 563

Query: 235 MFDEIT-EPDVVSWSERIAA--ACDGVE 259
           + +E+  +PD   W   + A  +C  +E
Sbjct: 564 LIEEMPFKPDTTVWKTFLGACRSCGNIE 591


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/779 (30%), Positives = 414/779 (53%), Gaps = 30/779 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK-FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI+ L+ K  + +D ++S  LIS + K       A     D + ++ +++N++IS  ++ 
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVY 114
                A ++F  ++Y G RP  +TF SLV    SL E ++     +     K G  + ++
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-- 172
           + SG +  +AKSG +  A   F      + V    ++ G V     +++ ++F++M S  
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304

Query: 173 ---------LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
                    L     E+SL   +G    +K+G ++HG  +  G +  +   + N ++N+Y
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVG-IGNGLVNMY 359

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
            +CG   DA ++F  +T+ D VSW+  I         +EA   +K +R +D     +T+I
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           + LSS    +  + G+QI     K+G    VS+ NAL+++Y + G +N+ R IF  +   
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479

Query: 341 DSVSWNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           D VSWNS+I   + +     +A+  F +        N  T +S+L AVS+    +   Q+
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASC 458
           H   +K+    + +  + LI  YGKC  ++  +++ S + ++++ V  N++ S  ++   
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
            A+AL+L   +  + + ++   ++ VL A A++  LE+G  +H  +++A  + D+ V SA
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKP 577
           ++DMY KCG ++ A R F  +   +   WN+M+ GYA+HG   E   LF  M   G   P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D +T++ VL++C HAGL+ E   +   MSD +GL P++EH++C+ D+LGR G L+  +  
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779

Query: 638 IDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           I++MP+ P+  IW+++L AC        +LG  A   L +L+P+N   YVLL N+YA+ G
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            W D+ K RK+MK+  + KE GYSW+ +    H F AGD SH  +  IYK+L +L   M
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 186/734 (25%), Positives = 352/734 (47%), Gaps = 31/734 (4%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           +S L KN    D  L   LI+ + +  D   A +   +   R+ +++  ++SG +R  + 
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVS 117
             AL     +  +G+  + + F S+++AC  +    I     +HG+  KL ++    + +
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 118 GFIENYAKSGEIVSAEMC-FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I  Y K    V   +C F D    ++V++ +++  Y   G+   +  +F  M+  G  
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 177 LNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             E++      TA      DV+  EQI     K G L+ +   + + +++ + + G    
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL--FVGSGLVSAFAKSGSLSY 261

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS--- 285
           A K+F+++   + V+ +  +        G EA  LF D+  +   ++  + + LLSS   
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPE 320

Query: 286 --VGGERILRAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
             +  E  L+ G+++       G ++ +V IGN L++MY KCG + DAR +F ++  KDS
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWNSMI G  +NG F +A++ +  M    ++P  +T+ S L + ++ K  K   Q+H  
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS-CHAE 461
            +K G  L+ S+ + L+T Y +   LNE +++ S + + + V  N++   L  +     E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           A+  +     + +++N  TFS VL A ++++  E GK IH LALK     +   E+A+I 
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560

Query: 522 MYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
            Y KCG ++  ++ F ++   RD++  WN+M+ GY  +    +  +L   M + G + D 
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVT-WNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
             Y  VL++      +       +C S    L   +   + +VD+  + G L+ A    +
Sbjct: 620 FMYATVLSAFASVATLERGMEVHAC-SVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678

Query: 640 QMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
            MP+  +++ W S++S    +G  +  L L    KL    P +  T+V + +  + AG+ 
Sbjct: 679 TMPV-RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737

Query: 698 NDVGKLRKEMKEKF 711
            +  K  + M + +
Sbjct: 738 EEGFKHFESMSDSY 751


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/757 (31%), Positives = 391/757 (51%), Gaps = 17/757 (2%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G   D  LS  L+  + K      A        NR+++++++++S   +   +  AL  F
Sbjct: 70  GLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYF 129

Query: 70  DRLRYQGL---RPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENY 123
             L +Q     + + +  +S+++AC      E    VH   +K GF   VY+ +  +  Y
Sbjct: 130 --LEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLY 187

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           AK GEI  A + F   +    V +TA++ GY  +G  + S ++F  M    +  +++ L+
Sbjct: 188 AKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLS 247

Query: 184 AVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++L A   +   K G+QIH + ++      V  +  N +++ Y +CG+      +FD + 
Sbjct: 248 SILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY--NVLIDFYTKCGRVKAGKALFDRLD 305

Query: 241 EPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             +++SW+  IA         EA  L  ++    ++ +EY   ++L+S G    L+ G+Q
Sbjct: 306 VKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQ 365

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I ++  KV       + NALI MY KC  ++DA+ +FD +     V +N+MI GYS  G+
Sbjct: 366 IHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGY 425

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
              AL++F  M    + P+  T  S+L   +    L+ + Q+H  IIK GF LD    S 
Sbjct: 426 LCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSA 485

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y KC+ + +++ V      K+ V  N+L S         EA +LY  +  S    N
Sbjct: 486 LIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPN 545

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             TF+ +  A + +  L  G+  H   +K   + D F+ +A++DMY KCG++E+A++ F 
Sbjct: 546 EFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFS 605

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
                  A WN+M+  YAQHG   E   +F  M    + P+ +T+++VL++C H G V +
Sbjct: 606 SSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVED 665

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              + + M+  +G+ P +EHYA +V LLGR G L  A+  I++M I P A +W+SLLSAC
Sbjct: 666 GLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSAC 724

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++GN++L   A    + + P +  +YV+LSN++AS GMW DV +LR +M    + KEPG
Sbjct: 725 RVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPG 784

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SWI V G  H F + D  H ++  IY  L +L   M
Sbjct: 785 QSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQM 821



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 128/274 (46%), Gaps = 14/274 (5%)

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
           G  +A++L A  ++KS+    +VH  ++  G   D  + + L+ +Y K  ++ ++  +  
Sbjct: 40  GRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFD 99

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC-REVNGSTFSIVLKACAAMTDLE 495
           ++  +N V  +++ S+      + +AL  +     +C  ++N    + +++AC      E
Sbjct: 100 KMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGE 159

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            G  +H   +K+ + +D++V ++++ +Y K G I+ A+  F  +   +   W A++ GY 
Sbjct: 160 PGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYT 219

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           + G       LFN M +  V PD+    ++L +C   G       YL     +H  + + 
Sbjct: 220 KSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLG-------YLKGGKQIHAYVLRS 272

Query: 616 E------HYACIVDLLGRVGLLEGAKMTIDQMPI 643
           E       Y  ++D   + G ++  K   D++ +
Sbjct: 273 ETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDV 306



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 50/256 (19%), Positives = 104/256 (40%), Gaps = 35/256 (13%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           +V G   + +L A  +   +   + +HC  +      D+F+ + ++  Y K G++ DA  
Sbjct: 37  KVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGT 96

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV-KPDEITYLAVLTSC---- 589
            F K+   +L  W++++  Y Q G   +    F +  +  V K +E    +++ +C    
Sbjct: 97  LFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRD 156

Query: 590 -------CHAGLVREA-------RTYLSCMSDLHGLIPQLE------------HYACIVD 623
                   H+ +++          T L  +   HG I +               +  I+ 
Sbjct: 157 GGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIIT 216

Query: 624 LLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
              + G  E +    + M    + PD ++  S+L+AC++ G +  G    + +L  +   
Sbjct: 217 GYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKM 276

Query: 681 E-STYVLLSNLYASAG 695
           + STY +L + Y   G
Sbjct: 277 DVSTYNVLIDFYTKCG 292


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/755 (30%), Positives = 386/755 (51%), Gaps = 17/755 (2%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKL 68
           H D +   T+++ +    D   A        + D++++NAL+SG   +CQ G    ++ L
Sbjct: 67  HRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSG---YCQRGMFRDSVGL 123

Query: 69  FDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAK 125
              +  +G+ PD  T + L+KACG L++  +   +H V +K G    V   S  ++ Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
              +  A   F    + ++V++ A + G V N ++ +  E+FV+M+ LGL +++ +  +V
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243

Query: 186 L---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
                A   +    Q+H   +K  F +     +  AI+++Y +    +DA + F  +   
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSAD--RVVGTAIVDVYAKADSLVDARRAFFSLPNH 301

Query: 243 DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            V + +  +        G EA  LF+ +  +    +  ++  + S+    +    G Q+ 
Sbjct: 302 TVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
               K GF   V + NA++ +YGKC  + +A  +F  +  +DSVSWN++IA   +N  + 
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
             +     ML + + P+ +T  S+L+A +  +SL+    VH   IKSG  LD  + S ++
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC  + E++++   I  +  V  N++ S         EA + +  +     + +  
Sbjct: 482 DMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T++ VL  CA +  +E GK IH   +K     D ++ S ++DMY KCG + D+   F K 
Sbjct: 542 TYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA 601

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
            +     WNAM+ GYA HG   E   +F +M +  V P+  T++AVL +C H GL+ +  
Sbjct: 602 QKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGC 661

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            Y   M+  + L PQLEH+AC+VD+LGR    + A   I  MP+  DA IW++LLS C I
Sbjct: 662 RYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKI 721

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
             ++++   A S +L L PD+ S Y+LLSN+YA +G W DV + R+ M++  L KEPG S
Sbjct: 722 RQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCS 781

Query: 720 WIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           WI V    H F AGD  H +S+E+Y+ L  L   M
Sbjct: 782 WIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEM 816



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 251/576 (43%), Gaps = 51/576 (8%)

Query: 83  TFSSLVKACG-----SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
           TFS L + C      +L   +  H   L  GF    ++ +  ++ YA+ G    A   F 
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 138 DCLDLDNVAYTAMVCGYV----------------------WN---------GEFDKSKEV 166
                D V++  M+  Y                       WN         G F  S  +
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 167 FVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
            VEM   G+  +  +L  +L   G   D+  G QIH   VK G    V     +A++++Y
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDV--RAGSALVDMY 181

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
            +C    DA++ F  + E + VSW   IA             LF  ++     +++    
Sbjct: 182 GKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYA 241

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++  S      L   +Q+ A   K  F     +G A++ +Y K   + DAR  F  L   
Sbjct: 242 SVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNH 301

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
              + N+M+ G    G   +AL +F  M    +  +  +++ +  A +  K   Q +QVH
Sbjct: 302 TVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              IKSGF +D  + + ++  YGKC AL E+  V  E++++++V  NA+ + L    C+ 
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           + +     +     E +  T+  VLKACA +  LE G  +H  A+K+    D FV S V+
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMYCKCG I +A++   +I    L  WN+++ G++ +    E    F++M   GVKPD  
Sbjct: 482 DMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           TY  VL +C +   +   +        +HG I + E
Sbjct: 542 TYATVLDTCANLATIELGK-------QIHGQIIKQE 570



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 252/511 (49%), Gaps = 21/511 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+++ +K G  +D    + L+  + K      A RF      R+ +++ A I+G  +  
Sbjct: 157 QIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNE 216

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L+LF +++  GL      ++S+ ++C +   L     +H   +K  FS+   + +
Sbjct: 217 QYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGT 276

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+  +V A   F    +    A  AM+ G V  G   ++ ++F  M   G+  
Sbjct: 277 AIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGF 336

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL+ V  A  +VK   +G Q+H   +K GF   VC  + NAI++LY +C   ++A  
Sbjct: 337 DVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC--VRNAILDLYGKCKALVEAYL 394

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKD--------LRFNDFQINEYTMINLLSSV 286
           +F E+ + D VSW+  IAA    +E    ++D        LR+   + +++T  ++L + 
Sbjct: 395 VFQEMEQRDSVSWNAIIAA----LEQNECYEDTIAYLNEMLRYG-MEPDDFTYGSVLKAC 449

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G + L  G  +     K G      + + ++ MY KCG + +A+ + D +  ++ VSWN
Sbjct: 450 AGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWN 509

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I+G+S N    +A   F  ML+  + P+ +T A++L+  +N  +++   Q+H  IIK 
Sbjct: 510 SIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQ 569

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
             L D+ + S L+  Y KC  + +S  +  +  K + V  NA+           EALE++
Sbjct: 570 EMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMF 629

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
             +  +    N +TF  VL+AC+ +  L+ G
Sbjct: 630 ERMQQANVVPNHATFVAVLRACSHVGLLDDG 660



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 188/410 (45%), Gaps = 43/410 (10%)

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +  G   L  G+   A     GFM    + N L+ MY +CG    AR +FD +  +D+
Sbjct: 11  LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70

Query: 343 VSWNSM-------------------------------IAGYSENGFFNQALDMFCHMLEF 371
           VSWN+M                               ++GY + G F  ++ +   M   
Sbjct: 71  VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + P+  T+A +L+A    + L   +Q+H+  +K+G  +D    S L+  YGKC +L ++
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDA 190

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            R    + ++N+V   A  +  V    +   LEL+  +      V+   ++ V ++CAA+
Sbjct: 191 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAI 250

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           T L   + +H  A+K ++  D  V +A++D+Y K  ++ DA+RAF  +   ++   NAMM
Sbjct: 251 TCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMM 310

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS-----CMS 606
           +G  + G   E   LF  M++ G+  D ++   V ++C       E + YL      C++
Sbjct: 311 VGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACA------EVKGYLQGLQVHCLA 364

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              G    +     I+DL G+   L  A +   +M    D+  W ++++A
Sbjct: 365 IKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 413



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 225/467 (48%), Gaps = 21/467 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++  IKN    D ++ T ++  + K     D RRAF   F   N  +   NA++ GL 
Sbjct: 258 QLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAF---FSLPNHTVQACNAMMVGLV 314

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVY 114
           R      AL+LF  +   G+  D  + S +  AC  ++   +   VH + +K GF   V 
Sbjct: 315 RTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC 374

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y K   +V A + F++    D+V++ A++     N  ++ +     EM   G
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYG 434

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E ++F+  +VL A   ++    G  +HG  +K G   G+   +++ ++++Y +CG   +
Sbjct: 435 MEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGL--GLDAFVSSTVVDMYCKCGMITE 492

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+ D I   ++VSW+  I+         EA   F ++     + + +T   +L +   
Sbjct: 493 AQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCAN 552

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  GKQI     K   +    I + L+ MY KCG + D+  +F+     D VSWN+M
Sbjct: 553 LATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAM 612

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY+ +G   +AL+MF  M + +++PN  T  ++L A S+   L    + + +++ S +
Sbjct: 613 ICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCR-YFYLMTSRY 671

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASV 452
            L+  +   +C++   G+     E+ + +  +  + +AV    L S+
Sbjct: 672 KLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSI 718


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/765 (31%), Positives = 395/765 (51%), Gaps = 14/765 (1%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++S + K G   D +   T+IS          A   L        + +NA+ISG A+   
Sbjct: 256  LFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGL 315

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
                L L+  +R  GL P   TF+S++ A  +++   E + +H   +  G  + V++ S 
Sbjct: 316  EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 375

Query: 119  FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             I  YAK G    A+  F    + + V + AM+ G+V N   +++  +F  M    L+ +
Sbjct: 376  LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 435

Query: 179  EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            EF+  ++LGA   +     G+Q+H   +K      +   + NA +++Y + G   DA  +
Sbjct: 436  EFTFVSILGACTYLSSFYLGKQVHCVTIKNCM--DISLFVANATLDMYSKYGAIGDAKAL 493

Query: 236  FDEITEPDVVSWSE---RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            F  I   D +SW+     +A   +  EA  + K +R +    ++ +    +++    R  
Sbjct: 494  FSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRAT 553

Query: 293  RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
              GKQI     K G     ++G++LI +Y K G V  +R IF  +     V  N++IAG+
Sbjct: 554  ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 613

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +N   ++A+ +F  +L+  L P+  T +SIL   S S +     QVH + +KSG L DD
Sbjct: 614  VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 673

Query: 413  SMISC-LITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            +++   L   Y K   L ++ ++L+E+ D KN     A+ S          +L  +  + 
Sbjct: 674  TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 733

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                  + +TF+ VLKAC+ +T    GK IH L  K+ +       SA+IDMY KCG + 
Sbjct: 734  HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVI 793

Query: 531  DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             +  AF+++  +  +  WN+M++G+A++G   E   LF KM +  +KPDE+T+L VL +C
Sbjct: 794  SSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIAC 853

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             H+GL+ E R +   M  ++GL P+L+HYAC +DLLGR G L+ A+  IDQ+P  PD  +
Sbjct: 854  THSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVV 913

Query: 650  WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            W + L+AC ++ + + G +A  KL+EL+P   STYVLLS+L+A+ G W +    R+ M+E
Sbjct: 914  WATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMRE 973

Query: 710  KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K + K PG SWI VG  T  F   D  H  +  IY+ L  L   M
Sbjct: 974  KGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMM 1018



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 171/702 (24%), Positives = 313/702 (44%), Gaps = 60/702 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G          L+  + K  D   A R        D I ++++I+   R  
Sbjct: 189 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 248

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               AL LF R+   G  PD  T  ++                                I
Sbjct: 249 CYQEALALFSRMDKMGSAPDQVTLVTI--------------------------------I 276

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
              A SG +  A    +       VA+ A++ G+  +G       ++ +MRS GL     
Sbjct: 277 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 336

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++L A+ ++K   EG+Q+H   V  G  + V   + ++++NLY +CG   DA  +FD
Sbjct: 337 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANV--FVGSSLINLYAKCGCPSDAKNVFD 394

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              E ++V W+  +          EA  +F+ +     Q +E+T +++L +         
Sbjct: 395 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 454

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+     K      + + NA + MY K G + DA+++F  + +KDS+SWN++  G ++
Sbjct: 455 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 514

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ M   M    + P+  + ++ + A SN ++ +   Q+H   IK G   + ++
Sbjct: 515 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 574

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S LI  Y K   +  S+++ +++D  + V INAL +  V  +   EA++L++ +     
Sbjct: 575 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 634

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR--YDQDIFVESAVIDMYCKCGTIEDA 532
           + +  TFS +L  C+   +   GK +HC  LK+   YD D  +  ++  +Y K   +EDA
Sbjct: 635 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYD-DTLLGVSLAGIYLKSKMLEDA 693

Query: 533 KRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            +   ++    +L  W A++ GYAQ+G        F +M    V+ DE T+ +VL +C  
Sbjct: 694 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 753

Query: 592 AGLVREARTYLSCMSDLHGLIPQL------EHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
                + +       ++HGLI +          + ++D+  + G +  +     ++    
Sbjct: 754 VTAFADGK-------EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQ 806

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ--PDNESTYV 685
           D   W S++      G  D  LL   K+ ELQ  PD E T++
Sbjct: 807 DIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPD-EVTFL 847



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 155/595 (26%), Positives = 278/595 (46%), Gaps = 41/595 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +++ G  L   L  +L+  + K      A+  L     R     ++L+S  AR   
Sbjct: 88  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147

Query: 62  SGPALKLFDRLR-YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            G  L  F  +R   G RPD F  + ++ AC   G L     VH   +K GFSS V+  +
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G++ +A   F      D + +++M+  Y   G + ++  +F  M  +G   
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 267

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++ +L  ++                      SG  +H                 A  +  
Sbjct: 268 DQVTLVTIISTLAS-----------------SGRLDH-----------------ATALLK 293

Query: 238 EITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++  P  V+W+  I+  A  G+E    GL+KD+R         T  ++LS+    +    
Sbjct: 294 KMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE 353

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+Q+ A     G    V +G++LI++Y KCG  +DA+++FD    K+ V WN+M+ G+ +
Sbjct: 354 GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 413

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ MF +M+ ++L  + +T  SIL A +   S     QVH   IK+   +   +
Sbjct: 414 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 473

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            +  +  Y K  A+ ++K + S I  K+++  NAL   L       EA+ + + +     
Sbjct: 474 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 533

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +  +FS  + AC+ +   E GK IHCLA+K     +  V S++ID+Y K G +E +++
Sbjct: 534 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 593

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            F ++   S+   NA++ G+ Q+    E   LF ++ K G+KP  +T+ ++L+ C
Sbjct: 594 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 648



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 248/557 (44%), Gaps = 51/557 (9%)

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           Q    +HG  L+ G      L    +E Y KSG +  A        +  + A ++++  +
Sbjct: 83  QTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCH 142

Query: 155 VWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSG 210
             +G        F  +R + G   ++F L  VL A   V     G Q+H   VK GF S 
Sbjct: 143 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 202

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA----AACDGVEAFGLFKD 266
           V      A++++Y +CG   +A ++FD I  PD + WS  IA      C   EA  LF  
Sbjct: 203 V--FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY-QEALALFSR 259

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +       ++ T++ ++S++                                      G+
Sbjct: 260 MDKMGSAPDQVTLVTIISTLASS-----------------------------------GR 284

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++ A ++   +    +V+WN++I+G++++G     L ++  M  + L P   T AS+L A
Sbjct: 285 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA 344

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +N K+  +  Q+H+  +  G   +  + S LI  Y KC   +++K V     +KN V  
Sbjct: 345 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 404

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+ +  V      EA+ +++ +     + +  TF  +L AC  ++    GK +HC+ +K
Sbjct: 405 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 464

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
              D  +FV +A +DMY K G I DAK  F  I       WNA+ +G AQ+    E   +
Sbjct: 465 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 524

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREART--YLSCMSDLHGLIPQLEHYACIVDL 624
             +M   G+ PD++++   + +C +   +R   T   + C++  +G+       + ++DL
Sbjct: 525 LKRMRLHGITPDDVSFSTAINACSN---IRATETGKQIHCLAIKYGICSNHAVGSSLIDL 581

Query: 625 LGRVGLLEGAKMTIDQM 641
             + G +E ++    Q+
Sbjct: 582 YSKHGDVESSRKIFAQV 598



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 16/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L IK G   +  + ++LI  ++K  D   + +         I+  NALI+G  +  
Sbjct: 558 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 617

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQE--NEIVHGVCLKLG-FSSRVYLV 116
               A++LF ++   GL+P + TFSS++  C GSL     + VH   LK G       L 
Sbjct: 618 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 677

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
                 Y KS  +  A     +  D  N+  +TA++ GY  NG  D S   F  MR   +
Sbjct: 678 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 737

Query: 176 ELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E +  +VL A  DV    +G++IHG   K GF  G      +A++++Y +CG  + +
Sbjct: 738 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGF--GSYETATSALIDMYSKCGDVISS 795

Query: 233 VKMFDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            + F E+  + D++ W+  I   A +G   EA  LF+ +     + +E T + +L +   
Sbjct: 796 FEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTH 855

Query: 289 ERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G+       KV G    +      I + G+ G + +A+   D L F+ D V W 
Sbjct: 856 SGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWA 915

Query: 347 SMIA 350
           + +A
Sbjct: 916 TYLA 919


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/671 (32%), Positives = 359/671 (53%), Gaps = 11/671 (1%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L    + H + +K G ++ +Y  +  I  YAK GEI  A   F +    D V++  M+ 
Sbjct: 14  ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIA 73

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLS 209
           G+V  G F+ + E    M+  G  ++ +S  ++L        V+ G+Q+H   VK+G+  
Sbjct: 74  GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKD 266
            V     +A++++Y +C +  DA ++F  I   + V+W+  I   A   D   AF L   
Sbjct: 134 NV--FAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +     +I++ T   LL+ +    + +   Q+ A   K G     ++ NA+I+ Y +CG 
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251

Query: 327 VNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
           + DA  +FD  I  +D V+WNSM+A Y  N    +A  +F  M      P+ YT  S++ 
Sbjct: 252 IEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVIS 311

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA--LNESKRVLSEIDKKNA 443
           A        Q   +H  +IK G      + + LI  Y K ++  ++E+  +   ++ K+ 
Sbjct: 312 AAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDH 371

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           V  N++ +    +    +AL+ +  +      ++   FS VL++C+ +  L+ G+ +H L
Sbjct: 372 VSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL 431

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
            LK+ ++ + FV S++I MY KCG IEDA+++F    +DS   WN+++ GYAQHG     
Sbjct: 432 VLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIA 491

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
            +LF  M    VK D IT++AVLT+C H GLV E  ++L  M   +G+ P++EHYAC++D
Sbjct: 492 LDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMID 551

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           LLGR G L+ AK  I+ MP  PDA +W++LL AC   G+I+L     S LLEL+P+   T
Sbjct: 552 LLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCT 611

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           YVLLS+++     WN+   +++ MKE+ + K PG+SWI V      F A D SH   +EI
Sbjct: 612 YVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEI 671

Query: 744 YKELIKLYEHM 754
           Y  L +L E +
Sbjct: 672 YLRLGELMEEI 682



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 275/548 (50%), Gaps = 27/548 (4%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           L IK+G       +  +IS + K  + R A +   +T  RD +++N +I+G         
Sbjct: 24  LAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFET 83

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVK--AC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL+    ++  G   D ++F S++K  AC G ++  + VH + +K+G+   V+  S  ++
Sbjct: 84  ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLD 143

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YAK   +  A   F+     ++V + A++ GY   G+   +  +   M   G+E+++ +
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203

Query: 182 LTAVLGASFDV---KEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMF 236
              +L    D    K   Q+H   VK G  S   VC    NAI+  Y  CG   DA ++F
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC----NAIITAYSECGSIEDAERVF 259

Query: 237 DEITEP-DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           D   E  D+V+W+  +AA        EAF LF +++   F+ + YT  +++S+       
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQ 319

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGK--CGQVNDARSIFDYLIFKDSVSWNSMIA 350
             GK +     K G   +V I N+LI+MY K     +++A +IF+ L  KD VSWNS++ 
Sbjct: 320 GQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILT 379

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+S++G    AL  F +M    ++ + Y  +++L + S+  +L+   QVH  ++KSGF  
Sbjct: 380 GFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEP 439

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYR 467
           +  + S LI  Y KC  + ++++      K +++  N+L  +  YA  H     AL+L+ 
Sbjct: 440 NGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL--IFGYAQ-HGRGKIALDLFF 496

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +     +++  TF  VL AC+ +  +E+G +    ++++ Y     +E  + +ID+  +
Sbjct: 497 LMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF-LKSMESDYGIPPRMEHYACMIDLLGR 555

Query: 526 CGTIEDAK 533
            G +++AK
Sbjct: 556 AGRLDEAK 563



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 229/449 (51%), Gaps = 17/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S+++K G+  +    + L+  + K      AF        R+ +T+NALISG A+  
Sbjct: 121 QVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVG 180

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G A  L D +  +G+  D  TF+ L+        +++   VH   +K G +S   + +
Sbjct: 181 DRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I  Y++ G I  AE  F   ++  D V + +M+  Y+ N + +++ ++F+EM+ LG E
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFE 300

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL--D 231
            + ++ T+V+ A+F+     +G+ +HG  +K G    V   ++N+++ +Y++   K   +
Sbjct: 301 PDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLV--PISNSLIAMYLKSHSKSMDE 358

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ +   D VSW+  +   +  G+  +A   F+++R     I+ Y    +L S   
Sbjct: 359 ALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSD 418

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L+ G+Q+     K GF     + ++LI MY KCG + DAR  FD      S++WNS+
Sbjct: 419 LATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL 478

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY+++G    ALD+F  M +  +  +  T  ++L A S+   +++        ++S +
Sbjct: 479 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKS-MESDY 537

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVL 435
            +   M   +C+I   G+   L+E+K ++
Sbjct: 538 GIPPRMEHYACMIDLLGRAGRLDEAKALI 566



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 25/305 (8%)

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S+  +L +A   H   IKSG        + +I+ Y KC  +  + ++  E  +++AV  N
Sbjct: 10  SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            + +  V       ALE  +++      V+G +F  +LK  A +  +E G+ +H + +K 
Sbjct: 70  TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            Y+ ++F  SA++DMY KC  +EDA   F+ I   +   WNA++ GYAQ G       L 
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLL 189

Query: 568 NKMSKFGVKPDEITYLAV-----------LTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           + M   GV+ D+ T+  +           LT+  HA +V+            HGL     
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK------------HGLASDTT 237

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLL 674
               I+      G +E A+   D      D   W S+L+A  +    +    L    ++L
Sbjct: 238 VCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVL 297

Query: 675 ELQPD 679
             +PD
Sbjct: 298 GFEPD 302


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/765 (31%), Positives = 395/765 (51%), Gaps = 14/765 (1%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++S + K G   D +   T+IS          A   L        + +NA+ISG A+   
Sbjct: 246  LFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGL 305

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
                L L+  +R  GL P   TF+S++ A  +++   E + +H   +  G  + V++ S 
Sbjct: 306  EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365

Query: 119  FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             I  YAK G    A+  F    + + V + AM+ G+V N   +++  +F  M    L+ +
Sbjct: 366  LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425

Query: 179  EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            EF+  ++LGA   +     G+Q+H   +K      +   + NA +++Y + G   DA  +
Sbjct: 426  EFTFVSILGACTYLSSFYLGKQVHCVTIKNCM--DISLFVANATLDMYSKYGAIGDAKAL 483

Query: 236  FDEITEPDVVSWSE---RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            F  I   D +SW+     +A   +  EA  + K +R +    ++ +    +++    R  
Sbjct: 484  FSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRAT 543

Query: 293  RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
              GKQI     K G     ++G++LI +Y K G V  +R IF  +     V  N++IAG+
Sbjct: 544  ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +N   ++A+ +F  +L+  L P+  T +SIL   S S +     QVH + +KSG L DD
Sbjct: 604  VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 663

Query: 413  SMISC-LITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            +++   L   Y K   L ++ ++L+E+ D KN     A+ S          +L  +  + 
Sbjct: 664  TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 723

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                  + +TF+ VLKAC+ +T    GK IH L  K+ +       SA+IDMY KCG + 
Sbjct: 724  HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVI 783

Query: 531  DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             +  AF+++  +  +  WN+M++G+A++G   E   LF KM +  +KPDE+T+L VL +C
Sbjct: 784  SSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIAC 843

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             H+GL+ E R +   M  ++GL P+L+HYAC +DLLGR G L+ A+  IDQ+P  PD  +
Sbjct: 844  THSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVV 903

Query: 650  WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            W + L+AC ++ + + G +A  KL+EL+P   STYVLLS+L+A+ G W +    R+ M+E
Sbjct: 904  WATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMRE 963

Query: 710  KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K + K PG SWI VG  T  F   D  H  +  IY+ L  L   M
Sbjct: 964  KGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMM 1008



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 171/702 (24%), Positives = 313/702 (44%), Gaps = 60/702 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G          L+  + K  D   A R        D I ++++I+   R  
Sbjct: 179 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 238

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               AL LF R+   G  PD  T  ++                                I
Sbjct: 239 CYQEALALFSRMDKMGSAPDQVTLVTI--------------------------------I 266

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
              A SG +  A    +       VA+ A++ G+  +G       ++ +MRS GL     
Sbjct: 267 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 326

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++L A+ ++K   EG+Q+H   V  G  + V   + ++++NLY +CG   DA  +FD
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANV--FVGSSLINLYAKCGCPSDAKNVFD 384

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              E ++V W+  +          EA  +F+ +     Q +E+T +++L +         
Sbjct: 385 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+     K      + + NA + MY K G + DA+++F  + +KDS+SWN++  G ++
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ M   M    + P+  + ++ + A SN ++ +   Q+H   IK G   + ++
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S LI  Y K   +  S+++ +++D  + V INAL +  V  +   EA++L++ +     
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR--YDQDIFVESAVIDMYCKCGTIEDA 532
           + +  TFS +L  C+   +   GK +HC  LK+   YD D  +  ++  +Y K   +EDA
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYD-DTLLGVSLAGIYLKSKMLEDA 683

Query: 533 KRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            +   ++    +L  W A++ GYAQ+G        F +M    V+ DE T+ +VL +C  
Sbjct: 684 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 743

Query: 592 AGLVREARTYLSCMSDLHGLIPQL------EHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
                + +       ++HGLI +          + ++D+  + G +  +     ++    
Sbjct: 744 VTAFADGK-------EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQ 796

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ--PDNESTYV 685
           D   W S++      G  D  LL   K+ ELQ  PD E T++
Sbjct: 797 DIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPD-EVTFL 837



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 172/678 (25%), Positives = 309/678 (45%), Gaps = 47/678 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +++ G  L   L  +L+  + K      A+  L     R     ++L+S  AR   
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137

Query: 62  SGPALKLFDRLR-YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            G  L  F  +R   G RPD F  + ++ AC   G L     VH   +K GFSS V+  +
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G++ +A   F      D + +++M+  Y   G + ++  +F  M  +G   
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++ +L  ++                      SG  +H                 A  +  
Sbjct: 258 DQVTLVTIISTLAS-----------------SGRLDH-----------------ATALLK 283

Query: 238 EITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++  P  V+W+  I+  A  G+E    GL+KD+R         T  ++LS+    +    
Sbjct: 284 KMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE 343

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+Q+ A     G    V +G++LI++Y KCG  +DA+++FD    K+ V WN+M+ G+ +
Sbjct: 344 GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ MF +M+ ++L  + +T  SIL A +   S     QVH   IK+   +   +
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            +  +  Y K  A+ ++K + S I  K+++  NAL   L       EA+ + + +     
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +  +FS  + AC+ +   E GK IHCLA+K     +  V S++ID+Y K G +E +++
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F ++   S+   NA++ G+ Q+    E   LF ++ K G+KP  +T+ ++L S C   L
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSIL-SGCSGSL 642

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLG---RVGLLEGAKMTIDQMPIPPDAHIWQ 651
                  + C +   G++   +     V L G   +  +LE A   + +MP   +   W 
Sbjct: 643 NSAIGKQVHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 700

Query: 652 SLLSACTIYGNIDLGLLA 669
           +++S     G  D  L++
Sbjct: 701 AIISGYAQNGYGDHSLVS 718



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 164/689 (23%), Positives = 291/689 (42%), Gaps = 93/689 (13%)

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           Q    +HG  L+ G      L    +E Y KSG +  A        +  + A ++++  +
Sbjct: 73  QTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCH 132

Query: 155 VWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSG 210
             +G        F  +R + G   ++F L  VL A   V     G Q+H   VK GF S 
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA----AACDGVEAFGLFKD 266
           V      A++++Y +CG   +A ++FD I  PD + WS  IA      C   EA  LF  
Sbjct: 193 V--FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY-QEALALFSR 249

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +       ++ T++ ++S++                                      G+
Sbjct: 250 MDKMGSAPDQVTLVTIISTLASS-----------------------------------GR 274

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++ A ++   +    +V+WN++I+G++++G     L ++  M  + L P   T AS+L A
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA 334

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +N K+  +  Q+H+  +  G   +  + S LI  Y KC   +++K V     +KN V  
Sbjct: 335 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 394

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+ +  V      EA+ +++ +     + +  TF  +L AC  ++    GK +HC+ +K
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
              D  +FV +A +DMY K G I DAK  F  I       WNA+ +G AQ+    E   +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREART--YLSCMSDLHGLIPQLEHYACIVDL 624
             +M   G+ PD++++   + +C +   +R   T   + C++  +G+       + ++DL
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSN---IRATETGKQIHCLAIKYGICSNHAVGSSLIDL 571

Query: 625 LGRVGLLEGAKMTIDQ------MPI----------------------------PPDAHIW 650
             + G +E ++    Q      +PI                             P +  +
Sbjct: 572 YSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTF 631

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            S+LS C+   N  +G       L+  +  D+    V L+ +Y  + M  D  KL  EM 
Sbjct: 632 SSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 691

Query: 709 EKFLCKEPGYSWIH-VGGYTHHFYAGDSS 736
           +     +  + W   + GY  + Y GD S
Sbjct: 692 D----HKNLFEWTAIISGYAQNGY-GDHS 715



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 16/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L IK G   +  + ++LI  ++K  D   + +         I+  NALI+G  +  
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQE--NEIVHGVCLKLG-FSSRVYLV 116
               A++LF ++   GL+P + TFSS++  C GSL     + VH   LK G       L 
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
                 Y KS  +  A     +  D  N+  +TA++ GY  NG  D S   F  MR   +
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727

Query: 176 ELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E +  +VL A  DV    +G++IHG   K GF  G      +A++++Y +CG  + +
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGF--GSYETATSALIDMYSKCGDVISS 785

Query: 233 VKMFDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            + F E+  + D++ W+  I   A +G   EA  LF+ +     + +E T + +L +   
Sbjct: 786 FEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTH 845

Query: 289 ERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G+       KV G    +      I + G+ G + +A+   D L F+ D V W 
Sbjct: 846 SGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWA 905

Query: 347 SMIA 350
           + +A
Sbjct: 906 TYLA 909


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 242/765 (31%), Positives = 395/765 (51%), Gaps = 14/765 (1%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++S + K G   D +   T+IS          A   L        + +NA+ISG A+   
Sbjct: 246  LFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGL 305

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
                L L+  +R  GL P   TF+S++ A  +++   E + +H   +  G  + V++ S 
Sbjct: 306  EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365

Query: 119  FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             I  YAK G    A+  F    + + V + AM+ G+V N   +++  +F  M    L+ +
Sbjct: 366  LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425

Query: 179  EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            EF+  ++LGA   +     G+Q+H   +K      +   + NA +++Y + G   DA  +
Sbjct: 426  EFTFVSILGACTYLSSFYLGKQVHCVTIKNCM--DISLFVANATLDMYSKYGAIGDAKAL 483

Query: 236  FDEITEPDVVSWSE---RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            F  I   D +SW+     +A   +  EA  + K +R +    ++ +    +++    R  
Sbjct: 484  FSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRAT 543

Query: 293  RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
              GKQI     K G     ++G++LI +Y K G V  +R IF  +     V  N++IAG+
Sbjct: 544  ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +N   ++A+ +F  +L+  L P+  T +SIL   S S +     QVH + +KSG L DD
Sbjct: 604  VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 663

Query: 413  SMISC-LITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            +++   L   Y K   L ++ ++L+E+ D KN     A+ S          +L  +  + 
Sbjct: 664  TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 723

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                  + +TF+ VLKAC+ +T    GK IH L  K+ +       SA+IDMY KCG + 
Sbjct: 724  HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVI 783

Query: 531  DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             +  AF+++  +  +  WN+M++G+A++G   E   LF KM +  +KPDE+T+L VL +C
Sbjct: 784  SSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIAC 843

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             H+GL+ E R +   M  ++GL P+L+HYAC +DLLGR G L+ A+  IDQ+P  PD  +
Sbjct: 844  THSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVV 903

Query: 650  WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            W + L+AC ++ + + G +A  KL+EL+P   STYVLLS+L+A+ G W +    R+ M+E
Sbjct: 904  WATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMRE 963

Query: 710  KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K + K PG SWI VG  T  F   D  H  +  IY+ L  L   M
Sbjct: 964  KGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMM 1008



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 171/702 (24%), Positives = 313/702 (44%), Gaps = 60/702 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G          L+  + K  D   A R        D I ++++I+   R  
Sbjct: 179 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 238

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               AL LF R+   G  PD  T  ++                                I
Sbjct: 239 CYQEALALFSRMDKMGSAPDQVTLVTI--------------------------------I 266

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
              A SG +  A    +       VA+ A++ G+  +G       ++ +MRS GL     
Sbjct: 267 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 326

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++L A+ ++K   EG+Q+H   V  G  + V   + ++++NLY +CG   DA  +FD
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANV--FVGSSLINLYAKCGCPSDAKNVFD 384

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              E ++V W+  +          EA  +F+ +     Q +E+T +++L +         
Sbjct: 385 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYL 444

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+     K      + + NA + MY K G + DA+++F  + +KDS+SWN++  G ++
Sbjct: 445 GKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQ 504

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ M   M    + P+  + ++ + A SN ++ +   Q+H   IK G   + ++
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S LI  Y K   +  S+++ +++D  + V INAL +  V  +   EA++L++ +     
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR--YDQDIFVESAVIDMYCKCGTIEDA 532
           + +  TFS +L  C+   +   GK +HC  LK+   YD D  +  ++  +Y K   +EDA
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYD-DTLLGVSLAGIYLKSKMLEDA 683

Query: 533 KRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            +   ++    +L  W A++ GYAQ+G        F +M    V+ DE T+ +VL +C  
Sbjct: 684 NKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSD 743

Query: 592 AGLVREARTYLSCMSDLHGLIPQL------EHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
                + +       ++HGLI +          + ++D+  + G +  +     ++    
Sbjct: 744 VTAFADGK-------EIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQ 796

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ--PDNESTYV 685
           D   W S++      G  D  LL   K+ ELQ  PD E T++
Sbjct: 797 DIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPD-EVTFL 837



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 172/678 (25%), Positives = 309/678 (45%), Gaps = 47/678 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +++ G  L   L  +L+  + K      A+  L     R     ++L+S  AR   
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137

Query: 62  SGPALKLFDRLR-YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            G  L  F  +R   G RPD F  + ++ AC   G L     VH   +K GFSS V+  +
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G++ +A   F      D + +++M+  Y   G + ++  +F  M  +G   
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++ +L  ++                      SG  +H                 A  +  
Sbjct: 258 DQVTLVTIISTLAS-----------------SGRLDH-----------------ATALLK 283

Query: 238 EITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++  P  V+W+  I+  A  G+E    GL+KD+R         T  ++LS+    +    
Sbjct: 284 KMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVE 343

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+Q+ A     G    V +G++LI++Y KCG  +DA+++FD    K+ V WN+M+ G+ +
Sbjct: 344 GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ MF +M+ ++L  + +T  SIL A +   S     QVH   IK+   +   +
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            +  +  Y K  A+ ++K + S I  K+++  NAL   L       EA+ + + +     
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +  +FS  + AC+ +   E GK IHCLA+K     +  V S++ID+Y K G +E +++
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F ++   S+   NA++ G+ Q+    E   LF ++ K G+KP  +T+ ++L S C   L
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSIL-SGCSGSL 642

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLG---RVGLLEGAKMTIDQMPIPPDAHIWQ 651
                  + C +   G++   +     V L G   +  +LE A   + +MP   +   W 
Sbjct: 643 NSAIGKQVHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 700

Query: 652 SLLSACTIYGNIDLGLLA 669
           +++S     G  D  L++
Sbjct: 701 AIISGYAQNGYGDHSLVS 718



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 164/689 (23%), Positives = 291/689 (42%), Gaps = 93/689 (13%)

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           Q    +HG  L+ G      L    +E Y KSG +  A        +  + A ++++  +
Sbjct: 73  QTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCH 132

Query: 155 VWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSG 210
             +G        F  +R + G   ++F L  VL A   V     G Q+H   VK GF S 
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA----AACDGVEAFGLFKD 266
           V      A++++Y +CG   +A ++FD I  PD + WS  IA      C   EA  LF  
Sbjct: 193 V--FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQ-EALALFSR 249

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +       ++ T++ ++S++                                      G+
Sbjct: 250 MDKMGSAPDQVTLVTIISTLASS-----------------------------------GR 274

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++ A ++   +    +V+WN++I+G++++G     L ++  M  + L P   T AS+L A
Sbjct: 275 LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSA 334

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +N K+  +  Q+H+  +  G   +  + S LI  Y KC   +++K V     +KN V  
Sbjct: 335 AANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMW 394

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+ +  V      EA+ +++ +     + +  TF  +L AC  ++    GK +HC+ +K
Sbjct: 395 NAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
              D  +FV +A +DMY K G I DAK  F  I       WNA+ +G AQ+    E   +
Sbjct: 455 NCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCM 514

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREART--YLSCMSDLHGLIPQLEHYACIVDL 624
             +M   G+ PD++++   + +C +   +R   T   + C++  +G+       + ++DL
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSN---IRATETGKQIHCLAIKYGICSNHAVGSSLIDL 571

Query: 625 LGRVGLLEGAKMTIDQ------MPI----------------------------PPDAHIW 650
             + G +E ++    Q      +PI                             P +  +
Sbjct: 572 YSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTF 631

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            S+LS C+   N  +G       L+  +  D+    V L+ +Y  + M  D  KL  EM 
Sbjct: 632 SSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 691

Query: 709 EKFLCKEPGYSWIH-VGGYTHHFYAGDSS 736
           +     +  + W   + GY  + Y GD S
Sbjct: 692 D----HKNLFEWTAIISGYAQNGY-GDHS 715



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 16/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L IK G   +  + ++LI  ++K  D   + +         I+  NALI+G  +  
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQE--NEIVHGVCLKLG-FSSRVYLV 116
               A++LF ++   GL+P + TFSS++  C GSL     + VH   LK G       L 
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
                 Y KS  +  A     +  D  N+  +TA++ GY  NG  D S   F  MR   +
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNV 727

Query: 176 ELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E +  +VL A  DV    +G++IHG   K GF  G      +A++++Y +CG  + +
Sbjct: 728 RSDEATFASVLKACSDVTAFADGKEIHGLITKSGF--GSYETATSALIDMYSKCGDVISS 785

Query: 233 VKMFDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            + F E+  + D++ W+  I   A +G   EA  LF+ +     + +E T + +L +   
Sbjct: 786 FEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTH 845

Query: 289 ERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G+       KV G    +      I + G+ G + +A+   D L F+ D V W 
Sbjct: 846 SGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWA 905

Query: 347 SMIA 350
           + +A
Sbjct: 906 TYLA 909


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/664 (33%), Positives = 362/664 (54%), Gaps = 11/664 (1%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H + +KLG  + VY  +  +  Y K  E+ SA++ F +    D+V++  M+ G++  G  
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVL-GASFD--VKEGEQIHGFGVKVGFLSGVCNHLNN 217
           + S +V   MRS G EL+ ++  ++L G +F      G+Q+H   +K+G+   V  +  +
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENV--YAGS 138

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI 274
           A++++Y +C +  DA   F  I++ + VSW+  I   A A D   AF L   +     ++
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           ++ T   LL  +          Q+     K G   V ++ NALI+ Y KCG ++DA+ IF
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 335 DYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           D     +D V+WNS++A Y      + A  +   M E    P+ Y+  SI+ A  N    
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKRVLSEIDKKNAVHINALAS 451
                +H  +IK GF     + + LI+ Y K +  ++ E+  +   ++ K+ V  N++ +
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
            L       +A++ +  +  +  +++  +FS VL++C+ +   + G+ IH LALK   + 
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLES 438

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           + FV S++I MY KCG IEDA+R+F +  ++S   WNA+M GYAQHG  +   +LF  M 
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLME 498

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
              VK D IT++AVLT+C H GLV +   +L CM   +G+ P++EHYAC VDL GR G L
Sbjct: 499 XKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRL 558

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           E AK  I++MP  PD  +W++ L AC   GNI+L       LLE++P+   TYVLLSN+Y
Sbjct: 559 EEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMY 618

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
            +   W++  K+++ MKE+ + K PG+SWI V    H F A D SH   ++IY  L  L 
Sbjct: 619 GNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLL 678

Query: 752 EHMV 755
           E + 
Sbjct: 679 EEIT 682



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 267/545 (48%), Gaps = 17/545 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           +SL +K G   D      +++ + K  + R A     +   RD +++N +I+G       
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             +  +   +R  G   D +TF S++K     G     + VH + +K+G++  VY  S  
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ YAK  ++  A + F      + V++ AM+ GY   G+ + +  +   M   G ++++
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 180 FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +   +L    D        Q+HG  +K G    + N + NA++  Y +CG   DA ++F
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGL--ELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 237 DEITE-PDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           D      D+V+W+  +AA     +   AF L  D++ + F+ + Y+  +++S+   E I 
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC--GQVNDARSIFDYLIFKDSVSWNSMIA 350
             G+ +     K GF + V I NALISMY K   G + +A  IF+ L FKD VSWNS++ 
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G S+ G    A+  F HM   ++  + Y+ +++L + S+  + +   Q+H   +K G   
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLES 438

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA-SVLVYASCHAEALELYRTI 469
           ++ + S LI  Y KC  + +++R   E  K +++  NAL      +  C+  AL+L+  +
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNV-ALDLFFLM 497

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                +++  TF  VL AC+ +  +EQG K + C+         +   +  +D+Y + G 
Sbjct: 498 EXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGR 557

Query: 529 IEDAK 533
           +E+AK
Sbjct: 558 LEEAK 562



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 217/455 (47%), Gaps = 17/455 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S++IK G+  +    + L+  + K      A+         + +++NA+I+G A+  
Sbjct: 120 QVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAG 179

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A  L D +  +G + D  T++ L+          +   +HG  +K G      + +
Sbjct: 180 DRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCN 239

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I +Y+K G +  A+  F     + D V + +++  Y+   + D + ++ ++M+  G E
Sbjct: 240 ALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFE 299

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC--GQKLD 231
            + +S T+++ A F+      G  +HG  +K GF   V   ++NA++++Y++   G   +
Sbjct: 300 PDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSV--PISNALISMYLKSDYGSMKE 357

Query: 232 AVKMFDEITEPDVVSWSE---RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ +   D VSW+     ++      +A   F  +R     I+ Y+   +L S   
Sbjct: 358 ALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSD 417

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               + G+QI     K G      + ++LI MY KCG + DAR  F+      S++WN++
Sbjct: 418 LATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNAL 477

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + GY+++G  N ALD+F  M    +  +  T  ++L A S+   ++Q  +     ++S +
Sbjct: 478 MFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKF-LRCMESDY 536

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
            +   M   +C +  YG+   L E+K ++ E+  K
Sbjct: 537 GVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFK 571



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 131/268 (48%), Gaps = 10/268 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK--FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++ L+IK G      +S  LIS + K  +   + A       + +D +++N++++GL++ 
Sbjct: 324 LHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQT 383

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
             S  A+K F  +R   +  D ++FS+++++C  L   Q  + +H + LK G  S  ++ 
Sbjct: 384 GSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVS 443

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I  Y+K G I  A   F +     ++ + A++ GY  +G+ + + ++F  M    ++
Sbjct: 444 SSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVK 503

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVK 234
           ++  +  AVL A   +   EQ   F   +    GV   + +    ++LY R G+  +A  
Sbjct: 504 MDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKA 563

Query: 235 MFDEIT-EPDVVSWSERIAA--ACDGVE 259
           + +E+  +PD   W   + A  +C  +E
Sbjct: 564 LIEEMPFKPDTTVWKTFLGACRSCGNIE 591


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/616 (33%), Positives = 340/616 (55%), Gaps = 8/616 (1%)

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFD 191
           M F +  + + V++  ++ GY  + +F ++ E+F  +   G ELN F  T VL    S +
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 192 VKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
             E G  +HG  +KVG+  G    +  A+++ Y   G    A ++FDEI+  D+VSW+  
Sbjct: 61  WAELGRIVHGCVLKVGY--GSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGM 118

Query: 251 IAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           IA+  +     EA   F  +R   F+ N +T   +L +  G +   AGK +     K  +
Sbjct: 119 IASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              + +G  L+ +Y +CG  +DA   F  +   D + W+ MI+ ++++G   +AL++FC 
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQ 238

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    +IPN +T +S+L+A ++ +SL  +  +H H +K+G   D  + + L+  Y KC  
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + +S  +   +  +N V  N +    V       AL L+  +     +    T+S +L+A
Sbjct: 299 IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA +  LE G  +HCL  K  Y QD+ V +A+IDMY KCG+I+DA+  F  +       W
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           NA++ GY+ HG   E   +FN M +   KPDE+T++ VL++C + G + E + Y + M  
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            +G+ P +EHY C+V L+GR G L+ A   I+ +P  P   IW++LL AC I+ +++LG 
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
           ++  ++LEL+P +E+++VLLSN+YA A  W +V  +RK MK K + KEPG SWI   G  
Sbjct: 539 ISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNV 598

Query: 728 HHFYAGDSSHSQSKEI 743
           H F   D+SH+  K I
Sbjct: 599 HCFTVADTSHADLKLI 614



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 236/456 (51%), Gaps = 14/456 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K G+  +  + T LI  ++       A     +  ++D++++  +I+  A    
Sbjct: 68  VHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDC 127

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              AL+ F ++R  G +P+ FTF+ ++KAC  LQ     + VH   LK  +   +Y+  G
Sbjct: 128 FSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVG 187

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +E Y + G+   A   F D    D + ++ M+  +  +G+ +K+ E+F +MR   +  N
Sbjct: 188 LLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPN 247

Query: 179 EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F+ ++VL AS D++     + IHG  +K G  + V   ++NA+M  Y +CG    ++++
Sbjct: 248 QFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDV--FVSNALMACYAKCGCIEQSMEL 305

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ +++ + VSW+  I +     DG  A  LF ++     Q  E T  ++L +      L
Sbjct: 306 FEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAAL 365

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G Q+     K  + + V++GNALI MY KCG + DAR +FD L  +D VSWN++I GY
Sbjct: 366 ELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGY 425

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           S +G   +A+ MF  M E    P+  T   +L A SN+  L +  Q  +  +K  + ++ 
Sbjct: 426 SMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTS-MKQDYGIEP 484

Query: 413 SM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            M   +C++   G+   L+++ + + +I  + +V I
Sbjct: 485 CMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMI 520



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 234/468 (50%), Gaps = 11/468 (2%)

Query: 40  DTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE- 98
           +   R+ +++  LI G A+  +   A +LF RL  +G   + F F++++K   S++  E 
Sbjct: 5   EMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAEL 64

Query: 99  --IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
             IVHG  LK+G+ S  ++ +  I+ Y+ SG +  A   F +    D V++T M+  Y  
Sbjct: 65  GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAE 124

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCN 213
           N  F ++ E F +MR  G + N F+   VL A   ++    G+ +H   +K  +   +  
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDL-- 182

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFN 270
           ++   ++ LY RCG   DA + F ++ + DV+ WS    R A +    +A  +F  +R  
Sbjct: 183 YVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRA 242

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
               N++T  ++L +      L   K I     K G    V + NAL++ Y KCG +  +
Sbjct: 243 FVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQS 302

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F+ L  ++ VSWN++I  Y + G   +AL +F +ML + +     T +SIL A +  
Sbjct: 303 MELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATL 362

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            +L+  +QVH    K+ +  D ++ + LI  Y KC ++ +++ +   +D ++ V  NA+ 
Sbjct: 363 AALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAII 422

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                     EA++++  +  +  + +  TF  VL AC+    L++GK
Sbjct: 423 CGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGK 470



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 175/361 (48%), Gaps = 13/361 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K  +  D  +   L+  +T+  D   A+R   D    D+I ++ +IS  A+  Q
Sbjct: 169 VHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ 228

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
           S  AL++F ++R   + P+ FTFSS+++A     SL  ++ +HG  LK G S+ V++ + 
Sbjct: 229 SEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNA 288

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK G I  +   F    D ++V++  ++  YV  G+ +++  +F  M    ++  
Sbjct: 289 LMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQAT 348

Query: 179 EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E + +++L A   +     G Q+H    K  +   V   + NA++++Y +CG   DA  M
Sbjct: 349 EVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVA--VGNALIDMYAKCGSIKDARFM 406

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD +   D VSW+  I        GVEA  +F  ++    + +E T + +LS+      L
Sbjct: 407 FDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRL 466

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIA 350
             GKQ   +     G    +     ++ + G+ G ++ A    + + F+ SV  W +++ 
Sbjct: 467 DEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLG 526

Query: 351 G 351
            
Sbjct: 527 A 527


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/678 (32%), Positives = 362/678 (53%), Gaps = 12/678 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C SL+E   +  + +K GF +     +  I  + K   I  A   F       +V 
Sbjct: 50  LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           Y  M+ GY  N     +   +  MR   +    +  T +L   G + D++ G +IHG  +
Sbjct: 110 YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVI 169

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EA 260
             GF S +      A++NLY +C Q  DA KMF+ + + D+VSW+  +A  A +G    A
Sbjct: 170 TNGFQSNL--FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRA 227

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             +   ++    + +  T++++L +V   + LR G+ I  + ++ GF  +V++  A++  
Sbjct: 228 VQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDT 287

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG V  AR +F  +  ++ VSWN+MI GY++NG   +A   F  ML+  + P   +M
Sbjct: 288 YFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSM 347

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
              L A +N   L++   VH  + +     D S+++ LI+ Y KC  ++ +  V   +  
Sbjct: 348 MGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH 407

Query: 441 KNAVHINALASVLVYAS--CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           K  V  NA+  +L YA   C  EAL L+  +     + +  T   V+ A A ++   Q K
Sbjct: 408 KTVVTWNAM--ILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH LA++   D+++FV +A+ID + KCG I+ A++ F  +    +  WNAM+ GY  +G
Sbjct: 466 WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNG 525

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              E  +LFN+M    VKP+EIT+L+V+ +C H+GLV E   Y   M + +GL P ++HY
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHY 585

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
             +VDLLGR G L+ A   I  MP+ P   +  ++L AC I+ N++LG     +L +L P
Sbjct: 586 GAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDP 645

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           D+   +VLL+N+YASA MW+ V ++R  M++K + K PG S + +    H FY+G ++H 
Sbjct: 646 DDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHP 705

Query: 739 QSKEIYKELIKLYEHMVA 756
           QSK IY  L  L + M A
Sbjct: 706 QSKRIYAYLETLGDEMKA 723



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 281/547 (51%), Gaps = 22/547 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI  L+IKNG + + +  T LIS F KF     A R     +++  + Y+ ++ G A+  
Sbjct: 62  QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNS 121

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A++ ++R+R   + P  + F+ L++  G    L+    +HG+ +  GF S ++ ++
Sbjct: 122 TLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMT 181

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  +I  A   F      D V++  +V GY  NG   ++ +V ++M+  G + 
Sbjct: 182 AVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKP 241

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L +VL A  D+K    G  IHG+  + GF   V  ++  A+++ Y +CG    A  
Sbjct: 242 DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMV--NVATAMLDTYFKCGSVRSARL 299

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  ++  +VVSW+  I   A   +  EAF  F  +     +    +M+  L +      
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD 359

Query: 292 LRAGKQIQAFC--YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           L  G+ +       K+GF   VS+ N+LISMY KC +V+ A S+F  L  K  V+WN+MI
Sbjct: 360 LERGRYVHRLLDEKKIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMI 417

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY++NG  N+AL++FC M    + P+ +T+ S++ A+++    +QA  +H   I++  L
Sbjct: 418 LGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRT--L 475

Query: 410 LDDSMISC--LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           +D ++  C  LI T+ KC A+  ++++   + +++ +  NA+           EAL+L+ 
Sbjct: 476 MDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFN 535

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +     + N  TF  V+ AC+    +E+G   +  ++K  Y  +  ++   A++D+  +
Sbjct: 536 EMQNGSVKPNEITFLSVIAACSHSGLVEEG-MYYFESMKENYGLEPTMDHYGAMVDLLGR 594

Query: 526 CGTIEDA 532
            G ++DA
Sbjct: 595 AGRLDDA 601


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/762 (30%), Positives = 396/762 (51%), Gaps = 18/762 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L  + G   +  + T L+  +        A R  ++   R+++++ AL+  L+    
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVS 117
              AL+ + ++R  G+  +A  F+++V  CGSL ENE+    V    +  G  ++V + +
Sbjct: 126 LEEALRAYRQMRRDGVPCNANAFATVVSLCGSL-ENEVPGLQVASQVIVSGLQNQVSVAN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +   G +  AE  F    + D +++ AM+  Y   G   K   VF +MR  GL  
Sbjct: 185 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +     SL +V  +S     G  IH   ++    S V   + NA++N+Y   G+  DA  
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT--VINALVNMYSAAGKLSDAEF 302

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  ++  D++SW+  I++    C+  +A      L   +   N  T  + L +      
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 362

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK + A   ++     + +GN+LI+MYGKC  + DA  +F  +   D VS+N +I G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 422

Query: 352 YS--ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSGF 408
           Y+  E+G   +A+ +F  M    + PN  TM +I  + ++S  L      +H++II++GF
Sbjct: 423 YAVLEDG--TKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 480

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           L D+ + + LIT Y KC  L  S  + + I  KN V  NA+ +  V      EAL+L+  
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 540

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +  +++    +  L +CA++  LE+G  +H L +K+  D D +V +A +DMY KCG 
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 600

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +++  +            WN ++ GYA++G + E    F +M   G KPD +T++A+L++
Sbjct: 601 MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSA 660

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGLV +   Y + M+   G+ P ++H  CIVDLLGR+G    A+  I++MP+ P+  
Sbjct: 661 CSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDL 720

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW+SLLS+   + N+++G     KLLEL P ++S YVLLSNLYA+   W DV KLR  MK
Sbjct: 721 IWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMK 780

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
              + K P  SW+ +      F  GD  H  +++IY +L ++
Sbjct: 781 TININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEM 822



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/638 (24%), Positives = 295/638 (46%), Gaps = 29/638 (4%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---- 98
           +R   T+   +SG  R  + G A ++   +R +G+    F  +SLV AC     +E    
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 99  --IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +H +  + G    VY+ +  +  Y   G +  A+  F +  + + V++TA++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFL-SGVCNHL 215
           NG  +++   + +MR  G+  N  +   V+     ++   ++ G  V    + SG+ N +
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLE--NEVPGLQVASQVIVSGLQNQV 180

Query: 216 N--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFN 270
           +  N+++ ++   G+  DA K+FD + E D +SW+  I+  +  G+  + F +F D+R +
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
             + +  T+ +L+S          G  I + C +      V++ NAL++MY   G+++DA
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F  +  +D +SWN+MI+ Y +N     AL     +   +  PN  T +S L A S+ 
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            +L     VH+ +++     +  + + LIT YGKCN++ ++++V   +   + V  N L 
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLI 420

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ-GKAIHCLALKARY 509
                     +A++++  +  +  + N  T   +  + A+  DL   G+ +H   ++  +
Sbjct: 421 GGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 480

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             D +V +++I MY KCG +E +   F  I   ++  WNA++    Q G   E   LF  
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 540

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACIV----D 623
           M   G K D +     L+SC     + E          LHGL  +  L+  + +V    D
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGM-------QLHGLGMKSGLDSDSYVVNAAMD 593

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           + G+ G ++     +    I P    W +L+S    YG
Sbjct: 594 MYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYG 630


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/673 (33%), Positives = 369/673 (54%), Gaps = 22/673 (3%)

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+R D  TF  ++KAC    S+Q+   +HGV  KLGF S V++ +  +  Y   G +   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGLELNEFSLTAVLGASF 190
           +  F + L+ D V++ +++  +  +G + ++  +F EM  RS G   N  S+ +VL    
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRS-GFRPNMVSIVSVLPVCA 120

Query: 191 DVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            +++G    QIH + VK G  S V   + NA++++Y +CG   D+ ++FDEI+E + VSW
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVT--VGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178

Query: 248 SERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           +  I +        D +E F L  D      + N  T  ++L  +   ++   GK+I  F
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMID---GGVKPNSVTFSSMLPVLVELKLFDFGKEIHGF 235

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             + G    + + NALI MY K G+   A ++F+ +  K+ VSWN+M+A +++N     A
Sbjct: 236 SLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAA 295

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +D+   M     IPN  T  ++L A +    L+   ++H+  I++G  +D  + + L   
Sbjct: 296 VDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDM 355

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  LN ++RV  +I  ++ V  N L       +  +E+L L+  +     +++  ++
Sbjct: 356 YAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSY 414

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             V+ ACA +  L+QGK +H LA++      +F+ +A++D Y KCG I+ A + FR+I  
Sbjct: 415 MGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPS 474

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
              A WN+M++GY   G      NLF  M + GV+ D ++Y+AVL++C H GLV E + Y
Sbjct: 475 RDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKY 534

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M  +  + P   HYAC+VDLLGR GL+E A   I+ +PI PDA++W +LL AC I+G
Sbjct: 535 FEHMQ-VQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHG 593

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
            I+L   A   L +L+P +   Y +LSN+YA AG W++  ++RK MK +   K PG SW+
Sbjct: 594 YIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWV 653

Query: 722 HVGGYTHHFYAGD 734
            +    H F AG+
Sbjct: 654 QIDNQVHAFVAGE 666



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 256/508 (50%), Gaps = 24/508 (4%)

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           +G+ L++ +   VL A   S  V++G +IHG   K+GF S V   + N ++  Y  CG  
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDV--FVGNTLLLFYGNCGGL 58

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFND-FQINEYTMINLLSS 285
            D  ++FDE+ E DVVSW+  I   +  G   EA  LF ++     F+ N  +++++L  
Sbjct: 59  KDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPV 118

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
             G      G+QI  +  K G    V++GNAL+ +YGKCG V D+R +FD +  ++ VSW
Sbjct: 119 CAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N++I   +       AL+MF  M++  + PN  T +S+L  +   K      ++H   ++
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G   D  + + LI  Y K     ++  V ++I +KN V  NA+ +          A++L
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            R +       N  TF+ VL ACA +  L  GK IH  A++     D+FV +A+ DMY K
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAK 358

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG +  A+R F+   RD ++ +N +++GY+Q     E   LF +M   G+K D ++Y+ V
Sbjct: 359 CGCLNLARRVFKISLRDEVS-YNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGV 417

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTID 639
           +++C +   +++ +       ++HGL  +   +        ++D   + G ++ A     
Sbjct: 418 ISACANLAALKQGK-------EVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFR 470

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           Q+P   D   W S++    + G + + +
Sbjct: 471 QIP-SRDTASWNSMILGYGMLGELTIAI 497



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/603 (23%), Positives = 286/603 (47%), Gaps = 24/603 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+ ++ K G   D  +  TL+  +      +   R   +   RD++++N++I   +   
Sbjct: 28  EIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHG 87

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
               A+ LF  +  + G RP+  +  S++  C  L++      +H   +K G  S+V + 
Sbjct: 88  FYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVG 147

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K G +  +   F +  + + V++ A++    +      + E+F  M   G++
Sbjct: 148 NALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVK 207

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  + +++L    ++K    G++IHGF ++ G  S +   + NA++++Y + G+ L A 
Sbjct: 208 PNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDI--FVANALIDMYAKSGRSLQAS 265

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F++I E ++VSW+  +A        + A  L + ++ +    N  T  N+L +     
Sbjct: 266 NVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIG 325

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            LR GK+I A   + G    + + NAL  MY KCG +N AR +F  +  +D VS+N +I 
Sbjct: 326 FLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILII 384

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GYS+    +++L +F  M    +  +  +   ++ A +N  +LKQ  +VH   ++     
Sbjct: 385 GYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHT 444

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH--AEALELYRT 468
              + + L+  Y KC  ++ + +V  +I  ++    N++  +L Y        A+ L+  
Sbjct: 445 HLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSM--ILGYGMLGELTIAINLFEA 502

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKC 526
           +     E +  ++  VL AC+    +E+GK    H      +  Q  +  + ++D+  + 
Sbjct: 503 MKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHY--ACMVDLLGRA 560

Query: 527 GTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           G IE+A +    +  +  A  W A++     HG Y E+++ +     F +KP    Y +V
Sbjct: 561 GLIEEAVKLIESLPIEPDANVWGALLGACRIHG-YIELAH-WAAEHLFKLKPQHSGYYSV 618

Query: 586 LTS 588
           L++
Sbjct: 619 LSN 621


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/715 (32%), Positives = 371/715 (51%), Gaps = 24/715 (3%)

Query: 56  LARFCQSGPALKLFDRL-RYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSS 111
           +  FC+ G      + L   Q    D   + S+++ C    S+++   V  +    G   
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI 183

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
              L    +  Y K G++    M F    +     +  M+  Y  +G + +S  +F +M 
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 243

Query: 172 SLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY----- 223
            LG++ N ++ +++L    A   V+EG Q+HG   K+GF S   N + N++++ Y     
Sbjct: 244 ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNS--YNTVVNSLISFYFVGRK 301

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGVEAFGL--FKDLRFNDFQINEYTMI 280
           VRC QKL     FDE+T+ DV+SW+  I+    +G++  G+  F  +      I+  TM+
Sbjct: 302 VRCAQKL-----FDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 356

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIF 339
           N+  +      L  GK + ++  K   ++  V   N L+ MY KCG +N A  +F+ +  
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K  VSW SMI GY   G  + A+ +F  M    ++P+ Y + SIL A + + +LK    V
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H +I ++    +  + + L   Y KC ++ ++  V S + KK+ +  N +       S  
Sbjct: 477 HDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLP 536

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            EAL L+  +    +  +G+T + +L ACA++  L++G+ IH  AL+  Y +D +V +AV
Sbjct: 537 NEALTLFAEMQRESKP-DGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAV 595

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           +DMY KCG +  A+  F  I    L  W  M+ GY  HG   E  N FN+M   G++PDE
Sbjct: 596 VDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDE 655

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           ++++++L +C H+GL+ E     + M     + P LEHYAC+VDLL R G L  A   I 
Sbjct: 656 VSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIK 715

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            MPI PDA IW +LL  C I+ ++ L      ++ EL+P+N   YVLL+N+YA A  W +
Sbjct: 716 AMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEE 775

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           V KLRK++ ++ L K PG SWI + G  + F AGD S  Q+K+I   L +L   M
Sbjct: 776 VQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKM 830



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 305/604 (50%), Gaps = 25/604 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++ S++  +G  +D IL   L+  + K  D +   R +FD      I  +N +IS  +  
Sbjct: 171 RVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEG-RMVFDKLSESKIFLWNLMISEYSGS 229

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLV 116
              G ++ LF ++   G++P+++TFSS++K   A   ++E   VHG+  KLGF+S   +V
Sbjct: 230 GNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVV 289

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y    ++  A+  F +  D D +++ +M+ GYV NG  D+  E+F++M   G++
Sbjct: 290 NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVD 349

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  ++  V  A  ++     G+ +H + +K   L       NN ++++Y +CG    A+
Sbjct: 350 IDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV-RFNNTLLDMYSKCGDLNSAI 408

Query: 234 KMFDEITEPDVVSWSERIA-----AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           ++F+ + E  VVSW+  I         DG  A  LF +++      + Y + ++L++   
Sbjct: 409 RVFERMDEKTVVSWTSMITGYVREGLSDG--AIKLFDEMKSRGVVPDVYAVTSILNACAI 466

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L++GK +  +  +        + NAL  MY KCG + DA  +F ++  KD +SWN+M
Sbjct: 467 NGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTM 526

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY++N   N+AL +F  M   S  P+G T+A IL A ++  +L +  ++H + +++G+
Sbjct: 527 IGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGY 585

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D  + + ++  Y KC  L  ++ +   I  K+ V    + +        +EA+  +  
Sbjct: 586 SEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQ 645

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           +  +  E +  +F  +L AC+    L++G K  + +  + + + ++   + ++D+  + G
Sbjct: 646 MRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTG 705

Query: 528 TIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLA 584
            +  A +  + +  +     W A++ G   H   H+V  L  K+++  F ++P+   Y  
Sbjct: 706 NLVKAHKFIKAMPIKPDATIWGALLCGCRIH---HDV-KLAEKVAERIFELEPENTGYYV 761

Query: 585 VLTS 588
           +L +
Sbjct: 762 LLAN 765


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/736 (32%), Positives = 400/736 (54%), Gaps = 31/736 (4%)

Query: 38  LFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQG----LRPDAFTFSSLVKA-- 90
           +FDT   RD+IT+NAL+S  A+         LF  + +      LRP+  TF SL+ A  
Sbjct: 221 VFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATS 280

Query: 91  ---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
              C S   +++   V LK G SS +Y+ S  +  +A+ G +  A+  F +  + + V  
Sbjct: 281 LSSCSSGVLDQVFARV-LKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTL 339

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDVKE-----GEQIHGF 201
             ++ G V     +++  +F+  R S  +  + F +     A F + E     G ++HG 
Sbjct: 340 NGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGH 399

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA-----CD 256
            ++ G +  +   L+N ++N+Y +CG    A ++F  +   D VSW+  I+       C+
Sbjct: 400 ILRTGLID-LKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCE 458

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
           G  A   +  +R      + +  I+ LSS    R+L AG+Q+     K G     S+ NA
Sbjct: 459 G--AMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNA 516

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA-GYSENGFFNQALDMFCHMLEFSLIP 375
           L+ MYG CG  +++  IF+ +   D VSWNS++    S +    +++++F +M+   L P
Sbjct: 517 LVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTP 576

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N  T  ++L A+S    L+   QVH+ ++K G + D+++ + L++ Y K   ++  +++ 
Sbjct: 577 NKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLF 636

Query: 436 SEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
           S +  +++AV  N++ S  +Y     E ++    +  S + ++  TFSIVL ACA++  L
Sbjct: 637 SSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAAL 696

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           E+G  +H   ++++ + D+ VESA++DMY KCG I+ A + F  + + +   WN+M+ GY
Sbjct: 697 ERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGY 756

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A+HG   +   +F +M + G  PD +T+++VL++C HAGLV     Y   M D HG++P 
Sbjct: 757 ARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED-HGILPH 815

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN---IDLGLLAGS 671
           +EHY+C++DLLGR G L   +  I++MP+ P+  IW+++L AC    +   IDLG  A  
Sbjct: 816 IEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASR 875

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
            LLEL+P N   YVL SN YA+ G W D  K R  M    + KE G SW+ +G   H F 
Sbjct: 876 MLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFI 935

Query: 732 AGDSSHSQSKEIYKEL 747
           AGD SH  +KEIY++L
Sbjct: 936 AGDRSHPNTKEIYEKL 951



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 176/707 (24%), Positives = 333/707 (47%), Gaps = 56/707 (7%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGP 64
           L+K G   D  LS  L++ + K +    A R +FD    R+ +++  L+SG      +  
Sbjct: 82  LVKRGLTHDLFLSNHLVNLYAKGSRLAAA-RQVFDGMLERNAVSWTCLVSGYVLSGITDE 140

Query: 65  ALKLFDRLRYQGL---RPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLV 116
           A ++F  + ++G    RP  FTF S+++AC     + +     VHG+  K  ++S   + 
Sbjct: 141 AFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVC 200

Query: 117 SGFIENYAKS--GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM---- 170
           +  I  Y     G  + A+  F      D + + A++  Y   G    +  +F+ M    
Sbjct: 201 NALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDD 260

Query: 171 RSLGLELNEFSLTAVLGAS--FDVKEG--EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
            ++ L  NE +  +++ A+       G  +Q+    +K G  S +  ++ +A+++ + R 
Sbjct: 261 SAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDL--YVGSALVSAFARH 318

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
           G   +A  +F  + E + V+ +  I          EA G+F   R + F +N  T + LL
Sbjct: 319 GMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFVVNTDTFVVLL 377

Query: 284 SSVG----GERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLI 338
           S+V      E  L  G+++     + G +++ +++ N L++MY KCG ++ A  +F  L 
Sbjct: 378 SAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLC 437

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D VSWN++I+   +NGF   A+  +C M +  + P+ +   S L + ++ + L    Q
Sbjct: 438 ARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQ 497

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA-S 457
           VH   +K G  LD S+ + L+  YG C A +ES  + + + + + V  N++  V+V + +
Sbjct: 498 VHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHA 557

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
             AE++E++  +  S    N  TF  +L A + ++ LE GK +H + LK    +D  V++
Sbjct: 558 PTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDN 617

Query: 518 AVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
           A++  Y K G ++  ++ F  +   RD+++ WN+M+ GY  +G   E  +    M     
Sbjct: 618 ALMSCYAKSGDMDSCEQLFSSMSGRRDAVS-WNSMISGYIYNGHLQETMDCVWLMMHSNQ 676

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH--GLIPQLEH----YACIVDLLGRVG 629
             D  T+  VL +C     +           ++H  G+  QLE      + ++D+  + G
Sbjct: 677 MLDCCTFSIVLNACASVAALERGM-------EMHAFGIRSQLESDVVVESALLDMYSKCG 729

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
            ++ A    + M    +   W S++S    +G        G K LE+
Sbjct: 730 RIDYASKVFNSMS-QKNEFSWNSMISGYARHG-------LGEKALEI 768



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 258/520 (49%), Gaps = 33/520 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K+G   D  + + L+S F +      A     + + R+ +T N LI GL +  
Sbjct: 291 QVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQH 350

Query: 61  QSGPALKLFDRLRYQGLRPDAF-----TFSSLVKACG--SLQENEI-----VHGVCLKLG 108
            S  A+ +F      G R D+F     TF  L+ A    S+ E+ +     VHG  L+ G
Sbjct: 351 CSEEAVGIF-----MGTR-DSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTG 404

Query: 109 FSS-RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
               ++ L +G +  YAK G I  A   FR     D V++  ++     NG  + +   +
Sbjct: 405 LIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNY 464

Query: 168 VEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
             MR   +  + F+  + L +   ++    G+Q+H   VK G    +   ++NA++ +Y 
Sbjct: 465 CMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGL--DLDTSVSNALVKMYG 522

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSE----RIAAACDGVEAFGLFKDLRFNDFQINEYTMI 280
            CG + ++ ++F+ + E D+VSW+      +++     E+  +F ++  +    N+ T +
Sbjct: 523 DCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFV 582

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-F 339
           NLLS++    +L  GKQ+ A   K G +E  ++ NAL+S Y K G ++    +F  +   
Sbjct: 583 NLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGR 642

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +D+VSWNSMI+GY  NG   + +D    M+  + + +  T + +L A ++  +L++ M++
Sbjct: 643 RDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEM 702

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H+  I+S    D  + S L+  Y KC  ++ + +V + + +KN    N++ S        
Sbjct: 703 HAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLG 762

Query: 460 AEALELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQG 497
            +ALE++  +   G+C +    TF  VL AC+    +++G
Sbjct: 763 EKALEIFEEMQRNGACPD--HVTFVSVLSACSHAGLVDRG 800



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 151/608 (24%), Positives = 286/608 (47%), Gaps = 42/608 (6%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L+   G     E +H   +K G +  ++L +  +  YAK   + +A   F   L+ + V+
Sbjct: 65  LLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVS 124

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE---FSLTAVLGASFDVKE-----GEQI 198
           +T +V GYV +G  D++  VF  M   G E +    F+  +VL A  D          Q+
Sbjct: 125 WTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQV 184

Query: 199 HGFGVKVGFLSG--VCNHLNNAIMNLYVRC--GQKLDAVKMFDEITEPDVVSWSERIAA- 253
           HG   K  + S   VC    NA++++Y  C  G  L A ++FD     D+++W+  ++  
Sbjct: 185 HGLVSKTIYASNTTVC----NALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVY 240

Query: 254 ACDG--VEAFGLFKDLRFNDFQI----NEYTMINLLSSVG----GERILRAGKQIQAFCY 303
           A  G  V  F LF  +  +D  I    NE+T  +L+++         +L    Q+ A   
Sbjct: 241 AKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVL---DQVFARVL 297

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K G    + +G+AL+S + + G +++A+ IF  L  +++V+ N +I G  +     +A+ 
Sbjct: 298 KSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVG 357

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSN----SKSLKQAMQVHSHIIKSGFL-LDDSMISCL 418
           +F    + S + N  T   +L AV+        L +  +VH HI+++G + L  ++ + L
Sbjct: 358 IFMGTRD-SFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGL 416

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC A++++ RV   +  ++ V  N + SVL        A+  Y  +   C  ++ 
Sbjct: 417 VNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGC--ISP 474

Query: 479 STFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           S F+ +  L +CA++  L  G+ +HC A+K   D D  V +A++ MY  CG   ++   F
Sbjct: 475 SNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIF 534

Query: 537 RKICRDSLAGWNAMM-MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
             +    +  WN++M +  + H    E   +F+ M + G+ P+++T++ +L++     ++
Sbjct: 535 NSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVL 594

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
              +   + +   HG I        ++    + G ++  +     M    DA  W S++S
Sbjct: 595 ELGKQVHAVVLK-HGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMIS 653

Query: 656 ACTIYGNI 663
                G++
Sbjct: 654 GYIYNGHL 661


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/759 (31%), Positives = 394/759 (51%), Gaps = 18/759 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            I++L  + G   +  + T L+  +        A R  ++   R+++++ AL+  L+    
Sbjct: 368  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 427

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVS 117
               AL+ + ++R  G+  +A  F+++V  CGSL ENE+    V    +  G  ++V + +
Sbjct: 428  LEEALRAYRQMRRDGVPCNANAFATVVSLCGSL-ENEVPGLQVASQVIVSGLQNQVSVAN 486

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I  +   G +  AE  F    + D +++ AM+  Y   G   K   VF +MR  GL  
Sbjct: 487  SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 546

Query: 178  NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +     SL +V  +S     G  IH   ++    S V   + NA++N+Y   G+  DA  
Sbjct: 547  DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT--VINALVNMYSAAGKLSDAEF 604

Query: 235  MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            +F  ++  D++SW+  I++    C+  +A      L   +   N  T  + L +      
Sbjct: 605  LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L  GK + A   ++     + +GN+LI+MYGKC  + DA  +F  +   D VS+N +I G
Sbjct: 665  LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 724

Query: 352  YS--ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSGF 408
            Y+  E+G   +A+ +F  M    + PN  TM +I  + ++S  L      +H++II++GF
Sbjct: 725  YAVLEDG--TKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 782

Query: 409  LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            L D+ + + LIT Y KC  L  S  + + I  KN V  NA+ +  V      EAL+L+  
Sbjct: 783  LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFID 842

Query: 469  IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
            +  +  +++    +  L +CA++  LE+G  +H L +K+  D D +V +A +DMY KCG 
Sbjct: 843  MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 902

Query: 529  IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            +++  +            WN ++ GYA++G + E    F +M   G KPD +T++A+L++
Sbjct: 903  MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSA 962

Query: 589  CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
            C HAGLV +   Y + M+   G+ P ++H  CIVDLLGR+G    A+  I++MP+ P+  
Sbjct: 963  CSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDL 1022

Query: 649  IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            IW+SLLS+   + N+++G     KLLEL P ++S YVLLSNLYA+   W DV KLR  MK
Sbjct: 1023 IWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMK 1082

Query: 709  EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
               + K P  SW+ +      F  GD  H  +++IY +L
Sbjct: 1083 TININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKL 1121



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/644 (24%), Positives = 296/644 (45%), Gaps = 30/644 (4%)

Query: 38  LFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD   +R   T+   +SG  R    G A ++   +R  G+    F  +SLV AC     
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 97  NE------IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
           +E       +H +  + G    VY+ +  +  Y   G +  A+  F +  + + V++TA+
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFL-S 209
           +     NG  +++   + +MR  G+  N  +   V+     ++   ++ G  V    + S
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLE--NEVPGLQVASQVIVS 476

Query: 210 GVCNHLN--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF 264
           G+ N ++  N+++ ++   G+  DA K+FD + E D +SW+  I+  +  G+  + F +F
Sbjct: 477 GLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVF 536

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
            D+R +  + +  T+ +L+S          G  I + C +      V++ NAL++MY   
Sbjct: 537 SDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAA 596

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G+++DA  +F  +  +D +SWN+MI+ Y +N     AL     +   +  PN  T +S L
Sbjct: 597 GKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSAL 656

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A S+  +L     VH+ +++     +  + + LIT YGKCN++ ++++V   +   + V
Sbjct: 657 GACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 716

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ-GKAIHCL 503
             N L           +A++++  +  +  + N  T   +  + A+  DL   G+ +H  
Sbjct: 717 SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAY 776

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
            ++  +  D +V +++I MY KCG +E +   F  I   ++  WNA++    Q G   E 
Sbjct: 777 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEA 836

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACI 621
             LF  M   G K D +     L+SC     + E          LHGL  +  L+  + +
Sbjct: 837 LKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGM-------QLHGLGMKSGLDSDSYV 889

Query: 622 V----DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           V    D+ G+ G ++     +    I P    W +L+S    YG
Sbjct: 890 VNAAMDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYG 932



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 128/654 (19%), Positives = 269/654 (41%), Gaps = 67/654 (10%)

Query: 38  LFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD   +R   T+   +SG  R  + G A ++   +R +G+    F  +SLV AC     
Sbjct: 76  LFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGR 135

Query: 97  NE------IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
           +E       +H +  + G    VY+    +            ++  R+ LD  +++ ++ 
Sbjct: 136 DEGIACGAAIHALTHRAGLMGNVYIGRALLH---------LPQIRRREALDAVSLSPSSA 186

Query: 151 --VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQ----------- 197
               G+        +         L L  N + L A + + +                  
Sbjct: 187 HPAAGHPPPSHPPAAATPPPRHHFLLLPRNHYRLHATMPSIYSRPPRRPPAPGRRGVPAR 246

Query: 198 --------------IHGFGVKVGFLSGVCNHLNNAIMNLYVR---CGQKLDAVKMFDEIT 240
                         IHG  V++       +   N ++  Y R         A+ +FDE+ 
Sbjct: 247 RLLPPRRPPLLARAIHGLAVRLALPLSAFH--RNTLLAFYFRQRDASAAAAALHLFDEMA 304

Query: 241 EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV---GGERILRA 294
           +    +W   ++         +AF + + +R     ++ + + +L+++    G +  +  
Sbjct: 305 DRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIAC 364

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G  I A  ++ G M  V IG AL+ +YG  G V+DA+ +F  +  ++ VSW +++   S 
Sbjct: 365 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 424

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG+  +AL  +  M    +  N    A+++    + ++    +QV S +I SG     S+
Sbjct: 425 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 484

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + LIT +G    +++++++   +++ + +  NA+ S+  +    ++   ++  +     
Sbjct: 485 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             + +T   ++  CA+      G  IH L L++  D  + V +A+++MY   G + DA+ 
Sbjct: 545 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 604

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  + R  L  WN M+  Y Q+    +      ++      P+ +T+ + L +C   G 
Sbjct: 605 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664

Query: 595 VREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMP 642
           + + +        +H ++ QL           ++ + G+   +E A+     MP
Sbjct: 665 LIDGKM-------VHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 711


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/772 (30%), Positives = 398/772 (51%), Gaps = 35/772 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +    +I+ ++K  D  +A  F      RD++++N+++SG  +  +S  ++++F  + 
Sbjct: 71  DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+  D  TF+ ++K C  L++  +   +HG+ +++G  + V   S  ++ YAK    V
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 190

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---G 187
            +   F+   + ++V+++A++ G V N     + + F EM+ +   +++    +VL    
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250

Query: 188 ASFDVKEGEQIHGFGVKVGFLS-GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           A  +++ G Q+H   +K  F + G+   +  A +++Y +C    DA  +FD     +  S
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGI---VRTATLDMYAKCDNMQDAQILFDNSENLNRQS 307

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           ++  I        G +A  LF  L  +    +E ++  +  +    + L  G QI     
Sbjct: 308 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 367

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K      V + NA I MYGKC  + +A  +FD +  +D+VSWN++IA + +NG   + L 
Sbjct: 368 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 427

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  ML   + P+ +T  SIL+A +   SL   M++HS I+KSG   + S+   LI  Y 
Sbjct: 428 LFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 424 KCNALNESKRV-------------LSEIDKKN-------AVHINALASVLVYASCHAEAL 463
           KC  + E++++             + E++K +        V  N++ S  V      +A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +       +  T++ VL  CA +     GK IH   +K     D+++ S ++DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 606

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG + D++  F K  R     WNAM+ GYA HG   E   LF +M    +KP+ +T++
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L +C H GL+ +   Y   M   +GL PQL HY+ +VD+LG+ G ++ A   I +MP 
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726

Query: 644 PPDAHIWQSLLSACTIY-GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             D  IW++LL  CTI+  N+++   A + LL L P + S Y LLSN+YA AGMW  V  
Sbjct: 727 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 786

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           LR+ M+   L KEPG SW+ +    H F  GD +H + +EIY+EL  +Y  M
Sbjct: 787 LRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 838



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 180/670 (26%), Positives = 312/670 (46%), Gaps = 77/670 (11%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-----RDCLDL---- 142
           G+L+  +  H   +  GF    ++++  ++ Y  S + VSA M F     RD +      
Sbjct: 20  GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 79

Query: 143 ----------------------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
                                 D V++ +M+ GY+ NGE  KS EVFV+M   G+E +  
Sbjct: 80  NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR 139

Query: 181 SLTAVLGA-SF--DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +   +L   SF  D   G QIHG  V+VG  + V     +A++++Y +  + ++++++F 
Sbjct: 140 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVV--AASALLDMYAKGKRFVESLRVFQ 197

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            I E + VSWS  IA          A   FK+++  +  +++    ++L S      LR 
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS- 353
           G Q+ A   K  F     +  A + MY KC  + DA+ +FD     +  S+N+MI GYS 
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317

Query: 354 -ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            E+GF  +AL +F  ++   L  +  +++ +  A +  K L + +Q++   IKS   LD 
Sbjct: 318 EEHGF--KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + +  I  YGKC AL E+ RV  E+ +++AV  NA+ +         E L L+ ++  S
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             E +  TF  +LKAC   + L  G  IH   +K+    +  V  ++IDMY KCG IE+A
Sbjct: 436 RIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494

Query: 533 KRAF-RKICRDSLAG-------------------WNAMMMGYAQHGCYHEVSNLFNKMSK 572
           ++   R   R +++G                   WN+++ GY       +   LF +M +
Sbjct: 495 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554

Query: 573 FGVKPDEITYLAVLTSCCH---AGLVREARTYLSCMSDLHGLIPQLEHYAC--IVDLLGR 627
            G+ PD+ TY  VL +C +   AGL ++    +    +L     Q + Y C  +VD+  +
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQV-IKKEL-----QSDVYICSTLVDMYSK 608

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVL 686
            G L  +++  ++  +  D   W +++     +G  +  + L    +LE    N  T++ 
Sbjct: 609 CGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 667

Query: 687 LSNLYASAGM 696
           +    A  G+
Sbjct: 668 ILRACAHMGL 677



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 270/569 (47%), Gaps = 33/569 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ ++++ G   D + ++ L+  + K   F  + R       ++ ++++A+I+G  +  
Sbjct: 159 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ALK F  ++          ++S++++C +L E  +   +H   LK  F++   + +
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 278

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +  A++ F +  +L+  +Y AM+ GY       K+  +F  + S GL  
Sbjct: 279 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 338

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+ V  A   VK   EG QI+G  +K      VC  + NA +++Y +C    +A +
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC--VANAAIDMYGKCQALAEAFR 396

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE+   D VSW+  IAA      G E   LF  +  +  + +E+T  ++L +  G   
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS- 455

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--------- 342
           L  G +I +   K G     S+G +LI MY KCG + +A  I      + +         
Sbjct: 456 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 515

Query: 343 -----------VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
                      VSWNS+I+GY        A  +F  M+E  + P+ +T A++L+  +N  
Sbjct: 516 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 575

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           S     Q+H+ +IK     D  + S L+  Y KC  L++S+ +  +  +++ V  NA+  
Sbjct: 576 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 635

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYD 510
              +     EA++L+  +     + N  TF  +L+ACA M  +++G +  + +      D
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 695

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             +   S ++D+  K G ++ A    R++
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREM 724



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 171/380 (45%), Gaps = 32/380 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QIY L IK+   LD  ++   I  + K      AFR   + + RD +++NA+I+   +  
Sbjct: 361 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           +    L LF  +    + PD FTF S++KAC  GSL     +H   +K G +S   +   
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 480

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN--------------------VAYTAMVCGYVWNG 158
            I+ Y+K G I  AE          N                    V++ +++ GYV   
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 540

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
           + + ++ +F  M  +G+  ++F+   VL    ++     G+QIH   +K    S V  ++
Sbjct: 541 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV--YI 598

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDF 272
            + ++++Y +CG   D+  MF++    D V+W+  I   A    G EA  LF+ +   + 
Sbjct: 599 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 658

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDAR 331
           + N  T I++L +     ++  G +      +  G    +   + ++ + GK G+V  A 
Sbjct: 659 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718

Query: 332 SIFDYLIFK-DSVSWNSMIA 350
            +   + F+ D V W +++ 
Sbjct: 719 ELIREMPFEADDVIWRTLLG 738


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/757 (29%), Positives = 405/757 (53%), Gaps = 12/757 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + K+G   D  +ST ++  +  +     + +   +  +R+++++ +L+ G +   
Sbjct: 80  QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    + ++  +R +G+  +  + S ++ +CG L++  +   + G  +K G  S++ + +
Sbjct: 140 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 199

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I      G +  A   F    + D +++ ++   Y  NG  ++S  +F  MR    E+
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259

Query: 178 NEFS---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   L +VLG     K G  IHG  VK+GF S VC  + N ++ +Y   G+ ++A  
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC--VCNTLLRMYAGAGRSVEANL 317

Query: 235 MFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   D++SW+  +A+   DG  ++A GL   +  +   +N  T  + L++      
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G+ +       G      IGNAL+SMYGK G+++++R +   +  +D V+WN++I G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFLL 410
           Y+E+   ++AL  F  M    +  N  T+ S+L A +     L++   +H++I+ +GF  
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D+ + + LIT Y KC  L+ S+ + + +D +N +  NA+ +   +     E L+L   + 
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                ++  +FS  L A A +  LE+G+ +H LA+K  ++ D F+ +A  DMY KCG I 
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +  +        SL  WN ++    +HG + EV   F++M + G+KP  +T++++LT+C 
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV +   Y   ++   GL P +EH  C++DLLGR G L  A+  I +MP+ P+  +W
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLL++C I+GN+D G  A   L +L+P+++S YVL SN++A+ G W DV  +RK+M  K
Sbjct: 738 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 797

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            + K+   SW+ +      F  GD +H Q+ EIY +L
Sbjct: 798 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 194/688 (28%), Positives = 332/688 (48%), Gaps = 48/688 (6%)

Query: 25  FTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFT 83
           +TKF   + A R LFD    R+ +++N ++SG+ R       ++ F ++   G++P +F 
Sbjct: 2   YTKFGRVKPA-RHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 84  FSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
            +SLV ACG      +E   VHG   K G  S VY+ +  +  Y   G +  +   F + 
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GE 196
            D + V++T+++ GY   GE ++  +++  MR  G+  NE S++ V+ +   +K+   G 
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-AC 255
           QI G  VK G  S +   + N+++++    G    A  +FD+++E D +SW+   AA A 
Sbjct: 181 QIIGQVVKSGLESKLA--VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238

Query: 256 DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           +G   E+F +F  +R    ++N  T+  LLS +G     + G+ I     K+GF  VV +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N L+ MY   G+  +A  +F  +  KD +SWNS++A +  +G    AL + C M+    
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             N  T  S L A       ++   +H  ++ SG   +  + + L++ YGK   ++ES+R
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           VL ++ +++ V  NAL           +AL  ++T+       N  T   VL AC    D
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478

Query: 494 -LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            LE+GK +H   + A ++ D  V++++I MY KCG +  ++  F  +   ++  WNAM+ 
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLA 538

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE--------------- 597
             A HG   EV  L +KM  FGV  D+ ++   L++     ++ E               
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598

Query: 598 --------ARTYLSC--MSDLHGLIP-----QLEHYACIVDLLGRVGLLEGAKMTID--- 639
                   A  Y  C  + ++  ++P      L  +  ++  LGR G  E    T     
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           +M I P    + SLL+AC+  G +D GL
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGL 686



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 204/447 (45%), Gaps = 26/447 (5%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSE------RIAAACDGVEAFGLFKDLRFNDFQIN 275
           +Y + G+   A  +FD +   + VSW+       R+    +G+E F    DL     + +
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL---GIKPS 57

Query: 276 EYTMINLLSSVGGE-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
            + + +L+++ G    + R G Q+  F  K G +  V +  A++ +YG  G V+ +R +F
Sbjct: 58  SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           + +  ++ VSW S++ GYS+ G   + +D++  M    +  N  +M+ ++ +    K   
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              Q+   ++KSG     ++ + LI+  G    ++ +  +  ++ +++ +  N++A+   
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 E+  ++  +     EVN +T S +L     +   + G+ IH L +K  +D  + 
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V + ++ MY   G   +A   F+++    L  WN++M  +   G   +   L   M   G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI-------PQLEHYACIVDLLGR 627
              + +T+ + L +C       + R        LHGL+        Q+   A +V + G+
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRI-------LHGLVVVSGLFYNQIIGNA-LVSMYGK 409

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           +G +  ++  + QMP   D   W +L+
Sbjct: 410 IGEMSESRRVLLQMP-RRDVVAWNALI 435


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/755 (30%), Positives = 385/755 (50%), Gaps = 17/755 (2%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKL 68
           H D +   T+++ +    D   A        + D++++N LISG   +CQ G    ++ L
Sbjct: 82  HRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISG---YCQHGMFRNSVGL 138

Query: 69  FDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAK 125
              +  +G+  D  T + L+K+CG L +  +   +H + +K G  + V   S  ++ Y K
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
              +  A   F    + ++V++ A + G V N ++ +  E+FV+M+ LGL +++ +  + 
Sbjct: 199 CRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASA 258

Query: 186 L---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
                A   +    Q+H   +K  F S     +  AI+++Y + G  +DA + F  +   
Sbjct: 259 FRSCAAMPCLSTARQLHAHAIKNVFSSD--RVVGTAIVDVYAKAGNLVDARRAFIGLPHH 316

Query: 243 DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           +V + +  +        G EA  LF+ +  +    +  ++  + S+    +    G Q+ 
Sbjct: 317 NVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVH 376

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
               K GF   V + NA++ +YGKC  + +A  +F  +  +DSVSWN++IA   +N  + 
Sbjct: 377 CLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 436

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
             +     ML   + P+ +T  S+L+A +  +SL+  + VH   IKSG  LD  + S ++
Sbjct: 437 DTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVV 496

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC A+ E++++   I  +  V  N++ S         EA   +  +     + +  
Sbjct: 497 DMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHF 556

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T++ VL  CA +  +E GK IH   +K     D ++ S ++DMY KCG + D+   F K 
Sbjct: 557 TYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA 616

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
            +     WNAM+ GYA HG   E   +F +M +  V P+  T++AVL +C H GL+ +  
Sbjct: 617 RKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGC 676

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            Y   M+  + L+PQLEH+AC+VD+LGR    + A   I  MPI  DA +W++LLS C I
Sbjct: 677 QYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKI 736

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
             ++++   A S +L L PD+ S Y+LLSN+YA +G W DV + R+ M++  L KEPG S
Sbjct: 737 RQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCS 796

Query: 720 WIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           WI V    H F  GD  H +SKE+Y+ L  L   M
Sbjct: 797 WIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEM 831



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 214/449 (47%), Gaps = 39/449 (8%)

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-- 237
           + L A  G S  +  G+  H   +  GF+      ++N ++ +Y RCG    A  +FD  
Sbjct: 24  YQLCASAGRS-ALTTGQAAHARMLVSGFMP--TTFVSNCLLQMYARCGGTAHAHGVFDTM 80

Query: 238 -----------------------------EITEPDVVSWSERIAAACD-GV--EAFGLFK 265
                                         + +PDVVSW+  I+  C  G+   + GL  
Sbjct: 81  PHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSM 140

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           ++      ++  T+  LL S GG   L  G QI A   K G    V  G+AL+ MYGKC 
Sbjct: 141 EMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCR 200

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            ++DA   F  +  ++SVSW + IAG  +N  + + +++F  M    L  +    AS   
Sbjct: 201 SLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFR 260

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           + +    L  A Q+H+H IK+ F  D  + + ++  Y K   L +++R    +   N   
Sbjct: 261 SCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVET 320

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            NA+   LV     AEA++L++ +  S    +  + S V  ACA +    QG  +HCLA+
Sbjct: 321 CNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAV 380

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+ +D D+ V +A++D+Y KC  + +A   F+++ +     WNA++    Q+ CY +   
Sbjct: 381 KSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIA 440

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
             N+M + G++PD+ TY +VL +C  AGL
Sbjct: 441 HLNEMLRSGMEPDDFTYGSVLKAC--AGL 467



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 245/506 (48%), Gaps = 11/506 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K G   D    + L+  + K      A RF      R+ +++ A I+G  +  
Sbjct: 172 QIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNE 231

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    ++LF +++  GL      ++S  ++C +   L     +H   +K  FSS   + +
Sbjct: 232 QYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGT 291

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+G +V A   F      +     AM+ G V  G   ++ ++F  M   G+  
Sbjct: 292 AIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGF 351

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL+ V  A  +VK   +G Q+H   VK GF   VC  + NAI++LY +C   ++A  
Sbjct: 352 DVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVC--VRNAILDLYGKCKALVEAYL 409

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F E+ + D VSW+  IAA        +      ++  +  + +++T  ++L +  G + 
Sbjct: 410 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQS 469

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G  +     K G      + + ++ MY KCG + +A+ + D +  ++ VSWNS+I+G
Sbjct: 470 LEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISG 529

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +S      +A   F  ML+  + P+ +T A++L+  +N  +++   Q+H  IIK   L D
Sbjct: 530 FSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGD 589

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           + + S L+  Y KC  + +S  +  +  K + V  NA+           EALE++  +  
Sbjct: 590 EYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQR 649

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQG 497
           +    N +TF  VL+AC+ +  L+ G
Sbjct: 650 ANVVPNHATFVAVLRACSHVGLLDDG 675



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 212/442 (47%), Gaps = 14/442 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  IKN    D ++ T ++  + K  +   A R      + ++ T NA++ GL R  
Sbjct: 273 QLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTG 332

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               A++LF  +   G+  D  + S +  AC  ++   +   VH + +K GF   V + +
Sbjct: 333 LGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRN 392

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   +V A + F++    D+V++ A++     N  ++ +     EM   G+E 
Sbjct: 393 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEP 452

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++F+  +VL A   ++    G  +HG  +K G   G+   +++ ++++Y +CG   +A K
Sbjct: 453 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGL--GLDAFVSSTVVDMYCKCGAITEAQK 510

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           + D I   ++VSW+  I+         EA   F ++     + + +T   +L +      
Sbjct: 511 LHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLAT 570

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQI     K   +    I + L+ MY KCG + D+  +F+     D VSWN+MI G
Sbjct: 571 IELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICG 630

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ +G   +AL+MF  M   +++PN  T  ++L A S+   L    Q + H++ S + L 
Sbjct: 631 YALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQ-YFHLMTSRYKLV 689

Query: 412 DSM--ISCLITTYGKCNALNES 431
             +   +C++   G+     E+
Sbjct: 690 PQLEHFACMVDILGRSKGPQEA 711



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 182/410 (44%), Gaps = 43/410 (10%)

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +  G   L  G+   A     GFM    + N L+ MY +CG    A  +FD +  +D+
Sbjct: 26  LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85

Query: 343 VSWNSM-------------------------------IAGYSENGFFNQALDMFCHMLEF 371
           VSWN+M                               I+GY ++G F  ++ +   M   
Sbjct: 86  VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            +  +  T+A +L++      L   +Q+H+  +K+G   D    S L+  YGKC +L+++
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            R    + ++N+V   A  +  V    +   +EL+  +      V+   ++   ++CAAM
Sbjct: 206 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAM 265

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             L   + +H  A+K  +  D  V +A++D+Y K G + DA+RAF  +   ++   NAMM
Sbjct: 266 PCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMM 325

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS-----CMS 606
           +G  + G   E   LF  M++ GV  D I+   V ++C       E + Y       C++
Sbjct: 326 VGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACA------EVKGYFQGLQVHCLA 379

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              G    +     I+DL G+   L  A +   +M    D+  W ++++A
Sbjct: 380 VKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 428


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/675 (33%), Positives = 364/675 (53%), Gaps = 13/675 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C S++E   +  + +K G  +     +  +  ++K G I  A   F    D  +  
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           Y  M+ GY  N   + +      MR   ++   ++ T +L   G + D+K G++IHG  +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFG 262
              F + V       ++N+Y +C Q  DA KMFD + E D+VSW+  IA  + +G     
Sbjct: 175 TNSFAANV--FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232

Query: 263 LFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           L   LR  D   + +  T++ +L +     +L  GK I  +  + GF ++V+I  AL  M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG V  AR IFD +  K  VSWNSM+ GY +NG   +A+ +F  MLE  + P G T+
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
              L A ++   L++   VH  + +     D S+++ LI+ Y KC  ++ +  + + ++ 
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 441 KNAVHINALASVLVYASCH--AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           +  V  NA+  +L YA     +EAL  +  +     + +  T   V+ A A ++     K
Sbjct: 413 RTHVSWNAM--ILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH L +++  D++IFV +A++DMY KCG I  A++ F  I    +  WNAM+ GY  HG
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
                 +LF+KM K  V+P++ITYL+V+++C H+GLV E   +   M   +GL P ++HY
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHY 590

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
             +VDLLGR G ++ A   I+ MPI P   ++ ++L AC I+ NI++G  A  KL EL P
Sbjct: 591 GAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNP 650

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           D    +VLL+N+YAS   W+ V ++RK M++K L K PG S + +    H FY+G ++H 
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710

Query: 739 QSKEIYKELIKL-YE 752
           QSK IY  L +L YE
Sbjct: 711 QSKRIYAFLEELVYE 725



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 271/543 (49%), Gaps = 14/543 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI  L+IKNG + + +  T L+S F+K+     A R      ++    Y+ ++ G A+  
Sbjct: 67  QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL    R+RY  ++P  + F+ L+K CG    L+  + +HG  +   F++ V+ ++
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  YAK  +I  A   F    + D V++  ++ G+  NG   K+ E+ + M+  G   
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L  VL A+ DV     G+ IHG+ ++ GF   V  +++ A+ ++Y +CG    A  
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLV--NISTALADMYSKCGSVETARL 304

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + +  VVSW+  +       E   A  +F+ +          T++  L +      
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK +  F  ++     +S+ N+LISMY KC +V+ A  IF+ L  +  VSWN+MI G
Sbjct: 365 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILG 424

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++NG  ++AL+ F  M    + P+ +TM S++ A++     + A  +H  II+S    +
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKN 484

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC A++ ++++   I  ++ +  NA+            AL+L+  +  
Sbjct: 485 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK 544

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
              E N  T+  V+ AC+    +++G   H  ++K  Y  +  ++   A++D+  + G I
Sbjct: 545 GAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603

Query: 530 EDA 532
           ++A
Sbjct: 604 KEA 606


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/670 (32%), Positives = 361/670 (53%), Gaps = 11/670 (1%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SLQ+ + +H   +K   SS VY+ +  +  YAK   +  A+  F    + D V++  ++ 
Sbjct: 21  SLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 153 GYVWNGEFDKSK--EVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGF 207
           GY  +G    S   E+F  MR+     N  +   V  A+    D   G   H   +K+  
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLF 264
              V   + +++MN+Y + G   +A K+FD + E + VSW+  I+         EA GLF
Sbjct: 140 CRDV--FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + +R  +   NE+   ++LS++    ++  GKQI     K G + +VS+GNAL++MY KC
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G ++DA   F+    K+S++W++MI GY+++G  ++AL +F  M    + P+ +T   ++
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A S+  +  +  QVH +++K GF     +++ L+  Y KC+++ ++++    + + + V
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIV 377

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              ++    V    + +AL LY  +       N  T + VLKAC+++  LEQGK IH   
Sbjct: 378 LWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHART 437

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K  +  ++ + SA+  MY KCG ++D    FR++    +  WNAM+ G +Q+GC  E  
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEAL 497

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF +M   G KPD +T++ +L++C H GLV     Y   M D  G+ P++EHYAC+VD+
Sbjct: 498 ELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDI 557

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           L R G L+ A    +   I     +W+ +L AC  Y N +LG  AG KL+EL     S Y
Sbjct: 558 LSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAY 617

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VLLS++Y++ G W DV ++R+ MK + + KEPG SWI +    H F   D  H Q  +I+
Sbjct: 618 VLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIH 677

Query: 745 KELIKLYEHM 754
            EL +L + M
Sbjct: 678 VELRQLSKQM 687



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 171/592 (28%), Positives = 294/592 (49%), Gaps = 38/592 (6%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPA--LKLFDRLR 73
           ++ +L++ + K    R A +F+F+  QN+D++++N +I+G ++   SG +  ++LF R+R
Sbjct: 42  IANSLVNLYAKCQRLREA-KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMR 100

Query: 74  YQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +   P+A TF+ +  A  +L +     + H V +K+     V++ S  +  Y K+G   
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTP 160

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A   F    + ++V++  M+ GY       ++  +F  MR      NEF  T+VL A  
Sbjct: 161 EARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               V  G+QIH   VK G LS V   + NA++ +Y +CG   DA++ F+  ++ + ++W
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVS--VGNALVTMYAKCGSLDDALQTFETSSDKNSITW 278

Query: 248 SERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           S  I   A + D  +A  LF  +  +  + +E+T + ++++         GKQ+  +  K
Sbjct: 279 SAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK 338

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +GF   + +  AL+ MY KC  + DAR  FDYL   D V W SMI GY +NG    AL +
Sbjct: 339 LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSL 398

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           +  M    ++PN  TMAS+L+A S+  +L+Q  Q+H+  +K GF L+  + S L T Y K
Sbjct: 399 YGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAK 458

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C  L +   V   +  ++ +  NA+ S L    C  EALEL+  +     + +  TF  +
Sbjct: 459 CGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNI 518

Query: 485 LKACAAMTDLEQGKA---------------------IHCLALKARYDQDI-FVESAVIDM 522
           L AC+ M  +E+G                       +  L+   +  + I F ESA ID 
Sbjct: 519 LSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDH 578

Query: 523 -YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
             C    I  A R +R     + AG   M +G  +   Y  +S++++ + ++
Sbjct: 579 GMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRW 630



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 209/398 (52%), Gaps = 15/398 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQ 61
           +++ IK     D  + ++L++ + K A      R +FDT   R+ +++  +ISG A    
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCK-AGLTPEARKVFDTMPERNSVSWATMISGYASQKL 189

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE----NEIVHGVCLKLGFSSRVYLVS 117
           +  AL LF  +R +    + F F+S++ A  +L E     + +H + +K G  S V + +
Sbjct: 190 AAEALGLFRLMRREEEGENEFVFTSVLSAL-TLPELVNNGKQIHCIAVKNGLLSIVSVGN 248

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G +  A   F    D +++ ++AM+ GY  +G+ DK+ ++F  M   G+  
Sbjct: 249 ALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRP 308

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+   V+ A  D+    EG+Q+H + +K+GF S +  ++  A++++Y +C   +DA K
Sbjct: 309 SEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQI--YVMTALVDMYAKCSSIVDARK 366

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            FD + EPD+V W+  I       E   A  L+  +       NE TM ++L +      
Sbjct: 367 GFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAA 426

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQI A   K GF   V IG+AL +MY KCG + D   +F  +  +D +SWN+MI+G
Sbjct: 427 LEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISG 486

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
            S+NG   +AL++F  M      P+  T  +IL A S+
Sbjct: 487 LSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSH 524



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 158/294 (53%), Gaps = 11/294 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ + +KNG      +   L++ + K      A +    + +++ IT++A+I+G A+  
Sbjct: 230 QIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSG 289

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  ALKLF  +   G+RP  FTF  ++ AC   G+  E + VH   LKLGF S++Y+++
Sbjct: 290 DSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMT 349

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   IV A   F    + D V +T+M+ GYV NGE + +  ++  M   G+  
Sbjct: 350 ALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE ++ +VL A      +++G+QIH   VK GF  G+   + +A+  +Y +CG   D   
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYGF--GLEVPIGSALSTMYAKCGCLKDGTL 467

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           +F  +   DV+SW+  I+       G EA  LF++++    + +  T +N+LS+
Sbjct: 468 VFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSA 521


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 391/725 (53%), Gaps = 22/725 (3%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G+    ++ ++LI  F+K   F  A++   DT + ++  +N +I+G  R    G    LF
Sbjct: 2   GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
             +     +PD++T+SS++ AC SL+E    ++V    +K G +  V++ +  ++ YAK 
Sbjct: 62  HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKC 120

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G +  A   F    +   V++T M+ GY  + +   + E+F EMR  G+E+N  ++T+V+
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180

Query: 187 ---GASFDVKEGEQIHGFGVKVGF-----LSGVCNHLNN--AIMNLYVRCGQKLDAVKMF 236
              G    V E  Q+H +  K GF     ++     +N+    +NL  R  + LD ++  
Sbjct: 181 SACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRR- 239

Query: 237 DEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
             I    V S+S+         +A  LF  +       +E+++ +LLS +     L  GK
Sbjct: 240 QNIVNVMVTSFSQNKKPG----KAIRLFTRMLQEGLNPDEFSVCSLLSVLD---CLNLGK 292

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           Q+ ++  K G +  +++G++L +MY KCG + ++ S+F  + FKD+  W SMI+G++E G
Sbjct: 293 QVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYG 352

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
           +  +A+ +F  ML+    P+  T+A++L   S+  SL ++ ++H + +++G      + S
Sbjct: 353 YLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGS 412

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+ TY KC +L  +++V   + + + V  ++L S         +   L+R +  S   +
Sbjct: 413 ALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSM 472

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +    S +LKA     + E G  +H    K     +  V S+++ MY K G+IED  +AF
Sbjct: 473 DSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAF 532

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
            +I    L  W A++  YAQHG  +E   ++  M + G KPD++T++ VL++C H GLV 
Sbjct: 533 SQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVE 592

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E   +L+ M   +G+ P+  HY C+VD LGR G L  A+  I+  PI PDA +W +LL+A
Sbjct: 593 EGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAA 652

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C IYG+++LG LA  K +EL+P +   YV LSN+ A  G W++V + RK MK   + KEP
Sbjct: 653 CKIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEP 712

Query: 717 GYSWI 721
           G+S +
Sbjct: 713 GWSSV 717



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 234/468 (50%), Gaps = 18/468 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++ + K+G +LD  ++  LIS  +K  D     R F  L D + ++I+  N +++  +
Sbjct: 194 QVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--NVMVTSFS 251

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +  + G A++LF R+  +GL PD F+  SL+     L   + VH   LK G    + + S
Sbjct: 252 QNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSYTLKSGLILDLTVGS 311

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                Y+K G +  +   F++    DN  + +M+ G+   G   ++  +F EM   G   
Sbjct: 312 SLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSP 371

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E +L AVL    +   +   ++IHG+ ++ G   G+   L +A++N Y +CG    A K
Sbjct: 372 DESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGM--PLGSALVNTYSKCGSLKLARK 429

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           ++D + E D VS S  I+  +  G+  + F LF+D+  + F ++ Y + ++L +      
Sbjct: 430 VYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEE 489

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G Q+ A+  K+G     S+G++L++MY K G + D    F  +   D ++W ++IA 
Sbjct: 490 SELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIAS 549

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-MQVHSHIIKSGFLL 410
           Y+++G  N+AL ++C M E    P+  T   +L A S+   +++    ++S +   G   
Sbjct: 550 YAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEP 609

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           ++    C++   G+   L E++  ++       +  +AL    + A+C
Sbjct: 610 ENRHYVCMVDALGRSGRLREAENFIN----TRPIKPDALVWGTLLAAC 653


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/620 (33%), Positives = 356/620 (57%), Gaps = 14/620 (2%)

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
           D V+++A++  Y  N +  ++   F +M   G   NE+  T V  A     ++  G+ I 
Sbjct: 6   DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65

Query: 200 GFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWS---ERIAAA 254
           GF +K G F S VC  +  A+++++V+    L+ A K+FD + + +VV+W+    R    
Sbjct: 66  GFLLKTGYFESDVC--VGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               +A  LF D+  + +  + +T+  ++S+     +L  G+Q      K G    V +G
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 315 NALISMYGKC---GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN-QALDMFCHMLE 370
            +L+ MY KC   G V+DAR +FD +   + +SW ++I GY ++G  + +A+++F  M++
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PN +T +S+L+A +N   +    QV++ ++K      + + + LI+ Y +C  +  
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +++    + +KN V  N + +    +    EA EL+  I G+   VN  TF+ +L   ++
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           +  + +G+ IH   LK+ +  ++ + +A+I MY +CG IE A + F ++   ++  W +M
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + G+A+HG        F+KM + GV P+E+TY+AVL++C H GL+ E   +   M   HG
Sbjct: 424 ITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHG 483

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           ++P++EHYAC+VDLLGR G LE A   ++ MP   DA + ++ L AC ++GN+DLG  A 
Sbjct: 484 IVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAA 543

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
             +LE  P + + Y+LLSNL+ASAG W +V ++RK+MKE+ L KE G SWI V    H F
Sbjct: 544 EMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKF 603

Query: 731 YAGDSSHSQSKEIYKELIKL 750
           Y GD+SH Q++EIY EL +L
Sbjct: 604 YVGDTSHPQAQEIYDELDQL 623



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 245/490 (50%), Gaps = 39/490 (7%)

Query: 2   IYSLLIKNGH-HLDPILSTTLISHFTK-FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           I+  L+K G+   D  +   LI  F K   D   A++      +R+++T+  +I+   + 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             S  A+ LF  +   G  PD FT S +V AC   G L      H + +K G    V + 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 117 SGFIENYAK---SGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSK-EVFVEMR 171
              ++ YAK    G +  A   F D + + NV ++TA++ GYV +G  D+   E+F+EM 
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVF-DRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242

Query: 172 SLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
              ++ N F+ ++VL A  ++ +   GEQ++   VK+   S  C  + N+++++Y RCG 
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINC--VGNSLISMYSRCGN 300

Query: 229 KLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             +A K FD + E ++VS++  +   A + +  EAF LF ++      +N +T  +LLS 
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 +  G+QI +   K GF   + I NALISMY +CG +  A  +F+ +   + +SW
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHII 404
            SMI G++++GF  +AL+ F  MLE  + PN  T  ++L A S+   + + ++   S  +
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G +      +C++   G+   L E+  +++ +  K                  A+AL 
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFK------------------ADALV 522

Query: 465 LYRTIWGSCR 474
           L RT  G+CR
Sbjct: 523 L-RTFLGACR 531



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 256/508 (50%), Gaps = 24/508 (4%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EI 99
           RD+++++ALIS  A   ++  A+  F  +   G  P+ + F+ + +AC S +EN    +I
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRAC-SNKENISLGKI 63

Query: 100 VHGVCLKLG-FSSRVYLVSGFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           + G  LK G F S V +    I+ + K +G++ SA   F    D + V +T M+  +   
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNH 214
           G    + ++F++M   G   + F+L+ V+ A  +   +  G Q H   +K G    VC  
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC-- 181

Query: 215 LNNAIMNLYVRC---GQKLDAVKMFDEITEPDVVSWSERI-----AAACDGVEAFGLFKD 266
           +  +++++Y +C   G   DA K+FD +   +V+SW+  I     +  CD  EA  LF +
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDR-EAIELFLE 240

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +     + N +T  ++L +      +  G+Q+ A   K+    +  +GN+LISMY +CG 
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + +AR  FD L  K+ VS+N+++  Y+++    +A ++F  +       N +T AS+L  
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            S+  ++ +  Q+HS I+KSGF  +  + + LI+ Y +C  +  + +V +E+   N +  
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
            ++ +          ALE +  +  +    N  T+  VL AC+ +  + +G   H  ++K
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSMK 479

Query: 507 ARYDQDIFVE--SAVIDMYCKCGTIEDA 532
             +     +E  + V+D+  + G +E+A
Sbjct: 480 VEHGIVPRMEHYACVVDLLGRSGHLEEA 507



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 6/256 (2%)

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +D VSW+++I+ Y+ N    +A+  F  MLE    PN Y    +  A SN +++     +
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 400 HSHIIKSGFLLDDSMISC-LITTYGKCNA-LNESKRVLSEIDKKNAVHINALASVLVYAS 457
              ++K+G+   D  + C LI  + K N  L  + +V   +  +N V    + +      
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              +A++L+  +  S    +  T S V+ ACA M  L  G+  HCL +K+  D D+ V  
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184

Query: 518 AVIDMYCKC---GTIEDAKRAFRKICRDSLAGWNAMMMGYAQH-GCYHEVSNLFNKMSKF 573
           +++DMY KC   G+++DA++ F ++   ++  W A++ GY Q  GC  E   LF +M + 
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244

Query: 574 GVKPDEITYLAVLTSC 589
            VKP+  T+ +VL +C
Sbjct: 245 QVKPNHFTFSSVLKAC 260



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 107/194 (55%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
           Q+Y+L++K        +  +LIS +++  +    R+AF  LF+   +++++YN +++  A
Sbjct: 271 QVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFE---KNLVSYNTIVNAYA 327

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           +   S  A +LF+ +   G   +AFTF+SL+      G++ + E +H   LK GF S ++
Sbjct: 328 KSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLH 387

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y++ G I +A   F +  D + +++T+M+ G+  +G   ++ E F +M   G
Sbjct: 388 ICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG 447

Query: 175 LELNEFSLTAVLGA 188
           +  NE +  AVL A
Sbjct: 448 VSPNEVTYIAVLSA 461



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 53/91 (58%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++K+G   +  +   LIS +++  +   AF+   +  + ++I++ ++I+G A+  
Sbjct: 372 QIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHG 431

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL+ F ++   G+ P+  T+ +++ AC
Sbjct: 432 FATRALETFHKMLEAGVSPNEVTYIAVLSAC 462


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/772 (30%), Positives = 398/772 (51%), Gaps = 35/772 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +    +I+ ++K  D  +A  F      RD++++N+++SG  +  +S  ++++F  + 
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+  D  TF+ ++K C  L++  +   +HG+ +++G  + V   S  ++ YAK    V
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---G 187
            +   F+   + ++V+++A++ G V N     + + F EM+ +   +++    +VL    
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292

Query: 188 ASFDVKEGEQIHGFGVKVGFLS-GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           A  +++ G Q+H   +K  F + G+   +  A +++Y +C    DA  +FD     +  S
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGI---VRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           ++  I        G +A  LF  L  +    +E ++  +  +    + L  G QI     
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K      V + NA I MYGKC  + +A  +FD +  +D+VSWN++IA + +NG   + L 
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  ML   + P+ +T  SIL+A +   SL   M++HS I+KSG   + S+   LI  Y 
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528

Query: 424 KCNALNESKRV-------------LSEIDKKN-------AVHINALASVLVYASCHAEAL 463
           KC  + E++++             + E++K +        V  N++ S  V      +A 
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +       +  T++ VL  CA +     GK IH   +K     D+++ S ++DMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG + D++  F K  R     WNAM+ GYA HG   E   LF +M    +KP+ +T++
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L +C H GL+ +   Y   M   +GL PQL HY+ +VD+LG+ G ++ A   I +MP 
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768

Query: 644 PPDAHIWQSLLSACTIY-GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             D  IW++LL  CTI+  N+++   A + LL L P + S Y LLSN+YA AGMW  V  
Sbjct: 769 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 828

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           LR+ M+   L KEPG SW+ +    H F  GD +H + +EIY+EL  +Y  M
Sbjct: 829 LRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 189/726 (26%), Positives = 331/726 (45%), Gaps = 89/726 (12%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
            R ++++N  ++    + +  P+   F     Q        FS + K C   G+L+  + 
Sbjct: 11  TRSVVSFNRCLTEKISY-RRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQ 69

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-----RDCLDL------------ 142
            H   +  GF    ++++  ++ Y  S + VSA M F     RD +              
Sbjct: 70  AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129

Query: 143 --------------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
                         D V++ +M+ GY+ NGE  KS EVFV+M   G+E +  +   +L  
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189

Query: 189 -SF--DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
            SF  D   G QIHG  V+VG  + V     +A++++Y +  + ++++++F  I E + V
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVV--AASALLDMYAKGKRFVESLRVFQGIPEKNSV 247

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SWS  IA          A   FK+++  +  +++    ++L S      LR G Q+ A  
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS--ENGFFNQ 360
            K  F     +  A + MY KC  + DA+ +FD     +  S+N+MI GYS  E+GF  +
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF--K 365

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           AL +F  ++   L  +  +++ +  A +  K L + +Q++   IKS   LD  + +  I 
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            YGKC AL E+ RV  E+ +++AV  NA+ +         E L L+ ++  S  E +  T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF-RKI 539
           F  +LKAC   + L  G  IH   +K+    +  V  ++IDMY KCG IE+A++   R  
Sbjct: 486 FGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544

Query: 540 CRDSLAG-------------------WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            R +++G                   WN+++ GY       +   LF +M + G+ PD+ 
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604

Query: 581 TYLAVLTSCCH---AGLVREARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLL 631
           TY  VL +C +   AGL ++          +H  +     Q + Y C  +VD+  + G L
Sbjct: 605 TYATVLDTCANLASAGLGKQ----------IHAQVIKKELQSDVYICSTLVDMYSKCGDL 654

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVLLSNL 690
             +++  ++  +  D   W +++     +G  +  + L    +LE    N  T++ +   
Sbjct: 655 HDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713

Query: 691 YASAGM 696
            A  G+
Sbjct: 714 CAHMGL 719



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 270/569 (47%), Gaps = 33/569 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ ++++ G   D + ++ L+  + K   F  + R       ++ ++++A+I+G  +  
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ALK F  ++          ++S++++C +L E  +   +H   LK  F++   + +
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +  A++ F +  +L+  +Y AM+ GY       K+  +F  + S GL  
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+ V  A   VK   EG QI+G  +K      VC  + NA +++Y +C    +A +
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC--VANAAIDMYGKCQALAEAFR 438

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE+   D VSW+  IAA      G E   LF  +  +  + +E+T  ++L +  G   
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS- 497

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--------- 342
           L  G +I +   K G     S+G +LI MY KCG + +A  I      + +         
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557

Query: 343 -----------VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
                      VSWNS+I+GY        A  +F  M+E  + P+ +T A++L+  +N  
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           S     Q+H+ +IK     D  + S L+  Y KC  L++S+ +  +  +++ V  NA+  
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYD 510
              +     EA++L+  +     + N  TF  +L+ACA M  +++G +  + +      D
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             +   S ++D+  K G ++ A    R++
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREM 766



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 171/380 (45%), Gaps = 32/380 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QIY L IK+   LD  ++   I  + K      AFR   + + RD +++NA+I+   +  
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           +    L LF  +    + PD FTF S++KAC  GSL     +H   +K G +S   +   
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 522

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN--------------------VAYTAMVCGYVWNG 158
            I+ Y+K G I  AE          N                    V++ +++ GYV   
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
           + + ++ +F  M  +G+  ++F+   VL    ++     G+QIH   +K    S V  ++
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV--YI 640

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDF 272
            + ++++Y +CG   D+  MF++    D V+W+  I   A    G EA  LF+ +   + 
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDAR 331
           + N  T I++L +     ++  G +      +  G    +   + ++ + GK G+V  A 
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760

Query: 332 SIFDYLIFK-DSVSWNSMIA 350
            +   + F+ D V W +++ 
Sbjct: 761 ELIREMPFEADDVIWRTLLG 780


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/748 (31%), Positives = 385/748 (51%), Gaps = 16/748 (2%)

Query: 17  LSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL- 72
           L T L+  +    +F D    F  L        + +N LI G         A+  + ++ 
Sbjct: 78  LQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMW 137

Query: 73  -RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
                 RPD  T   +VK+C   G+L    +VH     LG    +Y+ S  I+ YA +G 
Sbjct: 138 AHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGL 197

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT---AV 185
           +  A   F    + D V +  M+ GYV  G+   +  +F  MR+ G + N  +L    +V
Sbjct: 198 LDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSV 257

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
             A  D+  G Q+H   VK G    V   + N ++++Y +C    +A ++F  +   D+V
Sbjct: 258 CAAEADLLSGVQLHTLAVKYGLEPEVA--VANTLVSMYAKCQCLEEAWRLFGLMPRDDLV 315

Query: 246 SWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +W+  I+    +G+  +A  LF D++ +  Q +  T+ +LL ++      + GK+I  + 
Sbjct: 316 TWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYI 375

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            +      V + +AL+ +Y KC  V  A+++FD     D V  ++MI+GY  N     A+
Sbjct: 376 VRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAV 435

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            MF ++L   + PN   +AS L A ++  +++   ++H +++K+ +     + S L+  Y
Sbjct: 436 KMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMY 495

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  L+ S  + S++  K+ V  N++ S         EAL+L+R +     + N  T S
Sbjct: 496 SKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTIS 555

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            +L ACA +  +  GK IH + +K     D+F ESA+IDMY KCG +E A R F  +   
Sbjct: 556 SILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEK 615

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           +   WN+++  Y  HG   E  +L   M + G K D +T+LA++++C HAG V+E     
Sbjct: 616 NEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLF 675

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
            CM++ + + PQ+EH +C+VDL  R G L+ A   I  MP  PDA IW +LL AC ++ N
Sbjct: 676 RCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRN 735

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           ++L  +A  +L +L P N   YVL+SN+ A AG W+ V K+R+ MK+K + K PGYSW+ 
Sbjct: 736 VELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVD 795

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           V   +H F A D +H  S+EIY  L  L
Sbjct: 796 VNNTSHLFVAADKNHPDSEEIYMSLKSL 823



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 236/451 (52%), Gaps = 12/451 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G   +  ++ TL+S + K      A+R        D++T+N +ISG  +  
Sbjct: 269 QLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNG 328

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               AL+LF  ++  GL+PD+ T +SL+ A   L   ++ + +HG  ++      V+LVS
Sbjct: 329 LVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVS 388

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K  ++  A+  F     +D V  + M+ GYV N   + + ++F  + +LG++ 
Sbjct: 389 ALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKP 448

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N   + + L A      ++ G+++HG+ +K  +  G C ++ +A+M++Y +CG+   +  
Sbjct: 449 NAVMVASTLPACASMAAMRIGQELHGYVLKNAY-EGRC-YVESALMDMYSKCGRLDLSHY 506

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           MF +++  D V+W+  I   A   +  EA  LF+ +     + N  T+ ++LS+  G   
Sbjct: 507 MFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPA 566

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GK+I     K      +   +ALI MYGKCG +  A  +F+++  K+ VSWNS+I+ 
Sbjct: 567 IYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISA 626

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G   +++D+ C M E     +  T  +++ A +++  +++ +++   + +   +  
Sbjct: 627 YGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEP 686

Query: 412 D-SMISCLITTYGKCNALNESKRVLSEIDKK 441
               +SC++  Y +   L+++ + ++++  K
Sbjct: 687 QVEHLSCMVDLYSRAGKLDKAMQFIADMPFK 717


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/757 (29%), Positives = 405/757 (53%), Gaps = 12/757 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + K+G   D  +ST ++  +  +     + +   +  +R+++++ +L+ G +   
Sbjct: 63  QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    + ++  +R +G+  +  + S ++ +CG L++  +   + G  +K G  S++ + +
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I      G +  A   F    + D +++ ++   Y  NG  ++S  +F  MR    E+
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242

Query: 178 NEFS---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   L +VLG     K G  IHG  VK+GF S VC  + N ++ +Y   G+ ++A  
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC--VCNTLLRMYAGAGRSVEANL 300

Query: 235 MFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   D++SW+  +A+   DG  ++A GL   +  +   +N  T  + L++      
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G+ +       G      IGNAL+SMYGK G+++++R +   +  +D V+WN++I G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFLL 410
           Y+E+   ++AL  F  M    +  N  T+ S+L A +     L++   +H++I+ +GF  
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D+ + + LIT Y KC  L+ S+ + + +D +N +  NA+ +   +     E L+L   + 
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                ++  +FS  L A A +  LE+G+ +H LA+K  ++ D F+ +A  DMY KCG I 
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +  +        SL  WN ++    +HG + EV   F++M + G+KP  +T++++LT+C 
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV +   Y   ++   GL P +EH  C++DLLGR G L  A+  I +MP+ P+  +W
Sbjct: 661 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 720

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLL++C I+GN+D G  A   L +L+P+++S YVL SN++A+ G W DV  +RK+M  K
Sbjct: 721 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 780

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            + K+   SW+ +      F  GD +H Q+ EIY +L
Sbjct: 781 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 186/668 (27%), Positives = 322/668 (48%), Gaps = 46/668 (6%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEI 99
           R+ +++N ++SG+ R       ++ F ++   G++P +F  +SLV ACG      +E   
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VHG   K G  S VY+ +  +  Y   G +  +   F +  D + V++T+++ GY   GE
Sbjct: 64  VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
            ++  +++  MR  G+  NE S++ V+ +   +K+   G QI G  VK G  S +   + 
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA--VE 181

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQ 273
           N+++++    G    A  +FD+++E D +SW+   AA A +G   E+F +F  +R    +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +N  T+  LLS +G     + G+ I     K+GF  VV + N L+ MY   G+  +A  +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  KD +SWNS++A +  +G    AL + C M+      N  T  S L A       
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           ++   +H  ++ SG   +  + + L++ YGK   ++ES+RVL ++ +++ V  NAL    
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQD 512
                  +AL  ++T+       N  T   VL AC    D LE+GK +H   + A ++ D
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
             V++++I MY KCG +  ++  F  +   ++  WNAM+   A HG   EV  L +KM  
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541

Query: 573 FGVKPDEITYLAVLTSCCHAGLVRE-----------------------ARTYLSC--MSD 607
           FGV  D+ ++   L++     ++ E                       A  Y  C  + +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601

Query: 608 LHGLIP-----QLEHYACIVDLLGRVGLLEGAKMTID---QMPIPPDAHIWQSLLSACTI 659
           +  ++P      L  +  ++  LGR G  E    T     +M I P    + SLL+AC+ 
Sbjct: 602 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 661

Query: 660 YGNIDLGL 667
            G +D GL
Sbjct: 662 GGLVDKGL 669


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/724 (32%), Positives = 384/724 (53%), Gaps = 21/724 (2%)

Query: 47  ITYNALISGLARFCQSGPALKLFD-RLRYQGLRPDAFTFSSLVKACG---SLQENEIVHG 102
           ++ N+ I+ + +      AL  F+  L+   ++ +  T+ +L+ AC    SL+  + +H 
Sbjct: 45  LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFD 161
             LK      + L +  +  Y K G +  A   F D + L +V ++T M+ GY  NG+ +
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAF-DTMQLRSVVSWTIMISGYSQNGQEN 163

Query: 162 KSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHL--N 216
            +  ++++M   G   ++ +  +++ A   + D+  G Q+HG  +K    SG  +HL   
Sbjct: 164 DAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIK----SGYDHHLIAQ 219

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDL-RFNDF 272
           NA++++Y + GQ   A  +F  I+  D++SW+  I         +EA  LF+D+ R   +
Sbjct: 220 NALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVY 279

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           Q NE+   ++ S+         G+QIQ  C K G    V  G +L  MY K G +  A+ 
Sbjct: 280 QPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKR 339

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
            F  +   D VSWN++IA  + N   N+A+  FC M+   L+P+  T  ++L A  +  +
Sbjct: 340 AFYQIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMT 398

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK-NAVHINALAS 451
           L Q MQ+HS+IIK G     ++ + L+T Y KC+ L+++  V  +I +  N V  NA+ S
Sbjct: 399 LNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILS 458

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    EA  L++ +  S  + +  T + +L  CA +  LE G  +HC ++K+    
Sbjct: 459 ACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVV 518

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+ V + +IDMY KCG ++ A+  F       +  W+++++GYAQ G   E  NLF  M 
Sbjct: 519 DVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMR 578

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             GV+P+E+TYL VL++C H GLV E     + M    G+ P  EH +C+VDLL R G L
Sbjct: 579 NLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCL 638

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
             A+  I +    PD  +W++LL++C  +GN+D+   A   +L+L P N +  VLLSN++
Sbjct: 639 YEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIH 698

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           ASAG W +V +LR  MK+  + K PG SWI V    H F++ DSSH Q   IY  L  L+
Sbjct: 699 ASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLW 758

Query: 752 EHMV 755
             M+
Sbjct: 759 LQML 762



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 272/571 (47%), Gaps = 16/571 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I+  ++K+    D +L   +++ + K    + A R  FDT Q R ++++  +ISG ++ 
Sbjct: 101 RIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDA-RKAFDTMQLRSVVSWTIMISGYSQN 159

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            Q   A+ ++ ++   G  PD  TF S++KAC   G +     +HG  +K G+   +   
Sbjct: 160 GQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQ 219

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
           +  I  Y K G+I  A   F      D +++ +M+ G+   G   ++  +F +M   G+ 
Sbjct: 220 NALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVY 279

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NEF   +V  A   + +   G QI G   K G    V      ++ ++Y + G    A
Sbjct: 280 QPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNV--FAGCSLCDMYAKFGFLPSA 337

Query: 233 VKMFDEITEPDVVSWSERIAAAC--DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            + F +I  PD+VSW+  IAA    D  EA   F  +       ++ T +NLL + G   
Sbjct: 338 KRAFYQIESPDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPM 397

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWNSMI 349
            L  G QI ++  K+G  +V ++ N+L++MY KC  ++DA ++F D     + VSWN+++
Sbjct: 398 TLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAIL 457

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +  S++    +A  +F  ML     P+  T+ +IL   +   SL+   QVH   +KSG +
Sbjct: 458 SACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLV 517

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           +D S+ + LI  Y KC  L  ++ V       + V  ++L           EAL L+R +
Sbjct: 518 VDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMM 577

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGT 528
                + N  T+  VL AC+ +  +E+G  ++  + ++          S ++D+  + G 
Sbjct: 578 RNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGC 637

Query: 529 IEDAKRAFRKICRDS-LAGWNAMMMGYAQHG 558
           + +A+   +K   D  +  W  ++     HG
Sbjct: 638 LYEAENFIKKTGFDPDITMWKTLLASCKTHG 668


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/704 (33%), Positives = 382/704 (54%), Gaps = 26/704 (3%)

Query: 65  ALKLFDRLRYQGLRP-DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           A+   D +   G+RP D+ TFSSL+K+C      +  ++VH   ++        L +  I
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104

Query: 121 ENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNG-EFDKSKEVFVEMRSLGLE 176
             Y+KSG++  A+  F         D V+++AM+  +  NG EFD  K +FVE   +GL 
Sbjct: 105 SLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIK-LFVEFLEMGLV 163

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD- 231
            N++  TAV+ A  +   V  G  I GF +K G F S VC  +  ++++++V+     + 
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVC--VGCSLIDMFVKGENSFEN 221

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FD+++E +VV+W+  I          EA   F D+  + F+ +++T+ ++ S+   
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSW 345
              L  G+Q+ ++  + G  + V    +L+ MY KC   G V+D R +FD +     +SW
Sbjct: 282 LENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSW 339

Query: 346 NSMIAGYSEN-GFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHI 403
            ++I GY +N     +A+++F  M+    + PN +T +S  +A  N    +   QV  H 
Sbjct: 340 TALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHA 399

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
            K G   + S+ + +I+ + KC+ + +++     + +KN V  N              A 
Sbjct: 400 FKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAF 459

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           EL   I      V+  TF+ +L   A +  L +G+ IH   LK     +  V +A+I MY
Sbjct: 460 ELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMY 519

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG+I+ A R F  +   ++  W +M+ G+A+HG    V   FN+M+K GVKP+E+TY+
Sbjct: 520 SKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYV 579

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           A+L++C H GLV E   + + M + H + P++EHYAC+VDLL R GLL  A   I+ MP 
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
             D  +W++ L AC ++ N +LG LA  K+LE  P+  + Y+ LSN+YASAG W +  ++
Sbjct: 640 QADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEM 699

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           R++MKE+ L KE G SWI VG   H FY GD+SH  + +IY EL
Sbjct: 700 RRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDEL 743



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 276/552 (50%), Gaps = 26/552 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ----NRDIITYNALISGLA 57
           +++ LI+     D +L  +LIS ++K  D  +A + +F+T      RD+++++A+++   
Sbjct: 84  VHARLIEFEIEPDSVLYNSLISLYSKSGDLTKA-KDVFETMGRFGKRDVVSWSAMMACFG 142

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLG-FSSRV 113
              +   A+KLF      GL P+ + ++++++AC +   +    ++ G  +K G F S V
Sbjct: 143 NNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDV 202

Query: 114 YLVSGFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            +    I+ + K      +A   F    +L+ V +T M+   +  G   ++   F++M  
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL 262

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC--- 226
            G E ++F+L++V  A  +++    G Q+H + ++    SG+ + +  +++++Y +C   
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGRQLHSWAIR----SGLADDVECSLVDMYAKCSAD 318

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA---ACD-GVEAFGLFKDL-RFNDFQINEYTMIN 281
           G   D  K+FD + +  V+SW+  I      C+   EA  LF ++      + N +T  +
Sbjct: 319 GSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSS 378

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
              + G     R GKQ+    +K G     S+ N++ISM+ KC ++ DAR+ F+ L  K+
Sbjct: 379 AFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKN 438

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VS+N+ + G   N  F  A ++   + E  L  + +T AS+L  V+N  SL++  Q+HS
Sbjct: 439 LVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHS 498

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            ++K G   +  + + LI+ Y KC +++ + RV S +D +N +   ++ +          
Sbjct: 499 QVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAER 558

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVI 520
            LE +  +     + N  T+  +L AC+ +  + +G +  + +    +    +   + ++
Sbjct: 559 VLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMV 618

Query: 521 DMYCKCGTIEDA 532
           D+ C+ G + DA
Sbjct: 619 DLLCRAGLLTDA 630



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 52/91 (57%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++K G   +  +   LIS ++K      A R      NR++I++ ++I+G A+  
Sbjct: 495 QIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHG 554

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +   L+ F+++  +G++P+  T+ +++ AC
Sbjct: 555 FAERVLETFNQMTKEGVKPNEVTYVAILSAC 585


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 245/778 (31%), Positives = 411/778 (52%), Gaps = 23/778 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD------TQNRDIITYNALISG 55
            I+  +I  G   DP ++T+L++ + K      A + +FD         RD+   N++I G
Sbjct: 583  IHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQ-VFDGWSQSGVSARDVTVCNSMIDG 641

Query: 56   LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSL--QENEIVHGVCLKLGFS 110
              +F +    +  F R+   G+RPDAF+ S +V      G+   ++ + +HG  L+    
Sbjct: 642  YFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLD 701

Query: 111  SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVE 169
               +L +  I+ Y K G    A   F +  D  NV  +  M+ G+  +   + S E+++ 
Sbjct: 702  GDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYML 761

Query: 170  MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
             +S  ++L   S T  LGA   S +   G QIH   VK+G  +    +++ +++++Y +C
Sbjct: 762  AKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDND--PYVSTSLLSMYSKC 819

Query: 227  GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
            G   +A  +F  + +  +  W+  +AA  +   G  A  LF  +R      + +T+ N++
Sbjct: 820  GMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVI 879

Query: 284  SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            S      +   GK + A  +K       +I +AL+++Y KCG   DA  +F  +  KD V
Sbjct: 880  SCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMV 939

Query: 344  SWNSMIAGYSENGFFNQALDMFCHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            +W S+I+G  +NG F +AL +F  M +   SL P+   M S++ A +  ++L   +QVH 
Sbjct: 940  AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHG 999

Query: 402  HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
             +IK+G +L+  + S LI  Y KC     + +V + +  +N V  N++ S     +    
Sbjct: 1000 SMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPEL 1059

Query: 462  ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
            ++EL+  +       +  + + VL A ++   L +GK++H   L+     D  +++A+ID
Sbjct: 1060 SIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALID 1119

Query: 522  MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
            MY KCG  + A+  F+K+   SL  WN M+ GY  HG      +LF+++ K G  PD++T
Sbjct: 1120 MYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVT 1179

Query: 582  YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
            +L+++++C H+G V E + +   M   +G+ P++EHYA +VDLLGR G LE A   I  M
Sbjct: 1180 FLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAM 1239

Query: 642  PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
            P   D+ IW  LLSA   + N++LG+L+  KLL ++P+  STYV L NLY  AG+ N+  
Sbjct: 1240 PTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAA 1299

Query: 702  KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
            KL  EMKE+ L K+PG SWI V   ++ F++G SS     EI+K L +L  +MV   K
Sbjct: 1300 KLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSNMVTEDK 1357



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 166/645 (25%), Positives = 297/645 (46%), Gaps = 54/645 (8%)

Query: 32   RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK-LFDRLRYQGLRP---DAFTFSSL 87
            RR    L D+     I+  ++ SG+    Q G  L+ L    ++ G  P     FTF SL
Sbjct: 512  RRRLSRLADSY----ISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSL 567

Query: 88   VKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
            +KAC S   L   + +HG  + LG+    ++ +  +  Y K G +  A   F        
Sbjct: 568  LKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGV 627

Query: 145  VAYTAMVCGYVWNG--EFDKSKE---VFVEMRSLGLELNEFSLTAVLG-----ASFDVKE 194
             A    VC  + +G  +F + KE    F  M  LG+  + FSL+ V+       +F  ++
Sbjct: 628  SARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRRED 687

Query: 195  GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERI-- 251
            G+QIHG+ ++   L G  + L  A++++Y + G   DA ++F EI +  +VV W+  I  
Sbjct: 688  GKQIHGYMLR-NSLDGD-SFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVG 745

Query: 252  ---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
               +  C+   +  L+   + N  ++   +    L +         G+QI     K+G  
Sbjct: 746  FGGSEICES--SLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLD 803

Query: 309  EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
                +  +L+SMY KCG V +A ++F  ++ K    WN+M+A Y EN     AL++F  M
Sbjct: 804  NDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFM 863

Query: 369  LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
             + S++P+ +T+++++   S          VH+ + K       ++ S L+T Y KC   
Sbjct: 864  RQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCD 923

Query: 429  NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS------TFS 482
             ++  V   +++K+ V   +L S L       EAL+++    G  ++ + S        +
Sbjct: 924  TDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF----GDMKDDDDSLKPDSDIMT 979

Query: 483  IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
             V+ ACA +  L  G  +H   +K     ++FV S++ID+Y KCG  E A + F  +  +
Sbjct: 980  SVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPE 1039

Query: 543  SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            ++  WN+M+  Y+++        LFN M   G+ PD ++  +VL +      + + ++  
Sbjct: 1040 NIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-- 1097

Query: 603  SCMSDLHGL-----IPQLEHYA-CIVDLLGRVGLLEGAKMTIDQM 641
                 LHG      IP   H    ++D+  + G  + A+    +M
Sbjct: 1098 -----LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 1137



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 303/637 (47%), Gaps = 36/637 (5%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGL--A 57
            QI+  +++N    D  L T LI  + KF     A+R   + +++ +++ +N +I G   +
Sbjct: 690  QIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGS 749

Query: 58   RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRV 113
              C+S  +L+L+   +   ++  + +F+  + AC S  EN      +H   +K+G  +  
Sbjct: 750  EICES--SLELYMLAKSNSVKLVSTSFTGALGAC-SQSENSAFGRQIHCDVVKMGLDNDP 806

Query: 114  YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            Y+ +  +  Y+K G +  AE  F   +D     + AMV  YV N     + E+F  MR  
Sbjct: 807  YVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQK 866

Query: 174  GLELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
             +  + F+L+ V+   + F + + G+ +H    K    S     + +A++ LY +CG   
Sbjct: 867  SVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPA--IESALLTLYSKCGCDT 924

Query: 231  DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFND--FQINEYTMINLLSS 285
            DA  +F  + E D+V+W   I+  C      EA  +F D++ +D   + +   M +++++
Sbjct: 925  DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINA 984

Query: 286  VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
              G   L  G Q+     K G +  V +G++LI +Y KCG    A  +F  +  ++ V+W
Sbjct: 985  CAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAW 1044

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            NSMI+ YS N     ++++F  ML   + P+  ++ S+L A+S++ SL +   +H + ++
Sbjct: 1045 NSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 1104

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---A 462
             G   D  + + LI  Y KC     ++ +  ++  K+ +  N +  +  Y S H +   A
Sbjct: 1105 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM--IYGYGS-HGDCRTA 1161

Query: 463  LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
            L L+  +  +    +  TF  ++ AC     +E+GK    + +K  Y  +  +E  + ++
Sbjct: 1162 LSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEI-MKQDYGIEPKMEHYANMV 1220

Query: 521  DMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVS-NLFNKMSKFGVKPD 578
            D+  + G +E+A    + +  ++ +  W  ++     H   H V   + +      ++P+
Sbjct: 1221 DLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTH---HNVELGILSAEKLLRMEPE 1277

Query: 579  E-ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
               TY+ ++     AGL  EA   L  M +  GL  Q
Sbjct: 1278 RGSTYVQLINLYMEAGLKNEAAKLLGEMKE-RGLQKQ 1313



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 169/415 (40%), Gaps = 53/415 (12%)

Query: 344 SWNSMIAGYSENGFFNQALDMFC-HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           S NS I    + G + QAL ++  H     L  + +T  S+L+A S+  +L     +H  
Sbjct: 527 SVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGS 586

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVL-----SEIDKKNAVHINALASVLVYAS 457
           II  G+  D  + + L+  Y KC  L+ + +V      S +  ++    N++        
Sbjct: 587 IIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFR 646

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL--EQGKAIHCLALKARYDQDIFV 515
              E +  +R +       +  + SIV+       +   E GK IH   L+   D D F+
Sbjct: 647 RFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFL 706

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGY-------------------- 554
           ++A+IDMY K G   DA R F +I  + ++  WN M++G+                    
Sbjct: 707 KTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNS 766

Query: 555 ----------AQHGCYHEVSNLFNK-----MSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
                     A   C    ++ F +     + K G+  D     ++L+     G+V EA 
Sbjct: 767 VKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAE 826

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
           T  SC+ D    I      A + +  G   L     M   Q  + PD+    +++S C++
Sbjct: 827 TVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMR--QKSVLPDSFTLSNVISCCSM 884

Query: 660 YGNIDLGLLAGSKL----LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +G  D G    ++L    ++  P  ES    L  LY+  G   D   + K M+EK
Sbjct: 885 FGLYDYGKSVHAELFKRPIQSTPAIESA---LLTLYSKCGCDTDAYLVFKSMEEK 936


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/765 (30%), Positives = 398/765 (52%), Gaps = 14/765 (1%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++S + K G   D +   T+IS          A   L   +    + +NA+I+  ++   
Sbjct: 245  LFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGL 304

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
                  L+  ++ QGL P   TF+S++ A  ++    E   +H   +K G  + V++ S 
Sbjct: 305  DSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSS 364

Query: 119  FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             I  Y K G I  A+  F    + + V + A++ G+V N   +++ ++F  MR   LE +
Sbjct: 365  LINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEAD 424

Query: 179  EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            +F+  +VLGA  ++     G Q+H   +K G  + +   + NA++++Y + G    A  +
Sbjct: 425  DFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADL--FVANAMLDMYSKLGAIDVAKAL 482

Query: 236  FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            F  I   D VSW+  I       +  EA  + K ++F    ++E +    +++      +
Sbjct: 483  FSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAI 542

Query: 293  RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
              GKQI +   K       ++G++LI +Y K G V  +R +  ++     V  N++I G 
Sbjct: 543  ETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGL 602

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +N   ++A+++F  +L+    P+ +T  SIL   +   S     QVH + +KS  L  D
Sbjct: 603  VQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQD 662

Query: 413  SMIS-CLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            + +   L+  Y KC  L ++ ++L E+ D KN V   A  S         ++L ++  + 
Sbjct: 663  TSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMR 722

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                  + +TF+ VLKAC+ M  L  GK IH L +K+ +       SA++DMY KCG + 
Sbjct: 723  SYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVI 782

Query: 531  DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             +   F+++  R ++  WN+M++G+A++G  +E   LF KM +  +KPD++T L VL +C
Sbjct: 783  SSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIAC 842

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             HAGL+ E   +   MS ++G++P+++HYAC++DLLGR G L+ A+  IDQ+P   D  I
Sbjct: 843  SHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVI 902

Query: 650  WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            W + L+AC ++ + + G +A  KL+E++P + STYV LS+L+A+AG W +    R+ M+E
Sbjct: 903  WATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMRE 962

Query: 710  KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K + K PG SWI VG     F   D+ H  +  IYK L  L   M
Sbjct: 963  KGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMM 1007



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 172/703 (24%), Positives = 320/703 (45%), Gaps = 71/703 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G          L+  + K  +   A R        D I + ++I+G  R  
Sbjct: 178 QVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVG 237

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   AL LF R+   G  PD  T  +++    S+                          
Sbjct: 238 RYQQALALFSRMEKMGSVPDQVTCVTIISTLASM-------------------------- 271

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
                 G +  A    +       VA+ A++  Y  +G   +   ++ +M+  GL     
Sbjct: 272 ------GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRS 325

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++L A+ ++    EG QIH   VK G  + V   + ++++NLYV+ G   DA K+FD
Sbjct: 326 TFASILSAAANMTAFDEGRQIHATAVKHGLDANV--FVGSSLINLYVKHGCISDAKKVFD 383

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
             TE ++V W+  +          E   +F+ +R  D + +++T +++L +      L  
Sbjct: 384 FSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDL 443

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+Q+     K G    + + NA++ MY K G ++ A+++F  +  KDSVSWN++I G + 
Sbjct: 444 GRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAH 503

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A++M   M  + +  +  + A+ + A SN  +++   Q+HS  IK     + ++
Sbjct: 504 NEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAV 563

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S LI  Y K   +  S++VL+ +D  + V INAL + LV  +   EA+EL++ +     
Sbjct: 564 GSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGF 623

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQDIFVESAVIDMYCKCGTIEDAK 533
           + +  TF+ +L  C        GK +HC  LK A  +QD  +  +++ +Y KC  +EDA 
Sbjct: 624 KPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDAN 683

Query: 534 RAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +   ++    +L  W A + GYAQ+G   +   +F +M  + V+ DE T+ +VL +C   
Sbjct: 684 KLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEM 743

Query: 593 GLVREARTYLSCMSDLHGLIPQ-------------LEHYACIVDLLGRVGLLEGAKMTID 639
             + + +       ++HGLI +             ++ Y+   D++    + +  K   +
Sbjct: 744 AALTDGK-------EIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQN 796

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
            MP       W S++      G  +  LL   K+ E  ++PD+
Sbjct: 797 IMP-------WNSMIVGFAKNGYANEALLLFQKMQESQIKPDD 832



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 258/547 (47%), Gaps = 57/547 (10%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLG 108
           Y  L++ L+R C+   A   FD     GL       +   +ACG      ++H   L+LG
Sbjct: 41  YTTLLASLSRECRH--AHHPFD----AGLHR-----THQARACG------VLHARILRLG 83

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEV 166
              R  L    ++ Y +SG +  A      C      + A ++++  +  +G      + 
Sbjct: 84  LPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARSGSPRDVLDA 143

Query: 167 FVEMR-SLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           F  +R S+G   ++F +  VL A   +   + G Q+H   +K GF S V       ++++
Sbjct: 144 FQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSV--FCQAGLVDM 201

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           Y +CG+  DA +MFD I  PD + W+  IA    G    G ++        +  ++ +  
Sbjct: 202 YAKCGEVDDARRMFDGIACPDTICWTSMIA----GYHRVGRYQQ------ALALFSRMEK 251

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           + SV            Q  C        V+I + L SM    G++ DAR++   +    +
Sbjct: 252 MGSVPD----------QVTC--------VTIISTLASM----GRLGDARTLLKRIRMTST 289

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           V+WN++IA YS++G  ++   ++  M +  L+P   T ASIL A +N  +  +  Q+H+ 
Sbjct: 290 VAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHAT 349

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            +K G   +  + S LI  Y K   ++++K+V     +KN V  NA+    V      E 
Sbjct: 350 AVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEET 409

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           +++++ +  +  E +  TF  VL AC  +  L+ G+ +HC+ +K   D D+FV +A++DM
Sbjct: 410 IQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDM 469

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y K G I+ AK  F  I       WNA+++G A +    E  N+  +M  +G+  DE+++
Sbjct: 470 YSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSF 529

Query: 583 LAVLTSC 589
              + +C
Sbjct: 530 ATAINAC 536



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 251/513 (48%), Gaps = 22/513 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           QI++  +K+G   +  + ++LI+ + K    +D ++ F F   +  ++I+ +NA++ G  
Sbjct: 345 QIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF---STEKNIVMWNAILYGFV 401

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           +       +++F  +R   L  D FTF S++ AC    SL     VH + +K G  + ++
Sbjct: 402 QNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLF 461

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y+K G I  A+  F      D+V++ A++ G   N E  ++  +   M+  G
Sbjct: 462 VANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYG 521

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNH-LNNAIMNLYVRCGQKL 230
           + L+E S    + A    + ++ G+QIH   +K    S   NH + +++++LY + G   
Sbjct: 522 IALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCS---NHAVGSSLIDLYSKFGDVE 578

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            + K+   +    +V  +  I          EA  LF+ +  + F+ + +T  ++LS   
Sbjct: 579 SSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCT 638

Query: 288 GERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSW 345
                  GKQ+  +  K   + +  S+G +L+ +Y KC  + DA  + + +   K+ V W
Sbjct: 639 RPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEW 698

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            + I+GY++NG+  Q+L MF  M  + +  +  T  S+L+A S   +L    ++H  I+K
Sbjct: 699 TATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVK 758

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALE 464
           SGF+  ++  S L+  Y KC  +  S  +  E+ +++N +  N++           EAL 
Sbjct: 759 SGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALL 818

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           L++ +  S  + +  T   VL AC+    + +G
Sbjct: 819 LFQKMQESQIKPDDVTLLGVLIACSHAGLISEG 851



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 175/365 (47%), Gaps = 16/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S  IK     +  + ++LI  ++KF D   + + L       I+  NALI+GL +  
Sbjct: 547 QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNN 606

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVYLV 116
           +   A++LF ++   G +P  FTF+S++  C     + I   VH   LK    +    L 
Sbjct: 607 REDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLG 666

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
              +  Y K   +  A     +  D  N V +TA + GY  NG   +S  +F  MRS  +
Sbjct: 667 ISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDV 726

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E + T+VL A  +   + +G++IHG  VK GF+S       +A+M++Y +CG  + +
Sbjct: 727 RSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVS--YETATSALMDMYSKCGDVISS 784

Query: 233 VKMFDEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            ++F E+    +++ W+  I   A +G   EA  LF+ ++ +  + ++ T++ +L +   
Sbjct: 785 FEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSH 844

Query: 289 ERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G     +     G +  V     LI + G+ G +  A+ + D L F+ D V W 
Sbjct: 845 AGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWA 904

Query: 347 SMIAG 351
           + +A 
Sbjct: 905 TYLAA 909



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 17/214 (7%)

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H+ I++ G  L   +   L+  YG+   +  + R L+      A    A + +    SC
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVL----SC 130

Query: 459 HA---------EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           HA         +A +  R   GS  +  G   ++VL AC+ +  LE G+ +HC  LK+ +
Sbjct: 131 HARSGSPRDVLDAFQRIRCSIGSTPDQFG--IAVVLSACSRLGALEHGRQVHCDVLKSGF 188

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
              +F ++ ++DMY KCG ++DA+R F  I C D++  W +M+ GY + G Y +   LF+
Sbjct: 189 CSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTIC-WTSMIAGYHRVGRYQQALALFS 247

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           +M K G  PD++T + ++++    G + +ART L
Sbjct: 248 RMEKMGSVPDQVTCVTIISTLASMGRLGDARTLL 281


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/757 (28%), Positives = 404/757 (53%), Gaps = 12/757 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + K+G   D  +ST ++  +  +     + +   +  +R+++++ +L+ G +   
Sbjct: 181 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 240

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    + ++  +R +G+  +  + S ++ +CG L++  +   + G  +K G  S++ + +
Sbjct: 241 EPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVEN 300

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +   G +  A   F    + D +++ ++V  Y  NG  ++S  +F  MR    E+
Sbjct: 301 SLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEV 360

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +++ +L    DV   K G  IHG  VK+GF S VC  + N ++ +Y   G+  +A  
Sbjct: 361 NSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVC--VCNTLLRMYAGAGRSEEADL 418

Query: 235 MFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   D++SW+  +A+   DG  ++A G+   +      +N  T  + L++      
Sbjct: 419 VFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF 478

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G+ +       G  +   IGNAL+SMYGK G ++ +R +   +  +D V+WN++I G
Sbjct: 479 FDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGG 538

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFLL 410
           Y+EN   ++AL  F  +    +  N  T+ S+L A +     L++   +H++I+ +GF  
Sbjct: 539 YAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFES 598

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D+ + + LIT Y KC  L+ S+ + + +D ++ +  NA+ +   +     E L+L   + 
Sbjct: 599 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMR 658

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                ++  +FS  L A A +  LE+G+ +H LA+K  ++ D F+ +A  DMY KCG I 
Sbjct: 659 SFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIG 718

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +  +        SL  WN ++    +HG + EV   F++M + G+KP  +T++++LT+C 
Sbjct: 719 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS 778

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV +   Y   ++   GL P +EH  C++DLLGR G L  A+  I +MP+ P+  +W
Sbjct: 779 HGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 838

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLL++C I+ ++D G  A   L +L+P+++S +VL SN++A+ G W DV  +RK+M  K
Sbjct: 839 RSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFK 898

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            + K+   SW+ +      F  GD +H Q+ EIY +L
Sbjct: 899 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 935



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 200/715 (27%), Positives = 350/715 (48%), Gaps = 56/715 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           +++L +K    L  + + TLI+ +TKF   + A R+LFD    R+ +++N ++SG+ R  
Sbjct: 80  LHALCVKGLVRLSVLHTNTLINMYTKFGRVKPA-RYLFDKMPVRNEVSWNTMMSGIVRVG 138

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
                ++ F ++   G++P +F  +SLV ACG      +E   VHG   K G  S VY+ 
Sbjct: 139 LYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVS 198

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y   G +  +   F +  D + V++T+++ GY   GE ++  +++  MR  G+E
Sbjct: 199 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVE 258

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NE S++ V+ +   +K+   G QI G  +K G  S +   + N++++++   G    A 
Sbjct: 259 CNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLA--VENSLISMFGNMGNVDYAN 316

Query: 234 KMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            +F++I+E D +SW+  +AA        +    F L +  RF+D ++N  T+  LLS +G
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMR--RFHD-EVNSTTVSTLLSVLG 373

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                + G+ I     K+GF  VV + N L+ MY   G+  +A  +F  +  KD +SWNS
Sbjct: 374 DVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNS 433

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           ++A +  +G    AL + C M+      N  T  S L A  + +   +   +H  ++ SG
Sbjct: 434 LMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSG 493

Query: 408 FLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            L D+ +I + L++ YGK   ++ S+RVL ++ +++ V  NAL           +AL  +
Sbjct: 494 -LFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAF 552

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +T+       N  T   VL AC    D LE+GK +H   + A ++ D  V++++I MY K
Sbjct: 553 QTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 612

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG +  ++  F  +   S+  WNA++   A HG   EV  L +KM  FG+  D+ ++   
Sbjct: 613 CGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEG 672

Query: 586 LTSCCHAGLVRE-----------------------ARTYLSC--MSDLHGLIP-----QL 615
           L++     ++ E                       A  Y  C  + ++  ++P      L
Sbjct: 673 LSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 732

Query: 616 EHYACIVDLLGRVGLLEGAKMTID---QMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             +  ++  LGR G  E    T     +M I P    + SLL+AC+  G +D GL
Sbjct: 733 PSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGL 787



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/467 (22%), Positives = 217/467 (46%), Gaps = 14/467 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE----- 249
           G  +H   VK G +     H  N ++N+Y + G+   A  +FD++   + VSW+      
Sbjct: 77  GRALHALCVK-GLVRLSVLH-TNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGI 134

Query: 250 -RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE-RILRAGKQIQAFCYKVGF 307
            R+    +G+E F    DL     + + + + +L+++ G    + R G Q+  F  K G 
Sbjct: 135 VRVGLYLEGMEFFQKMCDL---GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 191

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  V +  A++ +YG  G V+ +R +F+ +  ++ VSW S++ GYS+ G   + +D++  
Sbjct: 192 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKS 251

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    +  N  +M+ ++ +    K      Q+   +IKSG     ++ + LI+ +G    
Sbjct: 252 MRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGN 311

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           ++ +  + ++I +++ +  N++ +         E+  ++  +     EVN +T S +L  
Sbjct: 312 VDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSV 371

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
              +   + G+ IH L +K  +D  + V + ++ MY   G  E+A   F+++    L  W
Sbjct: 372 LGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISW 431

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N++M  +   G   +   +   M + G   + +T+ + L +C       + R  L  +  
Sbjct: 432 NSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRI-LHGLVV 490

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           + GL         +V + G++G +  ++  + QMP   D   W +L+
Sbjct: 491 VSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALI 536


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/724 (32%), Positives = 384/724 (53%), Gaps = 25/724 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           RD  ++  +I+      Q+  A+ +F R++ +G+R DA TF +++KAC   G L +   +
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   ++ G   +  L +  +  Y   G + SA + F + ++ D V++ A +     +G+ 
Sbjct: 151 HAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLF-ERMERDLVSWNAAIAANAQSGDL 209

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           D + E+F  M+  G+     +L   L     +++   IH    + G    +   ++ A+ 
Sbjct: 210 DMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLV--VSTALA 267

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEY 277
           + Y R G    A ++FD   E DVVSW+  + A A  G   EA  LF  +       ++ 
Sbjct: 268 SAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV 327

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T++N   +  G   LR G+ I A   + G    + +GNAL+ MY +CG   +AR +F+  
Sbjct: 328 TLVN---ASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG- 383

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           I  ++VSWN+MIAG S+ G   +AL++F  M    + P   T  ++LEAV+++    +AM
Sbjct: 384 IPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443

Query: 398 ----QVHSHIIKSGFLLDDSMISCLITTYGKCNALNES----KRVLSEIDKKNAVHINAL 449
               ++HS I+  G+  + ++ + ++  Y  C A++E+    +R   E D+ + V  NA+
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAME-DRHDVVSWNAI 502

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S L        AL  +R +       N  T   VL ACA    L +G  +H     +  
Sbjct: 503 ISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGM 562

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           + ++FV +A+  MY +CG++E A+  F K+   RD +  +NAM+  Y+Q+G   E   LF
Sbjct: 563 ESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVI-FNAMIAAYSQNGLAGEALKLF 621

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + G +PDE ++++VL++C H GL  E       M   +G+ P  +HYAC VD+LGR
Sbjct: 622 WRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGR 681

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L  A+  I  M + P   +W++LL AC  Y ++D G LA S + EL P +ES YV+L
Sbjct: 682 AGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVL 741

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+ A AG W++  ++R EM+ + L K+ G SWI +    H F AGD SH +S+EIY+EL
Sbjct: 742 SNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYREL 801

Query: 748 IKLY 751
            +L+
Sbjct: 802 ERLH 805



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 239/499 (47%), Gaps = 15/499 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ ++++G     +L+  L+  +        A   LF+   RD++++NA I+  A+   
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAM-LLFERMERDLVSWNAAIAANAQSGD 208

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              AL+LF R++ +G+RP   T    +  C  +++   +H +  + G    + + +    
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALAS 268

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YA+ G +  A+  F    + D V++ AM+  Y  +G   ++  +F  M   G+  ++ +
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT 328

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           L         ++ G  IH   ++ G    +   L NA++++Y RCG   +A  +F+ I  
Sbjct: 329 LVNASTGCSSLRFGRMIHACALEKGLDRDIV--LGNALLDMYTRCGSPEEARHLFEGIP- 385

Query: 242 PDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE----RILRA 294
            + VSW+  IA +    +   A  LF+ ++         T +NLL +V       R +  
Sbjct: 386 GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS---VSWNSMIAG 351
           G+++ +     G+    +IG A++ MY  CG +++A + F     +D    VSWN++I+ 
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            S++G   +AL  F  M    + PN  T  ++L+A + + +L + + VH H+  SG   +
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESN 565

Query: 412 DSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIW 470
             + + L + YG+C +L  ++ +  ++  +++ V  NA+ +         EAL+L+  + 
Sbjct: 566 VFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625

Query: 471 GSCREVNGSTFSIVLKACA 489
                 +  +F  VL AC+
Sbjct: 626 QEGSRPDEQSFVSVLSACS 644



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 196/416 (47%), Gaps = 13/416 (3%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           ++ LL + G +R+L  G++I A    +G  E   +GN L+ +Y KC  + D   +F  L 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D  SW ++I  Y+E+G   +A+ MF  M +  +  +  T  ++L+A +    L Q   
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H+ I++SG      + + L+  YG C  +  S  +L E  +++ V  NA  +    +  
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVA-SAMLLFERMERDLVSWNAAIAANAQSGD 208

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
              ALEL++ +          T  I L  CA    + Q +AIH +  ++  +Q + V +A
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTA 265

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +   Y + G ++ AK  F +     +  WNAM+  YAQHG   E + LF +M   G+ P 
Sbjct: 266 LASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPS 325

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           ++T +   T C     +R  R   +C  +  GL   +     ++D+  R G  E A+   
Sbjct: 326 KVTLVNASTGCSS---LRFGRMIHACALE-KGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL-LELQPDNESTYVLLSNLYAS 693
           +   IP +A  W ++++  +  G +   L    ++ LE      +TY+ L    AS
Sbjct: 382 E--GIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVAS 435



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 18/413 (4%)

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L  +L A+ D   + +G +IH   V +G    + NHL    + LY++C    D  ++F  
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELGNHL----LRLYLKCESLGDVEEVFSR 87

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   D  SW+  I A  +      A  +F  ++    + +  T + +L +      L  G
Sbjct: 88  LEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           + I A+  + G      + N L+ +YG CG V  A  +F+ +  +D VSWN+ IA  +++
Sbjct: 148 RSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQS 206

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  + AL++F  M    + P   T+   L   +    ++QA  +HS + +SG      + 
Sbjct: 207 GDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVS 263

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L + Y +   L+++K V     +++ V  NA+          +EA  L+  +     E
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM---LHE 320

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
               +   ++ A    + L  G+ IH  AL+   D+DI + +A++DMY +CG+ E+A+  
Sbjct: 321 GIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           F  I  ++++ WN M+ G +Q G       LF +M   G+ P   TYL +L +
Sbjct: 381 FEGIPGNAVS-WNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 240/759 (31%), Positives = 402/759 (52%), Gaps = 22/759 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLF-DR 71
           D +L+T LI+ ++    +    R +FD   N+++  +NAL+SG  R      A+  F + 
Sbjct: 142 DFVLNTRLITMYS-ICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLEL 200

Query: 72  LRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +     +PD FTF  L+KAC     +   + VHG+ +K+G    +++ +  I  Y K G 
Sbjct: 201 ISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGF 260

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-----NEFSLT 183
           +  A   F    + + +++ +++ G+  NG + ++   F  +   G  L        +L 
Sbjct: 261 LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320

Query: 184 AVLGASFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
            V     +V  G  IHG  VK+G +    VCN    A++++Y +CG   +A  +F +I  
Sbjct: 321 PVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN----ALIDMYSKCGCLSEAAILFRKIEN 376

Query: 242 PDVVSWSERIAA-ACDGV--EAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGK 296
             VVSW+  I A + +G   E F L + +   +   ++NE T++NLL +   E  L + +
Sbjct: 377 KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLR 436

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            +  +  +  F     I NA I+ Y KCG +  A  +F  +  K   SWN++I G+++NG
Sbjct: 437 ALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNG 496

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +ALD +  M    ++P+ +++ S+L A      L+   ++H  ++++G  ++  +  
Sbjct: 497 DPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAV 556

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ Y  C+     +     +  KN+V  NA+ S         EAL L+R +     E 
Sbjct: 557 SLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEP 616

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +    + +L AC+ ++ L  GK +HC ALK    +D FV  +++DMY K G +  ++R F
Sbjct: 617 DEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIF 676

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
            ++    +A WN M+ G+  HG  ++   LF  M +   +PD  T+L VL +CCHAGLV 
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E   YL+ M  L+ L P+LEHYAC++D+LGR G L  A   I++MP  PDA IW SLLS+
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS 796

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
              Y ++++G     KLL L+ +   +Y+LLSNLYA+AG W+ V  +R++MK+  L K+ 
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           G SWI + G  + F AG++S+  S EI K   +L + +V
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIV 895



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 323/696 (46%), Gaps = 42/696 (6%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDI--ITYNALISGLARFCQSGPALKLFDRLR 73
           IL  +L+S  T  + +          Q+R +  ++  +L+  +++ C++G      D L+
Sbjct: 33  ILKNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQ 92

Query: 74  YQGLRPDAFTFSS-------LVKACGSLQENEIVHGV----CLKLGFSSRVYLVSGFIEN 122
                   +  +        L++ CG  +  EI   +    C+   FS    L +  I  
Sbjct: 93  RAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITM 152

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFS 181
           Y+  G  + + + F   L+ +   + A+V GYV N  +D++   F+E+ S+   + + F+
Sbjct: 153 YSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFT 212

Query: 182 LTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
              ++ A     D+  G+ +HG  VK+G +  +   + NA++ LY +CG   +AV++FD+
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDL--FVGNAMIALYGKCGFLDEAVELFDK 270

Query: 239 ITEPDVVSWSERIAAACDG---VEAFGLFKD-LRFNDFQINEY-TMINLLSSVGGERILR 293
           + E +++SW+  I    +    +EA+  F+  L   D  I +  TM+ LL    GE  + 
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G  I     K+G +  + + NALI MY KCG +++A  +F  +  K  VSWNSMI  YS
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 354 ENGFFNQALDMFCHM-LEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             GF  +  D+   M +E  L+  N  T+ ++L A      L     +H + ++  F   
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           + + +  I  Y KC +L  ++ V   ++ K+    NA+           +AL+ Y  +  
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM-- 508

Query: 472 SCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           +   +    FSIV  L AC  +  L+ GK IH   L+   + + FV  +++ +Y  C   
Sbjct: 509 TRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKP 568

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
              +  F ++   +   WNAM+ GY+Q+   +E  +LF +M   G++PDEI   ++L +C
Sbjct: 569 FYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628

Query: 590 CH---AGLVREARTYLSCMSDLHGLIPQLEHYAC-IVDLLGRVGLLEGAKMTIDQMPIPP 645
                 GL +E   +      L   + +    AC ++D+  + G L  ++   +++    
Sbjct: 629 SQLSALGLGKEVHCF-----ALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN-GK 682

Query: 646 DAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPD 679
           +   W  +++   ++  GN  + L    K  + QPD
Sbjct: 683 EVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 718



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 156/337 (46%), Gaps = 18/337 (5%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +++      +++   I+ + K      A    F    + + ++NA+I G A+      AL
Sbjct: 443 LRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKAL 502

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
             +  +   G+ PD F+  SL+ ACG    LQ  + +HG  L+ G     ++    +  Y
Sbjct: 503 DFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLY 562

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
               +       F    D ++V + AM+ GY  N   +++  +F +M S GLE +E ++ 
Sbjct: 563 FHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIA 622

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++LGA   +     G+++H F +K   +    N +  ++M++Y + G    + ++F+ + 
Sbjct: 623 SILGACSQLSALGLGKEVHCFALKNSLMED--NFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-- 295
             +V SW+  I        G +A  LF+D++ +D Q + +T + +L +     ++  G  
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLN 740

Query: 296 --KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
              Q+Q        +E  +    +I M G+ G++N+A
Sbjct: 741 YLAQMQTLYKLEPELEHYA---CVIDMLGRAGRLNEA 774



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/91 (21%), Positives = 46/91 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   +KN    D  ++ +L+  + K      + R       +++ ++N +I+G     
Sbjct: 639 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 698

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           Q   A++LF+ ++    +PD FTF  +++AC
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQAC 729


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/678 (32%), Positives = 358/678 (52%), Gaps = 11/678 (1%)

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+ PD +TF  ++K C  L      +++  + L++GF   +++ S  I+ YA +G I  A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
              F   +D D V +  M+ GYV  GE D + ++F +M S   + +  +   VL  S   
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             V+ G Q+HG  V+ G        + N ++ +Y +  Q  DA K+FD + + D+V W+ 
Sbjct: 125 AMVEYGRQLHGLVVRSGL--DFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNR 182

Query: 250 RIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I          +A  LF ++     + +  T  + L S+     L+  K+I  +  + G
Sbjct: 183 MIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHG 242

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
            +  V + +ALI +Y KC     A  +F+     D V + +MI+GY  NG    AL++F 
Sbjct: 243 VILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFR 302

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            +L+  +IPN  T +SIL A +   ++K   ++H +IIK+       + S ++  Y KC 
Sbjct: 303 WLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCG 362

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L+ +  +   I  K+A+  N++ +         EA+ L+R +     + +  T S  L 
Sbjct: 363 RLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALS 422

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACA +  L  GK IH   +K  ++ D+F  SA+I+MY KCG +  A+  F  +   +   
Sbjct: 423 ACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVA 482

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN+++  Y  HG   +   LF+ M + G++PD IT+L +L+SC HAG V +   Y  CM+
Sbjct: 483 WNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMT 542

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           + +G+  Q+EHYAC+ DL GR G L+ A   I  MP PP A +W +LL AC ++GN++L 
Sbjct: 543 EEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELA 602

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
            +A   LL+L+P N   Y+LL+++ A AG W  V K++  MKE+ + K PG SWI V   
Sbjct: 603 EVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNT 662

Query: 727 THHFYAGDSSHSQSKEIY 744
           T  F+A D SH +S +IY
Sbjct: 663 TCVFFAADGSHPESPQIY 680



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 283/568 (49%), Gaps = 13/568 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I  ++++ G  LD  ++++LI  +        A RF     ++D + +N +I+G  +  +
Sbjct: 32  IQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGE 91

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           S  A+KLF  +     +PD+ TF+ ++    S   ++    +HG+ ++ G      + + 
Sbjct: 92  SDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNT 151

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y+K  ++  A   F     +D V +  M+ GYV NG  D +  +F EM S G++ +
Sbjct: 152 LVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPD 211

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             + T+ L +   S  +K+ ++IHG+ V+ G +  V  +LN+A+++LY +C   + A KM
Sbjct: 212 SITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDV--YLNSALIDLYFKCRDAVMACKM 269

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+  T+ D+V ++  I+    +G+  +A  +F+ L       N  T  ++L +  G   +
Sbjct: 270 FNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAI 329

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           + G+++  +  K    E   +G+A+++MY KCG+++ A  IF  +  KD++ WNS+I  +
Sbjct: 330 KLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSF 389

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           S++G   +A+ +F  M    +  +  T+++ L A +N  +L    ++H  +IK  F  D 
Sbjct: 390 SQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDL 449

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
             +S LI  Y KC  LN ++ V + + +KN V  N++ +   Y    A++L L+  +   
Sbjct: 450 FDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEE 509

Query: 473 CREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
             + +  TF  +L +C     +E G +   C+  +      +   + + D++ + G +++
Sbjct: 510 GIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDE 569

Query: 532 AKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           A      +     A  W  ++     HG
Sbjct: 570 AFEVITSMPFPPAASVWGTLLGACRVHG 597



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 181/367 (49%), Gaps = 13/367 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  ++++G  LD  L++ LI  + K  D   A +    +   DI+ Y A+ISG     
Sbjct: 233 EIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNG 292

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  AL++F  L  + + P+A TFSS++ AC  L   ++   +HG  +K     +  + S
Sbjct: 293 MNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGS 352

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G +  A + F      D + + +++  +  +G+ +++  +F +M   G++ 
Sbjct: 353 AIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKY 412

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +++A L A  ++     G++IHGF +K  F S + +   +A++N+Y +CG+   A  
Sbjct: 413 DCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDM--SALINMYAKCGKLNIARL 470

Query: 235 MFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + E + V+W+  IAA    G   ++  LF ++     Q +  T + +LSS G    
Sbjct: 471 VFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQ 530

Query: 292 LRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           +  G +  +    + G    +     +  ++G+ G +++A  +   + F  + S W +++
Sbjct: 531 VEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLL 590

Query: 350 AGYSENG 356
                +G
Sbjct: 591 GACRVHG 597



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 121/245 (49%), Gaps = 7/245 (2%)

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + P+ YT   +++  +   +++    +   I++ GF LD  + S LI  Y     
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + +++R   ++  K+ V  N + +  V       A++L++ +  S  + +  TF+ VL  
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
             +   +E G+ +H L +++  D    V + ++ +Y K   + DA++ F  + +  L  W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N M+ GY Q+G   + S LFN+M   G+KPD IT+ + L S   +  +++ +       +
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIK-------E 233

Query: 608 LHGLI 612
           +HG I
Sbjct: 234 IHGYI 238


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/706 (32%), Positives = 382/706 (54%), Gaps = 24/706 (3%)

Query: 65  ALKLFDRLRYQGLRP-DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFI 120
           A+   D +   G+RP D+ TFSSL+K+C   ++    ++VH   ++        L +  I
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 121 ENYAKSGEIVSAEMCF---RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             Y+KSG+   AE  F   R     D V+++AM+  Y  NG    + +VFVE   LGL  
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD-A 232
           N++  TAV+ A  +   V  G    GF +K G F S VC  +  ++++++V+     + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC--VGCSLIDMFVKGENSFENA 222

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD+++E +VV+W+  I          EA   F D+  + F+ +++T+ ++ S+    
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWN 346
             L  GKQ+ ++  + G ++ V    +L+ MY KC   G V+D R +FD +     +SW 
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 347 SMIAGYSEN-GFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           ++I GY +N     +A+++F  M+    + PN +T +S  +A  N    +   QV     
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G   + S+ + +I+ + K + + +++R    + +KN V  N             +A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L   I      V+  TF+ +L   A +  + +G+ IH   +K     +  V +A+I MY 
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG+I+ A R F  +   ++  W +M+ G+A+HG    V   FN+M + GVKP+E+TY+A
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L++C H GLV E   + + M + H + P++EHYAC+VDLL R GLL  A   I+ MP  
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            D  +W++ L AC ++ N +LG LA  K+LEL P+  + Y+ LSN+YA AG W +  ++R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           ++MKE+ L KE G SWI VG   H FY GD++H  + +IY EL +L
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 129/551 (23%), Positives = 271/551 (49%), Gaps = 24/551 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
           +++ LI+     D +L  +LIS ++K  D  +A   F  +     RD+++++A+++    
Sbjct: 84  VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLG-FSSRVY 114
             +   A+K+F      GL P+ + ++++++AC +   +    +  G  +K G F S V 
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203

Query: 115 LVSGFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +    I+ + K      +A   F    +L+ V +T M+   +  G   ++   F++M   
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263

Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC---G 227
           G E ++F+L++V  A  +++    G+Q+H + ++    SG+ + +  +++++Y +C   G
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIR----SGLVDDVECSLVDMYAKCSADG 319

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACD-GVEAFGLFKDL-RFNDFQINEYTMINL 282
              D  K+FD + +  V+SW+  I      C+   EA  LF ++      + N +T  + 
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
             + G     R GKQ+    +K G     S+ N++ISM+ K  ++ DA+  F+ L  K+ 
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VS+N+ + G   N  F QA  +   + E  L  + +T AS+L  V+N  S+++  Q+HS 
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           ++K G   +  + + LI+ Y KC +++ + RV + ++ +N +   ++ +           
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVID 521
           LE +  +     + N  T+  +L AC+ +  + +G +  + +    +    +   + ++D
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619

Query: 522 MYCKCGTIEDA 532
           + C+ G + DA
Sbjct: 620 LLCRAGLLTDA 630



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/609 (23%), Positives = 271/609 (44%), Gaps = 76/609 (12%)

Query: 5   LLIKNGH-HLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
            L+K GH   D  +  +LI  F K  + F  A++        +++T+  +I+   +    
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGF 119
             A++ F  +   G   D FT SS+  AC  L+     + +H   ++ G    V      
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSL 308

Query: 120 IENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLG- 174
           ++ YAK    G +      F    D   +++TA++ GY+ N     ++  +F EM + G 
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E N F+ ++     G   D + G+Q+ G   K G  S   + + N++++++V+  +  D
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN--SSVANSVISMFVKSDRMED 426

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A + F+ ++E ++VS++  +   C  +   +AF L  ++   +  ++ +T  +LLS V  
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +R G+QI +   K+G      + NALISMY KCG ++ A  +F+++  ++ +SW SM
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I G++++GF  + L+ F  M+E  + PN  T  +IL A S           H  ++  G 
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS-----------HVGLVSEG- 594

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                        +   N++ E  ++  +++     H   +  +L  A    +A E   T
Sbjct: 595 -------------WRHFNSMYEDHKIKPKME-----HYACMVDLLCRAGLLTDAFEFINT 636

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI---DMYCK 525
           +      +   TF   L AC   ++ E GK    LA +   + D    +A I   ++Y  
Sbjct: 637 MPFQADVLVWRTF---LGACRVHSNTELGK----LAARKILELDPNEPAAYIQLSNIYAC 689

Query: 526 CGTIEDAKRAFRKICRDSL---AGWNAMMMG-------------YAQHGCYHEVSNLFNK 569
            G  E++    RK+   +L    G + + +G                H  Y E+  L  +
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749

Query: 570 MSKFGVKPD 578
           + + G  PD
Sbjct: 750 IKRCGYVPD 758



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+     K G   +  ++ ++IS F K     D +RAF  L     +++++YN  + G  
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL---SEKNLVSYNTFLDGTC 450

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVY 114
           R      A KL   +  + L   AFTF+SL   V   GS+++ E +H   +KLG S    
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y+K G I +A   F    + + +++T+M+ G+  +G   +  E F +M   G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570

Query: 175 LELNEFSLTAVLGA 188
           ++ NE +  A+L A
Sbjct: 571 VKPNEVTYVAILSA 584



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 53/91 (58%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++K G   +  +   LIS ++K      A R     +NR++I++ ++I+G A+  
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +   L+ F+++  +G++P+  T+ +++ AC
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/702 (32%), Positives = 380/702 (54%), Gaps = 18/702 (2%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A+   + + +QG  PD  T+S  +K C    S     +VH    +         ++  I 
Sbjct: 50  AISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLIS 109

Query: 122 NYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
            Y+K G+   A   F+      D ++++AMV  +  N    ++   FV+M   G   NE+
Sbjct: 110 LYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEY 169

Query: 181 SLTAVLGASFD---VKEGEQIHGFGVKVGFL-SGVCNHLNNAIMNLYVRC-GQKLDAVKM 235
              A   A      V  G+ I GF VK G+L S VC  +   +++++V+  G  + A K+
Sbjct: 170 CFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVC--VGCGLIDMFVKGRGDLVSAFKV 227

Query: 236 FDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+++ E + V+W+    R+       EA  LF ++  + ++ + +T+  ++S+     +L
Sbjct: 228 FEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELL 287

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWNSMI 349
             G+Q+ +   + G      +G  LI+MY KC   G +  AR IFD ++  +  SW +MI
Sbjct: 288 LLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMI 347

Query: 350 AGYSENGFFNQ-ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            GY + G +++ ALD+F  M+   +IPN +T +S L+A +N  +L+   QV +H +K GF
Sbjct: 348 TGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGF 407

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              + + + LI+ Y +   ++++++    + +KN +  N +           EALEL+  
Sbjct: 408 SSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNE 467

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I       +  TF+ +L   A++  + +G+ IH   +K+    +  V +A+I MY +CG 
Sbjct: 468 IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGN 527

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           IE A + F  +   ++  W +++ G+A+HG   +   LF+KM + GV+P+ +TY+AVL++
Sbjct: 528 IESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSA 587

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV E   +   M   HG+IP++EHYAC+VD+LGR G L  A   I+ MP   DA 
Sbjct: 588 CSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADAL 647

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++ L AC ++GN++LG  A   ++E +P + + Y+LLSNLYAS   W++V  +RK MK
Sbjct: 648 VWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMK 707

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           EK L KE G SW+ V    H FY GD+SH ++ EIY EL  L
Sbjct: 708 EKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNL 749



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 242/489 (49%), Gaps = 37/489 (7%)

Query: 2   IYSLLIKNGH-HLDPILSTTLISHFTK-FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           I+  ++K G+   D  +   LI  F K   D   AF+       R+ +T+  +I+ L +F
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLV 116
             +G A+ LF  +   G  PD FT S ++ AC +++     + +H   ++ G +    + 
Sbjct: 250 GYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309

Query: 117 SGFIENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEMRS 172
              I  YAK    G + +A   F   LD +  ++TAM+ GYV  G +D+   ++F  M  
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  N F+ ++ L A  +   ++ GEQ+    VK+GF S  C  + N+++++Y R G+ 
Sbjct: 370 THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC--VANSLISMYARSGRI 427

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K FD + E +++S++  I A    +   EA  LF ++       + +T  +LLS  
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G+QI A   K G     S+ NALISMY +CG +  A  +F+ +  ++ +SW 
Sbjct: 488 ASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWT 547

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIK 405
           S+I G++++GF  QAL++F  MLE  + PN  T  ++L A S+   + +  +   S   +
Sbjct: 548 SIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTE 607

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G +      +C++   G+  +L+E+ + ++ +  K                  A+AL +
Sbjct: 608 HGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYK------------------ADAL-V 648

Query: 466 YRTIWGSCR 474
           +RT  G+CR
Sbjct: 649 WRTFLGACR 657



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 148/351 (42%), Gaps = 14/351 (3%)

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG  ++A+    HM+     P+  T +  L+    ++S      VH  + +S   LD   
Sbjct: 44  NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103

Query: 415 ISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           ++ LI+ Y KC    ++  +   +   ++ +  +A+ S     +    AL  +  +  + 
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ-DIFVESAVIDMYCKC-GTIED 531
              N   F+   +AC+    +  G +I    +K  Y Q D+ V   +IDM+ K  G +  
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A + F K+   +   W  M+    Q G   E  +LF +M   G +PD  T   V+++C +
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV---GLLEGAKMTIDQMPIPPDAH 648
             L+   +  L   +  HGL        C++++  +    G +  A+   DQ+ +  +  
Sbjct: 284 MELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNVF 341

Query: 649 IWQSLLSACTIYGNID---LGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            W ++++     G  D   L L  G  L  + P++   +   S L A A +
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH---FTFSSTLKACANL 389



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 59/91 (64%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK+G  L+  +   LIS +++  +   AF+   D ++R++I++ ++I+G A+  
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL+LF ++  +G+RP+  T+ +++ AC
Sbjct: 558 FATQALELFHKMLEEGVRPNLVTYIAVLSAC 588


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/706 (32%), Positives = 382/706 (54%), Gaps = 24/706 (3%)

Query: 65  ALKLFDRLRYQGLRP-DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFI 120
           A+   D +   G+RP D+ TFSSL+K+C   ++    ++VH   ++        L +  I
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 121 ENYAKSGEIVSAEMCF---RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             Y+KSG+   AE  F   R     D V+++AM+  Y  NG    + +VFVE   LGL  
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD-A 232
           N++  TAV+ A  +   V  G    GF +K G F S VC  +  ++++++V+     + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC--VGCSLIDMFVKGENSFENA 222

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD+++E +VV+W+  I          EA   F D+  + F+ +++T+ ++ S+    
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWN 346
             L  GKQ+ ++  + G ++ V    +L+ MY KC   G V+D R +FD +     +SW 
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 347 SMIAGYSEN-GFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           ++I GY +N     +A+++F  M+    + PN +T +S  +A  N    +   QV     
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G   + S+ + +I+ + K + + +++R    + +KN V  N             +A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L   I      V+  TF+ +L   A +  + +G+ IH   +K     +  V +A+I MY 
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG+I+ A R F  +   ++  W +M+ G+A+HG    V   FN+M + GVKP+E+TY+A
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L++C H GLV E   + + M + H + P++EHYAC+VDLL R GLL  A   I+ MP  
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            D  +W++ L AC ++ N +LG LA  K+LEL P+  + Y+ LSN+YA AG W +  ++R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           ++MKE+ L KE G SWI VG   H FY GD++H  + +IY EL +L
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/551 (23%), Positives = 271/551 (49%), Gaps = 24/551 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
           +++ LI+     D +L  +LIS ++K  D  +A   F  +     RD+++++A+++    
Sbjct: 84  VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLG-FSSRVY 114
             +   A+K+F      GL P+ + ++++++AC +   +    +  G  +K G F S V 
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203

Query: 115 LVSGFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +    I+ + K      +A   F    +L+ V +T M+   +  G   ++   F++M   
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263

Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC---G 227
           G E ++F+L++V  A  +++    G+Q+H + ++    SG+ + +  +++++Y +C   G
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIR----SGLVDDVECSLVDMYAKCSADG 319

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACD-GVEAFGLFKDL-RFNDFQINEYTMINL 282
              D  K+FD + +  V+SW+  I      C+   EA  LF ++      + N +T  + 
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
             + G     R GKQ+    +K G     S+ N++ISM+ K  ++ DA+  F+ L  K+ 
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VS+N+ + G   N  F QA  +   + E  L  + +T AS+L  V+N  S+++  Q+HS 
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           ++K G   +  + + LI+ Y KC +++ + RV + ++ +N +   ++ +           
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVID 521
           LE +  +     + N  T+  +L AC+ +  + +G +  + +    +    +   + ++D
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619

Query: 522 MYCKCGTIEDA 532
           + C+ G + DA
Sbjct: 620 LLCRAGLLTDA 630



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/609 (23%), Positives = 271/609 (44%), Gaps = 76/609 (12%)

Query: 5   LLIKNGH-HLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
            L+K GH   D  +  +LI  F K  + F  A++        +++T+  +I+   +    
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGF 119
             A++ F  +   G   D FT SS+  AC  L+     + +H   ++ G    V      
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SL 308

Query: 120 IENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLG- 174
           ++ YAK    G +      F    D   +++TA++ GY+ N     ++  +F EM + G 
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E N F+ ++     G   D + G+Q+ G   K G  S   + + N++++++V+  +  D
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN--SSVANSVISMFVKSDRMED 426

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A + F+ ++E ++VS++  +   C  +   +AF L  ++   +  ++ +T  +LLS V  
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +R G+QI +   K+G      + NALISMY KCG ++ A  +F+++  ++ +SW SM
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I G++++GF  + L+ F  M+E  + PN  T  +IL A S           H  ++  G 
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS-----------HVGLVSEG- 594

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                        +   N++ E  ++  +++     H   +  +L  A    +A E   T
Sbjct: 595 -------------WRHFNSMYEDHKIKPKME-----HYACMVDLLCRAGLLTDAFEFINT 636

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI---DMYCK 525
           +      +   TF   L AC   ++ E GK    LA +   + D    +A I   ++Y  
Sbjct: 637 MPFQADVLVWRTF---LGACRVHSNTELGK----LAARKILELDPNEPAAYIQLSNIYAC 689

Query: 526 CGTIEDAKRAFRKICRDSL---AGWNAMMMG-------------YAQHGCYHEVSNLFNK 569
            G  E++    RK+   +L    G + + +G                H  Y E+  L  +
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749

Query: 570 MSKFGVKPD 578
           + + G  PD
Sbjct: 750 IKRCGYVPD 758



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+     K G   +  ++ ++IS F K     D +RAF  L     +++++YN  + G  
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL---SEKNLVSYNTFLDGTC 450

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVY 114
           R      A KL   +  + L   AFTF+SL   V   GS+++ E +H   +KLG S    
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y+K G I +A   F    + + +++T+M+ G+  +G   +  E F +M   G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570

Query: 175 LELNEFSLTAVLGA 188
           ++ NE +  A+L A
Sbjct: 571 VKPNEVTYVAILSA 584



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 53/91 (58%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++K G   +  +   LIS ++K      A R     +NR++I++ ++I+G A+  
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +   L+ F+++  +G++P+  T+ +++ AC
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 224/678 (33%), Positives = 365/678 (53%), Gaps = 24/678 (3%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW--- 156
            H   +  G +   +L +  +  Y+K G + SA   F    + D V + A++  Y     
Sbjct: 99  THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 158

Query: 157 --NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGV 211
             +G   +   +F  +R+        +L  VL    +   +   E +HG+ +K+G    V
Sbjct: 159 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 218

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVE--AFGLFKDLR 268
              ++ A++N+Y +CG+  DA  +FD + E DVV W+  +      G+E  AF LF +  
Sbjct: 219 --FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276

Query: 269 FNDFQINEYTMINLLSSV--GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
            +  + +E+++  +L+     G   L  GKQ+     K G    VS+ N+L++MY K G 
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 336

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
              AR +F+ +   D +SWNSMI+  +++    +++++F  +L   L P+ +T+ASI  A
Sbjct: 337 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLA 396

Query: 387 VSNSKS-----LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
            +         L Q  Q+H+H IK+GF  D  + S ++  Y KC  +  +  V + I   
Sbjct: 397 TAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAP 456

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           + V   ++ S  V      +AL +Y  +  S    +  TF+ ++KA + +T LEQG+ +H
Sbjct: 457 DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 516

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
              +K     D FV ++++DMY KCG IEDA R F+K+   ++A WNAM++G AQHG   
Sbjct: 517 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE 576

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           E  NLF  M   G++PD ++++ +L++C HAGL  EA  YL  M + +G+ P++EHY+C+
Sbjct: 577 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 636

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           VD LGR GL++ A   I+ MP    A I ++LL AC I G+++ G    ++L  L+P + 
Sbjct: 637 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDS 696

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSK 741
           + YVLLSN+YA+A  W+DV   RK MK K + K+PG+SWI V    H F   D SH Q+ 
Sbjct: 697 AAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQAD 756

Query: 742 EIYKELIKLYEHMVATAK 759
            IY ++    E M+ T +
Sbjct: 757 IIYDKV----EEMMKTIR 770



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 284/574 (49%), Gaps = 26/574 (4%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           ++ ++ +G   D  LS  L++ ++K      A +    T  RD++T+NA++   A    S
Sbjct: 100 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 159

Query: 63  G-----PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
                   L LF  LR         T + ++K C   G L   E VHG  +K+G    V+
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +    +  Y+K G +  A + F    + D V +  M+ GYV  G   ++ ++F E    G
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 279

Query: 175 LELNEFSLTAVLGASF-----DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           L  +EFS+  +L         D++ G+Q+HG  VK G  S V   + N+++N+Y + G  
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS--VANSLVNMYSKMGCA 337

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++F+++   D++SW+  I++        E+  LF DL     + + +T+ ++  + 
Sbjct: 338 YFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLAT 397

Query: 287 GGER-----ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
             +      +L  GKQI A   K GF   + + + ++ MY KCG + +A  +F+Y+   D
Sbjct: 398 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPD 457

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V+W SMI+G  +NG  +QAL ++  M +  ++P+ YT A++++A S   +L+Q  Q+H+
Sbjct: 458 DVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHA 517

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           ++IK   + D  + + L+  Y KC  + ++ R+  +++ +N    NA+   L       E
Sbjct: 518 NVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEE 577

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           A+ L++++     E +  +F  +L AC  A +T  E  + +H +      + +I   S +
Sbjct: 578 AVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS-EAYEYLHSMPNDYGIEPEIEHYSCL 636

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           +D   + G +++A +    +   + A  N  ++G
Sbjct: 637 VDALGRAGLVQEADKVIETMPFKASASINRALLG 670



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 231/464 (49%), Gaps = 21/464 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           ++   IK G   D  +S  L++ ++K    R A R LFD  + RD++ +N ++ G  +  
Sbjct: 205 VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA-RLLFDWMRERDVVLWNMMLKGYVQLG 263

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-----GSLQENEIVHGVCLKLGFSSRVYL 115
               A +LF      GLRPD F+   ++  C       L+  + VHG+ +K G  S V +
Sbjct: 264 LEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSV 323

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y+K G    A   F D   LD +++ +M+     +   ++S  +F+++   GL
Sbjct: 324 ANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGL 383

Query: 176 ELNEFSLTAVLGASFD--------VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           + + F+L ++  A+          + +G+QIH   +K GF S +  H+N+ I+++Y++CG
Sbjct: 384 KPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL--HVNSGILDMYIKCG 441

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLS 284
             ++A  +F+ I+ PD V+W+  I+   D     +A  ++  +R +    +EYT   L+ 
Sbjct: 442 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 501

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +      L  G+Q+ A   K+  +    +G +L+ MY KCG + DA  +F  +  ++   
Sbjct: 502 ASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL 561

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHI 403
           WN+M+ G +++G   +A+++F  M    + P+  +   IL A S++    +A + +HS  
Sbjct: 562 WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMP 621

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
              G   +    SCL+   G+   + E+ +V+  +  K +  IN
Sbjct: 622 NDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 665



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 190/371 (51%), Gaps = 27/371 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ + +K+G   D  ++ +L++ ++K      A     D ++ D+I++N++IS  A+  
Sbjct: 307 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 366

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLV-----KACGSL---QENEIVHGVCLKLGFSSR 112
               ++ LF  L ++GL+PD FT +S+      KACG L    + + +H   +K GF S 
Sbjct: 367 LEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 426

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           +++ SG ++ Y K G++V+A + F      D+VA+T+M+ G V NG  D++  ++  MR 
Sbjct: 427 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 486

Query: 173 LGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  +E++   ++ AS  V   ++G Q+H   +K+  +S     +  +++++Y +CG  
Sbjct: 487 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD--PFVGTSLVDMYAKCGNI 544

Query: 230 LDAVKMFDEITEPDVVSWSER---IAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA ++F ++   ++  W+     +A   +  EA  LFK ++ +  + +  + I +LS+ 
Sbjct: 545 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 604

Query: 287 GGERILRAGKQIQAFCY------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
                  AG   +A+ Y        G    +   + L+   G+ G V +A  + + + FK
Sbjct: 605 S-----HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 659

Query: 341 DSVSWNSMIAG 351
            S S N  + G
Sbjct: 660 ASASINRALLG 670



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 12/189 (6%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L+   +  +L  GK  H   + +    D F+ + ++ MY KCG++  A++ F       
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 544 LAGWNAMMMGYA-----QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           L  WNA++  YA       G   E  +LF  +         +T   VL  C ++G +  A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
                    + GL   +     +V++  + G +  A++  D M    D  +W  +L    
Sbjct: 203 EGVHGYAIKI-GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLK--- 257

Query: 659 IYGNIDLGL 667
             G + LGL
Sbjct: 258 --GYVQLGL 264


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 240/759 (31%), Positives = 402/759 (52%), Gaps = 22/759 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLF-DR 71
           D +L+T LI+ ++    +    R +FD   N+++  +NAL+SG  R      A+  F + 
Sbjct: 142 DFVLNTRLITMYS-ICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLEL 200

Query: 72  LRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +     +PD FTF  L+KAC     +   + VHG+ +K+G    +++ +  I  Y K G 
Sbjct: 201 ISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGF 260

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-----NEFSLT 183
           +  A   F    + + +++ +++ G+  NG + ++   F  +   G  L        +L 
Sbjct: 261 LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320

Query: 184 AVLGASFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
            V     +V  G  IHG  VK+G +    VCN    A++++Y +CG   +A  +F +I  
Sbjct: 321 PVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN----ALIDMYSKCGCLSEAAILFRKIEN 376

Query: 242 PDVVSWSERIAA-ACDGV--EAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGK 296
             VVSW+  I A + +G   E F L + +   +   ++NE T++NLL +   E  L + +
Sbjct: 377 KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLR 436

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            +  +  +  F     I NA I+ Y KCG +  A  +F  +  K   SWN++I G+++NG
Sbjct: 437 ALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNG 496

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +ALD +  M    ++P+ +++ S+L A      L+   ++H  ++++G  ++  +  
Sbjct: 497 DPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAV 556

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ Y  C+     +     +  KN+V  NA+ S         EAL L+R +     E 
Sbjct: 557 SLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEP 616

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +    + +L AC+ ++ L  GK +HC ALK    +D FV  +++DMY K G +  ++R F
Sbjct: 617 DEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIF 676

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
            ++    +A WN M+ G+  HG  ++   LF  M +   +PD  T+L VL +CCHAGLV 
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E   YL+ M  L+ L P+LEHYAC++D+LGR G L  A   I++MP  PDA IW SLLS+
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSS 796

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
              Y ++++G     KLL L+ +   +Y+LLSNLYA+AG W+ V  +R++MK+  L K+ 
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           G SWI + G  + F AG++S+  S EI K   +L + +V
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIV 895



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 174/696 (25%), Positives = 322/696 (46%), Gaps = 42/696 (6%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDI--ITYNALISGLARFCQSGPALKLFDRLR 73
           IL  +L+S  T  + +          Q+R +  ++  +L+  +++ C++G      D L+
Sbjct: 33  ILKNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQ 92

Query: 74  YQGLRPDAFTFSS-------LVKACGSLQENEIVHGV----CLKLGFSSRVYLVSGFIEN 122
                   +  +        L++ CG  +  EI   +    C+   FS    L +  I  
Sbjct: 93  RAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITM 152

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFS 181
           Y+  G  + + + F   L+ +   + A+V GYV N  +D++   F+E+ S+   + + F+
Sbjct: 153 YSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFT 212

Query: 182 LTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
              ++ A     D+  G+ +HG  VK+G +  +   + NA++ LY +CG   +AV++FD+
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDL--FVGNAMIALYGKCGFLDEAVELFDK 270

Query: 239 ITEPDVVSWSERIAAACDG---VEAFGLFKD-LRFNDFQINEY-TMINLLSSVGGERILR 293
           + E +++SW+  I    +    +EA+  F+  L   D  I +  TM+ LL    GE  + 
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G  I     K+G +  + + NALI MY KCG +++A  +F  +  K  VSWNSMI  YS
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390

Query: 354 ENGFFNQALDMFCHM-LEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             GF  +  D+   M +E  L+  N  T+ ++L A      L     +H + ++  F   
Sbjct: 391 REGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK 450

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           + + +  I  Y KC +L  ++ V   ++ K+    NA+           +AL+ Y  +  
Sbjct: 451 ELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM-- 508

Query: 472 SCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           +   +    FSIV  L AC  +  L+ GK IH   L+   + + FV  +++ +Y  C   
Sbjct: 509 TRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKP 568

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
              +  F  +   +   WNAM+ GY+Q+   +E  +LF +M   G++PDEI   ++L +C
Sbjct: 569 FYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628

Query: 590 CH---AGLVREARTYLSCMSDLHGLIPQLEHYAC-IVDLLGRVGLLEGAKMTIDQMPIPP 645
                 GL +E   +      L   + +    AC ++D+  + G L  ++   +++    
Sbjct: 629 SQLSALGLGKEVHCF-----ALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN-GK 682

Query: 646 DAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPD 679
           +   W  +++   ++  GN  + L    K  + QPD
Sbjct: 683 EVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 718



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 156/337 (46%), Gaps = 18/337 (5%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +++      +++   I+ + K      A    F    + + ++NA+I G A+      AL
Sbjct: 443 LRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKAL 502

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
             +  +   G+ PD F+  SL+ ACG    LQ  + +HG  L+ G     ++    +  Y
Sbjct: 503 DFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLY 562

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
               +       F    D ++V + AM+ GY  N   +++  +F +M S GLE +E ++ 
Sbjct: 563 FHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIA 622

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++LGA   +     G+++H F +K   +    N +  ++M++Y + G    + ++F+ + 
Sbjct: 623 SILGACSQLSALGLGKEVHCFALKNSLMED--NFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-- 295
             +V SW+  I        G +A  LF+D++ +D Q + +T + +L +     ++  G  
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLN 740

Query: 296 --KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
              Q+Q        +E  +    +I M G+ G++N+A
Sbjct: 741 YLAQMQTLYKLEPELEHYA---CVIDMLGRAGRLNEA 774



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/91 (21%), Positives = 46/91 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   +KN    D  ++ +L+  + K      + R       +++ ++N +I+G     
Sbjct: 639 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 698

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           Q   A++LF+ ++    +PD FTF  +++AC
Sbjct: 699 QGNKAVELFEDMKRSDKQPDRFTFLGVLQAC 729


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/757 (28%), Positives = 398/757 (52%), Gaps = 14/757 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNRDIITYNALISGLARF 59
           +++SL+I  G H   I S  LI+ +  F D   +F  F   + + ++  +N++I  L   
Sbjct: 93  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                AL L+   +   L+PD +TF S++ AC  L + E+   +H   L +GF S +Y+ 
Sbjct: 153 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIG 212

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y +  ++  A   F +    D V++ +++ GY  NG ++++ E++   R+LG+ 
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + +++++VL   G    V+EG+ IHG   K+G    V   +NN ++++Y +    +D  
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI--VNNGLLSMYCKFNGLIDGR 330

Query: 234 KMFDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++FD++   D VSW+  I      G+  E+  LF ++  N F+ +  T+ ++L + G   
Sbjct: 331 RIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLG 389

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK +  +    G+    +  N LI+MY KCG +  ++ +F  +  KDSVSWNSMI 
Sbjct: 390 DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMIN 449

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y +NG F++A+ +F  M++  + P+  T   +L   +    L    ++H  + K GF  
Sbjct: 450 VYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNS 508

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + + L+  Y KC  + +S +V   +  ++ +  N + +  V++      L +   + 
Sbjct: 509 NIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMR 568

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 + +T   +L  C+ +    QGK IH    K   + D+ V + +I+MY KCG++ 
Sbjct: 569 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR 628

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           ++ + F+ +    +  W A++     +G   +    F +M   G+ PD + ++A++ +C 
Sbjct: 629 NSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACS 688

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+GLV E   Y   M   + + P++EHYAC+VDLL R  LL+ A+  I  MP+ PD+ IW
Sbjct: 689 HSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIW 748

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LLSAC + G+ ++      +++EL PD+   YVL+SN+YA+ G W+ V  +RK +K +
Sbjct: 749 GALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKAR 808

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            L K+PG SW+ +    + F  G     Q +E+ K L
Sbjct: 809 GLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLL 845


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 228/675 (33%), Positives = 362/675 (53%), Gaps = 13/675 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C S++E   +  + +K G  +     +  +  ++K G I  A   F    D  +  
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           Y  M+ GY  N   + +      MR   ++   ++ T +L   G + D+K G++IHG  +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFG 262
              F + V       ++N+Y +C Q  DA KMFD + E D+VSW+  IA  + +G     
Sbjct: 175 TNSFAANV--FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232

Query: 263 LFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           L   LR  D   + +  T++ +L +     +L  GK I  +  + GF ++V+I  AL  M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG V  AR IFD +  K  VSWNSM+ GY +NG   +A+ +F  MLE  + P G T+
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
              L A ++   L++   VH  + +     D S+++ LI+ Y KC  ++ +  + + ++ 
Sbjct: 353 MEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 441 KNAVHINALASVLVYASCH--AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           +  V  NA+  +L YA     +EAL  +  +     + +  T   V+ A A ++     K
Sbjct: 413 RTHVSWNAM--ILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH L +++  D++IFV +A++DMY KCG I  A++ F  I    +  WNAM+ GY  HG
Sbjct: 471 WIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHG 530

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
                 +LF+KM K  V+P++ITYL+V+++C H+GLV E   +   M   +GL P ++HY
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHY 590

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
             +VDLLGR G ++ A   I+ MPI P   ++ +   AC I+ NI++G  A  KL EL P
Sbjct: 591 GAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNP 650

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           D    +VLL+N+YAS   W+ V ++RK M++K L K PG S + +    H FY+G ++H 
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHP 710

Query: 739 QSKEIYKELIKL-YE 752
           QSK IY  L +L YE
Sbjct: 711 QSKRIYAFLEELVYE 725



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 271/543 (49%), Gaps = 14/543 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI  L+IKNG + + +  T L+S F+K+     A R      ++    Y+ ++ G A+  
Sbjct: 67  QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL    R+RY  ++P  + F+ L+K CG    L+  + +HG  +   F++ V+ ++
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  YAK  +I  A   F    + D V++  ++ G+  NG   K+ E+ + M+  G   
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L  VL A+ DV     G+ IHG+ ++ GF   V  +++ A+ ++Y +CG    A  
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLV--NISTALADMYSKCGSVETARL 304

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + +  VVSW+  +       E   A  +F+ +          T++  L +      
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK +  F  ++     +S+ N+LISMY KC +V+ A  IF+ L  +  VSWN+MI G
Sbjct: 365 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILG 424

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++NG  ++AL+ F  M    + P+ +TM S++ A++     + A  +H  II+S    +
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKN 484

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC A++ ++++   I  ++ +  NA+            AL+L+  +  
Sbjct: 485 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK 544

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
              E N  T+  V+ AC+    +++G   H  ++K  Y  +  ++   A++D+  + G I
Sbjct: 545 GAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603

Query: 530 EDA 532
           ++A
Sbjct: 604 KEA 606


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/757 (28%), Positives = 398/757 (52%), Gaps = 14/757 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNRDIITYNALISGLARF 59
           +++SL+I  G H   I S  LI+ +  F D   +F  F   + + ++  +N++I  L   
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                AL L+   +   L+PD +TF S++ AC  L + E+   +H   L +GF S +Y+ 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y +  ++  A   F +    D V++ +++ GY  NG ++++ E++   R+LG+ 
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + +++++VL   G    V+EG+ IHG   K+G    V   +NN ++++Y +    +D  
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI--VNNGLLSMYCKFNGLIDGR 271

Query: 234 KMFDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++FD++   D VSW+  I      G+  E+  LF ++  N F+ +  T+ ++L + G   
Sbjct: 272 RIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLG 330

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK +  +    G+    +  N LI+MY KCG +  ++ +F  +  KDSVSWNSMI 
Sbjct: 331 DLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMIN 390

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y +NG F++A+ +F  M++  + P+  T   +L   +    L    ++H  + K GF  
Sbjct: 391 VYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNS 449

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + + L+  Y KC  + +S +V   +  ++ +  N + +  V++      L +   + 
Sbjct: 450 NIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMR 509

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 + +T   +L  C+ +    QGK IH    K   + D+ V + +I+MY KCG++ 
Sbjct: 510 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR 569

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           ++ + F+ +    +  W A++     +G   +    F +M   G+ PD + ++A++ +C 
Sbjct: 570 NSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACS 629

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+GLV E   Y   M   + + P++EHYAC+VDLL R  LL+ A+  I  MP+ PD+ IW
Sbjct: 630 HSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIW 689

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LLSAC + G+ ++      +++EL PD+   YVL+SN+YA+ G W+ V  +RK +K +
Sbjct: 690 GALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKAR 749

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            L K+PG SW+ +    + F  G     Q +E+ K L
Sbjct: 750 GLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL 786


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/766 (29%), Positives = 402/766 (52%), Gaps = 22/766 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
           ++SL+I +G  L  I S  LIS + +  D   +   FR +  T N  +  +N++I  L  
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNN--VYLWNSIIRALTH 98

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYL 115
                 AL  +  +R + L+PDAFTF S++ +C  + + E   IVH   +++GF S +Y+
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y++  ++ +A   F +  + D+V++ +++ GY  NG ++ + +++ + R  G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             + F++++VL   G+   VKEG  +HG   K+G    V   + N ++++Y +  +  +A
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI--IGNGLLSMYFKFERLREA 276

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F ++   D V+W+  I   A       +  LF D+  + F  +  ++ + + + G  
Sbjct: 277 RRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQS 335

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L+ GK +  +    GF       N LI MY KCG +  A+ +FD    KDSV+WNS+I
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLI 395

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY+++G++ + L+ F  M++    P+  T   +L   S    + Q   +H  +IK GF 
Sbjct: 396 NGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFE 454

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +  + + L+  Y KC  +++  +V S +   + +  N + +  V+        ++   +
Sbjct: 455 AELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEM 514

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  + +T   +L  C+ +    QGK IH    K+ ++ ++ + +A+I+MY KCG++
Sbjct: 515 RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSL 574

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E+  + F+ +    +  W A++  +  +G   +    F  M   GV PD + ++A + +C
Sbjct: 575 ENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+G+V+E   +   M   + L P++EHYAC+VDLL R GLL  A+  I  MP+ PDA +
Sbjct: 635 SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASL 694

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LLSAC   GN ++      K+LEL  D+   YVL+SN+YA+ G W+ V  +R  MK 
Sbjct: 695 WGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKT 754

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           K L KEPG SWI +    + F  GD S  Q    Y ++  L E++V
Sbjct: 755 KGLKKEPGSSWIEIQKRVYVFRTGDKSFEQ----YDKVKDLLEYLV 796



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 43/91 (47%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  + K+G   +  +   LI  ++K        +     + +D++T+ ALIS    + 
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   ALK F  +   G+ PD+  F + + AC
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/545 (35%), Positives = 320/545 (58%), Gaps = 5/545 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND 271
           L+N ++ +Y +CG+   A  +FD + + +VVSW+  +       + +E+  LF  +  + 
Sbjct: 9   LSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSG 68

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + N++T    L + G    L  G+QI   C K GF  V  +GN++I MY KCG++N+A 
Sbjct: 69  VKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAA 128

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ +  ++ +SWN+MIAGY+  GF  +AL +F  M E     + +T  S L+A S+  
Sbjct: 129 CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLG 188

Query: 392 SLKQAMQVHSHIIKSGFL--LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           ++K+  Q+H+ +I  GFL  ++ ++   LI  Y KC  L  ++RV S I++K+ +   AL
Sbjct: 189 AIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTAL 248

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
                     AE++EL+R +  S  +V+G   S ++   A    ++QGK +H  A+K   
Sbjct: 249 ILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPS 308

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             DI V ++++DMY KCG I +A+R F ++   ++  W  M+ GY +HG   E   LF++
Sbjct: 309 GVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDE 368

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M     +PD++TYLAVL  C H+GLV + + Y S +   HG+  ++EHYAC+VDLLGR G
Sbjct: 369 MQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAG 428

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L+ AK  +D MP+  +  IWQ+LLSAC ++G+++LG   G  LL L  +N   YV++SN
Sbjct: 429 RLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSN 488

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +YA AG W +  ++R+ +K K L KE G SW+ +    H FY GD +H  +++I++ L +
Sbjct: 489 IYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKE 548

Query: 750 LYEHM 754
           +   M
Sbjct: 549 MERRM 553



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 244/473 (51%), Gaps = 15/473 (3%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G   D +LS  LI  + K      A         R+++++ AL+ G  +      +L LF
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKS 126
            ++   G++P+ FTFS+ +KACG L   +I   +H +C+K GF     + +  I+ Y+K 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 127 GEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
           G I  A  C  + + + N +++ AM+ GY   G  +K+  +F +M+ +G  L+EF+ T+ 
Sbjct: 122 GRINEAA-CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 186 LGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L A  D   +KEG QIH F +  GFL  V   +  A+++LYV+CG+   A ++F  I E 
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            V+SW+  I   A   +  E+  LF+ LR +  Q++ + + +++       +++ GKQ+ 
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           AF  KV     +S+ N+++ MY KCG +N+A  +F  +  ++ +SW  MI GY ++G   
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCL 418
           +A+ +F  M   S  P+  T  ++L   S+S  +++  +  S +    G        +C+
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           +   G+   L E+K ++  +  +  V I    ++L     H + LEL + + G
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGI--WQTLLSACRVHGD-LELGKEVGG 470



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 239/470 (50%), Gaps = 28/470 (5%)

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
           +GF   + L +  I  Y K G +  A   F   L  + V++TA++CG++ NG   +S  +
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 167 FVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           F +M   G++ N+F+ +  L A       D+  G QIH   VK GF   + N + N+I++
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDI--GRQIHDICVKTGF--DMVNVVGNSIID 116

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA-----CDGVEAFGLFKDLRFNDFQINE 276
           +Y +CG+  +A  MF+ +   +++SW+  IA       C+  +A  LF+ ++     ++E
Sbjct: 117 MYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCE--KALVLFQKMQEVGGFLDE 174

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV--SIGNALISMYGKCGQVNDARSIF 334
           +T  + L +      ++ G QI AF    GF+  V  ++  ALI +Y KCG++  AR +F
Sbjct: 175 FTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVF 234

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
            ++  K  +SW ++I GY++ G   +++++F  + E S+  +G+ ++S++   ++   ++
Sbjct: 235 SHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQ 294

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           Q  Q+H+  IK    +D S+ + ++  Y KC  +NE++R+ SE+  +N +    + +   
Sbjct: 295 QGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYG 354

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-----ALKARY 509
                 EA+ L+  +     E +  T+  VL  C+    +E+G+           +KAR 
Sbjct: 355 KHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARV 414

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           +      + ++D+  + G +++AK     +  ++  G W  ++     HG
Sbjct: 415 EH----YACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 190/385 (49%), Gaps = 21/385 (5%)

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +GF   + + N LI MYGKCG++  A  +FD ++ ++ VSW +++ G+ +NG   ++L +
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  M    + PN +T ++ L+A      L    Q+H   +K+GF + + + + +I  Y K
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG----ST 480
           C  +NE+  +   +  +N +  NA+ +    A    +AL L++ +    +EV G     T
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKM----QEVGGFLDEFT 176

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKAR--YDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           F+  LKAC+ +  +++G  IH   +     Y  +  V  A+ID+Y KCG +  A+R F  
Sbjct: 177 FTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSH 236

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           I    +  W A+++GYAQ G   E   LF ++ +  ++ D     +++       LV++ 
Sbjct: 237 IEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG 296

Query: 599 RTYLSCMSDLHGLIPQ-LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           +     M      +P  ++   C  I+D+  + G++  A+    +MP   +   W  +++
Sbjct: 297 KQ----MHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMP-ARNVISWTVMIT 351

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDN 680
               YG   LG  A     E+Q D+
Sbjct: 352 G---YGKHGLGKEAIRLFDEMQLDS 373



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/137 (19%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  IK    +D  +  +++  + K      A R   +   R++I++  +I+G  +  
Sbjct: 298 QMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHG 357

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQE-NEIVHGVCLKLGFSSRVYLV 116
               A++LFD ++     PD  T+ +++  C   G +++  E    +C   G  +RV   
Sbjct: 358 LGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHY 417

Query: 117 SGFIENYAKSGEIVSAE 133
           +  ++   ++G +  A+
Sbjct: 418 ACMVDLLGRAGRLKEAK 434


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/766 (29%), Positives = 402/766 (52%), Gaps = 22/766 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
           ++SL+I +G  L  I S  LIS + +  D   +   FR +  T N  +  +N++I  L  
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNN--VYLWNSIIRALTH 98

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYL 115
                 AL  +  +R + L+PDAFTF S++ +C  + + E   IVH   +++GF S +Y+
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y++  ++ +A   F +  + D+V++ +++ GY  NG ++ + +++ + R  G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             + F++++VL   G+   VKEG  +HG   K+G    V   + N ++++Y +  +  +A
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI--IGNGLLSMYFKFERLREA 276

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F ++   D V+W+  I   A       +  LF D+  + F  +  ++ + + + G  
Sbjct: 277 RRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQS 335

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L+ GK +  +    GF       N LI MY KCG +  A+ +FD    KDSV+WNS+I
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLI 395

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY+++G++ + L+ F  M++    P+  T   +L   S    + Q   +H  +IK GF 
Sbjct: 396 NGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFE 454

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +  + + L+  Y KC  +++  +V S +   + +  N + +  V+        ++   +
Sbjct: 455 AELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEM 514

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  + +T   +L  C+ +    QGK IH    K+ ++ ++ + +A+I+MY KCG++
Sbjct: 515 RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSL 574

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E+  + F+ +    +  W A++  +  +G   +    F  M   GV PD + ++A + +C
Sbjct: 575 ENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+G+V+E   +   M   + L P++EHYAC+VDLL R GLL  A+  I  MP+ PDA +
Sbjct: 635 SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASL 694

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LLSAC   GN ++      K+LEL  D+   YVL+SN+YA+ G W+ V  +R  MK 
Sbjct: 695 WGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKT 754

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           K L KEPG SWI +    + F  GD S  Q    Y ++  L E++V
Sbjct: 755 KGLKKEPGSSWIEIQKRVYVFRTGDKSFEQ----YDKVKDLLEYLV 796



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 43/91 (47%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  + K+G   +  +   LI  ++K        +     + +D++T+ ALIS    + 
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   ALK F  +   G+ PD+  F + + AC
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/701 (31%), Positives = 369/701 (52%), Gaps = 11/701 (1%)

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYL 115
           F +   A  +  RL   G   D+ T+  L + C  L++  +   V    ++ G    +Y 
Sbjct: 35  FTRRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYE 94

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           ++  I+ Y+  G +  A   F    +   V + A++ GY   G   ++  +F +M   GL
Sbjct: 95  LNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGL 154

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E +  +  +VL A      +  G+++H   V  GF+S     +  A++++YV+ G   DA
Sbjct: 155 EPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDF--RIGTALVSMYVKGGSMDDA 212

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD +   DV +++  +   A + D  +AF LF  ++    + N+ + +++L      
Sbjct: 213 RQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTP 272

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK + A C   G ++ + +  +LI MY  CG +  AR +FD +  +D VSW  MI
Sbjct: 273 EALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMI 332

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY+ENG    A  +F  M E  + P+  T   I+ A + S +L  A ++HS +  +GF 
Sbjct: 333 EGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFG 392

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + L+  Y KC A+ ++++V   + +++ V  +A+    V      EA E +  +
Sbjct: 393 TDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLM 452

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             S  E +G T+  +L AC  +  L+ G  I+  A+KA     + + +A+I M  K G++
Sbjct: 453 KRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSV 512

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E A+  F  + R  +  WNAM+ GY+ HG   E   LF++M K   +P+ +T++ VL++C
Sbjct: 513 ERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSAC 572

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             AG V E R + + + +  G++P ++ Y C+VDLLGR G L+ A++ I  MP+ P + I
Sbjct: 573 SRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSI 632

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W SLL AC I+GN+D+   A  + L + P + + YV LS++YA+AGMW +V K+RK M+ 
Sbjct: 633 WSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMES 692

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + + KE G +WI V G  H F   D SH    EIY EL +L
Sbjct: 693 RGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARL 733



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/570 (24%), Positives = 279/570 (48%), Gaps = 15/570 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+   +I+ G  L+     TLI  ++   +   A +     +N+ ++T+NALI+G A+  
Sbjct: 78  QVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVG 137

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A  LF ++  +GL P   TF S++ AC S   L   + VH   +  GF S   + +
Sbjct: 138 HVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGT 197

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             +  Y K G +  A   F D L + +V+ +  MV GY  +G+++K+ E+F  M+ +GL+
Sbjct: 198 ALVSMYVKGGSMDDARQVF-DGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLK 256

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N+ S  ++L   +  +    G+ +H   +  G +  +   +  +++ +Y  CG    A 
Sbjct: 257 PNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI--RVATSLIRMYTTCGSIEGAR 314

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++FD +   DVVSW+  I    +     +AFGLF  ++    Q +  T ++++++     
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L   ++I +     GF   + +  AL+ MY KCG + DAR +FD +  +D VSW++MI 
Sbjct: 375 NLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIG 434

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y ENG+  +A + F  M   ++ P+G T  ++L A  +  +L   M++++  IK+  + 
Sbjct: 435 AYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVS 494

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
              + + LI    K  ++  ++ +   + +++ +  NA+           EAL L+  + 
Sbjct: 495 HVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRML 554

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR-YDQDIFVESAVIDMYCKCGTI 529
                 N  TF  VL AC+    +++G+      L+ R     + +   ++D+  + G +
Sbjct: 555 KERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGEL 614

Query: 530 EDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           ++A+   + +  + + + W+++++    HG
Sbjct: 615 DEAELLIKSMPVKPTSSIWSSLLVACRIHG 644


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/769 (31%), Positives = 396/769 (51%), Gaps = 43/769 (5%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
            ++   IK G   D  +S  L++ ++K    R A R LFD  + RD++ +N ++ G  +  
Sbjct: 749  VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDA-RLLFDWMRERDVVLWNMMLKGYVQLG 807

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
                A +LF      GLRPD F+   ++     +  +E   G  L               
Sbjct: 808  LEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE---GKWL--------------- 849

Query: 121  ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               A   +  +A++   D  + D   +   +   +W G+   + E FV M  L ++ +  
Sbjct: 850  ---ADQVQAYAAKLSLSDD-NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAV 905

Query: 181  SLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
            +L  VL A   + D++ G+Q+HG  VK G  S V   + N+++N+Y + G    A ++F+
Sbjct: 906  TLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVS--VANSLVNMYSKMGCAYFAREVFN 963

Query: 238  EITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLL----SSVGGER 290
            ++   D++SW+  I++        E+  LF DL     + + +T+ ++L    S + G  
Sbjct: 964  DMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLN 1023

Query: 291  ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            I R   QI     K G +    +   LI +Y K G++ +A  +F      D   WN+M+ 
Sbjct: 1024 ISR---QIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMF 1080

Query: 351  GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            GY       +AL++F  + +     +  T+A+  +A      L Q  Q+H+H IK+GF  
Sbjct: 1081 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS 1140

Query: 411  DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
            D  + S ++  Y KC  +  +  V + I   + V   ++ S  V      +AL +Y  + 
Sbjct: 1141 DLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMR 1200

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
             S    +  TF+ ++KA + +T LEQG+ +H   +K     D FV ++++DMY KCG IE
Sbjct: 1201 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIE 1260

Query: 531  DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            DA R F+K+   ++A WNAM++G AQHG   E  NLF  M   G++PD ++++ +L++C 
Sbjct: 1261 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 1320

Query: 591  HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
            HAGL  EA  YL  M + +G+ P++EHY+C+VD LGR GL++ A   I+ MP    A I 
Sbjct: 1321 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 1380

Query: 651  QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            ++LL AC I G+++ G    ++L  L+P + + YVLLSN+YA+A  W+DV   RK MK K
Sbjct: 1381 RALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRK 1440

Query: 711  FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
             + K+PG+SWI V    H F   D SH Q+  IY ++    E M+ T +
Sbjct: 1441 NVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKV----EEMMKTIR 1485



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 187/717 (26%), Positives = 328/717 (45%), Gaps = 74/717 (10%)

Query: 3    YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
            ++ ++ +G   D  LS  L++ ++K      A +    T  RD++T+NA++   A    S
Sbjct: 644  HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 703

Query: 63   G-----PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
                    L LF  LR         T + ++K C   G L   E VHG  +K+G    V+
Sbjct: 704  NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 763

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +    +  Y+K G +  A + F    + D V +  M+ GYV  G   ++ ++F E    G
Sbjct: 764  VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 823

Query: 175  LELNEFSLTAVLGASFDVK--EG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            L  +EFS+  +L    +V   EG    +Q+  +  K+                       
Sbjct: 824  LRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSD------------------- 864

Query: 229  KLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
                         PDV  W+++++    A D   A   F ++   +   +  T++ +L++
Sbjct: 865  -----------DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAA 913

Query: 286  VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
            V G   L  GKQ+     K G    VS+ N+L++MY K G    AR +F+ +   D +SW
Sbjct: 914  VAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISW 973

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVHSHII 404
            NSMI+  +++    +++++F  +L   L P+ +T+AS+L A S+    L  + Q+H H +
Sbjct: 974  NSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHAL 1033

Query: 405  KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
            K+G + D  + + LI  Y K   + E++ +    D  +    NA+    +  +   +ALE
Sbjct: 1034 KTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALE 1093

Query: 465  LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
            L+  I  S  + +  T +   KAC  +  L+QGK IH  A+KA +D D+ V S ++DMY 
Sbjct: 1094 LFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYI 1153

Query: 525  KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            KCG + +A   F  I       W +M+ G   +G   +   ++++M +  V PDE T+  
Sbjct: 1154 KCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFAT 1213

Query: 585  VL--TSCC---------HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            ++  +SC          HA +++     L C+SD     P +     +VD+  + G +E 
Sbjct: 1214 LIKASSCVTALEQGRQLHANVIK-----LDCVSD-----PFVG--TSLVDMYAKCGNIED 1261

Query: 634  AKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLS 688
            A     +M +   A +W ++L     +GN +  + L    K   ++PD  S   +LS
Sbjct: 1262 AYRLFKKMNVRNIA-LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 1317



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 242/458 (52%), Gaps = 13/458 (2%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            Q++ + +K+G   D  ++ +L++ ++K      A     D ++ D+I++N++IS  A+  
Sbjct: 925  QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE----NEIVHGVCLKLGFSSRVYLV 116
                ++ LF  L ++GL+PD FT +S+++AC SL +    +  +H   LK G  +  ++ 
Sbjct: 985  LEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVA 1044

Query: 117  SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            +  I+ Y+KSG++  AE  F++  DLD   + AM+ GY+   +  K+ E+F  +   G +
Sbjct: 1045 TTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEK 1104

Query: 177  LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             ++ +L       G    + +G+QIH   +K GF S +  H+N+ I+++Y++CG  ++A 
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL--HVNSGILDMYIKCGDMVNAG 1162

Query: 234  KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             +F+ I+ PD V+W+  I+   D     +A  ++  +R +    +EYT   L+ +     
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222

Query: 291  ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             L  G+Q+ A   K+  +    +G +L+ MY KCG + DA  +F  +  ++   WN+M+ 
Sbjct: 1223 ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLV 1282

Query: 351  GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFL 409
            G +++G   +A+++F  M    + P+  +   IL A S++    +A + +HS     G  
Sbjct: 1283 GLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 1342

Query: 410  LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
             +    SCL+   G+   + E+ +V+  +  K +  IN
Sbjct: 1343 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 1380



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL-----ASVL 453
            H+ I+ SG   D  + + L+T Y KC +L+ +++V     +++ V  NA+     ASV 
Sbjct: 643 THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 702

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  E L L+R +  S       T + VLK C     L   + +H  A+K   + D+
Sbjct: 703 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 762

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           FV  A++++Y KCG + DA+  F  +    +  WN M+ GY Q G   E   LF++  + 
Sbjct: 763 FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRS 822

Query: 574 GVKPDEITYLAVLT 587
           G++PDE +   +L 
Sbjct: 823 GLRPDEFSVQLILN 836



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 12/189 (6%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L+   +  +L  GK  H   + +    D F+ + ++ MY KCG++  A++ F       
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 544 LAGWNAMMMGYA-----QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           L  WNA++  YA       G   E  +LF  +         +T   VL  C ++G +  A
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
                    + GL   +     +V++  + G +  A++  D M    D  +W  +L    
Sbjct: 747 EGVHGYAIKI-GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLK--- 801

Query: 659 IYGNIDLGL 667
             G + LGL
Sbjct: 802 --GYVQLGL 808


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 238/753 (31%), Positives = 382/753 (50%), Gaps = 11/753 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I  G      LS+ ++  +             F  +  + + +N +I GL    
Sbjct: 65  QVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLG 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
               AL  + ++    + PD +TF  ++KACG L       +VH     LGF   +++ S
Sbjct: 125 WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGS 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YA +G I  A   F +    D + +  M+ GYV +G+F+ +   F  MR+    +
Sbjct: 185 ALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV 244

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  + T +L       +   G Q+HG  +  GF       + N ++ +Y +CG   DA K
Sbjct: 245 NSVTYTCILSICATRGKFCLGTQVHGLVIGSGF--EFDPQVANTLVAMYSKCGNLFDARK 302

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + + D V+W+  IA         EA  LF  +     + +  T  + L S+     
Sbjct: 303 LFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 362

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR  K++ ++  +      V + +ALI +Y K G V  AR IF      D     +MI+G
Sbjct: 363 LRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISG 422

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    A++ F  +++  ++PN  TMAS+L A +   +LK   ++H  I+K      
Sbjct: 423 YVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENI 482

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            ++ S +   Y KC  L+ +      + + +++  N++ S          A++L+R +  
Sbjct: 483 VNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGM 542

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  + S  L + A +  L  GK +H   ++  +  D FV SA+IDMY KCG +  
Sbjct: 543 SGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLAL 602

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F  +   +   WN+++  Y  HGC  E  +LF++M + GV PD +T+L ++++C H
Sbjct: 603 ARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGH 662

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV E   Y  CM+  +G+  ++EHYAC+VDL GR G L  A   I  MP  PDA +W 
Sbjct: 663 AGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWG 722

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC ++GN++L  LA   LLEL P N   YVLLSN++A AG W  V K+R+ MKEK 
Sbjct: 723 TLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKG 782

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + K PGYSWI V G TH F A + +H +S EIY
Sbjct: 783 VQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIY 815



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 188/385 (48%), Gaps = 3/385 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +L  +     +++  +Q+       G  +V ++ + ++ +Y  CG+++D  ++F  L   
Sbjct: 49  SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           +++ WN MI G    G+F+ AL  +  ML  ++ P+ YT   +++A     ++   M VH
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +     GF +D  + S LI  Y     + +++RV  E+ +++ +  N +    V +    
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            A+  +  +  S   VN  T++ +L  CA       G  +H L + + ++ D  V + ++
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY KCG + DA++ F  + +     WN ++ GY Q+G   E + LFN M   GVKPD +
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 348

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+ + L S   +G +R  +   S +   H +   +   + ++D+  + G +E A+    Q
Sbjct: 349 TFASFLPSILESGSLRHCKEVHSYIVR-HRVPFDVYLKSALIDIYFKGGDVEMARKIFQQ 407

Query: 641 MPIPPDAHIWQSLLSACTIYG-NID 664
             +  D  +  +++S   ++G NID
Sbjct: 408 NTL-VDVAVCTAMISGYVLHGLNID 431



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 18/293 (6%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           + S+  A S++  ++QA QVH+ II  G     ++ S ++  Y  C  +++   +   ++
Sbjct: 47  LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
             NA+  N +   L        AL  Y  + GS    +  TF  V+KAC  + ++     
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 166

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H  A    +  D+FV SA+I +Y   G I DA+R F ++ +     WN M+ GY + G 
Sbjct: 167 VHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGD 226

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI------- 612
           ++     F  M       + +TY  +L+ C         R      + +HGL+       
Sbjct: 227 FNNAMGTFCGMRTSYSMVNSVTYTCILSIC-------ATRGKFCLGTQVHGLVIGSGFEF 279

Query: 613 -PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
            PQ+ +   +V +  + G L  A+   + MP   D   W  L++     G  D
Sbjct: 280 DPQVAN--TLVAMYSKCGNLFDARKLFNTMP-QTDTVTWNGLIAGYVQNGFTD 329


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/726 (32%), Positives = 381/726 (52%), Gaps = 20/726 (2%)

Query: 41  TQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACG---SL 94
           T N   +  NA I    +FC+ G    A+KL  R +   L  +  T+ S+++ C    SL
Sbjct: 19  THNNVTVDKNAKI---CKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSL 73

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           ++ + VH +    G +    L +  +  Y   G++V     F   L+     +  ++  Y
Sbjct: 74  EDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEY 133

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGV 211
              G + +S  +F +M+ LG+  + ++ T VL    AS  V+E +++HG+ +K+GF  G 
Sbjct: 134 AKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGF--GS 191

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLR 268
            N + N+++  Y +CG+   A  +FDE+++ DVVSW+  I+    +G    GL  F  + 
Sbjct: 192 YNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQML 251

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
                ++  T++N+L +      L  G+ + A+  K GF   V   N L+ MY KCG +N
Sbjct: 252 NLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLN 311

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            A  +F  +     VSW S+IA +   G   +A+ +F  M    L P+ Y + S++ A +
Sbjct: 312 GANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACA 371

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
            S SL +  +VH+HI K+    +  + + L+  Y KC ++ E+  + S++  KN V  N 
Sbjct: 372 CSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNT 431

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +       S   EAL+L+  +    +  +  T + VL ACA +  LE+G+ IH   L+  
Sbjct: 432 MIGGYSQNSLPNEALQLFLDMQKQLKP-DDVTMACVLPACAGLAALEKGREIHGHILRKG 490

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           Y  D+ V  A++DMY KCG +  A++ F  I +  +  W  M+ GY  HG   E  + F 
Sbjct: 491 YFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFE 550

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           KM   G++P+E ++ ++L +C H+GL++E       M     + P+LEHYAC+VDLL R 
Sbjct: 551 KMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRS 610

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  A   I+ MPI PDA IW +LLS C I+ +++L       + EL+P+N   YVLL+
Sbjct: 611 GNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLA 670

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YA A  W +V K+++ + +  L  + G SWI V G  + F+AGD+SH Q+K I   L 
Sbjct: 671 NVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLR 730

Query: 749 KLYEHM 754
           KL   M
Sbjct: 731 KLTMKM 736



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 308/601 (51%), Gaps = 20/601 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S++  NG  +D +L   L+  +    D  +  R      N  I  +N L+S  A+  
Sbjct: 78  RVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIG 137

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               ++ LF++++  G+R D++TF+ ++K   A   ++E + VHG  LKLGF S   +V+
Sbjct: 138 NYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVN 197

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K GE+ SA + F +  D D V++ +M+ G   NG      E F++M +LG+++
Sbjct: 198 SLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDV 257

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L  VL A  +V     G  +H +GVK GF  GV    NN ++++Y +CG    A +
Sbjct: 258 DSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGV--MFNNTLLDMYSKCGNLNGANE 315

Query: 235 MFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++ E  +VSW+  IAA   +G+  EA GLF +++    + + Y + +++ +      
Sbjct: 316 VFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNS 375

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+++     K      + + NAL++MY KCG + +A  IF  L  K+ VSWN+MI G
Sbjct: 376 LDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGG 435

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS+N   N+AL +F  M +  L P+  TMA +L A +   +L++  ++H HI++ G+  D
Sbjct: 436 YSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSD 494

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +   L+  Y KC  L  ++++   I KK+ +    + +         EA+  +  +  
Sbjct: 495 LHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRV 554

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           +  E   S+F+ +L AC     L++G K    +  +   +  +   + ++D+  + G + 
Sbjct: 555 AGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLS 614

Query: 531 DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLAVLT 587
            A +    +  +   A W A++ G   H   H+V  L  K+++  F ++P+   Y  +L 
Sbjct: 615 RAYKFIETMPIKPDAAIWGALLSGCRIH---HDVE-LAEKVAEHIFELEPENTRYYVLLA 670

Query: 588 S 588
           +
Sbjct: 671 N 671


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 230/772 (29%), Positives = 396/772 (51%), Gaps = 35/772 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +    +I+ + K  +  +A  F      RD++++N+++SG  +  ++  ++++F  + 
Sbjct: 71  DVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMG 130

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G   D  TF+ ++K C  L++  +   +HGV +++G  + V   S  ++ YAK    V
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---G 187
            +   F+   + ++V+++A++ G V N     + + F EM+ +   +++    +VL    
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250

Query: 188 ASFDVKEGEQIHGFGVKVGFLS-GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           A  +++ G Q+H   +K  F + G+   +  A +++Y +C    DA  +FD+    +  S
Sbjct: 251 ALSELRLGGQLHAHALKSDFAADGI---VRTATLDMYAKCDNMQDAQILFDKSENLNRQS 307

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           ++  I        G +A  LF  L  +    +E ++  +  +    + L  G QI     
Sbjct: 308 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAI 367

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K      V + NA I MYGKC  + +A  +FD +  +D+VSWN++IA + +NG   + L 
Sbjct: 368 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 427

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  ML   + P+ +T  S+L+A +   SL   M++HS I+KSG   + S+   LI  Y 
Sbjct: 428 LFVSMLRSRIEPDEFTFGSVLKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 424 KCNALNESKRV-------------LSEIDKKN-------AVHINALASVLVYASCHAEAL 463
           KC  + E++++             + E++K +        V  N++ S  V      +A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +       +  T++ VL  CA +     GK IH   +K     D+++ S ++DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMY 606

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG + D++  F K  R     WNAM+ GYA HG   E   LF +M    +KP+ +T++
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L +C H GL+ +   Y   M   +GL PQL HY+ +VD+LG+ G ++ A   I +MP 
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726

Query: 644 PPDAHIWQSLLSACTIY-GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             D  IW++LL  CTI+  N+++   A + LL L P + S Y LLSN+YA AGMW  V  
Sbjct: 727 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 786

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           LR+ M+   L KEPG SW+ +    H F  GD +H + +EIY+EL  +Y  M
Sbjct: 787 LRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 838



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 268/568 (47%), Gaps = 67/568 (11%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-----RDCLDL---- 142
           G+L+  +  H   +  GF    ++++  ++ Y  S + VSA M F     RD +      
Sbjct: 20  GALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMI 79

Query: 143 ----------------------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
                                 D V++ +M+ GY+ NGE  KS EVFV+M   G E +  
Sbjct: 80  NGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGR 139

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +   +L       D   G QIHG  V+VG  + V     +A++++Y +  + ++++++F 
Sbjct: 140 TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVV--AASALLDMYAKGKRFVESLRVFQ 197

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            I E + VSWS  IA          A   FK+++  +  +++    ++L S      LR 
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS- 353
           G Q+ A   K  F     +  A + MY KC  + DA+ +FD     +  S+N+MI GYS 
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQ 317

Query: 354 -ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            E+GF  +AL +F  ++   L  +  +++ +  A +  K L + +Q++   IKS   LD 
Sbjct: 318 EEHGF--KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + +  I  YGKC AL E+ RV  E+ +++AV  NA+ +         E L L+ ++  S
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             E +  TF  VLKAC   + L  G  IH   +K+    +  V  ++IDMY KCG IE+A
Sbjct: 436 RIEPDEFTFGSVLKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494

Query: 533 KRAF-RKICRDSLAG-------------------WNAMMMGYAQHGCYHEVSNLFNKMSK 572
           ++   R   R +++G                   WN+++ GY       +   LF +M +
Sbjct: 495 EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554

Query: 573 FGVKPDEITYLAVLTSCCH---AGLVRE 597
            G+ PD+ TY  VL +C +   AGL ++
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQ 582



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 268/569 (47%), Gaps = 33/569 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ ++++ G   D + ++ L+  + K   F  + R       ++ ++++A+I+G  +  
Sbjct: 159 QIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 218

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ALK F  ++          ++S++++C +L E  +   +H   LK  F++   + +
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 278

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +  A++ F    +L+  +Y AM+ GY       K+  +F  + S GL  
Sbjct: 279 ATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 338

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+ V  A   VK   EG QI+   +K      VC  + NA +++Y +C    +A +
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVC--VANAAIDMYGKCQALAEAFR 396

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE+   D VSW+  IAA      G E   LF  +  +  + +E+T  ++L +  G   
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGS- 455

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--------- 342
           L  G +I +   K G     S+G +LI MY KCG + +A  I      + +         
Sbjct: 456 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELE 515

Query: 343 -----------VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
                      VSWNS+I+GY        A  +F  M+E  + P+ +T A++L+  +N  
Sbjct: 516 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 575

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           S     Q+H+ +IK     D  + S L+  Y KC  L++S+ +  +  +++ V  NA+  
Sbjct: 576 SAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 635

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYD 510
              +     EA++L+  +     + N  TF  +L+ACA M  +++G +  + +      D
Sbjct: 636 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 695

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             +   S ++D+  K G ++ A    R++
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREM 724



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 43/401 (10%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ  A     GF     + N L+ +Y        A  +FD +  +D VSWN MI G
Sbjct: 22  LELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMING 81

Query: 352 YSENG-------FFN------------------------QALDMFCHMLEFSLIPNGYTM 380
           Y+++        FFN                        +++++F  M       +G T 
Sbjct: 82  YAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTF 141

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A IL+  S  +     MQ+H  +++ G   D    S L+  Y K     ES RV   I +
Sbjct: 142 AIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           KN+V  +A+ +  V  +  + AL+ ++ +      V+ S ++ VL++CAA+++L  G  +
Sbjct: 202 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 261

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H  ALK+ +  D  V +A +DMY KC  ++DA+  F K    +   +NAM+ GY+Q    
Sbjct: 262 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHG 321

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA-GLVREARTYLSCMSDLHGLIPQLEHYA 619
            +   LF+++   G+  DEI+   V  +C    GL    + Y     DL  +   L    
Sbjct: 322 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-----DL-AIKSSLSLDV 375

Query: 620 CI----VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           C+    +D+ G+   L  A    D+M    DA  W ++++A
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 172/380 (45%), Gaps = 32/380 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QIY L IK+   LD  ++   I  + K      AFR   + + RD +++NA+I+   +  
Sbjct: 361 QIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           +    L LF  +    + PD FTF S++KAC  GSL     +H   +K G +S   +   
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 480

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN--------------------VAYTAMVCGYVWNG 158
            I+ Y+K G I  AE          N                    V++ +++ GYV   
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 540

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
           + + ++ +F  M  +G+  ++F+   VL    ++     G+QIH   +K    S V  ++
Sbjct: 541 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV--YI 598

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDF 272
           ++ ++++Y +CG   D+  MF++    D V+W+  I   A    G EA  LF+ +   + 
Sbjct: 599 SSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 658

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDAR 331
           + N  T I++L +     ++  G +      +  G    +   + ++ + GK G+V  A 
Sbjct: 659 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718

Query: 332 SIFDYLIFK-DSVSWNSMIA 350
            +   + F+ D V W +++ 
Sbjct: 719 ELIREMPFEADDVIWRTLLG 738



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 81/212 (38%), Gaps = 35/212 (16%)

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA    LE GK  H   + + +    FV + ++ +Y        A   F ++    +  W
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 548 NAMMMGYAQHGCYHEVSNLFNKM------------SKFGVKPDEITYLAVLTSCCHAGLV 595
           N M+ GYA+     + S  FN M            S +    + +  + V      AG  
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 596 REARTYL------SCMSD------LHGLIPQLEHYACIVDLLGRVGLLE---GAKMTIDQ 640
            + RT+       SC+ D      +HG++ ++    C  D++    LL+     K  ++ 
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRV---GCDTDVVAASALLDMYAKGKRFVES 192

Query: 641 MP----IPPDAHI-WQSLLSACTIYGNIDLGL 667
           +     IP    + W ++++ C     + L L
Sbjct: 193 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 224


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/791 (29%), Positives = 402/791 (50%), Gaps = 43/791 (5%)

Query: 3   YSLLIKNGHHLDPILS-TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           Y+  + +G  L  ++S   +I  +    D  RA         RD++++N+++SG  +  +
Sbjct: 102 YATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGE 161

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
           +  ++K+F  +   G+  D  +FS ++K C  L+  ++   +HG+ L++G+ + V   S 
Sbjct: 162 NLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSA 221

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK   +  +   F      + ++++A++ G V N   D   ++F EM+ +G+ ++
Sbjct: 222 LLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVS 281

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLS-GVCNHLNNAIMNLYVRCGQKLDAVK 234
           +    +VL +     D++ G Q+H   +K  F+  G+   +  A +++Y +C    DA +
Sbjct: 282 QSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGI---VRTATLDMYAKCNNMQDAQR 338

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD     ++ S++  I       +G  A  LF+ L  +    +E ++   L +    + 
Sbjct: 339 LFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKG 398

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G Q+     K  F   + + NA I MYGKC  +++A  +FD +  KD+VSWN++IA 
Sbjct: 399 LSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAA 458

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           + +N   ++ L++   ML   + P+ YT  S+L+A +   SL   M++H+ I+K G   +
Sbjct: 459 HEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGD-SLNHGMEIHTTIVKLGMASN 517

Query: 412 DSMISCLITTYGKCNALNESKRVLSEI------------------------DKKNA---V 444
             + S L+  Y KC  ++E++++ ++I                        D++     V
Sbjct: 518 PYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIV 577

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             NA+ S  V      +A   +  +       +  T+S VL  CA +  +  GK IH   
Sbjct: 578 SWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHV 637

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K     D+++ S ++DMY KCG + D++  F K        WNAM+ GYA HG   E  
Sbjct: 638 IKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAI 697

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF  M    + P+  T++++L +C H GLV     Y   M   +GL P+LEHY+ +VD+
Sbjct: 698 KLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDI 757

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI-YGNIDLGLLAGSKLLELQPDNEST 683
           LG+ G +E A   I +MP   D  IW++LLSAC I   N++   +A + LL L P + ST
Sbjct: 758 LGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSST 817

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           Y+LLSN+YA AGMW+   +LR  M+   L KEPG SW+ +    H F  GD +H + KEI
Sbjct: 818 YILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEI 877

Query: 744 YKELIKLYEHM 754
           Y  L  +Y  M
Sbjct: 878 YNGLALIYNEM 888



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 178/691 (25%), Positives = 315/691 (45%), Gaps = 91/691 (13%)

Query: 83  TFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
            FS + K C   + +E+    H   +  GF   V++ +  ++ Y   G +  A   F   
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110

Query: 140 LDLDNVAYTAMVCGYV----------------------WN---------GEFDKSKEVFV 168
              D V++ AM+ GY                       WN         GE  +S +VF+
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170

Query: 169 EMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           EM   G+E +  S + +L       + K G QIHG  +++G+ + V +   +A++++Y +
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVS--GSALLDMYAK 228

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAAC-----DGVEAFGLFKDLRFNDFQINEYTMI 280
           C +  ++  +F  + + + +SWS  IA        DG     +FK+++     +++    
Sbjct: 229 CKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDG--GLKMFKEMQKVGVGVSQSIYA 286

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++L S      LR G Q+ A   K  F++   +  A + MY KC  + DA+ +FD     
Sbjct: 287 SVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENL 346

Query: 341 DSVSWNSMIAGYSE--NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           +  S+N+MI GYS+  NGF  +AL +F  + + SL  +  +++  L A +  K L + +Q
Sbjct: 347 NLQSYNAMITGYSQKDNGF--RALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQ 404

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H    KS F  +  + +  I  YGKC AL+E+ RV  E+ +K+AV  NA+ +       
Sbjct: 405 LHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEE 464

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
            ++ L +  ++  S  E +  TF  VLKACA    L  G  IH   +K     + ++ S+
Sbjct: 465 RSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSS 523

Query: 519 VIDMYCKCGTIEDAKRAFRKI---------------------------CRDSLAGWNAMM 551
           ++DMY KCG I++A++   KI                            ++ +  WNA++
Sbjct: 524 LVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAII 583

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GY       +    FN+M + G+ PD+ TY  VL +C +      A   L      H +
Sbjct: 584 SGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANL-----ASIGLGKQIHAHVI 638

Query: 612 IPQLEH--YAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--L 665
             +L++  Y C  +VD+  + G L  +++  ++ PI  D   W +++     +G  +  +
Sbjct: 639 KKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPI-RDFVTWNAMICGYAHHGMGEEAI 697

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            L     L+ + P N +T+V L    A  G+
Sbjct: 698 KLFESMVLMNIMP-NHATFVSLLRACAHMGL 727



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 144/570 (25%), Positives = 269/570 (47%), Gaps = 42/570 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ + ++ G+  D +  + L+  + K      +F   +    ++ I+++A+I+G  +  
Sbjct: 202 QIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNN 261

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                LK+F  ++  G+      ++S++K+C +L +  +   +H   LK  F     + +
Sbjct: 262 FLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRT 321

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK   +  A+  F    +L+  +Y AM+ GY       ++  +F ++    L  
Sbjct: 322 ATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGF 381

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E SL+  L A   VK   EG Q+HG   K  F   +C  + NA +++Y +C    +A +
Sbjct: 382 DEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNIC--VANAFIDMYGKCEALDEACR 439

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE+   D VSW+  IAA     E      +   +  +  + +EYT  ++L +  G+  
Sbjct: 440 VFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDS- 498

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD--YLIFKDS------- 342
           L  G +I     K+G      IG++L+ MY KCG +++A  I +  ++   DS       
Sbjct: 499 LNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHP 558

Query: 343 ------------------VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
                             VSWN++I+GY        A   F  M+E  + P+ +T +++L
Sbjct: 559 ETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVL 618

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +  +N  S+    Q+H+H+IK     D  + S L+  Y KC  L++S+ +  +   ++ V
Sbjct: 619 DTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFV 678

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             NA+     +     EA++L+ ++       N +TF  +L+ACA M  +E+G     + 
Sbjct: 679 TWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHM- 737

Query: 505 LKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           +K  Y  D  +E  S ++D+  K G +E A
Sbjct: 738 MKKEYGLDPRLEHYSNMVDILGKSGEVEKA 767



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 236/501 (47%), Gaps = 47/501 (9%)

Query: 178 NEFSLTAVLGASFDVKE---------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           +E   T+V   SF  KE         G+Q H   +  GF   V   ++N ++ LY+ CG 
Sbjct: 42  HEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTV--FVSNCLLQLYINCGN 99

Query: 229 KLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND-----------FQI 274
              A K+FD +   DVVSW+  I   AA+ D V A   F+ +   D            Q 
Sbjct: 100 LGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQT 159

Query: 275 NE-YTMINLLSSVGGERI-------------------LRAGKQIQAFCYKVGFMEVVSIG 314
            E    + +   +G   +                    + G QI     ++G+   V  G
Sbjct: 160 GENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSG 219

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           +AL+ MY KC +++++ ++F  +  K+ +SW+++IAG  +N F +  L MF  M +  + 
Sbjct: 220 SALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVG 279

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            +    AS+L++ +    L+   Q+H+H +KS F+ D  + +  +  Y KCN + +++R+
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
               +  N    NA+ +          AL L+R +  S    +  + S  L+ACA +  L
Sbjct: 340 FDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGL 399

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
            +G  +H LA K+ + ++I V +A IDMY KC  +++A R F ++ R     WNA++  +
Sbjct: 400 SEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAH 459

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
            Q+    +  N+   M + G++PDE T+ +VL +C    L      + + +    G+   
Sbjct: 460 EQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVK--LGMASN 517

Query: 615 LEHYACIVDLLGRVGLLEGAK 635
               + +VD+  + G+++ A+
Sbjct: 518 PYIGSSLVDMYSKCGMIDEAE 538


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/767 (30%), Positives = 392/767 (51%), Gaps = 33/767 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR------DIITYNALISG 55
           I+S +I  G H D  ++++LI+ + K   F  A + +FD   +      D+  +N++I G
Sbjct: 75  IHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVK-VFDQLPKSGVSVDDVTIWNSIIDG 133

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
             RF Q    +  F R++  G +                 E + +H   ++   +   +L
Sbjct: 134 YFRFGQLEEGMVQFGRMQSSGYK-----------------EGKQIHSYIVRNMLNFDPFL 176

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  I+ Y K G    A   F+   D  N VA+  M+ G+  NG ++ S E ++  ++  
Sbjct: 177 ETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTEN 236

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +++   S T  L A      V  G+Q+H   +KVGF      +++ +++ +Y +C     
Sbjct: 237 VKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDD--PYVHTSLLTMYGKCQMIES 294

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+F+E+ + ++  W+  I+A        +A  ++K ++      + +T++N+L+S   
Sbjct: 295 AEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSM 354

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             +   G+ I     K      ++I +AL++MY K G  N A SIF  +  +D V+W S+
Sbjct: 355 AGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSV 414

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+G+ +N  + +ALD F  M    + P+   MASI+ A +  + +     +H  +IKSG 
Sbjct: 415 ISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGL 474

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            LD  + S L+  Y K      +  + S++  KN V  N++ S     +    ++ L+  
Sbjct: 475 QLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQ 534

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +    +  +F+ VL A +++  L +GK++H   ++     D+ VE+ +IDMY KCG 
Sbjct: 535 VLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGL 594

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++ A+  F +I   +L  WN+M+ GY  HG   +   LF++M   G+KPD++T+L++L+S
Sbjct: 595 LKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSS 654

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GL+ E       M    G+ P++EHY  IVDL GR G L  A   +  MP+ PD  
Sbjct: 655 CNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRS 714

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW SLL +C I+ N++LG +  +KLL ++P   S YV L NLY  A +W+    LR  MK
Sbjct: 715 IWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMK 774

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           EK L K PG SWI V      FY+GD S   + EIY  L  L  +M+
Sbjct: 775 EKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMI 821



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 166/709 (23%), Positives = 314/709 (44%), Gaps = 83/709 (11%)

Query: 53  ISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGF 109
           I  L +  Q   ALKL+ +      R   FT+ SL+KAC SL   Q  + +H   +  G 
Sbjct: 28  IKSLVQQRQYIEALKLYTKSPVYTTR---FTYPSLLKACASLSNLQYGKTIHSSIITTGL 84

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCF----RDCLDLDNVA-YTAMVCGYVWNGEFDKSK 164
            S  Y+ S  I  Y K G    A   F    +  + +D+V  + +++ GY   G+ ++  
Sbjct: 85  HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
             F  M+S G                  KEG+QIH + V+   +      L  A+++ Y 
Sbjct: 145 VQFGRMQSSGY-----------------KEGKQIHSYIVRN--MLNFDPFLETALIDTYF 185

Query: 225 RCGQKLDAVKMFDEITE-PDVVSWSERIAAACDGVEAFGLFKD-------LRFNDFQINE 276
           +CG+  +A  +F ++ +  ++V+W+  I     G    GL+++        +  + ++  
Sbjct: 186 KCGRPTEARYLFKKLKDRSNIVAWNVMIG----GFGENGLWENSLEYYLLAKTENVKVVS 241

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            +    LS+ G    +  GKQ+     KVGF +   +  +L++MYGKC  +  A  +F+ 
Sbjct: 242 SSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNE 301

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  K+   WN++I+ Y  NG+   AL ++  M   +++ + +T+ ++L + S +      
Sbjct: 302 VPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLG 361

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             +H+ I+K       ++ S L+T Y K    N +  + S + +++ V   ++ S     
Sbjct: 362 RLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQN 421

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
             + EAL+ +R +     + +    + ++ AC  +  ++ G  IH   +K+    D+FV 
Sbjct: 422 RKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVA 481

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           S+++DMY K G  E A   F  +   +L  WN+++  Y ++       NLF+++ +  + 
Sbjct: 482 SSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY 541

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP-QLEHYACIVDLLGRVGLLEGAK 635
           PD +++ +VL +      + + ++    +  L   IP  L+    ++D+  + GLL+ A+
Sbjct: 542 PDSVSFTSVLAAISSVAALLKGKSVHGYLVRL--WIPFDLQVENTLIDMYIKCGLLKYAQ 599

Query: 636 MTIDQMP----------------------------------IPPDAHIWQSLLSACTIYG 661
              +++                                   I PD   + SLLS+C   G
Sbjct: 600 HIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSG 659

Query: 662 NIDLGLLAGSKL---LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            I+ GL     +     ++P  E  YV + +LY  AG   D     K M
Sbjct: 660 LIEEGLHLFEMMKMKFGIEPRMEH-YVNIVDLYGRAGCLGDAYSFVKNM 707



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 264/552 (47%), Gaps = 31/552 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           QI+S +++N  + DP L T LI  + K     + R  F+ L D  N  I+ +N +I G  
Sbjct: 160 QIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSN--IVAWNVMIGGFG 217

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
                  +L+ +   + + ++  + +F+  + ACG    +   + VH   +K+GF    Y
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y K   I SAE  F +  D +   + A++  YV NG    +  ++ +M+   
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337

Query: 175 LELNEFSLTAVLGAS-----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           +  + F++  VL +S     +D+  G  IH   VK    S +   + +A++ +Y + G  
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDL--GRLIHTEIVKRPLQSSIT--IQSALLTMYSKFGDS 393

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +F  + E DVV+W   I+  C      EA   F+ +  +  + +   M +++S+ 
Sbjct: 394 NYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISAC 453

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G   +  G  I  F  K G    V + ++L+ MY K G    A +IF  +  K+ V+WN
Sbjct: 454 TGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWN 513

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I+ Y  N   + ++++F  +L   L P+  +  S+L A+S+  +L +   VH ++++ 
Sbjct: 514 SIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRL 573

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---AL 463
               D  + + LI  Y KC  L  ++ +   I +KN V  N++  +  Y S H E   A+
Sbjct: 574 WIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSM--IGGYGS-HGECSKAI 630

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA-LKARYDQDIFVESAV--I 520
           EL+  +  S  + +  TF  +L +C     +E+G  +H    +K ++  +  +E  V  +
Sbjct: 631 ELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEG--LHLFEMMKMKFGIEPRMEHYVNIV 688

Query: 521 DMYCKCGTIEDA 532
           D+Y + G + DA
Sbjct: 689 DLYGRAGCLGDA 700


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/681 (34%), Positives = 372/681 (54%), Gaps = 15/681 (2%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC-LDLDNV 145
           L++ C S +E   +    +K GF +     +  I  + K G    A   F    L LD V
Sbjct: 53  LLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLD-V 111

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMR--SLGLELNEFS-LTAVLGASFDVKEGEQIHGFG 202
            Y  M+ GY  N     +   F+ M    + L + +++ L  + G + D+K+G +IHG  
Sbjct: 112 LYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLI 171

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VE 259
           +  GF S +   +  A+M+LY +C Q  +A KMF+ +   D+VSW+  +A  A +G    
Sbjct: 172 ITNGFESNL--FVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  L   ++    + +  T++++L +V   + LR G+ I  + ++ GF  +V++ NAL+ 
Sbjct: 230 ALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLD 289

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY KCG    AR +F  +  K  VSWN+MI G ++NG   +A   F  ML+   +P   T
Sbjct: 290 MYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVT 349

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           M  +L A +N   L++   VH  + K     + S+++ LI+ Y KC  ++ +  + + ++
Sbjct: 350 MMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE 409

Query: 440 KKNAVHINALASVLVYAS--CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           K N V  NA+  +L YA   C  EAL L+  +     +++  T   V+ A A  +   Q 
Sbjct: 410 KTN-VTWNAM--ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQA 466

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K IH LA++A  D ++FV +A++DMY KCG I+ A++ F  +    +  WNAM+ GY  H
Sbjct: 467 KWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTH 526

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   E  +LFN+M K  VKP++IT+L+V+++C H+G V E       M + + L P ++H
Sbjct: 527 GVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDH 586

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y+ +VDLLGR G L+ A   I +MPI P   +  ++L AC I+ N++LG  A  KL +L 
Sbjct: 587 YSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLD 646

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           PD    +VLL+N+YAS  MW+ V K+R  M++K L K PG SW+ +    H FY+G ++H
Sbjct: 647 PDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNH 706

Query: 738 SQSKEIYKELIKLYEHMVATA 758
            +SK+IY  L  L + + A  
Sbjct: 707 PESKKIYAFLETLGDEIKAAG 727



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 159/605 (26%), Positives = 295/605 (48%), Gaps = 28/605 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI   +IKNG + + +  T +IS F KF     A R     + +  + Y+ ++ G A+  
Sbjct: 65  QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
             G AL  F R+    +R     ++ L++ CG    L++   +HG+ +  GF S +++++
Sbjct: 125 SLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMT 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  +I +A   F      D V++T +V GY  NG   ++ ++ ++M+  G + 
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKP 244

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L ++L A  D+K    G  IHG+  + GF S V  ++ NA++++Y +CG    A  
Sbjct: 245 DSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLV--NVTNALLDMYFKCGSARIARL 302

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +    VVSW+  I   A   +  EAF  F  +          TM+ +L +      
Sbjct: 303 VFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGD 362

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G  +     K+     VS+ N+LISMY KC +V+ A SIF+ L  K +V+WN+MI G
Sbjct: 363 LERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILG 421

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++NG   +AL++FC M    +  + +T+  ++ A+++    +QA  +H   +++    +
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNN 481

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC A+  ++++   + +++ +  NA+           E L+L+  +  
Sbjct: 482 VFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQK 541

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDMYCK 525
              + N  TF  V+ AC+    +E+G     L L     +D ++E      SA++D+  +
Sbjct: 542 GAVKPNDITFLSVISACSHSGFVEEG-----LLLFKSMQEDYYLEPTMDHYSAMVDLLGR 596

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYL 583
            G ++DA    +++           M+G  +    H+   L  K ++  F + PDE  Y 
Sbjct: 597 AGQLDDAWNFIQEMPIKPGISVLGAMLGACK---IHKNVELGEKAAQKLFKLDPDEGGYH 653

Query: 584 AVLTS 588
            +L +
Sbjct: 654 VLLAN 658


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 241/763 (31%), Positives = 397/763 (52%), Gaps = 23/763 (3%)

Query: 1   QIYSLLIKN--GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++S + K      LD  L+  L+  + K      A +   +  +R    +N +I     
Sbjct: 101 QLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
             +   AL L+  +R +G+     +F +L+KAC  L++      +H + +KLG+ S  ++
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           V+  +  YAK+ ++ +A   F    +  D V + +++  Y  +G+  ++ E+F EM   G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 175 LELNEFS----LTAVLGASFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCG 227
              N ++    LTA  G S+  K G++IH   +K    S    VCN    A++ +Y RCG
Sbjct: 280 PAPNSYTIVSALTACDGFSY-AKLGKEIHASVLKSSTHSSELYVCN----ALIAMYTRCG 334

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS 284
           +   A ++  ++   DVV+W+  I      +   EA   F D+     + +E +M ++++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           + G    L AG ++ A+  K G+   + +GN LI MY KC         F  +  KD +S
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W ++IAGY++N    +AL++F  + +  +  +   + SIL A S  KS+    ++H HI+
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 514

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G LLD  + + L+  YGKC  +  + RV   I  K+ V   ++ S        +EA+E
Sbjct: 515 RKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 573

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +  +    +      +L A A+++ L +G+ IHC  L+  +  +  +  AV+DMY 
Sbjct: 574 LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYA 633

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            CG ++ AK  F +I R  L  + +M+  Y  HGC      LF+KM    V PD I++LA
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C HAGL+ E R +L  M   + L P  EHY C+VD+LGR   +  A   +  M   
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P A +W +LL+AC  +   ++G +A  +LLEL+P N    VL+SN++A  G WNDV K+R
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            +MK   + K PG SWI + G  H F A D SH +SKEIY++L
Sbjct: 814 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 15/282 (5%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKS--GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           A +LE     +++ Q  Q+HS I K+   F L D +   L+  YGKC +L+++++V  E+
Sbjct: 84  AYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL-DFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             + A   N +    V     A AL LY  +      +  S+F  +LKACA + D+  G 
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
            +H L +K  Y    F+ +A++ MY K   +  A+R F        A  WN+++  Y+  
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVREARTYLSCMSDLHGLIPQ 614
           G   E   LF +M   G  P+  T ++ LT+C    +A L +E        S L      
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA-----SVLKSSTHS 317

Query: 615 LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            E Y C  ++ +  R G +  A+  + QM    D   W SL+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 39/280 (13%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            F+ VL+ C     + QG+ +H    K    ++ D F+   ++ MY KCG+++DA++ F 
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++   +   WN M+  Y  +G       L+  M   GV     ++ A+L +C     +R 
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200

Query: 598 ARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
                   S+LH L+ +L +++       +V +  +   L  A+   D      DA +W 
Sbjct: 201 G-------SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           S+LS+ +  G   L  L   + + +     ++Y ++S L A                   
Sbjct: 254 SILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTAC------------------ 294

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
                G+S+  +G   H      S+HS    +   LI +Y
Sbjct: 295 ----DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 241/763 (31%), Positives = 397/763 (52%), Gaps = 23/763 (3%)

Query: 1   QIYSLLIKN--GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++S + K      LD  L+  L+  + K      A +   +  +R    +N +I     
Sbjct: 101 QLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
             +   AL L+  +R +G+     +F +L+KAC  L++      +H + +KLG+ S  ++
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           V+  +  YAK+ ++ +A   F    +  D V + +++  Y  +G+  ++ E+F EM   G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 175 LELNEFS----LTAVLGASFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCG 227
              N ++    LTA  G S+  K G++IH   +K    S    VCN    A++ +Y RCG
Sbjct: 280 PAPNSYTIVSALTACDGFSY-AKLGKEIHASVLKSSTHSSELYVCN----ALIAMYTRCG 334

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS 284
           +   A ++  ++   DVV+W+  I      +   EA   F D+     + +E +M ++++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           + G    L AG ++ A+  K G+   + +GN LI MY KC         F  +  KD +S
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W ++IAGY++N    +AL++F  + +  +  +   + SIL A S  KS+    ++H HI+
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 514

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G LLD  + + L+  YGKC  +  + RV   I  K+ V   ++ S        +EA+E
Sbjct: 515 RKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 573

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +  +    +      +L A A+++ L +G+ IHC  L+  +  +  +  AV+DMY 
Sbjct: 574 LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYA 633

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            CG ++ AK  F +I R  L  + +M+  Y  HGC      LF+KM    V PD I++LA
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C HAGL+ E R +L  M   + L P  EHY C+VD+LGR   +  A   +  M   
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P A +W +LL+AC  +   ++G +A  +LLEL+P N    VL+SN++A  G WNDV K+R
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            +MK   + K PG SWI + G  H F A D SH +SKEIY++L
Sbjct: 814 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 15/282 (5%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKS--GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           A +LE     +++ Q  Q+HS I K+   F L D +   L+  YGKC +L+++++V  E+
Sbjct: 84  AYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL-DFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             + A   N +    V     A AL LY  +      +  S+F  +LKACA + D+  G 
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
            +H L +K  Y    F+ +A++ MY K   +  A+R F        A  WN+++  Y+  
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVREARTYLSCMSDLHGLIPQ 614
           G   E   LF +M   G  P+  T ++ LT+C    +A L +E        S L      
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA-----SVLKSSTHS 317

Query: 615 LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            E Y C  ++ +  R G +  A+  + QM    D   W SL+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 117/280 (41%), Gaps = 39/280 (13%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            F+ VL+ C     + QG+ +H    K    ++ D F+   ++ MY KCG+++DA++ F 
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++   +   WN M+  Y  +G       L+  M   GV     ++ A+L +C     +R 
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200

Query: 598 ARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
                   S+LH L+ +L +++       +V +  +   L  A+   D      DA +W 
Sbjct: 201 G-------SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           S+LS+ +  G   L  L   + + +     ++Y ++S L A                   
Sbjct: 254 SILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTA------------------- 293

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
            C   G+S+  +G   H      S+HS    +   LI +Y
Sbjct: 294 -CD--GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/759 (30%), Positives = 394/759 (51%), Gaps = 18/759 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L  + G   +  + T L+  +        A R  ++   R+++++ AL+  L+    
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVS 117
               L+ + ++R +G+  +A  F+++V  CGSL ENE+    V    +  G  ++V + +
Sbjct: 126 LEETLRAYRQMRREGVPCNANAFATVVSLCGSL-ENEVPGLQVASHVIVSGLQNQVSVAN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +   G +  AE  F    + D ++  AM+  Y   G   K   VF +MR  GL  
Sbjct: 185 SLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244

Query: 178 NEFSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L +++   AS D    G  IH   ++    S V   + NA++N+Y   G+  DA  
Sbjct: 245 DATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVT--VINALVNMYSAAGKLSDAEF 302

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  ++  D++SW+  I++    C+  +A      L   +   N  T  + L +      
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGA 362

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK + A   ++     + +GN+LI+MYGKC  + DA  +F  +   D VS+N +I G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGG 422

Query: 352 YS--ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSGF 408
           Y+  E+G   +A+ +F  +    + PN  TM +I  + ++S  L      +H++II++GF
Sbjct: 423 YAVLEDG--TKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGF 480

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           L D+ + + LIT Y KC  L  S  + + I  KN V  NA+ +         EAL+L+  
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFID 540

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +  +++    +  L +CA++  LE+G  +H L +K+  D D +V +A +DMY KCG 
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGK 600

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           + +  +            WN ++ GYA++G + E    F +M   G KPD +T++A+L++
Sbjct: 601 MNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSA 660

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGLV +   Y + M+   G+ P ++H  CIVDLLGR+G    A+  I++MP+ P+  
Sbjct: 661 CSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDL 720

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW+SLLS+   + N+++G  A  KLLEL P ++S YVLLSNLYA+   W DV KLR  MK
Sbjct: 721 IWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMK 780

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
              + K P  SW+ +      F  GD  H  +++IY +L
Sbjct: 781 TININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKL 819



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 159/639 (24%), Positives = 295/639 (46%), Gaps = 31/639 (4%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---- 98
           +R   T+   +SG  R  +   A +L   +R +G+    F  +SLV AC     +E    
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 99  --IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +H +  + G    VY+ +  +  Y   G +  A   F +  + + V++TA++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFL-SGVCNHL 215
           NG  +++   + +MR  G+  N  +   V+     ++   ++ G  V    + SG+ N +
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLE--NEVPGLQVASHVIVSGLQNQV 180

Query: 216 N--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFN 270
           +  N+++ ++   G+  DA K+FD + E D +S +  I+  +  G+  + F +F D+R +
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
             + +  T+ +L+S          G  I + C +      V++ NAL++MY   G+++DA
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F  +  +D +SWN+MI+ Y +N     AL     +   + IPN  T +S L A S+ 
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            +L     VH+ +++     +  + + LIT YGKCN++ ++++V   +   + V  N L 
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLI 420

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ-GKAIHCLALKARY 509
                     +A++++  I  +  + N  T   +  +  +  DL   G+ +H   ++  +
Sbjct: 421 GGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGF 480

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             D +V +++I MY KCG +E +   F  I   ++  WNA++   AQ G   E   LF  
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFID 540

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACIV----D 623
           M   G K D +     L+SC     + E          LHGL  +  L+  + +V    D
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGM-------QLHGLGMKSGLDSDSYVVNAAMD 593

Query: 624 LLGRVGLL-EGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           + G+ G + E  +M  DQ   P     W +L+S    YG
Sbjct: 594 MYGKCGKMNEMLQMVPDQAIRP--QQCWNTLISGYAKYG 630


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 396/761 (52%), Gaps = 16/761 (2%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            QI+  ++K G   +  + T+L+  +        A +   + +  +I+++ +L+   A   
Sbjct: 270  QIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNG 329

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGF-SSRVYLV 116
             +   L ++  LR+ GL     T +++++ CG   +  +   + G  +K G  +S V + 
Sbjct: 330  HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389

Query: 117  SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            +  I  +     +  A   F +  + D +++ +++     NG F++S   F  MR    +
Sbjct: 390  NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 177  LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             +  +++A+L   G++  +K G  +HG   K G  S VC  + N+++++Y + G   DA 
Sbjct: 450  TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVC--VCNSLLSMYAQAGSSEDAE 507

Query: 234  KMFDEITEPDVVSWSERIAAAC-DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             +F  +   D++SW+  +A+   DG    A  L  ++      +N  T    LS+     
Sbjct: 508  LVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN-- 565

Query: 291  ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             L   K + AF         + IGN L++MYGK G +++A+ +   +  +D V+WN++I 
Sbjct: 566  -LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIG 624

Query: 351  GYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL-EAVSNSKSLKQAMQVHSHIIKSGFL 409
            G++++   N  +  F  M    L+ N  T+ ++L   +S    LK  M +H+HI+ +GF 
Sbjct: 625  GHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFE 684

Query: 410  LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            LD  + S LIT Y +C  LN S  +   +  KN+   NA+ S   +     EAL+    +
Sbjct: 685  LDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARM 744

Query: 470  WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                 +++  +FS+ L     +T L++G+ +H   +K  ++ D +V +A +DMY KCG I
Sbjct: 745  RNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEI 804

Query: 530  EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            +D  R        S   WN ++   A+HG + + +  F++M   G+KPD +T++++L++C
Sbjct: 805  DDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSAC 864

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             H GLV E   Y S M+   G+   +EH  CI+DLLGR G L  A+  ID+MP+PP+  +
Sbjct: 865  SHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFV 924

Query: 650  WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            W+SLL+AC ++GN++LG  A  +L EL   ++S YVL SN+ AS   W DV  +RK+M+ 
Sbjct: 925  WRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMES 984

Query: 710  KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + L K+P  SWI +      F  GD  H QS +IY +L +L
Sbjct: 985  QSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEEL 1025



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/706 (24%), Positives = 328/706 (46%), Gaps = 31/706 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L +K+    +   + TL++ ++KF   + A        +R+  ++N +ISG  R   
Sbjct: 169 LHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGW 228

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRVYLVS 117
              A++ F  +   G+ P ++  +S+V AC   G + E    +HG  +K G  S V++ +
Sbjct: 229 YHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGT 288

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y   G +  A   F +  + + V++T+++  Y  NG   +   ++  +R  GL  
Sbjct: 289 SLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLIC 348

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
              ++  V+   G   D   G QI G  +K G  +   + + N++++++       +A +
Sbjct: 349 TGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVS-VANSLISMFGNYDSVEEASR 407

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + E D +SW+  I A+       E+ G F  +R    + +  T+  LL + G  + 
Sbjct: 408 VFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQH 467

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ G+ +     K G    V + N+L+SMY + G   DA  +F  +  +D +SWNSM+A 
Sbjct: 468 LKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMAS 527

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           + E+G ++ A+ +   ML+     N  T  + L A  N + LK    VH+ +I   F + 
Sbjct: 528 HVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLK---IVHAFVIH--FAVH 582

Query: 412 DSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            ++I  + L+T YGK   ++E+++V   + +++ V  NAL             ++ +  +
Sbjct: 583 HNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLM 642

Query: 470 WGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                  N  T   +L  C +    L+ G  IH   + A ++ D +V+S++I MY +CG 
Sbjct: 643 RREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGD 702

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  +   F  +   + + WNA+    A +G   E      +M   GV  D+ ++   L +
Sbjct: 703 LNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALAT 762

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPP- 645
             +  ++ E +   S +  L G   +L+ Y     +D+ G+ G ++        +PIP  
Sbjct: 763 IGNLTVLDEGQQLHSWIIKL-GF--ELDEYVLNATMDMYGKCGEIDD---VFRILPIPKI 816

Query: 646 -DAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
                W  L+SA   +G       A  ++L+  L+PD+ +   LLS
Sbjct: 817 RSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLS 862



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 16/370 (4%)

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GK + A C K    +     N L++MY K G +  A+ +FD +  ++  SWN+MI+G+  
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSGFLLDDS 413
            G++++A+  FCHM E  + P+ Y +AS++ A   S  + + A Q+H +++K G + +  
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L+  YG   +++E+ ++  EI++ N V   +L           E L +YR +  + 
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDA 532
               G+T + V++ C    D   G  I    +K+  D   + V +++I M+    ++E+A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            R F  +       WN+++   A +G + E    F  M +   K D IT  A+L +C  A
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465

Query: 593 GLVREARTYLSCMSDLHGLIPQ--LEHYACIVDLL----GRVGLLEGAKMTIDQMPIPPD 646
             ++  R        LHGLI +  LE   C+ + L     + G  E A++    MP   D
Sbjct: 466 QHLKWGR-------GLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP-ARD 517

Query: 647 AHIWQSLLSA 656
              W S++++
Sbjct: 518 LISWNSMMAS 527



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 1/169 (0%)

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           K  + +++   GKA+H L +K    Q+ F  + +++MY K G+I+ A+  F K+   + A
Sbjct: 155 KGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDA 214

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN M+ G+ + G YH+    F  M + GV P      +++T+C  +G + E    +   
Sbjct: 215 SWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGY 274

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
               GL+  +     ++   G  G +  A    +++   P+   W SL+
Sbjct: 275 VVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/666 (32%), Positives = 357/666 (53%), Gaps = 12/666 (1%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           + VH   +K G     +  +  +  Y K   +  A+  F      + + +T+++ GY+ +
Sbjct: 87  QAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLED 146

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH 214
            +F  +  +  +M   G   NE + T +L A     +   GEQIH F +K GF   V   
Sbjct: 147 NDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENV--F 204

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND 271
           +  +++ +Y + G    A K+FD +   D+   +  I     A +G +A  +FK+L  + 
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDG 264

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+  +YT  N++S+  G+  +  GKQ+Q   +K GF+   S+GNA+I+MYG  G   +A 
Sbjct: 265 FEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAE 324

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNS 390
            +F  +  K+ +SW ++I+GYS +G+  +A+D F  +  E  +  +   + +IL+  S+ 
Sbjct: 325 RMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDC 384

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA-L 449
            +L+  +Q+H  ++K G   D ++ + L+  Y KC  L  ++ V   +  K     NA L
Sbjct: 385 NNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAIL 444

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           A  L  +    + + L+  +  +  + +  TFS +L   A    LE+G++ H   +K  +
Sbjct: 445 AGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGF 504

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           D +I V ++VI MY KCG+IEDA + F  + CRDS++ WNA++  YA HG   +   LF 
Sbjct: 505 DTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSIS-WNALISAYALHGQAQKSLFLFE 563

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M + G  PDE T LA+L +C ++GL ++     + M   +G+ P LEHYAC+ DLLGR 
Sbjct: 564 EMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRA 623

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  A   I + P P    +W++L++ C ++GN++ G LA   LL+L P    +Y+L+S
Sbjct: 624 GYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVS 683

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YAS  M ++  K+RK M +    KE G SWI +    HHF A D  H +S+EIY  L 
Sbjct: 684 NMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFVASDKDHPESREIYTRLE 743

Query: 749 KLYEHM 754
            L + M
Sbjct: 744 LLTDEM 749



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 211/402 (52%), Gaps = 15/402 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+  +IK+G   +  + T+LI+ +TK   F  A + +FD+   +DI   N +I    R 
Sbjct: 189 QIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEK-VFDSMGFKDIRCLNFMILEYGRA 247

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
              G A+++F  L   G  P  +TF++++  C     ++E + + G+  K GF S   + 
Sbjct: 248 GNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVG 307

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-LGL 175
           +  I  Y  SG    AE  F    + + +++TA++ GY  +G   K+ + F+ +   LG+
Sbjct: 308 NAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGI 367

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +   LTA+L    D   ++ G QIHGF +K+G    V  ++  A+++LY +C +   A
Sbjct: 368 NFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDV--NVATALVDLYAKCEKLQSA 425

Query: 233 VKMFDEITEPDVVSWSERIA----AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             +FD ++   + S++  +A    ++ D  +   LF  LR    + +  T   LLS +  
Sbjct: 426 RIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLAN 485

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
           +  L  G+   A+  K GF   +S+ N++ISMY KCG + DA  +F+ +  +DS+SWN++
Sbjct: 486 QASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNAL 545

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           I+ Y+ +G   ++L +F  M      P+ +T+ +IL+A + S
Sbjct: 546 ISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYS 587



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 241/509 (47%), Gaps = 33/509 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++S L+K G   D      +++ + KF     A +     + R+ IT+ +LI G      
Sbjct: 89  VHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDND 148

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSG 118
              A  +   +   G   +  T + +++AC S  +    E +H   +K GF   V++ + 
Sbjct: 149 FQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTS 208

Query: 119 FIENYAKSG-----EIVSAEMCFRD--CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            I  Y KSG     E V   M F+D  CL+        M+  Y   G   K+ EVF  + 
Sbjct: 209 LIAMYTKSGFFDVAEKVFDSMGFKDIRCLNF-------MILEYGRAGNGGKAIEVFKNLL 261

Query: 172 SLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           + G E  +++ T ++        V+EG+Q+ G   K GFLS     + NAI+ +Y   G 
Sbjct: 262 NDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETS--VGNAIITMYGNSGM 319

Query: 229 KLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAF-GLFKDLRFNDFQINEYTMIN 281
             +A +MF  ++E +++SW+  I+           V+AF GL  +L  N    +   +  
Sbjct: 320 PKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGIN---FDSTLLTA 376

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L        L  G QI  F  K+G    V++  AL+ +Y KC ++  AR +FD+L  K 
Sbjct: 377 ILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKG 436

Query: 342 SVSWNSMIAGYSE-NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
             S+N+++AG+ E +G     + +F  +    + P+  T + +L  ++N  SL++    H
Sbjct: 437 IASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFH 496

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           ++ +K+GF  + S+ + +I+ Y KC ++ ++ ++ + ++ ++++  NAL S         
Sbjct: 497 AYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQ 556

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACA 489
           ++L L+  +     + +  T   +L+AC 
Sbjct: 557 KSLFLFEEMKRKGFDPDEFTILAILQACT 585



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 14/361 (3%)

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
           G R    G+ + ++  K G  +    GN ++++Y K  +++ A+ +FD +  +++++W S
Sbjct: 79  GSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTS 138

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I GY E+  F  A  +   M +F    N +T   IL+A S+        Q+H  +IKSG
Sbjct: 139 LIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSG 198

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           F  +  + + LI  Y K    + +++V   +  K+   +N +      A    +A+E+++
Sbjct: 199 FDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFK 258

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +     E    TF+ ++  C     +E+GK +  LA K  +  +  V +A+I MY   G
Sbjct: 259 NLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSG 318

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVL 586
             ++A+R F  +   +L  W A++ GY++ G   +  + F  +  + G+  D     A+L
Sbjct: 319 MPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAIL 378

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQL------EHYACIVDLLGRVGLLEGAKMTIDQ 640
             C            L     +HG + +L           +VDL  +   L+ A++  D 
Sbjct: 379 DCCSDC-------NNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDH 431

Query: 641 M 641
           +
Sbjct: 432 L 432



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQ 61
           ++  +K G   +  ++ ++IS + K      A + +F+  N RD I++NALIS  A   Q
Sbjct: 496 HAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQ-MFNIMNCRDSISWNALISAYALHGQ 554

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSGF 119
           +  +L LF+ ++ +G  PD FT  ++++AC    L ++    G+CL        Y +   
Sbjct: 555 AQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKD----GICL-FNLMEPKYGIKPL 609

Query: 120 IENYAKSGEIVSAEMCFRDCLDL 142
           +E+YA   +++       + +D+
Sbjct: 610 LEHYACMADLLGRAGYLSEAMDI 632



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 51/106 (48%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           ++K      D   G+A+H   +KA    D F  + V+++Y K   ++ A++ F ++   +
Sbjct: 73  LIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRN 132

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
              W +++ GY +   +    ++   M KFG   +E T   +L +C
Sbjct: 133 TITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQAC 178


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/733 (32%), Positives = 385/733 (52%), Gaps = 23/733 (3%)

Query: 32  RRAF---RFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLV 88
           RRA    +   +  +R    +N +I       +   AL L+  +R +G+     +F +L+
Sbjct: 93  RRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 152

Query: 89  KACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DN 144
           KAC  L++      +H + +KLG+ S  ++V+  +  YAK+ ++ +A   F    +  D 
Sbjct: 153 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 212

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS----LTAVLGASFDVKEGEQIHG 200
           V + +++  Y  +G+  ++ E+F EM   G   N ++    LTA  G S+  K G++IH 
Sbjct: 213 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY-AKLGKEIHA 271

Query: 201 FGVKVGFLSG---VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
             +K    S    VCN    A++ +Y RCG+   A ++  ++   DVV+W+  I      
Sbjct: 272 SVLKSSTHSSELYVCN----ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 327

Query: 258 V---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           +   EA   F D+     + +E +M +++++ G    L AG ++ A+  K G+   + +G
Sbjct: 328 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 387

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N LI MY KC         F  +  KD +SW ++IAGY++N    +AL++F  + +  + 
Sbjct: 388 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 447

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            +   + SIL A S  KS+    ++H HI++ G LLD  + + L+  YGKC  +  + RV
Sbjct: 448 IDEMILGSILRASSVLKSMLIVKEIHCHILRKG-LLDTVIQNELVDVYGKCRNMGYATRV 506

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              I  K+ V   ++ S        +EA+EL+R +  +    +      +L A A+++ L
Sbjct: 507 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 566

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
            +G+ IHC  L+  +  +  +  AV+DMY  CG ++ AK  F +I R  L  + +M+  Y
Sbjct: 567 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 626

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HGC      LF+KM    V PD I++LA+L +C HAGL+ E R +L  M   + L P 
Sbjct: 627 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 686

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
            EHY C+VD+LGR   +  A   +  M   P A +W +LL+AC  +   ++G +A  +LL
Sbjct: 687 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 746

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           EL+P N    VL+SN++A  G WNDV K+R +MK   + K PG SWI + G  H F A D
Sbjct: 747 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD 806

Query: 735 SSHSQSKEIYKEL 747
            SH +SKEIY++L
Sbjct: 807 KSHPESKEIYEKL 819



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 276/546 (50%), Gaps = 19/546 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD--TQNRDIITYNALISGLAR 58
           +++SLL+K G+H    +   L+S + K  D   A R LFD   +  D + +N+++S  + 
Sbjct: 166 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA-RRLFDGFQEKGDAVLWNSILSSYST 224

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVY 114
             +S   L+LF  +   G  P+++T  S + AC      ++   +H   LK    SS +Y
Sbjct: 225 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 284

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y + G++  AE   R   + D V + +++ GYV N  + ++ E F +M + G
Sbjct: 285 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 344

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            + +E S+T+++ AS    ++  G ++H + +K G+ S +   + N ++++Y +C     
Sbjct: 345 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL--QVGNTLIDMYSKCNLTCY 402

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             + F  + + D++SW+  IA        VEA  LF+D+     +I+E  + ++L +   
Sbjct: 403 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 462

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + +   K+I     + G ++ V I N L+ +YGKC  +  A  +F+ +  KD VSW SM
Sbjct: 463 LKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 521

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+  + NG  ++A+++F  M+E  L  +   +  IL A ++  +L +  ++H ++++ GF
Sbjct: 522 ISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF 581

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            L+ S+   ++  Y  C  L  +K V   I++K  +   ++ +      C   A+EL+  
Sbjct: 582 CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDK 641

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV--IDMYCKC 526
           +       +  +F  +L AC+    L++G+    + ++  Y+ + + E  V  +DM  + 
Sbjct: 642 MRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI-MEHEYELEPWPEHYVCLVDMLGRA 700

Query: 527 GTIEDA 532
             + +A
Sbjct: 701 NCVVEA 706


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/740 (30%), Positives = 380/740 (51%), Gaps = 58/740 (7%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           +S   +  D   A   L +  +R+++++N +I+ LAR  ++G AL+L++ +  +GL P  
Sbjct: 81  LSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTH 140

Query: 82  FTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           FT +S++ ACG+   L +    HG+ +K+G    +++ +  +  Y K G +  A   F  
Sbjct: 141 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDG 200

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-------SFD 191
               + V++TAM+ G V  G  D +  +F  M   G+ ++  ++++VLG+        FD
Sbjct: 201 MASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFD 260

Query: 192 V----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           V    + G+ IH   V+ GF  G   H+ N+++++Y +C Q  +AVK+FD +     VSW
Sbjct: 261 VVRAFRLGQCIHALIVRKGF--GSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSW 318

Query: 248 SERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I     A    +A  +   +  +  + NE T  N+L+S                C K
Sbjct: 319 NILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLAS----------------CIK 362

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
               +V+S                 AR++FD +      +WN++++GY +       +++
Sbjct: 363 A--RDVLS-----------------ARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVEL 403

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTY 422
           F  M   ++ P+  T+A IL + S    L    QVHS  ++  FLL + M   S L+  Y
Sbjct: 404 FRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVR--FLLHNDMFVASGLVDMY 461

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  +  ++ + + + +++ V  N++ S L   S + EA + ++ + G+      S+++
Sbjct: 462 SKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYA 521

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            ++ +CA ++ + QG+ IH   +K  YDQ+++V SA+IDMY KCG ++DA+  F  +   
Sbjct: 522 SMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTK 581

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           ++  WN M+ GYAQ+G   +  +LF  M     +PD +T++AVLT C H+GLV EA  + 
Sbjct: 582 NIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFF 641

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + M   +G+ P  EHY C++D LGR G L   +  ID MP   D  +W+ LL+AC ++ N
Sbjct: 642 NSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHN 701

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            +LG  A   L  L P N S YVLLSN+YAS G   D   +R  M  + + K  GYSWI 
Sbjct: 702 AELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWID 761

Query: 723 VGGYTHHFYAGDSSHSQSKE 742
                H F   D   +   E
Sbjct: 762 HKDGVHAFMVADDLQTDGGE 781



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/575 (22%), Positives = 252/575 (43%), Gaps = 58/575 (10%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L +K G   +  +   L+  +TK      A R      + + +++ A++ GL +    
Sbjct: 163 HGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSV 222

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG-----------SLQENEIVHGVCLKLGFSS 111
             AL+LF R+   G+R D    SS++ +C            + +  + +H + ++ GF S
Sbjct: 223 DDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGS 282

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++ +  I+ Y K  ++  A   F    ++  V++  ++ G+   G + K+ EV   M 
Sbjct: 283 DQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLME 342

Query: 172 SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G E NE + + +L +    ++                                   L 
Sbjct: 343 ESGSEPNEVTYSNMLASCIKARD----------------------------------VLS 368

Query: 232 AVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           A  MFD+I+ P V +W+  ++  C      D VE   LF+ ++  + Q +  T+  +LSS
Sbjct: 369 ARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVE---LFRRMQHQNVQPDRTTLAVILSS 425

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                IL  G Q+ +   +      + + + L+ MY KCGQ+  AR IF+ +  +D V W
Sbjct: 426 CSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCW 485

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NSMI+G + +    +A D F  M    ++P   + AS++ + +   S+ Q  Q+H+ I+K
Sbjct: 486 NSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVK 545

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G+  +  + S LI  Y KC  +++++     +  KN V  N +           +A++L
Sbjct: 546 DGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDL 605

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMY 523
           +  +  + +  +G TF  VL  C+    +++  A    ++++ Y      E  + +ID  
Sbjct: 606 FEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFN-SMESTYGITPLAEHYTCLIDGL 664

Query: 524 CKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQH 557
            + G + + +     + C+D    W  ++   A H
Sbjct: 665 GRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVH 699



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 208/448 (46%), Gaps = 41/448 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L+++ G   D  +  +LI  +TK      A +      N   +++N LI+G  +   
Sbjct: 271 IHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGS 330

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              AL++ + +   G  P+  T+S+++ +C                              
Sbjct: 331 YAKALEVLNLMEESGSEPNEVTYSNMLASC------------------------------ 360

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
              K+ +++SA   F          +  ++ GY        + E+F  M+   ++ +  +
Sbjct: 361 --IKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTT 418

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L  +L +      +  G Q+H   V+  FL      + + ++++Y +CGQ   A  +F+ 
Sbjct: 419 LAVILSSCSRLGILDLGTQVHSASVR--FLLHNDMFVASGLVDMYSKCGQIGIARIIFNR 476

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +TE DVV W+  I+         EAF  FK +R N     E +  ++++S      +  G
Sbjct: 477 MTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQG 536

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A   K G+ + V +G+ALI MY KCG ++DAR  FD ++ K+ V+WN MI GY++N
Sbjct: 537 RQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQN 596

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSM 414
           GF  +A+D+F +ML     P+G T  ++L   S+S  + +A+   + +  + G       
Sbjct: 597 GFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEH 656

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKN 442
            +CLI   G+   L E + ++  +  K+
Sbjct: 657 YTCLIDGLGRAGRLVEVEALIDNMPCKD 684



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 206/455 (45%), Gaps = 48/455 (10%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQ 273
           NA ++   R G    A  + DE+ + +VVSW+  IAA        EA  L++ +      
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
              +T+ ++LS+ G    L  G++      KVG  E + + NAL+ MY KCG V DA  +
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS--- 390
           FD +   + VS+ +M+ G  + G  + AL +F  M    +  +   ++S+L + + +   
Sbjct: 198 FDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACAS 257

Query: 391 -----KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
                ++ +    +H+ I++ GF  D  + + LI  Y KC  ++E+ +V   +   + V 
Sbjct: 258 EFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVS 317

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            N L +    A  +A+ALE+   +  S  E N  T+S +L +C                +
Sbjct: 318 WNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASC----------------I 361

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           KAR   D+                  A+  F KI R S+  WN ++ GY Q   + +   
Sbjct: 362 KAR---DVL----------------SARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVE 402

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF +M    V+PD  T   +L+SC   G++ +  T +   S    L   +   + +VD+ 
Sbjct: 403 LFRRMQHQNVQPDRTTLAVILSSCSRLGIL-DLGTQVHSASVRFLLHNDMFVASGLVDMY 461

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
            + G +  A++  ++M    D   W S++S   I+
Sbjct: 462 SKCGQIGIARIIFNRM-TERDVVCWNSMISGLAIH 495



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 179/371 (48%), Gaps = 32/371 (8%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           NA +S   + G ++ AR++ D +  ++ VSWN++IA  + +    +AL+++  ML   L+
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESK 432
           P  +T+AS+L A     +L    + H   +K G  LD+++   + L+  Y KC  + ++ 
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVG--LDENLFVENALLGMYTKCGGVEDAV 195

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL----KAC 488
           R+   +   N V   A+   LV A    +AL L+  +  S   V+    S VL    +AC
Sbjct: 196 RLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQAC 255

Query: 489 AAMTDLEQ----GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           A+  D+ +    G+ IH L ++  +  D  V +++IDMY KC  +++A + F  +   S 
Sbjct: 256 ASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNIST 315

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             WN ++ G+ Q G Y +   + N M + G +P+E+TY  +L SC  A  V  AR     
Sbjct: 316 VSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDK 375

Query: 605 MSD---------LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           +S          L G   Q E +   V+L  R          +    + PD      +LS
Sbjct: 376 ISRPSVTTWNTLLSGYC-QEELHQDTVELFRR----------MQHQNVQPDRTTLAVILS 424

Query: 656 ACTIYGNIDLG 666
           +C+  G +DLG
Sbjct: 425 SCSRLGILDLG 435



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 177/365 (48%), Gaps = 21/365 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           ++ +L+ ++G   + +  + +++   K  D   A R +FD  +R  + T+N L+SG   +
Sbjct: 336 EVLNLMEESGSEPNEVTYSNMLASCIKARDVLSA-RAMFDKISRPSVTTWNTLLSG---Y 391

Query: 60  CQS---GPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
           CQ       ++LF R+++Q ++PD  T + ++ +C   G L     VH   ++    + +
Sbjct: 392 CQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDM 451

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ SG ++ Y+K G+I  A + F    + D V + +M+ G   +   +++ + F +MR  
Sbjct: 452 FVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGN 511

Query: 174 GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+   E S  +++ +      V +G QIH   VK G+   V  ++ +A++++Y +CG   
Sbjct: 512 GMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNV--YVGSALIDMYAKCGNMD 569

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA   FD +   ++V+W+E I        G +A  LF+ +   + + +  T I +L+   
Sbjct: 570 DARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCS 629

Query: 288 GERIL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSW 345
              ++  A     +     G   +      LI   G+ G++ +  ++ D +  K D + W
Sbjct: 630 HSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVW 689

Query: 346 NSMIA 350
             ++A
Sbjct: 690 EVLLA 694


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/731 (31%), Positives = 371/731 (50%), Gaps = 22/731 (3%)

Query: 43  NRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQE 96
           N   IT     S +   C  G    AL   D ++   +  +  T+ +L++ C    +  E
Sbjct: 53  NPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              VH    K      V L +  +  + + G++V A   F    + D  ++  +V GY  
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
            G FD++  ++  M  +G+  + ++   VL   G   D+  G ++H   ++ GF S V  
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDV-- 230

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDL 267
            + NA++ +YV+CG    A  +FD +   D +SW+  I+         +G+  F + ++ 
Sbjct: 231 DVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF 290

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
             +   +   ++I+   ++G ER+   G+++  +  K GF+  VS+ N+LI M+   G  
Sbjct: 291 FVDPDLMTMTSVISACEALGDERL---GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCW 347

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
           ++A  +F  + FKD VSW +MI+GY +NG   +A++ +  M    ++P+  T+AS+L A 
Sbjct: 348 DEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSAC 407

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +    L + + +H    ++G      + + LI  Y KC  ++++  V   I  KN +   
Sbjct: 408 AGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWT 467

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           ++   L       EAL  ++ +  S +  N  T   VL ACA +  L  GK IH  AL+ 
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILSLKP-NSVTLVSVLSACARIGALSCGKEIHAHALRT 526

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
               D F+ +A++DMY +CG +E A   F   C   +A WN ++ GYAQ G       LF
Sbjct: 527 GLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELF 585

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           +KM +  V PDEIT+ ++L +C  +G+V +   Y   M     + P L+HYA +VDLLGR
Sbjct: 586 HKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGR 645

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G LE A   I +MPI PD  IW +LL+AC IY N++LG LA   + E+   +   Y+LL
Sbjct: 646 AGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILL 705

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            NLYA +G W++V ++RK M+E  L  +PG SW+ V G  H F  GD  H Q KEI   L
Sbjct: 706 CNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVL 765

Query: 748 IKLYEHMVATA 758
              YE M AT 
Sbjct: 766 EGFYEKMEATG 776



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 272/566 (48%), Gaps = 23/566 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S + K    L   L   L+S F +F D   A+        RD+ ++N L+ G A+  
Sbjct: 115 RVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG 174

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL L+ R+ + G+RPD +TF  +++ CG L +      VH   ++ GF S V +V+
Sbjct: 175 YFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN 234

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G+I SA + F      D +++ AM+ GY  N    +   +F  MR   ++ 
Sbjct: 235 ALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDP 294

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++T+V+ A     D + G ++HG+ +K GF++ V   +NN+++ ++   G   +A  
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS--VNNSLIQMHSSVGCWDEAEM 352

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGL-------FKDLRFNDFQINEYTMINLLSSVG 287
           +F ++   D+VSW+  I+    G E  GL       +  +       +E T+ ++LS+  
Sbjct: 353 VFSKMEFKDLVSWTAMIS----GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA 408

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
           G  +L  G  +  F  + G    V + N+LI MY KC  ++ A  +F  +  K+ +SW S
Sbjct: 409 GLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTS 468

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I G   N    +AL  F  M+  SL PN  T+ S+L A +   +L    ++H+H +++G
Sbjct: 469 IILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              D  + + L+  Y +C  +  +    +  + K+    N L +          A+EL+ 
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFH 586

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +  S    +  TF+ +L AC+    +  G +    +  K     ++   ++V+D+  + 
Sbjct: 587 KMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRA 646

Query: 527 GTIEDAKRAFRKICRDS-LAGWNAMM 551
           G +EDA    +K+  D   A W A++
Sbjct: 647 GRLEDAYEFIKKMPIDPDPAIWGALL 672


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/731 (31%), Positives = 371/731 (50%), Gaps = 22/731 (3%)

Query: 43  NRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQE 96
           N   IT     S +   C  G    AL   D ++   +  +  T+ +L++ C    +  E
Sbjct: 53  NPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASE 112

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              VH    K      V L +  +  + + G++V A   F    + D  ++  +V GY  
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
            G FD++  ++  M  +G+  + ++   VL   G   D+  G ++H   ++ GF S V  
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDV-- 230

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDL 267
            + NA++ +YV+CG    A  +FD +   D +SW+  I+         +G+  F + ++ 
Sbjct: 231 DVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF 290

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
             +   +   ++I+   ++G ER+   G+++  +  K GF+  VS+ N+LI M+   G  
Sbjct: 291 FVDPDLMTMTSVISACEALGDERL---GREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCW 347

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
           ++A  +F  + FKD VSW +MI+GY +NG   +A++ +  M    ++P+  T+AS+L A 
Sbjct: 348 DEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSAC 407

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +    L + + +H    ++G      + + LI  Y KC  ++++  V   I  KN +   
Sbjct: 408 AGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWT 467

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           ++   L       EAL  ++ +  S +  N  T   VL ACA +  L  GK IH  AL+ 
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILSLKP-NSVTLVSVLSACARIGALSCGKEIHAHALRT 526

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
               D F+ +A++DMY +CG +E A   F   C   +A WN ++ GYAQ G       LF
Sbjct: 527 GLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELF 585

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           +KM +  V PDEIT+ ++L +C  +G+V +   Y   M     + P L+HYA +VDLLGR
Sbjct: 586 HKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGR 645

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G LE A   I +MPI PD  IW +LL+AC IY N++LG LA   + E+   +   Y+LL
Sbjct: 646 AGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILL 705

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            NLYA +G W++V ++RK M+E  L  +PG SW+ V G  H F  GD  H Q KEI   L
Sbjct: 706 CNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVL 765

Query: 748 IKLYEHMVATA 758
              YE M AT 
Sbjct: 766 EGFYEKMEATG 776



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 272/566 (48%), Gaps = 23/566 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S + K    L   L   L+S F +F D   A+        RD+ ++N L+ G A+  
Sbjct: 115 RVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG 174

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL L+ R+ + G+RPD +TF  +++ CG L +      VH   ++ GF S V +V+
Sbjct: 175 YFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN 234

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G+I SA + F      D +++ AM+ GY  N    +   +F  MR   ++ 
Sbjct: 235 ALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDP 294

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++T+V+ A     D + G ++HG+ +K GF++ V   +NN+++ ++   G   +A  
Sbjct: 295 DLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS--VNNSLIQMHSSVGCWDEAEM 352

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGL-------FKDLRFNDFQINEYTMINLLSSVG 287
           +F ++   D+VSW+  I+    G E  GL       +  +       +E T+ ++LS+  
Sbjct: 353 VFSKMEFKDLVSWTAMIS----GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA 408

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
           G  +L  G  +  F  + G    V + N+LI MY KC  ++ A  +F  +  K+ +SW S
Sbjct: 409 GLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTS 468

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I G   N    +AL  F  M+  SL PN  T+ S+L A +   +L    ++H+H +++G
Sbjct: 469 IILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              D  + + L+  Y +C  +  +    +  + K+    N L +          A+EL+ 
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFH 586

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +  S    +  TF+ +L AC+    +  G +    +  K     ++   ++V+D+  + 
Sbjct: 587 KMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRA 646

Query: 527 GTIEDAKRAFRKICRDS-LAGWNAMM 551
           G +EDA    +K+  D   A W A++
Sbjct: 647 GRLEDAYEFIKKMPIDPDPAIWGALL 672


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/724 (31%), Positives = 382/724 (52%), Gaps = 25/724 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           RD  ++  +I+      Q+  A+ +F R++ +G+R DA TF +++KAC   G L +   +
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   ++ G   +  L +  +  Y   G + SA + F   ++ D V++ A +     +G+ 
Sbjct: 151 HAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEK-MERDLVSWNAAIAANAQSGDL 209

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
             + E+F  M+  G+     +L   L     +++ + IH    + G    +   ++ A+ 
Sbjct: 210 GIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLV--VSTALA 267

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEY 277
           + Y R G    A ++FD   E DVVSW+  + A A  G   EA  LF  +       ++ 
Sbjct: 268 SAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKV 327

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T++N   +  G   LR G+ I     + G    + +GNAL+ MY +CG   +AR +F   
Sbjct: 328 TLVN---ASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKR- 383

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           I  ++VSWN+MIAG S+ G   +A+++F  M    + P   T  ++LEAV+++    +AM
Sbjct: 384 IPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443

Query: 398 ----QVHSHIIKSGFLLDDSMISCLITTYGKCNALNES----KRVLSEIDKKNAVHINAL 449
               ++HS I+  G+  + ++ + ++  Y  C A++E+    +R   E D+ + V  NA+
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAME-DRHDVVSWNAI 502

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S L        AL  +R +       N  T   VL ACA    L +G+ +H     +  
Sbjct: 503 ISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGM 562

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           + ++FV +A+  MY +CG++E A+  F K+   RD +  +NAM+  Y+Q+G   E   LF
Sbjct: 563 ESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVI-FNAMIAAYSQNGLAGEALKLF 621

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + G +PDE ++++VL++C H GL  E       M   +G+ P  +HYAC VD+LGR
Sbjct: 622 WRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGR 681

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L  A+  I  M + P   +W++LL AC  Y ++D G LA S + EL P +ES YV+L
Sbjct: 682 AGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVL 741

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+ A AG W++  ++R EM+ + L KE G SWI +    H F AGD SH +S+EIY+EL
Sbjct: 742 SNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYREL 801

Query: 748 IKLY 751
            +L+
Sbjct: 802 ERLH 805



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 241/499 (48%), Gaps = 15/499 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ ++++G     +L+  L+  +        A   LF+   RD++++NA I+  A+   
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAM-LLFEKMERDLVSWNAAIAANAQSGD 208

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
            G AL+LF R++ +G+RP   T    +  C ++++ + +H +  + G    + + +    
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTALAS 268

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YA+ G +  A+  F    + D V++ AM+  Y  +G   ++  +F  M   G+  ++ +
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           L         ++ G  IHG  ++ G    +   L NA++++Y RCG   +A  +F  I  
Sbjct: 329 LVNASTGCSSLRFGRMIHGCALEKGLDRDIV--LGNALLDMYTRCGSPEEARHLFKRIP- 385

Query: 242 PDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE----RILRA 294
            + VSW+  IA +    +   A  LF+ ++         T +NLL +V       R +  
Sbjct: 386 CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS---VSWNSMIAG 351
           G+++ +     G+    +IG A++ MY  CG +++A + F     +D    VSWN++I+ 
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            S++G   +AL  F  M    + PN  T  ++L+A + + +L +   VH H+  SG   +
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESN 565

Query: 412 DSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIW 470
             + + L + YG+C +L  ++ +  ++  +++ V  NA+ +         EAL+L+  + 
Sbjct: 566 LFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625

Query: 471 GSCREVNGSTFSIVLKACA 489
                 +  +F  VL AC+
Sbjct: 626 QEGSRPDEQSFVSVLSACS 644



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 194/416 (46%), Gaps = 13/416 (3%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           ++ LL + G +R+L  G++I A    +G  E   +GN L+ +Y KC  + D   +F  L 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D  SW ++I  Y+E+G   +A+ MF  M +  +  +  T  ++L+A +    L Q   
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H+ I++SG      + + L+  YG C  +  S  +L E  +++ V  NA  +    +  
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVA-SAMLLFEKMERDLVSWNAAIAANAQSGD 208

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
              ALEL++ +          T  I L  CA    + Q +AIH +  ++  +Q + V +A
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTA 265

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +   Y + G +  AK  F +     +  WNAM+  YAQHG   E + LF +M   G+ P 
Sbjct: 266 LASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPS 325

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           ++T +   T C     +R  R    C  +  GL   +     ++D+  R G  E A+   
Sbjct: 326 KVTLVNASTGCSS---LRFGRMIHGCALE-KGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL-LELQPDNESTYVLLSNLYAS 693
            +  IP +A  W ++++  +  G +   +    ++ LE      +TY+ L    AS
Sbjct: 382 KR--IPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVAS 435



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 200/413 (48%), Gaps = 18/413 (4%)

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L  +L A+ D   + +G +IH   V +G    + NHL    + LY++C    D  ++F  
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELGNHL----LRLYLKCESLGDVEEVFSR 87

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   D  SW+  I A  +      A G+F  ++    + +  T + +L +      L  G
Sbjct: 88  LEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           + I A+  + G      + N L+ +YG CG V  A  +F+ +  +D VSWN+ IA  +++
Sbjct: 148 RSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQS 206

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G    AL++F  M    + P   T+   + A++   +++QA  +H  + +SG      + 
Sbjct: 207 GDLGIALELFQRMQLEGVRPARITL---VIALTVCATIRQAQAIHFIVRESGLEQTLVVS 263

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L + Y +   L ++K V     +++ V  NA+          +EA  L+  +      
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEG-- 321

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           ++ S  ++V  A    + L  G+ IH  AL+   D+DI + +A++DMY +CG+ E+A+  
Sbjct: 322 ISPSKVTLV-NASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           F++I  ++++ WN M+ G +Q G       LF +M   G+ P   TYL +L +
Sbjct: 381 FKRIPCNAVS-WNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/756 (30%), Positives = 378/756 (50%), Gaps = 14/756 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF--DTQNRDIITYNALISGLAR 58
           Q+++ +I N    D      ++  +     F    +  +  D++   I  +N++IS   R
Sbjct: 52  QVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVR 111

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYL 115
                 AL  + ++   G+ PD  TF  LVKAC +L+     E +      LG     ++
Sbjct: 112 MGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFV 171

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  I+ Y + G+I  A   F   L  D V +  M+ GY   G  D   + F  MR   +
Sbjct: 172 ASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQI 231

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  +   VL    +   +  G Q+HG  V  G        + N+++++Y +CG+  DA
Sbjct: 232 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGL--DFEGSIKNSLLSMYSKCGRFDDA 289

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +K+F  ++  D V+W+  I+         E+   F ++  +    +  T  +LL SV   
Sbjct: 290 IKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKF 349

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   +QI  +  +      + + +ALI  Y KC  V+ A+ IF      D V + +MI
Sbjct: 350 ENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMI 409

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY  NG    AL+MF  +++  + PN  T+ SIL  +    +LK   ++H  IIK GF 
Sbjct: 410 SGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFD 469

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
              ++   +I  Y KC  +N +  +   + K++ V  N++ +    +   + A++++R +
Sbjct: 470 NRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 529

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             S    +  + S  L ACA +     GKAIH   +K     D++ ES +IDMY KCG +
Sbjct: 530 GVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNL 589

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTS 588
           + A   F  +   ++  WN+++  Y  HG   +   LF++M  K G +PD+IT+L +++ 
Sbjct: 590 KAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISL 649

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           CCH G V E   +   M+  +G+ PQ EHYAC+VDL GR G L  A  T+  MP PPDA 
Sbjct: 650 CCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAG 709

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL A  ++ N++L  +A S+L++L P N   YVL+SN +A+ G W  V K+R  MK
Sbjct: 710 VWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMK 769

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           E+ + K PGYSWI +   TH F +GD +H +S  IY
Sbjct: 770 EREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIY 805



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 6/311 (1%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LL       +LR GKQ+ AF               ++ MY  CG  ++   +F  L  + 
Sbjct: 37  LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96

Query: 342 SV--SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           S    WNS+I+ +   G  NQAL  +  ML F + P+  T   +++A    K+ K    +
Sbjct: 97  SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
              +   G   ++ + S LI  Y +   ++ + ++   + +K+ V  N + +   YA C 
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLN--GYAKCG 214

Query: 460 A--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
           A    ++ +  +       N  TF  VL  CA+   ++ G  +H L + +  D +  +++
Sbjct: 215 ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKN 274

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           +++ MY KCG  +DA + FR + R     WN M+ GY Q G   E    F +M   GV P
Sbjct: 275 SLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLP 334

Query: 578 DEITYLAVLTS 588
           D IT+ ++L S
Sbjct: 335 DAITFSSLLPS 345



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 9/235 (3%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           ++ +L+  SN   L+Q  QVH+ +I +    D      ++  Y  C + +   ++   +D
Sbjct: 34  LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93

Query: 440 KK--NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
            +  +    N++ S  V      +AL  Y  +       + STF  ++KAC A+ + +  
Sbjct: 94  SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + +         D + FV S++I  Y + G I+ A + F ++ +     WN M+ GYA+ 
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G    V   F+ M    + P+ +T+  VL+ C        ++  +     LHGL+
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVC-------ASKLLIDLGVQLHGLV 261


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/609 (32%), Positives = 338/609 (55%), Gaps = 8/609 (1%)

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE---Q 197
           D + V++  ++ GYV + + D+  ++F  +   G ELN F  T +L     V+  E    
Sbjct: 3   DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           +H    K+G  S     +  A+++ Y  CG    A + FD I   D+VSW+  +A   + 
Sbjct: 63  LHACIYKLGHESNA--FVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 258 ---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               ++  LF ++R   F  N +T   +L +  G      GK +     K  +   + +G
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             L+ +Y K G  ND   +F+ +   D + W+ MI+ Y+++    +A+++F  M    ++
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN +T AS+L++ ++ ++L+   QVH H++K G   +  + + L+  Y KC  L+ S ++
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             E+  +N V  N +    V +    +AL LY+ +     + +  T+S VL+ACA++  +
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           E G  IH L+LK  YD+D+ V +A+IDMY KCG+I++A+  F  +       WNAM+ GY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           + HG   E    F  M +    P+++T++++L++C +AGL+   + Y   M   +G+ P 
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPC 480

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EHY C+V LLGR G L+ A   I+++P+ P+  +W++LL AC I+ ++DLG+++  ++L
Sbjct: 481 MEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL 540

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           ++ P +E+T+VLLSN+YA    WN V  +RK MK K + KEPG SWI   G  H+F  GD
Sbjct: 541 QIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600

Query: 735 SSHSQSKEI 743
           +SH   K I
Sbjct: 601 TSHPDMKMI 609



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 240/465 (51%), Gaps = 11/465 (2%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--- 99
           +R+ +++  LI G  +  Q    + LF R+  +G   + F F++++K   S++  E+   
Sbjct: 3   DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H    KLG  S  ++ +  I+ YA  G + SA   F      D V++T MV  Y  N  
Sbjct: 63  LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
           F  S ++F EMR +G   N F+   VL A   ++    G+ +HG  +K  +   +  ++ 
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL--YVG 180

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQ 273
             +++LY + G   D +++F+E+ + DV+ WS    R A +    EA  LF  +R     
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N++T  ++L S      L+ GKQ+     KVG    V + NAL+ +Y KCG+++++  +
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  L  ++ V+WN+MI GY ++G  ++AL ++ +MLE  +  +  T +S+L A ++  ++
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +   Q+HS  +K+ +  D  + + LI  Y KC ++  ++ V   + +++ +  NA+ S  
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                  EAL+ ++ +  +    N  TF  +L AC+    L+ G+
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 186/361 (51%), Gaps = 13/361 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K  + +D  +   L+  +TKF D     R   +    D+I ++ +IS  A+  Q
Sbjct: 164 VHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQ 223

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           S  A++LF ++R   + P+ FTF+S++++C S   LQ  + VH   LK+G    V++ + 
Sbjct: 224 SREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNA 283

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G + ++   F +  + + V +  M+ GYV +G+ DK+  ++  M    ++ +
Sbjct: 284 LMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQAS 343

Query: 179 EFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E + ++VL   AS    E G QIH   +K  +   V   + NA++++Y +CG   +A  +
Sbjct: 344 EVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVV--VGNALIDMYAKCGSIKNARLV 401

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD ++E D +SW+  I+  +  G+  EA   F+ ++  +   N+ T +++LS+     +L
Sbjct: 402 FDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLL 461

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIA 350
             G+   ++     G    +     ++ + G+ G ++ A  + + +  + +V  W +++ 
Sbjct: 462 DIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLG 521

Query: 351 G 351
            
Sbjct: 522 A 522



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 18/265 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G   +  +S  L+  + K      + +   +  NR+ +T+N +I G  +  
Sbjct: 264 QVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSG 323

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL L+  +    ++    T+SS+++AC SL   E+   +H + LK  +   V + +
Sbjct: 324 DGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGN 383

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I +A + F    + D +++ AM+ GY  +G   ++ + F  M+      
Sbjct: 384 ALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVP 443

Query: 178 NEFSLTAVLGAS-----FDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           N+ +  ++L A       D+ +      +  +G++       C      ++ L  R G  
Sbjct: 444 NKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE------PCMEHYTCMVWLLGRSGHL 497

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
             AVK+ +EI  EP+V  W   + A
Sbjct: 498 DKAVKLIEEIPLEPNVKVWRALLGA 522


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/742 (31%), Positives = 387/742 (52%), Gaps = 21/742 (2%)

Query: 31  FRRAFRFLFDTQNRDIITYNALISG----LARFCQSGPALKLFDRLRYQG-LRPDAFTFS 85
           F RA       +   I T++  ++     L RFC+SG        L   G    D  T  
Sbjct: 39  FNRASLRTVSDRADSITTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLC 98

Query: 86  SLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           S+++ C    SL++ + V       GF     L S     Y   G++  A   F      
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIE 158

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD----VKEGEQI 198
             + +  ++     +G+F  S  +F +M S G+E++ ++ + V   SF     V  GEQ+
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV-SKSFSSLRSVNGGEQL 217

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG 257
           HG+ +K GF  G  N + N+++  Y++  +   A K+FDE+TE DV+SW+  I     +G
Sbjct: 218 HGYILKSGF--GERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 258 VEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +   GL  F  + F+  +I+  T++++ +     R++  G+ +  F  K  F       N
Sbjct: 276 LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN 335

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
            L+ MY KCG ++ A+ +F  +  +  VS+ SMIAGY+  G   +A+ +F  M E  + P
Sbjct: 336 TLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           + YT+ ++L   + ++ L +  +VH  I ++    D  + + L+  Y KC ++ E++ V 
Sbjct: 396 DVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVF 455

Query: 436 SEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCR-EVNGSTFSIVLKACAAMTD 493
           SE+  K+ +  N +       +C+A EAL L+  +    R   +  T + VL ACA+++ 
Sbjct: 456 SEMRVKDIISWNTVIGGY-SKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            ++G+ IH   ++  Y  D  V ++++DMY KCG +  A+  F  I    L  W  M+ G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAG 574

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   E   LFN+M + G++PDEI+++++L +C H+GLV E   + + M     + P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            +EHYACIVD+L R G L  A   I+ MPIPPDA IW +LL  C I+ ++ L      K+
Sbjct: 635 TVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKV 694

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            EL+P+N   YVL++N+YA A  W +V +LRK + ++ L K PG SWI + G  + F AG
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 734 DSSHSQSKEIYKELIKLYEHMV 755
           DSS+ ++++I   L  +   M+
Sbjct: 755 DSSNPETEKIEAFLRGVRARMI 776



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 12/400 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G      +  +L++ + K      A +   +   RD+I++N++I+G     
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +   L +F ++ + G+  D  T  S+   C     +     VH   +K  FS      +
Sbjct: 276 LAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN 335

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++ SA++ FR+      V+YT+M+ GY   G   ++ ++F EM   G+  
Sbjct: 336 TLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++TAVL        + EG+++H + +K   + G    ++NA+M++Y +CG   +A  
Sbjct: 396 DVYTVTAVLNCCARNRLLDEGKRVHEW-IKENDM-GFDIFVSNALMDMYAKCGSMREAEL 453

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGER 290
           +F E+   D++SW+  I      C   EA  LF  L     F  +E T+  +L +     
Sbjct: 454 VFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLS 513

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G++I  +  + G+     + N+L+ MY KCG +  AR +FD +  KD VSW  MIA
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIA 573

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           GY  +GF  +A+ +F  M +  + P+  +  S+L A S+S
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHS 613



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 173/350 (49%), Gaps = 24/350 (6%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            TL+  ++K  D   A     +   R +++Y ++I+G AR   +G A+KLF+ +  +G+ 
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 79  PDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           PD +T ++++  C     L E + VH    +      +++ +  ++ YAK G +  AE+ 
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF----VEMRSLGLELNEFSLTAVLGA--- 188
           F +    D +++  ++ GY  N   +++  +F    VE R      +E ++  VL A   
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR---FSPDERTVACVLPACAS 511

Query: 189 --SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             +FD  +G +IHG+ ++ G+ S    H+ N+++++Y +CG  L A  +FD+IT  D+VS
Sbjct: 512 LSAFD--KGREIHGYIMRNGYFSD--RHVANSLVDMYAKCGALLLARLLFDDITSKDLVS 567

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFC 302
           W+  IA       G EA  LF  +R    + +E + ++LL +     ++  G +      
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMR 627

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMIAG 351
           ++      V     ++ M  + G ++ A R I +  I  D+  W +++ G
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCG 677


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/779 (29%), Positives = 407/779 (52%), Gaps = 31/779 (3%)

Query: 4   SLLIKNGHHLDP-ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           S L+    H  P +L  T  S     A        +F +Q+R    +  L+    R    
Sbjct: 19  SQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLL 78

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSG 118
             A+  +  +   G++PD + F +L+KA   LQ+ E+   +H    K G+    V + + 
Sbjct: 79  REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y K G+  +    F    + + V++ +++       +++ + E F  M    +E +
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198

Query: 179 EFSLTAVLGASFDVKE------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            F+L +V+ A  ++        G+Q+H +G++ G L+   + + N ++ +Y + G+   +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN---SFIINTLVAMYGKLGKLASS 255

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +       D+V+W+  +++ C     +EA    +++     + +E+T+ ++L +    
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315

Query: 290 RILRAGKQIQAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            +LR GK++ A+  K G ++  S +G+AL+ MY  C QV   R +FD +  +    WN+M
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375

Query: 349 IAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           IAGYS+N    +AL +F  M E + L+ N  TMA ++ A   S +  +   +H  ++K G
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              D  + + L+  Y +   ++ + R+  +++ ++ V  N + +  V++  H +AL L  
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495

Query: 468 TIWGSCREV-----------NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
            +    R+V           N  T   +L +CAA++ L +GK IH  A+K     D+ V 
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           SA++DMY KCG ++ +++ F +I + ++  WN ++M Y  HG   E  +L   M   GVK
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+E+T+++V  +C H+G+V E       M   +G+ P  +HYAC+VDLLGR G ++ A  
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675

Query: 637 TIDQMPIP-PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
            ++ MP     A  W SLL A  I+ N+++G +A   L++L+P+  S YVLL+N+Y+SAG
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +W+   ++R+ MKE+ + KEPG SWI  G   H F AGDSSH QS+++   L  L+E M
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 272/580 (46%), Gaps = 32/580 (5%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI++ + K G+ +D + ++ TL++ + K  DF   ++       R+ +++N+LIS L  F
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE------IVHGVCLKLGFSSRV 113
            +   AL+ F  +  + + P +FT  S+V AC +L   E       VH   L+ G     
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++++  +  Y K G++ S+++        D V +  ++     N +  ++ E   EM   
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E +EF++++VL A      ++ G+++H + +K G L    + + +A++++Y  C Q L
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYCNCKQVL 355

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSV 286
              ++FD + +  +  W+  IA         EA  LF  +  +     N  TM  ++ + 
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                    + I  F  K G      + N L+ MY + G+++ A  IF  +  +D V+WN
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475

Query: 347 SMIAGYSENGFFNQALDMFCHMLEF-----------SLIPNGYTMASILEAVSNSKSLKQ 395
           +MI GY  +     AL +   M              SL PN  T+ +IL + +   +L +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             ++H++ IK+    D ++ S L+  Y KC  L  S++V  +I +KN +  N +      
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                EA++L R +     + N  TF  V  AC+    +++G  I  + +K  Y  +   
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV-MKPDYGVEPSS 654

Query: 516 E--SAVIDMYCKCGTIEDAKRAFRKICRD--SLAGWNAMM 551
           +  + V+D+  + G I++A +    + RD      W++++
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/779 (29%), Positives = 407/779 (52%), Gaps = 31/779 (3%)

Query: 4   SLLIKNGHHLDP-ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           S L+    H  P +L  T  S     A        +F +Q+R    +  L+    R    
Sbjct: 19  SQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLL 78

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSG 118
             A+  +  +   G++PD + F +L+KA   LQ+ E+   +H    K G+    V + + 
Sbjct: 79  REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y K G+  +    F    + + V++ +++       +++ + E F  M    +E +
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198

Query: 179 EFSLTAVLGASFDVKE------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            F+L +V+ A  ++        G+Q+H +G++ G L+   + + N ++ +Y + G+   +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN---SFIINTLVAMYGKLGKLASS 255

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +       D+V+W+  +++ C     +EA    +++     + +E+T+ ++L +    
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315

Query: 290 RILRAGKQIQAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            +LR GK++ A+  K G ++  S +G+AL+ MY  C QV   R +FD +  +    WN+M
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375

Query: 349 IAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           IAGYS+N    +AL +F  M E + L+ N  TMA ++ A   S +  +   +H  ++K G
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              D  + + L+  Y +   ++ + R+  +++ ++ V  N + +  V++  H +AL L  
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495

Query: 468 TIWGSCREV-----------NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
            +    R+V           N  T   +L +CAA++ L +GK IH  A+K     D+ V 
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           SA++DMY KCG ++ +++ F +I + ++  WN ++M Y  HG   E  +L   M   GVK
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+E+T+++V  +C H+G+V E       M   +G+ P  +HYAC+VDLLGR G ++ A  
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675

Query: 637 TIDQMPIP-PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
            ++ MP     A  W SLL A  I+ N+++G +A   L++L+P+  S YVLL+N+Y+SAG
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +W+   ++R+ MKE+ + KEPG SWI  G   H F AGDSSH QS+++   L  L+E M
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 272/580 (46%), Gaps = 32/580 (5%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI++ + K G+ +D + ++ TL++ + K  DF   ++       R+ +++N+LIS L  F
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE------IVHGVCLKLGFSSRV 113
            +   AL+ F  +  + + P +FT  S+V AC +L   E       VH   L+ G     
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++++  +  Y K G++ S+++        D V +  ++     N +  ++ E   EM   
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E +EF++++VL A      ++ G+++H + +K G L    + + +A++++Y  C Q L
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYCNCKQVL 355

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSV 286
              ++FD + +  +  W+  IA         EA  LF  +  +     N  TM  ++ + 
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                    + I  F  K G      + N L+ MY + G+++ A  IF  +  +D V+WN
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475

Query: 347 SMIAGYSENGFFNQALDMFCHMLEF-----------SLIPNGYTMASILEAVSNSKSLKQ 395
           +MI GY  +     AL +   M              SL PN  T+ +IL + +   +L +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             ++H++ IK+    D ++ S L+  Y KC  L  S++V  +I +KN +  N +      
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                EA++L R +     + N  TF  V  AC+    +++G  I  + +K  Y  +   
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV-MKPDYGVEPSS 654

Query: 516 E--SAVIDMYCKCGTIEDAKRAFRKICRD--SLAGWNAMM 551
           +  + V+D+  + G I++A +    + RD      W++++
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/773 (30%), Positives = 386/773 (49%), Gaps = 23/773 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ LL K G      ++  LI+ +++      A R       RD I++N++I G      
Sbjct: 226 IHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGW 285

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
            G A+ LF ++  QG    + T  S++ AC  L    I   VHG  +K G    +  V  
Sbjct: 286 HGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQS 345

Query: 119 FIEN----------YAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVF 167
            I++          Y K G++ SA   F       NV  +  ++ GY   GEF++S  +F
Sbjct: 346 GIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLF 405

Query: 168 VEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           V+M  LG+  +E +++ +L     +   ++G   HG+ VK+GF  G    + NA+++ Y 
Sbjct: 406 VQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGF--GAQCAVCNALISFYA 463

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMIN 281
           +     DAV +F+ +   D +SW+  I+  + +G+  EA  LF  +     +++  T+++
Sbjct: 464 KSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLS 523

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L +    R   AG+ +  +  K G +   S+ NAL+ MY  C        IF  +  K+
Sbjct: 524 VLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKN 583

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSW +MI  Y   G F++   +   M+   + P+ + + S L A +  +SLKQ   VH 
Sbjct: 584 VVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHG 643

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           + I++G      + + L+  Y KC  + E++ +   +  K+ +  N L       +   E
Sbjct: 644 YTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNE 703

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           +  L+  +    R  N  T + +L A A+++ LE+G+ IH  AL+  + +D +  +A++D
Sbjct: 704 SFSLFSDMLLQFRP-NAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVD 762

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY KCG +  A+  F ++ + +L  W  M+ GY  HG       LF +M   G++PD  +
Sbjct: 763 MYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAAS 822

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           + A+L +CCH+GL  E R +   M   + + P+L+HY CIVDLL R G L+ A   I+ M
Sbjct: 823 FSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESM 882

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
           PI PD+ IW SLL  C I+ N+ L      K+ +L+P+N   YVLL+N+YA A  W  V 
Sbjct: 883 PIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVK 942

Query: 702 KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           KL+ ++  + L +  GYSWI V    H F A + +H     I + L  +   M
Sbjct: 943 KLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRM 995



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 161/654 (24%), Positives = 314/654 (48%), Gaps = 38/654 (5%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFD---TQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           +L   L+  + K  D   A R +FD    Q  D+  + +L+S  A+      A+ LF ++
Sbjct: 137 VLGKRLVLAYLKCGDLGEA-RTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQM 195

Query: 73  RYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           +  G+ PDA   S ++K   + GSL E E++HG+  KLG      + +  I  Y++ G +
Sbjct: 196 QCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRM 255

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
             A   F      D +++ +M+ G   NG    + ++F +M S G E++  ++ +VL A 
Sbjct: 256 EDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC 315

Query: 190 FDVKE---GEQIHGFGVKVGFLSGVCN--------HLNNAIMNLYVRCGQKLDAVKMFDE 238
             +     G+ +HG+ VK G L G+ +         L + ++ +YV+CG    A ++FD 
Sbjct: 316 AGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDA 375

Query: 239 I-TEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           + ++ +V  W+  +   A   +  E+  LF  +       +E+ +  LL  +      R 
Sbjct: 376 MSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARD 435

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G     +  K+GF    ++ NALIS Y K   + DA  +F+ +  +D++SWNS+I+G S 
Sbjct: 436 GLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSS 495

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG  ++A+++F  M       +  T+ S+L A + S+       VH + +K+G + + S+
Sbjct: 496 NGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSL 555

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y  C+    + ++   + +KN V   A+ +  + A        L+  + G  +
Sbjct: 556 ANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAG-------LFDKVAGLLQ 608

Query: 475 E-----VNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           E     +    F++   L A A    L+QGK++H   ++   ++ + V +A+++MY KC 
Sbjct: 609 EMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCR 668

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            +E+A+  F ++    +  WN ++ GY+++   +E  +LF+ M     +P+ +T   +L 
Sbjct: 669 NVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCILP 727

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +      +   R  +   +   G +        +VD+  + G L  A++  D++
Sbjct: 728 AAASISSLERGRE-IHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRL 780



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 226/543 (41%), Gaps = 57/543 (10%)

Query: 223 YVRCGQKLDAVKMFDEITE--PDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEY 277
           Y++CG   +A  +FD +     DV  W+  ++A   A D  EA  LF+ ++      + +
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            +  +L  V     L  G+ I     K+G  +  ++ NALI++Y +CG++ DA  +FD +
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM 265

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D++SWNSMI G   NG+   A+D+F  M       +  T+ S+L A +         
Sbjct: 266 HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGK 325

Query: 398 QVHSHIIKSGFL---------LDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHI- 446
            VH + +KSG L         +DD+ + S L+  Y KC  +  ++RV   +  K  VH+ 
Sbjct: 326 AVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVW 385

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N +           E+L L+  +       +    S +LK    ++    G   H   +K
Sbjct: 386 NLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVK 445

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             +     V +A+I  Y K   I DA   F ++ R     WN+++ G + +G   E   L
Sbjct: 446 LGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIEL 505

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F +M   G + D +T L+VL +C  +      R        +HG       Y+    L+G
Sbjct: 506 FIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRV-------VHG-------YSVKTGLIG 551

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
              L   A   +D      D   WQS                       +   N  ++  
Sbjct: 552 ETSL---ANALLDMYSNCSD---WQS----------------TNQIFRSMGQKNVVSWTA 589

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           +   Y  AG+++ V  L +EM    +  +     +       H +AGD S  Q K ++  
Sbjct: 590 MITSYMRAGLFDKVAGLLQEMVLDGIRPD-----VFAVTSALHAFAGDESLKQGKSVHGY 644

Query: 747 LIK 749
            I+
Sbjct: 645 TIR 647


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/635 (31%), Positives = 339/635 (53%), Gaps = 9/635 (1%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELN 178
           ++N  K+G + +A   F   L  D +++T ++ GYV      ++  +F +M    GL ++
Sbjct: 8   LKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMD 67

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F L+  L   G +  V  GE +HG+ VK  F++ V   + +A++++Y++ G+  +   +
Sbjct: 68  PFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSV--FVGSALVDMYMKIGKVDEGCIV 125

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E+   +VVSW+  IA    A    EA   F D+       + YT  + L +      L
Sbjct: 126 FKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGAL 185

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G++I     K GF  V  + N L +MY KCG+++    +F+ +  +D VSW ++I   
Sbjct: 186 NYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSN 245

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G    A+  F  M E  + PN +T A+++   +    ++   Q+H+H+I+ G +   
Sbjct: 246 VQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSL 305

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + ++  Y KC  L+ +  V   + +++ +  + + S      C  EA +    +   
Sbjct: 306 SVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRRE 365

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               N   F+ VL  C  M  LEQGK +H   L    +Q+  V+SA+I+MY KCG+I++A
Sbjct: 366 GPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA 425

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F +   +++  W AM+ GYA+HG   E  +LF K+ K G++PD +T++AVL +C HA
Sbjct: 426 SKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHA 485

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GLV     Y + +S +H + P  +HY C++DLL R G L  A+  I  MP   D  +W +
Sbjct: 486 GLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWST 545

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL AC I+G++D G  A  K+L+L P+   T++ L+N+YA+ G W +  ++RK MK K +
Sbjct: 546 LLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGV 605

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            KEPG+SWI        F +GD SH + + IY  L
Sbjct: 606 VKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVL 640



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 265/544 (48%), Gaps = 31/544 (5%)

Query: 36  RFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACG- 92
           R LFD    RD I++  +ISG      +  AL LF ++  + GL  D F  S  +KACG 
Sbjct: 21  RQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGL 80

Query: 93  --SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
             S+   E +HG  +K  F + V++ S  ++ Y K G++    + F++    + V++TA+
Sbjct: 81  NMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAI 140

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           + G V  G   ++   F +M    +  + ++ ++ L A  D   +  G +IH   +K GF
Sbjct: 141 IAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGF 200

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVE--AFGLF 264
            +   + + N +  +Y +CG+    +++F+ +T+ DVVSW+  I +    G E  A   F
Sbjct: 201 TA--VSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAF 258

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + +R  D   NE+T   ++S       +  G+Q+ A   + G ++ +S+ N++++MY KC
Sbjct: 259 RRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKC 318

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
            Q++ A ++F  L  +D +SW++MI+GY++ G   +A D    M      PN +  AS+L
Sbjct: 319 WQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVL 378

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               N   L+Q  Q+H+H++  G   +  + S LI  Y KC ++ E+ ++  E +  N V
Sbjct: 379 SVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIV 438

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDL------EQ 496
              A+ +         EA++L++ +       +  TF  VL AC  A + DL        
Sbjct: 439 SWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSL 498

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGY 554
            K       K  Y         +ID+ C+ G + DA+   + +   RD +  W+ ++   
Sbjct: 499 SKVHQICPSKDHY-------GCMIDLLCRAGRLNDAESMIQSMPFQRDDVV-WSTLLRAC 550

Query: 555 AQHG 558
             HG
Sbjct: 551 RIHG 554



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/535 (22%), Positives = 248/535 (46%), Gaps = 49/535 (9%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND-F 272
           N ++   V+ G   +A ++FD++ + D +SW+  I+   +G+   EA  LF  +      
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
            ++ + +   L + G    +  G+ +  +  K  F+  V +G+AL+ MY K G+V++   
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  +  ++ VSW ++IAG    G+  +AL  F  M    +  + YT +S L+A ++S +
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L    ++H   +K GF     + + L T Y KC  L+   R+   + +++ V    +   
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V       A++ +R +  +    N  TF+ V+  CA +  +E G+ +H   ++      
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V ++++ MY KC  ++ A   F+ + R  +  W+ M+ GYAQ GC  E  +  + M +
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREAR---TYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
            G +P+E  + +VL+ C +  ++ + +    ++ C+    GL       + ++++  + G
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCV----GLEQNTMVQSALINMYSKCG 420

Query: 630 LLEGAKMTIDQ-------------------------------MP---IPPDAHIWQSLLS 655
            ++ A    D+                               +P   + PD+  + ++L+
Sbjct: 421 SIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLA 480

Query: 656 ACTIYGNIDLGLL---AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           AC+  G +DLG     + SK+ ++ P  +  Y  + +L   AG  ND   + + M
Sbjct: 481 ACSHAGLVDLGFHYFNSLSKVHQICPSKDH-YGCMIDLLCRAGRLNDAESMIQSM 534



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 170/365 (46%), Gaps = 23/365 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+   +K G      ++ TL + + K        R       RD++++  +I    +  
Sbjct: 190 EIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIG 249

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   A+K F R+R   + P+ FTF++++  C   G ++  E +H   ++ G    + + +
Sbjct: 250 QEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVAN 309

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+K  ++  A   F+     D ++++ M+ GY   G  +++ +    MR  G   
Sbjct: 310 SIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRP 369

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NEF+  +VL   G    +++G+Q+H   + VG        + +A++N+Y +CG   +A K
Sbjct: 370 NEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTM--VQSALINMYSKCGSIKEASK 427

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE    ++VSW+  I    +     EA  LFK L     + +  T I +L++     +
Sbjct: 428 IFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGL 487

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDARSIFDYLIF-KDSVS 344
           +  G     F Y     +V  I  +      +I +  + G++NDA S+   + F +D V 
Sbjct: 488 VDLG-----FHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVV 542

Query: 345 WNSMI 349
           W++++
Sbjct: 543 WSTLL 547



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 1/186 (0%)

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW-GSC 473
           I+ ++    K   LN ++++  ++ +++ +    + S  V      EAL L+  +W    
Sbjct: 4   INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
             ++    S+ LKAC     +  G+++H  ++K  +   +FV SA++DMY K G +++  
Sbjct: 64  LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F+++   ++  W A++ G  + G   E    F+ M    V  D  T+ + L +C  +G
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183

Query: 594 LVREAR 599
            +   R
Sbjct: 184 ALNYGR 189


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/604 (35%), Positives = 343/604 (56%), Gaps = 18/604 (2%)

Query: 161 DKSKE---VFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNH 214
           D++KE   +F+ +R  G   +  SL+ VL   G  FD   G+Q+H   +K GF+  V   
Sbjct: 71  DQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVS-- 128

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFND 271
           +  +++++Y++     D  ++FDE+   +VVSW+  +A    +G+  +A  LF  ++   
Sbjct: 129 VGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEG 188

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + N +T   +L  +  +  +  G Q+     K G    + +GN++++MY K   V+DA+
Sbjct: 189 IKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           ++FD +  +++VSWNSMIAG+  NG   +A ++F  M    +       A++++  +N K
Sbjct: 249 AVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIK 308

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK-KNAVHINALA 450
            +  A Q+H  +IK+G   D ++ + L+  Y KC+ ++++ ++   +   +N V   A+ 
Sbjct: 309 EMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAII 368

Query: 451 SVLVYASCHAEALELY---RTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLALK 506
           S  V       A+ L+   R   G   E N  TFS VL ACAA T  +EQGK  H  ++K
Sbjct: 369 SGYVQNGRTDRAMNLFCQMRREEGV--EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 426

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
           + +   + V SA++ MY K G IE A   F++     L  WN+M+ GYAQHGC  +   +
Sbjct: 427 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKI 486

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F +M    ++ D IT++ V+++C HAGLV E + Y   M   + ++P +EHY+C+VDL  
Sbjct: 487 FEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYS 546

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R G+LE A   I++MP P  A IW++LL+AC ++ N+ LG LA  KL+ LQP + + YVL
Sbjct: 547 RAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVL 606

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           LSN+YA+AG W +  K+RK M  K + KE GYSWI V   T  F AGD SH QS  IY +
Sbjct: 607 LSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLK 666

Query: 747 LIKL 750
           L +L
Sbjct: 667 LEEL 670



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 259/516 (50%), Gaps = 16/516 (3%)

Query: 38  LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD T  + +   N L+   +R  Q+  AL LF  LR  G   D  + S ++K CG L +
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 97  NEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
             +   VH  C+K GF   V + +  ++ Y K+  +   E  F +    + V++T+++ G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSG 210
           Y  NG  +++ ++F +M+  G++ N F+  AVLG   A   V++G Q+H   +K G  S 
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDL 267
           +   + N+++N+Y +     DA  +FD +   + VSW+  IA    +G  +EAF LF  +
Sbjct: 228 I--FVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           R    ++ +     ++      + +   KQ+     K G    ++I  AL+  Y KC ++
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345

Query: 328 NDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLIPNGYTMASILE 385
           +DA  +F  +   ++ VSW ++I+GY +NG  ++A+++FC M  E  + PN +T +S+L 
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLN 405

Query: 386 A-VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           A  + + S++Q  Q HS  IKSGF     + S L+T Y K   +  +  V      ++ V
Sbjct: 406 ACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLV 465

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             N++ S      C  ++L+++  +     E++G TF  V+ AC     + +G+    L 
Sbjct: 466 SWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLM 525

Query: 505 LKARYDQDIFVE-SAVIDMYCKCGTIEDAKRAFRKI 539
           +K  +        S ++D+Y + G +E A     K+
Sbjct: 526 VKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 244/487 (50%), Gaps = 34/487 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   IK G   D  + T+L+  + K        R   + + ++++++ +L++G  +  
Sbjct: 113 QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNG 172

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
            +  ALKLF +++ +G++P+ FTF+++   + A G++++   VH + +K G  S +++ +
Sbjct: 173 LNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGN 232

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+KS  +  A+  F    + + V++ +M+ G+V NG   ++ E+F  MR  G++L
Sbjct: 233 SMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +     V+    ++KE    +Q+H   +K G  S    ++  A+M  Y +C +  DA K
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNG--SDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 235 MFDEITE-PDVVSWSERIAAACDG---VEAFGLFKDLRFND-FQINEYTMINLLSSVGGE 289
           +F  +    +VVSW+  I+          A  LF  +R  +  + NE+T  ++L++    
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAP 410

Query: 290 RI-LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  GKQ  +   K GF   + + +AL++MY K G +  A  +F   + +D VSWNSM
Sbjct: 411 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSM 470

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GY+++G   ++L +F  M   +L  +G T   ++ A +++  + +  +    ++K   
Sbjct: 471 ISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYH 530

Query: 409 LLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           ++      SC++  Y +   L ++      +D  N +   A A++             +R
Sbjct: 531 IVPTMEHYSCMVDLYSRAGMLEKA------MDLINKMPFPAGATI-------------WR 571

Query: 468 TIWGSCR 474
           T+  +CR
Sbjct: 572 TLLAACR 578



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 3/235 (1%)

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S+++  E  ++     N L         + EAL L+  +  S    +GS+ S VLK C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + D   GK +HC  +K  + +D+ V ++++DMY K  ++ED +R F ++   ++  W ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + GY Q+G   +   LF++M   G+KP+  T+ AVL      G V E    +  M    G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAV-EKGVQVHTMVIKSG 223

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           L   +     +V++  +  ++  AK   D M    +A  W S+++     G +DL
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG-LDL 276


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 214/706 (30%), Positives = 383/706 (54%), Gaps = 30/706 (4%)

Query: 76  GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVS 131
           G++PD + F +L+KA   LQ+ E+   +H    K G+    V + +  +  Y K G+  +
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
               F    + + V++ +++       +++ + E F  M    +E + F+L +V+ A  +
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 192 VKE------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
           +        G+Q+H +G++ G L+   + + N ++ +Y + G+   +  +       D+V
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGELN---SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 181

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +W+  +++ C     +EA    +++     + +E+T+ ++L +     +LR GK++ A+ 
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241

Query: 303 YKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
            K G ++  S +G+AL+ MY  C QV   R +FD +  +    WN+MIAGYS+N    +A
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 301

Query: 362 LDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           L +F  M E + L+ N  TMA ++ A   S +  +   +H  ++K G   D  + + L+ 
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV---- 476
            Y +   ++ + R+  +++ ++ V  N + +  V++  H +AL L   +    R+V    
Sbjct: 362 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 421

Query: 477 -------NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  N  T   +L +CAA++ L +GK IH  A+K     D+ V SA++DMY KCG +
Sbjct: 422 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 481

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + +++ F +I + ++  WN ++M Y  HG   E  +L   M   GVKP+E+T+++V  +C
Sbjct: 482 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 541

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP-PDAH 648
            H+G+V E       M   +G+ P  +HYAC+VDLLGR G ++ A   ++ MP     A 
Sbjct: 542 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 601

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W SLL A  I+ N+++G +A   L++L+P+  S YVLL+N+Y+SAG+W+   ++R+ MK
Sbjct: 602 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 661

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           E+ + KEPG SWI  G   H F AGDSSH QS+++   L  L+E M
Sbjct: 662 EQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 707



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 271/580 (46%), Gaps = 32/580 (5%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI++ + K G+ +D + ++ TL++ + K  DF   ++       R+ +++N+LIS L  F
Sbjct: 31  QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 90

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE------IVHGVCLKLGFSSRV 113
            +   AL+ F  +  + + P +FT  S+V AC +L   E       VH   L+ G     
Sbjct: 91  EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 149

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++++  +  Y K G++ S+++        D V +  ++     N +  ++ E   EM   
Sbjct: 150 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 209

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E +EF++++VL A      ++ G+++H + +K G L    + + +A++++Y  C Q L
Sbjct: 210 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYCNCKQVL 268

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSV 286
              ++FD + +  +  W+  IA         EA  LF  +  +     N  TM  ++ + 
Sbjct: 269 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 328

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                    + I  F  K G      + N L+ MY + G+++ A  IF  +  +D V+WN
Sbjct: 329 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 388

Query: 347 SMIAGYSENGFFNQALDMFCHMLEF-----------SLIPNGYTMASILEAVSNSKSLKQ 395
           +MI GY  +     AL +   M              SL PN  T+ +IL + +   +L +
Sbjct: 389 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 448

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             ++H++ IK+    D ++ S L+  Y KC  L  S++V  +I +KN +  N +      
Sbjct: 449 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 508

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                EA++L R +     + N  TF  V  AC+    +++G  I    +K  Y  +   
Sbjct: 509 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSS 567

Query: 516 E--SAVIDMYCKCGTIEDAKRAFRKICRD--SLAGWNAMM 551
           +  + V+D+  + G I++A +    + RD      W++++
Sbjct: 568 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 5/236 (2%)

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCN 426
           M+   + P+ Y   ++L+AV++ + ++   Q+H+H+ K G+ +D  ++ + L+  Y KC 
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
                 +V   I ++N V  N+L S L        ALE +R +     E +  T   V+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 487 ACAAMT---DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           AC+ +     L  GK +H   L+ + + + F+ + ++ MY K G +  +K          
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
           L  WN ++    Q+    E      +M   GV+PDE T  +VL +C H  ++R  +
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 235


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 205/631 (32%), Positives = 345/631 (54%), Gaps = 8/631 (1%)

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--- 188
           AE  F    + + V++ A++ GY   G+  K  ++F +M+    + ++F+L+ VL     
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +  ++EG+ +H   ++ G    +   L  +++++Y +CG   DA+K+F +I  PDVV+WS
Sbjct: 64  TGSLREGKVLHALALRSG--CEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWS 121

Query: 249 ERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I        G EA  LF  +R    + N++T+ +L+S+      LR G+ I     K 
Sbjct: 122 AMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKY 181

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           GF     + N LI MY K   V D   +F+ +   D VSWN++++G+ ++    +   +F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             ML     PN +T  S+L + S+    +   QVH+HIIK+    DD + + L+  Y K 
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             L ++      +  ++      + S         +A++ +R +     + N  T +  L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
             C+ M  LE G+ +H +A+KA +  DIFV SA++D+Y KCG +E A+  F+ +    + 
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN ++ GY+QHG   +    F  M   G+ PDE T++ VL++C   GLV E +     M
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSM 481

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           S ++G+ P +EHYAC+VD+LGR G     K+ I++M + P + IW+++L AC ++GN+D 
Sbjct: 482 SKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDF 541

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G  A  KL E++P  +S+Y+LLSN++AS G W+DV  +R  M  + + KEPG SW+ V G
Sbjct: 542 GEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDG 601

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
             H F + D SH + +EIY +L KL + +++
Sbjct: 602 QVHVFLSQDGSHPKIREIYAKLDKLGQSLMS 632



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 239/474 (50%), Gaps = 11/474 (2%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-- 91
           A R  F    ++ +++NAL++G A+       LKLF +++    +   FT S+++K C  
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 92  -GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
            GSL+E +++H + L+ G     +L    ++ Y+K G +  A   F    + D VA++AM
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGF 207
           + G    G   ++ E+F  MR  G   N+F+L++++  +    D++ G+ IHG   K GF
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLF 264
            S   N ++N ++ +Y++     D  K+F+ +T PD+VSW+  ++   D         +F
Sbjct: 184 ESD--NLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
             +    F+ N +T I++L S         GKQ+ A   K    +   +G AL+ MY K 
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             + DA   FD L+ +D  SW  +I+GY++     +A+  F  M    + PN YT+AS L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
              S+  +L+   Q+H+  +K+G   D  + S L+  YGKC  +  ++ +   +  ++ V
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             N + S         +ALE +R +       + +TF  VL AC+ M  +E+GK
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK 475



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 276/605 (45%), Gaps = 62/605 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L +++G  +D  L  +L+  ++K      A +     +N D++ ++A+I+GL +   
Sbjct: 73  LHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGH 132

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
              A +LF  +R +G RP+ FT SSLV      G L+  + +HG   K GF S   + + 
Sbjct: 133 GQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNP 192

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y KS  +      F    + D V++ A++ G+  +    +   +F +M   G + N
Sbjct: 193 LIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPN 252

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+  +VL    +  D + G+Q+H   +K    S   + +  A++++Y +     DA   
Sbjct: 253 MFTFISVLRSCSSLLDPEFGKQVHAHIIKNS--SDDDDFVGTALVDMYAKARCLEDAGVA 310

Query: 236 FDEITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD +   D+ SW+  I+  A  D  E A   F+ ++    + NEYT+ + LS       L
Sbjct: 311 FDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATL 370

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+Q+ A   K G    + +G+AL+ +YGKCG +  A +IF  LI +D VSWN++I+GY
Sbjct: 371 ENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGY 430

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLD 411
           S++G   +AL+ F  ML   ++P+  T   +L A S    +++  +    + K  G    
Sbjct: 431 SQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPS 490

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
               +C++   G+    NE K  + E++                       L  Y  IW 
Sbjct: 491 IEHYACMVDILGRAGKFNEVKIFIEEMN-----------------------LTPYSLIW- 526

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI---DMYCKCGT 528
                       VL AC    +++ G+     A K  ++ +  ++S+ I   +++   G 
Sbjct: 527 ----------ETVLGACKLHGNVDFGEK----AAKKLFEMEPMMDSSYILLSNIFASKGR 572

Query: 529 IEDAK--RAF---RKICRDSLAGW----NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
            +D +  RA    R I ++    W      + +  +Q G + ++  ++ K+ K G     
Sbjct: 573 WDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMS 632

Query: 580 ITYLA 584
           I Y+ 
Sbjct: 633 IGYVP 637



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++++ +K GH  D  + + L+  + K      A        +RDI+++N +ISG ++  
Sbjct: 375 QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHG 434

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   AL+ F  +  +G+ PD  TF  ++ AC   G ++E +       +    S++Y ++
Sbjct: 435 QGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK------KRFDSMSKIYGIN 488

Query: 118 GFIENYA 124
             IE+YA
Sbjct: 489 PSIEHYA 495



 Score = 45.8 bits (107), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E A+R F  +   +   WNA++ GYAQ G   +V  LF KM +   K  + T   VL  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQL-----EHYAC-IVDLLGRVGLLEGAKMTIDQMP 642
           C + G +RE +        LH L  +      E   C +VD+  + G +  A     ++ 
Sbjct: 61  CANTGSLREGKV-------LHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR 113

Query: 643 IPPDAHIWQSLLSACTIYGN 662
             PD   W ++++     G+
Sbjct: 114 -NPDVVAWSAMITGLDQQGH 132


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 225/678 (33%), Positives = 370/678 (54%), Gaps = 36/678 (5%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSG-FIENYAKSGEIVSAEMCFRDCLDL-DNVAYTA 149
           G L+    +H   L+     R  +V+   +  Y++ G + SA   F     L D V++TA
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD--------VKEGEQIHGF 201
           M      NG   +S  +  EM   GL  N ++L AV  A F               +H  
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV--- 258
           G     L G    + +A++++  R G    A K+FD + E  VV W+  I+    G    
Sbjct: 182 G-----LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAE 236

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  +F D   + F+ + YTM +++S+      +R G Q+ +   ++GF     +   L+
Sbjct: 237 EAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLV 296

Query: 319 SMYGKCG--QVND-ARSIFDYLIFKDSVSWNSMIAGYSENGFF-NQALDMFCHMLEFSLI 374
            MY K    Q  D A  +F+ +   D +SW ++I+GY ++G   N+ + +F  ML  S+ 
Sbjct: 297 DMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIK 356

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN  T +SIL+A +N        QVH+H+IKS      ++ + L++ Y +   + E++RV
Sbjct: 357 PNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRV 416

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALE--LYRTIWGSCREVNGSTFSIVLKACAAMT 492
            +++ +++ +            SC  E  +  L   I      ++ STF+ ++ A A++ 
Sbjct: 417 FNQLYERSMI------------SCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVG 464

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L +G+ +H + LKA +  D FV ++++ MY +CG +EDA R+F ++   ++  W +M+ 
Sbjct: 465 MLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMIS 524

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G A+HG      +LF+ M   GVKP+++TY+AVL++C H GLVRE + Y   M   HGLI
Sbjct: 525 GLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLI 584

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P++EHYAC+VDLL R GL++ A   I++MP+  DA +W++LL AC  + NI++G +A   
Sbjct: 585 PRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKN 644

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           ++EL+P + + YVLLSNLYA AG+W++V ++R  M++  L KE G SW+ V   TH F A
Sbjct: 645 VIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRA 704

Query: 733 GDSSHSQSKEIYKELIKL 750
           GD+SH ++++IY +L  L
Sbjct: 705 GDTSHPRAQDIYGKLDTL 722



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 252/502 (50%), Gaps = 30/502 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARFCQSGPALKLFDR 71
           D +++ +L++ +++      A R +FD     RDI+++ A+ S LAR      +L L   
Sbjct: 83  DAVVANSLLTLYSRCGAVASA-RNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGE 141

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQ----ENEIVHGVCLKLG-FSSRVYLVSGFIENYAKS 126
           +   GL P+A+T  ++  AC   +       +V G+  K+G + + + + S  I+  A++
Sbjct: 142 MLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARN 201

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G++ SA   F   ++   V +T ++  YV     +++ E+F++    G E + +++++++
Sbjct: 202 GDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMI 261

Query: 187 GASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLD-AVKMFDEIT 240
            A  +   V+ G Q+H   +++GF S  C  ++  ++++Y +    Q +D A K+F+ + 
Sbjct: 262 SACTELGSVRLGLQLHSLALRMGFASDAC--VSCGLVDMYAKSNIEQAMDYANKVFERMR 319

Query: 241 EPDVVSWSERIAAACD-GVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           + DV+SW+  I+     GV+      LF ++     + N  T  ++L +        +G+
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGR 379

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           Q+ A   K       ++GNAL+SMY + G + +AR +F+ L  +      SMI+  +E  
Sbjct: 380 QVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER------SMISCITEG- 432

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
             +  LD     ++  +  +  T AS++ A ++   L +  Q+H+  +K+GF  D  + +
Sbjct: 433 -RDAPLDHRIGRMDMGI--SSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSN 489

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ Y +C  L ++ R  +E+  +N +   ++ S L        AL L+  +  +  + 
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549

Query: 477 NGSTFSIVLKACAAMTDLEQGK 498
           N  T+  VL AC+ +  + +GK
Sbjct: 550 NDVTYIAVLSACSHVGLVREGK 571



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++ +IK+       +   L+S + +     + RR F  L++      IT         
Sbjct: 380 QVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT--------- 430

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
                G    L  R+    +   + TF+SL+ A  S   L + + +H + LK GF S  +
Sbjct: 431 ----EGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRF 486

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y++ G +  A   F +  D + +++T+M+ G   +G  +++  +F +M   G
Sbjct: 487 VSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTG 546

Query: 175 LELNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           ++ N+ +  AVL A      V+EG E         G +  + ++    +++L  R G   
Sbjct: 547 VKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA--CMVDLLARSGLVK 604

Query: 231 DAVKMFDEIT-EPDVVSWSERIAA 253
           +A++  +E+  + D + W   + A
Sbjct: 605 EALEFINEMPLKADALVWKTLLGA 628


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 203/607 (33%), Positives = 317/607 (52%), Gaps = 69/607 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N +++ Y + G    + + FD + + D VSW+  I    +  +   A  +  ++     +
Sbjct: 84  NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +++T+ N+L+SV   R L  GK++ +F  K+G    VS+ N+L++MY KCG    A+ +
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203

Query: 334 FDYLIFKDS-------------------------------VSWNSMIAGYSENGFFNQAL 362
           FD ++ KD                                V+WNSMI+GY++ G+  +AL
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRAL 263

Query: 363 DMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           DMF  ML  S++ P+ +T+AS+L A +N + L    Q+HSHI+ +GF +   +++ LI+ 
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISM 323

Query: 422 YGKCNA---------------------------------LNESKRVLSEIDKKNAVHINA 448
           Y +C                                   +NE+K +   +  ++ V   A
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTA 383

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +         + EA+ L+R++ G  +  N  T + +L   +++  L  GK IH  A+K+ 
Sbjct: 384 MIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG 443

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
               + V +A+I MY K G+I  A RAF  I C      W +M++  AQHG   E   LF
Sbjct: 444 EIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M   G++PD ITY+ V ++C HAGLV + R Y   M D+  +IP L HYAC+VDL GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            GLL+ A+  I++MPI PD   W SLLSAC +Y NIDLG +A  +LL L+P+N   Y  L
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSAL 623

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +NLY++ G W +  K+RK MK+  + KE G+SWI V    H F   D  H Q  EIY  +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITM 683

Query: 748 IKLYEHM 754
            K+++ +
Sbjct: 684 KKIWDEI 690



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 256/591 (43%), Gaps = 122/591 (20%)

Query: 79  PDAFTFSSLVKACGSLQEN-----------EIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           P   + S+L++ C +L +            ++VH   +K G    VYL++  +  Y+K+G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 128 EIVSA-----EMCFRDCLDL--------------------------DNVAYTAMVCGYVW 156
             + A     EM  R                               D+V++T M+ GY  
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
            G++ K+  +  EM   G+E ++F+LT VL    A+  ++ G+++H F VK+G    V  
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVS- 182

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA------------------AAC 255
            ++N+++N+Y +CG  + A  +FD +   D+ SW+  IA                  A  
Sbjct: 183 -VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241

Query: 256 DGV----------------EAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
           D V                 A  +F K LR +    + +T+ ++LS+      L  G+QI
Sbjct: 242 DIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQI 301

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQV------------------------------- 327
            +     GF     + NALISMY +CG V                               
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361

Query: 328 --NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
             N+A++IFD L  +D V+W +MI GY ++G + +A+++F  M+     PN YT+A++L 
Sbjct: 362 DMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLS 421

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAV 444
             S+  SL    Q+H   +KSG +   S+ + LIT Y K  ++  + R    I  +++ V
Sbjct: 422 VASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTV 481

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              ++   L       EALEL+ T+       +  T+  V  AC     + QG+      
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR--QYFD 539

Query: 505 LKARYDQDIFVES---AVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           +    D+ I   S    ++D++ + G +++A+    K+     +  W +++
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 157/659 (23%), Positives = 280/659 (42%), Gaps = 135/659 (20%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           T++S + K  D   +  F      RD +++  +I G     Q   A+++   +  +G+ P
Sbjct: 85  TVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEP 144

Query: 80  DAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
             FT +++   V A   L+  + VH   +KLG    V + +  +  YAK G+ + A++ F
Sbjct: 145 SQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVF 204

Query: 137 -----RDC---------------LDL-----------DNVAYTAMVCGYVWNGEFDKSKE 165
                +D                +DL           D V + +M+ GY   G   ++ +
Sbjct: 205 DRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALD 264

Query: 166 VFVEM-RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNAIM 220
           +F +M R   L  + F+L +VL A  ++++   GEQIH   V  GF +SG+   + NA++
Sbjct: 265 MFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGI---VLNALI 321

Query: 221 NLYVRCG-----QKL----------------------------DAVKMFDEITEPDVVSW 247
           ++Y RCG     ++L                            +A  +FD + + DVV+W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAW 381

Query: 248 SERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I      G+  EA  LF+ +   + + N YT+  +LS       L  GKQI     K
Sbjct: 382 TAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALD 363
            G +  VS+ NALI+MY K G +  A   FD +   +D+VSW SMI   +++G   +AL+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTY 422
           +F  ML   L P+  T   +  A +++  + Q  Q    +     ++   S  +C++  +
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           G+   L E++  + ++                        +E     WGS          
Sbjct: 562 GRAGLLQEAQEFIEKM-----------------------PIEPDVVTWGS---------- 588

Query: 483 IVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
            +L AC    +++ GK A   L L    +   +  SA+ ++Y  CG  E+A +  RK  +
Sbjct: 589 -LLSACRVYKNIDLGKVAAERLLLLEPENSGAY--SALANLYSACGKWEEAAK-IRKSMK 644

Query: 542 DSLA----GWNAMMMGYAQHG-------------CYHEVSNLFNKMSKFGVKPDEITYL 583
           D       G++ + + +  H               Y  +  +++++ K G  PD  + L
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVL 703



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 11/244 (4%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           T L+  + K  D   A       ++RD++ + A+I G  +    G A+ LF  +  +  R
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQR 410

Query: 79  PDAFTFS---SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P+++T +   S+  +  SL   + +HG  +K G    V + +  I  YAK+G I SA   
Sbjct: 411 PNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRA 470

Query: 136 FRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-- 191
           F D +  + D V++T+M+     +G  +++ E+F  M   GL  +  +   V  A     
Sbjct: 471 F-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529

Query: 192 -VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSE 249
            V +G Q       V  +    +H    +++L+ R G   +A +  +++  EPDVV+W  
Sbjct: 530 LVNQGRQYFDMMKDVDKIIPTLSHY-ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588

Query: 250 RIAA 253
            ++A
Sbjct: 589 LLSA 592



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 115/288 (39%), Gaps = 71/288 (24%)

Query: 375 PNGYTMASILEAVSN--SKSLKQ------AMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           P   +++++LE  +N   KS+ +      A  VH  +IKSG +    +++ L+  Y K  
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVY-----ASC----------------------- 458
               ++++  E+  + A   N + S         +SC                       
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 459 ---HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
              + +A+ +   +     E +  T + VL + AA   LE GK +H   +K     ++ V
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183

Query: 516 ESAVIDMYCKCGTIEDAKRAF-RKICRD------------------------------SL 544
            +++++MY KCG    AK  F R + +D                               +
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCH 591
             WN+M+ GY Q G      ++F+KM +   + PD  T  +VL++C +
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACAN 291



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 10/208 (4%)

Query: 473 CREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ----DIFVESAVIDMYCKCG 527
           CR + +G  FS+ L         + G A+H   L   +D+      F  + V+  Y K G
Sbjct: 38  CRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKL---FDEMPLRTAFSWNTVLSAYAKRG 94

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++ +   F ++ +     W  M++GY   G YH+   +  +M + G++P + T   VL 
Sbjct: 95  DMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLA 154

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           S      +   +   S +  L GL   +     ++++  + G    AK+  D+M +  D 
Sbjct: 155 SVAATRCLETGKKVHSFIVKL-GLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRM-VVKDI 212

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLE 675
             W ++++     G +DL +    ++ E
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAE 240


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 212/668 (31%), Positives = 365/668 (54%), Gaps = 22/668 (3%)

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           + H   LK GF S ++L +  I  Y + G+ VSA   F +  D + V +  ++ GY  NG
Sbjct: 21  LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV----KEGEQIHGFGVKVGFLSGVCNH 214
             + +  V  EM   G   N F+  + + A  +     ++G Q+HG+ ++ G L+     
Sbjct: 81  MPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTG-LNDAKVA 139

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-------L 267
           + N ++N+Y +CG    A  +F  + + D VSW+  I     G++    F+D       +
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMIT----GLDQNKCFEDAVKSYNSM 195

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           R      + + +I+ LSS      +  G+Q      K+G    VS+ N L+++Y +  ++
Sbjct: 196 RKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRL 255

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGF-FNQALDMFCHMLEFSLIPNGYTMASILEA 386
            + + +F +++ +D VSWN++I   +++G   ++A+++F  M+     PN  T  ++L  
Sbjct: 256 AECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVH 445
           VS+  + K + Q+H+ I+K     D+++ + L+  YGK   +   + + S + ++++ V 
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            N++ S  ++     +A++L   +    + ++  TF+ VL ACA +  LE G  +H  A+
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI 435

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           +A  + D+ + SA++DMY KCG I+ A R F  +   +L  WN+M+ GYA+HG       
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALR 495

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF +M   G  PD IT++ VL++C H GLV E   Y   M++++GL+P++EHY+C+VDLL
Sbjct: 496 LFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLL 555

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN---IDLGLLAGSKLLELQPDNES 682
           GR G L+  +  I++MPI P+  IW+++L AC   GN    +LG  A   L  + P N  
Sbjct: 556 GRAGELDKIENFINKMPIKPNILIWRTVLGACC-RGNGRKTELGRRAAEMLFNMDPQNAV 614

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
            YVLLSN+YAS G W D+ + R+ M+E  + KE G SW+ +    H F AGD+SH +   
Sbjct: 615 NYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGL 674

Query: 743 IYKELIKL 750
           IY +L +L
Sbjct: 675 IYAKLKEL 682



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/605 (25%), Positives = 278/605 (45%), Gaps = 58/605 (9%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           ++K+G   D  L  TLI+ + +  D   A +   +  +R+ +T+  LISG  +      A
Sbjct: 26  VLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDA 85

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFS-SRVYLVSGFI 120
             +   + ++G  P+ F F S ++AC       ++   VHG  ++ G + ++V + +G I
Sbjct: 86  CGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLI 145

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             YAK G+I  A   F   +D D+V++ +M+ G   N  F+ + + +  MR  GL  + F
Sbjct: 146 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 205

Query: 181 SLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L + L +      +  G+Q HG G+K+G    V   ++N ++ LY    +  +  K+F 
Sbjct: 206 ALISALSSCASLGCILLGQQTHGEGIKLGLDMDV--SVSNTLLALYAETSRLAECQKVFS 263

Query: 238 EITEPDVVSWSERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            + E D VSW+  I A  D      EA  +F ++    +  N  T INLL++V      +
Sbjct: 264 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 323

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGY 352
              QI A   K    +  +I NAL++ YGK G++ +   IF  +   +D VSWNSMI+GY
Sbjct: 324 LSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGY 383

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             N    +A+D+   M++     + +T A++L A +   +L+  M+VH+  I++    D 
Sbjct: 384 IHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDV 443

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S L+  Y KC  ++ + R  + +  +N    N++ S          AL L+  +  S
Sbjct: 444 VIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLS 503

Query: 473 CREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +  +  TF  VL AC+ +  +++G            L  R +      S ++D+  + G
Sbjct: 504 GQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEH----YSCMVDLLGRAG 559

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++                               ++ N  NKM    +KP+ + +  VL 
Sbjct: 560 ELD-------------------------------KIENFINKMP---IKPNILIWRTVLG 585

Query: 588 SCCHA 592
           +CC  
Sbjct: 586 ACCRG 590



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++  I+     D ++ + L+  ++K      A RF      R++ ++N++ISG AR  
Sbjct: 429 EVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHG 488

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRVYLV 116
               AL+LF R++  G  PD  TF  ++ AC   G + E  E    +    G   RV   
Sbjct: 489 HGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHY 548

Query: 117 SGFIENYAKSGEIVSAE 133
           S  ++   ++GE+   E
Sbjct: 549 SCMVDLLGRAGELDKIE 565


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 227/685 (33%), Positives = 358/685 (52%), Gaps = 33/685 (4%)

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D FT    +KAC G  +    +HG  +  GF S + + +  +  Y KSG++  A   F++
Sbjct: 74  DEFTLVLALKACCGFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQN 133

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGLELNEFSLTAVLGASFDVKE- 194
             D D V++  ++ G      F+KS+      + M   G++ +  + T  L    D +E 
Sbjct: 134 LHDPDIVSWNTILSG------FEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEF 187

Query: 195 --GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G Q+H   +K GF   V   + NA++ +Y R    +DA K+FDE+   D VSWS  I 
Sbjct: 188 LFGWQLHTLALKCGFKGDV--FVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMIT 245

Query: 253 AAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                  +G++A  +F  +     + +   +   LS  G ER L  GKQI     K G  
Sbjct: 246 GYAQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHE 305

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
              S+GN LIS Y KC  + DA+++F+ +  ++ +SW +MI+ Y E      A+ +F  M
Sbjct: 306 THTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKM 360

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               + PN  T   +L A++    ++Q + VH   IK+ F+ + ++ + LIT Y K   +
Sbjct: 361 RLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFM 420

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++ RV  E+  +  +  NAL S     +   EALE +       +  N  TF  VL A 
Sbjct: 421 QDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEYKP-NEYTFGSVLNAI 479

Query: 489 AAMTD--LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           +A  D  L+ G+  H   +K   + D  +  A++DMY K G+I++++R F +  + S   
Sbjct: 480 SAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFA 539

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W A++ GYAQHG Y  V  LF +M K  +KPD + +L+VLT+C    +V   R + + M 
Sbjct: 540 WTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMI 599

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             H + P+ EHY+C+VD+LGR G LE A+  + ++P  P     QSLL AC  +GN+++ 
Sbjct: 600 KDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMA 659

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG- 725
               + L++ +P     YVL+SNLYA  G W  V K+RKEM+E+ + KE G+SW+ VG  
Sbjct: 660 ERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDVGNF 719

Query: 726 -----YTHHFYAGDSSHSQSKEIYK 745
                Y H F +GD SH QS+EI++
Sbjct: 720 GASNLYLHGFSSGDVSHPQSEEIFR 744



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 282/553 (50%), Gaps = 26/553 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +I +G      +S +L++ + K     RAF    +  + DI+++N ++SG   F 
Sbjct: 94  QIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSG---FE 150

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +S  AL    R+   G++ D+ T+++ +  C   +E      +H + LK GF   V++ +
Sbjct: 151 KSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGN 210

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGLE 176
             +  Y++   +V A   F +    D V+++AM+ GY   G+   ++  VFV+M   G++
Sbjct: 211 ALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVK 270

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +   +T  L   G   +++ G+QIH   VK G  +     + N +++ Y +C    DA 
Sbjct: 271 FDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTS--VGNVLISTYSKCEIIEDAK 328

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            +F+ I + +V+SW+  I+   +G  A  LF  +R +    N+ T I LL ++    ++ 
Sbjct: 329 AVFELINDRNVISWTTMISLYEEG--AVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVE 386

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G  +   C K  F+  +++GN+LI+MY K   + DA  +F  L +++ +SWN++I+GY+
Sbjct: 387 QGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYA 446

Query: 354 ENGFFNQALDMFCH-MLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKSGFLL 410
           +N    +AL+ F + ++E+   PN YT  S+L A+S  +  SLK   + HSH+IK G  +
Sbjct: 447 QNALCQEALEAFLYAIMEYK--PNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNV 504

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  +   L+  Y K  ++ ES+RV +E  K++     AL S       +   ++L+  + 
Sbjct: 505 DPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEME 564

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKC 526
               + +   F  VL AC+    ++ G+    + +K   D  I  E    S ++DM  + 
Sbjct: 565 KERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIK---DHMIEPEGEHYSCMVDMLGRA 621

Query: 527 GTIEDAKRAFRKI 539
           G +E+A+    +I
Sbjct: 622 GRLEEAEEILARI 634



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 6/262 (2%)

Query: 332 SIFDYLIFKDSVSWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           ++FD     ++ S+N ++  Y   +G F Q+L  F +   + L  N      +L   +  
Sbjct: 28  NLFDQSPPPNAASFNRVLLNYLPRDGAF-QSLRFFKNNFRWGLDGNADEFTLVLALKACC 86

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
              K   Q+H  +I SGF+   ++ + L+  Y K   L  +  V   +   + V  N + 
Sbjct: 87  GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTIL 146

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S     S +A +  L   + G   + +  T++  L  C    +   G  +H LALK  + 
Sbjct: 147 SGF-EKSENALSFALRMNLNGV--KFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFK 203

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH-EVSNLFNK 569
            D+FV +A++ MY +   + DA++ F ++       W+AM+ GYAQ G    +   +F +
Sbjct: 204 GDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQ 263

Query: 570 MSKFGVKPDEITYLAVLTSCCH 591
           M + GVK D +     L+ C H
Sbjct: 264 MVREGVKFDNVPITGALSVCGH 285



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 14/264 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR--F 59
           ++ L IK     +  +  +LI+ + KF   + A R   +   R+II++NALISG A+   
Sbjct: 391 VHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNAL 450

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG-----SLQENEIVHGVCLKLGFSSRVY 114
           CQ      L+  + Y   +P+ +TF S++ A       SL+  +  H   +K+G +    
Sbjct: 451 CQEALEAFLYAIMEY---KPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPI 507

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +    ++ YAK G I  ++  F +       A+TA++ GY  +G+++   ++F EM    
Sbjct: 508 ISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKER 567

Query: 175 LELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +     +VL A   +  V  G Q     +K   +     H  + ++++  R G+  +
Sbjct: 568 IKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHY-SCMVDMLGRAGRLEE 626

Query: 232 AVKMFDEITEPDVVSWSERIAAAC 255
           A ++   I     VS  + +  AC
Sbjct: 627 AEEILARIPGGPGVSALQSLLGAC 650


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 228/756 (30%), Positives = 398/756 (52%), Gaps = 21/756 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D  L+T L+  + K      A R LFD   +R + ++NALI        +  AL ++  +
Sbjct: 94  DGFLATKLLFMYGKCGRVADA-RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAM 152

Query: 73  RYQ---GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKS 126
           R     G+ PD  T +S++KA G   +      VHG+ +K G     ++ +  I  YAK 
Sbjct: 153 RLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKC 212

Query: 127 GEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
           G + SA   F    D  +VA + +M+ G + NG F ++ ++F  M+   L +N ++   V
Sbjct: 213 GILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGV 272

Query: 186 LGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L    ++ +   G ++H   +K G      N   NA++ +Y +CG+   A+++F EI E 
Sbjct: 273 LQVCTELAQLNLGRELHAALLKSG---SEVNIQCNALLVMYTKCGRVDSALRVFREIDEK 329

Query: 243 DVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D +SW+  ++         EA     ++    FQ +   +++L S+VG    L  GK++ 
Sbjct: 330 DYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVH 389

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A+  K        +GN L+ MY KC  +  +  +FD +  KD +SW ++I  Y+++    
Sbjct: 390 AYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHI 449

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +AL++F    +  +  +   + SILEA S  +++  A Q+H + I++G LLD  + + +I
Sbjct: 450 EALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNG-LLDLVVKNRII 508

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             YG+C  +  S ++   +++K+ V   ++ +    +    EAL L+  +  +  + +  
Sbjct: 509 DIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSV 568

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
               +L A   ++ L +GK +H   ++  +  +  + S+++DMY  CG++  A + F  +
Sbjct: 569 ALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAV 628

Query: 540 -CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
            C+D +  W AM+     HG   +  +LF +M + GV PD +++LA+L +C H+ LV E 
Sbjct: 629 KCKD-MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEG 687

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           + YL  M   + L P  EHYAC+VDLLGR G  E A   I  MP+ P + +W SLL AC 
Sbjct: 688 KCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACR 747

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ N +L ++A ++LLEL+PDN   YVL+SN++A  G WN+  ++R  + E+ L K+P  
Sbjct: 748 VHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPAC 807

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           SWI +G   H F   D+SH  ++ I  +L ++ E +
Sbjct: 808 SWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERL 843



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 253/526 (48%), Gaps = 26/526 (4%)

Query: 185 VLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           ++ A   V +G Q+H   V  G L G    L   ++ +Y +CG+  DA  +FD ++   V
Sbjct: 67  LVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTV 126

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRF---NDFQINEYTMINLLSSVGGERILRAGKQI 298
            SW+  I A   +    EA G+++ +R    +    +  T+ ++L + G E   R G ++
Sbjct: 127 FSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEV 186

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGF 357
                K G      + NALI+MY KCG ++ A  +F+ +   +D  SWNSMI+G  +NG 
Sbjct: 187 HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGM 246

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
           F QALD+F  M    L  N YT   +L+  +    L    ++H+ ++KSG  ++   I C
Sbjct: 247 FLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN---IQC 303

Query: 418 --LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
             L+  Y KC  ++ + RV  EID+K+ +  N++ S  V    +AEA+E    +     +
Sbjct: 304 NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQ 363

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            + +    +  A   +  L  GK +H  A+K R D D  V + ++DMY KC  IE +   
Sbjct: 364 PDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHV 423

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++       W  ++  YAQ   + E   +F +  K G+K D +   ++L +C     +
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI 483

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG-LLEGAKM--TIDQMPIPPDAHIWQS 652
             A+  L C +  +GL+  L     I+D+ G  G +    KM  T++Q     D   W S
Sbjct: 484 LLAKQ-LHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQ----KDIVTWTS 537

Query: 653 LLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
           +++     G  N  L L A  +  ++QPD   +  L+S L A  G+
Sbjct: 538 MINCYANSGLLNEALVLFAEMQSTDVQPD---SVALVSILGAIGGL 580



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   I+NG  LD ++   +I  + +  +   + +     + +DI+T+ ++I+  A   
Sbjct: 488 QLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSG 546

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  ++   ++PD+    S++ A G   SL + + VHG  ++  F     +VS
Sbjct: 547 LLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVS 606

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+  G +  A   F      D V +TAM+     +G   ++ ++F  M   G+  
Sbjct: 607 SLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTP 666

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S  A+L A   S  V EG+      +    L     H    +++L  R GQ  +A +
Sbjct: 667 DHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHY-ACVVDLLGRSGQTEEAYE 725

Query: 235 MFDEIT-EPDVVSWSERIAA 253
               +  +P  V W   + A
Sbjct: 726 FIKSMPLKPKSVVWCSLLGA 745


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 233/710 (32%), Positives = 363/710 (51%), Gaps = 14/710 (1%)

Query: 56   LARFCQSGPALKLFDRLRY-QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSS 111
            + +FC+ G      + LR  Q    D   +SS+++ C     LQE ++VH V    G   
Sbjct: 425  ICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPI 484

Query: 112  RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEM 170
               L +  +  Y   G +      F   L  + V  +  M+  Y   G++ +S  +F +M
Sbjct: 485  EGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKM 544

Query: 171  RSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            + LG+  N ++ + +L        V E ++IHG   K+GF  G  N + N+++  Y + G
Sbjct: 545  QKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGF--GSYNTVVNSLIATYFKSG 602

Query: 228  QKLDAVKMFDEITEPDVVSWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTMINLLS 284
            +   A K+FDE+ + DVVSW+  I+    +G    A   F  +      ++  T++N ++
Sbjct: 603  EVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVA 662

Query: 285  SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
            +      L  G+ +     K  F   V   N L+ MY KCG +NDA   F+ +  K  VS
Sbjct: 663  ACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVS 722

Query: 345  WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            W S+IA Y   G ++ A+ +F  M    + P+ Y+M S+L A +   SL +   VH++I 
Sbjct: 723  WTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIR 782

Query: 405  KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
            K+   L   + + L+  Y KC ++ E+  V S+I  K+ V  N +       S   EAL+
Sbjct: 783  KNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALK 842

Query: 465  LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
            L+  +    R  +G T + +L AC ++  LE G+ IH   L+  Y  ++ V +A+IDMY 
Sbjct: 843  LFAEMQKESRP-DGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYV 901

Query: 525  KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            KCG++  A+  F  I    L  W  M+ G   HG  +E    F KM   G+KPDEIT+ +
Sbjct: 902  KCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTS 961

Query: 585  VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
            +L +C H+GL+ E   + + M     + P+LEHYAC+VDLL R G L  A   I+ MPI 
Sbjct: 962  ILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIK 1021

Query: 645  PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            PDA IW +LL  C I+ +++L       + EL+PDN   YVLL+N+YA A  W +V KLR
Sbjct: 1022 PDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLR 1081

Query: 705  KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + + ++ L K PG SWI V G    F + D++H Q+K I+  L  L   M
Sbjct: 1082 ERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKM 1131



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 200/409 (48%), Gaps = 27/409 (6%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            +LI+ + K  +   A +   +  +RD++++N++ISG      S  AL+ F ++    + 
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651

Query: 79  PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D  T  + V AC   GSL     +HG  +K  FS  V   +  ++ Y+K G +  A   
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL-----GASF 190
           F        V++T+++  YV  G +D +  +F EM S G+  + +S+T+VL     G S 
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D  +G  +H +  K      +C  ++NA+M++Y +CG   +A  +F +I   D+VSW+  
Sbjct: 772 D--KGRDVHNYIRKNNM--ALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTM 827

Query: 251 IAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF +++  + + +  TM  LL + G    L  G+ I     + G+
Sbjct: 828 IGGYSKNSLPNEALKLFAEMQ-KESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGY 886

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              + + NALI MY KCG +  AR +FD +  KD ++W  MI+G   +G  N+A+  F  
Sbjct: 887 SSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQK 946

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
           M    + P+  T  SIL A S           HS ++  G+   +SMIS
Sbjct: 947 MRIAGIKPDEITFTSILYACS-----------HSGLLNEGWGFFNSMIS 984



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 169/352 (48%), Gaps = 24/352 (6%)

Query: 16   ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
            + + TL+  ++K  +   A +       + ++++ +LI+   R      A++LF  +  +
Sbjct: 690  MFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESK 749

Query: 76   GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            G+ PD ++ +S++ AC    SL +   VH    K   +  + + +  ++ YAK G +  A
Sbjct: 750  GVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEA 809

Query: 133  EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM----RSLGLELNEFSLTAVLGA 188
             + F      D V++  M+ GY  N   +++ ++F EM    R  G+ +    L    G+
Sbjct: 810  YLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMA--CLLPACGS 867

Query: 189  SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
               ++ G  IHG  ++ G+ S +  H+ NA++++YV+CG  + A  +FD I E D+++W+
Sbjct: 868  LAALEIGRGIHGCILRNGYSSEL--HVANALIDMYVKCGSLVHARLLFDMIPEKDLITWT 925

Query: 249  ERIAAACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG----KQIQA 300
              I + C     G EA   F+ +R    + +E T  ++L +     +L  G      + +
Sbjct: 926  VMI-SGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMIS 984

Query: 301  FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAG 351
             C     +E  +    ++ +  + G ++ A ++ + +  K D+  W +++ G
Sbjct: 985  ECNMEPKLEHYA---CMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCG 1033



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I+  +++NG+  +  ++  LI  + K      A R LFD    +D+IT+  +ISG     
Sbjct: 877 IHGCILRNGYSSELHVANALIDMYVKCGSLVHA-RLLFDMIPEKDLITWTVMISGCGMHG 935

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A+  F ++R  G++PD  TF+S++ AC
Sbjct: 936 LGNEAIATFQKMRIAGIKPDEITFTSILYAC 966


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 230/687 (33%), Positives = 366/687 (53%), Gaps = 14/687 (2%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D     SL+K C     L++ +++H   + LG  + + L    I  Y       SA++ F
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 137 RDCLD-LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGASF---D 191
           +   + LD   +  ++     N  F +  EVF  +     L+ + F+  +VL A      
Sbjct: 62  QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           V  G+ +H   +K GF   V   + ++ + +Y +C    DA+K+FDE+ E DV SW+  I
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVV--VMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVI 179

Query: 252 AAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +    DG   +A  LF++++ + F+ +  T+  ++SS      L  GK+I     + GF 
Sbjct: 180 SCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 239

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + +AL+ MYGKCG +  A+ +F+ +  K+ VSWNSMIAGYS  G     +++F  M
Sbjct: 240 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            E  + P   T++SIL A S S +L+    +H +II++    D  + S LI  Y KC  +
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             ++ V   + K N V  N + S  V    + EAL ++  +  +  + +  TF+ VL AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           + +  LE+GK IH   ++++ + +  V  A++DMY KCG +++A   F ++       W 
Sbjct: 420 SQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWT 479

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +M+  Y  HG   E   LF KM +   KPD++T+LA+L++C HAGLV E   Y + M   
Sbjct: 480 SMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAE 539

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNIDLGL 667
           +G  P +EHY+C++DLLGRVG L  A   + + P I  D  +  +L SAC ++  +DLG 
Sbjct: 540 YGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGE 599

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
             G  L+E  PD+ STY++LSN+YAS   W++V K+R ++KE  L K PG SWI VG   
Sbjct: 600 QIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRI 659

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
           H F   D SH Q+  IY+ +  L  H+
Sbjct: 660 HPFVVEDKSHPQADMIYECMSILASHV 686



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 279/551 (50%), Gaps = 18/551 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT--QNRDIITYNALISGLARF 59
           I+  ++  G   +  L  +LI+ +     F+ A + +F T     DI  +N L++   + 
Sbjct: 25  IHQKIVSLGLQNNITLCKSLINLYFSCHLFQSA-KLVFQTIENPLDITLWNGLMAACTKN 83

Query: 60  CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
                 L++F RL  +  L+PDAFT+ S++KAC   G +   ++VH   +K GF+  V +
Sbjct: 84  FIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVV 143

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +S  +  YAK      A   F +  + D  ++  ++  Y  +G+ +K+ E+F EM+  G 
Sbjct: 144 MSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGF 203

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +  +LT V+ +     D++ G++IH   V+ GF   +   +++A++++Y +CG    A
Sbjct: 204 KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF--ALDGFVSSALVDMYGKCGCLEMA 261

Query: 233 VKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F++I   +VVSW+  IA      D      LF+ +     +    T+ ++L +    
Sbjct: 262 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 321

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L+ GK I  +  +      + + ++LI +Y KCG +  A ++F  +   + VSWN MI
Sbjct: 322 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 381

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY + G + +AL +F  M +  + P+  T  S+L A S    L++  ++H+ II+S   
Sbjct: 382 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 441

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           +++ ++  L+  Y KC A++E+  + +++ +++ V   ++ +         EAL+L+  +
Sbjct: 442 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 501

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCG 527
             S  + +  TF  +L AC+    +++G   +   + A Y     VE  S +ID+  + G
Sbjct: 502 QQSDAKPDKVTFLAILSACSHAGLVDEG-CYYFNQMIAEYGFKPAVEHYSCLIDLLGRVG 560

Query: 528 TIEDAKRAFRK 538
            + +A    ++
Sbjct: 561 RLREAYEILQR 571



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 238/471 (50%), Gaps = 21/471 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ +IK+G  +D ++ ++ +  + K   F  A +   +   RD+ ++N +IS   +  Q
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL+LF+ ++  G +PD+ T ++++ +C     L+  + +H   ++ GF+   ++ S 
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G +  A+  F      + V++ +M+ GY   G+     E+F  M   G+   
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L+++L A   S +++ G+ IHG+ ++    + +   +N+++++LY +CG    A  +
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI--FVNSSLIDLYFKCGNIGSAENV 365

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  + + +VVSW+  I+        +EA  +F D+R    + +  T  ++L +     +L
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425

Query: 293 RAGKQIQAFCY--KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             GK+I  F    K+   EVV    AL+ MY KCG V++A  IF+ L  +D VSW SMIA
Sbjct: 426 EKGKEIHNFIIESKLEINEVVM--GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 483

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
            Y  +G   +AL +F  M +    P+  T  +IL A S++  + +     + +I   GF 
Sbjct: 484 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 543

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCH 459
                 SCLI   G+   L E+  +L    D +  V    L S L +++CH
Sbjct: 544 PAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV---GLLSTL-FSACH 590



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 183/350 (52%), Gaps = 24/350 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  L+++G  LD  +S+ L+  + K      A       Q ++++++N++I+G +   
Sbjct: 228 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 287

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
            S   ++LF R+  +G+RP   T SS++ AC    +LQ  + +HG  ++    + +++ S
Sbjct: 288 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 347

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G I SAE  F++    + V++  M+ GYV  G + ++  +F +MR  G++ 
Sbjct: 348 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 407

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  + T+VL A      +++G++IH F ++      +   +  A++++Y +CG   +A+ 
Sbjct: 408 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKL--EINEVVMGALLDMYAKCGAVDEALH 465

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+++ E D VSW+  IAA        EA  LF+ ++ +D + ++ T + +LS+     +
Sbjct: 466 IFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGL 525

Query: 292 LRAGKQIQAFCY-------KVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  G      CY       + GF   V   + LI + G+ G++ +A  I 
Sbjct: 526 VDEG------CYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEIL 569


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 202/607 (33%), Positives = 320/607 (52%), Gaps = 69/607 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           N++++LY + G+  DA  +F E+ + D VSW+  I          +A   F D+    F 
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR-- 331
            +++T+ N+LSS         G+++  F  K+G    V + N+++ MYGKCG    AR  
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404

Query: 332 -----------------------------SIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
                                        S+F+ ++ +  VSWN++IAGY++NG    AL
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMAL 464

Query: 363 DMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             F  ML  S + P+ +T+ S+L A +N + LK   Q+HS+I+++G      +++ LI+T
Sbjct: 465 KFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIST 524

Query: 422 YGKCNALNESKRVLSEI---------------------DKKNAVHI-------NALASVL 453
           Y K  ++  ++R++ +                      D K A  I       + +A   
Sbjct: 525 YAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTA 584

Query: 454 VYASCHA-----EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +    H      EA+EL+R++     E N  T + VL ACA++  L+ GK IHC A+++ 
Sbjct: 585 MIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSL 644

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +Q + V +A+I +Y + G++  A+R F +IC R     W +M++  AQHG   +   LF
Sbjct: 645 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLF 704

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + GVKPD ITY+ VL++C HAG V + + Y   M + HG++PQ+ HYAC+VDL  R
Sbjct: 705 EEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHAR 764

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            GLL  A   I +MP+ PD  +W SLL+AC +  N DL  LA  KLL + P N   Y  L
Sbjct: 765 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSAL 824

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+Y++ G WND  ++ K  K+K + KE G+SW HV G  H F A D  H Q   IY++ 
Sbjct: 825 ANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKA 884

Query: 748 IKLYEHM 754
            +++E +
Sbjct: 885 AEMWEEI 891



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 235/539 (43%), Gaps = 107/539 (19%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAKSG +  A + F +  D D V++T M+ G   +G F  + + F++M S G   ++F+L
Sbjct: 291 YAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTL 350

Query: 183 TAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG---------QKL 230
           T VL +   ++    G ++H F VK+G  S  C  + N+++ +Y +CG         +++
Sbjct: 351 TNVLSSCAAMEACGVGRKVHPFVVKLGLSS--CVPVANSVLYMYGKCGDAETARAVFERM 408

Query: 231 D----------------------AVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLF 264
                                  AV MF+ + E  +VSW+  IA       DG+      
Sbjct: 409 QVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFS 468

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + L  +  + + +T+ ++LS+    R+L+ GKQ+ ++  + G      I NALIS Y K 
Sbjct: 469 RMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKS 528

Query: 325 GQV---------------------------------NDARSIFDYLIFKDSVSWNSMIAG 351
           G V                                   AR IFD +  +D ++W +MI G
Sbjct: 529 GSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVG 588

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y +NG  ++A+++F  M+     PN +T+A++L A ++   L    Q+H   I+S     
Sbjct: 589 YHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQS 648

Query: 412 DSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            S+ + +IT Y +  ++  ++RV  +I  +K  +   ++   +       +A+ L+  + 
Sbjct: 649 VSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMV 708

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
               + +  T+  VL ACA    +++GK         RY + +  E  ++          
Sbjct: 709 RVGVKPDHITYVGVLSACAHAGFVDKGK---------RYYEQMQNEHGIV---------- 749

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                        ++ +  M+  +A+ G   E      +M    V PD + + ++L +C
Sbjct: 750 -----------PQMSHYACMVDLHARAGLLTEAHEFIQRMP---VAPDTVVWGSLLAAC 794



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/493 (21%), Positives = 213/493 (43%), Gaps = 74/493 (15%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           +L+S + K      A     +  +RD +++  +I GL R  +   A+K F  +  +G  P
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAP 345

Query: 80  DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC- 135
             FT ++++ +C +++       VH   +KLG SS V + +  +  Y K G+  +A    
Sbjct: 346 SQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVF 405

Query: 136 ------------------------------FRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
                                         F + ++   V++  ++ GY  NG    + +
Sbjct: 406 ERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALK 465

Query: 166 VFVEMRSL-GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFL------------- 208
            F  M S   +E + F++T+VL A  +   +K G+Q+H + ++ G               
Sbjct: 466 FFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTY 525

Query: 209 --------------SGVCNHLN----NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
                           V   LN     A++  YV+ G    A ++FD +   DV++W+  
Sbjct: 526 AKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAM 585

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF+ +     + N +T+  +LS+      L  GKQI     +   
Sbjct: 586 IVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ 645

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFC 366
            + VS+ NA+I++Y + G V  AR +FD + + K++++W SMI   +++G   QA+ +F 
Sbjct: 646 EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFE 705

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSMISCLITTYGKC 425
            M+   + P+  T   +L A +++  + +  + +  +  + G +   S  +C++  + + 
Sbjct: 706 EMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARA 765

Query: 426 NALNESKRVLSEI 438
             L E+   +  +
Sbjct: 766 GLLTEAHEFIQRM 778



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 171/377 (45%), Gaps = 48/377 (12%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRP 79
           ++S +T       A     +   R I+++N +I+G  +    G ALK F R L    + P
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           DAFT +S++ AC +L+  ++   +H   L+ G      +++  I  YAKSG + +A    
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538

Query: 137 -----------------------------RDCLDL----DNVAYTAMVCGYVWNGEFDKS 163
                                        R+  D+    D +A+TAM+ GY  NG+ D++
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            E+F  M  +G E N  +L AVL A      +  G+QIH   ++   L      ++NAI+
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS--LQEQSVSVSNAII 656

Query: 221 NLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINE 276
            +Y R G    A ++FD+I    + ++W+  I A      G +A  LF+++     + + 
Sbjct: 657 TVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDH 716

Query: 277 YTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
            T + +LS+      +  GK+  +    + G +  +S    ++ ++ + G + +A     
Sbjct: 717 ITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQ 776

Query: 336 YL-IFKDSVSWNSMIAG 351
            + +  D+V W S++A 
Sbjct: 777 RMPVAPDTVVWGSLLAA 793



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 119/249 (47%), Gaps = 9/249 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDR 71
           L+ I  T L+  + K  D ++A R +FD   NRD+I + A+I G  +  Q+  A++LF  
Sbjct: 546 LNVISFTALLEGYVKLGDTKQA-REIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRS 604

Query: 72  LRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +   G  P++ T ++++ AC S   L   + +H   ++      V + +  I  YA+SG 
Sbjct: 605 MILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGS 664

Query: 129 IVSAEMCFRD-CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           +  A   F   C   + + +T+M+     +G  +++  +F EM  +G++ +  +   VL 
Sbjct: 665 VPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLS 724

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEIT-EPDV 244
           A       ++   +  ++    G+   +++   +++L+ R G   +A +    +   PD 
Sbjct: 725 ACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDT 784

Query: 245 VSWSERIAA 253
           V W   +AA
Sbjct: 785 VVWGSLLAA 793



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 8/168 (4%)

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           ++ F  ++++ +Y K G + DA   F ++       W  M++G  + G + +    F  M
Sbjct: 279 RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 571 SKFGVKPDEITYLAVLTSCC---HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
              G  P + T   VL+SC      G+ R+   ++  +  L   +P       ++ + G+
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG-LSSCVPVAN---SVLYMYGK 394

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
            G  E A+   ++M +      W  ++S  T  G ++L +     ++E
Sbjct: 395 CGDAETARAVFERMQV-RSVSSWNVMVSLYTHQGRMELAVSMFENMVE 441


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 241/774 (31%), Positives = 388/774 (50%), Gaps = 29/774 (3%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR------DIITYNALISG 55
            I++ ++  G   DP ++T+LI+ + K      A + +FD  +       DI  +N +I G
Sbjct: 463  IHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQ-VFDKMSESRDSAPDITVWNPVIDG 521

Query: 56   LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSR 112
              ++      L  F R++  G+RPD ++ S ++  C  L        +HG  ++  F   
Sbjct: 522  YFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGD 581

Query: 113  VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             YL +  I  Y+     + A   F    +  N VA+  M+ G+V NG ++KS E++   +
Sbjct: 582  PYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAK 641

Query: 172  SLGLELNEFSLTAVL-----GASFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYV 224
            +   +L   S T        G   D   G Q+H   +K+ F     VC  L    + +Y 
Sbjct: 642  NENCKLVSASFTGAFTACSHGEVLDF--GRQVHCDVIKMNFQDDPYVCTSL----LTMYA 695

Query: 225  RCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN 281
            + G   DA K+FD++ + +V   +  I+A        +A GL+  ++  +  ++ +T+ +
Sbjct: 696  KSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISS 755

Query: 282  LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
            LLS          G+ + A   K      V+I +AL++MY KCG   DA S+F  +  +D
Sbjct: 756  LLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERD 815

Query: 342  SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
             V+W SMIAG+ +N  F  ALD+F  M +  +  +   M S++ A    ++++    +H 
Sbjct: 816  VVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHG 875

Query: 402  HIIKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              IK G L  D  ++C L+  Y K      ++ V S +  KN V  N++ S   +     
Sbjct: 876  FAIKRG-LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPE 934

Query: 461  EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
             ++ L   I      ++  + + VL A +++  L +GK +H   ++ +   D+ VE+A+I
Sbjct: 935  MSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALI 994

Query: 521  DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            DMY KCG ++ A+  F  + R +L  WN+M+ GY  HG   E   LF +M +    PDE+
Sbjct: 995  DMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEV 1054

Query: 581  TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
            T+LA++TSC H+G+V E       M   +G+ P++EHYA +VDLLGR G L+ A   I  
Sbjct: 1055 TFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRG 1114

Query: 641  MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
            MPI  D  +W  LL AC  + N++LG L    LL+++P   S YV L NLY    MW+  
Sbjct: 1115 MPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRA 1174

Query: 701  GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
              LR  MK + L K PG SWI V      F++GDSS ++  EIYK L  L  +M
Sbjct: 1175 ANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNM 1228



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 168/668 (25%), Positives = 305/668 (45%), Gaps = 36/668 (5%)

Query: 53   ISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF 109
            I  L +  +   AL+L  +  +  L    FTF SL+K C SL        +H   + +G 
Sbjct: 413  IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 110  SSRVYLVSGFIENYAKSGEIVSAEMCF------RDCLDLDNVAYTAMVCGYVWNGEFDKS 163
             S  Y+ +  I  Y K G + SA   F      RD    D   +  ++ GY   G F++ 
Sbjct: 473  QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAP-DITVWNPVIDGYFKYGHFEEG 531

Query: 164  KEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIM 220
               F  M+ LG+  + +SL+ VLG    +     G QIHG+ ++  F      +L  A++
Sbjct: 532  LAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGD--PYLETALI 589

Query: 221  NLYVRCGQKLDAVKMFDEI-TEPDVVSWSERIAAACDGVEAFGLF-KDLRFNDFQINEYT 278
             +Y  C + ++A  +F ++    ++V+W+  I     G    G++ K L       NE  
Sbjct: 590  GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG----GFVENGMWEKSLELYSLAKNENC 645

Query: 279  MINLLSSVG-------GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             +   S  G       GE +L  G+Q+     K+ F +   +  +L++MY K G V DA+
Sbjct: 646  KLVSASFTGAFTACSHGE-VLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAK 704

Query: 332  SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
             +FD ++ K+    N+MI+ +  NG    AL ++  M       + +T++S+L   S   
Sbjct: 705  KVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVG 764

Query: 392  SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            S      VH+ +IK     + ++ S L+T Y KC +  ++  V   + +++ V   ++ +
Sbjct: 765  SYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIA 824

Query: 452  VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                     +AL+L+R +     + +    + V+ A   + ++E G  IH  A+K   + 
Sbjct: 825  GFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLES 884

Query: 512  DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            D+FV  +++DMY K G  E A+  F  +   +L  WN+M+  Y+ +G      NL  ++ 
Sbjct: 885  DVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQIL 944

Query: 572  KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ-LEHYACIVDLLGRVGL 630
            + G   D ++   VL +      + + +T  +    L   IP  L+    ++D+  + G 
Sbjct: 945  QHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ--IPSDLQVENALIDMYVKCGC 1002

Query: 631  LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLS 688
            L+ A++  + MP   +   W S+++    +GN +  + L    K  E  PD E T++ L 
Sbjct: 1003 LKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPD-EVTFLALI 1060

Query: 689  NLYASAGM 696
               + +GM
Sbjct: 1061 TSCSHSGM 1068



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 265/558 (47%), Gaps = 21/558 (3%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
            QI+  +I+N    DP L T LI  ++  +    A+      +NR +I+ +N +I G    
Sbjct: 568  QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 627

Query: 60   CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
                 +L+L+   + +  +  + +F+    AC     L     VH   +K+ F    Y+ 
Sbjct: 628  GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 687

Query: 117  SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            +  +  YAKSG +  A+  F   LD +     AM+  ++ NG    +  ++ +M++    
Sbjct: 688  TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 747

Query: 177  LNEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            ++ F+++++L       S+D   G  +H   +K    S V   + +A++ +Y +CG   D
Sbjct: 748  VDSFTISSLLSGCSVVGSYDF--GRTVHAEVIKRSMQSNVA--IQSALLTMYYKCGSTED 803

Query: 232  AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A  +F  + E DVV+W   IA  C      +A  LF+ +     + +   M +++S+  G
Sbjct: 804  ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLG 863

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               +  G  I  F  K G    V +  +L+ MY K G    A  +F  +  K+ V+WNSM
Sbjct: 864  LENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSM 923

Query: 349  IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            I+ YS NG    ++++   +L+     +  ++ ++L AVS+  +L +   +H++ I+   
Sbjct: 924  ISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI 983

Query: 409  LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL-ASVLVYASCHAEALELYR 467
              D  + + LI  Y KC  L  ++ +   + ++N V  N++ A    + +C  EA+ L++
Sbjct: 984  PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCE-EAVRLFK 1042

Query: 468  TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
             +  S    +  TF  ++ +C+    +E+G  +  L ++  Y  +  +E  ++V+D+  +
Sbjct: 1043 EMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQL-MRIEYGVEPRMEHYASVVDLLGR 1101

Query: 526  CGTIEDAKRAFRKICRDS 543
             G ++DA    R +  D+
Sbjct: 1102 AGRLDDAYSFIRGMPIDA 1119



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 9/169 (5%)

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
           N L   K VL  ++      I AL    V    +++ALEL+     S       TF  +L
Sbjct: 393 NELTPKKAVLELMNLPQVEEIKAL----VQQGKYSQALELHSKTPHSALTTAKFTFPSLL 448

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDS 543
           K CA++++L  G+ IH   +      D ++ +++I+MY KCG +  A + F K+   RDS
Sbjct: 449 KTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDS 508

Query: 544 ---LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
              +  WN ++ GY ++G + E    F +M + G++PD  +   VL  C
Sbjct: 509 APDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGIC 557


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 215/683 (31%), Positives = 371/683 (54%), Gaps = 13/683 (1%)

Query: 83  TFSSLVKAC--GSLQENEIVHGVCLKLGFSSR-VYLVSGFIENYAKSGEIVSAEMCFRDC 139
           +F+SLV+     SLQ+   +H   +KL  SS  +YL +  I  YAK   +  A++ F   
Sbjct: 10  SFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRI 69

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKS--KEVFVEMRSLGLELNEFSLTAVLGASFDVKE--- 194
            + D +++  ++ GY   G    S   E+F  MR+  +  N  + + +  A+ ++     
Sbjct: 70  HNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFF 129

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+Q H   +K+     V   + ++++N+Y + G   +A ++FD + E + V+W+  I+  
Sbjct: 130 GQQAHAVAIKMACFYDV--FVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGY 187

Query: 255 CD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                  EAF +F+ +R  +  +NE+   ++LS++     + +GKQI     K G +  +
Sbjct: 188 AIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFL 247

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
           SI NAL++MY KCG ++D+  +F+    K+S++W++MI GY+++G  ++AL +F  M   
Sbjct: 248 SILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFA 307

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + P+ +T+  +L A S++ ++++  QVH++++K GF     +++ L+  Y K     ++
Sbjct: 308 GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDA 367

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           ++  + + + + V   ++ +  V    + +AL LY  +       N  T + VLKAC+ +
Sbjct: 368 RKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNL 427

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
              +QG+ IH   +K     ++ + SA+  MY KCG +E+    FR++    +  WNAM+
Sbjct: 428 AAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMI 487

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G +Q+G   E   LF +M +   KPD++T++ VL++C H GLV     Y   M D  GL
Sbjct: 488 SGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGL 547

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
           +P++EHYAC+VD+L R G L  AK  I+   I     +W+ LL AC  Y N +LG  AG 
Sbjct: 548 LPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGE 607

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           KL+EL     S YVLLS +Y + G   DV ++R  MK + + KEPG SWI +    H F 
Sbjct: 608 KLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFV 667

Query: 732 AGDSSHSQSKEIYKELIKLYEHM 754
            GD  H    EI  E+++L + M
Sbjct: 668 VGDQMHPCIGEIRTEILRLSKQM 690



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 193/668 (28%), Positives = 324/668 (48%), Gaps = 55/668 (8%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPA-----LKLFD 70
           L+ +LI+ + K     +A + +FD   N+D+I++N LI+G   + Q GP      ++LF 
Sbjct: 45  LANSLINFYAKCCHLPKA-KLVFDRIHNKDVISWNCLING---YSQQGPTGSSFVMELFQ 100

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           R+R   + P+A TFS +  A  +L      +  H V +K+     V++ S  +  Y K+G
Sbjct: 101 RMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAG 160

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            +  A   F    + + V +  M+ GY       ++ EVF  MR    ++NEF+ T+VL 
Sbjct: 161 LLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLS 220

Query: 188 A----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
           A     F V  G+QIH   VK G L  V   + NA++ +Y +CG   D++++F+   + +
Sbjct: 221 ALAVPEF-VDSGKQIHCLAVKTGLL--VFLSILNALVTMYAKCGSLDDSLQVFEMSNDKN 277

Query: 244 VVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
            ++WS  I   A + D  +A  LF  + F     +E+T++ +L++      +  GKQ+  
Sbjct: 278 SITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHN 337

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
           +  K+GF   + I  AL+ MY K G   DAR  F+YL   D V W SMIAGY +NG    
Sbjct: 338 YLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENED 397

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           AL ++C M    ++PN  TMAS+L+A SN  +  Q  Q+H+  IK G  L+ ++ S L T
Sbjct: 398 ALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALST 457

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y KC  L E   V   + +++ +  NA+ S L       EALEL+  +     + +  T
Sbjct: 458 MYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVT 517

Query: 481 FSIVLKACAAMTDLEQG---------------KAIH--CLA-LKAR----YDQDIFVESA 518
           F  VL AC+ M  ++ G               K  H  C+  + +R    Y+   F+ES 
Sbjct: 518 FVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIEST 577

Query: 519 VIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            ID   C    +  A R +R     + AG   M +G  +   Y  +S ++  +     +P
Sbjct: 578 TIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALG----RP 633

Query: 578 DEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           +++  +  +      G+ +E   +++   S++H  +   + + CI ++  R  +L  +K 
Sbjct: 634 EDVERVRSMMKV--RGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEI--RTEILRLSKQ 689

Query: 637 TIDQMPIP 644
             D+   P
Sbjct: 690 MKDEGYQP 697



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 161/296 (54%), Gaps = 15/296 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L +K G  +   +   L++ + K      + +    + +++ IT++A+I+G A+  
Sbjct: 233 QIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSG 292

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
            S  ALKLF R+ + G+ P  FT   ++ AC    +++E + VH   LKLGF S++Y+++
Sbjct: 293 DSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMT 352

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG    A   F      D V +T+M+ GYV NGE + +  ++  M+  G+  
Sbjct: 353 ALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILP 412

Query: 178 NEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           NE ++ +VL      A+FD  +G QIH   +K G   G+   + +A+  +Y +CG   + 
Sbjct: 413 NELTMASVLKACSNLAAFD--QGRQIHARTIKYGL--GLEVTIGSALSTMYAKCGNLEEG 468

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             +F  + E D++SW+  I+       G EA  LF+++R  D + ++ T +N+LS+
Sbjct: 469 NIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 11/296 (3%)

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS----MISCLITTYGKCNAL 428
           L P   +  + L   ++ KSL++   +H+ IIK   L   S    + + LI  Y KC  L
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIK---LASSSSCIYLANSLINFYAKCCHL 59

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEA--LELYRTIWGSCREVNGSTFSIVLK 486
            ++K V   I  K+ +  N L +          +  +EL++ +       N  TFS +  
Sbjct: 60  PKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFT 119

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           A + ++ +  G+  H +A+K     D+FV S++++MYCK G + +A+  F ++   +   
Sbjct: 120 AASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVT 179

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W  M+ GYA      E   +F  M +     +E  + +VL++      V   +  + C++
Sbjct: 180 WATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQ-IHCLA 238

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
              GL+  L     +V +  + G L+ + + + +M    ++  W ++++     G+
Sbjct: 239 VKTGLLVFLSILNALVTMYAKCGSLDDS-LQVFEMSNDKNSITWSAMITGYAQSGD 293


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 206/637 (32%), Positives = 337/637 (52%), Gaps = 13/637 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELN 178
           ++   K+G + +A   F      D +++T ++ GYV   +  ++  +F  MR   GL ++
Sbjct: 56  LKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRID 115

Query: 179 EFSLT---AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F L+      G + DV  GE +HG+ VK G ++ V   + +A++++Y + G+  +  ++
Sbjct: 116 PFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSV--FVGSALLDMYTKNGKIFEGRRV 173

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E+   +VVSW+  I     A    EA   F ++  +  + + YT    L +      L
Sbjct: 174 FHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGAL 233

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G++I A   K GF     + N L +MY KCG++    ++F+ +  +D VSW ++I   
Sbjct: 234 NYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTL 293

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G    A+  F  M E  + PN YT A+++   +N   ++   Q+H+ I+  G     
Sbjct: 294 VQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASL 353

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + ++T Y KC  L  S  +  E+ +++ V  + + +        +EA EL    W  
Sbjct: 354 SVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS--WMR 411

Query: 473 CREVNGSTFSI--VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 + F++  VL AC  M  LE GK +H   L    +    V SA+I+MYCKCG+IE
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIE 471

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A R F     D +  W AM+ GYA+HG   EV +LF K+ + G++PD +T++ VL++C 
Sbjct: 472 EASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACS 531

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGLV     Y + MS  + + P  EHY C++DLL R G L  A+  I+ MP   D  +W
Sbjct: 532 HAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVW 591

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL AC ++G+++ G     ++L+L+P+   T++ L+N+YAS G W +   +RK MK K
Sbjct: 592 STLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSK 651

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            + KEPG+SWI V      F AGD SH Q ++IY  L
Sbjct: 652 GVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNML 688



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 260/537 (48%), Gaps = 17/537 (3%)

Query: 36  RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACG- 92
           R +FD  + +D I++  LISG      S  AL LF  +R + GLR D F  S   KACG 
Sbjct: 69  RRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGL 128

Query: 93  --SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
              +   E++HG  +K G  + V++ S  ++ Y K+G+I      F +    + V++TA+
Sbjct: 129 NSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAI 188

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           + G V  G   ++   F EM    +E + ++    L A  D   +  G +IH   +K GF
Sbjct: 189 ITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGF 248

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVE--AFGLF 264
              V + + N +  +Y +CG+    + +F++++  DVVSW+  I      G E  A   F
Sbjct: 249 --DVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
             +R +D   NEYT   ++S       +  G+Q+ A    +G    +S+ N++++MY KC
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           GQ+  +  IF  +  +D VSW+++IAGYS+ G  ++A ++   M      P  + +AS+L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A  N   L+   Q+H++++  G      ++S LI  Y KC ++ E+ R+    +  + V
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCL 503
              A+ +         E ++L+  I       +  TF  VL AC+    ++ G +  + +
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAM 546

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHG 558
           + K +          +ID+ C+ G + DA+     +   RD +  W+ ++     HG
Sbjct: 547 SKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV-WSTLLRACRVHG 602



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K G      + + L+  +TK        R   +   R+++++ A+I+GL R   +  AL
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
             F  +    +  D++TF+  +KAC   G+L     +H   +K GF    ++ +     Y
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K G++      F      D V++T ++   V  G+ + + + F+ MR   +  NE++  
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322

Query: 184 AVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           AV+    +   ++ GEQ+H   + +G  + +   + N+IM +Y +CGQ   +  +F E+T
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLS--VENSIMTMYAKCGQLTSSSVIFHEMT 380

Query: 241 EPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             D+VSWS  IA    G    EAF L   +R    +  E+ + ++LS+ G   IL  GKQ
Sbjct: 381 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + A+   +G      + +ALI+MY KCG + +A  IFD     D VSW +MI GY+E+G+
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             + +D+F  +    L P+  T   +L A S++
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHA 533



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 245/539 (45%), Gaps = 55/539 (10%)

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND- 271
           +N  +   V+ G   +A +MFD++++ D +SW+  I+    A D  EA  LFK++R    
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            +I+ + +     + G    +  G+ +  +  K G +  V +G+AL+ MY K G++ + R
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F  +  ++ VSW ++I G    G+  +AL  F  M    +  + YT A  L+A ++S 
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L    ++H+  +K GF +   + + L T Y KC  L     +  ++  ++ V    + +
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
            LV       A++ +  +  S    N  TF+ V+  CA +  +E G+ +H L L      
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            + VE++++ MY KCG +  +   F ++ R  +  W+ ++ GY+Q G   E   L + M 
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR 411

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACI----VDLL 625
             G KP E    +VL++C +  ++   +        LH  +    LEH A +    +++ 
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGK-------QLHAYVLSIGLEHTAMVLSALINMY 464

Query: 626 GRVGLLEGAKMTID-------------------------------QMP---IPPDAHIWQ 651
            + G +E A    D                               ++P   + PD+  + 
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524

Query: 652 SLLSACTIYGNIDLGLL---AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +LSAC+  G +DLG     A SK  ++ P  E  Y  + +L   AG  +D   + + M
Sbjct: 525 GVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEH-YGCMIDLLCRAGRLSDAEHMIEAM 582



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 176/360 (48%), Gaps = 13/360 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +K G  +   ++ TL + + K                RD++++  +I+ L +  
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
           Q   A++ F R+R   + P+ +TF++++  C +L   +  E +H + L LG ++ + + +
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G++ S+ + F +    D V+++ ++ GY   G   ++ E+   MR  G + 
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKP 417

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            EF+L +VL A  +   ++ G+Q+H + + +G        + +A++N+Y +CG   +A +
Sbjct: 418 TEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM--VLSALINMYCKCGSIEEASR 475

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD     D+VSW+  I    +     E   LF+ +     + +  T I +LS+     +
Sbjct: 476 IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL 535

Query: 292 LRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMI 349
           +  G +   A   K            +I +  + G+++DA  + + + F +D V W++++
Sbjct: 536 VDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 237/732 (32%), Positives = 375/732 (51%), Gaps = 21/732 (2%)

Query: 32  RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R A +   +T  +DI  YN L+   +R      AL LF  L   GL  D  T S  +K C
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 92  GSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
           G L +  +   VH   LK GF   V + +  ++ Y K+ +       F +    + V++T
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKV 205
           +++ GY  NG  D+   +  +M+  G+  N F+   VLGA  D   ++ G Q+H   VK 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 206 GF--LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEA 260
           GF   + VCN    A++ +Y++     DA  +FD +   D V+W+  I   AA    +E 
Sbjct: 235 GFEFTTFVCN----ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           F +F  +R    +++       L     +R L   KQ+     K G+     I  AL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 321 YGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           Y KC  V++A  +F       + V+W +MI G+ +N    +A+D+FC M    + PN +T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFT 410

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            +++L    +S       Q+H+ IIK+ +    S+ + L+  Y K   + ES RV   I 
Sbjct: 411 YSTVLAGKPSS----LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA-MTDLEQGK 498
            K+ V  +A+ + L       +A+E++  +     + N  TFS V+ AC++    +E GK
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH  A+K+     + V SA++ MY K G IE A++ F +     +  WN+M+ GY QHG
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              +   +F  M   G+  D++T++ VLT+C HAGLV E   Y + M   + +  ++EHY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY 646

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
           +C+VDL  R G+ + A   I+ MP P    IW++LL+AC ++ N++LG LA  KL+ LQP
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           ++   YVLLSN++A AG W +   +RK M E+ + KE G SWI +      F AGD SH 
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 739 QSKEIYKELIKL 750
            S  +Y +L +L
Sbjct: 767 FSDLVYAKLEEL 778



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 268/545 (49%), Gaps = 20/545 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++   +K+G   D  + T+L+  + K  DF    R +FD    ++++++ +L+SG AR 
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDG-RGIFDEMGIKNVVSWTSLLSGYARN 183

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG--SLQENEI-VHGVCLKLGFSSRVYLV 116
             +   + L ++++ +G+ P+ FTF++++ A    S+ E  + VH + +K GF    ++ 
Sbjct: 184 GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVC 243

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y KS  +  AE  F   +  D+V +  M+ GY   G + +  ++F  MR  G++
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           L+       L      +E    +Q+H   VK G+       +  A+M  Y +C    +A 
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGY--EFAQDIRTALMVTYSKCSSVDEAF 361

Query: 234 KMFDEITEP-DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           K+F       +VV+W+  I       +  +A  LF  +     + N +T   +L+     
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            +     Q+ A   K  + +V S+  AL+  Y K G V ++  +F  +  KD V+W++M+
Sbjct: 422 LL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAML 477

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS-KSLKQAMQVHSHIIKSGF 408
            G ++     +A+++F  +++  + PN YT +S++ A S+S  +++   Q+H+  +KSG 
Sbjct: 478 TGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGK 537

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + S L+T Y K   +  +++V +  ++++ V  N++ +         +ALE+++ 
Sbjct: 538 SNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQI 597

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCG 527
           +      ++  TF  VL AC     +E+G+    + +K  + D+ I   S ++D+Y + G
Sbjct: 598 MQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAG 657

Query: 528 TIEDA 532
             + A
Sbjct: 658 MFDKA 662



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 140/262 (53%), Gaps = 8/262 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IK  +   P ++T L+  + K  +   + R  +    +DI+ ++A+++GLA+  
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTR 484

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
            S  A+++F +L  +G++P+ +TFSS++ AC S    ++  + +H   +K G S+ + + 
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y+K G I SAE  F    + D V++ +M+ GY  +G+  K+ EVF  M++ GL 
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLP 604

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           L++ +   VL A      V+EGE+     +K   +     H  + +++LY R G    A+
Sbjct: 605 LDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY-SCMVDLYSRAGMFDKAM 663

Query: 234 KMFDEITEPDVVSWSERIAAAC 255
            + + +  P   +    + AAC
Sbjct: 664 DIINGMPFPASPTIWRTLLAAC 685


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 238/756 (31%), Positives = 388/756 (51%), Gaps = 35/756 (4%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
            ++   +K G   D  ++  L++ + KF   R A R LFD    RD++ +N ++       
Sbjct: 749  LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREA-RVLFDGMGLRDVVLWNVMMKAYVDTG 807

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
                AL LF      GLRPD  T  +L +   S Q   ++     +L    + Y    F+
Sbjct: 808  LEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQN--VLEWQLKQL----KAYGTKLFM 861

Query: 121  ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             +    G               D +A+   +  ++  GE  ++ + FV+M +  +  +  
Sbjct: 862  YDDDDDGS--------------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGL 907

Query: 181  SLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
            +   +L   A  +  E G+QIHG  V+ G    V   + N ++N+YV+ G    A  +F 
Sbjct: 908  TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVS--VGNCLINMYVKTGSVSRARTVFW 965

Query: 238  EITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLL---SSVGGERI 291
            ++ E D+VSW+  I+  A  G+E  + G+F DL       +++T+ ++L   SS+GG   
Sbjct: 966  QMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCH 1025

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L    QI A   K G +    +   LI +Y K G++ +A  +F      D  SWN+M+ G
Sbjct: 1026 L--ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHG 1083

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            Y  +G F +AL ++  M E     N  T+A+  +A      LKQ  Q+ + ++K GF LD
Sbjct: 1084 YIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLD 1143

Query: 412  DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
              +IS ++  Y KC  +  ++R+ +EI   + V    + S  V       AL  Y  +  
Sbjct: 1144 LFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRL 1203

Query: 472  SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
            S  + +  TF+ ++KAC+ +T LEQG+ IH   +K     D FV ++++DMY KCG IED
Sbjct: 1204 SKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIED 1263

Query: 532  AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            A+  F++     +A WNAM++G AQHG   E    F +M   GV PD +T++ VL++C H
Sbjct: 1264 ARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSH 1323

Query: 592  AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            +GLV EA      M  ++G+ P++EHY+C+VD L R G +  A+  I  MP    A +++
Sbjct: 1324 SGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYR 1383

Query: 652  SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +LL+AC +  + + G     KLL L+P + + YVLLSN+YA+A  W +V   R  M++  
Sbjct: 1384 TLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKAN 1443

Query: 712  LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            + K+PG+SW+ +    H F AGD SH ++  IY ++
Sbjct: 1444 VKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1479



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 187/689 (27%), Positives = 318/689 (46%), Gaps = 61/689 (8%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ---NRDIITYNALISGLA 57
            + ++ ++ +GHH D  L+  LI+ ++K      A R LFDT    +RD++T+NA++S  A
Sbjct: 647  RAHARILTSGHHPDRFLTNNLITMYSKCGSLSSA-RKLFDTTPDTSRDLVTWNAILSAHA 705

Query: 58   RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
               + G    LF  LR   +     T + + K C    S    E +HG  +K+G    V+
Sbjct: 706  DKARDG--FHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVF 763

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +    +  YAK G I  A + F      D V +  M+  YV  G   ++  +F E    G
Sbjct: 764  VAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG 823

Query: 175  LELNEF---SLTAVLGASFDVKEGE--QIHGFGVKVGFLSGVCNHLN----NAIMNLYVR 225
            L  ++    +L  V+ +  +V E +  Q+  +G K+       +  +    N  ++ +++
Sbjct: 824  LRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQ 883

Query: 226  CGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             G+  +AV  F ++    V         ACDG+                   T + +LS 
Sbjct: 884  RGETWEAVDCFVDMINSRV---------ACDGL-------------------TFVVMLSV 915

Query: 286  VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
            V G   L  GKQI     + G  +VVS+GN LI+MY K G V+ AR++F  +   D VSW
Sbjct: 916  VAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSW 975

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVHSHII 404
            N+MI+G + +G    ++ MF  +L   L+P+ +T+AS+L A S+       A Q+H+  +
Sbjct: 976  NTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAM 1035

Query: 405  KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
            K+G +LD  + + LI  Y K   + E++ +    D  +    NA+    + +    +AL 
Sbjct: 1036 KAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALR 1095

Query: 465  LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
            LY  +  S    N  T +   KA   +  L+QGK I  + +K  ++ D+FV S V+DMY 
Sbjct: 1096 LYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYL 1155

Query: 525  KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            KCG +E A+R F +I       W  M+ G  ++G        ++ M    V+PDE T+  
Sbjct: 1156 KCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFAT 1215

Query: 585  VLTSCCHAGLVREAR------TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
            ++ +C     + + R        L+C  D   +         +VD+  + G +E A+   
Sbjct: 1216 LVKACSLLTALEQGRQIHANTVKLNCAFDPFVM-------TSLVDMYAKCGNIEDARGLF 1268

Query: 639  DQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             +      A  W +++     +GN +  L
Sbjct: 1269 KRTNTSRIAS-WNAMIVGLAQHGNAEEAL 1296



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 275/610 (45%), Gaps = 71/610 (11%)

Query: 1    QIYSLLIKNGHHLDPILSTT--LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
            QI+ +++++G  LD ++S    LI+ + K     RA    +     D++++N +ISG A 
Sbjct: 927  QIHGIVVRSG--LDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL 984

Query: 59   FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRVY 114
                  ++ +F  L   GL PD FT +S+++AC SL         +H   +K G     +
Sbjct: 985  SGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF 1044

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            + +  I+ Y+KSG++  AE  F +    D  ++ AM+ GY+ +G+F K+  +++ M+  G
Sbjct: 1045 VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104

Query: 175  LELNEFSL---TAVLGASFDVKEGEQIHGFGVKVGF------LSGVCNHLNNAIMNLYVR 225
               N+ +L       G    +K+G+QI    VK GF      +SGV        +++Y++
Sbjct: 1105 ERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGV--------LDMYLK 1156

Query: 226  CGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVEAFGLFK--DLRFNDFQINEYTMINL 282
            CG+   A ++F+EI  PD V+W+  I+   + G E   LF    +R +  Q +EYT   L
Sbjct: 1157 CGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATL 1216

Query: 283  LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
            + +      L  G+QI A   K+       +  +L+ MY KCG + DAR +F        
Sbjct: 1217 VKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRI 1276

Query: 343  VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
             SWN+MI G +++G   +AL  F  M    + P+  T   +L A S+S  + +A +    
Sbjct: 1277 ASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYS 1336

Query: 403  IIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            + K  G   +    SCL+    +   + E+++V+S      ++   A AS          
Sbjct: 1337 MQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVIS------SMPFEASAS---------- 1380

Query: 462  ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAV 519
               +YRT+               L AC    D E GK +    LAL+        + S V
Sbjct: 1381 ---MYRTL---------------LNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNV 1422

Query: 520  IDMYCKCGTIEDAKRAFRK--ICRDSLAGW----NAMMMGYAQHGCYHEVSNLFNKMSKF 573
                 +   +  A+   RK  + +D    W    N + +  A    + E   ++NK+   
Sbjct: 1423 YAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYI 1482

Query: 574  GVKPDEITYL 583
              +  E  YL
Sbjct: 1483 MKRIREEGYL 1492



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 4/202 (1%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-- 439
           SIL     +  L    + H+ I+ SG   D  + + LIT Y KC +L+ ++++       
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
            ++ V  NA+ S   +A    +   L+R +  S       T + V K C         ++
Sbjct: 691 SRDLVTWNAILS--AHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H  A+K     D+FV  A++++Y K G I +A+  F  +    +  WN MM  Y   G 
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808

Query: 560 YHEVSNLFNKMSKFGVKPDEIT 581
            +E   LF++ ++ G++PD++T
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVT 830



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 154/381 (40%), Gaps = 47/381 (12%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMI 349
           L  GK+  A     G      + N LI+MY KCG ++ AR +FD      +D V+WN+++
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701

Query: 350 AGYSENGFFNQALDMF--CHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           + +++     +A D F    +L  S +    +T+A + +    S S   A  +H + +K 
Sbjct: 702 SAHAD-----KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKI 756

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G   D  +   L+  Y K   + E++ +   +  ++ V  N +    V      EAL L+
Sbjct: 757 GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLF 816

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
                +    +  T   + +   +  ++ + +      LKA Y   +F       MY   
Sbjct: 817 SEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQ---LKA-YGTKLF-------MYDDD 865

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
               D            +  WN  +  + Q G   E  + F  M    V  D +T++ +L
Sbjct: 866 DDGSD------------VIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVML 913

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYA----CIVDLLGRVGLLEGAKMTIDQ 640
           +    AGL       L     +HG++ +  L+       C++++  + G +  A+    Q
Sbjct: 914 SVV--AGL-----NCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966

Query: 641 MPIPPDAHIWQSLLSACTIYG 661
           M    D   W +++S C + G
Sbjct: 967 MN-EVDLVSWNTMISGCALSG 986


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 206/637 (32%), Positives = 337/637 (52%), Gaps = 13/637 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELN 178
           ++   K+G + +A   F      D +++T ++ GYV   +  ++  +F  MR   GL ++
Sbjct: 56  LKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRID 115

Query: 179 EFSLT---AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F L+      G + DV  GE +HG+ VK G ++ V   + +A++++Y + G+  +  ++
Sbjct: 116 PFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSV--FVGSALLDMYTKNGKIFEGRRV 173

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E+   +VVSW+  I     A    EA   F ++  +  + + YT    L +      L
Sbjct: 174 FHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGAL 233

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G++I A   K GF     + N L +MY KCG++    ++F+ +  +D VSW ++I   
Sbjct: 234 NYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTL 293

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G    A+  F  M E  + PN YT A+++   +N   ++   Q+H+ I+  G     
Sbjct: 294 VQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASL 353

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + ++T Y KC  L  S  +  E+ +++ V  + + +        +EA EL    W  
Sbjct: 354 SVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLS--WMR 411

Query: 473 CREVNGSTFSI--VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 + F++  VL AC  M  LE GK +H   L    +    V SA+I+MYCKCG+IE
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIE 471

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A R F     D +  W AM+ GYA+HG   EV +LF K+ + G++PD +T++ VL++C 
Sbjct: 472 EASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACS 531

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGLV     Y + MS  + + P  EHY C++DLL R G L  A+  I+ MP   D  +W
Sbjct: 532 HAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVW 591

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL AC ++G+++ G     ++L+L+P+   T++ L+N+YAS G W +   +RK MK K
Sbjct: 592 STLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSK 651

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            + KEPG+SWI V      F AGD SH Q ++IY  L
Sbjct: 652 GVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNML 688



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 259/541 (47%), Gaps = 25/541 (4%)

Query: 36  RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACG- 92
           R +FD  + +D I++  LISG      S  AL LF  +R + GLR D F  S   KACG 
Sbjct: 69  RRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGL 128

Query: 93  --SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
              +   E++HG  +K G  + V++ S  ++ Y K+G+I      F +    + V++TA+
Sbjct: 129 NSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAI 188

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           + G V  G   ++   F EM    +E + ++    L A  D   +  G +IH   +K GF
Sbjct: 189 ITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGF 248

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVE--AFGLF 264
              V + + N +  +Y +CG+    + +F++++  DVVSW+  I      G E  A   F
Sbjct: 249 --DVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAF 306

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
             +R +D   NEYT   ++S       +  G+Q+ A    +G    +S+ N++++MY KC
Sbjct: 307 IRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKC 366

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           GQ+  +  IF  +  +D VSW+++IAGY + G  ++A ++   M      P  + +AS+L
Sbjct: 367 GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVL 426

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A  N   L+   Q+H++++  G      ++S LI  Y KC ++ E+ R+    +  + V
Sbjct: 427 SACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIV 486

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHC 502
              A+ +         E ++L+  I       +  TF  VL AC  A + DL      H 
Sbjct: 487 SWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDL----GFHY 542

Query: 503 L-ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQH 557
             A+  +Y      E    +ID+ C+ G + DA+     +   RD +  W+ ++     H
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV-WSTLLRACRVH 601

Query: 558 G 558
           G
Sbjct: 602 G 602



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K G      + + L+  +TK        R   +   R+++++ A+I+GL R   +  AL
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
             F  +    +  D++TF+  +KAC   G+L     +H   +K GF    ++ +     Y
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMY 262

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K G++      F      D V++T ++   V  G+ + + + F+ MR   +  NE++  
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFA 322

Query: 184 AVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           AV+    +   ++ GEQ+H   + +G  + +   + N+IM +Y +CGQ   +  +F E+T
Sbjct: 323 AVISGCANLARIEWGEQLHALILHLGLAASLS--VENSIMTMYAKCGQLTSSSVIFHEMT 380

Query: 241 EPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             D+VSWS  IA    G    EAF L   +R    +  E+ + ++LS+ G   IL  GKQ
Sbjct: 381 RRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + A+   +G      + +ALI+MY KCG + +A  IFD     D VSW +MI GY+E+G+
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             + +D+F  +    L P+  T   +L A S++
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHA 533



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 244/539 (45%), Gaps = 55/539 (10%)

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND- 271
           +N  +   V+ G   +A +MFD++++ D +SW+  I+    A D  EA  LFK++R    
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            +I+ + +     + G    +  G+ +  +  K G +  V +G+AL+ MY K G++ + R
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F  +  ++ VSW ++I G    G+  +AL  F  M    +  + YT A  L+A ++S 
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L    ++H+  +K GF +   + + L T Y KC  L     +  ++  ++ V    + +
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
            LV       A++ +  +  S    N  TF+ V+  CA +  +E G+ +H L L      
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            + VE++++ MY KCG +  +   F ++ R  +  W+ ++ GY Q G   E   L + M 
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMR 411

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACI----VDLL 625
             G KP E    +VL++C +  ++   +        LH  +    LEH A +    +++ 
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGK-------QLHAYVLSIGLEHTAMVLSALINMY 464

Query: 626 GRVGLLEGAKMTID-------------------------------QMP---IPPDAHIWQ 651
            + G +E A    D                               ++P   + PD+  + 
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524

Query: 652 SLLSACTIYGNIDLGLL---AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +LSAC+  G +DLG     A SK  ++ P  E  Y  + +L   AG  +D   + + M
Sbjct: 525 GVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEH-YGCMIDLLCRAGRLSDAEHMIEAM 582



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++  +K G  +   ++ TL + + K                RD++++  +I+ L +  
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
           Q   A++ F R+R   + P+ +TF++++  C +L   +  E +H + L LG ++ + + +
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G++ S+ + F +    D V+++ ++ GY   G   ++ E+   MR  G + 
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKP 417

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            EF+L +VL A  +   ++ G+Q+H + + +G        + +A++N+Y +CG   +A +
Sbjct: 418 TEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM--VLSALINMYCKCGSIEEASR 475

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD     D+VSW+  I    +     E   LF+ +     + +  T I +LS+     +
Sbjct: 476 IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL 535

Query: 292 LRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMI 349
           +  G     A   K            +I +  + G+++DA  + + + F +D V W++++
Sbjct: 536 VDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 242/786 (30%), Positives = 411/786 (52%), Gaps = 42/786 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+ L+ K  +  D ++   LIS +    D     R +FD    R+ I++N++IS  +R 
Sbjct: 195 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRR 254

Query: 60  CQSGPALKLFDRLRYQGL----RPDAFTFSSLVK-ACGSLQENEIVHGVCL--------- 105
             +  A  LF  ++ +GL    +P+ +TF SL+  AC S+       G+C+         
Sbjct: 255 GDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVD-----FGLCVLEQMLARVE 309

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K GF   +Y+ S  +  +A+ G    A+  F      + V+   ++ G V   + + + +
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 369

Query: 166 VFVEMRSLGLELNEFSLTAVLGA--SFDV-----KEGEQIHGFGVKVGFLSGVCNHLNNA 218
           VF EM+ L + +N  S   +L A   F V     ++G ++H   ++ G L+     + N 
Sbjct: 370 VFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG-LNDNKVAIGNG 427

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDF 272
           ++N+Y + G   DA  +F+ + E D VSW+  I+       + D  E+F     +R    
Sbjct: 428 LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESF---HRMRRTGS 484

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             + +T+I+ LSS      +  G+QI     K+G    VS+ NAL+++Y + G   +   
Sbjct: 485 MPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLK 544

Query: 333 IFDYLIFKDSVSWNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           +F  +   D VSWNS+I   S++    +QA+  F  M+      +  T  +IL AVS+  
Sbjct: 545 VFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLS 604

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALA 450
             + + Q+H+ ++K     D ++ + L++ YGKC  +NE +++ + + + ++ V  N++ 
Sbjct: 605 LHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 664

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S  ++     +A++L   +    + ++  TF+ +L ACA++  LE+G  +H   ++A  +
Sbjct: 665 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 724

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            D+ V SA++DMY KCG I+ A R F  +   ++  WN+M+ GYA+HG   +   LF +M
Sbjct: 725 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 784

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              G  PD +T++ VL++C H G V E   +   MS+++ L P++EH++C+VDLLGR G 
Sbjct: 785 MLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGK 844

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLS 688
           L+     I+ MP+ P+  IW+++L AC      N +LG  A   LLEL+P N   YVLL+
Sbjct: 845 LDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 904

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YAS   W DV K R  MKE  + KE G SW+ +    H F AGD  H +   IY +L 
Sbjct: 905 NMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLR 964

Query: 749 KLYEHM 754
           +L   M
Sbjct: 965 ELNRKM 970



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 178/717 (24%), Positives = 336/717 (46%), Gaps = 55/717 (7%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G   +  LS TLI+ + +  D   A +   +  NR+++T+  LISG  +  +   A 
Sbjct: 98  IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 157

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--------VHGVCLKLGFSSRVYLVSG 118
             F  +   G  P+ + F S ++AC   QE+          +HG+  K  + S V + + 
Sbjct: 158 ARFRDMVRAGFIPNHYAFGSALRAC---QESGPSGCKLGVQIHGLISKTRYGSDVVVCNV 214

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-- 175
            I  Y    +  +      D + + N +++ +++  Y   G+   + ++F  M+  GL  
Sbjct: 215 LISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGF 274

Query: 176 --ELNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
             + NE++      TA     F +   EQ+     K GFL  +  ++++A+++ + R G 
Sbjct: 275 SFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDL--YVSSALVSGFARFGL 332

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA  +F+++   +VVS +  +        G  A  +F +++ +   IN  + + LLS+
Sbjct: 333 TDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSA 391

Query: 286 VGGERIL----RAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
                +L    R G+++ A   + G  +  V+IGN L++MY K G + DA S+F+ ++ K
Sbjct: 392 FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 451

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           DSVSWNS+I+G  +N     A + F  M     +P+ +T+ S L + ++   +    Q+H
Sbjct: 452 DSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 511

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              +K G   D S+ + L+  Y +     E  +V S + + + V  N++   L  +    
Sbjct: 512 CDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASV 571

Query: 461 EA-----LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                  L++ R  WG  R     TF  +L A ++++  E    IH L LK     D  +
Sbjct: 572 SQAVKYFLQMMRGGWGLSR----VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAI 627

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            +A++  Y KCG + + ++ F ++   RD ++ WN+M+ GY  +   H+  +L   M + 
Sbjct: 628 GNALLSCYGKCGEMNECEKIFARMSETRDEVS-WNSMISGYIHNELLHKAMDLVWFMMQK 686

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY----ACIVDLLGRVG 629
           G + D  T+  +L++C     +       +C     G+   LE      + +VD+  + G
Sbjct: 687 GQRLDSFTFATILSACASVATLERGMEVHAC-----GIRACLESDVVVGSALVDMYSKCG 741

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYV 685
            ++ A    + MP+  + + W S++S    +G+ +  L L    +L+ QP +  T+V
Sbjct: 742 RIDYASRFFELMPL-RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFV 797



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 255/533 (47%), Gaps = 33/533 (6%)

Query: 83  TFSSLVK----ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           TF SL+     +C S +  E+ H   +K GF   ++L +  I  Y + G++ SA+  F +
Sbjct: 73  TFESLINRYQGSCCSEEAREL-HLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDE 131

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-----VK 193
             + + V +  ++ GY  NG+ D++   F +M   G   N ++  + L A  +      K
Sbjct: 132 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 191

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC-GQKLDAVKMFDEITEPDVVSWSERIA 252
            G QIHG   K  + S V   + N ++++Y  C     DA  +FD I   + +SW+  I+
Sbjct: 192 LGVQIHGLISKTRYGSDVV--VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 249

Query: 253 AAC---DGVEAFGLFKDLRFN----DFQINEYTMINLLSSVGG--ERILRAGKQIQAFCY 303
                 D V A+ LF  ++       F+ NEYT  +L+++     +  L   +Q+ A   
Sbjct: 250 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVE 309

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K GF++ + + +AL+S + + G  +DA++IF+ +  ++ VS N ++ G  +      A  
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 369

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSL----KQAMQVHSHIIKSGFLLDDSMISC-- 417
           +F  M +   I N  +   +L A S    L    ++  +VH+H+I++G  L+D+ ++   
Sbjct: 370 VFHEMKDLVGI-NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG--LNDNKVAIGN 426

Query: 418 -LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+  Y K  A+ ++  V   + +K++V  N+L S L    C  +A E +  +  +    
Sbjct: 427 GLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMP 486

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +  T    L +CA++  +  G+ IHC  LK   D D+ V +A++ +Y + G   +  + F
Sbjct: 487 SNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVF 546

Query: 537 RKICRDSLAGWNAMMMGYAQ-HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
             +       WN+++   +       +    F +M + G     +T++ +L++
Sbjct: 547 SLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA 599



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 166/335 (49%), Gaps = 18/335 (5%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  +L++   G       +++     K GF+  + + N LI++Y + G +  A+ +FD +
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS--KSLKQ 395
             ++ V+W  +I+GY++NG  ++A   F  M+    IPN Y   S L A   S     K 
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKRVLSEIDKKNAVHINALASVLV 454
            +Q+H  I K+ +  D  + + LI+ YG C ++ N+++ V   I  +N++  N++ SV  
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252

Query: 455 YASCHAEALELYRTI----WGSCREVNGSTF-SIVLKACAA----MTDLEQGKAIHCLAL 505
                  A +L+ ++     G   + N  TF S++  AC++    +  LEQ  A      
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLA---RVE 309

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+ + QD++V SA++  + + G  +DAK  F ++   ++   N +M+G  +       + 
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 369

Query: 566 LFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREAR 599
           +F++M    G+  D  +Y+ +L++     ++ E R
Sbjct: 370 VFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGR 402



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 12/282 (4%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           +L  +  T  S++     S   ++A ++H   IK GF+ +  + + LI  Y +   L  +
Sbjct: 66  TLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSA 125

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--A 489
           +++  E+  +N V    L S         EA   +R +  +    N   F   L+AC  +
Sbjct: 126 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 185

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWN 548
             +  + G  IH L  K RY  D+ V + +I MY  C  +  DA+  F  I   +   WN
Sbjct: 186 GPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWN 245

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSK----FGVKPDEITYLAVLTSCCHA---GLVREARTY 601
           +++  Y++ G      +LF+ M K    F  KP+E T+ +++T+ C +   GL       
Sbjct: 246 SIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLC--VLEQ 303

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           +    +  G +  L   + +V    R GL + AK   +QM +
Sbjct: 304 MLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGV 345


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 204/555 (36%), Positives = 314/555 (56%), Gaps = 24/555 (4%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQ 273
           N+++++  + G   +A ++F  + EPD  SW+  ++  A  D  E +   F  +   DF 
Sbjct: 85  NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +NEY+  + LS+  G   L  G Q+ A   K  +   V +G+ALI MY KCG V  A  +
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +I ++ V+WNS+I  Y +NG  ++AL++F  M++  L P+  T+AS++ A ++  +L
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCAL 264

Query: 394 KQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           K+ +Q+H+ ++K+    DD ++ + L+  Y KC+ +NE++RV   +  +N V   ++ S 
Sbjct: 265 KEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS- 323

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR---- 508
                  A +++  R ++    + N  +++ ++       + E  +A+    L  R    
Sbjct: 324 ---GYARAASVKAARFMFSKMTQRNVVSWNALI--AGYTQNGENEEALRLFRLLKRESIW 378

Query: 509 ---------YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
                       DIFV +++IDMY KCG+IED  R F K+       WNA+++GYAQ+G 
Sbjct: 379 PTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGY 438

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             E   +F KM   G KPD +T + VL +C HAGLV E R Y   M + HGLIP  +HY 
Sbjct: 439 GAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYT 497

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           C+VDLLGR G L  AK  I+ MP+ PDA +W SLL+AC ++GNI++G  A  KLLE+ P 
Sbjct: 498 CMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPW 557

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
           N   YVLLSN+YA  G W DV ++RK M+++ + K+PG SWI V    H F   D SH  
Sbjct: 558 NSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPH 617

Query: 740 SKEIYKELIKLYEHM 754
            K+IY  L  L E M
Sbjct: 618 RKQIYSVLKMLTEQM 632



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 249/565 (44%), Gaps = 105/565 (18%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            +LIS  TK      A R        D  ++N+++SG A+  +   +L+ F ++  +   
Sbjct: 85  NSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFL 144

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + ++F S + AC  L +  +   VH +  K  +S+ VY+ S  I+ Y+K G +  AE  
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
           F   ++ + V + +++  Y  NG   ++ EVFV M   GLE +E +L +V+ A      +
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCAL 264

Query: 193 KEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-------------- 237
           KEG QIH   VK   F   +   L NA++++Y +C +  +A ++FD              
Sbjct: 265 KEGLQIHARVVKTNKFRDDLV--LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMV 322

Query: 238 -----------------EITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEY 277
                            ++T+ +VVSW+  IA      +  EA  LF+ L+        Y
Sbjct: 323 SGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHY 382

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  NLL S                         + +GN+LI MY KCG + D   +F+ +
Sbjct: 383 TFGNLLKS------------------------DIFVGNSLIDMYMKCGSIEDGSRVFEKM 418

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D VSWN++I GY++NG+  +AL +F  ML     P+  TM  +L A S++  +++  
Sbjct: 419 KERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR 478

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
                + + G +      +C++   G+   LNE+K ++       A+ +N  A       
Sbjct: 479 HYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLI------EAMPVNPDA------- 525

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVE 516
                      +WGS           +L AC    ++E GK A   L     ++   +V 
Sbjct: 526 ----------VVWGS-----------LLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYV- 563

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICR 541
             + +MY + G   D  R  RK+ R
Sbjct: 564 -LLSNMYAELGRWGDVVRV-RKLMR 586



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 240/539 (44%), Gaps = 71/539 (13%)

Query: 79  PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---------- 125
           P++  F+ L+ +C    S +   +VH   L   FS  +++ +  I+ Y K          
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 126 ---------------------SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
                                SG +  A   F    + D  ++ +MV G+  +  F++S 
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 165 EVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           E FV+M      LNE+S  + L A     D+  G Q+H    K  + + V  ++ +A+++
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDV--YMGSALID 190

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWS------ERIAAACDGVEAFGLFKDLRFNDFQIN 275
           +Y +CG    A ++F  + E ++V+W+      E+   A + +E F    D   +  + +
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD---SGLEPD 247

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIF 334
           E T+ +++S+      L+ G QI A   K   F + + +GNAL+ MY KC +VN+AR +F
Sbjct: 248 EVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVF 307

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP-----NGYTM-ASILEAVS 388
           D +  ++ VS  SM++GY+       A  MF  M + +++       GYT      EA+ 
Sbjct: 308 DRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALR 367

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
             + LK+     +H      L  D  + + LI  Y KC ++ +  RV  ++ +++ V  N
Sbjct: 368 LFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWN 427

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH------ 501
           A+          AEAL+++R +     + +  T   VL AC+    +E+G+         
Sbjct: 428 AIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH 487

Query: 502 -CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHG 558
             + LK  Y       + ++D+  + G + +AK     +  +  A  W +++     HG
Sbjct: 488 GLIPLKDHY-------TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 539



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 67/390 (17%)

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
           GL +DL    +  N      LL S    R  R  + + A      F   + I N LI +Y
Sbjct: 5   GLVRDL----YLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60

Query: 322 GKCGQVNDARSIFDYLIFK-------------------------------DSVSWNSMIA 350
           GKC  ++DAR +FD +  +                               D  SWNSM++
Sbjct: 61  GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G++++  F ++L+ F  M     + N Y+  S L A +    L    QVH+ + KS +  
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  M S LI  Y KC ++  ++ V S + ++N V  N+L +        +EALE++  + 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTI 529
            S  E +  T + V+ ACA++  L++G  IH   +K  ++  D+ + +A++DMY KC  +
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300

Query: 530 EDAKRA-------------------------------FRKICRDSLAGWNAMMMGYAQHG 558
            +A+R                                F K+ + ++  WNA++ GY Q+G
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
              E   LF  + +  + P   T+  +L S
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLKS 390



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 179/380 (47%), Gaps = 32/380 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L+ K+ +  D  + + LI  ++K      A         R+++T+N+LI+    + 
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITC---YE 224

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLG-FSSRV 113
           Q+GP   AL++F R+   GL PD  T +S+V AC S   L+E   +H   +K   F   +
Sbjct: 225 QNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDL 284

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            L +  ++ YAK  ++  A   F D + + N V+ T+MV GY        ++ +F +M  
Sbjct: 285 VLGNALVDMYAKCSKVNEARRVF-DRMSIRNVVSETSMVSGYARAASVKAARFMFSKM-- 341

Query: 173 LGLELNEFSLTAVLGAS------------FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
              + N  S  A++               F + + E I       G L      + N+++
Sbjct: 342 --TQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLI 399

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEY 277
           ++Y++CG   D  ++F+++ E D VSW+  I        G EA  +F+ +     + +  
Sbjct: 400 DMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHV 459

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           TMI +L +     ++  G+       + G + +      ++ + G+ G +N+A+++ + +
Sbjct: 460 TMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAM 519

Query: 338 -IFKDSVSWNSMIAGYSENG 356
            +  D+V W S++A    +G
Sbjct: 520 PVNPDAVVWGSLLAACKVHG 539



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 47/242 (19%)

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N S F+ +L +C         + +H   L  ++  +IF+++ +ID+Y KC  ++DA++ F
Sbjct: 14  NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73

Query: 537 RKICR-------------------DSLA------------GWNAMMMGYAQHGCYHEVSN 565
            ++ +                   D  A             WN+M+ G+AQH  + E   
Sbjct: 74  DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------A 619
            F KM +     +E ++ + L++C  AGL+      L+  + +H L+ +  +       +
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSAC--AGLMD-----LNMGTQVHALVSKSRYSTDVYMGS 186

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQ 677
            ++D+  + G +  A+     M I  +   W SL++     G     L    ++++  L+
Sbjct: 187 ALIDMYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245

Query: 678 PD 679
           PD
Sbjct: 246 PD 247


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 232/720 (32%), Positives = 372/720 (51%), Gaps = 18/720 (2%)

Query: 50  NALISGLARFCQSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCL 105
           N  I+ L R      AL+ FD   +    +    T+ SL+ AC S   L +   +H   L
Sbjct: 32  NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
                    L +  +  Y K G +  A   F    + + V+YT+++ GY  NG+  ++  
Sbjct: 92  NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151

Query: 166 VFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHL--NNAIM 220
           ++++M    L  ++F+  +++ A   + DV  G+Q+H   +K+   S    HL   NA++
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSS----HLIAQNALI 207

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKD-LRFNDFQINE 276
            +YVR  Q  DA K+F  I   D++SWS  IA         EA    K+ L F  F  NE
Sbjct: 208 AMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNE 267

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           Y   + L +         G QI   C K+        G +L  MY +CG ++ AR +F+ 
Sbjct: 268 YIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQ 327

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +   D+ SWN +IAG + NG+ ++A+ +F  M     IP+  ++ S+L A +   +L Q 
Sbjct: 328 IERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQG 387

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVY 455
           MQ+HS IIK GFL D S+ + L+T Y  C+ L     +  +  +K ++V  NA+ +  + 
Sbjct: 388 MQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQ 447

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                E L L++ +  S  E +  T   +L+ C  ++ L+ G  +HC + K     + F+
Sbjct: 448 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFI 507

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
           ++ +IDMY KCG++  A+R F  +    +  W+ +++GYAQ G   E   LF +M   G+
Sbjct: 508 KNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGI 567

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           +P+ +T++ VLT+C H GLV E     + M   HG+ P  EH +C+VDLL R G L  A+
Sbjct: 568 EPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAE 627

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
             ID+M + PD  +W++LLSAC   GN+DL   A   +L++ P N + +VLL +++AS+G
Sbjct: 628 RFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSG 687

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            W D   LR  MK+  + K PG SWI V    H F+A D  H +  +IY  L  ++  M+
Sbjct: 688 NWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHPERDDIYTVLHNIWSQML 747



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 275/554 (49%), Gaps = 30/554 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+  ++ +    D IL+  ++S + K    R A R +FD    R++++Y ++I+G ++ 
Sbjct: 85  KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDA-REVFDFMPERNLVSYTSVITGYSQN 143

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            Q   A+ L+ ++    L PD F F S++KAC   G +   + +H   +KL  SS +   
Sbjct: 144 GQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQ 203

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG-EFDKSKEVFVEMRSLGL 175
           +  I  Y +  ++  A   F      D +++++++ G+   G EF+    +  EM S G+
Sbjct: 204 NALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHL-KEMLSFGV 262

Query: 176 -ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIM-----NLYVRC 226
              NE+   + L A   +     G QIHG  +K+  L+G      NAI      ++Y RC
Sbjct: 263 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLE-LTG------NAIAGCSLCDMYARC 315

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
           G    A ++F++I  PD  SW+  IA   +     EA  +F ++R + F  +  ++ +LL
Sbjct: 316 GFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLL 375

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDS 342
            +      L  G QI +F  K GF+  +S+ N+L++MY  C  +    ++F D+    DS
Sbjct: 376 CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADS 435

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN+++    ++    + L +F  ML     P+  TM ++L       SLK   QVH +
Sbjct: 436 VSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 495

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
             K+G +L+  + + LI  Y KC +L +++R+   +D  + V  + L      +    EA
Sbjct: 496 SWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEA 555

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           L L+R +  S  E N  TF  VL AC+ +  +E+G  ++ + ++  +      E  S V+
Sbjct: 556 LILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAI-MQTEHGISPTKEHCSCVV 614

Query: 521 DMYCKCGTIEDAKR 534
           D+  + G + +A+R
Sbjct: 615 DLLARAGHLNEAER 628


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 231/798 (28%), Positives = 381/798 (47%), Gaps = 81/798 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+ NG  +   L + L+  + +      A R       R++ ++ A++       
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                +KLF  +  +G+RPD F F  + KAC  L+   +   V+   L +GF     +  
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ + K G +  A   F +    D   +  MV GY   GEF K+ +   +M+  G++ 
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++ +                                   NAI++ Y + GQ  +A K F 
Sbjct: 290 DQVTW----------------------------------NAIISGYAQSGQFEEASKYFL 315

Query: 238 EIT-----EPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           E+      +P+VVSW+  IA +       EA  +F+ +     + N  T+ + +S+    
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNL 375

Query: 290 RILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            +LR G++I  +C KV  ++  + +GN+L+  Y KC  V  AR  F  +   D VSWN+M
Sbjct: 376 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 435

Query: 349 IAGYSENGFFNQALDMFCHM----------------------------LEF-------SL 373
           +AGY+  G   +A+++   M                            LEF        +
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGM 495

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            PN  T++  L A    ++LK   ++H +++++   L   + S LI+ Y  C++L  +  
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V SE+  ++ V  N++ S    +     AL+L R +  S  EVN  T    L AC+ +  
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 615

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L QGK IH   ++   D   F+ +++IDMY +CG+I+ ++R F  + +  L  WN M+  
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 675

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   +  NLF +    G+KP+ IT+  +L++C H+GL+ E   Y   M   + + P
Sbjct: 676 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 735

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            +E YAC+VDLL R G        I++MP  P+A +W SLL AC I+ N DL   A   L
Sbjct: 736 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 795

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            EL+P +   YVL++N+Y++AG W D  K+R  MKE+ + K PG SWI V    H F  G
Sbjct: 796 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 855

Query: 734 DSSHSQSKEIYKELIKLY 751
           D+SH   ++I  ++  LY
Sbjct: 856 DTSHPLMEQISAKMESLY 873



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 3/281 (1%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           ASIL+      +L+   QVH+ ++ +G  + + + S L+  Y +   + +++R+  ++ +
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +N     A+  +      + E ++L+  +       +   F  V KAC+ + +   GK +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           +   L   ++ +  V+ +++DM+ KCG ++ A+R F +I    +  WN M+ GY   G +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            +     + M   GVKPD++T+ A+++    +G   EA  Y   M  L    P +  +  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 621 IVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACT 658
           ++    + G    A     +M    + P++    S +SACT
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACT 373



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 13/233 (5%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +L+ C  + +L  G  +H   +    D   F+ S ++++YC+ G +EDA+R F K+ 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             ++  W A+M  Y   G Y E   LF  M   GV+PD   +  V  +C      R  + 
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 601 YLSCMSDLHGLIPQLEHYAC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
               M     L    E  +C    I+D+  + G ++ A+   +++    D  +W  ++S 
Sbjct: 212 VYDYM-----LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-KDVFMWNIMVSG 265

Query: 657 CTIYGNIDLGL--LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            T  G     L  ++  KL  ++PD  +   ++S  YA +G + +  K   EM
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEM 317


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 237/732 (32%), Positives = 374/732 (51%), Gaps = 21/732 (2%)

Query: 32  RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R A +   +T  +DI  YN L+   +R      AL LF  L   GL  D  T S  +K C
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 92  GSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
           G L +  +   VH   LK GF   V + +  ++ Y K+ +       F +    + V++T
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKV 205
           +++ GY  NG  D+   +  +M+  G+  N F+   VLGA  D   ++ G Q+H   VK 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 206 GF--LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEA 260
           GF   + VCN    A++ +Y++     DA  +FD +   D V+W+  I   AA    +E 
Sbjct: 235 GFEFTTFVCN----ALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           F +F  +R    +++       L     +R L   KQ+     K G+     I  AL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 321 YGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           Y KC  V++A  +F       + V+W +MI G+ +N    +A+D+FC M    + PN +T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFT 410

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            +++L    +S       Q+H+ IIK+ +    S+ + L+  Y K   + ES RV   I 
Sbjct: 411 YSTVLAGKPSS----LLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA-MTDLEQGK 498
            K+ V  +A+ + L       +A+E++  +     + N  TFS V+ AC++    +E GK
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH  A+K+     + V SA++ MY K G IE A++ F +     +  WN+M+ GY QHG
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              +   +F  M   G+  D++T++ VLT+C HAGLV E   Y + M   + +  + EHY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY 646

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
           +C+VDL  R G+ + A   I+ MP P    IW++LL+AC ++ N++LG LA  KL+ LQP
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           ++   YVLLSN++A AG W +   +RK M E+ + KE G SWI +      F AGD SH 
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 739 QSKEIYKELIKL 750
            S  +Y +L +L
Sbjct: 767 FSDLVYAKLEEL 778



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/548 (24%), Positives = 267/548 (48%), Gaps = 26/548 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++   +K+G   D  + T+L+  + K  DF    R +FD    ++++++ +L+SG AR 
Sbjct: 125 QVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDG-RGIFDEMGIKNVVSWTSLLSGYARN 183

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRV 113
             +   + L ++++ +G+ P+ FTF++++   G+L +  I      VH + +K GF    
Sbjct: 184 GLNDEVIHLINQMQMEGVNPNGFTFATVL---GALADESIIEGGVQVHAMIVKNGFEFTT 240

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  I  Y KS  +  AE  F   +  D+V +  M+ GY   G + +  ++F  MR  
Sbjct: 241 FVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLA 300

Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G++L+       L      +E    +Q+H   VK G+       +  A+M  Y +C    
Sbjct: 301 GVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGY--EFAQDIRTALMVTYSKCSSVD 358

Query: 231 DAVKMFDEITEP-DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           +A K+F       +VV+W+  I       +  +A  LF  +     + N +T   +L+  
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGK 418

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               +     Q+ A   K  + +V S+  AL+  Y K G V ++  +F  +  KD V+W+
Sbjct: 419 PSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS-KSLKQAMQVHSHIIK 405
           +M+ G ++     +A+++F  +++  + PN YT +S++ A S+S  +++   Q+H+  +K
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           SG      + S L+T Y K   +  +++V +  ++++ V  N++ +         +ALE+
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEV 594

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYC 524
           ++ +      ++  TF  VL AC     +E+G+    + +K  + D+     S ++D+Y 
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYS 654

Query: 525 KCGTIEDA 532
           + G  + A
Sbjct: 655 RAGMFDKA 662



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 140/262 (53%), Gaps = 8/262 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IK  +   P ++T L+  + K  +   + R  +    +DI+ ++A+++GLA+  
Sbjct: 425 QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTR 484

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
            S  A+++F +L  +G++P+ +TFSS++ AC S    ++  + +H   +K G S+ + + 
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y+K G I SAE  F    + D V++ +M+ GY  +G+  K+ EVF  M++ GL 
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLP 604

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           L++ +   VL A      V+EGE+     +K   +     H  + +++LY R G    A+
Sbjct: 605 LDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY-SCMVDLYSRAGMFDKAM 663

Query: 234 KMFDEITEPDVVSWSERIAAAC 255
            + + +  P   +    + AAC
Sbjct: 664 DIINGMPFPASPTIWRTLLAAC 685


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 208/602 (34%), Positives = 325/602 (53%), Gaps = 10/602 (1%)

Query: 163 SKEVFVEMRSL--GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNN 217
           S+ + V M  L  GL  + F    VL       D+   +Q+H   +K         H+ N
Sbjct: 10  SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNA--HVMN 67

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQI 274
            ++++Y+ CG+  +A  +FD + +    SW+  IA   +     +A  LF+++     Q 
Sbjct: 68  NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQP 127

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N  T + +L +      L+ GK++ A     G    V +G AL+ MYGKCG +N+AR IF
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           D L+  D +SW  MI  Y+++G   +A  +   M +    PN  T  SIL A ++  +LK
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              +VH H + +G  LD  + + L+  Y K  ++++++ V   +  ++ V  N +     
Sbjct: 248 WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFA 307

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 EA +L+  +     + +   F  +L ACA+   LE  K IH  AL +  + D+ 
Sbjct: 308 EHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR 367

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++ MY K G+I+DA+  F ++   ++  WNAM+ G AQHG   +   +F +M+  G
Sbjct: 368 VGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHG 427

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           VKPD +T++AVL++C HAGLV E R+    M+ ++G+ P + H  C+VDLLGR G L  A
Sbjct: 428 VKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA 487

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
           K+ ID M + PD   W +LL +C  YGN++LG L   + L+L P N +TYVLLSN+YA A
Sbjct: 488 KLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEA 547

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G W+ V  +R  M+E+ + KEPG SWI V    H F   DSSH + KEI +   K+ E +
Sbjct: 548 GKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKI 607

Query: 755 VA 756
            A
Sbjct: 608 KA 609



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 217/443 (48%), Gaps = 14/443 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++  +IK+    +  +   L+  + +    + A R +FD    +   ++NA+I+G    
Sbjct: 49  QVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA-RCVFDALVKKSGASWNAMIAGYVEH 107

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
             +  A++LF  + ++G++P+A T+  ++KAC SL   +  + VH      G  S V + 
Sbjct: 108 KHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVG 167

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y K G I  A   F + ++ D +++T M+  Y  +G   ++  + ++M   G +
Sbjct: 168 TALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFK 227

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +  ++L A      +K  +++H   +  G    V   +  A++ +Y + G   DA 
Sbjct: 228 PNAITYVSILNACASEGALKWVKRVHRHALDAGLELDV--RVGTALVQMYAKSGSIDDAR 285

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD +   DVVSW+  I A  +   G EA+ LF  ++    + +    +++L++     
Sbjct: 286 VVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAG 345

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L   K+I       G    V +G AL+ MY K G ++DAR +FD +  ++ VSWN+MI+
Sbjct: 346 ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMIS 405

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
           G +++G    AL++F  M    + P+  T  ++L A S++  + +    +  + +  G  
Sbjct: 406 GLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIE 465

Query: 410 LDDSMISCLITTYGKCNALNESK 432
            D S  +C++   G+   L E+K
Sbjct: 466 PDVSHCNCMVDLLGRAGRLMEAK 488



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/460 (21%), Positives = 210/460 (45%), Gaps = 24/460 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ +   G   D  + T L+  + K      A R   +  N DII++  +I   A+  
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A +L  ++  +G +P+A T+ S++ AC   G+L+  + VH   L  G    V + +
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG I  A + F      D V++  M+  +  +G   ++ ++F++M++ G + 
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +     ++L A       E   +IH   +  G    V   +  A++++Y + G   DA  
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV--RVGTALVHMYSKSGSIDDARV 387

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   +VVSW+  I+       G +A  +F+ +  +  + +  T + +LS+     +
Sbjct: 388 VFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGL 447

Query: 292 LRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
           +  G+ Q  A     G    VS  N ++ + G+ G++ +A+   D + +  D  +W +++
Sbjct: 448 VDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALL 507

Query: 350 AGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
                 G       +    L+        + L+ N Y  A   + VS  +++ +   +  
Sbjct: 508 GSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRK 567

Query: 402 HIIKSGFLLDDSMISCLI--TTYGKCNALNESK-RVLSEI 438
              +S   +D+ +   L+  +++ +C  +NESK +V+ +I
Sbjct: 568 EPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKI 607


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 215/666 (32%), Positives = 354/666 (53%), Gaps = 12/666 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C S++E      + +K G  S     +  +  + K G +  A   F+   D  +  
Sbjct: 83  LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDEL 142

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           Y  M+ GY  N   D +   F  MR  G+    ++ T +L   G + D+++G++IH   +
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEA 260
             GF S V       ++N+Y +C    +A KMFD + E D+V W+  I+       G  A
Sbjct: 203 VNGFASNV--FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTA 260

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             L   ++    + +  T++++L +V     LR G+ I  +  + GF   V++  AL+ M
Sbjct: 261 LELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDM 320

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG V  AR IFD +  K  VSWNSMI GY +NG    A+++F  M++  +     T+
Sbjct: 321 YSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTV 380

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
              L A ++   ++Q   VH  + +     D S+++ LI+ Y KC  ++ +  +   +  
Sbjct: 381 MGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH 440

Query: 441 KNAVHINALASVLVYASCHA--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           K  V  NA+  +L YA      EA++ +  +     + +  T   V+ A A ++ L Q K
Sbjct: 441 KTLVSWNAM--ILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH L ++   D+++FV +A++DMY KCG +  A++ F  +    +  WNAM+ GY  HG
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
                  LF KM K  +KP+E+T+L VL++C H+GLV E   Y   M   +GL P ++HY
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHY 618

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
             +VDLLGR   L  A   I +MPI P   ++ ++L AC I+ N++LG  A +++ +L P
Sbjct: 619 GAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDP 678

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           D+   +VLL+N+YA+A MW+ V ++R  M++K + K PG+S + +    H FY+G +SH 
Sbjct: 679 DDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHP 738

Query: 739 QSKEIY 744
           Q+K+IY
Sbjct: 739 QAKKIY 744



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 258/506 (50%), Gaps = 11/506 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q   L+IKNG + + +  T L+S F KF     A R     +++    Y+ ++ G AR  
Sbjct: 95  QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNS 154

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               A+  F R+RY G+RP  + F+ L+K CG    L++ + +H   +  GF+S V+ ++
Sbjct: 155 SLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMT 214

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  YAK   +  A   F    + D V +  ++ GY  NG    + E+ + M+  G   
Sbjct: 215 GVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRP 274

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A  DV   + G  IHG+ ++ GF S V  +++ A++++Y +CG    A  
Sbjct: 275 DSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFV--NVSTALVDMYSKCGSVGTARL 332

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +T   VVSW+  I       D   A  +F+ +     ++   T++  L +      
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD 392

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+ +     ++     VS+ N+LISMY KC +V+ A  IF+ L  K  VSWN+MI G
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++NG  N+A+D FC M   ++ P+ +TM S++ A++    L QA  +H  +I++    +
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC A++ ++++   +D+++    NA+            ALEL+  +  
Sbjct: 513 VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQG 497
              + N  TF  VL AC+    +E+G
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEG 598


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 230/723 (31%), Positives = 365/723 (50%), Gaps = 121/723 (16%)

Query: 80  DAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D+  FS L+  C    S ++   VH   +K  F+S  ++ +  I+ Y K G         
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCG--------- 68

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE 196
             C+D+                    ++++F  M    LE N FS  +++ A        
Sbjct: 69  --CVDV--------------------ARKLFDRM----LERNIFSWNSIICAF------- 95

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
                  K GFL                      DAV +F+++ + D  SW+  I+    
Sbjct: 96  ------TKSGFLD---------------------DAVHIFEKMPQVDQCSWNSMIS---- 124

Query: 257 GVEAFGLFKD-------LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
           G E  G F +       +  + F +NEY+  + LS+  G + L+ G QI +  Y+  ++ 
Sbjct: 125 GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS 184

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V +G+AL+ MY KCG+V  A+S+FD +  +  VSWNS+I  Y +NG  ++AL +F  M+
Sbjct: 185 DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNAL 428
           +  + P+  T+AS++ A +   ++K+  Q+H+ ++K     +D ++ + L+  Y KCN +
Sbjct: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304

Query: 429 NESK---------RVLSEIDK----------------------KNAVHINALASVLVYAS 457
           NE++          V+SE                         K+ +  NAL +      
Sbjct: 305 NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNG 364

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY------DQ 511
            + EAL L+R +          TF  +L ACA + DL+ G+  H   LK  +      D 
Sbjct: 365 ENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDS 424

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+FV +++IDMY KCG++E+  R F+ +       WNAM++GYAQ+G  ++   +F KM 
Sbjct: 425 DVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKML 484

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
           + G  PD +T + VL +C HAGL+ E R Y   M+  HGL+P  +HY C+VDLLGR G L
Sbjct: 485 ESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYL 544

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           E AK  I++M + PDA +W SLL+AC ++ NI LG     KLLE+ P+N   YVLLSN+Y
Sbjct: 545 EEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMY 604

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A    W +V ++RK M+++ + K+PG SWI + G  + F   D  H++ KEIY  L  + 
Sbjct: 605 AENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTIL 664

Query: 752 EHM 754
           + M
Sbjct: 665 QQM 667



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 225/468 (48%), Gaps = 50/468 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++I  FTK      A          D  ++N++ISG  +  +   AL  F ++   G  
Sbjct: 89  NSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFL 148

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + ++F S + AC  LQ+ ++   +H +  +  + S VY+ S  ++ Y+K G +  A+  
Sbjct: 149 VNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSV 208

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
           F +      V++ +++  Y  NG  D++ ++FVEM   G+E +E +L +V+ A      +
Sbjct: 209 FDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAI 268

Query: 193 KEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQ----------------------- 228
           KEG+QIH   VK   F + +   L NA++++Y +C +                       
Sbjct: 269 KEGQQIHARVVKCDEFRNDLI--LGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMV 326

Query: 229 ----KLDAVK----MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEY 277
               K   VK    MF  +   DV++W+  IA      +  EA  LF+ L+        Y
Sbjct: 327 SGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHY 386

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFM------EVVSIGNALISMYGKCGQVNDAR 331
           T  NLL++      L+ G+Q  +   K GF         V +GN+LI MY KCG V +  
Sbjct: 387 TFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGC 446

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F +++ KD VSWN+MI GY++NGF N+AL++FC MLE    P+  TM  +L A S++ 
Sbjct: 447 RVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAG 506

Query: 392 SLKQAM-QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            L +      S   + G +      +C++   G+   L E+K ++ E+
Sbjct: 507 LLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 36/369 (9%)

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
           GL K L+ +   ++      LL+     R  R   ++ A   K  F     I N LI +Y
Sbjct: 5   GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64

Query: 322 GKCGQVNDARSIFDYLIFK-------------------------------DSVSWNSMIA 350
           GKCG V+ AR +FD ++ +                               D  SWNSMI+
Sbjct: 65  GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMIS 124

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+ ++G F++AL  F  M     + N Y+  S L A +  + LK   Q+HS + +S +L 
Sbjct: 125 GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLS 184

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  M S L+  Y KC  +  ++ V  E+  ++ V  N+L +         EAL+++  + 
Sbjct: 185 DVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMI 244

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTI 529
               E +  T + V+ ACA ++ +++G+ IH   +K   +  D+ + +A++DMY KC  I
Sbjct: 245 KCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRI 304

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            +A+  F  +   S+    +M+ GYA+         +F+ M    +  D IT+ A++  C
Sbjct: 305 NEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGC 360

Query: 590 CHAGLVREA 598
              G   EA
Sbjct: 361 TQNGENEEA 369



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 20/257 (7%)

Query: 15  PILS----TTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARFCQSGPALKLF 69
           PI S    T+++S + K +  + A R++F +   +D+IT+NALI+G  +  ++  AL LF
Sbjct: 315 PIRSVVSETSMVSGYAKASKVKVA-RYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 373

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSLQENEI---------VHGVCLKLGFSSRVYLVSGFI 120
             L+ + + P  +TF +L+ AC +L + ++          HG   + G  S V++ +  I
Sbjct: 374 RLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLI 433

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + Y K G + +    F+  L+ D V++ AM+ GY  NG  +K+ EVF +M   G   +  
Sbjct: 434 DMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHV 493

Query: 181 SLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++  VL A      + EG            L  + +H    +++L  R G   +A  + +
Sbjct: 494 TMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHY-TCMVDLLGRAGYLEEAKNLIE 552

Query: 238 EIT-EPDVVSWSERIAA 253
           E++ +PD + W   +AA
Sbjct: 553 EMSMQPDAIVWGSLLAA 569



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 73/370 (19%), Positives = 153/370 (41%), Gaps = 57/370 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRR-----AFRFLFDTQNRDIITYNALISG 55
           +I+  +IK G   D +   +++S     +  +      A     D    D+I  NAL+  
Sbjct: 238 KIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDM 297

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
            A+                                C  + E  I+  +       S   +
Sbjct: 298 YAK--------------------------------CNRINEARIIFDMMPIRSVVSETSM 325

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           VSG    YAK+ ++  A   F + +  D + + A++ G   NGE +++  +F  ++   +
Sbjct: 326 VSG----YAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESV 381

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQI------HGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
               ++   +L A     D++ G Q       HGF  + G  S V   + N+++++Y++C
Sbjct: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDV--FVGNSLIDMYMKC 439

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
           G   +  ++F  + E D VSW+  I        G +A  +F  +  +    +  TMI +L
Sbjct: 440 GSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVL 499

Query: 284 SSVGGERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-D 341
            +     +L  G+   ++   + G M +      ++ + G+ G + +A+++ + +  + D
Sbjct: 500 CACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPD 559

Query: 342 SVSWNSMIAG 351
           ++ W S++A 
Sbjct: 560 AIVWGSLLAA 569


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 218/667 (32%), Positives = 357/667 (53%), Gaps = 20/667 (2%)

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAK--SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
           I H   +KLG S+ +Y  +  +  Y +  SG +  A   F +    D V +  M+ GYV 
Sbjct: 20  ITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVN 79

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL-----GASFDVKEGEQIHGFGVKVGFLSGV 211
           +G    + E++  M+S GL  + ++  ++L         DV  G+Q+H   VK+G+   V
Sbjct: 80  SGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDV--GQQVHSLIVKMGYEEHV 137

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLR 268
             +  +A++++Y +C +  DA  +F  I   + VSW+  IA      D   AF L + + 
Sbjct: 138 --YAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCME 195

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
               ++++ T   LL+ +  ++  +   Q+     K G     ++ NA I+ Y +CG + 
Sbjct: 196 EEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLE 255

Query: 329 DARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
           DA  +FD  +  +D V+WNSM+A +  +     A  +F  M +F   P+ YT  +I+ A 
Sbjct: 256 DAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISAC 315

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY--GKCNALNESKRVLSEIDKKNAVH 445
           S+  + K    +H  +IK G      + + +I  Y     N++ ++  V   ++ K+ V 
Sbjct: 316 SHKDNGKS---LHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVS 372

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            N++ +          AL+L+  +  +  +++   FS VL++C+ +  L+ G+ IH L +
Sbjct: 373 WNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTV 432

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+ ++ + FV S++I MY KCG IEDA+++F K  +DS   WN++M  YAQHG       
Sbjct: 433 KSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALG 492

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF +M    VK D IT++A LT+C H GLV + R  L  M+  +G+ P++EHYAC VDL 
Sbjct: 493 LFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLF 552

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
           GR G L+ AK  I+ MP  PDA +W++LL AC   G+I+L     S LLEL+P+   TYV
Sbjct: 553 GRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYV 612

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           +LSN+Y     W++   + + M+E+ + K PG+SWI V    H F A D  HS  +EIY+
Sbjct: 613 ILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQ 672

Query: 746 ELIKLYE 752
            L +L E
Sbjct: 673 ILEQLME 679



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 159/550 (28%), Positives = 286/550 (52%), Gaps = 36/550 (6%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRF-LFDT-QNRDIITYNALISGLARFCQSGP 64
           IK G   D   +  ++S +T+ +     F   LFD   +RD +T+N +ISG       G 
Sbjct: 26  IKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGS 85

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVK--ACG-SLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A +L+  ++  GL PDA+TF S++K  AC   L   + VH + +K+G+   VY  S  ++
Sbjct: 86  AWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLD 145

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YAK   +  A M F+     ++V++ A++ G+V  G+ D +  +   M   G+ L++ +
Sbjct: 146 MYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGT 205

Query: 182 LTAVLGASFDVKE----GEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            + +L    D K+      Q+H   +K G  F + VC    NA +  Y +CG   DA ++
Sbjct: 206 FSPLL-TLLDEKKFYKLTMQLHCKIIKHGVQFDNTVC----NATITSYSQCGSLEDAERV 260

Query: 236 FD-EITEPDVVSWSERIAA--ACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           FD  +   D+V+W+  +AA  A D  E AF LF D++   F+ + YT   ++S+   +  
Sbjct: 261 FDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHK-- 318

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMY--GKCGQVNDARSIFDYLIFKDSVSWNSMI 349
              GK +     K G  ++V I NA+I+MY       + DA ++F  +  KD VSWNS++
Sbjct: 319 -DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSIL 377

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            G+S+ G    AL +F HM  F+++  + Y  +++L + S+  +L+   Q+H   +KSGF
Sbjct: 378 TGFSQTGHSENALKLFVHM-RFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGF 436

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALEL 465
             +D + S LI  Y KC  + ++++   +  K +++  N++  +  YA  H +   AL L
Sbjct: 437 ESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSI--MFAYAQ-HGQGDVALGL 493

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMY 523
           +  +     +++  TF   L AC+ +  +EQG+ +   ++ + Y     +E  +  +D++
Sbjct: 494 FFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYL-LKSMASDYGISPRMEHYACAVDLF 552

Query: 524 CKCGTIEDAK 533
            + G +++AK
Sbjct: 553 GRAGYLDEAK 562



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 211/456 (46%), Gaps = 28/456 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL++K G+       + L+  + K    R AF        R+ +++NALI+G     
Sbjct: 123 QVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEG 182

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A  L   +  +G+R D  TFS L+      +  ++   +H   +K G      + +
Sbjct: 183 DHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCN 242

Query: 118 GFIENYAKSGEIVSAEMCFRDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I +Y++ G +  AE  F   +   D V + +M+  ++ +   + + ++F++M+  G E
Sbjct: 243 ATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFE 302

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCGQKL--DA 232
            + ++ T ++ A      G+ +HG  +K G   L  +C    NA++ +Y+        DA
Sbjct: 303 PDIYTYTTIISACSHKDNGKSLHGLVIKRGLEQLVPIC----NAVIAMYLESSSNSMEDA 358

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           + +F  +   D VSW+  +   +       A  LF  +RF    I+ Y    +L S    
Sbjct: 359 LNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDL 418

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L+ G+QI     K GF     + ++LI MY KCG + DAR  F+      S++WNS++
Sbjct: 419 ATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIM 478

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
             Y+++G  + AL +F  M +  +  +  T  + L A S+   ++Q      +++KS  +
Sbjct: 479 FAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQG----RYLLKS--M 532

Query: 410 LDDSMIS-------CLITTYGKCNALNESKRVLSEI 438
             D  IS       C +  +G+   L+E+K ++  +
Sbjct: 533 ASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESM 568



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 188/383 (49%), Gaps = 15/383 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD--TQNRDIITYNALISGLAR 58
           Q++  +IK+G   D  +    I+ +++      A R +FD    +RD++T+N++++    
Sbjct: 224 QLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAER-VFDGAVGSRDLVTWNSMLAAFLA 282

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
             +   A KLF  ++  G  PD +T+++++ AC      + +HG+ +K G    V + + 
Sbjct: 283 HDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIKRGLEQLVPICNA 342

Query: 119 FIENY--AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            I  Y  + S  +  A   F      D V++ +++ G+   G  + + ++FV MR   ++
Sbjct: 343 VIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVD 402

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++ ++ +AVL +  D+     G+QIH   VK GF S   + + ++++ +Y +CG   DA 
Sbjct: 403 IDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESN--DFVASSLIFMYSKCGMIEDAR 460

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K F++  +   ++W+  + A      G  A GLF  +R    +++  T +  L++     
Sbjct: 461 KSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIG 520

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSM 348
           ++  G+  +++     G    +      + ++G+ G +++A+++ + + F  D++ W ++
Sbjct: 521 LVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTL 580

Query: 349 IAGYSENGFFNQALDMFCHMLEF 371
           +      G    A  +  H+LE 
Sbjct: 581 LGACRACGDIELAAQVASHLLEL 603


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 219/729 (30%), Positives = 395/729 (54%), Gaps = 24/729 (3%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G+    ++ + LI  F+K   F  A++   D+ + ++  +N +I+G  R    G   
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENY 123
            LF  +     +PD++T+SS++ AC SL++    ++V    +K G +  V++ +  ++ Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLY 295

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           AK G +  A   F    +   V++T M+ GY  + +   + E+F EMR  G+E+N  ++T
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355

Query: 184 AVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF---D 237
           +V+   G    V E  Q+H +  K GF   + + +  A++++Y + G    + ++F   D
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFY--LDSSVAAALISMYSKSGDIDLSEQVFEDLD 413

Query: 238 EITEPDVV-----SWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           +I   ++V     S+S+         +A  LF  +     + +E+++ +LLS +     L
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPG----KAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CL 466

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GKQ+  +  K G +  +++G++L ++Y KCG + ++  +F  + FKD+  W SMI+G+
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +E G+  +A+ +F  ML+    P+  T+A++L   S+  SL +  ++H + +++G     
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM 586

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S L+  Y KC +L  +++V   + + + V  ++L S         +   L+R +  S
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
              ++    S +LKA A   +   G  +H    K     +  V S+++ MY K G+I+D 
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            +AF +I    L  W A++  YAQHG  +E   ++N M + G KPD++T++ VL++C H 
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GLV E+  +L+ M   +G+ P+  HY C+VD LGR G L  A+  I+ M I PDA +W +
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL+AC I+G ++LG +A  K +EL+P +   Y+ LSN+ A  G W++V + RK MK   +
Sbjct: 827 LLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886

Query: 713 CKEPGYSWI 721
            KEPG+S +
Sbjct: 887 QKEPGWSSV 895



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 183/712 (25%), Positives = 345/712 (48%), Gaps = 60/712 (8%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDR 71
            D  L+ +L+S ++       A + LFDT    D+++ N +ISG  +      +L+ F +
Sbjct: 82  FDVFLTKSLLSWYSNSGSMADAAK-LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSK 140

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVC---LKLGFSSRVYLVSGFIENYAKSGE 128
           + + G   +  ++ S++ AC +LQ       VC   +K+G+     + S  I+ ++K+  
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
              A   FRD L  +   +  ++ G + N  +    ++F EM     + + ++ ++VL A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260

Query: 189 SFDVKE---GEQIHGFGVKVGFLSG-VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
              +++   G+ +    +K G     VC     AI++LY +CG   +A+++F  I  P V
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAEDVFVC----TAIVDLYAKCGHMAEAMEVFSRIPNPSV 316

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  ++    + D   A  +FK++R +  +IN  T+ +++S+ G   ++    Q+ A+
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMIAGYSENGFFN 359
            +K GF    S+  ALISMY K G ++ +  +F+ L  I + ++  N MI  +S++    
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPG 435

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A+ +F  ML+  L  + +++ S+L  +     L    QVH + +KSG +LD ++ S L 
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLF 492

Query: 420 TTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           T Y KC +L ES ++   I  K NA   + ++    Y     EA+ L+  +       + 
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR-EAIGLFSEMLDDGTSPDE 551

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           ST + VL  C++   L +GK IH   L+A  D+ + + SA+++MY KCG+++ A++ + +
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR 611

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +        ++++ GY+QHG   +   LF  M   G   D     ++L +          
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA---------- 661

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
               + +SD   L  Q+  Y      + ++GL               +  +  SLL+  +
Sbjct: 662 ----AALSDESSLGAQVHAY------ITKIGLCT-------------EPSVGSSLLTMYS 698

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +G+ID    A S++    PD  +   L+++ YA  G  N+  ++   MKEK
Sbjct: 699 KFGSIDDCCKAFSQI--NGPDLIAWTALIAS-YAQHGKANEALQVYNLMKEK 747



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 242/475 (50%), Gaps = 24/475 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++ + K+G +LD  ++  LIS ++K  D     + F  L D Q ++I+  N +I+  +
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +  + G A++LF R+  +GLR D F+  SL+     L   + VHG  LK G    + + S
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGS 489

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                Y+K G +  +   F+     DN  + +M+ G+   G   ++  +F EM   G   
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E +L AVL    +   +  G++IHG+ ++ G   G+   L +A++N+Y +CG    A +
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM--DLGSALVNMYSKCGSLKLARQ 607

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           ++D + E D VS S  I+  +  G+  + F LF+D+  + F ++ + + ++L +      
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G Q+ A+  K+G     S+G++L++MY K G ++D    F  +   D ++W ++IA 
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-MQVHSHIIKSGFLL 410
           Y+++G  N+AL ++  M E    P+  T   +L A S+   ++++   ++S +   G   
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEP 787

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI--NALASVLVYASC--HAE 461
           ++    C++   G+   L E++  +      N +HI  +AL    + A+C  H E
Sbjct: 788 ENRHYVCMVDALGRSGRLREAESFI------NNMHIKPDALVWGTLLAACKIHGE 836



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 2/308 (0%)

Query: 292 LRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           LR  K +QA   +   +   V +  +L+S Y   G + DA  +FD +   D VS N MI+
Sbjct: 64  LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY ++  F ++L  F  M       N  +  S++ A S  ++   +  V  H IK G+  
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
            + + S LI  + K     ++ +V  +    N    N + +  +    +    +L+  + 
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
              ++ +  T+S VL ACA++  L  GK +    +K    +D+FV +A++D+Y KCG + 
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMA 302

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A   F +I   S+  W  M+ GY +         +F +M   GV+ +  T  +V+++C 
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362

Query: 591 HAGLVREA 598
              +V EA
Sbjct: 363 RPSMVCEA 370


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 232/721 (32%), Positives = 384/721 (53%), Gaps = 19/721 (2%)

Query: 40  DTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--- 96
           + ++R    +NALI       +   AL ++  +R +G+  D ++F  L+KACG L++   
Sbjct: 121 EMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRS 180

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYV 155
              +H + +KLGF+S  ++V+  +  YAK+  + +A+  F    +  D V + +++  Y 
Sbjct: 181 GTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYS 240

Query: 156 WNGEFDKSKEVFVEMRSLGLELNEFS----LTAVLGASFDVKEGEQIHGFGVKV--GFLS 209
            +G+  ++ ++F EM+  G   N ++    LTA  G S+  K G++IH   +K    F  
Sbjct: 241 TSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSY-AKLGKEIHAAVLKSTHSFEV 299

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKD 266
            VCN    A++ +Y RCG+ L+A ++   +   DVV+W+  I      +   EA   F D
Sbjct: 300 YVCN----ALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCD 355

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +     + +E ++ +++++ G    L AG ++ A+  K G+   + +GN LI MY KC  
Sbjct: 356 MIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNL 415

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
                  F  +  KD +SW ++IAGY+ N    +AL +F  + +  +  +   + SIL A
Sbjct: 416 TCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRA 475

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            S  KS+    ++H HI++ G L+D  + + L+  YGKC  +  + RV   I  K+ V  
Sbjct: 476 CSVLKSMLIVKEIHCHILRKG-LIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSW 534

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
            ++ S         EA+EL+R +  +    +      +L A A+++ L++G+ IH   L+
Sbjct: 535 TSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLR 594

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             +  +  +  AV+DMY  CG ++ AK  F +I R  L  + +M+  Y  HGC      L
Sbjct: 595 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVEL 654

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           FNKM    V PD I++LA+L +C HAGL+ E R +L  M   + L P  EHY C+VD+LG
Sbjct: 655 FNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLG 714

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R   +  A   +  M   P   +W +LL+AC  +   ++G +A  +LLEL+P N    VL
Sbjct: 715 RANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 774

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           +SN++A  G WNDV K+R +MK   + K PG SWI + G  H F A D SH ++KEIY++
Sbjct: 775 VSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEK 834

Query: 747 L 747
           L
Sbjct: 835 L 835



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 259/525 (49%), Gaps = 23/525 (4%)

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL--- 186
           +S E  F +  D    A+ A++  YV NGE   +  ++  MR  G+ L+ +S   +L   
Sbjct: 113 LSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKAC 172

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVV 245
           G   D++ G ++H   VK+GF S     + NA++++Y +      A ++FD   E  D V
Sbjct: 173 GKLRDIRSGTELHCMLVKLGFNS--TGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAV 230

Query: 246 SWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
            W+  +++   +   +E   LF++++      N YT+++ L++  G    + GK+I A  
Sbjct: 231 LWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAV 290

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K      V + NALI+MY +CG++ +A  I   +   D V+WNS+I GY +N  + +AL
Sbjct: 291 LKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEAL 350

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
             FC M+     P+  ++ S++ A     +L   M++H+++IK G+  +  + + LI  Y
Sbjct: 351 QFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMY 410

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KCN      R    + +K+ +    + +      CH EAL+L+R +     E++     
Sbjct: 411 SKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLG 470

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            +L+AC+ +  +   K IHC  L+     D  +++ ++D+Y KC  +  A R F  I   
Sbjct: 471 SILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGK 529

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +  W +M+   A +G  +E   LF +M++ G+  D +  L +L++      +++ R   
Sbjct: 530 DVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGR--- 586

Query: 603 SCMSDLHGLIPQ----LEH--YACIVDLLGRVGLLEGAKMTIDQM 641
               ++HG + +    LE      +VD+    G L+ AK   D++
Sbjct: 587 ----EIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 627



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 214/442 (48%), Gaps = 15/442 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ ++K+ H  +  +   LI+ + +      A R L    N D++T+N+LI G  +  
Sbjct: 285 EIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNL 344

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL+ F  +   G +PD  + +S++ A G L        +H   +K G+ S + + +
Sbjct: 345 MYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGN 404

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K          F    + D +++T ++ GY  N    ++ ++F ++    +E+
Sbjct: 405 TLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEI 464

Query: 178 NEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +E  L ++L A   +K     ++IH   ++ G +  V   + N ++++Y +C     A +
Sbjct: 465 DEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTV---IQNELVDVYGKCRNMGYASR 521

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ I   DVVSW+  I+++    +  EA  LF+ +       +   ++ +LS+      
Sbjct: 522 VFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSA 581

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ G++I  +  + GF    SI  A++ MY  CG +  A+++FD +  K  + + SMI  
Sbjct: 582 LKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 641

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    ++++F  M   ++ P+  +  ++L A S++  L +  +    I++  + L+
Sbjct: 642 YGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLK-IMELEYKLE 700

Query: 412 --DSMISCLITTYGKCNALNES 431
                  CL+   G+ N + E+
Sbjct: 701 PWPEHYVCLVDMLGRANCVVEA 722


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 221/689 (32%), Positives = 365/689 (52%), Gaps = 31/689 (4%)

Query: 77  LRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           L P   +F  L+  C     LQ+ + +H   L+ G  S VYL +  +  YAK G IV A+
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKS--KEVFVEMRSLGLELNEFSLTAVLGASFD 191
           + F    + D V++  ++ GY   G    S   E+F  MR+     N  + + V  A+  
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
             E   G Q H   +K      V   + ++++N+Y + G  LDA K+FD I E + VSW+
Sbjct: 126 SPETFGGLQAHALAIKTSNFYDV--FVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWA 183

Query: 249 ERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I   A      EA+ LF  +R  +   +++   ++LS++    ++  GKQI     K 
Sbjct: 184 TIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN 243

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G + + S+GNAL++MYGKCG ++DA   F+    KD ++W++MI GY++ G  ++AL++F
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
            +M      P+ +T   ++ A S+  +L++  Q+H + +K+G+               KC
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKC 363

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
            +L ++++    + + +         ++++ SC    +++ R +       +  T + VL
Sbjct: 364 GSLVDARKGFDYLKEPD---------IVLWTSCR---MQMERIM------PHELTMASVL 405

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           +AC+++  LEQGK IH   +K  +  ++ + SA+  MY KCG++ED    FR++    + 
Sbjct: 406 RACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIM 465

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM+ G +Q+G   +   LF ++     KPD +T++ VL++C H GLV   + Y   M
Sbjct: 466 TWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMM 525

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
            D  G+IP++EHYAC+VD+L R G L   K  I+   I     +W+ LL AC  Y N +L
Sbjct: 526 LDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYEL 585

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G  AG KL+EL     S Y+LLS++Y + G  +DV ++R+ MK + + KEPG SWI +  
Sbjct: 586 GAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKS 645

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             H F  GD  H Q  +I  EL +L +HM
Sbjct: 646 QVHVFVVGDQIHPQIVKICSELRRLRDHM 674



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 273/605 (45%), Gaps = 54/605 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ L++ G      L+ +L++ + K     +A        N+D++++N LI+G ++   
Sbjct: 32  IHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGT 91

Query: 62  SGPA--LKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLV 116
            G +  ++LF R+R +   P+  TFS +  A  S  E       H + +K      V++ 
Sbjct: 92  VGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVG 151

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I  Y K G ++ A   F    + + V++  ++ GY       ++ E+F+ MR     
Sbjct: 152 SSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGA 211

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F  T+VL A      V  G+QIH   +K G LS     + NA++ +Y +CG   DA 
Sbjct: 212 HDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS--IASVGNALVTMYGKCGCLDDAF 269

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K F+   + D ++WS  I   A A D  EA  LF ++  N  + +E+T + ++++     
Sbjct: 270 KTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIG 329

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQI  +  K G+   +        +  KCG + DAR  FDYL   D V W S   
Sbjct: 330 ALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTS--- 386

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
                          C M    ++P+  TMAS+L A S+  +L+Q  Q+H+  IK GF L
Sbjct: 387 ---------------CRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSL 431

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S L T Y KC +L +   V   +  ++ +  NA+ S L       +ALEL+  + 
Sbjct: 432 EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELR 491

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK----------------------AR 508
               + +  TF  VL AC+ M  +E+GK    + L                         
Sbjct: 492 HGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKL 551

Query: 509 YDQDIFVESAVIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           ++   F+ESA ID   C    +  A R +R     + AG   M +G  +   Y  +S+++
Sbjct: 552 HETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIY 611

Query: 568 NKMSK 572
             + +
Sbjct: 612 TALGR 616



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 229/482 (47%), Gaps = 45/482 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q ++L IK  +  D  + ++LI+ + K      A R +FDT   R+ +++  +ISG A  
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDA-RKVFDTIPERNTVSWATIISGYAME 192

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
             +  A +LF  +R +    D F ++S++ A      +   + +H + LK G  S   + 
Sbjct: 193 RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 252

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y K G +  A   F    D D++ ++AM+ GY   G+  ++  +F  M   G +
Sbjct: 253 NALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +EF+   V+ A  D+   +EG+QIHG+ +K G+   +  +       L  +CG  +DA 
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI--YFRKGFDYLKAKCGSLVDAR 370

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           K FD + EPD+V W+     +C           ++      +E TM ++L +      L 
Sbjct: 371 KGFDYLKEPDIVLWT-----SC----------RMQMERIMPHELTMASVLRACSSLAALE 415

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            GKQI A   K GF   V IG+AL +MY KCG + D   +F  +  +D ++WN+MI+G S
Sbjct: 416 QGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLS 475

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDD 412
           +NG   +AL++F  +   +  P+  T  ++L A S+   +++       ++   G +   
Sbjct: 476 QNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRV 535

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
              +C++    +   L+E+K  +              ++ + +  C      L+R + G+
Sbjct: 536 EHYACMVDILSRAGKLHETKEFIE-------------SATIDHGMC------LWRILLGA 576

Query: 473 CR 474
           CR
Sbjct: 577 CR 578



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 4/288 (1%)

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
           + L P   +   +L   +  K L++   +H+ ++++G      + + L+  Y KC ++ +
Sbjct: 4   YLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVK 63

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           +K V   I  K+ V  N L +         ++  +EL++ +       NG TFS V  A 
Sbjct: 64  AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAA 123

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           ++  +   G   H LA+K     D+FV S++I+MYCK G + DA++ F  I   +   W 
Sbjct: 124 SSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWA 183

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            ++ GYA      E   LF  M +     D+  Y +VL++     LV   +  + C++  
Sbjct: 184 TIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQ-IHCLALK 242

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           +GL+        +V + G+ G L+ A  T  ++    D   W ++++ 
Sbjct: 243 NGLLSIASVGNALVTMYGKCGCLDDAFKTF-ELSGDKDDITWSAMITG 289


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 229/712 (32%), Positives = 369/712 (51%), Gaps = 32/712 (4%)

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
           F Q   + K+  RLR         T+ SL+ AC S   L +   +H   L         L
Sbjct: 56  FAQKNSSFKI--RLR---------TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 104

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y K G +  A   F    + + V+YT+++ GY  NG+  ++  ++++M    L
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKL 230
             ++F+  +++ A   S DV  G+Q+H   +K+   S    HL   NA++ +YVR  Q  
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSS----HLIAQNALIAMYVRFNQMS 220

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKD-LRFNDFQINEYTMINLLSSV 286
           DA ++F  I   D++SWS  IA         EA    K+ L F  F  NEY   + L + 
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280

Query: 287 GGERILRA--GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
               +LR   G QI   C K         G +L  MY +CG +N AR +FD +   D+ S
Sbjct: 281 SS--LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN +IAG + NG+ ++A+ +F  M     IP+  ++ S+L A +   +L Q MQ+HS+II
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEAL 463
           K GFL D ++ + L+T Y  C+ L     +  +  +  ++V  N + +  +      E L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L++ +  S  E +  T   +L+ C  ++ L+ G  +HC +LK     + F+++ +IDMY
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG++  A+R F  +    +  W+ +++GYAQ G   E   LF +M   G++P+ +T++
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            VLT+C H GLV E     + M   HG+ P  EH +C+VDLL R G L  A+  ID+M +
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
            PD  +W++LLSAC   GN+ L   A   +L++ P N + +VLL +++AS+G W +   L
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           R  MK+  + K PG SWI +    H F+A D  H +  +IY  L  ++  M+
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQML 750



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/582 (26%), Positives = 282/582 (48%), Gaps = 31/582 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+  ++ +    D IL+  ++S + K    R A R +FD    R++++Y ++I+G ++ 
Sbjct: 88  KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDA-REVFDFMPERNLVSYTSVITGYSQN 146

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            Q   A++L+ ++  + L PD F F S++KAC S  +    + +H   +KL  SS +   
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG-EFDKSKEVFVEMRSLGL 175
           +  I  Y +  ++  A   F      D +++++++ G+   G EF+    +  EM S G+
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL-KEMLSFGV 265

Query: 176 -ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIM-----NLYVRC 226
              NE+   + L A   +     G QIHG  +K   L+G      NAI      ++Y RC
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-SELAG------NAIAGCSLCDMYARC 318

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
           G    A ++FD+I  PD  SW+  IA   +     EA  +F  +R + F  +  ++ +LL
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDS 342
            +      L  G QI ++  K GF+  +++ N+L++MY  C  +    ++F D+    DS
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN+++    ++    + L +F  ML     P+  TM ++L       SLK   QVH +
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            +K+G   +  + + LI  Y KC +L +++R+   +D ++ V  + L      +    EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           L L++ +  +  E N  TF  VL AC+ +  +E+G  ++   ++  +      E  S V+
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEHGISPTKEHCSCVV 617

Query: 521 DMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYH 561
           D+  + G + +A+R   ++     +  W  ++      G  H
Sbjct: 618 DLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 227/712 (31%), Positives = 370/712 (51%), Gaps = 18/712 (2%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           +TK        +   +   ++++++  ++SG  +  +    L ++  +   GL P+ F  
Sbjct: 2   YTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFAL 61

Query: 85  SSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
             + KAC +L   E+   VH   LK+G     ++ S  +  YAK G+I  AE  F +C+D
Sbjct: 62  GCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVF-ECMD 120

Query: 142 LDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQ 197
              V  + AM+ GY       +S ++   M+  G+ ++ F+    L     V     G Q
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180

Query: 198 IHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
           IHG  ++  VGF + V N L    M++Y + G  L A+K+FD + + D++SW+   A   
Sbjct: 181 IHGLIIQSEVGFSTAVMNSL----MDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLS 236

Query: 256 DGVEAFGL---FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
            G +A  +   F  L     + N  T   L    G    L +G Q     ++ G  +  S
Sbjct: 237 QGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEAS 296

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + ++LI+M+ +CG +  A  +FD   FK   + N MI+GY+ N    +AL++FC++    
Sbjct: 297 VTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLG 356

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           L  +  T +S LEA   +++ K   Q+H  I+KSGF     + S L+  Y     L++S 
Sbjct: 357 LEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSF 416

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
              + +++ + V   A+ S LV+    +EA+ L   +  +  + +   F  +   CA + 
Sbjct: 417 EFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIA 476

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR-DSLAGWNAMM 551
              Q K++H L +K  Y+  +FV SAVID Y KCG IE+A+R F +  R   +  +N M+
Sbjct: 477 AYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMV 536

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
           M YA HG   E    F KM    ++P + T+++V+++C H GLV +   +   M+  +G+
Sbjct: 537 MAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGM 596

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P  ++Y C+VDL  R G LE AK  I+ MP PP   IW+SLL+ C I+GN +LG  A  
Sbjct: 597 DPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAK 656

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           KLL+L P+N++ YVLLS +Y+  G W+D  K+RK M E+ L K+PG SWI +
Sbjct: 657 KLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 708



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/572 (22%), Positives = 262/572 (45%), Gaps = 20/572 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +K G   +P + +++++ + K  D   A R      N  +  +NA+I G A+   
Sbjct: 80  VHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSY 139

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLK--LGFSSRVYLV 116
              +LK+   ++Y+G+  DAFTF + +K C   G+L     +HG+ ++  +GFS+ V  +
Sbjct: 140 GFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAV--M 197

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K+G  + A   F    D D +++  +  G     +  +    F ++   GL+
Sbjct: 198 NSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLK 257

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  + + +    G + D+  G Q H    + G        + ++++N++ RCG    A 
Sbjct: 258 PNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEA--SVTSSLINMFSRCGAMRMAC 315

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD      + + +E I+     C   EA  LF +L     + +E T  + L +     
Sbjct: 316 LVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTE 375

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             + G+Q+     K GF     + ++L+  Y   G ++D+   F+ +   D VSW +MI+
Sbjct: 376 NQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMIS 435

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
                G+ ++A+ +   + E    P+ +   SI    +   + +Q   VHS ++K G+  
Sbjct: 436 ALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEA 495

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTI 469
              + S +I  Y KC  +  ++RV  +  + ++ +  N +     +     EA+E +  +
Sbjct: 496 HVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKM 555

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES--AVIDMYCKCG 527
             +  E + +TF  V+ AC+ +  +EQG  I   ++   Y  D   ++   ++D++ + G
Sbjct: 556 KLATLEPSQATFVSVISACSHLGLVEQGD-IFFKSMNLDYGMDPSPDNYGCLVDLFSRNG 614

Query: 528 TIEDAKRAFRKICRDSL-AGWNAMMMGYAQHG 558
            +EDAK     +      A W +++ G   HG
Sbjct: 615 FLEDAKHIIETMPFPPWPAIWRSLLNGCRIHG 646



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 214/455 (47%), Gaps = 25/455 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L+I++       +  +L+  + K      A +     Q++DII++N + +GL++  
Sbjct: 180 QIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGD 239

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +    + F +L   GL+P+  TFS L + CG    L      H +  + G S    + S
Sbjct: 240 DAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 299

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA------MVCGYVWNGEFDKSKEVFVEMR 171
             I  +++ G +  A      CL  D+  + +      M+ GY  N    ++  +F  + 
Sbjct: 300 SLINMFSRCGAMRMA------CLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLN 353

Query: 172 SLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            LGLE +E + ++ L A F   + K G Q+HG  VK GF S    ++ ++++  YV  G 
Sbjct: 354 GLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQ--GYVCSSLLKCYVGFGL 411

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             D+ + F+ +   D+VSW   I+A        EA GL   L+    + +E+   ++ + 
Sbjct: 412 LDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNC 471

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVS 344
             G    R  K + +   K+G+   V + +A+I  Y KCG + +AR +FD    F+D + 
Sbjct: 472 CAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVIL 531

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-MQVHSHI 403
           +N+M+  Y+ +G   +A++ F  M   +L P+  T  S++ A S+   ++Q  +   S  
Sbjct: 532 FNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMN 591

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +  G         CL+  + +   L ++K ++  +
Sbjct: 592 LDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETM 626



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 173/374 (46%), Gaps = 9/374 (2%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYT 278
           +Y +CG     +K+F E+   ++VSW+  ++ A    E     G++ ++       NE+ 
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 279 M---INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           +       +++GG+ +   G  +  F  KVG  +   +G+++++MY K G + DA  +F+
Sbjct: 61  LGCVTKACAALGGKEL---GLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFE 117

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +       WN+MI GY++  +  ++L +   M    +  + +T  + L+      +L  
Sbjct: 118 CMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNF 177

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             Q+H  II+S      ++++ L+  Y K      + +V   +  K+ +  N + + L  
Sbjct: 178 GRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQ 237

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                E    +  +  +  + N  TFSI+ + C    DL  G   HCLA +     +  V
Sbjct: 238 GDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASV 297

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            S++I+M+ +CG +  A   F      S+   N M+ GY  +    E  NLF  ++  G+
Sbjct: 298 TSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGL 357

Query: 576 KPDEITYLAVLTSC 589
           + DE T+ + L +C
Sbjct: 358 EADECTFSSALEAC 371



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 147/323 (45%), Gaps = 1/323 (0%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY KCG +     +F  +  K+ VSW  +++G  +NG F   L ++  M+   L+PN + 
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +  + +A +     +  + VH   +K G   +  + S ++  Y K   + +++RV   +D
Sbjct: 61  LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
                  NA+       S   E+L++   +      ++  TF   LK C  + +L  G+ 
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH L +++       V ++++DMY K G    A + F ++    +  WN +  G +Q   
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDD 240

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             E+   F+K+   G+KP+ +T+ ++L   C   L   +     C++   G+  +    +
Sbjct: 241 AREIGRFFHKLMLTGLKPNCVTF-SILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 299

Query: 620 CIVDLLGRVGLLEGAKMTIDQMP 642
            ++++  R G +  A +  D  P
Sbjct: 300 SLINMFSRCGAMRMACLVFDSAP 322


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 226/714 (31%), Positives = 368/714 (51%), Gaps = 42/714 (5%)

Query: 80   DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFS--SRVYLVSGFIENYAKSGEIVSAEM 134
            D F F +++KA  ++ +    + +H    K G +  S V + +  +  Y K G++ +A  
Sbjct: 329  DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388

Query: 135  CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
             F D  D D+V++ +M+       E++ S  +F  M S  ++   F+L +V  A   V+ 
Sbjct: 389  VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448

Query: 195  G----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            G    +Q+H + ++ G L     + NNA++ +Y R G+  DA  +F      D+VSW+  
Sbjct: 449  GVRLGKQVHAYTLRNGDLR---TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTV 505

Query: 251  IAAAC--DGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG- 306
            I++    D  E   ++  L   D  + +  T+ ++L +      LR G++I  +  + G 
Sbjct: 506  ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGD 565

Query: 307  FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
             +E   +G AL+ MY  C Q    R +FD ++ +    WN+++AGY+ N F +QAL +F 
Sbjct: 566  LIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFV 625

Query: 367  HML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M+ E    PN  T AS+L A    K       +H +I+K GF  D  + + L+  Y + 
Sbjct: 626  EMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRM 685

Query: 426  NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL------------------YR 467
              +  SK +   ++K++ V  N + +  +    + +AL L                  Y 
Sbjct: 686  GRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYE 745

Query: 468  TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
               G   + N  T   VL  CAA+  L +GK IH  A+K +   D+ V SA++DMY KCG
Sbjct: 746  DDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCG 805

Query: 528  TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG------VKPDEIT 581
             +  A R F ++   ++  WN ++M Y  HG   E   LF  M+  G      ++P+E+T
Sbjct: 806  CLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVT 865

Query: 582  YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
            Y+A+  +C H+G+V E       M   HG+ P+ +HYAC+VDLLGR G ++ A   I+ M
Sbjct: 866  YIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTM 925

Query: 642  PIPPD-AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
            P   +    W SLL AC I+ +++ G +A   L  L+P+  S YVL+SN+Y+SAG+W+  
Sbjct: 926  PSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQA 985

Query: 701  GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
              +RK+MKE  + KEPG SWI  G   H F +GD+SH QSKE+++ L  L + M
Sbjct: 986  LGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRM 1039



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/576 (23%), Positives = 263/576 (45%), Gaps = 52/576 (9%)

Query: 1   QIYSLLIKNGHHLDP--ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI++ + K GH       ++ +L++ + K  D   A +   D  +RD +++N++I+ L R
Sbjct: 351 QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCR 410

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVY 114
           F +   +L LF  +  + + P +FT  S+  AC    G ++  + VH   L+ G   R Y
Sbjct: 411 FEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTY 469

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             +  +  YA+ G +  A+  F      D V++  ++     N  F+++      M   G
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  +  +L +VL A   ++    G +IH + ++ G L    + +  A++++Y  C Q   
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIE-NSFVGTALVDMYCNCKQPKK 588

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDL-RFNDFQINEYTMINLLSSVG 287
              +FD +    V  W+  +A         +A  LF ++   ++F  N  T  ++L +  
Sbjct: 589 GRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACV 648

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             ++    + I  +  K GF +   + NAL+ MY + G+V  +++IF  +  +D VSWN+
Sbjct: 649 RCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNT 708

Query: 348 MIAGYSENGFFNQALDMFCHMLE------------------FSLIPNGYTMASILEAVSN 389
           MI G    G ++ AL++   M                        PN  T+ ++L   + 
Sbjct: 709 MITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAA 768

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
             +L +  ++H++ +K    +D ++ S L+  Y KC  LN + RV  ++  +N +  N L
Sbjct: 769 LAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVL 828

Query: 450 ASVLVYASCHAEALELYRTIW---GSCREV---NGSTFSIVLKACAAMTDLEQG------ 497
                      EALEL+R +    GS REV   N  T+  +  AC+    +++G      
Sbjct: 829 IMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHT 888

Query: 498 -KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
            KA H   ++ R D      + ++D+  + G +++A
Sbjct: 889 MKASH--GVEPRGDH----YACLVDLLGRSGRVKEA 918



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 4/263 (1%)

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +    W  ++   + +  F  A+  +  ML     P+ +   ++L+A +    L    Q+
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352

Query: 400 HSHIIKSGFLLDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           H+H+ K G     S  + + L+  YGKC  L  +++V  +I  ++ V  N++ + L    
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLALKARYDQDIFVE 516
               +L L+R +     +    T   V  AC+ +   +  GK +H   L+   D   +  
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR-NGDLRTYTN 471

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++ MY + G + DAK  F       L  WN ++   +Q+  + E       M   GV+
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531

Query: 577 PDEITYLAVLTSCCHAGLVREAR 599
           PD +T  +VL +C     +R  R
Sbjct: 532 PDGVTLASVLPACSQLERLRIGR 554


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 233/769 (30%), Positives = 386/769 (50%), Gaps = 47/769 (6%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
            ++   +K G  LD  +S  L++ + K+    +A R LFD    RD + +N ++       
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQA-RLLFDKMPERDAVLWNVMLKAYVENS 797

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN------EIVHGVCLKL---GFSS 111
                AL+ F      G  PD      ++    S   N      E V    +K+      S
Sbjct: 798  FQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS 857

Query: 112  RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++  +  +  +  +G+IV+A  CF+  L    + + ++    +                
Sbjct: 858  NIFAWNKKLTEFLHAGQIVAAIDCFKTLL-RSTIGHDSVTLVII---------------- 900

Query: 172  SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
                      L+A +GA  D+  GEQIH   +K  F   V   ++N++MN+Y + G    
Sbjct: 901  ----------LSAAVGAD-DLDLGEQIHALVIKSSFAPVVP--VSNSLMNMYSKAGVVYA 947

Query: 232  AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLS--SV 286
            A K F    E D++SW+  I++       +EA   F+DL  +  + +++T+ ++L   S 
Sbjct: 948  AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007

Query: 287  GGE-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
            G E      G Q+  +  K G +    +  ALI +Y K G++++A  +       D  SW
Sbjct: 1008 GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            N+++ GY ++    +AL+ F  M E  +  +  T+A+ ++A     +LKQ  Q+ ++ IK
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK 1127

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             GF  D  + S ++  Y KC  +  +  +  EI + + V    + S  +       AL +
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSV 1187

Query: 466  YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            Y  +  S  + +  TF+ ++KA + +T LEQGK IH   +K  Y  D FV ++++DMYCK
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCK 1247

Query: 526  CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            CG+++DA R FRK+    +  WNAM++G AQHG   E  NLF  M   G++PD++T++ V
Sbjct: 1248 CGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGV 1307

Query: 586  LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
            L++C H+GL  EA  Y   M   +G+ P++EHY+C+VD LGR G ++ A+  I  MP   
Sbjct: 1308 LSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKA 1367

Query: 646  DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
             A ++++LL AC   G+ +       KLL L P + S YVLLSN+YA++  W+DV   R 
Sbjct: 1368 SASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARN 1427

Query: 706  EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             MK K + K+PG+SWI V    H F   D SH Q+  IY+++  L + +
Sbjct: 1428 MMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRI 1476



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 316/699 (45%), Gaps = 50/699 (7%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            + ++ ++ +G   D  L+  LI+ ++K      A +    + +RD++T+N++++  A+F 
Sbjct: 632  RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA 691

Query: 61   QSG-----PALKLFDRLRYQGL---RPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR 112
             S         +LF  LR  G    R        L    G +Q +E VHG  +K+GF   
Sbjct: 692  DSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELD 751

Query: 113  VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            +++    +  Y K G +  A + F    + D V +  M+  YV N   D++   F     
Sbjct: 752  LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811

Query: 173  LGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G   +  +L  V+G  + DV    + H   VK                           
Sbjct: 812  SGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY------------------------- 846

Query: 232  AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A+KMF      ++ +W++++     A   V A   FK L  +    +  T++ +LS+  G
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L  G+QI A   K  F  VV + N+L++MY K G V  A   F      D +SWN+M
Sbjct: 907  ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 349  IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS---LKQAMQVHSHIIK 405
            I+ Y++N    +A+  F  +L   L P+ +T+AS+L A S            QVH + IK
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             G + D  + + LI  Y K   ++E++ +L      +    NA+    + ++   +ALE 
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086

Query: 466  YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            +  +      ++  T +  +KA   + +L+QGK I   A+K  ++ D++V S V+DMY K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146

Query: 526  CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            CG + +A   F +I R     W  M+ GY ++G      ++++ M   GV+PDE T+  +
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206

Query: 586  L-TSCCHAGLVREARTYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLEGAKMTIDQMP 642
            +  S C   L +  + + + +     L   L+H+    +VD+  + G ++ A     +M 
Sbjct: 1207 IKASSCLTALEQGKQIHANVVK----LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD 1262

Query: 643  IPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPD 679
            +      W ++L     +G++D  L L    +   +QPD
Sbjct: 1263 V-RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 249/487 (51%), Gaps = 34/487 (6%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            QI++L+IK+       +S +L++ ++K      A +   ++   D+I++N +IS  A+  
Sbjct: 915  QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
                A+  F  L   GL+PD FT +S+++AC +  E E       VH   +K G  +  +
Sbjct: 975  LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            + +  I+ Y+K G++  AE       D D  ++ A++ GY+ + +  K+ E F  M  +G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094

Query: 175  LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            + ++E +L   + AS    ++K+G+QI  + +K+GF + +   +++ ++++Y++CG   +
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLW--VSSGVLDMYIKCGDMPN 1152

Query: 232  AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A+++F EI+ PD V+W+  I+      D   A  ++  +R +  Q +EYT   L+ +   
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L  GKQI A   K+ +     +G +L+ MY KCG V DA  +F  +  +  V WN+M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272

Query: 349  IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
            + G +++G  ++AL++F  M    + P+  T   +L A S+S    +A +    + K+ G
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332

Query: 408  FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
               +    SCL+   G+   + E++              N +AS+   AS       +YR
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAE--------------NVIASMPFKASA-----SMYR 1373

Query: 468  TIWGSCR 474
             + G+CR
Sbjct: 1374 ALLGACR 1380



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 206/463 (44%), Gaps = 53/463 (11%)

Query: 191  DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            D+K G++ H   V  G L     +L N ++ +Y +CG    A ++FD+ ++ D+V+W+  
Sbjct: 626  DLKLGKRAHARIVTSGDLPD--RYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 251  IAAAC--------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
            +AA          + +E F LF  LR   F I   T+  LL        ++  + +  + 
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 303  YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
             K+GF   + +  AL+++Y K G V  AR +FD +  +D+V WN M+  Y EN F ++AL
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 363  DMFCHMLEFSLIPNGYTMASIL----EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
              F         P+   +  ++      VSN++  + A QV ++ +K  F  D       
Sbjct: 804  RFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRK-RHAEQVKAYAMKM-FPFDQG----- 856

Query: 419  ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
                                   N    N   +  ++A     A++ ++T+  S    + 
Sbjct: 857  ----------------------SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894

Query: 479  STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
             T  I+L A     DL+ G+ IH L +K+ +   + V +++++MY K G +  A++ F  
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954

Query: 539  ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
                 L  WN M+  YAQ+    E    F  + + G+KPD+ T  +VL +C       + 
Sbjct: 955  SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG----DE 1010

Query: 599  RTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAK 635
              Y +  S +H      G+I        ++DL  + G ++ A+
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 7/176 (3%)

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           ++  AM DL+ GK  H   + +    D ++ + +I MY KCG++  A++ F K     L 
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 546 GWNAMMMGYAQ--HGCYHEV---SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
            WN+++  YAQ     Y  V     LF  + +FG     +T   +L  C  +G V+ + T
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
                  + G    L     +V++  + GL+  A++  D+MP   DA +W  +L A
Sbjct: 739 VHGYAVKI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 224/759 (29%), Positives = 396/759 (52%), Gaps = 30/759 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+T L+  + +      A R       R + ++NAL+        +G A++++  +R
Sbjct: 94  DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153

Query: 74  YQ---GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
                G  PD  T +S++KACG+  +      VHG+ +K+G      + +  I  YAK G
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCG 213

Query: 128 EIVSAEMCF----RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            + SA   F    +D  D+   ++ ++V G V NG   ++  +F  M+S G  +N ++  
Sbjct: 214 LLDSALRVFEWLQQDARDV--ASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSV 271

Query: 184 AVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLN---NAIMNLYVRCGQKLDAVKMFD 237
           AVL    ++     G ++H   +K G      + LN   NA++ +Y + G+   A+++F 
Sbjct: 272 AVLQVCAELGLLSLGRELHAALLKCG------SELNIQCNALLVMYAKYGRVDSALRVFG 325

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           +I E D +SW+  ++         EA   F ++  + FQ +   +++L S++G    L  
Sbjct: 326 QIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNN 385

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G++  A+  K      + +GN L+ MY KCG +  +  +F+ +  +D +SW +++A +++
Sbjct: 386 GREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQ 445

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +   ++AL+M   + +  ++ +   + SILE     KS+    QVH + I++G LLD  +
Sbjct: 446 SSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG-LLDLIL 504

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + LI  YG+C   + S  +   ++KK+ V   ++ +          A+ L+  +  +  
Sbjct: 505 ENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANI 564

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + +      +L A A ++ L +GK +H   ++  +  +  V S+++DMY  CG++  A R
Sbjct: 565 QPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIR 624

Query: 535 AF-RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            F R  C+D +  W AM+     HG   +  +LF +M + G+ PD +++LA+L +C H+ 
Sbjct: 625 VFERAKCKDVVL-WTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSK 683

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV E + YL  M   + L P  EHYAC+VD+LGR G  E A   I  MP+ P + +W +L
Sbjct: 684 LVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCAL 743

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L AC ++ N  L ++A +KLLEL+PDN   Y+L+SN++A  G WN+  + R  M E+ L 
Sbjct: 744 LGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLR 803

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           K P  SWI +G   H F +GD  H  S+ I+ +L ++ E
Sbjct: 804 KNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITE 842



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 10/270 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   I+NG  LD IL   LI  + +  +F  +       + +DI+++ ++I+      
Sbjct: 489 QVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNG 547

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   A+ LF  ++   ++PD+    S++ A     SL + + VHG  ++  F     +VS
Sbjct: 548 RLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVS 607

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+  G +  A   F      D V +TAM+     +G   ++ ++F  M   GL  
Sbjct: 608 SLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTP 667

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S  A+L A   S  V+EG+      V    L     H    ++++  R GQ  +A +
Sbjct: 668 DHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHY-ACVVDILGRSGQTEEAYE 726

Query: 235 MFDEIT-EPDVVSWSERIAAACDGVEAFGL 263
               +  +P    W   +  AC     +GL
Sbjct: 727 FIKTMPMDPKSAVWCA-LLGACRVHRNYGL 755



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 23/216 (10%)

Query: 496 QGKAIHCLALKA---RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
           +G+ +H  A+       D D F+ + ++ MY +CG ++DA+R F  +   ++  WNA++ 
Sbjct: 75  EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134

Query: 553 GYAQHGCYHEVSNLFNKM---SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
            Y   G   E   ++  M   +  G  PD  T  +VL +C   G  R       C  ++H
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGR-------CGGEVH 187

Query: 610 GLIPQ--LEHYACIVDLL----GRVGLLEGAKMTIDQMPIPP-DAHIWQSLLSACTIYGN 662
           GL  +  L+    + + L     + GLL+ A    + +     D   W S++S C   G 
Sbjct: 188 GLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGR 247

Query: 663 I--DLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
               L L  G +     P N  T V +  + A  G+
Sbjct: 248 TLEALALFRGMQSAGF-PMNSYTSVAVLQVCAELGL 282


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 228/678 (33%), Positives = 363/678 (53%), Gaps = 13/678 (1%)

Query: 88  VKACGSLQE--NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD-LDN 144
           V A  +L+E   +++H   + LG  + + L    I  Y       SA++ F+   + LD 
Sbjct: 203 VTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDI 262

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGASF---DVKEGEQIHG 200
             +  ++     N  F +  EVF  +     L+ + F+  +VL A      V  G+ +H 
Sbjct: 263 TLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHT 322

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV- 258
             +K GF   V   + ++ + +Y +C    DA+K+FDE+ E DV SW+  I+    DG  
Sbjct: 323 HVIKSGFAMDVV--VMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 380

Query: 259 -EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            +A  LF++++ + F+ +  T+  ++SS      L  GK+I     + GF     + +AL
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 440

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           + MYGKCG +  A+ +F+ +  K+ VSWNSMIAGYS  G     +++F  M E  + P  
Sbjct: 441 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 500

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T++SIL A S S +L+    +H +II++    D  + S LI  Y KC  +  ++ V   
Sbjct: 501 TTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQN 560

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + K N V  N + S  V    + EAL ++  +  +  + +  TF+ VL AC+ +  LE+G
Sbjct: 561 MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKG 620

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K IH   ++++ + +  V  A++DMY KCG +++A   F ++       W +M+  Y  H
Sbjct: 621 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 680

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   E   LF KM +   KPD++T+LA+L++C HAGLV E   Y + M   +G  P +EH
Sbjct: 681 GQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEH 740

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           Y+C++DLLGRVG L  A   + + P I  D  +  +L SAC ++  +DLG   G  L+E 
Sbjct: 741 YSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEK 800

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
            PD+ STY++LSN+YAS   W++V K+R ++KE  L K PG SWI VG   H F   D S
Sbjct: 801 DPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKS 860

Query: 737 HSQSKEIYKELIKLYEHM 754
           H Q+  IY+ +  L  H+
Sbjct: 861 HPQADMIYECMSILASHV 878



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 260/506 (51%), Gaps = 15/506 (2%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           DI  +N L++   +       L++F RL  +  L+PDAFT+ S++KAC   G +   ++V
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   +K GF+  V ++S  +  YAK      A   F +  + D  ++  ++  Y  +G+ 
Sbjct: 321 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 380

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
           +K+ E+F EM+  G + +  +LT V+ +     D++ G++IH   V+ GF   +   +++
Sbjct: 381 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF--ALDGFVSS 438

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQI 274
           A++++Y +CG    A ++F++I   +VVSW+  IA      D      LF+ +     + 
Sbjct: 439 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
              T+ ++L +      L+ GK I  +  +      + + ++LI +Y KCG +  A ++F
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 558

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +   + VSWN MI+GY + G + +AL +F  M +  + P+  T  S+L A S    L+
Sbjct: 559 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 618

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  ++H+ II+S   +++ ++  L+  Y KC A++E+  + +++ +++ V   ++ +   
Sbjct: 619 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 678

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 EAL+L+  +  S  + +  TF  +L AC+    +++G   +   + A Y     
Sbjct: 679 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG-CYYFNQMIAEYGFKPA 737

Query: 515 VE--SAVIDMYCKCGTIEDAKRAFRK 538
           VE  S +ID+  + G + +A    ++
Sbjct: 738 VEHYSCLIDLLGRVGRLREAYEILQR 763



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 238/471 (50%), Gaps = 21/471 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ +IK+G  +D ++ ++ +  + K   F  A +   +   RD+ ++N +IS   +  Q
Sbjct: 320 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 379

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL+LF+ ++  G +PD+ T ++++ +C     L+  + +H   ++ GF+   ++ S 
Sbjct: 380 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 439

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G +  A+  F      + V++ +M+ GY   G+     E+F  M   G+   
Sbjct: 440 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 499

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L+++L A   S +++ G+ IHG+ ++    + +   +N+++++LY +CG    A  +
Sbjct: 500 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI--FVNSSLIDLYFKCGNIGSAENV 557

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  + + +VVSW+  I+        +EA  +F D+R    + +  T  ++L +     +L
Sbjct: 558 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 617

Query: 293 RAGKQIQAFCY--KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             GK+I  F    K+   EVV    AL+ MY KCG V++A  IF+ L  +D VSW SMIA
Sbjct: 618 EKGKEIHNFIIESKLEINEVVM--GALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIA 675

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
            Y  +G   +AL +F  M +    P+  T  +IL A S++  + +     + +I   GF 
Sbjct: 676 AYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFK 735

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCH 459
                 SCLI   G+   L E+  +L    D +  V    L S L +++CH
Sbjct: 736 PAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV---GLLSTL-FSACH 782



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 183/350 (52%), Gaps = 24/350 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  L+++G  LD  +S+ L+  + K      A       Q ++++++N++I+G +   
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 479

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
            S   ++LF R+  +G+RP   T SS++ AC    +LQ  + +HG  ++    + +++ S
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 539

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G I SAE  F++    + V++  M+ GYV  G + ++  +F +MR  G++ 
Sbjct: 540 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 599

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  + T+VL A      +++G++IH F ++      +   +  A++++Y +CG   +A+ 
Sbjct: 600 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKL--EINEVVMGALLDMYAKCGAVDEALH 657

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+++ E D VSW+  IAA        EA  LF+ ++ +D + ++ T + +LS+     +
Sbjct: 658 IFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGL 717

Query: 292 LRAGKQIQAFCY-------KVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  G      CY       + GF   V   + LI + G+ G++ +A  I 
Sbjct: 718 VDEG------CYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEIL 761


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/629 (33%), Positives = 332/629 (52%), Gaps = 74/629 (11%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
           +H   +K GF + +   + N +++ Y +CG   D  ++FD++ + ++ +W+  +      
Sbjct: 42  VHASVIKSGFSNEI--FIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99

Query: 257 GV--EAFGLFKDLRFND-------------------------------FQINEYTMINLL 283
           G   EA  LF+ +   D                               F +NEY+  ++L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S+  G   +  G Q+ +   K  F+  V IG+AL+ MY KCG VNDA+ +FD +  ++ V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SWNS+I  + +NG   +ALD+F  MLE  + P+  T+AS++ A ++  ++K   +VH  +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279

Query: 404 IKSGFLLDDSMIS-CLITTYGKCNALNESKRVL--------------------------- 435
           +K+  L +D ++S   +  Y KC+ + E++ +                            
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339

Query: 436 ----SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
               +++ ++N V  NAL +       + EAL L+  +          +F+ +LKACA +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399

Query: 492 TDLEQGKAIHCLALKARY------DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +L  G   H   LK  +      + DIFV +++IDMY KCG +E+    FRK+      
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM++G+AQ+G  +E   LF +M + G KPD IT + VL++C HAG V E R Y S M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +   G+ P  +HY C+VDLLGR G LE AK  I++MP+ PD+ IW SLL+AC ++ NI L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G     KLLE++P N   YVLLSN+YA  G W DV  +RK M+++ + K+PG SWI + G
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQG 639

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + H F   D SH + K+I+  L  L   M
Sbjct: 640 HDHVFMVKDKSHPRKKQIHSLLDILIAEM 668



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 218/467 (46%), Gaps = 48/467 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++++  TK      A         RD  T+N+++SG A+  +   AL  F  +  +G  
Sbjct: 90  NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV 149

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + ++F+S++ AC  L +      VH +  K  F S VY+ S  ++ Y+K G +  A+  
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRV 209

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
           F +  D + V++ +++  +  NG   ++ +VF  M    +E +E +L +V+ A      +
Sbjct: 210 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--------------- 237
           K G+++HG  VK   L      L+NA +++Y +C +  +A  +FD               
Sbjct: 270 KVGQEVHGRVVKNDKLRNDI-ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328

Query: 238 ----------------EITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYT 278
                           ++ E +VVSW+  IA      +  EA  LF  L+        Y+
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFM------EVVSIGNALISMYGKCGQVNDARS 332
             N+L +      L  G Q      K GF       + + +GN+LI MY KCG V +   
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  ++ +D VSWN+MI G+++NG+ N+AL++F  MLE    P+  TM  +L A  ++  
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508

Query: 393 LKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +++     S + +  G        +C++   G+   L E+K ++ E+
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 166/357 (46%), Gaps = 63/357 (17%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           + + A   K GF   + I N LI  Y KCG + D R +FD +  ++  +WNS++ G ++ 
Sbjct: 40  RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99

Query: 356 GFFNQALDMFCHMLE-------------------------FSL------IPNGYTMASIL 384
           GF ++A  +F  M E                         F++      + N Y+ AS+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A S    + + +QVHS I KS FL D  + S L+  Y KC  +N+++RV  E+  +N V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             N+L +         EAL++++ +  S  E +  T + V+ ACA+++ ++ G+ +H   
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279

Query: 505 LKA-RYDQDIFVESAVIDMYCKCGTIED-------------------------------A 532
           +K  +   DI + +A +DMY KC  I++                               A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           +  F K+   ++  WNA++ GY Q+G   E  +LF  + +  V P   ++  +L +C
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 188/402 (46%), Gaps = 55/402 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL+ K+    D  + + L+  ++K  +   A R   +  +R+++++N+LI+    F 
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC---FE 229

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRV 113
           Q+GP   AL +F  +    + PD  T +S++ AC SL   ++   VHG  +K     + +
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN----------------------------- 144
            L + F++ YAK   I  A   F D + + N                             
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIF-DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348

Query: 145 ---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQI 198
              V++ A++ GY  NGE +++  +F  ++   +    +S   +L A  D+ E   G Q 
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408

Query: 199 HGFGVKVG--FLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI--- 251
           H   +K G  F SG  + +   N+++++YV+CG   +   +F ++ E D VSW+  I   
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468

Query: 252 AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEV 310
           A    G EA  LF+++  +  + +  TMI +LS+ G    +  G+    +     G   +
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAG 351
                 ++ + G+ G + +A+S+ + +  + DSV W S++A 
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 215/675 (31%), Positives = 368/675 (54%), Gaps = 18/675 (2%)

Query: 93  SLQENEIVHGVCLKLGF-SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           SL++ +I+H   +K+ + SS  YL +  I+ YAK G +  A++ F +    + V+Y  ++
Sbjct: 22  SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81

Query: 152 CGYVWNGEFDKS--KEVFVEMRSLGLELNEFSLTAV-------LGASFDVKEGEQIHGFG 202
            G   NG    +   E+F  M +  +  +  +   V       LG +FD +   Q+H  G
Sbjct: 82  HGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDAR---QVHVLG 138

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVE 259
           +K   +  V   + ++++N Y + G   +A K+FD + E ++VSW+  I+         E
Sbjct: 139 IKTASIDDV--FVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKE 196

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A G+F  +R  +  +NE+   ++LS++     + +GKQ+     K G +E VS+ NAL++
Sbjct: 197 ALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVT 256

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY KCG +N +  +F+    K++++W+++I GYS+ G  ++AL +F  M     +P+ +T
Sbjct: 257 MYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFT 316

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +  +L+A S+  ++++  Q H +++KSG+       + L+  Y K     ++++    + 
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL 376

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           + + V   ++ +  V    + EAL +Y  +       N  T + VLKAC+ +  LEQGK 
Sbjct: 377 EPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQ 436

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH   +K     ++ + SA+  MY KCG++E+    FR++ +  +  WNAM+ G +Q+G 
Sbjct: 437 IHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGH 496

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             E   LF +M   G KPD IT++ VL++C H G+V+    Y + M D   L+P++EHYA
Sbjct: 497 GREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYA 556

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           C+VD+L R G L  AK  I+   I     +W+ LL AC  + N +LG  AG KL+EL   
Sbjct: 557 CMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSR 616

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
             S YVLLS++Y + G   DV ++R+ MK + + KE G SWI +  + H F  GD  H Q
Sbjct: 617 ESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQ 676

Query: 740 SKEIYKELIKLYEHM 754
            +EI   + +L +HM
Sbjct: 677 IEEIQGAIWRLRKHM 691



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 169/597 (28%), Positives = 279/597 (46%), Gaps = 45/597 (7%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP--ALKLFDRLRY 74
           L+  LI  + K      A     + +++++++YN LI GL+     G    L+LF R+  
Sbjct: 45  LANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIA 104

Query: 75  QGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             + PDA TF  +  A     G   +   VH + +K      V++ S  +  Y K G + 
Sbjct: 105 NNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVF 164

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A   F    + + V++T M+ GY       ++  VF  MR +   LNEF  T+VL A  
Sbjct: 165 EARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALV 224

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               V  G+Q+H   VK G L  V   + NA++ +Y +CG    ++ +F+  ++ + ++W
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVS--VLNALVTMYAKCGNLNYSLMLFEMCSDKNAITW 282

Query: 248 SERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           S  I     A D  +A  LF  + +  F  +E+T++ +L +      +  GKQ   +  K
Sbjct: 283 SALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLK 342

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            G+   +    AL+ MY K G   DAR  FD+L+  D V W S+IAGY +NG   +AL M
Sbjct: 343 SGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSM 402

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           +  M    ++PN  TMAS+L+A SN  +L+Q  Q+H+  IK G   + S+ S L T Y K
Sbjct: 403 YGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAK 462

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C +L E   +   + +++ V  NA+ S L       EALEL+  +     + +  TF  V
Sbjct: 463 CGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTV 522

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVE-----SAVIDMYCKCGTIEDAK------ 533
           L AC+ M  +++G A         +D+   V      + ++D+  + G + +AK      
Sbjct: 523 LSACSHMGIVKRGWAY----FNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESA 578

Query: 534 ---------RAFRKICRD-------SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
                    R     CR+       + AG   M +G  +   Y  +S+++  M +  
Sbjct: 579 IIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLA 635



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 227/446 (50%), Gaps = 14/446 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q++ L IK     D  + ++L++ + K      A R LFD    R+++++  +ISG A  
Sbjct: 133 QVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEA-RKLFDRMPERNLVSWTTMISGYASK 191

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA--CGSLQEN-EIVHGVCLKLGFSSRVYLV 116
             +  AL +F  +R      + F F+S++ A  C    ++ + VH V +K G    V ++
Sbjct: 192 QMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVL 251

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK G +  + M F  C D + + ++A++ GY   G+  K+ ++F +M   G  
Sbjct: 252 NALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFV 311

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +EF+L  VL A  DV   +EG+Q HG+ +K G+ + +  +   A++++Y + G   DA 
Sbjct: 312 PSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQI--YTATALVDMYAKFGFTGDAR 369

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K FD + EPD+V W+  IA         EA  ++  ++      NE TM ++L +     
Sbjct: 370 KGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLA 429

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQI A   K G    +SI +AL +MY KCG + +   IF  ++ +D VSWN+MI+
Sbjct: 430 ALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMIS 489

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G S+NG   +AL++F  M      P+  T  ++L A S+   +K+     + +     L+
Sbjct: 490 GLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLV 549

Query: 411 DD-SMISCLITTYGKCNALNESKRVL 435
                 +C++    +   LNE+K  +
Sbjct: 550 PRVEHYACMVDVLSRAGKLNEAKEFI 575



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 178/352 (50%), Gaps = 20/352 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ +++KNG      +   L++ + K  +   +        +++ IT++ALI+G ++  
Sbjct: 234 QVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAG 293

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  ALKLF ++ Y G  P  FT   ++KAC    +++E +  HG  LK G+ +++Y  +
Sbjct: 294 DSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTAT 353

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G    A   F   L+ D V +T+++ GYV NG+ +++  ++  M+   +  
Sbjct: 354 ALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILP 413

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE ++ +VL A  +   +++G+QIH   +K G   G    + +A+  +Y +CG   + V 
Sbjct: 414 NELTMASVLKACSNLAALEQGKQIHARTIKYGL--GPELSIRSALSTMYAKCGSLEEGVL 471

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + D+VSW+  I+       G EA  LF+++R    + +  T + +LS+     I
Sbjct: 472 IFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGI 531

Query: 292 LRAG-----KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           ++ G          FC     +  V     ++ +  + G++N+A+   +  I
Sbjct: 532 VKRGWAYFNMMFDEFC----LVPRVEHYACMVDVLSRAGKLNEAKEFIESAI 579



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 6/303 (1%)

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD-DSMISCLITTYGKCNALNESKR 433
           P   +  ++L   ++ KSLK+   +H+HIIK  +L   + + + LI  Y KC  L+ +K 
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAE--ALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           V   +  KN V  N L   L +         LEL+R +  +    +  TF  V  A A  
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124

Query: 492 TDLE-QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
                  + +H L +K     D+FV S++++ YCK G + +A++ F ++   +L  W  M
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + GYA      E   +F  M       +E  + +VL++      V   +  + C+   +G
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQ-VHCVVVKNG 243

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           ++  +     +V +  + G L  + M  + M    +A  W +L++  +  G+    L   
Sbjct: 244 VLEFVSVLNALVTMYAKCGNLNYSLMLFE-MCSDKNAITWSALITGYSQAGDSHKALKLF 302

Query: 671 SKL 673
           SK+
Sbjct: 303 SKM 305


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 233/769 (30%), Positives = 386/769 (50%), Gaps = 47/769 (6%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
            ++   +K G  LD  +S  L++ + K+    +A R LFD    RD + +N ++       
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQA-RLLFDKMPERDAVLWNVMLKAYVENS 797

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN------EIVHGVCLKL---GFSS 111
                AL+ F      G  PD      ++    S   N      E V    +K+      S
Sbjct: 798  FQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS 857

Query: 112  RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++  +  +  +  +G+IV+A  CF+  L    + + ++    +                
Sbjct: 858  NIFAWNKKLTEFLHAGQIVAAIDCFKTLL-RSTIGHDSVTLVII---------------- 900

Query: 172  SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
                      L+A +GA  D+  GEQIH   +K  F   V   ++N++MN+Y + G    
Sbjct: 901  ----------LSAAVGAD-DLDLGEQIHALVIKSSFAPVVP--VSNSLMNMYSKAGVVYA 947

Query: 232  AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLS--SV 286
            A K F    E D++SW+  I++       +EA   F+DL  +  + +++T+ ++L   S 
Sbjct: 948  AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007

Query: 287  GGE-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
            G E      G Q+  +  K G +    +  ALI +Y K G++++A  +       D  SW
Sbjct: 1008 GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASW 1067

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            N+++ GY ++    +AL+ F  M E  +  +  T+A+ ++A     +LKQ  Q+ ++ IK
Sbjct: 1068 NAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK 1127

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             GF  D  + S ++  Y KC  +  +  +  EI + + V    + S  +       AL +
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSV 1187

Query: 466  YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            Y  +  S  + +  TF+ ++KA + +T LEQGK IH   +K  Y  D FV ++++DMYCK
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCK 1247

Query: 526  CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            CG+++DA R FRK+    +  WNAM++G AQHG   E  NLF  M   G++PD++T++ V
Sbjct: 1248 CGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGV 1307

Query: 586  LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
            L++C H+GL  EA  Y   M   +G+ P++EHY+C+VD LGR G ++ A+  I  MP   
Sbjct: 1308 LSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKA 1367

Query: 646  DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
             A ++++LL AC   G+ +       KLL L P + S YVLLSN+YA++  W+DV   R 
Sbjct: 1368 SASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARN 1427

Query: 706  EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             MK K + K+PG+SWI V    H F   D SH Q+  IY+++  L + +
Sbjct: 1428 MMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRI 1476



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 316/699 (45%), Gaps = 50/699 (7%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            + ++ ++ +G   D  L+  LI+ ++K      A +    + +RD++T+N++++  A+F 
Sbjct: 632  RAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFA 691

Query: 61   QSG-----PALKLFDRLRYQGL---RPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR 112
             S         +LF  LR  G    R        L    G +Q +E VHG  +K+GF   
Sbjct: 692  DSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELD 751

Query: 113  VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            +++    +  Y K G +  A + F    + D V +  M+  YV N   D++   F     
Sbjct: 752  LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811

Query: 173  LGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G   +  +L  V+G  + DV    + H   VK                           
Sbjct: 812  SGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAY------------------------- 846

Query: 232  AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A+KMF      ++ +W++++     A   V A   FK L  +    +  T++ +LS+  G
Sbjct: 847  AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L  G+QI A   K  F  VV + N+L++MY K G V  A   F      D +SWN+M
Sbjct: 907  ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 349  IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS---LKQAMQVHSHIIK 405
            I+ Y++N    +A+  F  +L   L P+ +T+AS+L A S            QVH + IK
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             G + D  + + LI  Y K   ++E++ +L      +    NA+    + ++   +ALE 
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEH 1086

Query: 466  YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            +  +      ++  T +  +KA   + +L+QGK I   A+K  ++ D++V S V+DMY K
Sbjct: 1087 FSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146

Query: 526  CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            CG + +A   F +I R     W  M+ GY ++G      ++++ M   GV+PDE T+  +
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206

Query: 586  L-TSCCHAGLVREARTYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLEGAKMTIDQMP 642
            +  S C   L +  + + + +     L   L+H+    +VD+  + G ++ A     +M 
Sbjct: 1207 IKASSCLTALEQGKQIHANVVK----LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD 1262

Query: 643  IPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPD 679
            +      W ++L     +G++D  L L    +   +QPD
Sbjct: 1263 V-RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 249/487 (51%), Gaps = 34/487 (6%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            QI++L+IK+       +S +L++ ++K      A +   ++   D+I++N +IS  A+  
Sbjct: 915  QIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNN 974

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
                A+  F  L   GL+PD FT +S+++AC +  E E       VH   +K G  +  +
Sbjct: 975  LEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSF 1034

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            + +  I+ Y+K G++  AE       D D  ++ A++ GY+ + +  K+ E F  M  +G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094

Query: 175  LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            + ++E +L   + AS    ++K+G+QI  + +K+GF + +   +++ ++++Y++CG   +
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLW--VSSGVLDMYIKCGDMPN 1152

Query: 232  AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A+++F EI+ PD V+W+  I+      D   A  ++  +R +  Q +EYT   L+ +   
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L  GKQI A   K+ +     +G +L+ MY KCG V DA  +F  +  +  V WN+M
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272

Query: 349  IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
            + G +++G  ++AL++F  M    + P+  T   +L A S+S    +A +    + K+ G
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332

Query: 408  FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
               +    SCL+   G+   + E++              N +AS+   AS       +YR
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAE--------------NVIASMPFKASA-----SMYR 1373

Query: 468  TIWGSCR 474
             + G+CR
Sbjct: 1374 ALLGACR 1380



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 206/463 (44%), Gaps = 53/463 (11%)

Query: 191  DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            D+K G++ H   V  G L     +L N ++ +Y +CG    A ++FD+ ++ D+V+W+  
Sbjct: 626  DLKLGKRAHARIVTSGDLPD--RYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 251  IAAAC--------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
            +AA          + +E F LF  LR   F I   T+  LL        ++  + +  + 
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 303  YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
             K+GF   + +  AL+++Y K G V  AR +FD +  +D+V WN M+  Y EN F ++AL
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803

Query: 363  DMFCHMLEFSLIPNGYTMASIL----EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
              F         P+   +  ++      VSN++  + A QV ++ +K  F  D       
Sbjct: 804  RFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRK-RHAEQVKAYAMKM-FPFDQG----- 856

Query: 419  ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
                                   N    N   +  ++A     A++ ++T+  S    + 
Sbjct: 857  ----------------------SNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894

Query: 479  STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
             T  I+L A     DL+ G+ IH L +K+ +   + V +++++MY K G +  A++ F  
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954

Query: 539  ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
                 L  WN M+  YAQ+    E    F  + + G+KPD+ T  +VL +C       + 
Sbjct: 955  SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG----DE 1010

Query: 599  RTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAK 635
              Y +  S +H      G+I        ++DL  + G ++ A+
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 7/176 (3%)

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           ++  AM DL+ GK  H   + +    D ++ + +I MY KCG++  A++ F K     L 
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 546 GWNAMMMGYAQ--HGCYHEV---SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
            WN+++  YAQ     Y  V     LF  + +FG     +T   +L  C  +G V+ + T
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
                  + G    L     +V++  + GL+  A++  D+MP   DA +W  +L A
Sbjct: 739 VHGYAVKI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 383/736 (52%), Gaps = 15/736 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  + + GH  D I   T+I+ +        A +      N +++ +N +ISG A+  
Sbjct: 229 KVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRG 288

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
            +  A+  F  L+  GL+    +  S++ A  SL       +VH   +K G    VY+ S
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGS 348

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  ++ +A+  F    + + V + AM+ G+  NG   +  E F  M+  G + 
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQP 408

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+ T++  A   +     G Q+H   +K  F S +   + NA++++Y + G   +A K
Sbjct: 409 DEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNL--FVANALVDMYAKSGALKEARK 466

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F+ +   D VSW+  I          EAF +F+ +  N    +E ++ +++S+    + 
Sbjct: 467 QFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKE 526

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            + G+Q      KVG       G++LI MY KCG V  AR +F  + +++ VS N++IAG
Sbjct: 527 FKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAG 586

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ +    +A+ +F  +    L P   T A +L+    +  L    Q+H  ++K GFL  
Sbjct: 587 YTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645

Query: 412 DSMISC-LITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
             M+   L+  Y       +S+ + SE+   K  V   AL S     + H +AL+ Y+ +
Sbjct: 646 SEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  + +TF+ VL+ACA M+ L+ G+ +H L     ++ D    S++IDMY KCG +
Sbjct: 706 RSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDV 765

Query: 530 EDAKRAFRKICR-DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           + + + F ++ R +S+  WN+M++G A++G   E   +F +M +  + PDE+T+L VL++
Sbjct: 766 KGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAG V E R     M + + L P+++H  C+VD+LGR G L  A+  I+++    D  
Sbjct: 826 CSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM 885

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL AC  +G+   G  A +KL+EL+P + S+YVLLS LYA +  W+    LR+EMK
Sbjct: 886 LWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMK 945

Query: 709 EKFLCKEPGYSWIHVG 724
            K + K PGYSWI  G
Sbjct: 946 LKGVKKLPGYSWIEPG 961



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 292/604 (48%), Gaps = 41/604 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S  +K G  L  +L   ++  + K  +   A +     + +D+  +N+++S       
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
               ++ F  +   G+RP+ FTF+ ++ AC  LQ+    + VH    K+GF  R +   G
Sbjct: 123 FATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGG 182

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK   +  A + F   L+LD V++T ++ GYV +G   ++ +VF +M+ +G   +
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPD 242

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + +L  V+                                  N YV  G+  DA K+F +
Sbjct: 243 QIALVTVI----------------------------------NAYVALGRLADARKLFTQ 268

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I  P+VV+W+  I+         EA   F +L+    +    ++ ++LS++    +L  G
Sbjct: 269 IPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYG 328

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             + A   K G  + V +G+AL++MY KC +++ A+ +F+ L  ++ V WN+M+ G+++N
Sbjct: 329 SMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQN 388

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   + ++ F +M      P+ +T  SI  A ++   L    Q+H+ +IK+ F  +  + 
Sbjct: 389 GLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVA 448

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y K  AL E+++    +   + V  NA+    V    + EA  ++R +  +   
Sbjct: 449 NALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL 508

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  + + ++ ACA + + +QG+  HCL +K   D      S++IDMY KCG +  A+  
Sbjct: 509 PDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDV 568

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  +   ++   NA++ GY       E  +LF ++   G+KP E+T+  +L  C  A ++
Sbjct: 569 FYSMPYRNVVSINALIAGYTMSH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFML 627

Query: 596 REAR 599
              R
Sbjct: 628 NLGR 631



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 217/470 (46%), Gaps = 62/470 (13%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           IH   +K+G   G+   L N I++LYV+CG    A K F  + + DV +W+  ++   D 
Sbjct: 63  IHSKSLKIGV--GLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD- 119

Query: 258 VEAFGLFKD-------LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
               GLF         +  +  + NE+T   +LS+  G + +  GKQ+    +K+GF   
Sbjct: 120 ---HGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFR 176

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
                 LI MY KC  + DAR +FD  +  D+VSW ++IAGY  +GF  +A+ +F  M  
Sbjct: 177 SFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQR 236

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
              +P+   + ++                                   I  Y     L +
Sbjct: 237 VGHVPDQIALVTV-----------------------------------INAYVALGRLAD 261

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           ++++ ++I   N V  N + S         EA+  +  +  +  +   S+   VL A A+
Sbjct: 262 ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIAS 321

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           ++ L  G  +H  A+K   D +++V SA+++MY KC  ++ AK+ F  +   ++  WNAM
Sbjct: 322 LSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAM 381

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + G+AQ+G   EV   F+ M + G +PDE T+ ++ ++C        +  YL     LH 
Sbjct: 382 LGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACA-------SLHYLDFGGQLHT 434

Query: 611 LIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           ++ + +  +       +VD+  + G L+ A+   + M I  D   W +++
Sbjct: 435 VMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKI-HDNVSWNAII 483



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 104/213 (48%)

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           ++L  A  +HS  +K G  L   + + ++  Y KC  ++ +++  S ++KK+    N++ 
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S+ +     A  ++ +  +W      N  TF++VL AC+ + D+  GK +HC   K  + 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFG 174

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
              F +  +IDMY KC  + DA+  F          W  ++ GY + G   E   +F+KM
Sbjct: 175 FRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKM 234

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
            + G  PD+I  + V+ +    G + +AR   +
Sbjct: 235 QRVGHVPDQIALVTVINAYVALGRLADARKLFT 267



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 35/299 (11%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           + L   K I +   K+G      +GN ++ +Y KCG V+ A+  F  L  KD  +WNS++
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y ++G F   +  F  M    + PN +T A +L A S  + +    QVH  + K GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFG 174

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                   LI  Y KC  L +++ V       + V    L +  V      EA++++  +
Sbjct: 175 FRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKM 234

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                                               +  +  D      VI+ Y   G +
Sbjct: 235 -----------------------------------QRVGHVPDQIALVTVINAYVALGRL 259

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            DA++ F +I   ++  WN M+ G+A+ G   E  + F ++ K G+K    +  +VL++
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA 318



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%)

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           K  A +  L   K IH  +LK        + + ++D+Y KCG ++ A++AF ++ +  + 
Sbjct: 49  KPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            WN+++  Y  HG +  V   F  M   GV+P+E T+  VL++C
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSAC 152


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 223/729 (30%), Positives = 385/729 (52%), Gaps = 19/729 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+  LIS ++K      A       +++D++++NA+ISG A   +   A+ LF +++
Sbjct: 85  DIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQ 144

Query: 74  YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +GL+P+  +F S++ AC +   L+  E +H    K G+ S V + +  I  Y K G + 
Sbjct: 145 REGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLE 204

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---GLELNEFSLTAVLG 187
            A   F +  + + V++TAM+ GYV +G+   SKE FV  + L   G + N+ S  ++LG
Sbjct: 205 LARKVFNEMRERNVVSWTAMISGYVQHGD---SKEAFVLFQKLIRSGTQPNKVSFASILG 261

Query: 188 A---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A     D+++G ++H +  + G    V   + NA++++Y RCG   +A ++FD +  P+ 
Sbjct: 262 ACTNPNDLEQGLKLHAYIKQAGLEQEVL--VGNALISMYARCGSLANARQVFDNLRSPNR 319

Query: 245 VSWSERIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           VSW+  IA   +G   EAF LF+D++   FQ + +T  +LL+       L  GK++ +  
Sbjct: 320 VSWNAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQI 379

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            +  +   V++  ALISMY KCG + +AR +F+ +  K++VSWN+ IA    +G   +A 
Sbjct: 380 VRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAF 439

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  M    +IP+  T  ++L + ++ +  ++   +H  I + G L ++ + + LI+ Y
Sbjct: 440 QVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMY 499

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           G+C  L +++ V   I +++    NA+ +  V    +  A +L+        + +  TF 
Sbjct: 500 GRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFI 559

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            VL+A A + DL+ G+ IH L  KA  ++DI + + +I MY KCG++ DA   F+ +   
Sbjct: 560 NVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEK 619

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +  WNAM+  Y       +   LF +M   GV PD  TY +VL +C   G +   + + 
Sbjct: 620 DVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFH 679

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + + +   +     HYAC+V  LGR  LL+ A+  I+++    DA +W+SLL AC I+ N
Sbjct: 680 TQLKEA-AMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHN 738

Query: 663 IDLGLLAGSKLLELQPDNESTYV-LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           + L   A   LL+++  +       L N+YA+AG W DV  ++  M+E  L   P    I
Sbjct: 739 VGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLA-PKSCTI 797

Query: 722 HVGGYTHHF 730
            V    H F
Sbjct: 798 EVNSEFHTF 806



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 319/625 (51%), Gaps = 14/625 (2%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL E + VH       F   +YL +  I  Y+K G I  A   F+   D D V++ AM+ 
Sbjct: 66  SLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMIS 125

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLS 209
           GY  +G   ++ ++F +M+  GL+ N+ S  ++L A      ++ GEQIH    K G+ S
Sbjct: 126 GYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYES 185

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKD 266
            V  +++ A++N+Y +CG    A K+F+E+ E +VVSW+  I+      D  EAF LF+ 
Sbjct: 186 DV--NVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQK 243

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           L  +  Q N+ +  ++L +      L  G ++ A+  + G  + V +GNALISMY +CG 
Sbjct: 244 LIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGS 303

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + +AR +FD L   + VSWN+MIAGY E GF  +A  +F  M +    P+ +T AS+L  
Sbjct: 304 LANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAI 362

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++   L +  ++HS I+++ +  D ++ + LI+ Y KC +L E+++V +++ +KNAV  
Sbjct: 363 CADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSW 422

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA  +         EA ++++ +       +  TF  +L +C +  D E+G+ IH    +
Sbjct: 423 NAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQ 482

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
                +  V +A+I MY +CG + DA+  F +I R  L  WNAM+  Y QHG      +L
Sbjct: 483 WGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDL 542

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F K    G K D+ T++ VL +  +   +   R  +  + +  GL   +     ++ +  
Sbjct: 543 FIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRK-IHGLVEKAGLEKDIRILTTLIKMYS 601

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC--TIYGNIDLGLLAGSKLLELQPDNESTY 684
           + G L  A      +    D   W ++L+A   + +G   L L    +L  + PD+ +TY
Sbjct: 602 KCGSLRDAYSVFKNVQ-EKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDS-ATY 659

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKE 709
             + N  A  G      K   ++KE
Sbjct: 660 TSVLNACARLGAIEHGKKFHTQLKE 684



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 268/521 (51%), Gaps = 12/521 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S + K G+  D  +ST LI+ + K      A +   + + R+++++ A+ISG  +  
Sbjct: 173 QIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 232

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A  LF +L   G +P+  +F+S++ AC     L++   +H    + G    V + +
Sbjct: 233 DSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGN 292

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YA+ G + +A   F +    + V++ AM+ GY   G  +++  +F +M+  G + 
Sbjct: 293 ALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGY-GEGFMEEAFRLFRDMQQKGFQP 351

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F   SL A+     D+  G+++H   V+  + + V   +  A++++Y +CG   +A K
Sbjct: 352 DRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVT--VATALISMYAKCGSLEEARK 409

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+++ E + VSW+  IA  C      EAF +FK +R +D   +  T I LL+S      
Sbjct: 410 VFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPED 469

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G+ I     + G +    + NALISMYG+CG++ DAR +F  +  +D  SWN+MIA 
Sbjct: 470 FERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAA 529

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y ++G    A D+F          + YT  ++L A++N + L    ++H  + K+G   D
Sbjct: 530 YVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKD 589

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +++ LI  Y KC +L ++  V   + +K+ V  NA+ +   ++    +AL+L++ +  
Sbjct: 590 IRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRL 649

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                + +T++ VL ACA +  +E GK  H    +A  + D
Sbjct: 650 EGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETD 690



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 47/370 (12%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A  L+    +KSL +  +VH H+  + F  D  + + LI+ Y KC ++ ++  V   ++ 
Sbjct: 55  ARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMED 114

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           K+ V  NA+ S         EA++L+  +     + N ++F  +L AC     LE G+ I
Sbjct: 115 KDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQI 174

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H    KA Y+ D+ V +A+I+MYCKCG++E A++ F ++   ++  W AM+ GY QHG  
Sbjct: 175 HSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDS 234

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHY 618
            E   LF K+ + G +P+++++ ++L +C +   + +          LH  I Q  LE  
Sbjct: 235 KEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLK-------LHAYIKQAGLEQE 287

Query: 619 ACI----VDLLGRVGLLEGAKMTIDQMPIP------------------------------ 644
             +    + +  R G L  A+   D +  P                              
Sbjct: 288 VLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFMEEAFRLFRDMQQK 347

Query: 645 ---PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL-LSNLYASAGMWNDV 700
              PD   + SLL+ C    +++ G    S+++    + + T    L ++YA  G   + 
Sbjct: 348 GFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEA 407

Query: 701 GKLRKEMKEK 710
            K+  +M EK
Sbjct: 408 RKVFNQMPEK 417



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 130/276 (47%), Gaps = 12/276 (4%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + N + ++  L+ C     L +GK +H     A+++ DI++ + +I MY KCG+IEDA  
Sbjct: 48  QANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANN 107

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F+ +    +  WNAM+ GYA HG   E  +LF +M + G+KP++ +++++L S C   +
Sbjct: 108 VFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISIL-SACQTPI 166

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E    +       G    +     ++++  + G LE A+   ++M    +   W +++
Sbjct: 167 VLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR-ERNVVSWTAMI 225

Query: 655 SACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           S    +G+     +   KL+    QP+  S   +L       G   +   L + +K    
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASIL-------GACTNPNDLEQGLKLHAY 278

Query: 713 CKEPGYSW-IHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            K+ G    + VG      YA   S + +++++  L
Sbjct: 279 IKQAGLEQEVLVGNALISMYARCGSLANARQVFDNL 314


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 213/646 (32%), Positives = 362/646 (56%), Gaps = 29/646 (4%)

Query: 123 YAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           Y+K   + +A   F D + +   D V++TAM      NG   ++  +F E    GL  N 
Sbjct: 94  YSKCSAVAAARSVF-DGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNA 152

Query: 180 FSLTAVLGASFDVK----EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           F+L A   A F  +     G  + G   K+GF  G    +  A+++++ + G  +   ++
Sbjct: 153 FTLCAATQACFASELFHLAGGAVLGLVFKLGFW-GTDVSVGCALIDMFAKNGDLVAMRRV 211

Query: 236 FDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD + E  VV W+    R A +    EA  LF D+  N FQ ++YT+ ++LS+       
Sbjct: 212 FDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSF 271

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKC--GQ-VNDARSIFDYLIFKDSVSWNSMI 349
           R G+Q+ +   ++G      +   L+ MY K   GQ +++AR +F+ +   + ++W +++
Sbjct: 272 RLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALL 331

Query: 350 AGYSENGFF-NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +GY + G   NQ + +FC ML   + PN  T +S+L+A +N        Q+H+H +KS  
Sbjct: 332 SGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNL 391

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV----HINALASVLVYASCHAEALE 464
              + + + L++ Y +  ++ E++    ++ +KN V    +++       Y     E +E
Sbjct: 392 ADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERME 451

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L          ++  TF  ++ A A++  L +G+ +H L+LKA +  D  + ++++ MY 
Sbjct: 452 L---------GISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYS 502

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           +CG + DA + F ++   ++  W +M+ G A+HG       LF+ M   GVKP+++TY+A
Sbjct: 503 RCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIA 562

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL++C HAGLV+E + +   M   HGLIP++EHYAC+VDLLGR GL+E A   I++MP  
Sbjct: 563 VLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQ 622

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            DA +W++LL AC  + N+D+G +A + +++L+P + + YVLLSNLYA AG+W+ V ++R
Sbjct: 623 VDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIR 682

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             M++K L KE G SW+HV    H F AGD+SH Q++EIY +L  L
Sbjct: 683 SLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETL 728



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 284/552 (51%), Gaps = 37/552 (6%)

Query: 6   LIKNGHHL--DPILSTTLISHFTKFADFRRAFRFLFDTQN---RDIITYNALISGLARFC 60
           L++ G  L  D +++ +L++ ++K +    A R +FD      RD++++ A+ S L+R  
Sbjct: 73  LLRTGSLLETDAVVANSLLTLYSKCSAVAAA-RSVFDGMPVGLRDLVSWTAMASCLSRNG 131

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVH-------GVCLKLGF-SSR 112
               AL+LF     +GL P+AFT  +  +AC +   +E+ H       G+  KLGF  + 
Sbjct: 132 AEAEALRLFGETLEEGLLPNAFTLCAATQACFA---SELFHLAGGAVLGLVFKLGFWGTD 188

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V +    I+ +AK+G++V+    F    +   V +T ++  Y  +G  D++ E+F++M  
Sbjct: 189 VSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLE 248

Query: 173 LGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC--G 227
            G + ++++L+++L A  ++   + G+Q+H   +++G  S  C  ++  ++++Y +   G
Sbjct: 249 NGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSC--VSCGLVDMYAKSHNG 306

Query: 228 QKL-DAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           Q L +A ++F+ + + +V++W+  ++          +   LF  +     + N  T  ++
Sbjct: 307 QSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSM 366

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +        +G+QI   C K    ++  +GNAL+SMY + G + +AR  FD L  K+ 
Sbjct: 367 LKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNM 426

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VS++  + G   +G  N   D     +E  +  + +T  S++ A ++   L +  ++H+ 
Sbjct: 427 VSFSGNLDG---DGRSNTYQDYQIERMELGI--STFTFGSLISAAASVGMLTKGQRLHAL 481

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            +K+GF  D ++ + L++ Y +C  L ++ +V  E++  N +   ++ S L      A A
Sbjct: 482 SLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARA 541

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           LEL+  +  +  + N  T+  VL AC+    +++GK  H   ++  +     +E  + ++
Sbjct: 542 LELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMV 600

Query: 521 DMYCKCGTIEDA 532
           D+  + G +EDA
Sbjct: 601 DLLGRSGLVEDA 612



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 253/545 (46%), Gaps = 50/545 (9%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--EITEPDVVSWS 248
           D+  G  + G  ++ G L      + N+++ LY +C     A  +FD   +   D+VSW+
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 249 ERIAAAC---DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR-AGKQIQAFC 302
               A+C   +G   EA  LF +        N +T+     +     +   AG  +    
Sbjct: 122 A--MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLV 179

Query: 303 YKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
           +K+GF    VS+G ALI M+ K G +   R +FD L  +  V W  +I  Y+++G+ ++A
Sbjct: 180 FKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEA 239

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC-LIT 420
           +++F  MLE    P+ YT++S+L A +   S +   Q+HS  ++ G L  DS +SC L+ 
Sbjct: 240 VELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLG-LESDSCVSCGLVD 298

Query: 421 TYGKCN---ALNESKRVLSEIDKKNAVHINALASVLVY-ASCHAEALELYRTIWGSCREV 476
            Y K +   +L+ ++ V + + K N +   AL S  V   S   + + L+  +       
Sbjct: 299 MYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRP 358

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N  T+S +LKACA + D + G+ IH   +K+       V +A++ MY + G+IE+A+ AF
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAF 418

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
            ++   ++  ++  + G  +   Y +      ++ +  +     T+ +++++    G++ 
Sbjct: 419 DQLYEKNMVSFSGNLDGDGRSNTYQDY-----QIERMELGISTFTFGSLISAAASVGMLT 473

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI--WQSLL 654
           + +  L  +S   G          +V +  R G L  A    D+M    D ++  W S++
Sbjct: 474 KGQR-LHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM---NDHNVISWTSMI 529

Query: 655 SACTIYGNIDLGLLAGSKLLELQPD--------NESTYVLLSNLYASAGMWNDVGKLRKE 706
           S    +G         ++ LEL  D        N+ TY+ + +  + AG       L KE
Sbjct: 530 SGLAKHG-------YAARALELFHDMIAAGVKPNDVTYIAVLSACSHAG-------LVKE 575

Query: 707 MKEKF 711
            KE F
Sbjct: 576 GKEHF 580



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 8/179 (4%)

Query: 82  FTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           FTF SL+ A    G L + + +H + LK GF S   + +  +  Y++ G +V A   F +
Sbjct: 457 FTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDE 516

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEG 195
             D + +++T+M+ G   +G   ++ E+F +M + G++ N+ +  AVL A      VKEG
Sbjct: 517 MNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEG 576

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
           ++      K   L     H    +++L  R G   DA+   +E+  + D + W   + A
Sbjct: 577 KEHFRMMQKHHGLIPRMEHY-ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGA 634



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 53/91 (58%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L +K G   D  +  +L+S +++      A +   +  + ++I++ ++ISGLA+  
Sbjct: 477 RLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHG 536

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL+LF  +   G++P+  T+ +++ AC
Sbjct: 537 YAARALELFHDMIAAGVKPNDVTYIAVLSAC 567


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 225/727 (30%), Positives = 369/727 (50%), Gaps = 62/727 (8%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
             ++  + K ++   A     +   R+I+++N LIS L R      AL ++ R+  +G  
Sbjct: 75  NAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFV 134

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P  FT +S++ ACG+L + E     HG+ +K+G  + +Y+ +  +  YAK   I  A   
Sbjct: 135 PTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQA 194

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA------- 188
           F D  + + V++TAM+ G   + + +++  +F  M    + ++  SL++VLG        
Sbjct: 195 FGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCG 254

Query: 189 -----------SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
                      S DV  G+Q+H   +K GF S +  HLNN+++++Y + G    A  +F 
Sbjct: 255 EFGLHDSNDVLSSDV-HGQQVHCLTIKHGFESDL--HLNNSLLDMYAKNGNMDSAEMIFV 311

Query: 238 EITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            + E  VVSW+  IA         +A    + ++++ F+ +E T +N+L +         
Sbjct: 312 NMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVA--------- 362

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
                  C K G +E                     R +FD +      SWN++++GYS+
Sbjct: 363 -------CIKSGDIEA-------------------GRQMFDGMSSPSLSSWNTILSGYSQ 396

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+ +F  M   S+ P+  T+A IL +++    L+   QVH+   K+ F  D  +
Sbjct: 397 NENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYL 456

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S LI  Y KC  +  +KR+   I + + V  N++ + L   S   EA   ++ +     
Sbjct: 457 ASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGM 516

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +  +++ VL  CA ++ L QG+ +H    +  Y  D FV SA+IDMY KCG ++ A+ 
Sbjct: 517 FPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARW 576

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  +   +   WN M+ GYAQ+GC  E   L+  M   G KPD IT++AVLT+C H+GL
Sbjct: 577 VFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGL 636

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V       + M   HG+ P ++HY CI+D LGR G L  A++ ID+MP   D  IW+ LL
Sbjct: 637 VDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLL 696

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           S+C +Y ++ L   A  +L  L P N + YVLL+N+Y+S G W+D   +R+ M    + K
Sbjct: 697 SSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVK 756

Query: 715 EPGYSWI 721
           +PGYSWI
Sbjct: 757 DPGYSWI 763



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 259/575 (45%), Gaps = 64/575 (11%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + + IK G   +  +   L+  + K      A +   D    + +++ A++ GLA   Q 
Sbjct: 160 HGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV 219

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKAC--------GSLQENEI---------VHGVCL 105
             A +LF  +    +  D+ + SS++  C        G    N++         VH + +
Sbjct: 220 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 279

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K GF S ++L +  ++ YAK+G + SAEM F +  ++  V++  M+ GY    +  K+ E
Sbjct: 280 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 339

Query: 166 VFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
               M+  G E +E +   +L A   S D++ G Q                         
Sbjct: 340 YLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ------------------------- 374

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTM 279
                       MFD ++ P + SW+  ++         EA  LF++++F     +  T+
Sbjct: 375 ------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTL 422

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
             +LSS+ G  +L  G+Q+ A   K  F   + + + LI MY KCG+V  A+ IFD +  
Sbjct: 423 AIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAE 482

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            D V WNSM+AG S N    +A   F  M E  + P+ ++ A++L   +   SL Q  QV
Sbjct: 483 LDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQV 542

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           HS I + G++ D  + S LI  Y KC  ++ ++ V   +  KN V  N +        C 
Sbjct: 543 HSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCG 602

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--S 517
            EA+ LY  + GS  + +G TF  VL AC+    ++ G  I   +++  +  +  V+  +
Sbjct: 603 DEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFN-SMQQEHGVEPLVDHYT 661

Query: 518 AVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
            +ID   + G + +A+    K+ C+     W  ++
Sbjct: 662 CIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLL 696



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 217/460 (47%), Gaps = 65/460 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L IK+G   D  L+ +L+  + K  +   A     +     ++++N +I+G  +  
Sbjct: 273 QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKS 332

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           QS  A++   R++Y G  PD  T+ +++ AC                             
Sbjct: 333 QSSKAIEYLQRMQYHGFEPDEITYVNMLVAC----------------------------- 363

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               KSG+I +    F         ++  ++ GY  N    ++ ++F EM+   +  +  
Sbjct: 364 ---IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRT 420

Query: 181 SLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L  +L +      ++ G Q+H    K  F + +  +L + ++ +Y +CG+   A ++FD
Sbjct: 421 TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI--YLASGLIGMYSKCGKVEMAKRIFD 478

Query: 238 EITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            I E D+V W+  +A     + D  EAF  FK +R      ++++   +LS       L 
Sbjct: 479 RIAELDIVCWNSMMAGLSLNSLDK-EAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 537

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q+ +   + G+M    +G+ALI MY KCG V+ AR +FD ++ K++V+WN MI GY+
Sbjct: 538 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYA 597

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG  ++A+ ++  M+     P+G T  ++L A S           HS ++ +G  + +S
Sbjct: 598 QNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACS-----------HSGLVDTGIKIFNS 646

Query: 414 M------------ISCLITTYGKCNALNESKRVLSEIDKK 441
           M             +C+I + G+   L+E++ ++ ++  K
Sbjct: 647 MQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCK 686



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 168/389 (43%), Gaps = 50/389 (12%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + +LL +   ++   AGK I A   +    +   + N LI  Y KC  ++ +R +FD + 
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 339 FKD-------------------------------SVSWNSMIAGYSENGFFNQALDMFCH 367
            +D                                VSWN++I+  + NGF  +AL ++  
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M     +P  +T+AS+L A      ++   + H   IK G   +  + + L+  Y KC  
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + ++ +   ++ + N V   A+   L  +    EA  L+R +  +   V+  + S VL  
Sbjct: 188 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 247

Query: 488 CA--------------AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           C+               ++    G+ +HCL +K  ++ D+ + ++++DMY K G ++ A+
Sbjct: 248 CSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAE 307

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F  +   S+  WN M+ GY Q     +      +M   G +PDEITY+ +L +C  +G
Sbjct: 308 MIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSG 367

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIV 622
            +   R     MS      P L  +  I+
Sbjct: 368 DIEAGRQMFDGMSS-----PSLSSWNTIL 391



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 5/139 (3%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E   +  + +L+ C        GK IH   L++R   D F+ + +I+ Y KC  I+ ++R
Sbjct: 2   ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRR 61

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F ++ +  +  WNA++  Y +     +   LF +M +  +    +++  ++++    G 
Sbjct: 62  LFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI----VSWNTLISALTRNGF 117

Query: 595 VREARTYLSCMSDLHGLIP 613
            ++A      MS   G +P
Sbjct: 118 EQKALGVYYRMSR-EGFVP 135


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 223/760 (29%), Positives = 390/760 (51%), Gaps = 14/760 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLA-RFC 60
           +++L ++ G   + +++T L++ + K      A     +   ++++T+NA++   + + C
Sbjct: 80  VHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGC 139

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A++LF R+  +G++ +  TF +++ +     +L++ + +H    +   S  V++ +
Sbjct: 140 CWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNT 199

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             +  Y K G +  A   F D +   +V  + +M+  Y  +    ++  +F  M+  G  
Sbjct: 200 ALVNTYTKCGSLTDARKVF-DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGER 258

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  +  ++L A  +   ++ G+ +     +  F   +   +  A++ +Y RC    DA 
Sbjct: 259 CDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL--FVGTALITMYARCRSPEDAA 316

Query: 234 KMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F  + + ++++WS  I A  D     EA   F+ ++      N  T I+LL+      
Sbjct: 317 QVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS 376

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L    +I     + G  +  ++ NAL+++YG+C   +DAR++FD L   + +SWNSMI 
Sbjct: 377 GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIG 436

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y +    + AL +F  M +  + P+     +IL A +     +    VH  + +SG   
Sbjct: 437 IYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGG 496

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
              + + L+  Y K   L+ ++ +L E+D++     N L +         EALE Y+ + 
Sbjct: 497 SPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                V+  TF  VL AC + T L +GK IH  A++   D D+ V++A+ +MY KCG++E
Sbjct: 557 LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSME 616

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A+R F  +   S   WN M+  YAQHG   EV  L  KM + GVK + IT+++VL+SC 
Sbjct: 617 NARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCS 676

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGL+ E   Y   +    G+  + EHY C+VDLLGR G L+ A+  I +MP+ P    W
Sbjct: 677 HAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTW 736

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            SLL AC +  ++D G LA  KLLEL P N S  V+LSN+Y+  G W +  KLR+ M  +
Sbjct: 737 ASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASR 796

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + K PG S I V    H F   D+SH ++ EIY ++ +L
Sbjct: 797 RVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEEL 836



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 309/628 (49%), Gaps = 14/628 (2%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IV 100
           R+++++N +IS  + +     AL LF  +  +G+ P+A T  +++ +CGS +E     +V
Sbjct: 21  RNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILV 80

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG-E 159
           H + L+ GF     + +  +  Y K G ++ A+  F +  + + V + AM+  Y   G  
Sbjct: 81  HALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCC 140

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLN 216
           +  + E+F  M   G++ N  +   VL +  D   +++G+ IH    +      V   +N
Sbjct: 141 WKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDV--FVN 198

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQ 273
            A++N Y +CG   DA K+FD +    V +W+  I+A   +    EAF +F+ ++    +
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGER 258

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T +++L +      L+ GK ++    +  F   + +G ALI+MY +C    DA  +
Sbjct: 259 CDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQV 318

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +   + ++W+++I  ++++G   +AL  F  M +  ++PN  T  S+L   +    L
Sbjct: 319 FGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 378

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           ++  ++H  I + G     +M + L+  YG+C + ++++ V  +++  N +  N++  + 
Sbjct: 379 EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIY 438

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V    H +AL+L+RT+     + +   F  +L AC   +     K +H    ++      
Sbjct: 439 VQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSP 498

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            V++++++MY K G ++ A+   +++    +  WN ++ GYA HG   E    + K+   
Sbjct: 499 LVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLE 558

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            +  D++T+++VL +C  +  + E +   S   +  GL   +     + ++  + G +E 
Sbjct: 559 AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVEC-GLDSDVIVKNALTNMYSKCGSMEN 617

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           A+   D MPI   A  W  +L A   +G
Sbjct: 618 ARRIFDSMPI-RSAVSWNGMLQAYAQHG 644



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 262/558 (46%), Gaps = 66/558 (11%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYT 278
           +Y RCG   DAV  F +I   +VVSW+  I+A        EA  LF  +       N  T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           ++ +L+S G  R LR G  + A   + GF +   +  AL++MYGKCG + DA+S+F+ + 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 339 FKDSVSWNSMIAGYSENG-FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
            K+ V+WN+M+  YS  G  +  A+++F  ML   +  N  T  ++L +V +  +L++  
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
            +HS + +S   LD  + + L+ TY KC +L ++++V   +  ++    N++ S    + 
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              EA  +++ +       +  TF  +L AC     L+ GK +     +  ++ D+FV +
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+I MY +C + EDA + F ++ + +L  W+A++  +A HG   E    F  M + G+ P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360

Query: 578 DEITYLAVLTS-CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           + +T++++L      +GL   +R +L  +   HGL         +V++ GR    + A+ 
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHL--LITEHGLDDTTTMRNALVNVYGRCESPDDART 418

Query: 637 TIDQMPIP----------------------------------PDAHIWQSLLSACTIYGN 662
             DQ+ +P                                  PD   + ++L ACTI  +
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH 478

Query: 663 ----------IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
                     ++   L GS L++           L N+YA AG  +    + +EM E+ +
Sbjct: 479 GRTRKLVHQCVEESGLGGSPLVQTS---------LVNMYAKAGELDVAEVILQEMDEQQI 529

Query: 713 CKEPGYSW-IHVGGYTHH 729
                 +W + + GY  H
Sbjct: 530 T-----AWNVLINGYALH 542


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 229/790 (28%), Positives = 376/790 (47%), Gaps = 81/790 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+ NG  +   L + L+  + +      A R       R++ ++ A++       
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                +KLF  +  +G+RPD F F  + KAC  L+   +   V+   L +GF     +  
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ + K G +  A   F +    D   +  MV GY   GEF K+ +   +M+  G++ 
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++ +                                   NAI++ Y + GQ  +A K F 
Sbjct: 290 DQVTW----------------------------------NAIISGYAQSGQFEEASKYFL 315

Query: 238 EIT-----EPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           E+      +P+VVSW+  IA +       EA  +F+ +     + N  T+ + +S+    
Sbjct: 316 EMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNL 375

Query: 290 RILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            +LR G++I  +C KV  ++  + +GN+L+  Y KC  V  AR  F  +   D VSWN+M
Sbjct: 376 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAM 435

Query: 349 IAGYSENGFFNQALDMFCHM----------------------------LEF-------SL 373
           +AGY+  G   +A+++   M                            LEF        +
Sbjct: 436 LAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGM 495

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            PN  T++  L A    ++LK   ++H +++++   L   + S LI+ Y  C++L  +  
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V SE+  ++ V  N++ S    +     AL+L R +  S  EVN  T    L AC+ +  
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 615

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L QGK IH   ++   D   F+ +++IDMY +CG+I+ ++R F  + +  L  WN M+  
Sbjct: 616 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 675

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   +  NLF      G+KP+ IT+  +L++C H+GL+ E   Y   M   + + P
Sbjct: 676 YGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 735

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            +E YAC+VDLL R G        I++MP  P+A +W SLL AC I+ N DL   A   L
Sbjct: 736 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 795

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            EL+P +   YVL++N+Y++AG W D  K+R  MKE+ + K PG SWI V    H F  G
Sbjct: 796 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 855

Query: 734 DSSHSQSKEI 743
           D+SH   ++I
Sbjct: 856 DTSHPLMEQI 865



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 3/281 (1%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           ASIL+      +L+   QVH+ ++ +G  + + + S L+  Y +   + +++R+  ++ +
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +N     A+  +      + E ++L+  +       +   F  V KAC+ + +   GK +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           +   L   ++ +  V+ +++DM+ KCG ++ A+R F +I    +  WN M+ GY   G +
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            +     + M   GVKPD++T+ A+++    +G   EA  Y   M  L    P +  +  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332

Query: 621 IVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACT 658
           ++    + G    A     +M    + P++    S +SACT
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACT 373



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 13/233 (5%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +L+ C  + +L  G  +H   +    D   F+ S ++++YC+ G +EDA+R F K+ 
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             ++  W A+M  Y   G Y E   LF  M   GV+PD   +  V  +C      R  + 
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 601 YLSCMSDLHGLIPQLEHYAC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
               M     L    E  +C    I+D+  + G ++ A+   +++    D  +W  ++S 
Sbjct: 212 VYDYM-----LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-KDVFMWNIMVSG 265

Query: 657 CTIYGNIDLGL--LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            T  G     L  ++  KL  ++PD  +   ++S  YA +G + +  K   EM
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEM 317


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 233/753 (30%), Positives = 382/753 (50%), Gaps = 43/753 (5%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSGPA 65
           +K G   D  ++  L++ + KF   R A R LFD    RD++ +N ++            
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREA-RVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSL----QENEIVHGVCLKLGF---SSRVYLVSG 118
           L LF      GLRPD  +  +++   G      +E E V     KL      S V + + 
Sbjct: 208 LGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNK 267

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            + +Y ++GE   A  CFRD +       + + C  +           ++ + S+   LN
Sbjct: 268 TLSSYLQAGEGWEAVDCFRDMIK------SRVPCDSL----------TYIVILSVVASLN 311

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
              L            G+QIHG  V+ G+   V   + N+ +N+YV+ G    A +MF +
Sbjct: 312 HLEL------------GKQIHGAVVRFGWDQFVS--VANSAINMYVKAGSVNYARRMFGQ 357

Query: 239 ITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGG-ERILRA 294
           + E D++SW+  I+  A  G+E  +  LF DL  +    +++T+ ++L +    E     
Sbjct: 358 MKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCV 417

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+Q+     K G +    +  ALI +Y K G++ +A  +F      D  SWN+M+ G++ 
Sbjct: 418 GRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTV 477

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +  + +AL +F  M E     +  T A+  +A      L+Q  Q+H+ +IK  F  D  +
Sbjct: 478 SDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV 537

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           IS ++  Y KC  +  +++V ++I   + V    + S  V      +AL  Y  +  +  
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGV 597

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + +  TF+ ++KAC+ +T LEQGK IH   +K     D FV ++++DMY KCG IEDA  
Sbjct: 598 QPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYG 657

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            FR++   S+A WNAM++G AQHG   E  N FN+M   GV PD +T++ VL++C H+GL
Sbjct: 658 LFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGL 717

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
             +A      M   +G+ P++EHY+C+VD L R G ++ A+  +  MP    A ++++LL
Sbjct: 718 TSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLL 777

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           +AC + G+ + G     KL  + P + + YVLLSN+YA+A  W +    R  MK   + K
Sbjct: 778 NACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKK 837

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           EPG+SWI +    H F AGD SH ++  IY ++
Sbjct: 838 EPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKV 870



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 184/734 (25%), Positives = 338/734 (46%), Gaps = 58/734 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD---TQNRDIITYNALISGLA 57
           + +++++ +G + D  ++  LI+ + K      A R LFD     +RD++TYNA+++  A
Sbjct: 34  RTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSA-RKLFDITPQSDRDLVTYNAILAAYA 92

Query: 58  RFCQ------SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG 108
              +      +  A  +F  LR   +     T S L K C   GS   +E + G  +K+G
Sbjct: 93  HTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIG 152

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
               V++    +  YAK   I  A + F      D V +  M+  YV  G  D+   +F 
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFS 212

Query: 169 EMRSLGLELNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
                GL  +  S+  +L      +   +E EQ+  +  K+     VC+           
Sbjct: 213 AFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL----FVCD----------- 257

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMIN 281
                           + DV  W++ +++   A +G EA   F+D+  +    +  T I 
Sbjct: 258 ---------------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LS V     L  GKQI     + G+ + VS+ N+ I+MY K G VN AR +F  +   D
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVH 400
            +SWN++I+G + +G    +L +F  +L   L+P+ +T+ S+L A S+  +S     QVH
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  +K+G +LD  + + LI  Y K   + E++ +    D  +    NA+      +  + 
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL L+  +     + +  TF+   KA   +  L+QGK IH + +K R+  D+FV S ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG ++ A++ F +I       W  ++ G  ++G   +    +++M   GV+PDE 
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLH-GLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           T+  ++ +C     + + +   + +  L+    P +     +VD+  + G +E A     
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFR 660

Query: 640 QMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           +M     A +W +++     +GN +  L      K   + PD   T++ + +  + +G+ 
Sbjct: 661 RMNTRSVA-LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPD-RVTFIGVLSACSHSGLT 718

Query: 698 NDVGKLRKEMKEKF 711
           +D  K    M++ +
Sbjct: 719 SDAYKNFDSMQKTY 732



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 222/449 (49%), Gaps = 13/449 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +++ G      ++ + I+ + K      A R     +  D+I++N +ISG AR  
Sbjct: 318 QIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSG 377

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRVYLV 116
               +L+LF  L   GL PD FT +S+++AC SL+E+      VH   LK G     ++ 
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS 437

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+K G++  AE+ F +    D  ++ AM+ G+  +  + ++  +F  M   G +
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ +      A+     +++G+QIH   +K+ F   +   + + I+++Y++CG+   A 
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL--FVISGILDMYLKCGEMKSAR 555

Query: 234 KMFDEITEPDVVSWSERIAAACD-GVEAFGLFK--DLRFNDFQINEYTMINLLSSVGGER 290
           K+F++I  PD V+W+  I+   + G E   LF    +R    Q +EYT   L+ +     
Sbjct: 556 KVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLT 615

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GKQI A   K+       +  +L+ MY KCG + DA  +F  +  +    WN+MI 
Sbjct: 616 ALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV 675

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
           G +++G   +AL+ F  M    + P+  T   +L A S+S     A +    + K+ G  
Sbjct: 676 GLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVE 735

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
            +    SCL+    +   + E+++V+S +
Sbjct: 736 PEIEHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 255/604 (42%), Gaps = 109/604 (18%)

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-- 237
           FS+     A  D+  G++ H   V  G       ++ N ++ +Y +CG    A K+FD  
Sbjct: 17  FSILRHAIADSDLILGKRTHAVIVTSGLNPD--RYVTNNLITMYAKCGSLFSARKLFDIT 74

Query: 238 EITEPDVVSWSERIAA-ACDGV--------EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             ++ D+V+++  +AA A  G         EAF +F+ LR +      +T+  L      
Sbjct: 75  PQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLL 134

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                A + +Q +  K+G    V +  AL+++Y K  ++ +AR +FD +  +D V WN M
Sbjct: 135 YGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVM 194

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM-QVHSHIIKSG 407
           +  Y E G  ++ L +F       L P+  ++ +IL  V      ++ + QV ++  K  
Sbjct: 195 MKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL- 253

Query: 408 FLLDD--------------------------------SMISCLITTY-------GKCNAL 428
           F+ DD                                S + C   TY          N L
Sbjct: 254 FVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHL 313

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
              K++   + +       ++A+  +     A ++   R ++G  +EV+  +++ V+  C
Sbjct: 314 ELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC 373

Query: 489 A--------------------------------AMTDLEQ----GKAIHCLALKARYDQD 512
           A                                A + LE+    G+ +H  ALKA    D
Sbjct: 374 ARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD 433

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            FV +A+ID+Y K G +E+A+  F       LA WNAMM G+     Y E   LF+ M +
Sbjct: 434 SFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE 493

Query: 573 FGVKPDEITYL-AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE-HY-----ACIVDLL 625
            G K D+IT+  A   + C   LVR     L     +H ++ ++  HY     + I+D+ 
Sbjct: 494 RGEKADQITFANAAKAAGC---LVR-----LQQGKQIHAVVIKMRFHYDLFVISGILDMY 545

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA--GSKLLELQPDNEST 683
            + G ++ A+   +Q+P P D   W +++S C   G  +  L      +L  +QPD E T
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDV-AWTTVISGCVENGEEEQALFTYHQMRLAGVQPD-EYT 603

Query: 684 YVLL 687
           +  L
Sbjct: 604 FATL 607



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 13/230 (5%)

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
           C +   SL+P  +   SIL        L    + H+ I+ SG   D  + + LIT Y KC
Sbjct: 5   CSVSPSSLLPQWF---SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61

Query: 426 NALNESKRV--LSEIDKKNAVHINALASVLVYA-------SCHAEALELYRTIWGSCREV 476
            +L  ++++  ++    ++ V  NA+ +   +          H EA  ++R +  S    
Sbjct: 62  GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTH-EAFHIFRLLRQSVMLT 120

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
              T S + K C         +A+   A+K     D+FV  A++++Y K   I +A+  F
Sbjct: 121 TRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
            ++    +  WN MM  Y + G   EV  LF+   + G++PD ++   +L
Sbjct: 181 DRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 237/748 (31%), Positives = 392/748 (52%), Gaps = 25/748 (3%)

Query: 27  KFADFRRA-FRFLFDTQNRDIITYNALISG----LARFCQSGPALKLFDRLRYQG-LRPD 80
           K+  F RA  R + D  +  I T++  ++     L RFC+SG        L   G    D
Sbjct: 35  KYVIFNRASLRTVSDCVD-SITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDID 93

Query: 81  AFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
             T  S+++ C    SL++ + V       GF     L S     Y   G++  A   F 
Sbjct: 94  PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD----VK 193
           +      + +  ++     +G+F  S  +F +M S G+E++ ++ + V   SF     V 
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV-SKSFSSLRSVH 212

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIA 252
            GEQ+HGF +K GF  G  N + N+++  Y++  Q++D A K+FDE+TE DV+SW+  I 
Sbjct: 213 GGEQLHGFILKSGF--GERNSVGNSLVAFYLK-NQRVDSARKVFDEMTERDVISWNSIIN 269

Query: 253 A-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
               +G+   GL  F  +  +  +I+  T++++ +     R++  G+ + +   K  F  
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
                N L+ MY KCG ++ A+++F  +  +  VS+ SMIAGY+  G   +A+ +F  M 
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  + P+ YT+ ++L   +  + L +  +VH  I ++    D  + + L+  Y KC ++ 
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCR-EVNGSTFSIVLKA 487
           E++ V SE+  K+ +  N +       +C+A EAL L+  +    R   +  T + VL A
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGY-SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA+++  ++G+ IH   ++  Y  D  V ++++DMY KCG +  A   F  I    L  W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
             M+ GY  HG   E   LFN+M + G++ DEI+++++L +C H+GLV E   + + M  
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
              + P +EHYACIVD+L R G L  A   I+ MPIPPDA IW +LL  C I+ ++ L  
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
               K+ EL+P+N   YVL++N+YA A  W  V +LRK + ++ L K PG SWI + G  
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           + F AGDSS+ +++ I   L K+   M+
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVRARMI 776



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 200/400 (50%), Gaps = 12/400 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G      +  +L++ + K      A +   +   RD+I++N++I+G     
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +   L +F ++   G+  D  T  S+   C     +     VH + +K  FS      +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++ SA+  FR+  D   V+YT+M+ GY   G   ++ ++F EM   G+  
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++TAVL      +   EG+++H + +K   L G    ++NA+M++Y +CG   +A  
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDL-GFDIFVSNALMDMYAKCGSMQEAEL 453

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFK-DLRFNDFQINEYTMINLLSSVGGER 290
           +F E+   D++SW+  I   +  C   EA  LF   L    F  +E T+  +L +     
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G++I  +  + G+     + N+L+ MY KCG +  A  +FD +  KD VSW  MIA
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           GY  +GF  +A+ +F  M +  +  +  +  S+L A S+S
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 179/368 (48%), Gaps = 26/368 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++S+ +K     +     TL+  ++K  D   A     +  +R +++Y ++I+G AR   
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           +G A+KLF+ +  +G+ PD +T ++++  C     L E + VH    +      +++ + 
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  AE+ F +    D +++  ++ GY  N   +++  +F    +L LE  
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF----NLLLEEK 493

Query: 179 EFS-----LTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            FS     +  VL A     +FD  +G +IHG+ ++ G+ S    H+ N+++++Y +CG 
Sbjct: 494 RFSPDERTVACVLPACASLSAFD--KGREIHGYIMRNGYFSD--RHVANSLVDMYAKCGA 549

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
            L A  +FD+I   D+VSW+  IA       G EA  LF  +R    + +E + ++LL +
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609

Query: 286 VGGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSV 343
                ++  G +      ++      V     ++ M  + G +  A R I +  I  D+ 
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669

Query: 344 SWNSMIAG 351
            W +++ G
Sbjct: 670 IWGALLCG 677



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 9/255 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  + +N    D  +S  L+  + K    + A     + + +DII++N +I G ++ C
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477

Query: 61  QSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
            +  AL LF+  L  +   PD  T + ++ AC SL    +   +HG  ++ G+ S  ++ 
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK G ++ A M F D    D V++T M+ GY  +G   ++  +F +MR  G+E
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +E S  ++L A   S  V EG +          +     H    I+++  R G  + A 
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY-ACIVDMLARTGDLIKAY 656

Query: 234 KMFDEIT-EPDVVSW 247
           +  + +   PD   W
Sbjct: 657 RFIENMPIPPDATIW 671


>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
 gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
 gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
 gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
 gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
          Length = 685

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 195/572 (34%), Positives = 310/572 (54%), Gaps = 41/572 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQ 273
           NA+++   R G+  DA+ +F  I +PD  S++  +AA      G +A      +  +DF 
Sbjct: 85  NALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFV 144

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +N Y+  + LS+   E+  R G+Q+ A   K      V IG AL+ MY KC +  +A+ +
Sbjct: 145 LNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKV 204

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  ++ VSWNS+I  Y +NG  ++AL +F  M++   +P+  T+AS++ A +   + 
Sbjct: 205 FDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAG 264

Query: 394 KQAMQVHSHIIKSGFLLDDSMI--------------------------------SCLITT 421
           ++  QVH+ ++KS    +D ++                                + +IT 
Sbjct: 265 REGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITG 324

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y K   + +++ V  ++ +KN V  N L +   + S   EAL L+  +          T+
Sbjct: 325 YAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTY 384

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKA--RYDQ----DIFVESAVIDMYCKCGTIEDAKRA 535
             VL ACA + +L+ G+  H   LK   R+D     D+FV ++++DMY K G+I D  + 
Sbjct: 385 GNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKV 444

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++       WNAM++GYAQ+G   +   LF +M     +PD +T + VL++C H+GLV
Sbjct: 445 FERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLV 504

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           +E R Y   M++ HG+IP  +HY C++DLLGR G L+  +  I+ MP+ PDA +W SLL 
Sbjct: 505 KEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLG 564

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++ NID+G  A  KL EL PDN   YVLLSN+YA  G W DV ++R+ MK + + K+
Sbjct: 565 ACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQ 624

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           PG SWI +G   + F A D+ H    EI+  L
Sbjct: 625 PGCSWIEIGRKVNVFLARDNIHPCRNEIHDTL 656



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 223/504 (44%), Gaps = 81/504 (16%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF---- 69
           +  L  TL+S + +      A R      +R+  +YNAL+S  AR  ++  AL LF    
Sbjct: 49  ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108

Query: 70  ---------------------DRLRY-QGLRPD-----AFTFSSLVKACGSLQEN---EI 99
                                D LR+   +  D     A++F+S + AC S + +   E 
Sbjct: 109 DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQ 168

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH +  K    S VY+ +  ++ YAK      A+  F    + + V++ +++  Y  NG 
Sbjct: 169 VHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVG-FLSGVCNHL 215
            D++  +FV M   G   +E +L +V+ A   +   +EG Q+H   VK   F   +   L
Sbjct: 229 VDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV--L 286

Query: 216 NNAIMNLYVRCGQKLDAVKMFD-------------------------------EITEPDV 244
           NNA++++Y +CG+  +A  +FD                               ++ E +V
Sbjct: 287 NNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNV 346

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           V+W+  IA      +  EA  LF  L+        YT  N+L++      L+ G+Q    
Sbjct: 347 VAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVH 406

Query: 302 CYKVGFM------EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             K GF         V +GN+L+ MY K G ++D   +F+ +  +D+VSWN+MI GY++N
Sbjct: 407 VLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQN 466

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSM 414
           G    AL +F  ML  +  P+  TM  +L A  +S  +K+  +    + +  G +     
Sbjct: 467 GRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDH 526

Query: 415 ISCLITTYGKCNALNESKRVLSEI 438
            +C+I   G+   L E + ++  +
Sbjct: 527 YTCMIDLLGRAGHLKEVEELIENM 550



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 63/340 (18%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFK-------------------------------DSV 343
           N L+S Y + G ++DAR +FD +  +                               D  
Sbjct: 54  NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           S+N+++A  +++G    AL     M     + N Y+ AS L A ++ K+ +   QVH+ +
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
            KS    D  + + L+  Y KC    E+++V   + ++N V  N+L +         EAL
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDM 522
            L+  +       +  T + V+ ACA +    +G+ +H   +K+ R+ +D+ + +A++DM
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDM 293

Query: 523 YCKCG-------------------------------TIEDAKRAFRKICRDSLAGWNAMM 551
           Y KCG                                + DA+  F ++   ++  WN ++
Sbjct: 294 YAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLI 353

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
             YA +    E   LF ++ +  V P   TY  VL +C +
Sbjct: 354 ATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACAN 393



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 179/399 (44%), Gaps = 53/399 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L+ K+ H  D  + T L+  + K      A +       R+I+++N+LI+    + 
Sbjct: 168 QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITC---YE 224

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLG-FSSRV 113
           Q+GP   AL LF R+   G  PD  T +S++ AC  L   +E   VH   +K   F   +
Sbjct: 225 QNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDM 284

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY------------------- 154
            L +  ++ YAK G    A+  F        V+ T+M+ GY                   
Sbjct: 285 VLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEK 344

Query: 155 ---VW---------NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIH 199
               W         N E +++  +FV ++   +    ++   VL A  ++     G+Q H
Sbjct: 345 NVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAH 404

Query: 200 GFGVKVGFL--SGVCNH--LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---A 252
              +K GF   SG  +   + N+++++Y++ G   D  K+F+ +   D VSW+  I   A
Sbjct: 405 VHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYA 464

Query: 253 AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVV 311
                 +A  LF+ +  ++ + +  TMI +LS+ G   +++ G++  Q+     G +   
Sbjct: 465 QNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTR 524

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
                +I + G+ G + +   + + +  + D+V W S++
Sbjct: 525 DHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLL 563



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 31/269 (11%)

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           S F  +  +++ L++ Y +  +L++++RV   +  +N    NAL S         +AL L
Sbjct: 44  SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALAL 103

Query: 466 YRTIWGSCR-------------------------------EVNGSTFSIVLKACAAMTDL 494
           +  I    +                                +N  +F+  L ACA+    
Sbjct: 104 FGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKAS 163

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             G+ +H L  K+ +  D+++ +A++DMY KC   E+A++ F  +   ++  WN+++  Y
Sbjct: 164 RTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCY 223

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
            Q+G   E   LF +M K G  PDE+T  +V+++C      RE R   + M         
Sbjct: 224 EQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFRED 283

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           +     +VD+  + G    AK   D+M I
Sbjct: 284 MVLNNALVDMYAKCGRTWEAKCVFDRMAI 312



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 14/251 (5%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           +  T++I+ + K A+   A         ++++ +N LI+  A   +   AL+LF RL+ +
Sbjct: 316 VSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRE 375

Query: 76  GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF------SSRVYLVSGFIENYAKS 126
            + P  +T+ +++ AC    +LQ  +  H   LK GF       S V++ +  ++ Y K+
Sbjct: 376 SVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKT 435

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G I      F      DNV++ AM+ GY  NG    +  +F  M       +  ++  VL
Sbjct: 436 GSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVL 495

Query: 187 ---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EP 242
              G S  VKEG +      +   +    +H    +++L  R G   +  ++ + +  EP
Sbjct: 496 SACGHSGLVKEGRRYFQSMTEDHGIIPTRDHY-TCMIDLLGRAGHLKEVEELIENMPMEP 554

Query: 243 DVVSWSERIAA 253
           D V W+  + A
Sbjct: 555 DAVLWASLLGA 565


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 232/693 (33%), Positives = 374/693 (53%), Gaps = 13/693 (1%)

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +R  G+  D+FTF  ++KACG +++      +HG+ +K G+ S V++ +  +  YAK  +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 129 IVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           I+ A   F R     D V++ +++  Y  NG+  ++  +F EM+  G+  N ++L A L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 188 ASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A  D    K G +IH   +K   +  V  ++ NA++ ++VR G+   A ++FDE+ E D 
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDV--YVANALVAMHVRFGKMSYAARIFDELDEKDN 178

Query: 245 VSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           ++W+  IA    +G+  EA   F  L+  + + +E ++I++L++ G    L  GK+I A+
Sbjct: 179 ITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K      + IGN LI MY KC  V  A  +FD +I KD +SW ++IA Y++N    +A
Sbjct: 239 AMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEA 298

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L +   +    +  +   + S L A S  + L  A +VH + +K G L D  M + +I  
Sbjct: 299 LKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDV 357

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y  C  +N + R+   I  K+ V   ++ S  V+     EAL ++  +  +  E +  T 
Sbjct: 358 YADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITL 417

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             +L A A+++ L +GK IH    +  +  +    ++++DMY  CG++E+A + F     
Sbjct: 418 VSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS 477

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            SL  W  M+  Y  HG       LF+ M    + PD IT+LA+L +C H+GL+ E +  
Sbjct: 478 KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           L  M   + L P  EHYAC+VDLLGR   LE A   +  M I P A +W + L AC I+ 
Sbjct: 538 LETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHS 597

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N  LG +A  KLL+L PD+  +YVL+SN++A++G W DV ++R  MK   L K PG SWI
Sbjct: 598 NKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWI 657

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            VG   H F   D SH +S +IY++L ++ E +
Sbjct: 658 EVGNKVHTFLVRDKSHPESYKIYQKLAQITEKL 690



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 274/545 (50%), Gaps = 18/545 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR--DIITYNALISGLAR 58
           +I+ L+IK G+     ++ +L+S + K  D   A R LFD  N   D++++N++IS  + 
Sbjct: 31  EIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA-RKLFDRMNERNDVVSWNSIISAYSL 89

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYL 115
             Q   AL LF  ++  G+  + +T  + ++AC      ++   +H   LK      VY+
Sbjct: 90  NGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYV 149

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  + + G++  A   F +  + DN+ + +M+ G+  NG ++++ + F  ++   L
Sbjct: 150 ANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANL 209

Query: 176 ELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +E SL ++L AS  +     G++IH + +K    S +   + N ++++Y +C     A
Sbjct: 210 KPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNL--RIGNTLIDMYSKCCCVAYA 267

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD++   D++SW+  IAA        EA  L + ++     ++   + + L +  G 
Sbjct: 268 GLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGL 327

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R L   K++  +  K G  +++ + N +I +Y  CG +N A  +F+ +  KD VSW SMI
Sbjct: 328 RCLSHAKEVHGYTLKRGLSDLM-MQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMI 386

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y  NG  N+AL +F  M E S+ P+  T+ SIL A ++  +L +  ++H  I + GF+
Sbjct: 387 SCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFM 446

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           L+ S ++ L+  Y  C +L  + +V      K+ V    + +          A+EL+  +
Sbjct: 447 LEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIM 506

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCG 527
                  +  TF  +L AC+    + +GK +    +K +Y  + + E  + ++D+  +  
Sbjct: 507 EDQKLIPDHITFLALLYACSHSGLINEGKRL-LETMKCKYQLEPWPEHYACLVDLLGRAN 565

Query: 528 TIEDA 532
            +E+A
Sbjct: 566 HLEEA 570


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 236/777 (30%), Positives = 401/777 (51%), Gaps = 59/777 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK--FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++ LL K  +  +  +   LIS +          A R    T  RD+IT+NAL+S  A+
Sbjct: 187 QVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAK 246

Query: 59  FCQSGPALKLFDRLRYQG----LRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFS 110
                    LF  ++ +     LRP   TF SL+ A     GS    + V    LK G S
Sbjct: 247 KGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCS 306

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
           S +Y+ S  +  +A+ G I  A+  F    + + V    ++ G V     +++ ++FV  
Sbjct: 307 SDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGT 366

Query: 171 RSLGLELNEFSLTAVLGASFD-------VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           R+  + +N  +   +L A  +       +++G++ HG  ++ G L+ +   ++N ++N+Y
Sbjct: 367 RNT-IVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTG-LTDLKIAVSNGLVNMY 424

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
            +CG    A K+F  +   D +SW+                             T+I+ L
Sbjct: 425 AKCGAIDSASKIFQLMEATDRISWN-----------------------------TIISAL 455

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
               G ++L AG+Q+     K G     S+ N L+ MYG+CG ++D   +F+ +   D V
Sbjct: 456 DQ-NGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEV 514

Query: 344 SWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           SWNSM+    S     ++ +++F +M+   LIPN  T  ++L A+S    L+   Q H+ 
Sbjct: 515 SWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAA 574

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAE 461
           ++K G + D+ + + LI+ Y K   +N  + + S +  +++AV  N++ S  +Y     E
Sbjct: 575 VLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQE 634

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           A++    +  S + ++  TFSI+L ACA++  LE+G  +H   +++  + D+ VESA++D
Sbjct: 635 AMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVD 694

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY KCG ++ A + F  + + +   WN+M+ GYA+HG   +    F +M +    PD +T
Sbjct: 695 MYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVT 754

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +++VL++C HAGLV     Y   M D HG++PQ+EHY+C++DLLGR G ++  K  I +M
Sbjct: 755 FVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRM 813

Query: 642 PIPPDAHIWQSLLSACTIYGN---IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
           P+ P+A IW+++L AC    +   I+LG  A   LLE++P N   YVL SN +A+ GMW 
Sbjct: 814 PMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMWE 873

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVG----GYTHHFYAGDSSHSQSKEIYKELIKLY 751
           D  K R  M++  + KE G SW ++G     +   F    +  S SK+I + LI  +
Sbjct: 874 DTAKARAGMRQATVKKEAGRSWTYLGIQIFRFHFKFTMCSAERSHSKQILRILIAQW 930



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 171/736 (23%), Positives = 316/736 (42%), Gaps = 101/736 (13%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           LIK G + D  LS  L++ + K A    A R   +   R+ +++  L+SG      +  A
Sbjct: 86  LIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEA 145

Query: 66  LKLFDRLRYQ---GLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVS 117
            ++F  +  +   G RP +FTF +L++AC     + +     VHG+  K  ++S   + +
Sbjct: 146 FRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCN 205

Query: 118 GFIENYAK--SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS--- 172
             I  Y     G  + A+  F      D + + A++  Y   G+   +  +F++M+    
Sbjct: 206 ALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDS 265

Query: 173 -LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN---HLNNAIMNLYVRCGQ 228
            + L   E +  +++ A+  +  G       V V  L   C+   ++ +A+++ + R G 
Sbjct: 266 RIQLRPTEHTFGSLITAT-SLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFARHGL 324

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             +A  +F  + E + V+ +  I          EA  +F   R N   +N  T + LLS+
Sbjct: 325 IDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTR-NTIVVNADTYVVLLSA 383

Query: 286 VG----GERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +      E  LR GK+      + G  ++ +++ N L++MY KCG ++ A  IF  +   
Sbjct: 384 IAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEAT 443

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D +SWN++I+   +NG                                  K L    QVH
Sbjct: 444 DRISWNTIISALDQNGL---------------------------------KLLSAGQQVH 470

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH- 459
              +K G  LD S+ + L+  YG+C A+++  +V + +   + V  N++  V+  +    
Sbjct: 471 CDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPI 530

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           +E +E++  +       N  TF  +L A + ++ LE GK  H   LK     D  V++A+
Sbjct: 531 SETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNAL 590

Query: 520 IDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           I  Y K G +   +  F  +   RD+++ WN+M+ GY  +G   E  +    M   G   
Sbjct: 591 ISCYAKSGDMNSCEHLFSNMSGRRDAVS-WNSMISGYIYNGYLQEAMDCVWLMLHSGQIM 649

Query: 578 DEITYLAVLTSCCHAGLVREA--------RTYL-------SCMSDLHGLIPQLEH----- 617
           D  T+  +L +C     +           R++L       S + D++    ++++     
Sbjct: 650 DCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLF 709

Query: 618 ----------YACIVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNID 664
                     +  ++    R GL   A  T ++M      PD   + S+LSAC+  G ++
Sbjct: 710 NSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVE 769

Query: 665 LGLLAGSKLLELQPDN 680
            GL    +  E+ PD+
Sbjct: 770 RGL----EYFEMMPDH 781



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 135/589 (22%), Positives = 266/589 (45%), Gaps = 73/589 (12%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           E +H   +K G +  ++L +  + +YAK   + +A   F +    + V++T ++ GYV  
Sbjct: 80  ENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQ 139

Query: 158 GEFDKSKEVFVEM-RSL--GLELNEFSLTAVLGASFD-----VKEGEQIHGFGVKVGFLS 209
           G  +++  VF  M R +  G     F+   +L A  D     +    Q+HG   K  + S
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199

Query: 210 G--VCNHLNNAIMNLYVRC--GQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFG 262
              VC    NA++++Y  C  G  + A ++FD     D+++W+  +   A   D V  F 
Sbjct: 200 NTTVC----NALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFT 255

Query: 263 LFKDLRFNDFQI----NEYTMINLLS----SVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           LF D++  D +I     E+T  +L++    S G   +L    Q+     K G    + +G
Sbjct: 256 LFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVL---DQVFVSVLKSGCSSDLYVG 312

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           +AL+S + + G +++A+ IF  L  K++V+ N +I G  +     +A+ +F      +++
Sbjct: 313 SALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRN-TIV 371

Query: 375 PNGYTMASILEAVSN----SKSLKQAMQVHSHIIKSGFL-LDDSMISCLITTYGKCNALN 429
            N  T   +L A++      + L++  + H H++++G   L  ++ + L+  Y KC A++
Sbjct: 372 VNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAID 431

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            + ++   ++  + +  N + S L                     + NG      LK  +
Sbjct: 432 SASKIFQLMEATDRISWNTIISAL---------------------DQNG------LKLLS 464

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           A      G+ +HC A+K   D D  V + ++ MY +CG + D  + F  +       WN+
Sbjct: 465 A------GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNS 518

Query: 550 MM--MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           MM  M  +Q     E   +FN M + G+ P+++T++ +L +     ++   + + + +  
Sbjct: 519 MMGVMASSQ-APISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLK 577

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            HG++        ++    + G +   +     M    DA  W S++S 
Sbjct: 578 -HGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISG 625



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 17/175 (9%)

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H   +K   + D+F+ + +++ Y K   +  A R F ++ + +   W  ++ GY   G 
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141

Query: 560 YHEVSNLFNKMSK---FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
             E   +F  M +    G +P   T+  +L +C   G  R     L   + +HGL+ + E
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDR-----LGFATQVHGLLSKTE 196

Query: 617 HYA------CIVDLLGR--VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           + +       ++ + G   VG    A+   D  PI  D   W +L+S     G++
Sbjct: 197 YASNTTVCNALISMYGSCTVGPPILAQRVFDGTPI-RDLITWNALMSVYAKKGDV 250


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 220/682 (32%), Positives = 368/682 (53%), Gaps = 36/682 (5%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVS-GFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTA 149
           G L+    +H   L+     R  +V+   +  Y++ G + SA   F     L D V++TA
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD--------VKEGEQIHGF 201
           M      NG    S  +  EM   GL  N ++L A   A F               +H  
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV--- 258
           G     L G    + +A++++  R G    A K+FD + E  VV W+  I+    G    
Sbjct: 182 G-----LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAE 236

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  LF D   + F+ + YTM +++S+      +R G Q+ +   ++G      +   L+
Sbjct: 237 EAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLV 296

Query: 319 SMYGKC--GQVND-ARSIFDYLIFKDSVSWNSMIAGYSENGFF-NQALDMFCHMLEFSLI 374
            MY K   GQ  D A  +F+ +   D +SW ++I+GY ++G   N+ + +F  ML  S+ 
Sbjct: 297 DMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIK 356

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN  T +SIL++ ++        QVH+H+IKS      ++ + L++ Y +   + E++RV
Sbjct: 357 PNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRV 416

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALE--LYRTIWGSCREVNGSTFSIVLKACAAMT 492
            +++ +++ +             C  E  +  L   I      ++ STF+ ++ A A++ 
Sbjct: 417 FNQLYERSMI------------PCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVG 464

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L +G+ +H ++LKA +  D FV ++++ MY +CG +EDA R+F ++   ++  W +M+ 
Sbjct: 465 MLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMIS 524

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G A+HG      +LF+ M   GVKP+++TY+AVL++C H GLVRE + Y   M   HGLI
Sbjct: 525 GLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLI 584

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P++EHYAC+VDLL R G+++ A   I++MP+  DA +W++LL AC  + NI++G +    
Sbjct: 585 PRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKN 644

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           ++EL+P + + YVLLSNLYA AG+W++V ++R  M++  L KE G SW+ V   TH F A
Sbjct: 645 VVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRA 704

Query: 733 GDSSHSQSKEIYKELIKLYEHM 754
           GD+SH ++++IY +L  L   +
Sbjct: 705 GDTSHPRAQDIYGKLDTLVRQI 726



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 250/502 (49%), Gaps = 30/502 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARFCQSGPALKLFDR 71
           D +++ +L++ +++      A R +FD     RDI+++ A+ S LAR      +L L   
Sbjct: 83  DAVVANSLLTLYSRCGAVASA-RNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGE 141

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQ----ENEIVHGVCLKLG-FSSRVYLVSGFIENYAKS 126
           +   GL P+A+T  +   AC   +       +V G+  K+G + + V + S  I+  A++
Sbjct: 142 MLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARN 201

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G++ SA   F   ++   V +T ++  YV     +++ E+F++    G E + +++++++
Sbjct: 202 GDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMI 261

Query: 187 GASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC--GQKLD-AVKMFDEIT 240
            A  +   V+ G Q+H   +++G  S  C  ++  ++++Y +   GQ +D A K+F+ + 
Sbjct: 262 SACTELGSVRLGLQLHSLALRMGLASDAC--VSCGLVDMYAKSNIGQAMDYANKVFERMP 319

Query: 241 EPDVVSWSERIAAACD-GVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           + DV+SW+  I+     GV+      LF ++     + N  T  ++L S        +G+
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGR 379

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           Q+ A   K       ++GNAL+SMY + G + +AR +F+ L  +      SMI   +E  
Sbjct: 380 QVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER------SMIPCITEGR 433

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
            F   LD     ++  +  +  T AS++ A ++   L +  Q+H+  +K+GF  D  + +
Sbjct: 434 DF--PLDHRIVRMDVGI--SSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSN 489

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ Y +C  L ++ R  +E+  +N +   ++ S L        AL L+  +  +  + 
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549

Query: 477 NGSTFSIVLKACAAMTDLEQGK 498
           N  T+  VL AC+ +  + +GK
Sbjct: 550 NDVTYIAVLSACSHVGLVREGK 571



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 118/264 (44%), Gaps = 26/264 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++ +IK+       +   L+S + +     + RR F  L++      IT         
Sbjct: 380 QVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCIT--------- 430

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
                G    L  R+    +   + TF+SL+ A  S   L + + +H + LK GF S  +
Sbjct: 431 ----EGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRF 486

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y++ G +  A   F +  D + +++T+M+ G   +G  +++  +F +M   G
Sbjct: 487 VSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTG 546

Query: 175 LELNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           ++ N+ +  AVL A      V+EG E         G +  + ++    +++L  R G   
Sbjct: 547 VKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA--CMVDLLARSGIVK 604

Query: 231 DAVKMFDEIT-EPDVVSWSERIAA 253
           +A++  +E+  + D + W   + A
Sbjct: 605 EALEFINEMPLKADALVWKTLLGA 628


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 191/561 (34%), Positives = 319/561 (56%), Gaps = 9/561 (1%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G Q+H + +K G  SG+    +N ++++Y +C + L A K+FD + E +VVSWS  ++ 
Sbjct: 24  QGGQVHCYLLKSG--SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSG 81

Query: 254 AC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                D   +  LF ++       NE+T    L + G    L  G QI  FC K+GF  +
Sbjct: 82  HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V +GN+L+ MY KCG++N+A  +F  ++ +  +SWN+MIAG+   G+ ++ALD F  M E
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201

Query: 371 FSLI--PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS--MISCLITTYGKCN 426
            ++   P+ +T+ S+L+A S++  +    Q+H  +++SGF    S  +   L+  Y KC 
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L  +++   +I +K  +  ++L           EA+ L++ +     +++    S ++ 
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
             A    L QGK +  LA+K     +  V ++V+DMY KCG +++A++ F ++    +  
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W  ++ GY +HG   +   +F +M +  ++PDE+ YLAVL++C H+G+++E     S + 
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           + HG+ P++EHYAC+VDLLGR G L+ AK  ID MPI P+  IWQ+LLS C ++G+I+LG
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELG 501

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
              G  LL +   N + YV++SNLY  AG WN+ G  R+    K L KE G SW+ +   
Sbjct: 502 KEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIERE 561

Query: 727 THHFYAGDSSHSQSKEIYKEL 747
            H F +G+ SH  +  I + L
Sbjct: 562 VHFFRSGEDSHPLTPVIQETL 582



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 250/458 (54%), Gaps = 12/458 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  L+K+G  L+ I S  LI  + K  +   A++       R++++++AL+SG     
Sbjct: 27  QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               +L LF  +  QG+ P+ FTFS+ +KACG   +L++   +HG CLK+GF   V + +
Sbjct: 87  DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE- 176
             ++ Y+K G I  AE  FR  +D   +++ AM+ G+V  G   K+ + F  M+   ++ 
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206

Query: 177 -LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +EF+LT++L A      +  G+QIHGF V+ GF       +  ++++LYV+CG    A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K FD+I E  ++SWS  I   A   + VEA GLFK L+  + QI+ + + +++      
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            +LR GKQ+QA   K+      S+ N+++ MY KCG V++A   F  +  KD +SW  +I
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
            GY ++G   +++ +F  ML  ++ P+     ++L A S+S  +K+  ++ S ++++ G 
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                  +C++   G+   L E+K ++  +  K  V I
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 21/294 (7%)

Query: 373 LIPNG-YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           +IPN    + SIL   +      Q  QVH +++KSG  L+    + LI  Y KC     +
Sbjct: 1   MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +V   + ++N V  +AL S  V       +L L+  +       N  TFS  LKAC  +
Sbjct: 61  YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             LE+G  IH   LK  ++  + V ++++DMY KCG I +A++ FR+I   SL  WNAM+
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVK--PDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
            G+   G   +  + F  M +  +K  PDE T  ++L +C   G++   +        +H
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK-------QIH 233

Query: 610 GLIPQLEHY--------ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLL 654
           G + +   +          +VDL  + G L  A+   DQ  I     I W SL+
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ--IKEKTMISWSSLI 285


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 236/752 (31%), Positives = 393/752 (52%), Gaps = 28/752 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D +L T +I+ ++       + R +FD  + +++  +NA+IS  +R       L++F ++
Sbjct: 116 DDVLCTRVITMYSMCGSPDDS-RSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKM 174

Query: 73  RYQ-GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
             + GL PD FTF  +VKAC  + E ++   VHG+ +K      V++ +  +  Y  +G 
Sbjct: 175 ITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGS 234

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA---- 184
           +  A   F+   + + V++ +M+  +  NG    S+E F+ +  +  + +E + T     
Sbjct: 235 VSDALRVFKIMPERNLVSWNSMIRVFSDNG---LSEECFLLLGQMMEKDDEIAFTPDVAT 291

Query: 185 ------VLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
                 V     ++  G+ +HG  +K+     V   +NNA+M++Y +CG   DA  +F  
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV--VNNALMDMYSKCGCINDAQVIFKL 349

Query: 239 ITEPDVVSWSERI---AAACDGVEAFGLFKDLRFN--DFQINEYTMINLLSSVGGERILR 293
               +VVSW+  +   +AA D  + F L + +     D + +E T++N +     E +L 
Sbjct: 350 NNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLP 409

Query: 294 AGKQIQAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             K++  +  K  F+     + NA ++ Y KCG ++ A  +F  +  K   SWN++I GY
Sbjct: 410 NLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGY 469

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           S++     +LD +  M    L+P+ +T+ S+L A S  KSLK   +VH  II++    D 
Sbjct: 470 SQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDS 529

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            +   L++ Y  C  L+ +  +   ++ K  V  N + +  +       AL L+R +   
Sbjct: 530 FVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLY 589

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             +    +   V  AC+ +  L  G+  H  ALK   + + F+  +VIDMY K G++ ++
Sbjct: 590 GVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMES 649

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F  +   S+A WNAM+MGY  HG   E   LF +M + G  PDE+T+L VLT+C H+
Sbjct: 650 FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHS 709

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL-EGAKMTIDQMPIPPDAHIWQ 651
           GLV E  TYL  M  L G+ P L+HYAC++D+L R G L E  K+  ++M   P   IW 
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            LLS+C I+ N+++G    +KL   +P+    YVLLSNLYA +G W++V K+R+ MKE  
Sbjct: 770 FLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMS 829

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           L K+ G SWI + G    F AG+SS    +EI
Sbjct: 830 LRKDAGCSWIELNGKVFSFVAGESSLDGFEEI 861



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 143/298 (47%), Gaps = 21/298 (7%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H + +++   ++ + K      A R     +++ + ++NALI G ++      +L  + +
Sbjct: 425 HNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQ 484

Query: 72  LRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           ++  GL PD FT  SL+ AC    SL+  + VHG+ ++       ++    +  Y   GE
Sbjct: 485 MKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGE 544

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + +A + F    D   V++  MV GY+ NG  +++  +F +M   G++  E S+ +V GA
Sbjct: 545 LSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGA 604

Query: 189 SF---DVKEGEQIHGFGVKVGFLSGVCNHLNNA-----IMNLYVRCGQKLDAVKMFDEIT 240
                 ++ G + HG+ +K       C   +NA     ++++Y + G  +++ K+F+ + 
Sbjct: 605 CSLLPSLRLGREAHGYALK-------CLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLK 657

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           E  V SW+  +          EA  LF++++      +E T + +L++     ++  G
Sbjct: 658 ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEG 715



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 486 KACAAMTDLEQGKAIHCLALK-ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           +A     D++ G+ IH L  + AR   D  + + VI MY  CG+ +D++  F  + + +L
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
             WNA++  Y+++  YH V  +F KM ++ G+ PD  T+  V+ +C  AG V E +  L+
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKAC--AG-VSEVQVGLA 205

Query: 604 CMSDLHGLI 612
               +HGL+
Sbjct: 206 ----VHGLV 210


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 218/639 (34%), Positives = 340/639 (53%), Gaps = 19/639 (2%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   +KLGF + ++  +  I  Y K G +      F +    + V++T +V G V NGE
Sbjct: 98  IHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGE 157

Query: 160 FDKSKEVFVEMRSLGLELNEFSL------TAVLGASFDVKE---GEQIHGFGVK--VGFL 208
           F+    V++EM   GL  NEF+L       A LG    V     G QIHG  ++  VGF 
Sbjct: 158 FEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFS 217

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGL---FK 265
           + V N L    M++Y + G  L A+K+FD + + D++SW+   A    G +A  +   F 
Sbjct: 218 TAVMNSL----MDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFH 273

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            L     + N  T   L    G    L +G Q     ++ G  +  S+ ++LI+M+ +CG
Sbjct: 274 KLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCG 333

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            +  A  +FD   FK   + N MI+GY+ N    +AL++FC++    L  +  T +S LE
Sbjct: 334 AMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALE 393

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A   +++ K   Q+H  I+KSGF     + S L+  Y     L++S    + +++ + V 
Sbjct: 394 ACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVS 453

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
             A+ S LV+    +EA+ L   +  +  + +   F  +   CA +    Q K++H L +
Sbjct: 454 WGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVV 513

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR-DSLAGWNAMMMGYAQHGCYHEVS 564
           K  Y+  +FV SAVID Y KCG IE+A+R F +  R   +  +N M+M YA HG   E  
Sbjct: 514 KMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAV 573

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
             F KM    ++P + T+++V+++C H GLV +   +   M+  +G+ P  ++Y C+VDL
Sbjct: 574 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 633

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
             R G LE AK  I+ MP PP   IW+SLL+ C I+GN +LG  A  KLL+L P+N++ Y
Sbjct: 634 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAY 693

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           VLLS +Y+  G W+D  K+RK M E+ L K+PG SWI +
Sbjct: 694 VLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 732



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 214/455 (47%), Gaps = 25/455 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L+I++       +  +L+  + K      A +     Q++DII++N + +GL++  
Sbjct: 204 QIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGD 263

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +    + F +L   GL+P+  TFS L + CG    L      H +  + G S    + S
Sbjct: 264 DAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 323

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA------MVCGYVWNGEFDKSKEVFVEMR 171
             I  +++ G +  A      CL  D+  + +      M+ GY  N    ++  +F  + 
Sbjct: 324 SLINMFSRCGAMRMA------CLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLN 377

Query: 172 SLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            LGLE +E + ++ L A F   + K G Q+HG  VK GF S    ++ ++++  YV  G 
Sbjct: 378 GLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQ--GYVCSSLLKCYVGFGL 435

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             D+ + F+ +   D+VSW   I+A        EA GL   L+    + +E+   ++ + 
Sbjct: 436 LDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNC 495

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVS 344
             G    R  K + +   K+G+   V + +A+I  Y KCG + +AR +FD    F+D + 
Sbjct: 496 CAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVIL 555

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-MQVHSHI 403
           +N+M+  Y+ +G   +A++ F  M   +L P+  T  S++ A S+   ++Q  +   S  
Sbjct: 556 FNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMN 615

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +  G         CL+  + +   L ++K ++  +
Sbjct: 616 LDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETM 650



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 230/512 (44%), Gaps = 35/512 (6%)

Query: 195 GEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           G QIH   +K+GF    CN +   N ++ +Y +CG     +K+F E+   ++VSW+  ++
Sbjct: 95  GSQIHAQIIKLGF----CNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVS 150

Query: 253 AACDGVE---AFGLFKDLRFNDFQINEYTM---INLLSSVGGERI---LRAGKQIQAFCY 303
            A    E     G++ ++       NE+ +       +++GG  +   L  G+QI     
Sbjct: 151 GAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLII 210

Query: 304 K--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
           +  VGF   V   N+L+ MY K G    A  +FD L  KD +SWN++ AG S+     + 
Sbjct: 211 QSEVGFSTAVM--NSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREI 268

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
              F  ++   L PN  T + +      +  L   +Q H    + G   + S+ S LI  
Sbjct: 269 GRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINM 328

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           + +C A+  +  V      K+    N + S       +AEAL L+  + G   E +  TF
Sbjct: 329 FSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTF 388

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S  L+AC    + + G+ +H   +K+ +    +V S+++  Y   G ++D+   F  + R
Sbjct: 389 SSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVER 448

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             L  W AM+      G   E   L N++ + G KPDE  + ++   C      R+ ++ 
Sbjct: 449 LDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKS- 507

Query: 602 LSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
                 +H L+ ++ + A       ++D   + G +E A+   DQ     D  ++ +++ 
Sbjct: 508 ------VHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVM 561

Query: 656 ACTIYGNIDLGL--LAGSKLLELQPDNESTYV 685
           A   +G +   +      KL  L+P +++T+V
Sbjct: 562 AYAHHGLVREAVETFEKMKLATLEP-SQATFV 592



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/579 (21%), Positives = 255/579 (44%), Gaps = 26/579 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK G   D      LI  +TK        +   +   ++++++  ++SG  +  
Sbjct: 97  QIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNG 156

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---------GSLQENEIVHGVCLK--LGF 109
           +    L ++  +   GL P+ F    + KAC         G+L     +HG+ ++  +GF
Sbjct: 157 EFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGF 216

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           S+ V  ++  ++ Y K+G  + A   F    D D +++  +  G     +  +    F +
Sbjct: 217 STAV--MNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHK 274

Query: 170 MRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           +   GL+ N  + + +    G + D+  G Q H    + G        + ++++N++ RC
Sbjct: 275 LMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEA--SVTSSLINMFSRC 332

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
           G    A  +FD      + + +E I+     C   EA  LF +L     + +E T  + L
Sbjct: 333 GAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSAL 392

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            +       + G+Q+     K GF     + ++L+  Y   G ++D+   F+ +   D V
Sbjct: 393 EACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLV 452

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW +MI+     G+ ++A+ +   + E    P+ +   SI    +   + +Q   VHS +
Sbjct: 453 SWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLV 512

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK-KNAVHINALASVLVYASCHAEA 462
           +K G+     + S +I  Y KC  +  ++RV  +  + ++ +  N +     +     EA
Sbjct: 513 VKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREA 572

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES--AVI 520
           +E +  +  +  E + +TF  V+ AC+ +  +EQG  I   ++   Y  D   ++   ++
Sbjct: 573 VETFEKMKLATLEPSQATFVSVISACSHLGLVEQGD-IFFKSMNLDYGMDPSPDNYGCLV 631

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           D++ + G +EDAK     +        W +++ G   HG
Sbjct: 632 DLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHG 670



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 6/324 (1%)

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+ +   +   L+     + +  G QI A   K+GF   +   N LI MY KCG +    
Sbjct: 72  FRNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGL 131

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN-- 389
            +F  +  K+ VSW  +++G  +NG F   L ++  M+   L+PN + +  + +A +   
Sbjct: 132 KVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALG 191

Query: 390 ----SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
                 +L    Q+H  II+S      ++++ L+  Y K      + +V   +  K+ + 
Sbjct: 192 GCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIIS 251

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            N + + L       E    +  +  +  + N  TFSI+ + C    DL  G   HCLA 
Sbjct: 252 WNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAF 311

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           +     +  V S++I+M+ +CG +  A   F      S+   N M+ GY  +    E  N
Sbjct: 312 RFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALN 371

Query: 566 LFNKMSKFGVKPDEITYLAVLTSC 589
           LF  ++  G++ DE T+ + L +C
Sbjct: 372 LFCNLNGLGLEADECTFSSALEAC 395


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 243/787 (30%), Positives = 408/787 (51%), Gaps = 43/787 (5%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
            QI+ L+ K  +  D ++   LIS +    D     R +FD    R+ I++N++IS  +R 
Sbjct: 668  QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRR 727

Query: 60   CQSGPALKLFDRLRYQGL----RPDAFTFSSLVKA-CGSLQENEIVHGVCL--------- 105
                 A  LF  ++ +GL    +P+ +TF SL+ A C S+       G+C+         
Sbjct: 728  GDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVD-----FGLCVLEQMLARVE 782

Query: 106  KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
            K GF   +Y+ S  +  +A+ G    A+  F      + V+   ++ G V   + + + +
Sbjct: 783  KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 842

Query: 166  VFVEMRSLGLELNEFSLTAVLGA--SFDV-----KEGEQIHGFGVKVGFLSGVCNHLNNA 218
            VF EM+ L + +N  S   +L A   F V     ++G ++H   ++ G L+     + N 
Sbjct: 843  VFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG-LNDNKVAIGNG 900

Query: 219  IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDF 272
            ++N+Y + G   DA  +F+ + E D VSW+  I+       + D  E+F     +R    
Sbjct: 901  LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESF---LRMRRTGS 957

Query: 273  QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
              + +T+I+ LSS      +  G+QI     K+G    VS+ NAL+++Y + G   +   
Sbjct: 958  MPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLK 1017

Query: 333  IFDYLIFKDSVSWNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F  +   D VSWNS+I   S++    +QA+  F  M+      +  T  +IL AVS+  
Sbjct: 1018 VFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLS 1077

Query: 392  SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALA 450
              + + Q+H+ ++K     D ++ + L++ YGKC  +NE +++ + + + ++ V  N++ 
Sbjct: 1078 LHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 1137

Query: 451  SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
            S  ++     +A++L   +    + ++  TF+ VL ACA++  LE+G  +H   ++A  +
Sbjct: 1138 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACME 1197

Query: 511  QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
             D+ V SA++DMY KCG I+ A R F  +   ++  WN+M+ GYA+HG   +   LF +M
Sbjct: 1198 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 1257

Query: 571  SKFGVKPDEIT-YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
               G  PD +   L VL++C H G V E   +   MS+++ L P++EH++C+VDLLGR G
Sbjct: 1258 MLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAG 1317

Query: 630  LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLL 687
             L+     I+ MP+ P+  IW+++L AC      N +LG  A   LLEL+P N   YVLL
Sbjct: 1318 KLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLL 1377

Query: 688  SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            +N+YAS   W DV K R  MKE  + KE G SW+ +    H F AGD  H +   IY +L
Sbjct: 1378 ANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKL 1437

Query: 748  IKLYEHM 754
             +L   M
Sbjct: 1438 RELNRKM 1444



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 177/718 (24%), Positives = 337/718 (46%), Gaps = 55/718 (7%)

Query: 7    IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
            IK G   +  LS TLI+ + +  D   A +   +  NR+++T+  LISG  +  +   A 
Sbjct: 571  IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 630

Query: 67   KLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--------VHGVCLKLGFSSRVYLVSG 118
              F  +   G  P+ + F S ++AC   QE+          +HG+  K  + S V + + 
Sbjct: 631  ARFRDMVRAGFIPNHYAFGSALRAC---QESGPSGCKLGVQIHGLISKTRYGSDVVVCNV 687

Query: 119  FIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-- 175
             I  Y    +  +      D + + N +++ +++  Y   G+   + ++F  M+  GL  
Sbjct: 688  LISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGF 747

Query: 176  --ELNEFSLTAVLGAS-----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
              + NE++  +++ A+     F +   EQ+     K GFL  +  ++ +A+++ + R G 
Sbjct: 748  SFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDL--YVGSALVSGFARFGL 805

Query: 229  KLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
              DA  +F+++   +VVS +  +        G  A  +F +++ +   IN  + + LLS+
Sbjct: 806  TDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSA 864

Query: 286  VGGERIL----RAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
                 +L    R G+++ A   + G  +  V+IGN L++MY K G + DA S+F+ ++ K
Sbjct: 865  FSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 924

Query: 341  DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
            DSVSWNS+I+G  +N     A + F  M     +P+ +T+ S L + ++   +    Q+H
Sbjct: 925  DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH 984

Query: 401  SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
               +K G   D S+ + L+  Y +     E  +V S + + + V  N++   L  +    
Sbjct: 985  CDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASV 1044

Query: 461  EA-----LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                   LE+ R  WG  R     TF  +L A ++++  E    IH L LK     D  +
Sbjct: 1045 SQAVKYFLEMMRGGWGLSR----VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAI 1100

Query: 516  ESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
             +A++  Y KCG + + ++ F ++   RD ++ WN+M+ GY  +   H+  +L   M + 
Sbjct: 1101 GNALLSCYGKCGEMNECEKIFARMSETRDEVS-WNSMISGYIHNELLHKAMDLVWFMMQK 1159

Query: 574  GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY----ACIVDLLGRVG 629
            G + D  T+  VL++C     +       +C     G+   +E      + +VD+  + G
Sbjct: 1160 GQRLDSFTFATVLSACASVATLERGMEVHAC-----GIRACMESDVVVGSALVDMYSKCG 1214

Query: 630  LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVL 686
             ++ A    + MP+  + + W S++S    +G+ +  L L    +L+ QP +    +L
Sbjct: 1215 RIDYASRFFELMPL-RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLL 1271



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 256/533 (48%), Gaps = 33/533 (6%)

Query: 83   TFSSLVK----ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
            TF SL+     +C S +  E+ H   +K GF   ++L +  I  Y + G++ SA+  F +
Sbjct: 546  TFESLINRYQGSCCSEEAREL-HLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDE 604

Query: 139  CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-----VK 193
              + + V +  ++ GY  NG+ D++   F +M   G   N ++  + L A  +      K
Sbjct: 605  MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 664

Query: 194  EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC-GQKLDAVKMFDEITEPDVVSWSERIA 252
             G QIHG   K  + S V   + N ++++Y  C     DA  +FD I   + +SW+  I+
Sbjct: 665  LGVQIHGLISKTRYGSDVV--VCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIIS 722

Query: 253  AAC---DGVEAFGLFKDLRFN----DFQINEYTMINLLSSVGG--ERILRAGKQIQAFCY 303
                  D V A+ LF  ++       F+ NEYT  +L+++     +  L   +Q+ A   
Sbjct: 723  VYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVE 782

Query: 304  KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
            K GF++ + +G+AL+S + + G  +DA++IF+ +  ++ VS N ++ G  +      A  
Sbjct: 783  KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 842

Query: 364  MFCHMLEFSLIPNGYTMASILEAVSNSKSL----KQAMQVHSHIIKSGFLLDDSMISC-- 417
            +F  M +   I N  +   +L A S    L    ++  +VH+H+I++G  L+D+ ++   
Sbjct: 843  VFHEMKDLVGI-NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG--LNDNKVAIGN 899

Query: 418  -LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
             L+  Y K  A+ ++  V   + +K++V  N+L S L    C  +A E +  +  +    
Sbjct: 900  GLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMP 959

Query: 477  NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
            +  T    L +CA++  +  G+ IHC  LK   D D+ V +A++ +Y + G   +  + F
Sbjct: 960  SNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVF 1019

Query: 537  RKICRDSLAGWNAMMMGYAQ-HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
              +       WN+++   +       +    F +M + G     +T++ +L++
Sbjct: 1020 SLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSA 1072



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 166/335 (49%), Gaps = 18/335 (5%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  +L++   G       +++     K GF+  + + N LI++Y + G +  A+ +FD +
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS--KSLKQ 395
             ++ V+W  +I+GY++NG  ++A   F  M+    IPN Y   S L A   S     K 
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKRVLSEIDKKNAVHINALASVLV 454
            +Q+H  I K+ +  D  + + LI+ YG C ++ N+++ V   I  +N++  N++ SV  
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725

Query: 455 YASCHAEALELYRTI----WGSCREVNGSTF-SIVLKACAA----MTDLEQGKAIHCLAL 505
                  A +L+ ++     G   + N  TF S++  AC++    +  LEQ  A      
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLA---RVE 782

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+ + QD++V SA++  + + G  +DAK  F ++   ++   N +M+G  +       + 
Sbjct: 783 KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 842

Query: 566 LFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREAR 599
           +F++M    G+  D  +Y+ +L++     ++ E R
Sbjct: 843 VFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGR 875



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 12/282 (4%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           +L  +  T  S++     S   ++A ++H   IK GF+ +  + + LI  Y +   L  +
Sbjct: 539 TLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSA 598

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--A 489
           +++  E+  +N V    L S         EA   +R +  +    N   F   L+AC  +
Sbjct: 599 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 658

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWN 548
             +  + G  IH L  K RY  D+ V + +I MY  C  +  DA+  F +I   +   WN
Sbjct: 659 GPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWN 718

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSK----FGVKPDEITYLAVLTSCCHA---GLVREARTY 601
           +++  Y++ G      +LF+ M K    F  KP+E T+ +++T+ C +   GL       
Sbjct: 719 SIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLC--VLEQ 776

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           +    +  G +  L   + +V    R GL + AK   +QM +
Sbjct: 777 MLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGV 818


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 222/705 (31%), Positives = 377/705 (53%), Gaps = 34/705 (4%)

Query: 75  QGLRPDAFTFSSLVKACGSLQ-----ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           +G+ PD FT     ++CG L+         VH +  KLG     ++ +  +  Y + G +
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 130 VSAEMCFRDCLDLDN--VAYTAMVCGYVWNGEFDKSKEVFVE-MRSLGLELNEFSLTAVL 186
             AE  F    D     V++ A++     +G+  +  E+F + + ++G  ++E +L  VL
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 187 G--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
              A+    E G  +HG   K G+ +     + NA++++Y +CG+  DA + F E   P 
Sbjct: 178 PMCAALGWSETGRAVHGLAAKSGWDAPA--RVGNALVDMYAKCGELADAERAFPEA--PS 233

Query: 244 VVSWSERIAAACDGVEA---FGLFKDLRFND---FQINEYTMINLLSSVGGERILRAGKQ 297
           VVSW+  + A     EA   FGL +D++  +      +E T++++L +  G   L   ++
Sbjct: 234 VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRE 293

Query: 298 IQAFCYKVGFMEVV-SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           + AF  + G       + NAL++ YG+CG++  A  +F  +  K   SWN++I+ +++  
Sbjct: 294 LHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQN 353

Query: 357 FFNQALDMFCHMLEF-SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
               A+++F  M     L P+G+++ S+L A ++ K L      H  I+++G   D  + 
Sbjct: 354 T-AAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIR 412

Query: 416 SCLITTYGKCNALNESKRVL-SEIDKKNAVHINALASVLVYASCHAEALELYR---TIWG 471
           + L++ Y +C+      RVL   +++K  V   A+ S         E+L+L+R   ++ G
Sbjct: 413 ASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEG 472

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
            C  V  +T +++  AC+ ++ +  GK +HC ALKA    D F+ S++IDMY KCG +ED
Sbjct: 473 HCSSVISATSALM--ACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVED 530

Query: 532 AKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           A+  F ++  RD+   W AM+ GYA +G   E   L+ KM + G++PDE TYL +L +C 
Sbjct: 531 ARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACG 590

Query: 591 HAGLVREARTYLSCMSDLHGLIP-QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           HAG++ E   +   M + H  I  +LEHY+C++ +L R G    A   + +MP  PDA I
Sbjct: 591 HAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKI 650

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
             S+LSAC I+G  +LG     +LLEL+PD    YVL SN+YA +  W+D+ K+RK +++
Sbjct: 651 LSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRD 710

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             + KEPG SWI V G  + F AG++ H + +++      L E +
Sbjct: 711 AGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERI 755



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 22/258 (8%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQ 61
           +  +++NG   D ++  +L+S + + +      R LFD  + +  + + A+ISG ++   
Sbjct: 397 HGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGL 456

Query: 62  SGPALKLFDRLR-YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            G +L+LF  ++  +G      + +S + AC  L    +   +H   LK       +L S
Sbjct: 457 PGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSS 516

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLD-NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I+ Y+K G +  A   F      D  V++TAM+ GY  NG   ++ E++ +MR  G+E
Sbjct: 517 SLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGME 576

Query: 177 LNEFSLTAVL---GASFDVKEGEQI------HGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            +EF+   +L   G +  ++EG +       H   ++V      C      ++ +  R G
Sbjct: 577 PDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSC------VIGMLSRAG 630

Query: 228 QKLDAVKMFDEIT-EPDV 244
           +  DAV +  E+  EPD 
Sbjct: 631 RFADAVALMAEMPQEPDA 648


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 194/607 (31%), Positives = 320/607 (52%), Gaps = 69/607 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQ 273
           N+++++Y + G+  DA  +F ++ E D VSW+  +     A    +A   F D+      
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +++ + N+LSS         G+++ +F  K+G    V + N+++ MYGKCG    AR++
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 334 FDYLIFKDS-------------------------------VSWNSMIAGYSENGFFNQAL 362
           F+ +  +                                 VSWN++IAGY++NG  + AL
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMAL 280

Query: 363 DMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             F  ML  S + P+ +T+ S+L A +N + LK   Q+HS+I+++G      +++ LI+T
Sbjct: 281 KFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIST 340

Query: 422 YGKCNALNESKRVLSE--IDKKNAVHINAL----------------------ASVLVYAS 457
           Y K  ++  ++R++ +  +   N +   AL                        V+ + +
Sbjct: 341 YAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTA 400

Query: 458 C---------HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
                     + EA+EL+R++  S  E N  T + VL ACA++  L  GK IHC A+++ 
Sbjct: 401 MIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSL 460

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +Q + V +A+I +Y + G++  A+R F +IC R     W +M++  AQHG   +   LF
Sbjct: 461 QEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLF 520

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + GVKPD +TY+ V ++C HAG + + + Y   M + HG++P++ HYAC+VDLL R
Sbjct: 521 EEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLAR 580

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            GLL  A   I +MP+ PD  +W SLL+AC +  N DL  LA  KLL + PDN   Y  L
Sbjct: 581 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSAL 640

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+Y++ G WND  ++ K  K+K + KE G+SW HV    H F A D  H Q   I K+ 
Sbjct: 641 ANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKA 700

Query: 748 IKLYEHM 754
            +++E +
Sbjct: 701 AEMWEEI 707



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/615 (23%), Positives = 257/615 (41%), Gaps = 139/615 (22%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVC 104
           ++++Y A  +G+ R C    A +LFD + Y   R +AFT++SL                 
Sbjct: 65  NLLSYYAR-AGVGRGCFH-EARRLFDDIPYA--RRNAFTWNSL----------------- 103

Query: 105 LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
                          +  YAKSG +  A + F    + D V++T MV G    G F  + 
Sbjct: 104 ---------------LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAV 148

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVG------------FLS 209
           + F++M   GL  ++F LT VL +    +    G ++H F +K+G            ++ 
Sbjct: 149 KTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMY 208

Query: 210 GVCNHLN-----------------NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           G C                     NA+++LY   G+   A+ MF+ + E  +VSW+  IA
Sbjct: 209 GKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIA 268

Query: 253 A-ACDGVEAFGL---FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
               +G++   L    + L  +  + +E+T+ ++LS+    R+L+ GKQ+ ++  + G  
Sbjct: 269 GYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMP 328

Query: 309 EVVSIGNALISMYGKCGQVNDARSI---------------------------------FD 335
               I NALIS Y K G V  AR I                                 FD
Sbjct: 329 YSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFD 388

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +  +D ++W +MI GY +NG  ++A+++F  M+     PN +T+A++L A ++   L  
Sbjct: 389 VMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGY 448

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLV 454
             Q+H   I+S      S+ + +IT Y +  ++  ++RV  +I  +K  V   ++   L 
Sbjct: 449 GKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALA 508

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 +A+ L+  +     + +  T+  V  AC     +++GK         RY + + 
Sbjct: 509 QHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGK---------RYYEQML 559

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
            E  ++                       ++ +  M+   A+ G   E      +M    
Sbjct: 560 NEHGIV---------------------PEMSHYACMVDLLARAGLLTEAHEFIQRMP--- 595

Query: 575 VKPDEITYLAVLTSC 589
           V PD + + ++L +C
Sbjct: 596 VAPDTVVWGSLLAAC 610



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 215/493 (43%), Gaps = 74/493 (15%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           +L+S + K      A         RD +++  ++ GL R  +   A+K F  +  +GL P
Sbjct: 102 SLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAP 161

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
             F  ++++ +C + +   I   VH   +KLG SS V + +  +  Y K G+  +A   F
Sbjct: 162 SQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVF 221

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF--VEMRSL--------------------- 173
                    ++ AMV  Y   G  D +  +F  +E RS+                     
Sbjct: 222 ERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALK 281

Query: 174 ---------GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVG--FLSGVCNHLNN-- 217
                     +E +EF++T+VL A  +   +K G+Q+H + ++ G  + S + N L +  
Sbjct: 282 FFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTY 341

Query: 218 ---------------------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
                                      A++  YV+ G    A ++FD +   DV++W+  
Sbjct: 342 AKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAM 401

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF+ +  +  + N +T+  +LS+      L  GKQI     +   
Sbjct: 402 IVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ 461

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFC 366
            + VS+ NA+I++Y + G V  AR +FD + + K++V+W SMI   +++G   QA+ +F 
Sbjct: 462 EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFE 521

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSMISCLITTYGKC 425
            ML   + P+  T   +  A +++  + +  + +  ++ + G + + S  +C++    + 
Sbjct: 522 EMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARA 581

Query: 426 NALNESKRVLSEI 438
             L E+   +  +
Sbjct: 582 GLLTEAHEFIQRM 594



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 168/377 (44%), Gaps = 48/377 (12%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRP 79
           ++S +T       A     + + R I+++NA+I+G  +      ALK F R L    + P
Sbjct: 235 MVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEP 294

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D FT +S++ AC +L+  ++   +H   L+ G      +++  I  YAKSG + +A    
Sbjct: 295 DEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIM 354

Query: 137 -----------------------------RDCLDL----DNVAYTAMVCGYVWNGEFDKS 163
                                        R+  D+    D +A+TAM+ GY  NG+ D++
Sbjct: 355 DKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEA 414

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            E+F  M   G E N  +L AVL A   +     G+QIH   ++   L      ++NAI+
Sbjct: 415 MELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRS--LQEQSVSVSNAII 472

Query: 221 NLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINE 276
            +Y R G    A ++FD+I    + V+W+  I A      G +A  LF+++     + + 
Sbjct: 473 TVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDR 532

Query: 277 YTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
            T I + S+      +  GK+  +    + G +  +S    ++ +  + G + +A     
Sbjct: 533 VTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQ 592

Query: 336 YL-IFKDSVSWNSMIAG 351
            + +  D+V W S++A 
Sbjct: 593 RMPVAPDTVVWGSLLAA 609



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 9/249 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDR 71
           L+ I  T L+  + K  D ++A R +FD   NRD+I + A+I G  +  Q+  A++LF  
Sbjct: 362 LNVISFTALLEGYVKLGDTKQA-REVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRS 420

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +   G  P++ T ++++ AC SL      + +H   ++      V + +  I  YA+SG 
Sbjct: 421 MIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGS 480

Query: 129 IVSAEMCFRD-CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           +  A   F   C   + V +T+M+     +G  +++  +F EM  +G++ +  +   V  
Sbjct: 481 VPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEI-TEPDV 244
           A       ++   +  ++    G+   +++   +++L  R G   +A +    +   PD 
Sbjct: 541 ACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDT 600

Query: 245 VSWSERIAA 253
           V W   +AA
Sbjct: 601 VVWGSLLAA 609



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 14/163 (8%)

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           ++ F  ++++ MY K G + DA+  F ++       W  M++G  + G + +    F  M
Sbjct: 95  RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC------IVDL 624
              G+ P +     VL+SC       EAR        +H  + +L   +C      ++ +
Sbjct: 155 VGEGLAPSQFMLTNVLSSCA----ATEAR---GIGRKVHSFVIKLGLSSCVPVANSVLYM 207

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            G+ G  E A+   ++M +  ++  W +++S  T  G +DL L
Sbjct: 208 YGKCGDAETARAVFERMKVRSESS-WNAMVSLYTHQGRMDLAL 249


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 212/671 (31%), Positives = 357/671 (53%), Gaps = 13/671 (1%)

Query: 94  LQENEIVHGVCLKLGF--SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           L++ + +HG  +K      S   +++  +  Y+K  +  SA   F +       ++T ++
Sbjct: 77  LKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLM 136

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFL 208
            G   NG +    + FVE+    +  +E++L+A + A   V     GE +H   +  GF 
Sbjct: 137 VGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFS 196

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFK 265
           S     +N +++ +Y + G+  D+ K+F+ +   + VSW+  I+    +G+  EA+  F 
Sbjct: 197 SR--TFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFL 254

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +   + + N    I++  ++G    +  G+ I    +++G    + +G ALI M+ KCG
Sbjct: 255 RMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCG 314

Query: 326 QVNDARSIF--DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
            V ++ S+F  ++     ++ WN+MI+G++ +G   +A+ +F  M + ++  + YT  S 
Sbjct: 315 CVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCST 374

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L ++++ +SL+   Q+H  I KSG +   S+ + L+  Y KC  L+  +++    ++ N 
Sbjct: 375 LNSIADMRSLEYVKQLHGMIWKSGSI-GVSLCNALMDAYAKCGELDAMRKLFDTWEESNQ 433

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           +    L +    +S   +AL ++  +     + N  TFS VL +CA++  LE G+ +H L
Sbjct: 434 ISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSL 493

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
             K  + +D  VES +IDMY KCG++ DA + F  +    +  W AM+ GYAQHG   + 
Sbjct: 494 TCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDA 553

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
             LF KM      P+  T+L +L +C H GLV E   Y   M + +GL+P++EHYAC+VD
Sbjct: 554 LELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVD 613

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           +LGRVG L  A   I +MPI PD  +W +LL AC ++GNI L  +A  K+L   PD+ + 
Sbjct: 614 ILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAA 673

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
            VLLSN Y  AG       +R  MK + + KE G SWI +GG  H F +GD  H Q  +I
Sbjct: 674 LVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDI 733

Query: 744 YKELIKLYEHM 754
           YK L  L E +
Sbjct: 734 YKTLNVLMEKV 744



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 278/588 (47%), Gaps = 22/588 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++   L+  ++K +DF  A +   +   + + ++  L+ G          +  F  +   
Sbjct: 99  VMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGC 158

Query: 76  GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            + PD +  S+ ++AC    S+   E+VH   +  GFSSR ++ +  +  YAK G I  +
Sbjct: 159 DIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDS 218

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE-----FSLTAVLG 187
              F    + + V++ AM+ G+V NG + ++   F+ M  LG E+        S++  +G
Sbjct: 219 CKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRM--LGEEIRPNVACFISVSKAIG 276

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF-DEITEPDV-V 245
              DV++G  I+    ++G  S +  H+  A+++++ +CG   ++  +F    +   V +
Sbjct: 277 QLGDVEKGRYINRIAFEIGMQSNI--HVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNL 334

Query: 246 SWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
            W+  I+    +  G EA  LF  +  N+ + + YT  + L+S+   R L   KQ+    
Sbjct: 335 PWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMI 394

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
           +K G +  VS+ NAL+  Y KCG+++  R +FD     + +SW +++  YS++  +  AL
Sbjct: 395 WKSGSIG-VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDAL 453

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  M E    PN  T + +L + ++  SL+   QVHS   K+GF  D  + S LI  Y
Sbjct: 454 SVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMY 513

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC ++ ++ +V   +   + +   A+ S         +ALEL+R +       N +TF 
Sbjct: 514 AKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFL 573

Query: 483 IVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-C 540
            +L AC+    +++G +  H +  +     +I   + V+D+  + G + +A +   K+  
Sbjct: 574 CLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPI 633

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
                 W+ ++     HG          K+  +   PD+   L +L++
Sbjct: 634 EPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSY--NPDDFAALVLLSN 679



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 223/448 (49%), Gaps = 19/448 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ +I  G      ++T+L+  + K      + +     +NR+ +++NA+ISG      
Sbjct: 186 VHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGL 245

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              A   F R+  + +RP+   F S+ KA G L   ++   ++ +  ++G  S +++ + 
Sbjct: 246 YAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTA 305

Query: 119 FIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            I+ +AK G +  +   F         N+ + AM+ G+  +G  +++  +F+ M    ++
Sbjct: 306 LIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIK 365

Query: 177 LNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + ++  + L +  D++  E   Q+HG   K G + GV   L NA+M+ Y +CG+ LDA+
Sbjct: 366 RDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSI-GV--SLCNALMDAYAKCGE-LDAM 421

Query: 234 -KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD   E + +SW+  + A     E   A  +F  +R   FQ N+ T   +L+S    
Sbjct: 422 RKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASL 481

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+Q+ +   K GF     + + LI MY KCG V DA  +F+ L   D +SW +MI
Sbjct: 482 CSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMI 541

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS--G 407
           +GY+++G    AL++F  M      PN  T   +L A S+   + + ++ + H+++   G
Sbjct: 542 SGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLR-YFHLMEERYG 600

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVL 435
            + +    +C++   G+   L E+ + +
Sbjct: 601 LVPEIEHYACVVDILGRVGRLTEAWKFI 628



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 137/298 (45%), Gaps = 9/298 (3%)

Query: 378 YTMASILEAVSNS---KSLKQAMQVHSHIIKSGFLLDDS---MISCLITTYGKCNALNES 431
           Y+  S++E +  S   + LK+A  +H  +IK   L++ S   M++ L+  Y KC+    +
Sbjct: 59  YSETSLIELIRESADERCLKKAKSIHGFVIKFQ-LIEKSLTVMLNQLVIAYSKCSDFGSA 117

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           ++V  EI +K+      L         + + ++ +  I G     +    S  ++AC  +
Sbjct: 118 RQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGV 177

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             +  G+ +H   +   +    FV ++++ MY K G I D+ + F  +   +   WNAM+
Sbjct: 178 DSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMI 237

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G+  +G Y E  N F +M    ++P+   +++V  +    G V + R Y++ ++   G+
Sbjct: 238 SGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGR-YINRIAFEIGM 296

Query: 612 IPQLEHYACIVDLLGRVG-LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
              +     ++D+  + G + E   + +           W +++S  TI G+ +  +L
Sbjct: 297 QSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAML 354



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 126/262 (48%), Gaps = 13/262 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++ ++ K+G  +   L   L+  + K  +   A R LFDT +  + I++  L++  ++ 
Sbjct: 389 QLHGMIWKSGS-IGVSLCNALMDAYAKCGELD-AMRKLFDTWEESNQISWTTLVTAYSQS 446

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
            +   AL +F ++R  G +P+  TFS ++ +C SL   +  + VH +  K GF+    + 
Sbjct: 447 SEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVE 506

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I+ YAK G +  A   F    D D +++TAM+ GY  +G    + E+F +M  +   
Sbjct: 507 SVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPN 566

Query: 177 LNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            N  +   +L A      V EG    H    + G +  + ++    ++++  R G+  +A
Sbjct: 567 PNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYA--CVVDILGRVGRLTEA 624

Query: 233 VKMFDEIT-EPDVVSWSERIAA 253
            K   ++  EPD   WS  + A
Sbjct: 625 WKFIMKMPIEPDEKVWSTLLGA 646


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 209/619 (33%), Positives = 337/619 (54%), Gaps = 16/619 (2%)

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVG 206
           M+ GY  +   D +   F  M+   +    ++ T +L   G + D+K G++IHG  +  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGLFK 265
           F   +       ++N+Y +C Q  DA  MFD + E D+V W+  I+  A +G     L  
Sbjct: 61  FSWNL--FAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALML 118

Query: 266 DLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
            LR ++   + +  T++++L +V   R+LR G  +  +  + GF  +V++  AL+ MY K
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           CG V+ AR IFD +  +  VSWNSMI GY ++G    A+ +F  ML+  + P   T+   
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L A ++   L++   VH  + +     D S+++ LI+ Y KC  ++ +  +   +  K  
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 444 VHINALASVLVYAS--CHAEALELYRTIWGSCREVNGSTFSI--VLKACAAMTDLEQGKA 499
           V  NA+  +L YA   C  EAL  +  +    R +   +F++  V+ A A ++   Q K 
Sbjct: 299 VSWNAM--ILGYAQNGCVNEALNAFCEM--QSRNIKPDSFTMVSVIPALAELSIPRQAKW 354

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH L ++   D+++FV +A++DMY KCG I  A++ F  +    +  WNAM+ GY  HG 
Sbjct: 355 IHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGL 414

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
                 LF +M K  +KP++IT+L  L++C H+GLV E   +   M   +G+ P ++HY 
Sbjct: 415 GKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYG 474

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
            +VDLLGR G L  A   I +MPI P   ++ ++L AC I+ N+DLG  A  ++ +L PD
Sbjct: 475 AMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPD 534

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
           +   +VLL+N+YA+A MW  V K+R  M++  L K PG S + +G   H FY+G +SH Q
Sbjct: 535 DGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQ 594

Query: 740 SKEIYKELIKLYEHMVATA 758
           SK+IY  L  L + + A  
Sbjct: 595 SKKIYSYLETLVDEIRAAG 613



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 229/455 (50%), Gaps = 11/455 (2%)

Query: 52  LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLG 108
           ++ G A+      AL  F R+++  +RP  + F+ L+K CG    L+  + +HG  +  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
           FS  ++ ++G +  YAK  +I  A   F    + D V +  M+ GY  NG    +  + +
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 169 EMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
            M   G   +  ++ ++L A  D   ++ G  +HG+ ++ GF S V  +++ A++++Y +
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLV--NVSTALVDMYSK 178

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFG---LFKDLRFNDFQINEYTMINL 282
           CG    A  +FD +    VVSW+  I       +A G   +F+ +     Q    T++  
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +      L  GK +     ++     VS+ N+LISMY KC +V+ A  IF  L  K  
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN+MI GY++NG  N+AL+ FC M   ++ P+ +TM S++ A++     +QA  +H  
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           +I+     +  +++ L+  Y KC A++ ++++   ++ ++ +  NA+            +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +EL++ +     + N  TF   L AC+    +E+G
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEG 453



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 224/457 (49%), Gaps = 14/457 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  +I +G   +    T +++ + K      A+        RD++ +N +ISG A+  
Sbjct: 51  EIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNG 110

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +  AL L  R+  +G RPD+ T  S++ A      L+    VHG  L+ GF S V + +
Sbjct: 111 FAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVST 170

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G +  A + F        V++ +M+ GYV +G+ + +  +F +M   G++ 
Sbjct: 171 ALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQP 230

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
              ++   L A     D++ G+ +H    ++   S V   + N+++++Y +C +   A  
Sbjct: 231 TNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVS--VMNSLISMYSKCKRVDIAAD 288

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +    +VSW+  I   A +G   EA   F +++  + + + +TM++++ ++    I
Sbjct: 289 IFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSI 348

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            R  K I     +    + V +  AL+ MY KCG ++ AR +FD +  +  ++WN+MI G
Sbjct: 349 PRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG 408

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    ++++F  M + ++ PN  T    L A S+S  +++ +      +K  + ++
Sbjct: 409 YGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFES-MKKDYGIE 467

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +M     ++   G+   LN++   + ++  K  + +
Sbjct: 468 PTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITV 504


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 205/584 (35%), Positives = 315/584 (53%), Gaps = 51/584 (8%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQ 273
           NA++++  + G+  +A  +F  + EPD  SW+  ++  A  D  E A   F D+   DF 
Sbjct: 89  NAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFV 148

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +NEY+  + LS+  G   L  G QI A   K  ++  V +G+AL+ MY KCG V  A+  
Sbjct: 149 LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRA 208

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  ++ VSWNS+I  Y +NG   +AL++F  M++  + P+  T+AS++ A ++  ++
Sbjct: 209 FDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAI 268

Query: 394 KQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVL----------------- 435
           ++ +Q+H+ ++K     +D ++ + L+  Y KC  +NE++ V                  
Sbjct: 269 REGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCG 328

Query: 436 --------------SEIDKKNAVHINALASVLVYASCHAEALELY-----RTIWGSCREV 476
                         S + +KN V  NAL +       + EA+ L+      +IW +    
Sbjct: 329 YARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT---- 384

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARY------DQDIFVESAVIDMYCKCGTIE 530
              TF  +L ACA + DL+ G+  H   LK  +      + DIFV +++IDMY KCG +E
Sbjct: 385 -HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVE 443

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           D    F ++    +  WNAM++GYAQ+G       +F KM   G KPD +T + VL++C 
Sbjct: 444 DGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACS 503

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGLV E R Y   M    GL P  +H+ C+VDLLGR G L+ A   I  MP+ PD  +W
Sbjct: 504 HAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVW 563

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            SLL+AC ++GNI+LG     KL+E+ P N   YVLLSN+YA  G W DV ++RK+M+++
Sbjct: 564 GSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQR 623

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + K+PG SWI +    H F   D  H   K+I+  L  L E M
Sbjct: 624 GVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQM 667



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 228/489 (46%), Gaps = 52/489 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
             ++S  TKF     AF         D  ++NA++SG A+  +   AL+ F  +  +   
Sbjct: 89  NAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFV 148

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + ++F S + AC  L +  +   +H +  K  +   VY+ S  ++ Y+K G +  A+  
Sbjct: 149 LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRA 208

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
           F      + V++ +++  Y  NG   K+ EVFV M   G+E +E +L +V+ A      +
Sbjct: 209 FDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAI 268

Query: 193 KEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQ----------------------- 228
           +EG QIH   VK   + + +   L NA++++Y +C +                       
Sbjct: 269 REGLQIHARVVKRDKYRNDLV--LGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMV 326

Query: 229 ----KLDAVK----MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEY 277
               +  +VK    MF  + E +VVSW+  IA      +  EA  LF  L+        Y
Sbjct: 327 CGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHY 386

Query: 278 TMINLLSSVGGERILRAGKQI------QAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           T  NLL++      L+ G+Q         F ++ G    + +GN+LI MY KCG V D  
Sbjct: 387 TFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGC 446

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ ++ +D VSWN+MI GY++NG+   AL++F  ML     P+  TM  +L A S++ 
Sbjct: 447 LVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAG 506

Query: 392 SLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS--EIDKKNAVHINA 448
            +++  +  HS   + G        +C++   G+   L+E+  ++    +   N V  + 
Sbjct: 507 LVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSL 566

Query: 449 LASVLVYAS 457
           LA+  V+ +
Sbjct: 567 LAACKVHGN 575



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 253/591 (42%), Gaps = 119/591 (20%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D+  F+ L+ +C    S  +   +H   +K  FSS +++ +  ++ Y K G    A   F
Sbjct: 18  DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77

Query: 137 -------------------------------RDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
                                          +   + D  ++ AMV G+  +  F+++  
Sbjct: 78  DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137

Query: 166 VFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            FV+M S    LNE+S  + L A     D+  G QIH    K  +L  V  ++ +A++++
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDV--YMGSALVDM 195

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWS------ERIAAACDGVEAFGLFKDLRFNDFQINE 276
           Y +CG    A + FD +   ++VSW+      E+   A   +E F +  D   N  + +E
Sbjct: 196 YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMD---NGVEPDE 252

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFD 335
            T+ +++S+      +R G QI A   K   +   + +GNAL+ MY KC +VN+AR +FD
Sbjct: 253 ITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312

Query: 336 YLIF-------------------------------KDSVSWNSMIAGYSENGFFNQALDM 364
            +                                 K+ VSWN++IAGY++NG   +A+ +
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRL 372

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL---DDSMI---SCL 418
           F  +   S+ P  YT  ++L A +N   LK   Q H+ I+K GF     ++S I   + L
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSL 432

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y KC  + +   V   + +++ V  NA+            ALE++R +  S ++ + 
Sbjct: 433 IDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDH 492

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   VL AC+    +E+G+         RY   +  E  +  M          K  F  
Sbjct: 493 VTMIGVLSACSHAGLVEEGR---------RYFHSMRTELGLAPM----------KDHF-- 531

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            C   L G         + GC  E ++L   M    ++PD + + ++L +C
Sbjct: 532 TCMVDLLG---------RAGCLDEANDLIQTMP---MQPDNVVWGSLLAAC 570



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 125/252 (49%), Gaps = 16/252 (6%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           +  T+++  + + A  + A     +   ++++++NALI+G  +  ++  A++LF  L+ +
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379

Query: 76  GLRPDAFTFSSLVKACGSLQENEI---------VHGVCLKLGFSSRVYLVSGFIENYAKS 126
            + P  +TF +L+ AC +L + ++          HG   + G  S +++ +  I+ Y K 
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKC 439

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G +    + F   ++ D V++ AM+ GY  NG    + E+F +M   G + +  ++  VL
Sbjct: 440 GMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVL 499

Query: 187 GASFD---VKEGEQ-IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-E 241
            A      V+EG +  H    ++G L+ + +H    +++L  R G   +A  +   +  +
Sbjct: 500 SACSHAGLVEEGRRYFHSMRTELG-LAPMKDHF-TCMVDLLGRAGCLDEANDLIQTMPMQ 557

Query: 242 PDVVSWSERIAA 253
           PD V W   +AA
Sbjct: 558 PDNVVWGSLLAA 569



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 45/217 (20%)

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           ++ S F+ +L +C         + IH   +K ++  +IF+++ ++D Y KCG  EDA++ 
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 536 FRKIC-RDSLA------------------------------GWNAMMMGYAQHGCYHEVS 564
           F ++  R++ +                               WNAM+ G+AQH  + E  
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ----LEHY-- 618
             F  M       +E ++ + L++C  AGL     T L+    +H LI +    L+ Y  
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSAC--AGL-----TDLNMGIQIHALISKSRYLLDVYMG 189

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           + +VD+  + G++  A+   D M +  +   W SL++
Sbjct: 190 SALVDMYSKCGVVACAQRAFDGMAV-RNIVSWNSLIT 225


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 212/667 (31%), Positives = 352/667 (52%), Gaps = 13/667 (1%)

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAK--SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
           + H    K G  S +Y+ +  +  Y+K  SG++  A   F +    D V +  M+ GYV 
Sbjct: 20  LTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVE 79

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL-GASFDVKE--GEQIHGFGVKVGFLSGVCN 213
           +G    + E    M+  G + + ++  ++L G +   +   G+Q+H   VK+G+   V  
Sbjct: 80  SGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSV-- 137

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFN 270
           +  +A++++Y +C +  DA  +F  +   + VSW+  I       D   AF L   ++  
Sbjct: 138 YAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKE 197

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
             ++ + T   LL+ + G++  +   Q+     K G     ++ NA ++ Y +CG + DA
Sbjct: 198 GVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDA 257

Query: 331 RSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           + +FD  +  +D V+WNSM+  Y  +     A ++F  M  F   P+ YT   ++ A   
Sbjct: 258 KRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFA 317

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKRVLSEIDKKNAVHIN 447
           +         H+ +IK G     ++ + LIT Y K N  ++  +  +   +  K+ V  N
Sbjct: 318 AAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWN 377

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           ++ +         +AL+L+  +  S  E++   +S VL++C+ +  L+ G+ IH L +K 
Sbjct: 378 SILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKT 437

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +D + FV S++I MY KCG IEDA + F    ++S   WN++M  YAQHG      +LF
Sbjct: 438 GFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLF 497

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           + M +  VK D +T++AVLT+C H GLV + R  L  M   +G+ P++EHYAC VDL GR
Sbjct: 498 SIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGR 557

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G LE AK  ID MP  P+A + ++LL AC   GNI+L     S+LLE++P+   TYV+L
Sbjct: 558 AGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVIL 617

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+Y     W+D   + + M+E+ + K PG+SWI V    H F A D SH  S+++Y+ L
Sbjct: 618 SNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQIL 677

Query: 748 IKLYEHM 754
            +L E M
Sbjct: 678 GELMEEM 684



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 261/525 (49%), Gaps = 29/525 (5%)

Query: 29  ADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLV 88
            D   A +   +  ++D +T+N +I+G       G A +    ++ +G + D +TF S++
Sbjct: 50  GDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSIL 109

Query: 89  KACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           K       +++   VH + +K+G+   VY  S  ++ YAK   +  A   F+     + V
Sbjct: 110 KGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFV 169

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL----GASFDVKEGEQIHGF 201
           ++ A++ G+V  G+ D +  +   M+  G+ + + +   +L    G  F  K   Q+H  
Sbjct: 170 SWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKF-YKLTMQLHCK 228

Query: 202 GVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-EITEPDVVSWSERIAAAC--- 255
            +K G  F + +C    NA +  Y  CG   DA ++FD  +   D+V+W+  + A     
Sbjct: 229 IIKHGLEFYNALC----NATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHD 284

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              +AF LF +++   F+ + YT   ++S+         GK   A   K G  E V+I N
Sbjct: 285 KDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICN 344

Query: 316 ALISMYGKCGQ--VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           ALI+MY K     +  A ++F  +  KD VSWNS++ G+S+ GF   AL +F HM     
Sbjct: 345 ALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLE 404

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             + Y  +++L + S+   L+   Q+H   +K+GF  +D + S LI  Y KC  + ++ +
Sbjct: 405 EIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWK 464

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAA 490
              +  K++++  N++  +  YA  H +   AL+L+  +     +++  TF  VL AC+ 
Sbjct: 465 CFEDTTKESSITWNSI--MFAYAQ-HGQGDVALDLFSIMREREVKLDHVTFVAVLTACSH 521

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
           +  +EQG+ +   ++++ Y     +E  +  +D++ + G +E+AK
Sbjct: 522 VGLVEQGRCV-LKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAK 565



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 219/464 (47%), Gaps = 18/464 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL++K G+       + L+  + K      A+        R+ +++NALI G  +  
Sbjct: 123 QVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVG 182

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A  L D ++ +G+R +  TF+ L+      +  ++   +H   +K G      L +
Sbjct: 183 DRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCN 242

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             +  Y++ G +  A+  F   +   D V + +M+  Y+ + + + +  +F+EM+  G E
Sbjct: 243 ATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFE 302

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL--D 231
            + ++ T V+ A F       G+  H   +K G    V   + NA++ +Y++   K    
Sbjct: 303 PDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVT--ICNALITMYLKLNNKSMEA 360

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F  +   D VSW+  +          +A  LF  +R +  +I++Y    +L S   
Sbjct: 361 ALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSD 420

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             IL+ G+QI     K GF     + ++LI MY KCG + DA   F+    + S++WNS+
Sbjct: 421 LAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSI 480

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  Y+++G  + ALD+F  M E  +  +  T  ++L A S+   ++Q   V    ++S +
Sbjct: 481 MFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKS-MESDY 539

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEID-KKNAVHINAL 449
            +   M   +C +  +G+   L E+K ++  +  + NA+ +  L
Sbjct: 540 GIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTL 583


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 199/631 (31%), Positives = 337/631 (53%), Gaps = 9/631 (1%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELN 178
           ++   K G++  +   F      D +++T ++ GYV   +  ++  +F  M    GL+ +
Sbjct: 97  LKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRD 156

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F ++  L   G   ++  GE +HGF VK G ++ V   +++A++++Y++ G+     ++
Sbjct: 157 QFMISVALKACGLGVNICFGELLHGFSVKSGLINSV--FVSSALIDMYMKVGKIEQGCRV 214

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F ++T+ +VVSW+  IA    A   +EA   F ++  +    + +T    L +     +L
Sbjct: 215 FKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLL 274

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK I     K GF E   + N L +MY KCG+ +    +F+ +   D VSW ++I  Y
Sbjct: 275 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTY 334

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G    A++ F  M + ++ PN YT A+++ A +N    K   Q+H H+++ G +   
Sbjct: 335 VQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDAL 394

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + ++T Y K   L  +  V   I +K+ +  + + +V        EA +    +   
Sbjct: 395 SVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRRE 454

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + N    S VL  C +M  LEQGK +H   L    D +  V SA+I MY KCG++E+A
Sbjct: 455 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEA 514

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F  +  +++  W AM+ GYA+HG   E  NLF K+S  G+KPD +T++ VLT+C HA
Sbjct: 515 SKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHA 574

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G+V     Y   M++ + + P  EHY CI+DLL R G L  A+  I  MP   D  +W +
Sbjct: 575 GMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWST 634

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL +C ++G++D G     +LL L P++  T++ L+N+YA+ G W +   +RK MK K +
Sbjct: 635 LLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGV 694

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
            KE G+SW++V    + F AGD +H QS+ I
Sbjct: 695 IKERGWSWVNVNDKLNAFVAGDQAHPQSEHI 725



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 262/539 (48%), Gaps = 21/539 (3%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACG- 92
           R++FD   +RD I++  LI+G      S  AL LF  +  Q GL+ D F  S  +KACG 
Sbjct: 110 RYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGL 169

Query: 93  --SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
             ++   E++HG  +K G  + V++ S  I+ Y K G+I      F+     + V++TA+
Sbjct: 170 GVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAI 229

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           + G V  G   ++   F EM    +  +  +    L AS D   +  G+ IH   +K GF
Sbjct: 230 IAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGF 289

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLF 264
                + + N +  +Y +CG+    +++F+++  PDVVSW+  I       E   A   F
Sbjct: 290 --DESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAF 347

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           K +R ++   N+YT   ++S+     I + G+QI     ++G ++ +S+ N+++++Y K 
Sbjct: 348 KRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKS 407

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G +  A  +F  +  KD +SW+++IA YS+ G+  +A D    M      PN + ++S+L
Sbjct: 408 GLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 467

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               +   L+Q  QVH+H++  G   +  + S LI+ Y KC ++ E+ ++ + +   N +
Sbjct: 468 SVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNII 527

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHC 502
              A+ +         EA+ L+  I     + +  TF  VL AC  A M DL      + 
Sbjct: 528 SWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDL---GFYYF 584

Query: 503 LALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           + +   Y      E    +ID+ C+ G + +A+   R + C      W+ ++     HG
Sbjct: 585 MLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHG 643



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 195/398 (48%), Gaps = 11/398 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +K+G      +S+ LI  + K     +  R       R+++++ A+I+GL     
Sbjct: 179 LHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGY 238

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           +  AL  F  +    +  D+ TF+  +KA      L   + +H   +K GF    ++++ 
Sbjct: 239 NMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 298

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y K G+       F      D V++T ++  YV  GE + + E F  MR   +  N
Sbjct: 299 LATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPN 358

Query: 179 EFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +++  AV+ A  ++   K GEQIHG  +++G +  +   + N+I+ LY + G    A  +
Sbjct: 359 KYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS--VANSIVTLYSKSGLLKSASLV 416

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  IT  D++SWS  IA    G    EAF     +R    + NE+ + ++LS  G   +L
Sbjct: 417 FHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALL 476

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GKQ+ A    +G      + +ALISMY KCG V +A  IF+ +   + +SW +MI GY
Sbjct: 477 EQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGY 536

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           +E+G+  +A+++F  +    L P+  T   +L A S++
Sbjct: 537 AEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHA 574



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 201/435 (46%), Gaps = 13/435 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND-F 272
           N+ +   V+ GQ   +  MFD++T  D +SW+  IA    A D  EA  LF ++      
Sbjct: 94  NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           Q +++ +   L + G    +  G+ +  F  K G +  V + +ALI MY K G++     
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  +  ++ VSW ++IAG    G+  +AL  F  M    +  + +T A  L+A ++S  
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSL 273

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L     +H+  IK GF     +I+ L T Y KC   +   R+  ++   + V    L + 
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITT 333

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V       A+E ++ +  S    N  TF+ V+ ACA +   + G+ IH   L+      
Sbjct: 334 YVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDA 393

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V ++++ +Y K G ++ A   F  I R  +  W+ ++  Y+Q G   E  +  + M +
Sbjct: 394 LSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRR 453

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH----YACIVDLLGRV 628
            G KP+E    +VL+ C    L+ + +   +     H L   ++H    ++ ++ +  + 
Sbjct: 454 EGPKPNEFALSSVLSVCGSMALLEQGKQVHA-----HVLCIGIDHEAMVHSALISMYSKC 508

Query: 629 GLLEGAKMTIDQMPI 643
           G +E A    + M I
Sbjct: 509 GSVEEASKIFNGMKI 523



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 30/249 (12%)

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS  G   +  ++     +  L  N Y++ ++LE  S  K L +  Q    + KS ++ D
Sbjct: 59  YSSPGTATECRELIQQAKQEQLAQNAYSVHNMLELNSELKQLVKQGQ----LCKSRYMFD 114

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW- 470
                                    ++  ++ +    L +  V AS   EAL L+  +W 
Sbjct: 115 -------------------------KMTHRDEISWTTLIAGYVNASDSYEALILFSNMWV 149

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
               + +    S+ LKAC    ++  G+ +H  ++K+     +FV SA+IDMY K G IE
Sbjct: 150 QPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIE 209

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
              R F+K+ + ++  W A++ G    G   E    F++M    V  D  T+   L +  
Sbjct: 210 QGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASA 269

Query: 591 HAGLVREAR 599
            + L+   +
Sbjct: 270 DSSLLHHGK 278



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 23/178 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++  G   + ++ + LIS ++K      A +     +  +II++ A+I+G A   
Sbjct: 481 QVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHG 540

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGF-----SSRVYL 115
            S  A+ LF+++   GL+PD  TF  ++ AC         H   + LGF      +  Y 
Sbjct: 541 YSQEAINLFEKISSVGLKPDYVTFIGVLTACS--------HAGMVDLGFYYFMLMTNEYQ 592

Query: 116 VSGFIENYA-------KSGEIVSAEMCFRD--CLDLDNVAYTAMVCGYVWNGEFDKSK 164
           +S   E+Y        ++G +  AE   R   C   D+V ++ ++     +G+ D+ +
Sbjct: 593 ISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYT-DDVVWSTLLRSCRVHGDVDRGR 649


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 218/754 (28%), Positives = 391/754 (51%), Gaps = 31/754 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + K+G   D  +ST ++  +  +     + +   +  +R+++++ +L+ G   + 
Sbjct: 195 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG---YS 251

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
             G   ++ D  + + L                      + G  +K G  S++ + +  I
Sbjct: 252 DKGEPEEVIDIYKDESL-------------------GRQIIGQVVKSGLESKLAVENSLI 292

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
                 G +  A   F    + D +++ ++   Y  NG  ++S  +F  MR    E+N  
Sbjct: 293 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 352

Query: 181 S---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +   L +VLG     K G  IHG  VK+GF S VC  + N ++ +Y   G+ ++A  +F 
Sbjct: 353 TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC--VCNTLLRMYAGAGRSVEANLVFK 410

Query: 238 EITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++   D++SW+  +A+   DG  ++A GL   +  +   +N  T  + L++         
Sbjct: 411 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 470

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+ +       G      IGNAL+SMYGK G+++++R +   +  +D V+WN++I GY+E
Sbjct: 471 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 530

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +   ++AL  F  M    +  N  T+ S+L A +     L++   +H++I+ +GF  D+ 
Sbjct: 531 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 590

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + LIT Y KC  L+ S+ + + +D +N +  NA+ +   +     E L+L   +    
Sbjct: 591 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 650

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
             ++  +FS  L A A +  LE+G+ +H LA+K  ++ D F+ +A  DMY KCG I +  
Sbjct: 651 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 710

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           +        SL  WN ++    +HG + EV   F++M + G+KP  +T++++LT+C H G
Sbjct: 711 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 770

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV +   Y   ++   GL P +EH  C++DLLGR G L  A+  I +MP+ P+  +W+SL
Sbjct: 771 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 830

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L++C I+GN+D G  A   L +L+P+++S YVL SN++A+ G W DV  +RK+M  K + 
Sbjct: 831 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 890

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           K+   SW+ +      F  GD +H Q+ EIY +L
Sbjct: 891 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 924



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 193/708 (27%), Positives = 331/708 (46%), Gaps = 67/708 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           +++L +K    L  + + TLI+ +TKF   + A R LFD    R+ +++N ++SG+ R  
Sbjct: 94  VHALCVKGLVRLSVLHTNTLINMYTKFGRVKPA-RHLFDIMPVRNEVSWNTMMSGIVRVG 152

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
                ++ F ++   G++P +F  +SLV ACG      +E   VHG   K G  S VY+ 
Sbjct: 153 LYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVS 212

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y   G +  +   F +  D + V++T+++ GY   GE ++  +++         
Sbjct: 213 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK-------- 264

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
                         D   G QI G  VK G  S +   + N+++++    G    A  +F
Sbjct: 265 --------------DESLGRQIIGQVVKSGLESKLA--VENSLISMLGSMGNVDYANYIF 308

Query: 237 DEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D+++E D +SW+   AA A +G   E+F +F  +R    ++N  T+  LLS +G     +
Sbjct: 309 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQK 368

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+ I     K+GF  VV + N L+ MY   G+  +A  +F  +  KD +SWNS++A + 
Sbjct: 369 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV 428

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +G    AL + C M+      N  T  S L A       ++   +H  ++ SG   +  
Sbjct: 429 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 488

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L++ YGK   ++ES+RVL ++ +++ V  NAL           +AL  ++T+    
Sbjct: 489 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 548

Query: 474 REVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
              N  T   VL AC    D LE+GK +H   + A ++ D  V++++I MY KCG +  +
Sbjct: 549 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 608

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +  F  +   ++  WNAM+   A HG   EV  L +KM  FGV  D+ ++   L++    
Sbjct: 609 QDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 668

Query: 593 GLVRE-----------------------ARTYLSC--MSDLHGLIP-----QLEHYACIV 622
            ++ E                       A  Y  C  + ++  ++P      L  +  ++
Sbjct: 669 AVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 728

Query: 623 DLLGRVGLLEGAKMTID---QMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             LGR G  E    T     +M I P    + SLL+AC+  G +D GL
Sbjct: 729 SALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 776



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/474 (21%), Positives = 207/474 (43%), Gaps = 53/474 (11%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE----- 249
           G  +H   VK G +     H  N ++N+Y + G+   A  +FD +   + VSW+      
Sbjct: 91  GRAVHALCVK-GLVRLSVLH-TNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGI 148

Query: 250 -RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE-RILRAGKQIQAFCYKVGF 307
            R+    +G+E F    DL     + + + + +L+++ G    + R G Q+  F  K G 
Sbjct: 149 VRVGLYLEGMEFFRKMCDL---GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 205

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  V +  A++ +YG  G V+ +R +F+ +  ++ VSW S++ GYS+ G   + +D++  
Sbjct: 206 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY-- 263

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
                                  K      Q+   ++KSG     ++ + LI+  G    
Sbjct: 264 -----------------------KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 300

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           ++ +  +  ++ +++ +  N++A+         E+  ++  +     EVN +T S +L  
Sbjct: 301 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 360

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
              +   + G+ IH L +K  +D  + V + ++ MY   G   +A   F+++    L  W
Sbjct: 361 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 420

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N++M  +   G   +   L   M   G   + +T+ + L +C       + R        
Sbjct: 421 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI------- 473

Query: 608 LHGLI-------PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           LHGL+        Q+   A +V + G++G +  ++  + QMP   D   W +L+
Sbjct: 474 LHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 525



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 40/373 (10%)

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           I   G+ + A C K      V   N LI+MY K G+V  AR +FD +  ++ VSWN+M++
Sbjct: 87  IETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMS 146

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL-KQAMQVHSHIIKSGFL 409
           G    G + + ++ F  M +  + P+ + +AS++ A   S S+ ++ +QVH  + KSG L
Sbjct: 147 GIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL 206

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + ++  YG    ++ S++V  E+  +N V   +L           E +++Y+  
Sbjct: 207 SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK-- 264

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                                  D   G+ I    +K+  +  + VE+++I M    G +
Sbjct: 265 -----------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV 301

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + A   F ++       WN++   YAQ+G   E   +F+ M +F  + +  T   +L+  
Sbjct: 302 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 361

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQL--EHYACIVDLLGRV----GLLEGAKMTIDQMPI 643
            H    +  R        +HGL+ ++  +   C+ + L R+    G    A +   QMP 
Sbjct: 362 GHVDHQKWGR-------GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 414

Query: 644 PPDAHIWQSLLSA 656
             D   W SL+++
Sbjct: 415 -KDLISWNSLMAS 426


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 236/781 (30%), Positives = 411/781 (52%), Gaps = 32/781 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFT----KFADFRRAFRFLFDTQNRDIITYNALISGL 56
           +I+ L+ K+ +  D +LS  L+S ++       D RR F    + + +   ++N++IS  
Sbjct: 163 EIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFE---EIKMKTSASWNSIISVY 219

Query: 57  ARFCQSGPALKLFDRLRYQGL----RPDAFTFSSLVKACGSLQEN-----EIVHGVCLKL 107
            R   +  A KLF  ++ +      RP+ +TF SLV    SL +      E +     K 
Sbjct: 220 CRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKS 279

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
            F   +Y+ S  +  +A+ G I SA+M F    D + V    ++ G     + +++ ++F
Sbjct: 280 SFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF 339

Query: 168 VEMRSLGLELNEFSLTAVLGASFDV-------KEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            EM+ L +E+N  S   +L A  +        ++G+++H + ++   L  V   + NA++
Sbjct: 340 KEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIR-NALVDVWILIGNALV 397

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEY 277
           NLY +C    +A  +F  +   D VSW+  I+         EA   F  +R N    +++
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           ++I+ LSS      +  G+QI     K G    VS+ NAL+++Y +   + + + +F  +
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLM 517

Query: 338 IFKDSVSWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
              D VSWNS I    +      QA+  F  M++    PN  T  +IL AVS+   L+  
Sbjct: 518 PEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELG 577

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVY 455
            Q+H+ I+K     D+++ + L+  YGKC  + + + + S + ++++ V  NA+ S  ++
Sbjct: 578 RQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIH 637

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                +A+ L   +    + ++  T + VL ACA++  LE+G  +H  A++A  + ++ V
Sbjct: 638 NGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVV 697

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            SA++DMY KCG I+ A R F  +   ++  WN+M+ GYA+HG   +   LF +M + G 
Sbjct: 698 GSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQ 757

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
            PD +T++ VL++C H GLV E   +   M +++ L P++EH++C+VDLLGR G ++  +
Sbjct: 758 LPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLE 817

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
             I  MP+ P+A IW+++L AC      N +LG  A   L+EL+P N   YVLLSN++A+
Sbjct: 818 EFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAA 877

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
            G W DV + R  M+   + KE G SW+ +    H F AGD +H + ++IY +L ++   
Sbjct: 878 GGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNK 937

Query: 754 M 754
           M
Sbjct: 938 M 938



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 166/688 (24%), Positives = 338/688 (49%), Gaps = 32/688 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + K G   D     TL++ F +  +   A +   +   +++++++ L+SG A+  
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
               A  LF  +   GL P+ +   S ++AC  L  N +     +HG+  K  ++S + L
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179

Query: 116 VSGFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  +  Y+  S  I  A   F +     + ++ +++  Y   G+   + ++F  M+   
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239

Query: 175 LEL----NEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
            EL    NE++  +++  +  + +      EQ+     K  F+  +  ++ +A+++ + R
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDL--YVGSALVSGFAR 297

Query: 226 CGQKLDAVKM-FDEITEPDVVSWSER---IAAACDGVEAFGLFKDLRFNDFQINEYTMIN 281
            G  +D+ KM F+++ + + V+ +     +A    G EA  +FK+++ +  +IN  +   
Sbjct: 298 YGL-IDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSYAV 355

Query: 282 LLSSVGGERIL----RAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDY 336
           LLS+      L    R G+++ A+  +   ++V + IGNAL+++Y KC  +++ARSIF  
Sbjct: 356 LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  KD+VSWNS+I+G   N  F +A+  F  M    ++P+ +++ S L + ++   +   
Sbjct: 416 MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLG 475

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q+H   IK G  LD S+ + L+T Y + + + E ++V   + + + V  N+    L  +
Sbjct: 476 QQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATS 535

Query: 457 SCHA-EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                +A++ +  +  +  + N  TF  +L A ++++ LE G+ IH L LK     D  +
Sbjct: 536 EASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAI 595

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           E+ ++  Y KC  +ED +  F ++  R     WNAM+ GY  +G  H+   L   M + G
Sbjct: 596 ENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKG 655

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
            + D+ T   VL++C     +       +C +    L  ++   + +VD+  + G ++ A
Sbjct: 656 QRLDDFTLATVLSACASVATLERGMEVHAC-AIRACLEAEVVVGSALVDMYAKCGKIDYA 714

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGN 662
               + MP+  + + W S++S    +G+
Sbjct: 715 SRFFELMPV-RNIYSWNSMISGYARHGH 741



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 264/521 (50%), Gaps = 38/521 (7%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           ++++   +H    K G +S V+  +  +  + ++G +VSA+  F +    + V+++ +V 
Sbjct: 54  TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-----VKEGEQIHGFGVKVGF 207
           GY  NG  D++  +F  + S GL  N +++ + L A  +     +K G +IHG   K  +
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173

Query: 208 LSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGL 263
            S +   L+N +M++Y  C   + DA ++F+EI      SW+  I+  C   D + AF L
Sbjct: 174 ASDMV--LSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKL 231

Query: 264 FKDLRFNDFQI----NEYTMINLLSSVGGERI---LRAGKQIQAFCYKVGFMEVVSIGNA 316
           F  ++    ++    NEYT  +L+ +V    +   L   +Q+ A   K  F++ + +G+A
Sbjct: 232 FSSMQREATELNCRPNEYTFCSLV-TVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L+S + + G ++ A+ IF+ +  +++V+ N ++ G +      +A  +F  M +   I N
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEI-N 349

Query: 377 GYTMASILEAVSNSKSLKQ----AMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNE 430
             + A +L A +   +LK+      +VH+++I++  L+D  ++  + L+  Y KCNA++ 
Sbjct: 350 ASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA-LVDVWILIGNALVNLYAKCNAIDN 408

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG---STFSIV--L 485
           ++ +   +  K+ V  N++ S L +     EA+  + T+       NG   S FS++  L
Sbjct: 409 ARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTM-----RRNGMVPSKFSVISTL 463

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +CA++  +  G+ IH   +K   D D+ V +A++ +Y +   +E+ ++ F  +      
Sbjct: 464 SSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQV 523

Query: 546 GWNAMMMGYA-QHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            WN+ +   A       +    F +M + G KP+ +T++ +
Sbjct: 524 SWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 26/270 (9%)

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           +S +++ A Q+H  I K+G   D    + L+  + +   L  ++++  E+ +KN V  + 
Sbjct: 51  DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD--LEQGKAIHCLALK 506
           L S         EA  L+R I  +    N       L+AC  +    L+ G  IH L  K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170

Query: 507 ARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           + Y  D+ + + ++ MY  C  +I+DA+R F +I   + A WN+++  Y + G       
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230

Query: 566 LFNKMSK----FGVKPDEITYLAVLTSCCHAGLVREARTYLSC-MSDLHGLIPQLEHYAC 620
           LF+ M +       +P+E T+ +++T  C         + + C ++ L  ++ ++E  + 
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVAC---------SLVDCGLTLLEQMLARIEKSSF 281

Query: 621 IVDL---------LGRVGLLEGAKMTIDQM 641
           + DL           R GL++ AKM  +QM
Sbjct: 282 VKDLYVGSALVSGFARYGLIDSAKMIFEQM 311


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 223/706 (31%), Positives = 385/706 (54%), Gaps = 30/706 (4%)

Query: 69  FDRLRYQGLRPDAFTFSSLVK------AC---GSLQENEIVHGVCLKLGFSSRVYLVSGF 119
           F+ LR    R D  T S L+K      AC   G+L+  +++H   +  G      L++  
Sbjct: 21  FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80

Query: 120 IENYAKSGEIVSAEMCFRDC--LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           I  Y+K G+  +A   FR+      D V+++A++  +  N    ++   F+ M      +
Sbjct: 81  ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNI 140

Query: 178 ---NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFL-SGVCNHLNNAIMNLYVRCGQKL 230
              NE+  TA+L +  +      G  I  F +K G+  S VC  +  A+++++ + G  +
Sbjct: 141 IYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVC--VGCALIDMFTKGGLDI 198

Query: 231 DAVKM-FDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            + +M FD++   ++V+W+  I      G+  +A  LF  L  +++  +++T+ +LLS+ 
Sbjct: 199 QSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSAC 258

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                   GKQ+ ++  + G    V +G  L+ MY K   V ++R IF+ ++  + +SW 
Sbjct: 259 VELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWT 318

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++I+GY ++    +A+ +FC+ML   + PN +T +S+L+A ++        Q+H   IK 
Sbjct: 319 ALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKL 378

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL--E 464
           G    + + + LI  Y +   +  +++  + + +KN +  N  A     A    E+   E
Sbjct: 379 GLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHE 438

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           +  T  G+    +  T++ +L   A +  + +G+ IH L +K+ +  ++ + +A+I MY 
Sbjct: 439 VEHTGVGA----SPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYS 494

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG  E A + F  +   ++  W +++ G+A+HG   +   LF +M + GVKP+E+TY+A
Sbjct: 495 KCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIA 554

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL++C H GL+ EA  + + M   H + P++EHYAC+VDLLGR GLL  A   I+ MP  
Sbjct: 555 VLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFD 614

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            DA +W++ L +C ++ N  LG  A  K+LE +P + +TY+LLSNLYAS G W+DV  LR
Sbjct: 615 ADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALR 674

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K MK+K L KE GYSWI V    H F+ GD+SH Q+++IY EL +L
Sbjct: 675 KSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDEL 720



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 248/486 (51%), Gaps = 37/486 (7%)

Query: 2   IYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           I++ L+K G+    + +   LI  FTK     ++ R +FD  Q+++++T+  +I+  ++ 
Sbjct: 167 IFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQL 226

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLV 116
                A+ LF RL      PD FT +SL+ AC  L+     + +H   ++ G +S V++ 
Sbjct: 227 GLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVG 286

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              ++ YAKS  + ++   F   L  + +++TA++ GYV + +  ++ ++F  M    + 
Sbjct: 287 CTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVT 346

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N F+ ++VL A   + +   G+Q+HG  +K+G      N + N+++N+Y R G    A 
Sbjct: 347 PNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGL--STINCVGNSLINMYARSGTMECAR 404

Query: 234 KMFDEITEPDVVSW---SERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K F+ + E +++S+   ++  A A D  E+F    ++       + +T   LLS      
Sbjct: 405 KAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIG 462

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  G+QI A   K GF   + I NALISMY KCG    A  +F+ + +++ ++W S+I+
Sbjct: 463 TIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIIS 522

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G++++GF  +AL++F  MLE  + PN  T  ++L A S+   + +A + H + +     +
Sbjct: 523 GFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWK-HFNSMHYNHSI 581

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              M   +C++   G+      S  +L  I+  N++  +A A V             +RT
Sbjct: 582 SPRMEHYACMVDLLGR------SGLLLEAIEFINSMPFDADALV-------------WRT 622

Query: 469 IWGSCR 474
             GSCR
Sbjct: 623 FLGSCR 628



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 179/362 (49%), Gaps = 17/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +I++G   D  +  TL+  + K A    + +      + +++++ ALISG  +  
Sbjct: 269 QLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSR 328

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           Q   A+KLF  + +  + P+ FTFSS++KAC SL +  I   +HG  +KLG S+   + +
Sbjct: 329 QEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGN 388

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV-EMRSLGLE 176
             I  YA+SG +  A   F    + + ++Y         N +   S E F  E+   G+ 
Sbjct: 389 SLINMYARSGTMECARKAFNILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVG 445

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+   +L  +     + +GEQIH   VK GF + +C  +NNA++++Y +CG K  A+
Sbjct: 446 ASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLC--INNALISMYSKCGNKEAAL 503

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+++   +V++W+  I+         +A  LF ++     + NE T I +LS+     
Sbjct: 504 QVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVG 563

Query: 291 IL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++  A K   +  Y       +     ++ + G+ G + +A    + + F  D++ W + 
Sbjct: 564 LIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTF 623

Query: 349 IA 350
           + 
Sbjct: 624 LG 625


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/606 (32%), Positives = 321/606 (52%), Gaps = 71/606 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFG----LFKDLRFNDF 272
           N++++LY + G+  DA  +F E+ E D VSW+  +    + V  FG    +F D+  +  
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVG-LNRVGRFGEAIKMFLDMVTDGL 158

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
              ++T+ N+LSS         G+++ +F  K+G    V + N++++MYGKCG    AR+
Sbjct: 159 SPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARA 218

Query: 333 IFDYL--------------------------IFKDS-----VSWNSMIAGYSENGFFNQA 361
           +F+ +                          +F++      VSWN++IAGY++NG   +A
Sbjct: 219 VFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKA 278

Query: 362 LDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           L  F  ML +S + P+ +T+ S+L A +N   +    QVH++I++S       + + LI+
Sbjct: 279 LWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALIS 338

Query: 421 TYGKCNALNESKRVLSEI---------------------DKKNAVHINALAS---VLVYA 456
            Y K  ++  ++ V+ +                      D K+A  +  + S   V+ + 
Sbjct: 339 MYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWT 398

Query: 457 SC---------HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           +          + EA+EL+R +  S  E N  T + VL  CA++  LE GK IHC A+++
Sbjct: 399 AMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             +Q   V ++++ MY + G++  A+R F ++  R     W +M++  AQHG   +   L
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGL 518

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F +M + GVKPD IT++ VL++C H G V E + Y   + D HG++P++ HYAC+VDLL 
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLA 578

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R GL   A+  I QMP+ PDA  W SLLSAC ++ N DL  LA  KLL + P N   Y  
Sbjct: 579 RAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSA 638

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           LSN+Y++ G WND  K+ K  K+K + KE G+SW H+G   H F A D  H Q   +Y+ 
Sbjct: 639 LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698

Query: 747 LIKLYE 752
             K+++
Sbjct: 699 AAKMWD 704



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 242/549 (44%), Gaps = 107/549 (19%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  +  YAKSG +  A   F +  + D V++T MV G    G F ++ ++F++M +
Sbjct: 96  VFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVT 155

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            GL   +F+LT VL +    +    G ++H F VK+G  S  C  + N+++N+Y +CG  
Sbjct: 156 DGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSS--CVPVANSVLNMYGKCGDA 213

Query: 230 LDAVKMFDEITE-----------------------------PD--VVSWSERIAA-ACDG 257
             A  +F+ + E                             PD  +VSW+  IA    +G
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273

Query: 258 VEAFGLF---KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           + A  L+   + L ++    +E+T+ ++LS+     ++  GKQ+ A+  +     +  + 
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333

Query: 315 NALISMYGKCGQVNDARSI---------------------------------FDYLIFKD 341
           NALISMY K G V +AR +                                 FD +  +D
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V+W +MI GY +NG  ++A+++F  M+     PN YT+A++L   ++   L+   Q+H 
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHC 453

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHA 460
             I+S      S+ + ++T Y +  +L  ++RV   +  +K  V   ++   L       
Sbjct: 454 KAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGE 513

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +A+ L+  +     + +  TF  VL AC  +  +++GK         RY Q +  +  ++
Sbjct: 514 DAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGK---------RYFQQLQDKHGIV 564

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
                                  ++ +  M+   A+ G + E      +M    V+PD I
Sbjct: 565 ---------------------PEMSHYACMVDLLARAGLFSEAQEFIQQMP---VEPDAI 600

Query: 581 TYLAVLTSC 589
            + ++L++C
Sbjct: 601 AWGSLLSAC 609



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 215/493 (43%), Gaps = 74/493 (15%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           +L+S + K      A     +   RD +++  ++ GL R  + G A+K+F  +   GL P
Sbjct: 101 SLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSP 160

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC- 135
             FT ++++ +C + +   +   VH   +KLG SS V + +  +  Y K G+  +A    
Sbjct: 161 TQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVF 220

Query: 136 ------------------------------FRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
                                         F +  D   V++ A++ GY  NG   K+  
Sbjct: 221 ERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALW 280

Query: 166 VFVEMRSLG-LELNEFSLTAVLGASFD---VKEGEQIHGFGV--KVGFLSGVCNHLNN-- 217
            F  M S   +  +EF++T+VL A  +   V  G+Q+H + +  ++ ++  V N L +  
Sbjct: 281 FFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMY 340

Query: 218 ---------------------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
                                      A++  YV+ G    A +MFD ++  DVV+W+  
Sbjct: 341 AKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAM 400

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF+ +  +  + N YT+  +LS       L  GKQI     +   
Sbjct: 401 IVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ 460

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFC 366
            +  S+ N++++MY + G +  AR +FD + + K++V+W SMI   +++G    A+ +F 
Sbjct: 461 EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFE 520

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSMISCLITTYGKC 425
            ML   + P+  T   +L A ++   + +  +    +  K G + + S  +C++    + 
Sbjct: 521 EMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARA 580

Query: 426 NALNESKRVLSEI 438
              +E++  + ++
Sbjct: 581 GLFSEAQEFIQQM 593



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 168/364 (46%), Gaps = 48/364 (13%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACG 92
           A     +  +R I+++NA+I+G  +   +  AL  F R L Y  + PD FT +S++ AC 
Sbjct: 247 ALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACA 306

Query: 93  SLQENEI---VHGVCL--KLGFSSRV-------YLVSGFIEN------------------ 122
           +L    I   VH   L  ++ +  +V       Y  SG +EN                  
Sbjct: 307 NLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISF 366

Query: 123 ------YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
                 Y K G++  A   F    + D VA+TAM+ GY  NG  D++ E+F  M   G E
Sbjct: 367 TALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPE 426

Query: 177 LNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N +++ AVL   AS    E G+QIH   ++   L    + ++N+I+ +Y R G    A 
Sbjct: 427 PNSYTVAAVLSVCASLACLEYGKQIHCKAIRS--LQEQSSSVSNSIVTMYARSGSLPWAR 484

Query: 234 KMFDEIT-EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           ++FD +    + V+W+  I A      G +A GLF+++     + +  T + +LS+    
Sbjct: 485 RVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHV 544

Query: 290 RILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNS 347
             +  GK+  Q    K G +  +S    ++ +  + G  ++A+     + +  D+++W S
Sbjct: 545 GFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGS 604

Query: 348 MIAG 351
           +++ 
Sbjct: 605 LLSA 608



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 119/249 (47%), Gaps = 9/249 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDR 71
           L+ I  T L+  + K  D + A R +FD   NRD++ + A+I G  +   +  A++LF  
Sbjct: 361 LNVISFTALLEGYVKLGDMKHA-REMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRL 419

Query: 72  LRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +   G  P+++T ++++  C S   L+  + +H   ++        + +  +  YA+SG 
Sbjct: 420 MIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGS 479

Query: 129 IVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           +  A   F R     + V +T+M+     +G  + +  +F EM  +G++ +  +   VL 
Sbjct: 480 LPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLS 539

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEI-TEPDV 244
           A   V   ++   +  ++    G+   +++   +++L  R G   +A +   ++  EPD 
Sbjct: 540 ACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDA 599

Query: 245 VSWSERIAA 253
           ++W   ++A
Sbjct: 600 IAWGSLLSA 608



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 18/175 (10%)

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           +++F  ++++ +Y K G + DA+  F ++       W  M++G  + G + E   +F  M
Sbjct: 94  RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC------IVDL 624
              G+ P + T   VL+SC       EAR        +H  + +L   +C      ++++
Sbjct: 154 VTDGLSPTQFTLTNVLSSCA----ATEAR---GVGRKVHSFVVKLGLSSCVPVANSVLNM 206

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
            G+ G  E A+   ++MP       W +++S     G +DL L     L E  PD
Sbjct: 207 YGKCGDAETARAVFERMP-ERSVSSWNAMVSLDAHLGRMDLAL----SLFENMPD 256


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 209/670 (31%), Positives = 346/670 (51%), Gaps = 13/670 (1%)

Query: 80   DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG--FIENYAKSGEIVSAEM 134
            D++ ++ L++ C   G  +    VHG  ++ G  +R+ L      +  Y K G   SA  
Sbjct: 427  DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486

Query: 135  CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFD 191
             F    + + V++  +V G+   GEF+++  +F  +R  G E+N+F LT VL    A   
Sbjct: 487  VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546

Query: 192  VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
            +     +H    K+G        + +A+++ Y  CG   DA ++FD I   D V+W+  +
Sbjct: 547  LGLAWGVHACACKLGHDRNA--FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMV 604

Query: 252  AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
            +   +         +F  +R    ++N + + ++L +      +  GK I A   K  + 
Sbjct: 605  SCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYD 664

Query: 309  EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
                +  AL+ MY KCG + DAR  F+ +   D + W+ MI+ Y++     QA ++F  M
Sbjct: 665  TERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM 724

Query: 369  LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            +  S+ PN ++++S+L+A +N   L    Q+H+H IK G   +  + + LI  Y KC+ +
Sbjct: 725  MRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDM 784

Query: 429  NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
              S  + S +   N V  N +      +     AL ++R +  +       T+S VL+AC
Sbjct: 785  ESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRAC 844

Query: 489  AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
            A+   +     +HCL  K+ ++ D  V +++ID Y KCG I DA+  F  +    L  WN
Sbjct: 845  ASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWN 904

Query: 549  AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            A++ GYA HG       LF+ MSK  +K ++IT++A+L+ C   GLV +  +    M   
Sbjct: 905  AIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLD 964

Query: 609  HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
            HG+ P +EHY CIV LLGR G L  A   I  +P  P A +W++LLS+C ++ N++LG  
Sbjct: 965  HGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRF 1024

Query: 669  AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
            +  K+LE++P +E+TYVLLSN+Y++AG  + V   RK M+   + KEPG SW+ + G  H
Sbjct: 1025 SAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVH 1084

Query: 729  HFYAGDSSHS 738
             F  G   H 
Sbjct: 1085 AFSVGSEDHP 1094



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 245/494 (49%), Gaps = 11/494 (2%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           LD   +  L++ +TK   F  A R       R+++++  L+ G A   +   A  LF RL
Sbjct: 463 LDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRL 522

Query: 73  RYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R++G   + F  ++++K   A  +L     VH    KLG     ++ S  I+ Y+  G +
Sbjct: 523 RWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVV 582

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
             A   F   +  D VA+TAMV  Y  N   + + ++F +MR    +LN F+LT+VL A+
Sbjct: 583 SDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAA 642

Query: 190 F---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                V  G+ IH   VK   L     H+  A++++Y +CG   DA   F+ +T  DV+ 
Sbjct: 643 VCLSSVVLGKGIHACSVKT--LYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVIL 700

Query: 247 WSERIA--AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  I+  A C+  E AF LF  +  +    NE+++ ++L +     +L  GKQI     
Sbjct: 701 WSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAI 760

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+G    + +GNALI +Y KC  +  +  IF  L   + VSWN++I GYS++GF   AL 
Sbjct: 761 KIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALS 820

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M   S+     T +S+L A +++ S+    QVH  I KS F  D  + + LI +Y 
Sbjct: 821 VFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYA 880

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  + +++ +   + + + V  NA+ S        A A EL+  +  +  + N  TF  
Sbjct: 881 KCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVA 940

Query: 484 VLKACAAMTDLEQG 497
           +L  C +   + QG
Sbjct: 941 LLSVCGSTGLVSQG 954



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 168/332 (50%), Gaps = 16/332 (4%)

Query: 30   DFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK 89
            D R AF  +    N D+I ++ +IS  A+  Q+  A +LF R+    + P+ F+ SS+++
Sbjct: 685  DARLAFEMV---TNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQ 741

Query: 90   ACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
            AC ++   ++   +H   +K+G  S +++ +  I+ YAK  ++ S+   F    D++ V+
Sbjct: 742  ACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVS 801

Query: 147  YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGV 203
            +  ++ GY  +G  + +  VF EMR+  +   + + ++VL A   +  +    Q+H    
Sbjct: 802  WNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIE 861

Query: 204  KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFG 262
            K  F S     ++N++++ Y +CG   DA ++F+ + E D+VSW+  I+  A  G  A  
Sbjct: 862  KSTFNSDTI--VSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMA 919

Query: 263  --LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGNALIS 319
              LF  +  N  + N+ T + LLS  G   ++  G  +  +     G    +     ++ 
Sbjct: 920  QELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVR 979

Query: 320  MYGKCGQVNDARS-IFDYLIFKDSVSWNSMIA 350
            + G+ G++NDA + I D      ++ W ++++
Sbjct: 980  LLGRAGRLNDALNFIGDIPSAPSAMVWRALLS 1011



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 18/259 (6%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            QI++  IK GH  +  +   LI  + K +D   +       ++ + +++N +I G ++  
Sbjct: 754  QIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSG 813

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE-NEI--VHGVCLKLGFSSRVYLVS 117
                AL +F  +R   +     T+SS+++AC S    N +  VH +  K  F+S   + +
Sbjct: 814  FGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSN 873

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I++YAK G I  A   F    + D V++ A++ GY  +G+   ++E+F  M    ++ 
Sbjct: 874  SLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKA 933

Query: 178  NEFSLTAVL---GASFDVKEGEQIH-----GFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            N+ +  A+L   G++  V +G  +        G++       C      I+ L  R G+ 
Sbjct: 934  NDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTC------IVRLLGRAGRL 987

Query: 230  LDAVKMFDEI-TEPDVVSW 247
             DA+    +I + P  + W
Sbjct: 988  NDALNFIGDIPSAPSAMVW 1006



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 6/115 (5%)

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALK----ARYDQDIFVESAVIDMYCKCGTIED 531
           V+   ++ +L+ C A  D   G+A+H   ++    AR   D+F  + +++MY K G    
Sbjct: 426 VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARL--DLFCANVLLNMYTKVGPFGS 483

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           A R F  +   ++  +  ++ G+A  G + E S LF ++   G + ++     VL
Sbjct: 484 AHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 220/745 (29%), Positives = 371/745 (49%), Gaps = 65/745 (8%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC-QSGPALKLFDRLRYQGLRPD 80
           +S   +  D   A   L     R+ +++N +IS LAR     G A++++ R+R +GL P 
Sbjct: 81  LSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPT 140

Query: 81  AFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            FT +S++ ACG   +L +    HGV +K+G  +  ++ +  +  Y K G +  A   F 
Sbjct: 141 HFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFY 200

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV----- 192
                + V++TAM+ G    G  D +  +F  M   G+ ++  S+++VLGA         
Sbjct: 201 GMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDY 260

Query: 193 ------KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                 + G+ IH   V+ GF  G   H+ N+++++Y +C +  +AVK+F+ +    +VS
Sbjct: 261 SVARAFRLGQAIHALVVRKGF--GSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVS 318

Query: 247 WSERI------AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           W+  I       +    VE   L ++     F+ NE T  NLL+S               
Sbjct: 319 WNILITGFGQEGSCAKAVEVLSLMQEA---GFEPNEVTYSNLLAS--------------- 360

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
            C K                      V+ AR++FD +      +WN++++GY +      
Sbjct: 361 -CIKAR-------------------DVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQD 400

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCL 418
            +++F  M   ++ P+  T+A IL + S    L    QVHS  ++  FLL + M   S L
Sbjct: 401 TIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVR--FLLHNDMFVASGL 458

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC  +  ++ + +++ +++ V  N++ S L   S + EA + ++ +  +      
Sbjct: 459 VDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTE 518

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           S+++ ++ +C+ ++ +  G+ IH   +K  YDQ+++V SA+IDMY KCG ++DA+  F  
Sbjct: 519 SSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDT 578

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +   ++  WN M+ GYAQ+G   +   LF  M     KPD +T++AVLT C H+GLV +A
Sbjct: 579 MMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKA 638

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             + + M + +G+IP  EHY C++D LGR G     +  I +MP   D  IW+ LL+AC 
Sbjct: 639 MAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACV 698

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ N +LG  A   L  + P N S YVLLSN+YAS G   D   +R  M  + + K  GY
Sbjct: 699 VHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGY 758

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEI 743
           SWI        F   D   +   E+
Sbjct: 759 SWIDQKDGVRAFMVADDLGADGGEL 783



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 227/504 (45%), Gaps = 54/504 (10%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + + +K G   +  +   L+  +TK      A R  +     + +++ A++ GLA+    
Sbjct: 164 HGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSI 223

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG-----------SLQENEIVHGVCLKLGFSS 111
             AL+LF R+   G+  D  + SS++ AC            + +  + +H + ++ GF S
Sbjct: 224 DDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGS 283

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++ +  I+ Y K  E+  A   F     +  V++  ++ G+   G   K+ EV   M+
Sbjct: 284 DQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQ 343

Query: 172 SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G E NE + + +L +    ++   +H                                
Sbjct: 344 EAGFEPNEVTYSNLLASCIKARD---VH-------------------------------S 369

Query: 232 AVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           A  MFD+I+ P V +W+  ++  C      D +E   LF+ ++  + Q +  T+  +LSS
Sbjct: 370 ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIE---LFRRMQHQNVQPDRTTLAVILSS 426

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                IL  G+Q+ +   +      + + + L+ MY KCGQ+  ARSIF+ +  +D V W
Sbjct: 427 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 486

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NS+I+G + +    +A D F  M E  ++P   + AS++ + S   S+    Q+H+ ++K
Sbjct: 487 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 546

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G+  +  + S LI  Y KC  +++++     +  KN V  N +           +A+EL
Sbjct: 547 DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVEL 606

Query: 466 YRTIWGSCREVNGSTFSIVLKACA 489
           +  +  + ++ +  TF  VL  C+
Sbjct: 607 FEYMLTTEQKPDAVTFIAVLTGCS 630



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 211/448 (47%), Gaps = 41/448 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L+++ G   D  +  +LI  +TK  +   A +      +  I+++N LI+G  +   
Sbjct: 272 IHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGS 331

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              A+++   ++  G  P+  T+S+L+ +C                              
Sbjct: 332 CAKAVEVLSLMQEAGFEPNEVTYSNLLASC------------------------------ 361

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
              K+ ++ SA   F          +  ++ GY    +   + E+F  M+   ++ +  +
Sbjct: 362 --IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 419

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L  +L +      +  G Q+H   V+  FL      + + ++++Y +CGQ   A  +F++
Sbjct: 420 LAVILSSCSKLGILDFGRQVHSASVR--FLLHNDMFVASGLVDMYSKCGQIGIARSIFNK 477

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +TE DVV W+  I+         EAF  FK +R N     E +  ++++S      +  G
Sbjct: 478 MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHG 537

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A   K G+ + V +G+ALI MY KCG ++DAR  FD ++ K+ V+WN MI GY++N
Sbjct: 538 RQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQN 597

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSM 414
           G  ++A+++F +ML     P+  T  ++L   S+S  + +AM   + +  S G +     
Sbjct: 598 GLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEH 657

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKN 442
            +CLI   G+     E + ++ ++  K+
Sbjct: 658 YTCLIDALGRAGRFVEVEALIHKMPCKD 685



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 204/491 (41%), Gaps = 84/491 (17%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------------------- 255
           L N ++ LY R G    A+  F  +  P+  S++  ++AAC                   
Sbjct: 45  LANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRN 104

Query: 256 ----------------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
                           DG EA  ++  +R        +T+ ++LS+ GG   L  G++  
Sbjct: 105 AVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCH 164

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
               KVG      + NAL+ MY KCG V DA  +F  +   + VS+ +M+ G ++ G  +
Sbjct: 165 GVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSID 224

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSN--------SKSLKQAMQVHSHIIKSGFLLD 411
            AL +F  M    +  +  +++S+L A +         +++ +    +H+ +++ GF  D
Sbjct: 225 DALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSD 284

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI  Y KC  ++E+ +V   +     V  N L +        A+A+E+   +  
Sbjct: 285 QHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQE 344

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  E N  T+S +L +C                +KAR                    +  
Sbjct: 345 AGFEPNEVTYSNLLASC----------------IKAR-------------------DVHS 369

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F KI R S+  WN ++ GY Q   + +   LF +M    V+PD  T   +L+SC  
Sbjct: 370 ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSK 429

Query: 592 AGLVREARTYLSCMSD--LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            G++   R   S      LH     +   + +VD+  + G +  A+   ++M    D   
Sbjct: 430 LGILDFGRQVHSASVRFLLHN---DMFVASGLVDMYSKCGQIGIARSIFNKM-TERDVVC 485

Query: 650 WQSLLSACTIY 660
           W S++S  TI+
Sbjct: 486 WNSIISGLTIH 496



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 172/362 (47%), Gaps = 15/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           ++ SL+ + G   + +  + L++   K  D   A R +FD  +R  + T+N L+SG  + 
Sbjct: 337 EVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSA-RAMFDKISRPSVTTWNTLLSGYCQE 395

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            Q    ++LF R+++Q ++PD  T + ++ +C   G L     VH   ++    + +++ 
Sbjct: 396 EQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVA 455

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           SG ++ Y+K G+I  A   F    + D V + +++ G   +    ++ + F +MR  G+ 
Sbjct: 456 SGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIM 515

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             E S  +++ +      +  G QIH   +K G+   V  ++ +A++++Y +CG   DA 
Sbjct: 516 PTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNV--YVGSALIDMYAKCGNMDDAR 573

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             FD +   ++V+W+E I        G +A  LF+ +   + + +  T I +L+      
Sbjct: 574 LFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 633

Query: 291 IL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++ +A     +     G + +      LI   G+ G+  +  ++   +  K D + W  +
Sbjct: 634 LVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVL 693

Query: 349 IA 350
           +A
Sbjct: 694 LA 695


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 217/645 (33%), Positives = 328/645 (50%), Gaps = 88/645 (13%)

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           S  V E   +H   +K  F S +   + N ++++Y +CG   DA K+FD + + +  SW+
Sbjct: 32  SKSVFEARLVHARIIKTQFSSEI--FIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWN 89

Query: 249 ERIAA-----ACDGVEAFGLFK-------------------------------DLRFNDF 272
             + A     A D  EA  LFK                               D+   DF
Sbjct: 90  AVLGALTKFGALD--EALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDF 147

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
            +NEY+  + LS+  G   L  G QI     K  +   V +G+AL+ MY KC  V  A+ 
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
            FD +  ++ VSWNS+I  Y +NG   +AL++F  M+   + P+  T+AS+  A ++  +
Sbjct: 208 AFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267

Query: 393 LKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVL---------------- 435
           +++ +Q+H+ ++K     +D ++ + L+  Y KC  +NE++ V                 
Sbjct: 268 IREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVS 327

Query: 436 ---------------SEIDKKNAVHINALASVLVYASCHAEALELY-----RTIWGSCRE 475
                          S + ++N V  NAL +       + EA+ L+      +IW +   
Sbjct: 328 GYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT--- 384

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY------DQDIFVESAVIDMYCKCGTI 529
               TF  +L ACA + DL+ G+  H   LK  +      D DIFV +++IDMY KCG +
Sbjct: 385 --HYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLV 442

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           ED +  F ++       WNAM++GYAQ+G   E   +F +M   G +PD +T + VL++C
Sbjct: 443 EDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSAC 502

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGLV E R Y   M+  HGL+P  +HY C+VDLLGR G L+ A   I  MP+ PDA +
Sbjct: 503 SHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVV 562

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W SLL+AC ++GNI LG     +LLE+ P N   YVLLSN+YA  G W DV ++RK+M++
Sbjct: 563 WGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             + K+PG SWI +  + H F   D  H   K+IY  L  L E M
Sbjct: 623 MGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQM 667



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 226/469 (48%), Gaps = 52/469 (11%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
             ++   TKF     A         RD  ++NA++SG A+  +   AL+    +  +   
Sbjct: 89  NAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFV 148

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + ++F S + AC  L +  I   +HG+  K  +S  VY+ S  ++ Y+K   + SA+  
Sbjct: 149 LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRA 208

Query: 136 FRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD--- 191
           F D +D+ N V++ +++  Y  NG   K+ EVFV M + G+E +E +L +V  A      
Sbjct: 209 FDD-MDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSA 267

Query: 192 VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQ---------------------- 228
           ++EG QIH   +K   + + +   L NA++++Y +C +                      
Sbjct: 268 IREGLQIHARVMKHDKYRNDLV--LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSM 325

Query: 229 -----KLDAVK----MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINE 276
                K  +VK    MF  + E +VVSW+  IA      +  EA  LF  L+        
Sbjct: 326 VSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTH 385

Query: 277 YTMINLLSSVGGERILRAGKQIQ------AFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           YT  NLL++      L+ G+Q         F +K G    + +GN+LI MY KCG V D 
Sbjct: 386 YTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG 445

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R +F+ ++ +D+VSWN+MI GY++NG+  +AL++F  ML     P+  TM  +L A S++
Sbjct: 446 RLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHA 505

Query: 391 KSLKQAM-QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
             +++      S  I+ G +      +C++   G+   L+E+  ++  +
Sbjct: 506 GLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 45/301 (14%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A +L+    SKS+ +A  VH+ IIK+ F  +  + + L+  YGKC  L ++++V   + +
Sbjct: 23  AKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQ 82

Query: 441 KNAVHINALASVLVYASCHAEALELYRTI-------WGSCRE------------------ 475
           +N    NA+   L       EAL L++ +       W +                     
Sbjct: 83  RNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDM 142

Query: 476 ------VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                 +N  +F   L ACA + DL  G  IH L  K+RY  D+++ SA++DMY KC  +
Sbjct: 143 HSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVV 202

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A+RAF  +   ++  WN+++  Y Q+G   +   +F +M   G++PDEIT  +V ++C
Sbjct: 203 ASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASAC 262

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYA-------CIVDLLGRVGLLEGAKMTIDQMP 642
                +RE          +H  + + + Y         +VD+  +   +  A++  D+MP
Sbjct: 263 ASLSAIREGLQ-------IHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315

Query: 643 I 643
           +
Sbjct: 316 L 316



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 195/403 (48%), Gaps = 47/403 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L+ K+ + LD  + + L+  ++K      A R   D   R+I+++N+LI+   +  
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ------------------ENEIVHG 102
            +G AL++F R+   G+ PD  T +S+  AC SL                    N++V G
Sbjct: 232 PAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG 291

Query: 103 --------VCLKLGFSSRVY-------LVS--GFIENYAKSGEIVSAEMCFRDCLDLDNV 145
                    C ++  +  V+       +VS    +  YAK+  + +A + F + ++ + V
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVV 351

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFG 202
           ++ A++ GY  NGE +++  +F+ ++   +    ++   +L A     D+K G Q H   
Sbjct: 352 SWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411

Query: 203 VKVGFL--SGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
           +K GF   SG  + +   N+++++Y++CG   D   +F+ + E D VSW+  I       
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNG 471

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK-QIQAFCYKVGFMEVVSIG 314
            G EA  +F+++  +  + +  TMI +LS+     ++  G+   Q+   + G + V    
Sbjct: 472 YGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY 531

Query: 315 NALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
             ++ + G+ G +++A ++   +  + D+V W S++A    +G
Sbjct: 532 TCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG 574



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 7/145 (4%)

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L R + G    ++ S F+ +L  C     + + + +H   +K ++  +IF+++ ++D+Y 
Sbjct: 6   LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG +EDA++ F  + + +   WNA++    + G   E  NLF  M     + D+ ++ A
Sbjct: 66  KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMP----ERDQCSWNA 121

Query: 585 VLTSCCHAGLVREARTYLSCMSDLH 609
           +++         EA   L  + D+H
Sbjct: 122 MVSGFAQRDRFEEA---LRFVVDMH 143


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1134

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 183/542 (33%), Positives = 310/542 (57%), Gaps = 10/542 (1%)

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDF 272
           +N ++++Y +C ++L A K+FD + E +VVSW+  ++      D   +  LF ++     
Sbjct: 407 SNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGI 466

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             NE+T    L + G    L  G QI  FC K+GF  +V +GN+L+ MY KCG++N+A  
Sbjct: 467 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 526

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI--PNGYTMASILEAVSNS 390
           +F +++ +  +SWN+MIAGY   G+ ++AL  F  M E  +   P+ +T+ S+L+A S++
Sbjct: 527 VFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586

Query: 391 KSLKQAMQVHSHIIKSGFLLDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
             +    Q+H  +++SGF    S  +   L+  Y KC  L  +++   +I +K  +  ++
Sbjct: 587 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSS 646

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           L           EA+ L++ +     +++    S ++   A    L+QGK +  L +K  
Sbjct: 647 LILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLP 706

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
              +  V ++++DMY KCG +++A++ F ++    +  W  M+ GY +HG   +  ++FN
Sbjct: 707 SGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFN 766

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           KM +  ++PDE+ YLAVL++C H+G+++E     S + +  G+ P++EHYAC+VDLLGR 
Sbjct: 767 KMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRA 826

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L+ AK  +D MPI P+  IWQ+LLS C ++G+I+LG   G  LL +   N + YV++S
Sbjct: 827 GRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMS 886

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS---KEIYK 745
           NLY  AG WN+ G  R+    K L KE G SW+ +    H F +G+ SH  +   +E  K
Sbjct: 887 NLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLK 946

Query: 746 EL 747
           E+
Sbjct: 947 EV 948



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 240/450 (53%), Gaps = 12/450 (2%)

Query: 9   NGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKL 68
           +G  L+ I S  LI  + K  +   A++       R+++++ AL+SG         +L L
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 69  FDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           F  +  QG+ P+ FTFS+ +KACG   +L++   +HG CLK+GF   V + +  ++ Y+K
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--LNEFSLT 183
            G I  AE  FR  +    +++ AM+ GYV  G   ++   F  M+   ++   +EF+LT
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577

Query: 184 AVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++L A      +  G+QIHGF V+ GF       +  ++++LYV+CG    A K FD+I 
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637

Query: 241 EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           E  ++SWS  I   A   D VEA GLFK L+    QI+ + + +++       +L+ GKQ
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +QA   K+      S+ N+L+ MY KCG V++A   F  +  KD +SW  MI GY ++G 
Sbjct: 698 MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMIS 416
             +A+ +F  ML  ++ P+     ++L A S+S  +K+  ++ S ++++ G        +
Sbjct: 758 GKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYA 817

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           C++   G+   L E+K ++  +  K  V I
Sbjct: 818 CVVDLLGRAGRLKEAKHLVDTMPIKPNVGI 847



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 183/365 (50%), Gaps = 17/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   +K G  +   +  +L+  ++K      A +       R +I++NA+I+G     
Sbjct: 491 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAG 550

Query: 61  QSGPALKLFDRLRYQGL--RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF--SSRV 113
               AL  F  ++   +  RPD FT +SL+KAC   G +   + +HG  ++ GF   S  
Sbjct: 551 YGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 610

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            +    ++ Y K G + SA   F    +   +++++++ GY   G+F ++  +F  ++ L
Sbjct: 611 TITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQEL 670

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
             +++ F L++++G   D   +++G+Q+    VK+   SG+   ++N+++++Y++CG   
Sbjct: 671 SSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLP--SGLETSVSNSLVDMYLKCGLVD 728

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A K F E+   DV+SW+  I        G +A  +F  +  ++ + +E   + +LS+  
Sbjct: 729 EAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACS 788

Query: 288 GERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-W 345
              +++ G+++        G    V     ++ + G+ G++ +A+ + D +  K +V  W
Sbjct: 789 HSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIW 848

Query: 346 NSMIA 350
            ++++
Sbjct: 849 QTLLS 853


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 196/576 (34%), Positives = 319/576 (55%), Gaps = 10/576 (1%)

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLDAVKMFDEI 239
           L    G   D++ G ++H     V   +  CN   LN  I+ +Y  CG   D+  +FD++
Sbjct: 111 LLQACGQRKDIEVGRRLHEM---VSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 167

Query: 240 TEPDVVSWSERIAAACDGV---EAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILRAG 295
              ++  W+  ++A        +A  +F +L    + + + +T+  ++ +  G   L  G
Sbjct: 168 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 227

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMIAGYSE 354
           + I     K+  +  V +GNALI+MYGKCG V +A + +FD +  K   SWN+++ GY++
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQ 287

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +ALD++  M +  L P+ +T+ S+L A S  KSL    ++H   +++G  +D  +
Sbjct: 288 NSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 347

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
              L++ Y  C     ++ +   ++ ++ V  N + +         EA+ L+R +     
Sbjct: 348 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           +        V  AC+ ++ L  GK +HC ALKA   +DIFV S++IDMY K G I  ++R
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 467

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F ++    +A WN ++ GY  HG   E   LF KM + G+KPD+ T+  +L +C HAGL
Sbjct: 468 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 527

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V +   Y + M +LH + P+LEHY C+VD+LGR G ++ A   I++MP  PD+ IW SLL
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           S+C I+GN+ LG    +KLLEL+P+    YVL+SNL+A +G W+DV ++R  MK+  L K
Sbjct: 588 SSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 647

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + G SWI VGG  H+F  GD    + +E+ +   +L
Sbjct: 648 DAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRL 683



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 255/525 (48%), Gaps = 40/525 (7%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRL 72
           D +L+T +I+ ++       + R +FD   R ++  +NA++S   R      A+ +F  L
Sbjct: 140 DFVLNTRIITMYSMCGSPSDS-RMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 198

Query: 73  -RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
                 +PD FT   ++KAC  L +    +I+HG+  K+   S V++ +  I  Y K G 
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258

Query: 129 IVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           +  A     D +D   V ++ A++CGY  N +  K+ +++++M   GL+ + F++ ++L 
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318

Query: 188 ASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A   +K    GE+IHGF ++ G    V   +  ++++LY+ CG+   A  +FD +    +
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGL--AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 376

Query: 245 VSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  IA  + +G+  EA  LF+ +  +  Q  E  ++ +  +      LR GK++  F
Sbjct: 377 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCF 436

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K    E + + +++I MY K G +  ++ IFD L  KD  SWN +IAGY  +G   +A
Sbjct: 437 ALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEA 496

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLIT 420
           L++F  ML   L P+ +T   IL A S++  ++  ++  + ++    +       +C++ 
Sbjct: 497 LELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVD 556

Query: 421 TYGKCNALNESKRVLSEI--DKKNAVHINALASVLVYAS-------------CHAEALEL 465
             G+   ++++ R++ E+  D  + +  + L+S  ++ +                E  E 
Sbjct: 557 MLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPEN 616

Query: 466 YRTI---------WGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           Y  I         W   R V G    I L+  A  + +E G  +H
Sbjct: 617 YVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVH 661



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+   ++NG  +DP +  +L+S +        A + LFD  ++R ++++N +I+G ++ 
Sbjct: 331 EIHGFALRNGLAVDPFIGISLLSLYICCGK-PFAAQVLFDGMEHRSLVSWNVMIAGYSQN 389

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                A+ LF ++   G++P       +  AC  L    +   +H   LK   +  +++ 
Sbjct: 390 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 449

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I+ YAK G I  ++  F    + D  ++  ++ GY  +G   ++ E+F +M  LGL+
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F+ T +L A      V++G +     + +  +     H    ++++  R G+  DA+
Sbjct: 510 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY-TCVVDMLGRAGRIDDAL 568

Query: 234 KMFDEIT-EPDVVSWSERIAA 253
           ++ +E+  +PD   WS  +++
Sbjct: 569 RLIEEMPGDPDSRIWSSLLSS 589



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 90/180 (50%), Gaps = 15/180 (8%)

Query: 483 IVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           ++L+AC    D+E G+ +H  ++   ++  D  + + +I MY  CG+  D++  F K+ R
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREART 600
            +L  WNA++  Y ++  + +  ++F+++ S    KPD  T   V+ +C  AGL+     
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLD---- 223

Query: 601 YLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            L     +HG+  +++  +       ++ + G+ GL+E A   +  +        W +LL
Sbjct: 224 -LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 238/776 (30%), Positives = 389/776 (50%), Gaps = 22/776 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +I +G  LD  LS  L++ +++      A +       R+++T++ ++S       
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 62  SGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQENE-----IVHGVCLKLGFSSRVYL 115
              +L +F D  R +   P+ +  SS ++AC  L  +       +    +K  F   VY+
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y K G I  A + F    +   V +T M+ G V  G    S ++F ++    +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245

Query: 176 ELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             + + L+ VL A     F ++ G+QIH   ++ G        L N +++ YV+CG+   
Sbjct: 246 VPDGYILSTVLSACSILPF-LEGGKQIHAHILRYGHEKDAS--LMNVLIDSYVKCGRVRA 302

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FD +   +++SW+  ++         EA  LF  +     + + +   ++L+S   
Sbjct: 303 AHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCAS 362

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G Q+ A+  K        + N+LI MY KC  + +AR +FD     D V +N+M
Sbjct: 363 LHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAM 422

Query: 349 IAGYSENGF---FNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           I GYS  G     + AL++F H + F LI P+  T  S+L A ++  SL  + Q+H  + 
Sbjct: 423 IEGYSRLGTQWELHDALNIF-HDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G  LD    S LI  Y  C  L +S+ V  E+  K+ V  N++ S  V  S + EAL 
Sbjct: 482 KFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALN 541

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +  S    +  TF  ++ A   +  L+ G+  HC  LK   + + ++ +A++DMY 
Sbjct: 542 LFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYA 601

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG+ EDA +AF       +  WN+++  YA HG   +   +  KM   G++P+ IT++ 
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVG 661

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL++C HAGLV +       M    G+ P+ EHY C+V LLGR G L  A+  I++MP  
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTK 720

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P A +W+SLLS C   GN++L   A    +   P +  ++ LLSN+YAS GMW D  K+R
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVR 780

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAKL 760
           + MK + + KEPG SWI +    H F + D SH ++ +IY+ L  L   +    KL
Sbjct: 781 ERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGHMKL 836



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 170/672 (25%), Positives = 302/672 (44%), Gaps = 56/672 (8%)

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
           + +VHG  +  G     YL +  +  Y+++G +V A   F    + + V ++ MV     
Sbjct: 63  HNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNH 122

Query: 157 NGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKEGE-----QIHGFGVKVGFLSG 210
           +G +++S  VF++  R+     NE+ L++ + A   +         Q+  F VK  F   
Sbjct: 123 HGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRD 182

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAF---GLFKDL 267
           V  ++   +++ Y++ G    A  +FD + E   V+W+  I+       ++    LF  L
Sbjct: 183 V--YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
              +   + Y +  +LS+      L  GKQI A   + G  +  S+ N LI  Y KCG+V
Sbjct: 241 MEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRV 300

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
             A  +FD +  K+ +SW ++++GY +N    +A+++F  M +F L P+ +  +SIL + 
Sbjct: 301 RAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSC 360

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           ++  +L+   QVH++ IK+    D  + + LI  Y KC+ L E+++V       + V  N
Sbjct: 361 ASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFN 420

Query: 448 ALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
           A+           E   AL ++  +       +  TF  +L+A A++T L   K IH L 
Sbjct: 421 AMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
            K   + DIF  SA+I +Y  C  ++D++  F ++    L  WN+M  GY Q     E  
Sbjct: 481 FKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEAL 540

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           NLF ++     +PDE T++ ++T+  +   ++  + +  C     GL         ++D+
Sbjct: 541 NLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEF-HCQLLKRGLECNPYITNALLDM 599

Query: 625 LGRVGLLEGAKMTID---------------------------QM-------PIPPDAHIW 650
             + G  E A    D                           QM        I P+   +
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITF 659

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
             +LSAC+  G ++ GL     +L   ++P+ E  YV + +L   AG  N+     +E+ 
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH-YVCMVSLLGRAGRLNEA----RELI 714

Query: 709 EKFLCKEPGYSW 720
           EK   K     W
Sbjct: 715 EKMPTKPAAIVW 726



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 220/459 (47%), Gaps = 22/459 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +++ GH  D  L   LI  + K    R A +      N++II++  L+SG  +  
Sbjct: 270 QIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNS 329

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A++LF  +   GL+PD F  SS++ +C SL   E    VH   +K    +  Y+ +
Sbjct: 330 LHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTN 389

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG---EFDKSKEVFVEMRSLG 174
             I+ YAK   +  A   F      D V + AM+ GY   G   E   +  +F +MR   
Sbjct: 390 SLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRL 449

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHG----FGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           +  +  +  ++L AS  +      +QIHG    FG+ +   +G      +A++ +Y  C 
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAG------SALIAVYSNCY 503

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
              D+  +FDE+   D+V W+   +      +  EA  LF +L+ +  + +E+T +++++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVT 563

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           + G    L+ G++      K G      I NAL+ MY KCG   DA   FD    +D V 
Sbjct: 564 AAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WNS+I+ Y+ +G   +AL M   M+   + PN  T   +L A S++  ++  ++    ++
Sbjct: 624 WNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           + G   +     C+++  G+   LNE++ ++ ++  K A
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPA 722


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 210/706 (29%), Positives = 381/706 (53%), Gaps = 30/706 (4%)

Query: 76  GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVS 131
           G++PD F F +L+KA   LQ+ ++   +H    K G+    V + +  +  Y K G+  +
Sbjct: 88  GIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 147

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--S 189
               F    + + V++ +++       +++ + E F  M    +E + F+L +V  A  +
Sbjct: 148 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSN 207

Query: 190 FDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
           F + EG    +Q+H +G++ G L+   + + N ++ +Y + G+   +  +       D+V
Sbjct: 208 FPMPEGLLMGKQVHAYGLRKGELN---SFIINTLVAMYGKMGKLASSKVLLGSFEGRDLV 264

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +W+  +++ C     +EA    +++     + + +T+ ++L +     +LR GK++ A+ 
Sbjct: 265 TWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYA 324

Query: 303 YKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
            K G ++  S +G+AL+ MY  C QV     +FD +  +    WN+MI GY++N +  +A
Sbjct: 325 LKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEA 384

Query: 362 LDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           L +F  M E + L+ N  TMA ++ A   S +  +   +H  ++K G   D  + + L+ 
Sbjct: 385 LLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMD 444

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV---- 476
            Y +   ++ +KR+  +++ ++ V  N + +  V++  H +AL +   +    R+     
Sbjct: 445 MYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERA 504

Query: 477 -------NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  N  T   +L +CAA++ L +GK IH  A+K     D+ V SA++DMY KCG +
Sbjct: 505 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 564

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + +++ F +I   ++  WN ++M Y  HG   +  ++   M   GVKP+E+T+++V  +C
Sbjct: 565 QMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAAC 624

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD-AH 648
            H+G+V E       M   +G+ P  +HYAC+VDLLGR G ++ A   I+ +P   D A 
Sbjct: 625 SHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAG 684

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W SLL AC I+ N+++G +A   L++L+P+  S YVLL+N+Y+SAG+W    ++R+ MK
Sbjct: 685 AWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMK 744

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + + KEPG SWI  G   H F AGDSSH QS+++   L  L+E M
Sbjct: 745 AQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERM 790



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 141/586 (24%), Positives = 273/586 (46%), Gaps = 44/586 (7%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI++ + K G+ +D + ++ TL++ + K  DF   ++       R+ +++N+LIS L  F
Sbjct: 114 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 173

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE------IVHGVCLKLGFSSRV 113
            +   AL+ F  +  + + P +FT  S+  AC +    E       VH   L+ G     
Sbjct: 174 EKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNS 232

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++++  +  Y K G++ S+++        D V +  ++     N +F ++ E   EM   
Sbjct: 233 FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLE 292

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E + F++++VL A      ++ G+++H + +K G L    + + +A++++Y  C Q L
Sbjct: 293 GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYCNCKQVL 351

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSV 286
              ++FD + +  +  W+  I          EA  LF ++  +     N  TM  ++ + 
Sbjct: 352 SGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPAC 411

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                    + I  F  K G      + NAL+ MY + G+++ A+ IF  +  +D V+WN
Sbjct: 412 VRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWN 471

Query: 347 SMIAGYSENGFFNQALDMFCHM--LE---------FSLIPNGYTMASILEAVSNSKSLKQ 395
           ++I GY  +     AL M   M  LE          SL PN  T+ +IL + +   +L +
Sbjct: 472 TIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAK 531

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             ++H++ IK+    D ++ S L+  Y KC  L  S++V  +I  +N +  N +      
Sbjct: 532 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGM 591

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--QDI 513
                +A+++ R +     + N  TF  V  AC+    + +G       LK  Y+  +D 
Sbjct: 592 HGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEG-------LKIFYNMKKDY 644

Query: 514 FVESA------VIDMYCKCGTIEDAKRAFRKICR--DSLAGWNAMM 551
            VE +      V+D+  + G +++A +    I R  D    W++++
Sbjct: 645 GVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 151/637 (23%), Positives = 275/637 (43%), Gaps = 72/637 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  ++ G  L+  +  TL++ + K      +   L   + RD++T+N ++S L +  
Sbjct: 219 QVHAYGLRKGE-LNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNE 277

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLG-FSSRVYLV 116
           Q   AL+    +  +G+ PD FT SS++ AC  L+     + +H   LK G      ++ 
Sbjct: 278 QFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 337

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGL 175
           S  ++ Y    +++S    F    D     + AM+ GY  N   +++  +F+EM  S GL
Sbjct: 338 SALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGL 397

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  ++  V+ A   S    + E IHGF VK G        + NA+M++Y R G+   A
Sbjct: 398 LANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRD--RFVQNALMDMYSRLGKIDIA 455

Query: 233 VKMFDEITEPDVVSW---------SERIAAACDGVEAFGLFKDLRFN-----DFQINEYT 278
            ++F ++ + D+V+W         SER   A   +    + +            + N  T
Sbjct: 456 KRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSIT 515

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           ++ +L S      L  GK+I A+  K      V++G+AL+ MY KCG +  +R +FD + 
Sbjct: 516 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 575

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            ++ ++WN ++  Y  +G    A+DM   M+   + PN  T  S+  A S+S  + + ++
Sbjct: 576 IRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLK 635

Query: 399 VHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           +  ++ K  G        +C++   G+   + E+ ++++ I  +N     A +S+L    
Sbjct: 636 IFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLI-PRNFDKAGAWSSLL---- 690

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ-DIFVE 516
                        G+CR  N     I   A   +  LE   A H + L   Y    ++ +
Sbjct: 691 -------------GACRIHN--NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYK 735

Query: 517 SAVIDMYCK---------CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           +  +    K         C  IE      + +  DS    +  + GY        +  L+
Sbjct: 736 ATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGY--------LETLW 787

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
            +M K G  PD        TSC    +  + +  L C
Sbjct: 788 ERMRKEGYIPD--------TSCVLHNVEEDEKEILLC 816



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 5/259 (1%)

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W  ++     +    +A+  +  M+   + P+ +   ++L+AV++ + +    Q+H+H+ 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 405 KSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           K G+ +D  ++ + L+  Y KC       +V   I ++N V  N+L S L        AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLE---QGKAIHCLALKARYDQDIFVESAVI 520
           E +R +     E +  T   V  AC+     E    GK +H   L+ + + + F+ + ++
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLV 239

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY K G +  +K          L  WN ++    Q+  + E      +M   GV+PD  
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299

Query: 581 TYLAVLTSCCHAGLVREAR 599
           T  +VL +C H  ++R  +
Sbjct: 300 TISSVLPACSHLEMLRTGK 318


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 245/796 (30%), Positives = 388/796 (48%), Gaps = 92/796 (11%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R +FD    RDII +N++IS    +C +G    A  L+D +    +R  A   S   +  
Sbjct: 54  REVFDAMPRRDIIAWNSMISA---YCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLG 110

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN---------------------------YA 124
             L+   +  G+ L+    +   ++S +++N                           Y 
Sbjct: 111 RVLEARRVFDGM-LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYC 169

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
            S ++V A   F    + + V++T M+ GY       K+ ++F +M   GL  ++ +  +
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFAS 229

Query: 185 VLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDE 238
            L A     + DV E  ++    +K GF   V   +  AI+N+Y R    LD A+K F+ 
Sbjct: 230 ALSAVKGLGNLDVLESLRV--LALKTGFERDVV--IGTAILNVYSRDTSVLDTAIKFFES 285

Query: 239 ITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLS--SVGGERILR 293
           + E +  +WS  IAA   G     A  +++             +  L     +   RIL 
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
             +QI           +V   NALI+ Y + G VN+A+ +FD + F++++SW  MIAGY+
Sbjct: 346 --EQIPE--------PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG   +AL +   +    ++P+  ++ SI  A SN  +L+   QVHS  +K G   +  
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY------------------ 455
             + LIT YGKC  +  +++V S +  K+ V  N+  + LV                   
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD 515

Query: 456 ---------ASCHAE----ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
                    A  HAE    A+  ++T++      N    +I+L  C ++   + G+ IH 
Sbjct: 516 DVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHT 575

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
           +A+K   D ++ V +A+I MY KCG   D++R F  +    +  WN ++ GYAQHG   E
Sbjct: 576 VAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGRE 634

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              ++  M   GV P+E+T++ +L +C HAGLV E   +   MS  +GL P  EHYAC+V
Sbjct: 635 AIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMV 694

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
           DLLGR G ++GA+  I  MPI PD  IW +LL AC I+ N ++G  A  KL  ++P N  
Sbjct: 695 DLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAG 754

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
            YV+LSN+Y+S GMW +V ++RK MK++ + KEPG SW  +    H F  GD  H Q +E
Sbjct: 755 NYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEE 814

Query: 743 IYKELIKLYEHMVATA 758
           I   L +LY  + AT 
Sbjct: 815 IVATLEELYTLLKATG 830



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 199/430 (46%), Gaps = 58/430 (13%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFCQSG 63
           L +K G   D ++ T +++ +++       A +F      R+  T++ +I+ L+   +  
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
            A+ +++R   + +       + L + CG + +  I+     +    S   L++G+++N 
Sbjct: 309 AAIAVYERDPVKSIACRTALITGLAQ-CGRIDDARILFEQIPEPIVVSWNALITGYMQN- 366

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G +  A+  F      + +++  M+ GY  NG  +++  +  E+   G+  +  SLT
Sbjct: 367 ---GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLT 423

Query: 184 AVLGASFDV---KEGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           ++  A  ++   + G Q+H   VKVG  F S  CN    A++ +Y +C     A ++F  
Sbjct: 424 SIFFACSNIVALETGTQVHSLAVKVGCQFNSFACN----ALITMYGKCRNMEYARQVFSR 479

Query: 239 ITEPDVVSWSERIAA----------------------------------ACDGVEAFGLF 264
           +   D+VSW+  +AA                                  A    EA G F
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539

Query: 265 KDLRFNDFQINEYTMINLL----SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           K + F + ++    ++ +L     S+G  +I   G+QI     K+G    + + NALISM
Sbjct: 540 KTM-FCEHELPNSPILTILLGVCGSLGASKI---GQQIHTVAIKLGMDSELIVANALISM 595

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG   D+R IFD +  +D  +WN++I GY+++G   +A+ M+ HM    ++PN  T 
Sbjct: 596 YFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTF 654

Query: 381 ASILEAVSNS 390
             +L A S++
Sbjct: 655 VGLLNACSHA 664



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 225/515 (43%), Gaps = 55/515 (10%)

Query: 24  HFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFT 83
           H  +  D R  F  +     R+++++  +ISG  R    G A  +F ++  +GL PD   
Sbjct: 170 HSLQMVDARNLFEKM---PERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSN 226

Query: 84  FS---SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV-SAEMCFRDC 139
           F+   S VK  G+L   E +  + LK GF   V + +  +  Y++   ++ +A   F   
Sbjct: 227 FASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVE--MRSLGLELNEFSLTAVLGASFDVK-EGE 196
           ++ +   ++ M+      G  D +  V+    ++S+       +  A  G   D +   E
Sbjct: 287 IERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFE 346

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-AC 255
           QI    + V +         NA++  Y++ G   +A ++FD++   + +SW+  IA  A 
Sbjct: 347 QIPE-PIVVSW---------NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396

Query: 256 DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           +G   EA GL ++L  +    +  ++ ++  +      L  G Q+ +   KVG       
Sbjct: 397 NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFA 456

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            NALI+MYGKC  +  AR +F  ++ KD VSWNS +A   +N   ++A + F +ML    
Sbjct: 457 CNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDD 516

Query: 374 I-------------------------------PNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +                               PN   +  +L    +  + K   Q+H+ 
Sbjct: 517 VSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTV 576

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            IK G   +  + + LI+ Y KC    +S+R+   +++++    N + +         EA
Sbjct: 577 AIKLGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREA 635

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +++Y+ +  +    N  TF  +L AC+    +++G
Sbjct: 636 IKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEG 670



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 120/559 (21%), Positives = 234/559 (41%), Gaps = 66/559 (11%)

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I +  + G +  A   F      D +A+ +M+  Y  NG  D +++++  +    + 
Sbjct: 38  SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
                L+   G    V E  ++    ++   ++       NA+++ YV+ G    A ++F
Sbjct: 98  TGAILLSG-YGRLGRVLEARRVFDGMLERNTVAW------NAMISCYVQNGDITMARRLF 150

Query: 237 DEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDF-----QINEYTMI-------- 280
           D +   DV SW+  +   C     V+A  LF+ +   +       I+ Y  I        
Sbjct: 151 DAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD 210

Query: 281 ------------------NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
                             + LS+V G   L   + ++    K GF   V IG A++++Y 
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270

Query: 323 KCGQVND-ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
           +   V D A   F+ +I ++  +W++MIA  S  G  + A+ ++    E   + +     
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY----ERDPVKSIACRT 326

Query: 382 SILEAVSNSKSLKQAM----QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           +++  ++    +  A     Q+   I+ S         + LIT Y +   +NE+K +  +
Sbjct: 327 ALITGLAQCGRIDDARILFEQIPEPIVVS--------WNALITGYMQNGMVNEAKELFDK 378

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  +N +    + +         EAL L + +  S    + S+ + +  AC+ +  LE G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             +H LA+K     + F  +A+I MY KC  +E A++ F ++    +  WN+ +    Q+
Sbjct: 439 TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN 498

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
               E  N F+ M    +  D++++  ++++  HA    EA      M   H    +L +
Sbjct: 499 DLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH----ELPN 550

Query: 618 YACIVDLLGRVGLLEGAKM 636
              +  LLG  G L  +K+
Sbjct: 551 SPILTILLGVCGSLGASKI 569



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 164/356 (46%), Gaps = 33/356 (9%)

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF----- 365
           VS  +A I   G+ G+V +AR +FD +  +D ++WNSMI+ Y  NG  + A D++     
Sbjct: 34  VSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISG 93

Query: 366 CHMLEFSLIPNGY-TMASILEAVSNSKSLKQAMQVHSHIIKSGFL----------LDDSM 414
            +M   +++ +GY  +  +LEA      + +   V  + + S ++          L D+M
Sbjct: 94  GNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153

Query: 415 ISCLITTY-----GKCNALN--ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            S  ++++     G C++L   +++ +  ++ ++N V    + S       H +A +++ 
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       + S F+  L A   + +L+  +++  LALK  +++D+ + +A++++Y +  
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273

Query: 528 TIED-AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           ++ D A + F  +   +   W+ M+   +  G       ++ +     +        A++
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA----CRTALI 329

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           T     G + +AR     + +     P +  +  ++    + G++  AK   D+MP
Sbjct: 330 TGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMP 380



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 40/291 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNA--------- 51
           Q++SL +K G   +      LI+ + K  +   A +       +DI+++N+         
Sbjct: 440 QVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQND 499

Query: 52  ----------------------LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK 89
                                 +IS  A   QS  A+  F  +  +   P++   + L+ 
Sbjct: 500 LLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLG 559

Query: 90  ACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
            CGSL  ++I   +H V +KLG  S + + +  I  Y K G    +   F    + D   
Sbjct: 560 VCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFT 618

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +  ++ GY  +G   ++ +++  M S G+  NE +   +L A      V EG +      
Sbjct: 619 WNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMS 678

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-MFDEITEPDVVSWSERIAA 253
           +   L+ +  H    +++L  R G    A + ++D   EPD V WS  + A
Sbjct: 679 QDYGLTPLPEHY-ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 221/719 (30%), Positives = 372/719 (51%), Gaps = 18/719 (2%)

Query: 43  NRDIITYNALISGLAR---FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI 99
           N    +YNA+I+ L+    FC     L  +  +      PDA TF SLVKAC SL  +  
Sbjct: 10  NPATKSYNAIINRLSTAGAFCD---VLLTYSSMLSTDTPPDAHTFPSLVKACTSL--DLF 64

Query: 100 VHGVCLKL-----GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
            HG+         G+SS  Y+ +  I  Y+K G   SA   F    D + V +T M+  Y
Sbjct: 65  SHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCY 124

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH 214
              GE D +  ++  MR  G++ +  ++  +L    ++   + +H   ++ GF S V   
Sbjct: 125 TRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVA-- 182

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND 271
           L N+++N+Y +CG+  DA  +F+ +   DV+SW+  +   A   +  E   L   ++ + 
Sbjct: 183 LANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDG 242

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + ++ T  +L+S+   +  L  GK +     + G  +   I  +LI MY KCG VN A 
Sbjct: 243 IEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAF 302

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            IF+ ++ KD +SW +MI+G  +N   + A+ +F  ML+  ++P+  T+AS+L A +   
Sbjct: 303 RIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELG 362

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           S      VH +I++    LD    + L+T Y KC  L +S  V   + +++ V  NA+ S
Sbjct: 363 SFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVS 422

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    +AL L+  +  + +  +  T   +L+ACA++  L QGK IH    K+    
Sbjct: 423 GHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGP 482

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            I +++A++DMY KCG +  A++ F ++ +  L  W++++ GY  HG       +++   
Sbjct: 483 CILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFL 542

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             G++P+ + YL++L++C H GLV +  ++   M+   G+ P+LEH ACIVDLL R G +
Sbjct: 543 HTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRV 602

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           E A     +M   P   +   LL AC   GN++LG +   +++ L+P N   YV L++ Y
Sbjct: 603 EEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSY 662

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           AS   W+ VG++  +MK   L K PG+S+I + G    F+   SSH Q +EI   ++ L
Sbjct: 663 ASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIIDRVLLL 721



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 275/559 (49%), Gaps = 29/559 (5%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGP 64
           +I +G+  D  ++T+LI+ ++KF   + A R +FDT  +R+++ +  +I    R  +   
Sbjct: 74  VIVDGYSSDSYIATSLINFYSKFGHNQSA-RKVFDTMDDRNVVPWTTMIGCYTRAGEHDV 132

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA 124
           A  +++ +R QG++P + T   L+     L   + +H   ++ GF S V L +  +  Y 
Sbjct: 133 AFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYC 192

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K G +  A+  F      D +++ ++V GY   G   +  ++ + M++ G+E ++ +  +
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252

Query: 185 VLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           ++ A+     +  G+ +HG  ++ G      +H+  +++ +Y++CG    A ++F+ +  
Sbjct: 253 LVSAAAMQSKLGVGKMVHGHILRAGLEQD--SHIETSLIGMYLKCGNVNSAFRIFEGMMH 310

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV+SW+  I+          A  +F+ +  +    +  T+ ++L++         G  +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             +  +      +   N+L++MY KCG +  + S+FD +  +D VSWN++++G+++NG  
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF----LLDDSM 414
            +AL +F  M +    P+  T+ S+L+A ++  +L Q   +H+ + KS      L+D   
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID--- 487

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWG 471
            + L+  Y KC  L  +++    + +++ V   + +S++     H +   AL +Y     
Sbjct: 488 -TALVDMYSKCGDLGSAQKCFDRMPQQDLV---SWSSIIAGYGSHGKGETALRMYSDFLH 543

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           +  + N   +  +L AC+    ++QG +  H +      +  +   + ++D+  + G +E
Sbjct: 544 TGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVE 603

Query: 531 DA----KRAFRKICRDSLA 545
           +A    KR F K   D L 
Sbjct: 604 EAYSFYKRMFPKPSMDVLG 622



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 12/352 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +++ G   D  + T+LI  + K  +   AFR      ++D+I++ A+ISGL +   
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           +  A+ +F R+    + P   T +S++ AC   GS      VHG  L+      +   + 
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS 388

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK G +  +   F      D V++ A+V G+  NG   K+  +F EMR      +
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448

Query: 179 EFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++ ++L A   +    +G+ IH F  K     G C  ++ A++++Y +CG    A K 
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFVTKSCL--GPCILIDTALVDMYSKCGDLGSAQKC 506

Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD + + D+VSWS  IA   +   G  A  ++ D      Q N    +++LS+     ++
Sbjct: 507 FDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLV 566

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
             G     +     G    +     ++ +  + G+V +A S +  +  K S+
Sbjct: 567 DQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSM 618


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 219/707 (30%), Positives = 368/707 (52%), Gaps = 18/707 (2%)

Query: 48  TYNALISGLAR---FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVC 104
           +YNA+I+ L+    FC     L  +  +      PDA TF SLVKAC SL  +   HG+ 
Sbjct: 15  SYNAIINRLSTAGAFCD---VLLTYSSMLSTDTPPDAHTFPSLVKACTSL--DLFSHGLS 69

Query: 105 LKL-----GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
                   G+SS  Y+ +  I  Y+K G   SA   F    D + V +T M+  Y   GE
Sbjct: 70  FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI 219
            D +  ++  MR  G++ +  ++  +L    ++   + +H   ++ GF S V   L N++
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVA--LANSM 187

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINE 276
           +N+Y +CG+  DA  +F+ +   DV+SW+  +   A   +  E   L   ++ +  + ++
Sbjct: 188 LNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQ 247

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            T  +L+S+   +  L  GK +     + G  +   I  +LI MY KCG VN A  IF+ 
Sbjct: 248 QTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEG 307

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           ++ KD +SW +MI+G  +N   + A+ +F  ML+  ++P+  T+AS+L A +   S    
Sbjct: 308 MMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLG 367

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             VH +I++    LD    + L+T Y KC  L +S  V   + +++ V  NA+ S     
Sbjct: 368 TSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQN 427

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +AL L+  +  + +  +  T   +L+ACA++  L QGK IH    K+     I ++
Sbjct: 428 GHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID 487

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++DMY KCG +  A++ F ++ +  L  W++++ GY  HG       +++     G++
Sbjct: 488 TALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQ 547

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+ + YL++L++C H GLV +  ++   M+   G+ P+LEH ACIVDLL R G +E A  
Sbjct: 548 PNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYS 607

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
              +M   P   +   LL AC   GN++LG +   +++ L+P N   YV L++ YAS   
Sbjct: 608 FYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKR 667

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           W+ VG++  +MK   L K PG+S+I + G    F+   SSH Q +EI
Sbjct: 668 WDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEI 714



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 275/559 (49%), Gaps = 29/559 (5%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGP 64
           +I +G+  D  ++T+LI+ ++KF   + A R +FDT  +R+++ +  +I    R  +   
Sbjct: 74  VIVDGYSSDSYIATSLINFYSKFGHNQSA-RKVFDTMDDRNVVPWTTMIGCYTRAGEHDV 132

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA 124
           A  +++ +R QG++P + T   L+     L   + +H   ++ GF S V L +  +  Y 
Sbjct: 133 AFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYC 192

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K G +  A+  F      D +++ ++V GY   G   +  ++ + M++ G+E ++ +  +
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252

Query: 185 VLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           ++ A+     +  G+ +HG  ++ G      +H+  +++ +Y++CG    A ++F+ +  
Sbjct: 253 LVSAAAMQSKLGVGKMVHGHILRAGLEQD--SHIETSLIGMYLKCGNVNSAFRIFEGMMH 310

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV+SW+  I+          A  +F+ +  +    +  T+ ++L++         G  +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             +  +      +   N+L++MY KCG +  + S+FD +  +D VSWN++++G+++NG  
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF----LLDDSM 414
            +AL +F  M +    P+  T+ S+L+A ++  +L Q   +H+ + KS      L+D   
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILID--- 487

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWG 471
            + L+  Y KC  L  +++    + +++ V   + +S++     H +   AL +Y     
Sbjct: 488 -TALVDMYSKCGDLGSAQKCFDRMPQQDLV---SWSSIIAGYGSHGKGETALRMYSDFLH 543

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           +  + N   +  +L AC+    ++QG +  H +      +  +   + ++D+  + G +E
Sbjct: 544 TGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVE 603

Query: 531 DA----KRAFRKICRDSLA 545
           +A    KR F K   D L 
Sbjct: 604 EAYSFYKRMFPKPSMDVLG 622



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 12/352 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +++ G   D  + T+LI  + K  +   AFR      ++D+I++ A+ISGL +   
Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           +  A+ +F R+    + P   T +S++ AC   GS      VHG  L+      +   + 
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS 388

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK G +  +   F      D V++ A+V G+  NG   K+  +F EMR      +
Sbjct: 389 LVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPD 448

Query: 179 EFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++ ++L A   +    +G+ IH F  K     G C  ++ A++++Y +CG    A K 
Sbjct: 449 SITVVSLLQACASIGALHQGKWIHNFVTKSCL--GPCILIDTALVDMYSKCGDLGSAQKC 506

Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD + + D+VSWS  IA   +   G  A  ++ D      Q N    +++LS+     ++
Sbjct: 507 FDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLV 566

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
             G     +     G    +     ++ +  + G+V +A S +  +  K S+
Sbjct: 567 DQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSM 618


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 224/765 (29%), Positives = 379/765 (49%), Gaps = 21/765 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
            ++SLL + G   DP+    LI+ + K  D+  A   F+ +   Q  D++++NA+IS    
Sbjct: 252  LHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVE 311

Query: 59   FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVY 114
              + G A+ +F RLR +G+RP++ T  +++ A  +           HG   + G+   V 
Sbjct: 312  AGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVV 371

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + +  I  YAK G   +A   FR      D +++  M+        F K    F  M   
Sbjct: 372  VGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLA 431

Query: 174  GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            G++ N+ S  A+L A  + +    G +IH   +       V + +   ++++Y +CG   
Sbjct: 432  GIDPNKVSFIAILNACSNSEALDFGRKIHSL-ILTRRRDYVESSVATMLVSMYGKCGSIA 490

Query: 231  DAVKMFDEITEPD--VVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
            +A  +F E+  P   +V+W+  + A        EAFG   ++       +  +  ++LSS
Sbjct: 491  EAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSS 550

Query: 286  VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                       Q+   C          +  ALISM+G+C ++  ARS+FD +   D VSW
Sbjct: 551  C----YCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSW 606

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
             +M++  +EN  F +   +F  M    +IP+ +T+A+ L+   +S +L     +H+ + +
Sbjct: 607  TAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTE 666

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             G   D ++ + L+  Y  C    E+      +  ++ V  N +++    A    EA+ L
Sbjct: 667  IGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726

Query: 466  YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            +R +     + +  TFS  L        +  GK  H LA ++  D D+ V + ++ +Y K
Sbjct: 727  FRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAK 786

Query: 526  CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            CG +++A   FR  C+ ++   NA++   AQHG   E   +F KM + GV+PD  T +++
Sbjct: 787  CGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846

Query: 586  LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
            +++C HAG+V E  +    M +  G+ P LEHYAC VDLLGR G LE A+  I +MP   
Sbjct: 847  ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906

Query: 646  DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
            +  +W SLL  C + G+ +LG     ++LEL P N + +V+LSN+Y + G W D    RK
Sbjct: 907  NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966

Query: 706  EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            ++ ++ +   PG SW+ +G   H F AGD SH Q+ EIY  L KL
Sbjct: 967  KLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKL 1011



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 164/650 (25%), Positives = 293/650 (45%), Gaps = 26/650 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ L ++       ++   +I+ + K      A         +D++++ A+    A+  +
Sbjct: 153 IWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERR 212

Query: 62  SGP-ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
             P AL++F  +  Q L P+  TF + + AC SL++   +H +  + G        +  I
Sbjct: 213 FYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALI 272

Query: 121 ENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             Y K G+   A   F+      +LD V++ AM+   V  G    +  +F  +R  G+  
Sbjct: 273 NMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRP 332

Query: 178 NEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N  +L  +L A      D     + HG   + G+L  V   + NAI+++Y +CG    A 
Sbjct: 333 NSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVV--VGNAIISMYAKCGFFSAAW 390

Query: 234 KMFDEIT-EPDVVSWSERIAAACDGVEAFG----LFKDLRFNDFQINEYTMINLLSSVGG 288
            +F  I  + DV+SW+  + A+ D  ++FG     F  +       N+ + I +L++   
Sbjct: 391 TVFRRIRWKCDVISWNTMLGASEDR-KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449

Query: 289 ERILRAGKQIQA--FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF--KDSVS 344
              L  G++I +     +  ++E  S+   L+SMYGKCG + +A  +F  +    +  V+
Sbjct: 450 SEALDFGRKIHSLILTRRRDYVE-SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVT 508

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN M+  Y++N    +A      ML+  ++P+  +  S+L +   S   ++A  +   I+
Sbjct: 509 WNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCIL 565

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           +SG+     + + LI+ +G+C  L +++ V  E+D  + V   A+ S         E   
Sbjct: 566 ESGY-RSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHH 624

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +       +  T +  L  C   T L  GK IH    +   + DI VE+A+++MY 
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYS 684

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            CG   +A   F  +    L  WN M   YAQ G   E   LF  M   GVKPD++T+  
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFST 744

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
            L     + LV + + +    ++  GL   +     +V L  + G L+ A
Sbjct: 745 TLNVSGGSALVSDGKLFHGLAAE-SGLDSDVSVATGLVKLYAKCGKLDEA 793



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 286/605 (47%), Gaps = 44/605 (7%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D   +++L+++C     L + +  H +    G    ++L +  I  Y + G +  A   F
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE----LNEFSLTAVLGA---S 189
               + + V++TA++     +G F ++  +F   R++ LE     N ++L A+L A   S
Sbjct: 84  SKMEERNVVSWTALISANAQSGAFARAFALF---RTMLLESSAAPNSYTLVAMLNACANS 140

Query: 190 FDVKEGEQIHGFGVKVGFL--SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            D+  G  IH    ++G    S     + NA++N+Y +CG   DA+ +F  I E DVVSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSW 200

Query: 248 SERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           +    A         +A  +F+++       N   +I  ++++G    LR G  + +  +
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPN---VITFITALGACTSLRDGTWLHSLLH 257

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK---DSVSWNSMIAGYSENGFFNQ 360
           + G       GNALI+MYGKCG    A  +F  +  +   D VSWN+MI+   E G    
Sbjct: 258 EAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGD 317

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSK-SLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           A+ +F  +    + PN  T+ +IL A++ S      A + H  I +SG+L D  + + +I
Sbjct: 318 AMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAII 377

Query: 420 TTYGKCNALNESKRVLSEIDKK-NAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           + Y KC   + +  V   I  K + +  N +           + +  +  +  +  + N 
Sbjct: 378 SMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNK 437

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV----IDMYCKCGTIEDAKR 534
            +F  +L AC+    L+ G+ IH L L  R D   +VES+V    + MY KCG+I +A+ 
Sbjct: 438 VSFIAILNACSNSEALDFGRKIHSLILTRRRD---YVESSVATMLVSMYGKCGSIAEAEL 494

Query: 535 AFRK--ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CH 591
            F++  +   SL  WN M+  YAQ+    E      +M + GV PD +++ +VL+SC C 
Sbjct: 495 VFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS 554

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
               +EA+    C+ +       LE    ++ + GR   LE A+   D+M    D   W 
Sbjct: 555 ----QEAQVLRMCILESGYRSACLE--TALISMHGRCRELEQARSVFDEMD-HGDVVSWT 607

Query: 652 SLLSA 656
           +++SA
Sbjct: 608 AMVSA 612



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 159/361 (44%), Gaps = 15/361 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q+  + I    +    L T LIS   +  +  +A R +FD  +  D++++ A++S  A  
Sbjct: 558 QVLRMCILESGYRSACLETALISMHGRCRELEQA-RSVFDEMDHGDVVSWTAMVSATAEN 616

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                   LF R++ +G+ PD FT ++ +  C    +L   +I+H    ++G  + + + 
Sbjct: 617 RDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVE 676

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y+  G+   A   F      D V++  M   Y   G   ++  +F  M+  G++
Sbjct: 677 NALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVK 736

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ + +  L   G S  V +G+  HG   + G  S V   +   ++ LY +CG+  +A+
Sbjct: 737 PDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDV--SVATGLVKLYAKCGKLDEAI 794

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F    +  VV  +  I A        EA  +F  ++    + +  T+++++S+ G   
Sbjct: 795 SLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAG 854

Query: 291 ILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSM 348
           ++  G           G    +      + + G+ GQ+  A  I   + F+D ++ W S+
Sbjct: 855 MVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSL 914

Query: 349 I 349
           +
Sbjct: 915 L 915


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 221/742 (29%), Positives = 385/742 (51%), Gaps = 14/742 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S + K G+  D  +ST LI+ + K      A +   + + R+++++ A+ISG  +  
Sbjct: 222 QIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 281

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  AL LF +L   G++P+  +F+S++ AC     L E   +H    + G    V + +
Sbjct: 282 DSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGN 341

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y++ G + +A   F +   L+   + AM+ GY   G  +++  +F  M   G + 
Sbjct: 342 ALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAMEQKGFQP 400

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++F   SL A+     D+  G+++H      G+ + +   +  A++++Y +CG   +A K
Sbjct: 401 DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLT--VATALISMYAKCGSPEEARK 458

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+++ E +V+SW+  I+  C    G EAF  FK +R +D   +  T I LL+S      
Sbjct: 459 VFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPED 518

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I     + G +    + NALISMYG+CG + DAR +F  +  +D  SWN+MIA 
Sbjct: 519 LERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAA 578

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++G    A D+F          + YT  ++L AV+N + L     +H  + K GF  D
Sbjct: 579 NVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKD 638

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             +++ LI  Y KC +L +++ V S + +K+ V  NA+ +   ++    +AL+L++ +  
Sbjct: 639 IRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQL 698

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                + ST+S  L ACA +T +E GK IH    +A  + D  V +++I+MY +CG +  
Sbjct: 699 EGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCS 758

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK+ F K+    +  WNA++ GY Q+G  +     +  M +  + P++ T+ ++L+S   
Sbjct: 759 AKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQ 818

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G   +A  +L  +     + P  +HYA +V  LGR GLL+ A+  I+++     A +W+
Sbjct: 819 LGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWE 878

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPD-NESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           SLL AC I+ N++L   A   LL+ +   + +    L ++YA+AG W DV  L+  M+E 
Sbjct: 879 SLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEA 938

Query: 711 FLCKEPGYSWIHVGGYTHHFYA 732
            L      + I V    H+F A
Sbjct: 939 GLVALKSCT-IEVNSEFHNFIA 959



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 189/691 (27%), Positives = 349/691 (50%), Gaps = 13/691 (1%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+  LIS ++K      A       +++D++++NA+ISG A   +   A  LF +++
Sbjct: 134 DIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQ 193

Query: 74  YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +GL+P+  TF S++ AC S   L+  E +H    K G+ S V + +  I  Y K G + 
Sbjct: 194 REGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLE 253

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A   F +  + + V++TAM+ GYV +G+  ++  +F ++   G++ N+ S  ++LGA  
Sbjct: 254 LARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACT 313

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
              D+ EG ++H +  + G    V   + NA++++Y RCG   +A ++FD +   +  +W
Sbjct: 314 NPNDLGEGLKLHAYIKQAGLEQEVL--VGNALISMYSRCGSLANARQVFDNLRSLNRTTW 371

Query: 248 SERIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
           +  IA   +G+  EAF LF+ +    FQ +++T  +LL+       L  GK++ +     
Sbjct: 372 NAMIAGYGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIAST 431

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G+   +++  ALISMY KCG   +AR +F+ +  ++ +SWN+ I+    +    +A   F
Sbjct: 432 GWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAF 491

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M    + P+  T  ++L + ++ + L++   +H  I + G L ++ + + LI+ YG+C
Sbjct: 492 KQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRC 551

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             L +++ V   I +++    NA+ +  V    +  A +L+R       + +  TF  VL
Sbjct: 552 GNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVL 611

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           +A A + DL+ G+ IH L  K  + +DI V + +I MY KCG++ DA+  F  +    + 
Sbjct: 612 RAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVV 671

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM+  YA      +   LF +M   GV PD  TY   L +C     V   +   + +
Sbjct: 672 CWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQL 731

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
            +  G+         ++++  R G L  AK   ++M +  D + W +L++     G  ++
Sbjct: 732 KEA-GMETDTRVSNSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNALIAGYCQNGQGNI 789

Query: 666 GLLAGSKLLELQ-PDNESTYVLLSNLYASAG 695
            L     +L      N++T+  + + YA  G
Sbjct: 790 ALEYYELMLRASIVPNKATFTSILSSYAQLG 820



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 184/634 (29%), Positives = 313/634 (49%), Gaps = 32/634 (5%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL E + VH       F   +YL +  I  Y+K G I  A   F+   D D V++ AM+ 
Sbjct: 115 SLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMIS 174

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLS 209
           GY  +G   ++ ++F +M+  GL+ N+ +  ++L A      ++ GEQIH    K G+ S
Sbjct: 175 GYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYES 234

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKD 266
            V  +++ A++N+Y +CG    A K+F+E+ E +VVSW+  I+      D  EA  LF+ 
Sbjct: 235 DV--NVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRK 292

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           L  +  Q N+ +  ++L +      L  G ++ A+  + G  + V +GNALISMY +CG 
Sbjct: 293 LIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGS 352

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + +AR +FD L   +  +WN+MIAGY E G   +A  +F  M +    P+ +T AS+L  
Sbjct: 353 LANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAI 411

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++   L +  ++HS I  +G+  D ++ + LI+ Y KC +  E+++V +++ ++N +  
Sbjct: 412 CADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISW 471

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA  S         EA + ++ +       +  TF  +L +C +  DLE+G+ IH    +
Sbjct: 472 NAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQ 531

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
                +  V +A+I MY +CG + DA+  F +I R  L  WNAM+    QHG      +L
Sbjct: 532 WGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDL 591

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ------LEHYAC 620
           F K    G K D+ T++ VL +  +   +   R        +HGL+ +      +     
Sbjct: 592 FRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRM-------IHGLVEKGGFGKDIRVLTT 644

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG-----LLAGSKLLE 675
           ++ +  + G L  A+     +    D   W ++L+A   Y + D G     L    +L  
Sbjct: 645 LIKMYSKCGSLRDAENVFSTVQ-EKDVVCWNAMLAA---YAHSDRGQDALKLFQQMQLEG 700

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           + PD+ STY    N  A         K+  ++KE
Sbjct: 701 VNPDS-STYSTALNACARLTAVEHGKKIHAQLKE 733



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 165/362 (45%), Gaps = 49/362 (13%)

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           +KSL +  +VH H+  + F  D  + + LI+ Y KC ++ ++  V   ++ K+ V  NA+
Sbjct: 113 AKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAM 172

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S         EA +L+  +     + N +TF  +L AC +   LE G+ IH    KA Y
Sbjct: 173 ISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGY 232

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           + D+ V +A+I+MYCKCG++E A++ F ++   ++  W AM+ GY QHG   E   LF K
Sbjct: 233 ESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRK 292

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACI----VD 623
           + + G++P+++++ ++L +C +   + E          LH  I Q  LE    +    + 
Sbjct: 293 LIRSGIQPNKVSFASILGACTNPNDLGEGLK-------LHAYIKQAGLEQEVLVGNALIS 345

Query: 624 LLGRVGLLEGAKMTID---------------------------------QMPIPPDAHIW 650
           +  R G L  A+   D                                 Q    PD   +
Sbjct: 346 MYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLMEEAFRLFRAMEQKGFQPDKFTY 405

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLEL--QPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            SLL+ C    ++D G    S++     Q D      L+S +YA  G   +  K+  +M 
Sbjct: 406 ASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALIS-MYAKCGSPEEARKVFNQMP 464

Query: 709 EK 710
           E+
Sbjct: 465 ER 466



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 137/281 (48%), Gaps = 16/281 (5%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + N + ++  L+ C     L +GK +H     A++  DI++ + +I MY KCG+IEDA  
Sbjct: 97  QANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANN 156

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F+ +    +  WNAM+ GYA HG   E ++LF +M + G+KP++ T++++L S C + +
Sbjct: 157 VFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISIL-SACQSPI 215

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
             E    +       G    +     ++++  + G LE A+   ++M    +   W +++
Sbjct: 216 ALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR-ERNVVSWTAMI 274

Query: 655 SACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVG---KLRKEMKE 709
           S    +G+    L    KL+   +QP+     V  +++  +    ND+G   KL   +K+
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGIQPNK----VSFASILGACTNPNDLGEGLKLHAYIKQ 330

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             L +E     + VG      Y+   S + +++++  L  L
Sbjct: 331 AGLEQE-----VLVGNALISMYSRCGSLANARQVFDNLRSL 366


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 245/796 (30%), Positives = 388/796 (48%), Gaps = 92/796 (11%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R +FD    RDII +N++IS    +C +G    A  L+D +    +R  A   S   +  
Sbjct: 54  REVFDAMPRRDIIAWNSMISA---YCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLG 110

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN---------------------------YA 124
             L+   +  G+ L+    +   ++S +++N                           Y 
Sbjct: 111 RVLEARRVFDGM-LERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYC 169

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
            S ++V A   F    + + V++T M+ GY       K+ ++F +M   GL  ++ +  +
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFAS 229

Query: 185 VLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDE 238
            L A     + DV E  ++    +K GF   V   +  AI+N+Y R    LD A+K F+ 
Sbjct: 230 ALSAVKGLGNLDVLESLRV--LALKTGFERDVV--IGTAILNVYSRDTSVLDTAIKFFES 285

Query: 239 ITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLS--SVGGERILR 293
           + E +  +WS  IAA   G     A  +++             +  L     +   RIL 
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
             +QI           +V   NALI+ Y + G VN+A+ +FD + F++++SW  MIAGY+
Sbjct: 346 --EQIPE--------PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG   +AL +   +    ++P+  ++ SI  A SN  +L+   QVHS  +K G   +  
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY------------------ 455
             + LIT YGKC  +  +++V S +  K+ V  N+  + LV                   
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD 515

Query: 456 ---------ASCHAE----ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
                    A  HAE    A+  ++T++      N    +I+L  C ++   + G+ IH 
Sbjct: 516 DVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHT 575

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
           +A+K   D ++ V +A+I MY KCG   D++R F  +    +  WN ++ GYAQHG   E
Sbjct: 576 VAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGRE 634

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              ++  M   GV P+E+T++ +L +C HAGLV E   +   MS  +GL P  EHYAC+V
Sbjct: 635 AIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMV 694

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
           DLLGR G ++GA+  I  MPI PD  IW +LL AC I+ N ++G  A  KL  ++P N  
Sbjct: 695 DLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAG 754

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
            YV+LSN+Y+S GMW +V ++RK MK++ + KEPG SW  +    H F  GD  H Q +E
Sbjct: 755 NYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEE 814

Query: 743 IYKELIKLYEHMVATA 758
           I   L +LY  + AT 
Sbjct: 815 IVATLEELYTLLKATG 830



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 199/430 (46%), Gaps = 58/430 (13%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFCQSG 63
           L +K G   D ++ T +++ +++       A +F      R+  T++ +I+ L+   +  
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
            A+ +++R   + +       + L + CG + +  I+     +    S   L++G+++N 
Sbjct: 309 AAIAVYERDPVKSIACRTALITGLAQ-CGRIDDARILFEQIPEPIVVSWNALITGYMQN- 366

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G +  A+  F      + +++  M+ GY  NG  +++  +  E+   G+  +  SLT
Sbjct: 367 ---GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLT 423

Query: 184 AVLGASFDV---KEGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           ++  A  ++   + G Q+H   VKVG  F S  CN    A++ +Y +C     A ++F  
Sbjct: 424 SIFFACSNIVALETGTQVHSLAVKVGCQFNSFACN----ALITMYGKCRNMEYARQVFSR 479

Query: 239 ITEPDVVSWSERIAA----------------------------------ACDGVEAFGLF 264
           +   D+VSW+  +AA                                  A    EA G F
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539

Query: 265 KDLRFNDFQINEYTMINLL----SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           K + F + ++    ++ +L     S+G  +I   G+QI     K+G    + + NALISM
Sbjct: 540 KTM-FCEHELPNSPILTILLGVCGSLGASKI---GQQIHTVAIKLGMDSELIVANALISM 595

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG   D+R IFD +  +D  +WN++I GY+++G   +A+ M+ HM    ++PN  T 
Sbjct: 596 YFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTF 654

Query: 381 ASILEAVSNS 390
             +L A S++
Sbjct: 655 VGLLNACSHA 664



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/515 (23%), Positives = 225/515 (43%), Gaps = 55/515 (10%)

Query: 24  HFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFT 83
           H  +  D R  F  +     R+++++  +ISG  R    G A  +F ++  +GL PD   
Sbjct: 170 HSLQMVDARNLFEKM---PERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSN 226

Query: 84  FS---SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV-SAEMCFRDC 139
           F+   S VK  G+L   E +  + LK GF   V + +  +  Y++   ++ +A   F   
Sbjct: 227 FASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESM 286

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVE--MRSLGLELNEFSLTAVLGASFDVK-EGE 196
           ++ +   ++ M+      G  D +  V+    ++S+       +  A  G   D +   E
Sbjct: 287 IERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFE 346

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-AC 255
           QI    + V +         NA++  Y++ G   +A ++FD++   + +SW+  IA  A 
Sbjct: 347 QIPE-PIVVSW---------NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396

Query: 256 DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           +G   EA GL ++L  +    +  ++ ++  +      L  G Q+ +   KVG       
Sbjct: 397 NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFA 456

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            NALI+MYGKC  +  AR +F  ++ KD VSWNS +A   +N   ++A + F +ML    
Sbjct: 457 CNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDD 516

Query: 374 I-------------------------------PNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +                               PN   +  +L    +  + K   Q+H+ 
Sbjct: 517 VSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTV 576

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            IK G   +  + + LI+ Y KC    +S+R+   +++++    N + +         EA
Sbjct: 577 AIKLGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREA 635

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +++Y+ +  +    N  TF  +L AC+    +++G
Sbjct: 636 IKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEG 670



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 120/559 (21%), Positives = 234/559 (41%), Gaps = 66/559 (11%)

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I +  + G +  A   F      D +A+ +M+  Y  NG  D +++++  +    + 
Sbjct: 38  SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
                L+   G    V E  ++    ++   ++       NA+++ YV+ G    A ++F
Sbjct: 98  TGAILLSG-YGRLGRVLEARRVFDGMLERNTVAW------NAMISCYVQNGDITMARRLF 150

Query: 237 DEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDF-----QINEYTMI-------- 280
           D +   DV SW+  +   C     V+A  LF+ +   +       I+ Y  I        
Sbjct: 151 DAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD 210

Query: 281 ------------------NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
                             + LS+V G   L   + ++    K GF   V IG A++++Y 
Sbjct: 211 IFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYS 270

Query: 323 KCGQVND-ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
           +   V D A   F+ +I ++  +W++MIA  S  G  + A+ ++    E   + +     
Sbjct: 271 RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY----ERDPVKSIACRT 326

Query: 382 SILEAVSNSKSLKQAM----QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           +++  ++    +  A     Q+   I+ S         + LIT Y +   +NE+K +  +
Sbjct: 327 ALITGLAQCGRIDDARILFEQIPEPIVVS--------WNALITGYMQNGMVNEAKELFDK 378

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  +N +    + +         EAL L + +  S    + S+ + +  AC+ +  LE G
Sbjct: 379 MPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETG 438

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             +H LA+K     + F  +A+I MY KC  +E A++ F ++    +  WN+ +    Q+
Sbjct: 439 TQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQN 498

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
               E  N F+ M    +  D++++  ++++  HA    EA      M   H    +L +
Sbjct: 499 DLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH----ELPN 550

Query: 618 YACIVDLLGRVGLLEGAKM 636
              +  LLG  G L  +K+
Sbjct: 551 SPILTILLGVCGSLGASKI 569



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 164/356 (46%), Gaps = 33/356 (9%)

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF----- 365
           VS  +A I   G+ G+V +AR +FD +  +D ++WNSMI+ Y  NG  + A D++     
Sbjct: 34  VSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISG 93

Query: 366 CHMLEFSLIPNGY-TMASILEAVSNSKSLKQAMQVHSHIIKSGFL----------LDDSM 414
            +M   +++ +GY  +  +LEA      + +   V  + + S ++          L D+M
Sbjct: 94  GNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153

Query: 415 ISCLITTY-----GKCNALN--ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            S  ++++     G C++L   +++ +  ++ ++N V    + S       H +A +++ 
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       + S F+  L A   + +L+  +++  LALK  +++D+ + +A++++Y +  
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273

Query: 528 TIED-AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           ++ D A + F  +   +   W+ M+   +  G       ++ +     +        A++
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA----CRTALI 329

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           T     G + +AR     + +     P +  +  ++    + G++  AK   D+MP
Sbjct: 330 TGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMP 380



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 40/291 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNA--------- 51
           Q++SL +K G   +      LI+ + K  +   A +       +DI+++N+         
Sbjct: 440 QVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQND 499

Query: 52  ----------------------LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK 89
                                 +IS  A   QS  A+  F  +  +   P++   + L+ 
Sbjct: 500 LLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLG 559

Query: 90  ACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
            CGSL  ++I   +H V +KLG  S + + +  I  Y K G    +   F    + D   
Sbjct: 560 VCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFT 618

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +  ++ GY  +G   ++ +++  M S G+  NE +   +L A      V EG +      
Sbjct: 619 WNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMS 678

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-MFDEITEPDVVSWSERIAA 253
           +   L+ +  H    +++L  R G    A + ++D   EPD V WS  + A
Sbjct: 679 QDYGLTPLPEHY-ACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 217/654 (33%), Positives = 346/654 (52%), Gaps = 19/654 (2%)

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           S  V L    +    KSG +  A   F      + VA+T+++ GY  NG  + +  +F +
Sbjct: 45  SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 170 MRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M   G+  N+F+  A L A  D+   + GEQ+H   V+ GF       + + ++ +Y RC
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDA--WIGSCLIEMYSRC 162

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGVE----AFGLFKDLRFNDFQINEYTMINL 282
           G    A ++FD +  PDVV ++  I+A C   E    A  L + L+    + NE+TM  +
Sbjct: 163 GSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLK-QGLKPNEHTMTTI 221

Query: 283 LSSVGGERILRAGKQIQAFCYK-VGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           L++    R+L  G+QI  +  K +G   + V    ALI  Y + G+   A+++FD L  K
Sbjct: 222 LTAC--PRVL--GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCK 277

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW SM+  Y  +G   +AL +F  M+   + PN + ++ +L A     S+    Q+H
Sbjct: 278 NVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLH 334

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              IK   + D  + + L++ YG+   + E + +L++I+  + V      S         
Sbjct: 335 CSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGE 394

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +A+ L   +       NG  FS VL +CA +  L+QG   HCLALK   D +I   +A+I
Sbjct: 395 KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALI 454

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           +MY KCG +  A+ AF  +    +  WN+++ G+AQHG  ++   +F+KM   G+KPD+ 
Sbjct: 455 NMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDS 514

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+L VL  C H+G+V E   +   M D +   P   HYAC++D+LGR G  + A   I+ 
Sbjct: 515 TFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 574

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP  PDA IW++LL++C ++ N+D+G LA  +L+EL   + ++YVL+SN+YA  G W D 
Sbjct: 575 MPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDA 634

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K+R+ M E  + K+ G SWI +    H F + D SH  S  IY+ L +L   M
Sbjct: 635 RKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVM 688



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 154/611 (25%), Positives = 273/611 (44%), Gaps = 54/611 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +L    ++   K      A         ++++ + +++SG  R  +   AL +F  + 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+ P+ F  ++ + AC   G+L+  E VH + ++ GF+   ++ S  IE Y++ G + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
           +A+  F      D V YT+++  +  NGEF+ + E  ++M   GL+ NE ++T +L A  
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            V  G+QIHG+ +K   L     + + A+++ Y R G+   A  +FD +   +VVSW   
Sbjct: 227 RVL-GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285

Query: 251 IAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           +     DG   EA  +F D+       NE+ +  +L + G    +  G+Q+     K   
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDL 342

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  + + NAL+SMYG+ G V +  ++ + +   D VSW + I+   +NGF  +A+ + C 
Sbjct: 343 ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ 402

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M      PNGY  +S+L + ++  SL Q MQ H   +K G   +    + LI  Y KC  
Sbjct: 403 MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQ 462

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  ++     +   +    N+L           +ALE++  +  +  + + STF  VL  
Sbjct: 463 MGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMG 522

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESA-----VIDMYCKCGTIEDAKRAFR----- 537
           C     +E+G+    L  +   DQ  F  +      +IDM  + G  ++A R        
Sbjct: 523 CNHSGMVEEGE----LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578

Query: 538 ----------------------KICRDSL--------AGWNAMMMGYAQHGCYHEVSNLF 567
                                 K+  D L        A +  M   YA HG + +   + 
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638

Query: 568 NKMSKFGVKPD 578
            +M + GVK D
Sbjct: 639 RRMDETGVKKD 649



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 241/468 (51%), Gaps = 21/468 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + LI  +++      A        + D++ Y +LIS    FC
Sbjct: 135 QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA---FC 191

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCL-KLGFSSR-VYL 115
           ++G    A +   ++  QGL+P+  T ++++ AC  +   +I HG  + K+G  S+ VY 
Sbjct: 192 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQI-HGYLIKKIGLRSQSVYS 250

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  I+ Y+++GE   A+  F D L   N V++ +M+  Y+ +G  +++ +VF +M S G
Sbjct: 251 STALIDFYSRNGEFKLAKAVF-DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ NEF+L+ VLGA   +  G Q+H   +K   ++ +   ++NA++++Y R G   +   
Sbjct: 310 VDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDI--RVSNALLSMYGRTGLVEELEA 367

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           M ++I  PD+VSW+  I+A      G +A  L   +    F  N Y   ++LSS      
Sbjct: 368 MLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G Q      K+G    +  GNALI+MY KCGQ+  AR  FD +   D  SWNS+I G
Sbjct: 428 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 487

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           ++++G  N+AL++F  M    + P+  T   +L   ++S  +++       +I    F  
Sbjct: 488 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 547

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
             S  +C+I   G+    +E+ R+++++        +AL    + ASC
Sbjct: 548 APSHYACMIDMLGRNGRFDEALRMINDM----PFEPDALIWKTLLASC 591


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 227/717 (31%), Positives = 367/717 (51%), Gaps = 41/717 (5%)

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSS--RVYLVSGFIENYAKSGEIV 130
           G  PD F F +++KA   +QE    + +H    K G+ S   V + +  +  Y K G + 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F    + D V++ +++       E++ + + F  M   G E + F+L ++  A  
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124

Query: 191 DVKE------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           ++++      G+QIHG   + G      N   NA+M +Y + G+  DA  +     + D+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRTFSN---NALMAMYAKLGRLDDAKSLLVLFEDRDL 181

Query: 245 VSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           V+W+  I++       +EA    + +     + +  T  ++L +     +LR GK+I A+
Sbjct: 182 VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241

Query: 302 CYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
             +    +E   +G+AL+ MY  CGQV   R +FD ++ +    WN+MIAGY+++    +
Sbjct: 242 ALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEK 301

Query: 361 ALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           AL +F  M   + L  N  TM+SI+ A    + + +   +H ++IK G   +  + + LI
Sbjct: 302 ALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALI 361

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL------------YR 467
             Y +   +  SKR+   ++ ++ V  N + +  V     ++AL L            Y 
Sbjct: 362 DMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYD 421

Query: 468 TIWGSCREV----NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
             +   ++V    N  T   VL  CA+++ L +GK IH  A++      + V SA++DMY
Sbjct: 422 GDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMY 481

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-----VKPD 578
            KCG +  A+R F ++   ++  WN ++M Y  HG   E   LF  M   G     VKP 
Sbjct: 482 AKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPT 541

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           E+T++A+  SC H+G+V E  +    M + HG+ P  +HYACIVDL+GR G +E A   +
Sbjct: 542 EVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLV 601

Query: 639 DQMPIPPD-AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           + MP   D    W SLL AC IY NI++G +A   LL+LQPD  S YVLLSN+Y+SAG+W
Sbjct: 602 NTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLW 661

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +    LR+ MK   + KEPG SWI  G   H F AGD SH QS++++  L  L E +
Sbjct: 662 DKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERL 718



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 258/578 (44%), Gaps = 51/578 (8%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           +  TL++ + K      A++       RD +++N++IS L RF +   A+K F  +  +G
Sbjct: 49  IDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEG 108

Query: 77  LRPDAFTFSSLVKACGSLQENE------IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             P +FT  S+  AC +L++ +       +HG C + G   R +  +  +  YAK G + 
Sbjct: 109 FEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLD 167

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A+       D D V + +M+  +  N  F ++      M   G++ +  +  +VL A  
Sbjct: 168 DAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACS 227

Query: 189 SFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
             D ++ G++IH + ++   +    + + +A++++Y  CGQ      +FD + +  +  W
Sbjct: 228 HLDLLRTGKEIHAYALRTDDVIE-NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLW 286

Query: 248 SERIAAACDG---VEAFGLFKDLR-FNDFQINEYTMINLLSS-VGGERILRAGKQIQAFC 302
           +  IA         +A  LF ++        N  TM +++ + V  E I R  + I  + 
Sbjct: 287 NAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRK-EGIHGYV 345

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K G      + NALI MY + G +  ++ IFD +  +D VSWN++I  Y   G  + AL
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDAL 405

Query: 363 DMFCHML----------------EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            +   M                 +    PN  T+ ++L   ++  +L +  ++H++ I++
Sbjct: 406 LLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN 465

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
                 ++ S L+  Y KC  LN ++RV  ++  +N +  N +           E+LEL+
Sbjct: 466 LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELF 525

Query: 467 RTIW-----GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA--- 518
             +      G   +    TF  +  +C+    +++G     L+L  +   +  +E A   
Sbjct: 526 EDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEG-----LSLFHKMKNEHGIEPAPDH 580

Query: 519 ---VIDMYCKCGTIEDAKRAFRKICR--DSLAGWNAMM 551
              ++D+  + G +E+A      +    D +  W++++
Sbjct: 581 YACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLL 618


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 233/746 (31%), Positives = 376/746 (50%), Gaps = 26/746 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L + +G    P  +  L+S ++       A      +   D   +N+L+    R   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 62  SGPALKLFDRLRYQGLRPDAFT---FSSLVKACGSLQENEIVHGVCLKLGF---SSRVYL 115
               L    R+R  G RP  FT    +S     G+L     VH   ++ G       V +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLG 174
            S  +  YA+ G +  A   F +  + D VA+TA++ G V NG+  +     V M RS G
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 175 ---LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
                 N  ++ + L   G   ++  G  +HGFGVK G   G C  + +++ ++Y +C  
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGV--GHCPSVVSSLFSMYTKCDS 265

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA  +F E+ E D+VSW+  I A C      +A  LF  +  +  Q +E  +  LL+ 
Sbjct: 266 TEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAG 325

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           +G +  +R GK   A   +  F + V IGNALISMY KC QV+ A ++F  L  +D+ SW
Sbjct: 326 LGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSW 385

Query: 346 NSMIAGYSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           +SM+  Y + G   + L+++  M      EF    N  ++ SI+ + S    L+     H
Sbjct: 386 SSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTN--SLISIISSCSRLGRLRLGQSAH 443

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + IK     + S+ + LI+ YG+C   + ++++   +  K+ V  +AL S   +     
Sbjct: 444 CYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSK 503

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL LY  +     + N +T   V+ +CA +  LE G+ IH        + D+ + +A++
Sbjct: 504 DALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALV 563

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG +  A++ F  +    +  WN M+ GY  HG   +   LF+ M +  VKP+ +
Sbjct: 564 DMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSL 623

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+LA+L++CCHAGLV + R   + M + + L P L+HYAC+VDLLG+ G L+ A+  +  
Sbjct: 624 TFLAILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSA 682

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MPI PD  IW +LL AC ++ N ++GL    K     P+N+  Y+L+SN Y SA  WN++
Sbjct: 683 MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEI 742

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGY 726
            KLR  MK   + K  G+S I + G+
Sbjct: 743 EKLRDMMKNHGVEKSIGWSTIDICGF 768


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 213/629 (33%), Positives = 325/629 (51%), Gaps = 74/629 (11%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
           +H   +K GF + V   + N +++ Y +CG   D  ++FD++ + +V +W+  +      
Sbjct: 42  VHASVIKSGFSNEV--FIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99

Query: 257 GV--EAFGLFKDLRFND-------------------------------FQINEYTMINLL 283
           G   EA  LF+ +   D                               F +NEYT  + L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S+  G   +  G QI +   K   +  V IG+AL+ MY KCG VNDA+ +FD +  ++ V
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVV 219

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SWNS+I  Y +NG   +AL +F  MLE  + P+  T+AS++ A ++  ++K   +VH+ +
Sbjct: 220 SWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARV 279

Query: 404 IKSGFLLDDSMIS-CLITTYGKCNALNESKRVL--------------------------- 435
           +K   L +D ++S   +  Y KC+ + E++ +                            
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339

Query: 436 ----SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
               +++ ++N V  NAL +       + EAL L+  +          TF+ +LKACA +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADL 399

Query: 492 TDLEQGKAIHCLALKARY------DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            DL  G   H   LK  +      + DIFV +++IDMY KCG +E+    FRK+      
Sbjct: 400 ADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM++G+AQ+G  +E   LF +M   G KPD IT + VL++C HAG V E R Y S M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +   G+ P  +HY C+VDLLGR G LE AK  I++MP+ PD+ IW SLL+AC ++ NI L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITL 579

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G     KL E++  N   YVLLSN+YA  G W D   +RK M+++ + K+PG SWI + G
Sbjct: 580 GKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPG 639

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + H F   D SH + K+I+  L  L   M
Sbjct: 640 HAHVFMVKDKSHPRKKQIHSLLDILIAEM 668



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 216/467 (46%), Gaps = 48/467 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++++  TK      A         RD  T+N+++SG A+  +   AL  F  +  +G  
Sbjct: 90  NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFV 149

Query: 79  PDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            + +TF+S + AC  L +      +H +  K    S VY+ S  ++ Y+K G +  A+  
Sbjct: 150 LNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQV 209

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
           F +  D + V++ +++  Y  NG   ++ +VF  M    +E +E +L +V+ A      +
Sbjct: 210 FDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAI 269

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--------------- 237
           K G+++H   VK+  L      L+NA +++Y +C +  +A  +FD               
Sbjct: 270 KVGQEVHARVVKMDKLRNDI-ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVS 328

Query: 238 ----------------EITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYT 278
                           ++ E +VVSW+  IA      +  EA  LF  L+        YT
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYT 388

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFM------EVVSIGNALISMYGKCGQVNDARS 332
             N+L +      L  G Q      K GF       + + +GN+LI MY KCG V +   
Sbjct: 389 FANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  ++ +D VSWN+MI G+++NG+ N+AL++F  ML+    P+  TM  +L A  ++  
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGF 508

Query: 393 LKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +++     S + +  G        +C++   G+   L E+K ++ E+
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEM 555



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 189/402 (47%), Gaps = 55/402 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+SL+ K+    D  + + L+  ++K  +   A +   +  +R+++++N+LI+    + 
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITC---YE 229

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRV 113
           Q+GP   ALK+F  +    + PD  T +S++ AC SL   ++   VH   +K+    + +
Sbjct: 230 QNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDI 289

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN----------------------------- 144
            L + F++ YAK   I  A   F D + + N                             
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIF-DSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAE 348

Query: 145 ---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQI 198
              V++ A++ GY  NGE +++  +F  ++   +    ++   +L A  D+ +   G Q 
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQA 408

Query: 199 HGFGVKVG--FLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI--- 251
           H   +K G  F SG  + +   N+++++YV+CG   +   +F ++ E D VSW+  I   
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468

Query: 252 AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEV 310
           A    G EA  LF+++  +  + +  TMI +LS+ G    +  G+    +     G   +
Sbjct: 469 AQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
                 ++ + G+ G + +A+SI + + +  DSV W S++A 
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAA 570



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 67/128 (52%), Gaps = 5/128 (3%)

Query: 479 STFSIVLKACAAMT-DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
           S F+ +L +C  +       + +H   +K+ +  ++F+++ +ID Y KCG++ED ++ F 
Sbjct: 20  SPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFD 79

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           K+ + ++  WN+++ G  + G   E  +LF  M     + D+ T+ ++++         E
Sbjct: 80  KMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEE 135

Query: 598 ARTYLSCM 605
           A  Y + M
Sbjct: 136 ALYYFAMM 143


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 207/735 (28%), Positives = 386/735 (52%), Gaps = 17/735 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFC 60
            I+  ++K+G   D  L+  LIS +    +   A R LFD+   ++++ +N++IS  A+  
Sbjct: 278  IHGFVVKSGFSSDEFLTPALISMYAGGGNLFIA-RDLFDSAAEKNVVIWNSMISAYAQNQ 336

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +S  A K+F ++    ++P+  TF S++  C    +    + +H   +K    S++ + +
Sbjct: 337  KSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVAT 396

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              +  YAK G++ SA+  F      + +++ +M+ GY  NG ++ S + F +M+  G + 
Sbjct: 397  ALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDP 456

Query: 178  NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +  S+  +L A   ++    G+  H F  +  F S +  +++NA++  Y  CG+   + K
Sbjct: 457  DAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNL--NISNALLAFYSDCGKLSSSFK 514

Query: 235  MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            +F ++   + +SW+  I+      D  +A  L   ++    +++  T+I+++        
Sbjct: 515  LFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAEN 574

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            L  G  +  +  K GF   VS+ NALISMY  CG +N  + +F+ + ++  VSWN++I G
Sbjct: 575  LIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITG 634

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            Y  +   N+ +  FC M+     PN  T+ ++L +    ++L Q   +H+  +++G +++
Sbjct: 635  YRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC---RTLLQGKSIHAFAVRTGVIVE 691

Query: 412  DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
              +I+ LI+ Y +   +N    +     K++    NA+ SV V      E++  +  +  
Sbjct: 692  TPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLH 751

Query: 472  SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
            +  E +  TF  ++ AC  ++ L    ++    ++  +D+ I + +A+ID++ +CG I  
Sbjct: 752  ARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISI 811

Query: 532  AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            AK+ F  +       W+ M+ GY  HG       L ++M   G+KPD ITY +VL++C H
Sbjct: 812  AKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSH 871

Query: 592  AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
             G + +     + M +  G+  ++EHYAC+VDLLGR G L  A   ++++P  P   + +
Sbjct: 872  GGFIDQGWMIFNSMVE-EGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLE 930

Query: 652  SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            SLL AC I+GN+ LG    S L EL P N  +YV+L N+YA+AG W D  ++R +M+E+ 
Sbjct: 931  SLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQ 990

Query: 712  LCKEPGYSWIHVGGY 726
            L K PG+S +    Y
Sbjct: 991  LRKIPGFSLVEGNRY 1005



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 266/547 (48%), Gaps = 16/547 (2%)

Query: 56  LARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF 109
           + R C  G     L ++ + R  G   D FTF  ++KAC   G++   E VH + L+  F
Sbjct: 127 IRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSF 186

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFV 168
              + + +  ++ YAK+G +V A +        D V + A++ GY  NG FDK   EV  
Sbjct: 187 EENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNG-FDKEVFEVLR 245

Query: 169 EMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           ++  +GL+ N  +  +++     +K    G+ IHGF VK GF S     L  A++++Y  
Sbjct: 246 QINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSD--EFLTPALISMYAG 303

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
            G    A  +FD   E +VV W+  I+A        EAF +F+ +   + Q N  T +++
Sbjct: 304 GGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 363

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +           GK + A   K      +S+  AL+SMY K G +N A  IF  +  ++ 
Sbjct: 364 IPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNL 423

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +SWNSMI+GY  NG +  ++D FC M      P+  ++ +IL A S  +++      H+ 
Sbjct: 424 LSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAF 483

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
             +  F  + ++ + L+  Y  C  L+ S ++  ++  +NA+  N L S  V+     +A
Sbjct: 484 SFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKA 543

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           + L   +     E++  T   ++  C    +L QG  +H  A+K  +  D+ + +A+I M
Sbjct: 544 VALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISM 603

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y  CG I   K  F  +   S+  WNA++ GY  H   +EV   F +M + G KP+ +T 
Sbjct: 604 YFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTL 663

Query: 583 LAVLTSC 589
           L +L SC
Sbjct: 664 LNLLPSC 670



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 160/698 (22%), Positives = 339/698 (48%), Gaps = 18/698 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ ++++     + ++ T L+  + K     +A   L      D++T+NALISG +    
Sbjct: 177 VHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGF 236

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
                ++  ++   GL+P+  TF+S++  C  ++  +I   +HG  +K GFSS  +L   
Sbjct: 237 DKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPA 296

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  YA  G +  A   F    + + V + +M+  Y  N +  ++ ++F +M    ++ N
Sbjct: 297 LISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPN 356

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +  +++     S +   G+ +H   +K    S +   +  A++++Y + G    A  +
Sbjct: 357 VVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQL--SVATALLSMYAKLGDLNSADFI 414

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F ++   +++SW+  I+    +G+   +   F D++F  F  +  +++N+LS+      +
Sbjct: 415 FYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAI 474

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK   AF ++  F   ++I NAL++ Y  CG+++ +  +F  +  ++++SWN++I+G 
Sbjct: 475 LLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGC 534

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             NG   +A+ +   M +  +  +  T+ SI+     +++L Q M +H + IK+GF  D 
Sbjct: 535 VHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDV 594

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+++ LI+ Y  C  +N  K +   +  ++ V  NAL +   +     E +  +  +   
Sbjct: 595 SLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIRE 654

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
            ++ N  T   +L +C     L QGK+IH  A++     +  + +++I MY +   I   
Sbjct: 655 GQKPNYVTLLNLLPSCRT---LLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSF 711

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
              F    ++ +A WNA+M  Y Q     E    F ++    V+PD IT+L+++++C   
Sbjct: 712 IFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQL 771

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
             +  + + ++ +    G    +     ++DL  R G +  AK   + +    DA  W +
Sbjct: 772 SSLNLSNSVMAYVIQ-KGFDKHIVISNALIDLFARCGNISIAKKIFEGLS-SKDAVSWST 829

Query: 653 LLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLS 688
           +++   ++G+ +  L LL+  +L  ++PD  +   +LS
Sbjct: 830 MINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLS 867



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 144/310 (46%), Gaps = 2/310 (0%)

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N MI    ++G F   L ++          + +T   +++A +   ++  A  VH  +++
Sbjct: 124 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLR 183

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           + F  +  + + L+  Y K   + +++ VL +I + + V  NAL S         E  E+
Sbjct: 184 TSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 243

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            R I     + N STF+ ++  C  M  L+ GK+IH   +K+ +  D F+  A+I MY  
Sbjct: 244 LRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 303

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            G +  A+  F      ++  WN+M+  YAQ+    E   +F +M K  ++P+ +T++++
Sbjct: 304 GGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 363

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           +  C ++      ++ L      + L  QL     ++ +  ++G L  A     QMP   
Sbjct: 364 IPCCENSANFWYGKS-LHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMP-RR 421

Query: 646 DAHIWQSLLS 655
           +   W S++S
Sbjct: 422 NLLSWNSMIS 431


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 216/690 (31%), Positives = 360/690 (52%), Gaps = 20/690 (2%)

Query: 69  FDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           ++ +   G++PD  T+  ++K C    E      VHGV  KLGF   V++ +  +  Y  
Sbjct: 125 YNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGN 184

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL--GLELNEFSLT 183
            G    A   F +  + D V++  ++     +G ++++   F  M +   G++ +  ++ 
Sbjct: 185 CGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVV 244

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +VL    + ++      +H + +KVG L G    + NA++++Y +CG +  + K+FDEI 
Sbjct: 245 SVLPVCAETEDKVMARIVHCYALKVGLLGGHVK-VGNALVDVYGKCGSEKASKKVFDEID 303

Query: 241 EPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           E +V+SW+  I +        D ++ F L  D      + N  T+ ++L  +G   + + 
Sbjct: 304 ERNVISWNAIITSFSFRGKYMDALDVFRLMID---EGMRPNSVTISSMLPVLGELGLFKL 360

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G ++  F  K+     V I N+LI MY K G    A +IF+ +  ++ VSWN+MIA ++ 
Sbjct: 361 GMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFAR 420

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N    +A+++   M      PN  T  ++L A +    L    ++H+ II+ G  LD  +
Sbjct: 421 NRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFV 480

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L   Y KC  LN ++ V + I  ++ V  N L       +   E+L L+  +     
Sbjct: 481 SNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGM 539

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +  +F  V+ ACA +  + QGK IH L ++  +   +FV ++++D+Y +CG I+ A +
Sbjct: 540 RPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATK 599

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  I    +A WN M++GY   G      NLF  M + GV+ D ++++AVL++C H GL
Sbjct: 600 VFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGL 659

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           + + R Y   M DL+ + P   HYAC+VDLLGR GL+E A   I  + I PD +IW +LL
Sbjct: 660 IEKGRKYFKMMCDLN-IEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALL 718

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            AC I+GNI+LGL A   L EL+P +   Y+LLSN+YA A  W++  K+R+ MK +   K
Sbjct: 719 GACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKK 778

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            PG SW+ VG   H F  G+   S   + +
Sbjct: 779 NPGCSWVQVGDLVHAFLVGEKIDSLDDDFW 808



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 291/606 (48%), Gaps = 44/606 (7%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSR-VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           L   C +L + + VH   L  GF  R V L +  I  YA  G   ++ + F+      +V
Sbjct: 43  LCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQH-----SV 97

Query: 146 AYTAMVCGYVWN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VK 193
           AY+     ++WN         G FD        +R+ G++ +E +   VL    D   V+
Sbjct: 98  AYSR--SAFLWNTLIRANSIAGVFDGFGTYNTMVRA-GVKPDECTYPFVLKVCSDFVEVR 154

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA- 252
           +G ++HG   K+GF   V   + N ++  Y  CG   DA+K+FDE+ E D VSW+  I  
Sbjct: 155 KGREVHGVAFKLGFDGDV--FVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGL 212

Query: 253 AACDGV--EAFGLFKDL--RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
            +  G   EA G F+ +       Q +  T++++L            + +  +  KVG +
Sbjct: 213 CSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLL 272

Query: 309 EV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              V +GNAL+ +YGKCG    ++ +FD +  ++ +SWN++I  +S  G +  ALD+F  
Sbjct: 273 GGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRL 332

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M++  + PN  T++S+L  +      K  M+VH   +K     D  + + LI  Y K  +
Sbjct: 333 MIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGS 392

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
              +  + +++  +N V  NA+ +         EA+EL R +       N  TF+ VL A
Sbjct: 393 SRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPA 452

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA +  L  GK IH   ++     D+FV +A+ DMY KCG +  A+  F    RD ++ +
Sbjct: 453 CARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEVS-Y 511

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N +++GY++     E   LF++M   G++PD ++++ V+++C +   +R+ +       +
Sbjct: 512 NILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGK-------E 564

Query: 608 LHG-LIPQLEHYACIV-----DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           +HG L+ +L H    V     DL  R G ++ A      +    D   W +++    + G
Sbjct: 565 IHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQ-NKDVASWNTMILGYGMRG 623

Query: 662 NIDLGL 667
            +D  +
Sbjct: 624 ELDTAI 629



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/602 (22%), Positives = 273/602 (45%), Gaps = 20/602 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++ +  K G   D  +  TL++ +     F  A +   +   RD +++N +I   +   
Sbjct: 158 EVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHG 217

Query: 61  QSGPALKLFDRL--RYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLG-FSSRVY 114
               AL  F  +     G++PD  T  S++  C   ++     IVH   LK+G     V 
Sbjct: 218 FYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVK 277

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y K G   +++  F +  + + +++ A++  + + G++  + +VF  M   G
Sbjct: 278 VGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEG 337

Query: 175 LELNEFSLTA---VLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  ++++   VLG     K G ++HGF +K+   S V   ++N+++++Y + G    
Sbjct: 338 MRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDV--FISNSLIDMYAKSGSSRI 395

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F+++   ++VSW+  IA         EA  L + ++      N  T  N+L +   
Sbjct: 396 ASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACAR 455

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK+I A   +VG    + + NAL  MY KCG +N A+++F+  + +D VS+N +
Sbjct: 456 LGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISV-RDEVSYNIL 514

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GYS      ++L +F  M    + P+  +   ++ A +N   ++Q  ++H  +++  F
Sbjct: 515 IIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLF 574

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + + L+  Y +C  ++ + +V   I  K+    N +            A+ L+  
Sbjct: 575 HTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEA 634

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     E +  +F  VL AC+    +E+G+    +      +      + ++D+  + G 
Sbjct: 635 MKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGL 694

Query: 529 IEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           +E+A    R   I  D+   W A++     HG       L+     F +KP    Y  +L
Sbjct: 695 MEEAADLIRGLSIIPDTNI-WGALLGACRIHGNIE--LGLWAAEHLFELKPQHCGYYILL 751

Query: 587 TS 588
           ++
Sbjct: 752 SN 753



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 27/309 (8%)

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYG 423
           F   L+ S  PN      +L+  +   +L Q  QVH++ +  GFL    S+ + LI  Y 
Sbjct: 28  FSTSLQTSNPPN------LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYA 81

Query: 424 KCNALNESKRVL--------SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
                + S  +         S       +  N++A V        +    Y T+  +  +
Sbjct: 82  SFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVF-------DGFGTYNTMVRAGVK 134

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T+  VLK C+   ++ +G+ +H +A K  +D D+FV + ++  Y  CG   DA + 
Sbjct: 135 PDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKV 194

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM--SKFGVKPDEITYLAVLTSCCHAG 593
           F ++       WN ++   + HG Y E    F  M  +K G++PD +T ++VL  C    
Sbjct: 195 FDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETE 254

Query: 594 LVREARTYLSCMSDLHGLI-PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
               AR  + C +   GL+   ++    +VD+ G+ G  + +K   D++    +   W +
Sbjct: 255 DKVMARI-VHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEID-ERNVISWNA 312

Query: 653 LLSACTIYG 661
           ++++ +  G
Sbjct: 313 IITSFSFRG 321


>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 206/592 (34%), Positives = 333/592 (56%), Gaps = 18/592 (3%)

Query: 170 MRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           MR L   L++ S TA+  AS +       H   +K G  + +  +  N I++ Y +CG+ 
Sbjct: 1   MRPLH-SLSQSSFTALYRASVN-------HCLAIKSGTTASI--YTANNIISGYAKCGEI 50

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A KMF E ++ D VSW+  IA   +      A    K ++   F ++ Y+  ++L  V
Sbjct: 51  RIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGV 110

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G+Q+ +   K+G+   V  G+AL+ MY KC +V DA  +F  +  ++SV+WN
Sbjct: 111 ACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWN 170

Query: 347 SMIAGYSENGFFNQALDMF-CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           ++I+GY++ G    A  +  C  LE   I +G T A +L  + +    K   QVH+ I+K
Sbjct: 171 ALISGYAQVGDRGTAFWLLDCMELEGVEIDDG-TFAPLLTLLDDPDLHKLTTQVHAKIVK 229

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLS-EIDKKNAVHI--NALASVLVYASCHAEA 462
            G   D ++ + +IT Y +C ++ +++RV    I+ ++  H+  N++ +    +    +A
Sbjct: 230 HGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDA 289

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L+ +  +      ++   FS VL++C+ +  L+ G+ +H L LK+ ++ + FV S++I M
Sbjct: 290 LKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFM 349

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG IEDA+++F    +DS   WN+++ GYAQHG      +LF  M    VK D IT+
Sbjct: 350 YSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 409

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +AVLT+C H GLV E  ++L  M   +G+ P++EHYAC++DLLGR G L+ AK  I+ MP
Sbjct: 410 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 469

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             PDA +W++LL AC   G+I+L     S LLEL+P+   TYVLLS+++     WN+   
Sbjct: 470 FEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKAS 529

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +++ MKE+ + K PG+SWI V      F A D SH   +EIY  L +L E +
Sbjct: 530 IKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEI 581



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 229/455 (50%), Gaps = 20/455 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L    + H + +K G ++ +Y  +  I  YAK GEI  A   F +    D V++  M+ 
Sbjct: 14  ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIA 73

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLS 209
           G+V  G F+ + E    M+  G  ++ +S  ++L        V+ G+Q+H   VK+G+  
Sbjct: 74  GFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKD 266
            V     +A++++Y +C +  DA ++F  I   + V+W+  I   A   D   AF L   
Sbjct: 134 NV--FAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +     +I++ T   LL+ +    + +   Q+ A   K G     ++ NA+I+ Y +CG 
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251

Query: 327 VNDARSIFDYLIFK---DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           + DA  +FD  I     D VSWNS++ G+S++G    AL  F +M    ++ + Y  +++
Sbjct: 252 IEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAV 311

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L + S+  +L+   QVH  ++KSGF  +  + S LI  Y KC  + ++++      K ++
Sbjct: 312 LRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSS 371

Query: 444 VHINALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +  N+L  +  YA  H     AL+L+  +     +++  TF  VL AC+ +  +E+G + 
Sbjct: 372 IAWNSL--IFGYAQ-HGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF 428

Query: 501 HCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
              ++++ Y     +E  + +ID+  + G +++AK
Sbjct: 429 -LKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAK 462



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 215/447 (48%), Gaps = 21/447 (4%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           L IK+G       +  +IS + K  + R A +   +T  RD +++N +I+G         
Sbjct: 24  LAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFET 83

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVK--AC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL+    ++  G   D ++F S++K  AC G ++  + VH + +K+G+   V+  S  ++
Sbjct: 84  ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLD 143

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YAK   +  A   F+     ++V + A++ GY   G+   +  +   M   G+E+++ +
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203

Query: 182 LTAVLGASFDV---KEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMF 236
              +L    D    K   Q+H   VK G  S   VC    NAI+  Y  CG   DA ++F
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC----NAIITAYSECGSIEDAERVF 259

Query: 237 D---EITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           D   E  + D VSW+  +   +  G+  +A   F+++R     I+ Y    +L S     
Sbjct: 260 DGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 319

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L+ G+Q+     K GF     + ++LI MY KCG + DAR  FD      S++WNS+I 
Sbjct: 320 TLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF 379

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+++G    ALD+F  M +  +  +  T  ++L A S+   +++        ++S + +
Sbjct: 380 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKS-MESDYGI 438

Query: 411 DDSM--ISCLITTYGKCNALNESKRVL 435
              M   +C+I   G+   L+E+K ++
Sbjct: 439 PPRMEHYACMIDLLGRAGRLDEAKALI 465



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 186/385 (48%), Gaps = 16/385 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S+++K G+  +    + L+  + K      AF        R+ +T+NALISG A+  
Sbjct: 121 QVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVG 180

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G A  L D +  +G+  D  TF+ L+        +++   VH   +K G +S   + +
Sbjct: 181 DRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240

Query: 118 GFIENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             I  Y++ G I  AE  F   +   DLD+V++ +++ G+  +G  + + + F  MRS  
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQY 300

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + ++ ++ +AVL +  D+     G+Q+H   +K GF       + ++++ +Y +CG   D
Sbjct: 301 VVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN--GFVASSLIFMYSKCGVIED 358

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K FD   +   ++W+  I   A    G  A  LF  ++    +++  T + +L++   
Sbjct: 359 ARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSH 418

Query: 289 ERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  G   +++     G    +     +I + G+ G++++A+++ + + F+ D++ W 
Sbjct: 419 IGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWK 478

Query: 347 SMIAGYSENGFFNQALDMFCHMLEF 371
           +++      G    A  +  H+LE 
Sbjct: 479 TLLGACRTCGDIELASQVASHLLEL 503


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 216/650 (33%), Positives = 345/650 (53%), Gaps = 19/650 (2%)

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           S  V L    +    KSG +  A   F      + VA+T+++ GY  NG  + +  +F +
Sbjct: 45  SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 170 MRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M   G+  N+F+  A L A  D+   + GEQ+H   V+ GF       + + ++ +Y RC
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAW--IGSCLIEMYSRC 162

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGVE----AFGLFKDLRFNDFQINEYTMINL 282
           G    A ++FD +  PDVV ++  I+A C   E    A  L + L+    + NE+TM  +
Sbjct: 163 GSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLK-QGLKPNEHTMTTI 221

Query: 283 LSSVGGERILRAGKQIQAFCYK-VGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           L++    R+L  G+QI  +  K +G   + V    ALI  Y + G+   A+++FD L  K
Sbjct: 222 LTAC--PRVL--GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCK 277

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW SM+  Y  +G   +AL +F  M+   + PN + ++ +L A     S+    Q+H
Sbjct: 278 NVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLH 334

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              IK   + D  + + L++ YG+   + E + +L++I+  + V      S         
Sbjct: 335 CSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGE 394

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +A+ L   +       NG  FS VL +CA +  L+QG   HCLALK   D +I   +A+I
Sbjct: 395 KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALI 454

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           +MY KCG +  A+ AF  +    +  WN+++ G+AQHG  ++   +F+KM   G+KPD+ 
Sbjct: 455 NMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDS 514

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+L VL  C H+G+V E   +   M D +   P   HYAC++D+LGR G  + A   I+ 
Sbjct: 515 TFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 574

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP  PDA IW++LL++C ++ N+D+G LA  +L+EL   + ++YVL+SN+YA  G W D 
Sbjct: 575 MPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDA 634

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            K+R+ M E  + K+ G SWI +    H F + D SH  S  IY+ L +L
Sbjct: 635 RKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 684



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 154/611 (25%), Positives = 273/611 (44%), Gaps = 54/611 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +L    ++   K      A         ++++ + +++SG  R  +   AL +F  + 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+ P+ F  ++ + AC   G+L+  E VH + ++ GF+   ++ S  IE Y++ G + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
           +A+  F      D V YT+++  +  NGEF+ + E  ++M   GL+ NE ++T +L A  
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            V  G+QIHG+ +K   L     + + A+++ Y R G+   A  +FD +   +VVSW   
Sbjct: 227 RVL-GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285

Query: 251 IAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           +     DG   EA  +F D+       NE+ +  +L + G    +  G+Q+     K   
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDL 342

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  + + NAL+SMYG+ G V +  ++ + +   D VSW + I+   +NGF  +A+ + C 
Sbjct: 343 ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ 402

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M      PNGY  +S+L + ++  SL Q MQ H   +K G   +    + LI  Y KC  
Sbjct: 403 MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQ 462

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  ++     +   +    N+L           +ALE++  +  +  + + STF  VL  
Sbjct: 463 MGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMG 522

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESA-----VIDMYCKCGTIEDAKRAFR----- 537
           C     +E+G+    L  +   DQ  F  +      +IDM  + G  ++A R        
Sbjct: 523 CNHSGMVEEGE----LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578

Query: 538 ----------------------KICRDSL--------AGWNAMMMGYAQHGCYHEVSNLF 567
                                 K+  D L        A +  M   YA HG + +   + 
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638

Query: 568 NKMSKFGVKPD 578
            +M + GVK D
Sbjct: 639 RRMDETGVKKD 649



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 241/468 (51%), Gaps = 21/468 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + LI  +++      A        + D++ Y +LIS    FC
Sbjct: 135 QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA---FC 191

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCL-KLGFSSR-VYL 115
           ++G    A +   ++  QGL+P+  T ++++ AC  +   +I HG  + K+G  S+ VY 
Sbjct: 192 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQI-HGYLIKKIGLRSQSVYS 250

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  I+ Y+++GE   A+  F D L   N V++ +M+  Y+ +G  +++ +VF +M S G
Sbjct: 251 STALIDFYSRNGEFKLAKAVF-DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ NEF+L+ VLGA   +  G Q+H   +K   ++ +   ++NA++++Y R G   +   
Sbjct: 310 VDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDI--RVSNALLSMYGRTGLVEELEA 367

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           M ++I  PD+VSW+  I+A      G +A  L   +    F  N Y   ++LSS      
Sbjct: 368 MLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G Q      K+G    +  GNALI+MY KCGQ+  AR  FD +   D  SWNS+I G
Sbjct: 428 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 487

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           ++++G  N+AL++F  M    + P+  T   +L   ++S  +++       +I    F  
Sbjct: 488 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 547

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
             S  +C+I   G+    +E+ R+++++        +AL    + ASC
Sbjct: 548 APSHYACMIDMLGRNGRFDEALRMINDM----PFEPDALIWKTLLASC 591


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 237/760 (31%), Positives = 382/760 (50%), Gaps = 47/760 (6%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
            ++   +K G   D  ++  L++ + KF   R A R LFD    RD++ +N ++      C
Sbjct: 782  LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREA-RVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGF----SSRV 113
                A+ LF      G RPD  T  +L   VK   ++ E +       KL       S V
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDV 900

Query: 114  YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
             + +  +  + + GE   A  CF D ++      + + C  +           FV M ++
Sbjct: 901  IVWNKALSRFLQRGEAWEAVDCFVDMIN------SRVACDGL----------TFVVMLTV 944

Query: 174  GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
               LN   L            G+QIHG  ++ G    V   + N ++N+YV+ G    A 
Sbjct: 945  VAGLNCLEL------------GKQIHGIVMRSGLDQVVS--VGNCLINMYVKAGSVSRAR 990

Query: 234  KMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLL---SSVG 287
             +F ++ E D++SW+  I+     G+E  + G+F  L  +    +++T+ ++L   SS+ 
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050

Query: 288  GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            G   L    QI A   K G +    +  ALI +Y K G++ +A  +F      D  SWN+
Sbjct: 1051 GGYYL--ATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNA 1108

Query: 348  MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
            ++ GY  +G F +AL ++  M E     +  T+ +  +A      LKQ  Q+H+ ++K G
Sbjct: 1109 IMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRG 1168

Query: 408  FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            F LD  + S ++  Y KC  +  ++RV SEI   + V    + S  V       AL  Y 
Sbjct: 1169 FNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYH 1228

Query: 468  TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
             +  S  + +  TF+ ++KAC+ +T LEQG+ IH   +K     D FV ++++DMY KCG
Sbjct: 1229 QMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCG 1288

Query: 528  TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
             IEDA+  F++     +A WNAM++G AQHG   E    F  M   GV PD +T++ VL+
Sbjct: 1289 NIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLS 1348

Query: 588  SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
            +C H+GLV EA      M   +G+ P++EHY+C+VD L R G +E A+  I  MP    A
Sbjct: 1349 ACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASA 1408

Query: 648  HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
             ++++LL+AC +  + + G     KLL L+P + + YVLLSN+YA+A  W +V   R  M
Sbjct: 1409 SMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMM 1468

Query: 708  KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            ++  + K+PG+SW+ +    H F AGD SH ++  IY ++
Sbjct: 1469 RKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1508



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 185/677 (27%), Positives = 319/677 (47%), Gaps = 48/677 (7%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ---NRDIITYNALISGLA 57
            + ++ ++ +GHH D  ++  LI+ + K      A R LFDT    NRD++T+NA++S LA
Sbjct: 677  RAHARILTSGHHPDRFVTNNLITMYAKCGSLSSA-RKLFDTTPDTNRDLVTWNAILSALA 735

Query: 58   RFC-QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
                +S     LF  LR   +     T + + K C    S   +E +HG  +K+G    V
Sbjct: 736  AHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDV 795

Query: 114  YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            ++    +  YAK G I  A + F      D V +  M+  YV      ++  +F E    
Sbjct: 796  FVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRT 855

Query: 174  GLELNEF---SLTAVLGASFDVKEGEQIHGFGVKVGFL---SGVCNHLNNAIMNLYVRCG 227
            G   ++    +L+ V+    ++ E +Q   +  K+ F+    G    + N  ++ +++ G
Sbjct: 856  GFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKL-FMYDDDGSDVIVWNKALSRFLQRG 914

Query: 228  QKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            +  +AV  F ++    V         ACDG+                   T + +L+ V 
Sbjct: 915  EAWEAVDCFVDMINSRV---------ACDGL-------------------TFVVMLTVVA 946

Query: 288  GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            G   L  GKQI     + G  +VVS+GN LI+MY K G V+ ARS+F  +   D +SWN+
Sbjct: 947  GLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNT 1006

Query: 348  MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVHSHIIKS 406
            MI+G + +G    ++ MF H+L  SL+P+ +T+AS+L A S+       A Q+H+  +K+
Sbjct: 1007 MISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKA 1066

Query: 407  GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            G +LD  + + LI  Y K   + E++ +    D  +    NA+    + +    +AL LY
Sbjct: 1067 GVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLY 1126

Query: 467  RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
              +  S    +  T     KA   +  L+QGK IH + +K  ++ D+FV S V+DMY KC
Sbjct: 1127 ILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKC 1186

Query: 527  GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
            G +E A+R F +I       W  M+ G  ++G        +++M    V+PDE T+  ++
Sbjct: 1187 GEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246

Query: 587  TSCCHAGLVREARTYLSCMSDLH-GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
             +C     + + R   + +  L+    P +     +VD+  + G +E A+    +     
Sbjct: 1247 KACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTRR 1304

Query: 646  DAHIWQSLLSACTIYGN 662
             A  W +++     +GN
Sbjct: 1305 IAS-WNAMIVGLAQHGN 1320



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 276/592 (46%), Gaps = 61/592 (10%)

Query: 1    QIYSLLIKNGHHLDPILSTT--LISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLA 57
            QI+ +++++G  LD ++S    LI+ + K     RA R +F   N  D+I++N +ISG  
Sbjct: 956  QIHGIVMRSG--LDQVVSVGNCLINMYVKAGSVSRA-RSVFGQMNEVDLISWNTMISGCT 1012

Query: 58   RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRV 113
                   ++ +F  L    L PD FT +S+++AC SL+        +H   +K G     
Sbjct: 1013 LSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDS 1072

Query: 114  YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            ++ +  I+ Y+K G++  AE  F +    D  ++ A++ GY+ +G+F K+  +++ M+  
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQES 1132

Query: 174  GLELNEFSL---TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            G   ++ +L       G    +K+G+QIH   VK GF   +   + + ++++Y++CG+  
Sbjct: 1133 GERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGF--NLDLFVTSGVLDMYLKCGEME 1190

Query: 231  DAVKMFDEITEPDVVSWSERIAAACD-GVEAFGLFK--DLRFNDFQINEYTMINLLSSVG 287
             A ++F EI  PD V+W+  I+   + G E   LF    +R +  Q +EYT   L+ +  
Sbjct: 1191 SARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACS 1250

Query: 288  GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                L  G+QI A   K+       +  +L+ MY KCG + DAR +F     +   SWN+
Sbjct: 1251 LLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNA 1310

Query: 348  MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS- 406
            MI G +++G   +AL  F +M    ++P+  T   +L A S+S  + +A +    + K+ 
Sbjct: 1311 MIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNY 1370

Query: 407  GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            G   +    SCL+    +   + E+++V+S      ++   A AS             +Y
Sbjct: 1371 GIEPEIEHYSCLVDALSRAGRIEEAEKVIS------SMPFEASAS-------------MY 1411

Query: 467  RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYC 524
            RT+               L AC    D E GK +    LAL+        + S V     
Sbjct: 1412 RTL---------------LNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAAN 1456

Query: 525  KCGTIEDAKRAFRKIC--RDSLAGW----NAMMMGYAQHGCYHEVSNLFNKM 570
            +   +  A+   RK+   +D    W    N + +  A    + E   ++NK+
Sbjct: 1457 QWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKV 1508



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 180/416 (43%), Gaps = 35/416 (8%)

Query: 180  FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            FS+     A+ D+  G++ H   +  G        + N ++ +Y +CG    A K+FD  
Sbjct: 660  FSILRQAIAASDLSLGKRAHARILTSGHHPD--RFVTNNLITMYAKCGSLSSARKLFDTT 717

Query: 240  --TEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
              T  D+V+W+  ++A    A    + F LF+ LR +      +T+  +           
Sbjct: 718  PDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPS 777

Query: 294  AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            A + +  +  K+G    V +  AL+++Y K G + +AR +FD +  +D V WN M+  Y 
Sbjct: 778  ASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYV 837

Query: 354  ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +     +A+ +F         P+  T+ ++   V   K++ +  Q  ++  K  F+ DD 
Sbjct: 838  DTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKL-FMYDD- 895

Query: 414  MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
                                     D  + +  N   S  +      EA++ +  +  S 
Sbjct: 896  -------------------------DGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 474  REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
               +G TF ++L   A +  LE GK IH + +++  DQ + V + +I+MY K G++  A+
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 534  RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
              F ++    L  WN M+ G    G       +F  + +  + PD+ T  +VL +C
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRAC 1046


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 223/710 (31%), Positives = 364/710 (51%), Gaps = 20/710 (2%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACG---SLQENEIVHGVCL 105
           N  I+ L +      A+K F+ L+ + G      T++ L+ AC    SL+  + +H   L
Sbjct: 31  NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K      + L +  +  Y K   +  A+  F    + + V++T+++ GY  NG+   + E
Sbjct: 91  KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150

Query: 166 VFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            + +M   G+  ++F+  +++ A     D+  G Q+H   +K  F + +     NA++++
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQ--NALISM 208

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQI-NEYT 278
           Y +    +DA+ +F  +   D++SW   IA        +EA   FK++      + NE+ 
Sbjct: 209 YTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFI 268

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
             ++ S+         G+Q+     K G    V  G +L  MY KCG ++ AR +F  + 
Sbjct: 269 FGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG 328

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
             D V+WN++IAG++  G   +A+  F  M    LIP+  T+ S+L A ++   L Q MQ
Sbjct: 329 RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ 388

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYAS 457
           VH +I K G  LD  + + L+T Y KC+ L ++     E+    + V  NA   +L    
Sbjct: 389 VHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNA---ILTACM 445

Query: 458 CHAEALELYRTIWGSC---REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
            H +A E++R +   C      +  T + VL A A    +E G  +HC ALK   + D  
Sbjct: 446 RHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTS 505

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V + +ID+Y KCG+++ A + F  +    +  W+++++GYAQ G   E   LF  M +  
Sbjct: 506 VTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD 565

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           VKP+ +T++ VLT+C H GLV E       M    G+ P  EH +C+VDLL R G L  A
Sbjct: 566 VKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEA 625

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
           +  I QM   PD  +W++LL+AC  +GN+D+G  A   +L++ P N + +VLL N+YAS 
Sbjct: 626 EGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASK 685

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           G W DV +LR  MK++ + K PG SWI V    H F+  DS H +  +IY
Sbjct: 686 GNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIY 735



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 293/629 (46%), Gaps = 61/629 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  ++K+  H D  L   +++ + K    + A +       R+++++ ++I+G ++  
Sbjct: 84  KIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNG 143

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q G AL+ + ++   G+ PD FTF S++KAC SL +      +H   LK  F + +   +
Sbjct: 144 QGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQN 203

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y KS  I+ A   F      D +++ +M+ G+   G   ++   F EM   G+ L
Sbjct: 204 ALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYL 263

Query: 178 -NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NEF   +V  A       + G Q+HG  +K G    V      ++ ++Y +CG    A 
Sbjct: 264 PNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDV--FAGCSLCDMYAKCGLLSCAR 321

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F +I  PD+V+W+  IA      D  EA   F  +R      +E T+ +LL +     
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
            L  G Q+  +  K+G    V + N L++MY KC ++ DA   F+ +    D VSWN+++
Sbjct: 382 ELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAIL 441

Query: 350 AGYSENGFFNQALDMFCHMLEFSLI----PNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
                +   +QA ++F  +L+   I    P+  T+ ++L A + + S++   QVH + +K
Sbjct: 442 TACMRH---DQAEEVF-RLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALK 497

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC--HAEAL 463
           +G   D S+ + LI  Y KC +L  + ++   +   + V  ++L  +L YA      EAL
Sbjct: 498 TGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSL--ILGYAQFGYGEEAL 555

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI---------------HC---LAL 505
           +L++T+     + N  TF  VL AC+ +  +E+G  +               HC   + L
Sbjct: 556 KLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDL 615

Query: 506 KAR---------------YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
            AR               +D DI V   ++      G ++  KRA   I +   +   A 
Sbjct: 616 LARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAH 675

Query: 551 MM---GYAQHGCYHEVSNLFNKMSKFGVK 576
           ++    YA  G + +V+ L + M + GV+
Sbjct: 676 VLLCNIYASKGNWEDVARLRSLMKQRGVR 704


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 229/754 (30%), Positives = 400/754 (53%), Gaps = 19/754 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISG--LAR 58
           ++S L+  G H DP  ST LI  +++    + + + +F+T QN D   +  LI     + 
Sbjct: 20  LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSS-KLVFETFQNPDSFMWAVLIKCHVWSN 78

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
           FC  G A+ L++++ Y+ +    F FSS+++AC   G+L   E VHG  +K G      +
Sbjct: 79  FC--GEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVV 136

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y   G + +A+  F +    D V++++++  YV NGE  +  E+F  + S  +
Sbjct: 137 ETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDV 196

Query: 176 ELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           EL+  ++ ++ GA  ++   +  + +HG  ++    +     LN+A++ +Y RC     A
Sbjct: 197 ELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETR--GPLNDALVLMYSRCDDFSSA 254

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F  +    + SW+  I+         +A  +F ++       N  T++ +LSS  G 
Sbjct: 255 ERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGF 314

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            +LR GK +  +  K   ++  S+G ALI  Y + G+++    +   +  ++ +SWN +I
Sbjct: 315 NLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLI 374

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y+  G F +AL +F  M     IP+ ++++S + A +N   L    Q+H + IK   +
Sbjct: 375 SVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKR-HI 433

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           LD+ + + LI  Y KC  ++ +  +   I  K+ V  N++           EA+ L+  +
Sbjct: 434 LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQM 493

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           + +C ++N  TF   ++AC+ M  LE+GK +H   +     +D+F+++A+IDMY KCG +
Sbjct: 494 YLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDL 553

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A R F  +   S+  W+AM+ G   HG      +LF +M +  +KP++IT++ +L++C
Sbjct: 554 RIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSAC 613

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+G V E + Y + M +   + P LEH+AC+VDLL R G L+ A   I+ MP P +A I
Sbjct: 614 SHSGYVEEGKFYFNSMKNFE-VEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASI 672

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL+ C I+  +D+       LL+++ D+   Y LLSN+YA  G W+   K+R  MK 
Sbjct: 673 WGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKG 732

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
             L K PGYS I +    + F AGD SH Q KEI
Sbjct: 733 IGLKKVPGYSTIELDKKVYRFGAGDVSHWQVKEI 766



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 306/615 (49%), Gaps = 17/615 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           +  L ++C SL+   ++H   L  G        +  IE+Y++ G + S+++ F    + D
Sbjct: 4   YMPLFRSCTSLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPD 63

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQI 198
           +  +  ++  +VW+    ++  ++ +M    + +++F  ++VL A     + DV  GE++
Sbjct: 64  SFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDV--GEEV 121

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG- 257
           HG  +K G    V + +  +++ +Y   G   +A K+FD +T  D+VSWS  I+   D  
Sbjct: 122 HGRIIKYGL--DVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNG 179

Query: 258 --VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              E   +F+ L   D +++  TM+++  + G    LR  K +     +        + +
Sbjct: 180 ESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLND 239

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           AL+ MY +C   + A  IF  +  +   SW +MI+ Y+ + +F QAL +F  MLEF + P
Sbjct: 240 ALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAP 299

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N  T+ ++L + +    L++   VH + +K   L DDS+   LI  Y +   L+  ++VL
Sbjct: 300 NAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVL 359

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
             I K+N +  N L SV        EAL ++  +    +  +  + S  + ACA +  L 
Sbjct: 360 HTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLW 419

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            G  IH  A+K R+  D FV++++IDMY KCG ++ A   F +I   S+  WN+M+ G++
Sbjct: 420 LGHQIHGYAIK-RHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFS 478

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           Q G   E   LF++M    +  +E+T+L  + +C H G + + + +L      +G+   L
Sbjct: 479 QIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGK-WLHHKLIAYGVKKDL 537

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKL 673
                ++D+  + G L  A    D M        W +++  C ++G+ID  + L A    
Sbjct: 538 FIDTALIDMYAKCGDLRIAHRVFDSMS-ERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQ 596

Query: 674 LELQPDNESTYVLLS 688
            E++P++ +   +LS
Sbjct: 597 REMKPNDITFMNILS 611



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 146/598 (24%), Positives = 284/598 (47%), Gaps = 15/598 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IK G  +D ++ T+L+  +        A +   +   RD+++++++IS      
Sbjct: 120 EVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNG 179

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           +S   L++F  L  Q +  D+ T  S+  ACG    L+  + VHG  ++    +R  L  
Sbjct: 180 ESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLND 239

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y++  +  SAE  F +  +    ++TAM+  Y  +  F ++ +VFVEM    +  
Sbjct: 240 ALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAP 299

Query: 178 NEFSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++ AVL   A F+ ++EG+ +H + VK   L    + L  A++  Y + G+     K
Sbjct: 300 NAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDD--DSLGPALIEYYAQFGKLSYCEK 357

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +   I + +++SW+  I+  A  G+  EA G+F  ++      + +++ + +S+     +
Sbjct: 358 VLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGL 417

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G QI  +  K   ++   + N+LI MY KCG V+ A  IFD +  K  V+WNSMI G
Sbjct: 418 LWLGHQIHGYAIKRHILDEF-VQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICG 476

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +S+ G   +A+ +F  M    L  N  T  + ++A S+   L++   +H  +I  G   D
Sbjct: 477 FSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKD 536

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI  Y KC  L  + RV   + +++ V  +A+            A+ L+  +  
Sbjct: 537 LFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQ 596

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + N  TF  +L AC+    +E+GK           + ++   + ++D+  + G +++
Sbjct: 597 REMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDE 656

Query: 532 AKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           A R    +   + A  W A++ G   H     + N+   +    ++ D+  Y  +L++
Sbjct: 657 AYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDL--LDMRTDDTGYYTLLSN 712


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 233/746 (31%), Positives = 376/746 (50%), Gaps = 26/746 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L + +G    P  +  L+S ++       A      +   D   +N+L+    R   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 62  SGPALKLFDRLRYQGLRPDAFT---FSSLVKACGSLQENEIVHGVCLKLGF---SSRVYL 115
               L    R+R  G RP  FT    +S     G+L     VH   ++ G       V +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLG 174
            S  +  YA+ G +  A   F +  + D VA+TA++ G V NG+  +     V M RS G
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 175 ---LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
                 N  ++ + L   G   ++  G  +HGFGVK G   G C  + +++ ++Y +C  
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGV--GHCPSVVSSLFSMYTKCDS 265

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA  +F E+ E D+VSW+  I A C      +A  LF  +  +  Q +E  +  LL+ 
Sbjct: 266 TEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAG 325

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           +G +  +R GK   A   +  F + V IGNALISMY KC QV+ A ++F  L  +D+ SW
Sbjct: 326 LGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSW 385

Query: 346 NSMIAGYSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           +SM+  Y + G   + L+++  M      EF    N  ++ SI+ + S    L+     H
Sbjct: 386 SSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTN--SLISIISSCSRLGRLRLGQSAH 443

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + IK     + S+ + LI+ YG+C   + ++++   +  K+ V  +AL S   +     
Sbjct: 444 CYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSK 503

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL LY  +     + N +T   V+ +CA +  LE G+ IH        + D+ + +A++
Sbjct: 504 DALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALV 563

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG +  A++ F  +    +  WN M+ GY  HG   +   LF+ M +  VKP+ +
Sbjct: 564 DMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSL 623

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+LA+L++CCHAGLV + R   + M + + L P L+HYAC+VDLLG+ G L+ A+  +  
Sbjct: 624 TFLAILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSA 682

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MPI PD  IW +LL AC ++ N ++GL    K     P+N+  Y+L+SN Y SA  WN++
Sbjct: 683 MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEI 742

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGY 726
            KLR  MK   + K  G+S I + G+
Sbjct: 743 EKLRDMMKNHGVEKSIGWSTIDICGF 768


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 184/539 (34%), Positives = 307/539 (56%), Gaps = 7/539 (1%)

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDF 272
           +N ++++Y +C + L A K+FD + E +VVSWS  ++      D   +  LF ++     
Sbjct: 415 SNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 474

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             NE+T    L + G    L  G QI  FC K+GF  +V +GN+L+ MY KCG++N+A  
Sbjct: 475 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 534

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI--PNGYTMASILEAVSNS 390
           +F  ++ +  +SWN+MIAG+   G+ ++ALD F  M E ++   P+ +T+ S+L+A S++
Sbjct: 535 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594

Query: 391 KSLKQAMQVHSHIIKSGFLLDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
             +    Q+H  +++SGF    S  +   L+  Y KC  L  +++   +I +K  +  ++
Sbjct: 595 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 654

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           L           EA+ L++ +     +++    S ++   A    L QGK +  LA+K  
Sbjct: 655 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 714

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
              +  V ++V+DMY KCG +++A++ F ++    +  W  ++ GY +HG   +   +F 
Sbjct: 715 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 774

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M +  ++PDE+ YLAVL++C H+G+++E     S + + HG+ P++EHYAC+VDLLGR 
Sbjct: 775 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 834

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L+ AK  ID MPI P+  IWQ+LLS C ++G+I+LG   G  LL +   N + YV++S
Sbjct: 835 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 894

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           NLY  AG WN+ G  R+    K L KE G SW+ +    H F +G+ SH  +  I + L
Sbjct: 895 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETL 953



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 242/446 (54%), Gaps = 12/446 (2%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L+ I S  LI  + K  +   A++       R++++++AL+SG         +L LF  +
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 73  RYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
             QG+ P+ FTFS+ +KACG   +L++   +HG CLK+GF   V + +  ++ Y+K G I
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--LNEFSLTAVLG 187
             AE  FR  +D   +++ AM+ G+V  G   K+ + F  M+   ++   +EF+LT++L 
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589

Query: 188 ASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A      +  G+QIHGF V+ GF       +  ++++LYV+CG    A K FD+I E  +
Sbjct: 590 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 649

Query: 245 VSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           +SWS  I   A   + VEA GLFK L+  + QI+ + + +++       +LR GKQ+QA 
Sbjct: 650 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K+      S+ N+++ MY KCG V++A   F  +  KD +SW  +I GY ++G   ++
Sbjct: 710 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLIT 420
           + +F  ML  ++ P+     ++L A S+S  +K+  ++ S ++++ G        +C++ 
Sbjct: 770 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHI 446
             G+   L E+K ++  +  K  V I
Sbjct: 830 LLGRAGRLKEAKHLIDTMPIKPNVGI 855



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 187/365 (51%), Gaps = 17/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   +K G  +   +  +L+  ++K      A +      +R +I++NA+I+G     
Sbjct: 499 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 558

Query: 61  QSGPALKLFDRLRYQGL--RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF--SSRV 113
               AL  F  ++   +  RPD FT +SL+KAC   G +   + +HG  ++ GF   S  
Sbjct: 559 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 618

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            +    ++ Y K G + SA   F    +   +++++++ GY   GEF ++  +F  ++ L
Sbjct: 619 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 678

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
             +++ F+L++++G   D   +++G+Q+    VK+   SG+   + N+++++Y++CG   
Sbjct: 679 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP--SGLETSVLNSVVDMYLKCGLVD 736

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A K F E+   DV+SW+  I        G ++  +F ++  ++ + +E   + +LS+  
Sbjct: 737 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 796

Query: 288 GERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-W 345
              +++ G+++ +   +  G    V     ++ + G+ G++ +A+ + D +  K +V  W
Sbjct: 797 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 856

Query: 346 NSMIA 350
            ++++
Sbjct: 857 QTLLS 861



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%)

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           ++   + +IDMYCKC     A + F  +   ++  W+A+M G+  +G      +LF++M 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 572 KFGVKPDEITYLAVLTSC 589
           + G+ P+E T+   L +C
Sbjct: 471 RQGIYPNEFTFSTNLKAC 488


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 201/597 (33%), Positives = 327/597 (54%), Gaps = 9/597 (1%)

Query: 167 FVEMRSLGLE--LNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           FV M S G    L  F SL  +  A  D+  G  +H      G  S        A+ N+Y
Sbjct: 47  FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEAL--AATALANMY 104

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGLFKDLRFNDFQ---INEYTM 279
            +C +  DA ++FD +   D V+W+  +A  A +G+    +   +R  + +    +  T+
Sbjct: 105 AKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITL 164

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           +++L +    R L A ++  AF  + G  E+V++  A++  Y KCG +  AR +FD++  
Sbjct: 165 VSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPT 224

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+SVSWN+MI GY++NG   +AL +F  M+E  +     ++ + L+A      L + M+V
Sbjct: 225 KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRV 284

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  +++ G   + S+++ LIT Y KC  ++ +  V  E+D++  V  NA+        C 
Sbjct: 285 HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCS 344

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            +A+ L+  +     + +  T   V+ A A ++D  Q + IH  +++   DQD++V +A+
Sbjct: 345 EDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTAL 404

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           IDMY KCG +  A+  F       +  WNAM+ GY  HG       LF +M   G+ P+E
Sbjct: 405 IDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNE 464

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+L+VL++C HAGLV E R Y + M + +GL P +EHY  +VDLLGR G L+ A   I 
Sbjct: 465 TTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQ 524

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +MP+ P   ++ ++L AC ++ N++L   +  K+ EL P     +VLL+N+YA+A MW D
Sbjct: 525 KMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKD 584

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           V ++R  M++  L K PG+S I +    H FY+G ++H Q+KEIY  L KL E + A
Sbjct: 585 VARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 242/537 (45%), Gaps = 18/537 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL  F  +   G  P   TF+SL+K C   G L     VH      G  S     +    
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEF 180
            YAK      A   F      D VA+ A+V GY  NG    + E+ V M+   G   +  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 181 SLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L +VL     +  +    + H F ++ G    V  ++  AI++ Y +CG    A  +FD
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELV--NVATAILDAYCKCGDIRAARVVFD 220

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   + VSW+  I   A   D  EA  LF  +      + + +++  L + G    L  
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G ++     ++G    VS+ NALI+MY KC +V+ A  +FD L  +  VSWN+MI G ++
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG    A+ +F  M   ++ P+ +T+ S++ A+++     QA  +H + I+     D  +
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           ++ LI  Y KC  +N ++ + +   +++ +  NA+            A+EL+  +     
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGI 460

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
             N +TF  VL AC+    +++G+  +  ++K  Y  +  +E    ++D+  + G +++A
Sbjct: 461 VPNETTFLSVLSACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 533 KRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
               +K+  D  L+ + AM+     H           K+ + G  P E  Y  +L +
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELG--PQEGVYHVLLAN 574



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 169/341 (49%), Gaps = 14/341 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           + ++  I++G      ++T ++  + K  D R A R +FD    ++ +++NA+I G A+ 
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIR-AARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
             S  AL LF+R+  +G+     +  + ++ACG L    E   VH + +++G  S V ++
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y+K   +  A   F +      V++ AM+ G   NG  + +  +F  M+   ++
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 177 LNEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+L +V+ A  D+ +  Q   IHG+ +++     V  ++  A++++Y +CG+   A 
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV--YVLTALIDMYAKCGRVNIAR 418

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+   E  V++W+  I        G  A  LF++++      NE T +++LS+     
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           ++  G++   +     G    +     ++ + G+ G++++A
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 214/672 (31%), Positives = 366/672 (54%), Gaps = 22/672 (3%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVW 156
           +H   LK G  S +Y+ + F+  YAK+  +  A   F D +   D D+V++ +++  +  
Sbjct: 33  LHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLF-DSINDNDKDDVSWNSLINAFSQ 91

Query: 157 NGEFDKSK---EVFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLS 209
           N     S     +F  M R+  +  N  +L  V  A+    DV  G+Q H   VK G   
Sbjct: 92  NHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSG 151

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGL 263
            V  ++ ++++N+Y + G   DA K+FD + E + VSW+  I+       A   VE F L
Sbjct: 152 DV--YVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFEL 209

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
            +  R  + Q NE+ + ++LS++  +  +  G+Q+ +   K G + +VS+ NAL++MY K
Sbjct: 210 MR--REEEIQ-NEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAK 266

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           CG ++DA   F++   K+S++W++M+ GY++ G  ++AL +F  M    ++P+ +T+  +
Sbjct: 267 CGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGV 326

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           + A S+  ++ +  Q+HS   K GF L   ++S ++  Y KC +L ++++    + + + 
Sbjct: 327 INACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDV 386

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           V   ++ +  V    +   L LY  +       N  T + VL+AC+++  L+QGK +H  
Sbjct: 387 VLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHAR 446

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
            +K  +  ++ + SA+  MY KCG+++D    F ++    +  WNAM+ G +Q+G  ++ 
Sbjct: 447 IIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKA 506

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
             LF KM   G+KPD +T++ +L++C H GLV     Y   M D   + P +EHYAC+VD
Sbjct: 507 LELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVD 566

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           +L R G L  AK  I+   +     +W+ LL AC  + N +LG+ AG KL+EL     S 
Sbjct: 567 ILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSA 626

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           YVLLS++Y + G   +V ++R+ MK + + KEPG SWI + G  H F  GD+ H Q  EI
Sbjct: 627 YVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEI 686

Query: 744 YKELIKLYEHMV 755
             EL  L + M+
Sbjct: 687 RLELELLTKLMI 698



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 173/345 (50%), Gaps = 12/345 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL IKNG      ++  L++ + K      A R    + +++ IT++A+++G A+  
Sbjct: 240 QVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGG 299

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
            S  ALKLF+++   G+ P  FT   ++ AC  L    E + +H    KLGF  ++Y++S
Sbjct: 300 DSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLS 359

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G +  A   F      D V +T+++ GYV NG+++    ++ +M+   +  
Sbjct: 360 AVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIP 419

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE ++ +VL A      + +G+Q+H   +K GF   V   + +A+  +Y +CG   D   
Sbjct: 420 NELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEV--PIGSALSAMYTKCGSLDDGYL 477

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   DV+SW+  I+       G +A  LF+ +     + +  T +NLLS+     +
Sbjct: 478 IFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGL 537

Query: 292 LRAGKQIQAFCY-KVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           +  G +     + +     +V     ++ +  + G++N+A+   +
Sbjct: 538 VDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIE 582



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 134/286 (46%), Gaps = 8/286 (2%)

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +++K++ +   +H+ I+K+G +    + +  +  Y K N L+ +  +   I+  +   ++
Sbjct: 22  THNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVS 81

Query: 448 ALASVLVYASCHAE-----ALELYRTIWGSCREV-NGSTFSIVLKACAAMTDLEQGKAIH 501
             + +  ++  H+      A+ L+R +  +   + N  T + V  A + ++D+  GK  H
Sbjct: 82  WNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAH 141

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
            +A+K     D++V S++++MYCK G + DA++ F ++   +   W  M+ GYA      
Sbjct: 142 SVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIAD 201

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           +   +F  M +     +E    +VL++      V   R   S ++  +GL+  +     +
Sbjct: 202 KAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS-LAIKNGLLAIVSVANAL 260

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           V +  + G L+ A  T  +     ++  W ++++     G+ D  L
Sbjct: 261 VTMYAKCGSLDDAVRTF-EFSGDKNSITWSAMVTGYAQGGDSDKAL 305


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 232/763 (30%), Positives = 386/763 (50%), Gaps = 22/763 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +I  G  LD  LS  LI+ +++      A +       R++++++ ++S       
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 62  SGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQENE-----IVHGVCLKLGFSSRVYL 115
              +L +F +  R +   P+ +  SS ++AC  L          +    +K GF   VY+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y K G I  A + F    +   V +T M+ G V  G    S ++F ++    +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245

Query: 176 ELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             + + L+ VL A     F ++ G+QIH   ++ G        L N +++ YV+CG+ + 
Sbjct: 246 VPDGYILSTVLSACSILPF-LEGGKQIHAHILRYGLEMDAS--LMNVLIDSYVKCGRVIA 302

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+F+ +   +++SW+  ++         EA  LF  +     + + Y   ++L+S   
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G Q+ A+  K        + N+LI MY KC  + DAR +FD     D V +N+M
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422

Query: 349 IAGYSENGF---FNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           I GYS  G     ++AL++F  M  F LI P+  T  S+L A ++  SL  + Q+H  + 
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G  LD    S LI  Y  C  L +S+ V  E+  K+ V  N++ +  V  S + EAL 
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +  S    +  TF+ ++ A   +  ++ G+  HC  LK   + + ++ +A++DMY 
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYA 601

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG+ EDA +AF       +  WN+++  YA HG   +   +  KM   G++P+ IT++ 
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVG 661

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL++C HAGLV +       M    G+ P+ EHY C+V LLGR G L  A+  I++MP  
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK 720

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P A +W+SLLS C   GN++L   A    +   P +  ++ +LSN+YAS GMW +  K+R
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + MK + + KEPG SWI +    H F + D SH ++ +IY+ L
Sbjct: 781 ERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVL 823



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 179/676 (26%), Positives = 307/676 (45%), Gaps = 58/676 (8%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L    +VHG  +  G     YL +  I  Y+++G +V A   F    + + V+++ MV  
Sbjct: 60  LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119

Query: 154 YVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKEGE------QIHGFGVKVG 206
              +G +++S  VF+E  R+     NE+ L++ + A   + +G       Q+  F VK G
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGRGRWMVFQLQSFLVKSG 178

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAF---GL 263
           F   V  ++   +++ Y++ G    A  +FD + E   V+W+  I+       ++    L
Sbjct: 179 FDRDV--YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           F  L  ++   + Y +  +LS+      L  GKQI A   + G     S+ N LI  Y K
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           CG+V  A  +F+ +  K+ +SW ++++GY +N    +A+++F  M +F L P+ Y  +SI
Sbjct: 297 CGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L + ++  +L    QVH++ IK+    D  + + LI  Y KC+ L ++++V       + 
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416

Query: 444 VHINALA---SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           V  NA+    S L       EAL ++R +       +  TF  +L+A A++T L   K I
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H L  K   + DIF  SA+ID+Y  C  ++D++  F ++    L  WN+M  GY Q    
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            E  NLF ++     +PDE T+  ++T+  +   V+  + +  C     GL         
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF-HCQLLKRGLECNPYITNA 595

Query: 621 IVDLLGRVGLLEGAKMTID---------------------------QM-------PIPPD 646
           ++D+  + G  E A    D                           QM        I P+
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLR 704
              +  +LSAC+  G ++ GL     +L   ++P+ E  YV + +L   AG  N      
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH-YVCMVSLLGRAGRLNKA---- 710

Query: 705 KEMKEKFLCKEPGYSW 720
           +E+ EK   K     W
Sbjct: 711 RELIEKMPTKPAAIVW 726



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 216/455 (47%), Gaps = 14/455 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +++ G  +D  L   LI  + K      A +      N++II++  L+SG  +  
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               A++LF  +   GL+PD +  SS++ +C SL        VH   +K    +  Y+ +
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG---EFDKSKEVFVEMRSLG 174
             I+ YAK   +  A   F      D V + AM+ GY   G   E  ++  +F +MR   
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  +  +  ++L AS  +      +QIHG   K G    +     +A++++Y  C    D
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI--FAGSALIDVYSNCYCLKD 507

Query: 232 AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           +  +FDE+   D+V W+   A      +  EA  LF +L+ +  + +E+T  N++++ G 
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              ++ G++      K G      I NAL+ MY KCG   DA   FD    +D V WNS+
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ Y+ +G   +AL M   M+   + PN  T   +L A S++  ++  ++    +++ G 
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI 687

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
             +     C+++  G+   LN+++ ++ ++  K A
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPA 722



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 12/218 (5%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F+ +L+  A+   L     +H   +    + D ++ + +I++Y + G +  A++ F K+ 
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV-KPDEITYLAVLTSCCHAGLVREAR 599
             +L  W+ M+     HG Y E   +F +  +     P+E    + + +C  +GL    R
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR 164

Query: 600 TYLSCMSDL---HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             +  +       G    +     ++D   + G ++ A++  D +P       W +++S 
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223

Query: 657 CTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYA 692
           C   G   + L    +L+E  + PD    Y+L + L A
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDG---YILSTVLSA 258


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 201/597 (33%), Positives = 327/597 (54%), Gaps = 9/597 (1%)

Query: 167 FVEMRSLGLE--LNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           FV M S G    L  F SL  +  A  D+  G  +H      G  S        A+ N+Y
Sbjct: 47  FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEAL--AATALANMY 104

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGLFKDLRFNDFQ---INEYTM 279
            +C +  DA ++FD +   D V+W+  +A  A +G+    +   +R  + +    +  T+
Sbjct: 105 AKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITL 164

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           +++L +    R L A ++  AF  + G  E+V++  A++  Y KCG +  AR +FD++  
Sbjct: 165 VSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPT 224

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+SVSWN+MI GY++NG   +AL +F  M+E  +     ++ + L+A      L + M+V
Sbjct: 225 KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRV 284

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  +++ G   + S+++ LIT Y KC  ++ +  V  E+D++  V  NA+        C 
Sbjct: 285 HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCS 344

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            +A+ L+  +     + +  T   V+ A A ++D  Q + IH  +++   DQD++V +A+
Sbjct: 345 EDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTAL 404

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           IDMY KCG +  A+  F       +  WNAM+ GY  HG       LF +M   G+ P+E
Sbjct: 405 IDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNE 464

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+L+VL++C HAGLV E R Y + M + +GL P +EHY  +VDLLGR G L+ A   I 
Sbjct: 465 TTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQ 524

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +MP+ P   ++ ++L AC ++ N++L   +  K+ EL P     +VLL+N+YA+A MW D
Sbjct: 525 KMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKD 584

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           V ++R  M++  L K PG+S I +    H FY+G ++H Q+KEIY  L KL E + A
Sbjct: 585 VARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 242/537 (45%), Gaps = 18/537 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL  F  +   G  P   TF+SL+K C   G L     VH      G  S     +    
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEF 180
            YAK      A   F      D VA+ A+V GY  NG    + E+ V M+   G   +  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 181 SLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L +VL     +  +    + H F ++ G    V  ++  AI++ Y +CG    A  +FD
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELV--NVATAILDAYCKCGDIRAARVVFD 220

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   + VSW+  I   A   D  EA  LF  +      + + +++  L + G    L  
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G ++     ++G    VS+ NALI+MY KC +V+ A  +FD L  +  VSWN+MI G ++
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG    A+ +F  M   ++ P+ +T+ S++ A+++     QA  +H + I+     D  +
Sbjct: 341 NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYV 400

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           ++ LI  Y KC  +N ++ + +   +++ +  NA+            A+EL+  +     
Sbjct: 401 LTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGI 460

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
             N +TF  VL AC+    +++G+  +  ++K  Y  +  +E    ++D+  + G +++A
Sbjct: 461 VPNETTFLSVLSACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 533 KRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
               +K+  D  L+ + AM+     H           K+ + G  P E  Y  +L +
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELG--PQEGVYHVLLAN 574



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 169/341 (49%), Gaps = 14/341 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           + ++  I++G      ++T ++  + K  D R A R +FD    ++ +++NA+I G A+ 
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIR-AARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
             S  AL LF+R+  +G+     +  + ++ACG L    E   VH + +++G  S V ++
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y+K   +  A   F +      V++ AM+ G   NG  + +  +F  M+   ++
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360

Query: 177 LNEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+L +V+ A  D+ +  Q   IHG+ +++     V  ++  A++++Y +CG+   A 
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV--YVLTALIDMYAKCGRVNIAR 418

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+   E  V++W+  I        G  A  LF++++      NE T +++LS+     
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           ++  G++   +     G    +     ++ + G+ G++++A
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 203/650 (31%), Positives = 349/650 (53%), Gaps = 8/650 (1%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LK G S  ++  +  +  Y +S  +  A   F +    + +++  +  GY  + +
Sbjct: 57  LHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQ 116

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLN 216
           F ++    + +   G E+N F  T +L    S D+      +H    K+G  +     + 
Sbjct: 117 FHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADA--FVG 174

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQ 273
            A+++ Y   G    A  +FD+I   D+VSW+  +A   +     E+  LF  +R   ++
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N +T+   L S  G      GK +     K  +   + +G AL+ +Y K G++ DA+ +
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL 294

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ +   D + W+ MIA Y+++    +ALD+F  M + S++PN +T AS+L+A ++S SL
Sbjct: 295 FEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSL 354

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               Q+HS ++K G   +  + + ++  Y KC  +  S ++  E+  +N V  N +    
Sbjct: 355 DLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGY 414

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V       A+ L+  +     +    T+S VL+A A++  LE G  IH L +K  Y++D 
Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDT 474

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            V +++IDMY KCG I DA+  F K+ +     WNAM+ GY+ HG   E  NLF+ M   
Sbjct: 475 VVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT 534

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
             KP+++T++ VL++C +AGL+ + + +   MS  + + P +EHY C+V LLGR+G  + 
Sbjct: 535 DCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDE 594

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           A   I ++   P   +W++LL AC I+  +DLG +    +LE++P +++T+VLLSN+YA+
Sbjct: 595 AMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYAT 654

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           AG W++V  +RK M++K + KEPG SW+   G  H+F  GD+SH   K I
Sbjct: 655 AGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLI 704



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 238/456 (52%), Gaps = 14/456 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ + K GHH D  + T LI  ++   +   A     D   +D++++  +++  A  C 
Sbjct: 158 LHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCF 217

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              +L+LF+++R  G +P+ FT S  +K+C  L+   +   VHG  LK  +   +++   
Sbjct: 218 YEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA 277

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +E YAKSGEI+ A+  F +    D + ++ M+  Y  +    ++ ++F+ MR   +  N
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+  +VL A   S  +  G+QIH   +K G  S V   ++NAIM++Y +CG+  +++K+
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNV--FVSNAIMDVYAKCGEIENSMKL 395

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+E+ + + V+W+  I       DG  A  LF  +  +D Q  E T  ++L +      L
Sbjct: 396 FEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAAL 455

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G QI +   K  + +   + N+LI MY KCG++NDAR  FD +  +D VSWN+MI GY
Sbjct: 456 EPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGY 515

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           S +G   +AL++F  M      PN  T   +L A SN+  L +  Q H   +   + +  
Sbjct: 516 SMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKP 574

Query: 413 SM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +   +C++   G+    +E+ +++ EI  + +V +
Sbjct: 575 CIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMV 610



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 181/361 (50%), Gaps = 13/361 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +K  +  D  +   L+  + K  +   A R   +    D+I ++ +I+  A+  +
Sbjct: 259 VHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDR 318

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           S  AL LF R+R   + P+ FTF+S+++AC S   L   + +H   LK G +S V++ + 
Sbjct: 319 SKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNA 378

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK GEI ++   F +  D ++V +  ++ GYV  G+ +++  +F  M    ++  
Sbjct: 379 IMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPT 438

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E + ++VL AS     ++ G QIH   +K  +       + N+++++Y +CG+  DA   
Sbjct: 439 EVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTV--VANSLIDMYAKCGRINDARLT 496

Query: 236 FDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD++ + D VSW+  I   +  G  +EA  LF  ++  D + N+ T + +LS+     +L
Sbjct: 497 FDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLL 556

Query: 293 RAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMIA 350
             G+   ++          +     ++ + G+ G+ ++A  +   + ++ SV  W +++ 
Sbjct: 557 YKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLG 616

Query: 351 G 351
            
Sbjct: 617 A 617



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 7/405 (1%)

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
           AGK +     K G    +   N L++ Y +   + DA  +FD +   +++S+ ++  GYS
Sbjct: 53  AGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYS 112

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +  F+QAL     + +     N +   ++L+ + +         +H+ + K G   D  
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + LI  Y     ++ ++ V  +I  K+ V    + +       + E+L+L+  +    
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            + N  T S  LK+C  +     GK++H  ALK  YD D+FV  A++++Y K G I DA+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           R F ++ +  L  W+ M+  YAQ     E  +LF +M +  V P+  T+ +VL +C  + 
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
            +   +   SC+    GL   +     I+D+  + G +E +    +++P   D   W ++
Sbjct: 353 SLDLGKQIHSCVLKF-GLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV-TWNTI 410

Query: 654 LSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGM 696
           +      G+ +  +   + +LE  +QP  E TY   S L ASA +
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLEHDMQP-TEVTYS--SVLRASASL 452



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++K G + +  +S  ++  + K  +   + +   +  +R+ +T+N +I G  +  
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ LF  +    ++P   T+SS+++A  SL   E    +H + +K  ++    + +
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  A + F      D V++ AM+CGY  +G   ++  +F  M+    + 
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKP 538

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+ +   VL A  +   + +G Q H   +   +    C      ++ L  R G+  +A+K
Sbjct: 539 NKLTFVGVLSACSNAGLLYKG-QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMK 597

Query: 235 MFDEIT-EPDVVSWSERIAA 253
           +  EI  +P V+ W   + A
Sbjct: 598 LIGEIAYQPSVMVWRALLGA 617


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 209/720 (29%), Positives = 382/720 (53%), Gaps = 17/720 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + T L+  + K      A +       +D+ ++NA+ISGL++      AL++F R++
Sbjct: 161 DVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQ 220

Query: 74  YQ-GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
            + G+ PD+ +  +L  A   L++ +    +HG  ++      V   +  I+ Y+K GE+
Sbjct: 221 MEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVS--NSLIDMYSKCGEV 278

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT-AVLGA 188
             A   F      D++++  M+ GYV +G + +  ++  EM+   +++N+ S+  +VL A
Sbjct: 279 KLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAA 338

Query: 189 S--FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           +   D+++G+++H + +++G  S +   +   I+++Y +CG+   A + F  +   D+V 
Sbjct: 339 TETRDLEKGKEVHNYALQLGMTSDIV--VATPIVSMYAKCGELKKAKEFFLSLEGRDLVV 396

Query: 247 WSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  ++A        EA  +F++++    + ++  + +L+S+       R GK +  +  
Sbjct: 397 WSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVI 456

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K      +S+   L+SMY +C     A ++F+ + +KD V+WN++I G+++ G    AL+
Sbjct: 457 KADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALE 516

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           MF  +    + P+  TM S+L A +    L   +  H +IIK+G   +  +   LI  Y 
Sbjct: 517 MFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYA 576

Query: 424 KCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           KC +L  ++  L  ++K  K+ V  N + +  ++  C  EA+  +  +       N  TF
Sbjct: 577 KCGSLCTAEN-LFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTF 635

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             +L A + ++ L +  A H   ++  +     + +++IDMY K G +  +++ F ++  
Sbjct: 636 VTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMEN 695

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                WNAM+ GYA HG       LF+ M +  V  D ++Y++VL++C HAGL++E R  
Sbjct: 696 KGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNI 755

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M++ H L P +EHYAC+VDLLG  GL +     ID+MP  PDA +W +LL AC ++ 
Sbjct: 756 FQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHS 815

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N+ LG +A   LL+L+P N   Y++LS++YA  G W D  + R  M +  L K PGYSW+
Sbjct: 816 NVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 170/684 (24%), Positives = 337/684 (49%), Gaps = 26/684 (3%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQENEIVH 101
           N  +I +N+LI   +R      A+K +  + Y GL PD +TF+ ++KAC G+L  +E   
Sbjct: 89  NPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHE--- 145

Query: 102 GVCLKLGFSSR-----VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
           GV +    +SR     V++ +G ++ Y K G + +A   F      D  ++ AM+ G   
Sbjct: 146 GVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQ 205

Query: 157 NGEFDKSKEVFVEMR-SLGLELNEFS---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVC 212
           +    ++ E+F  M+   G+E +  S   L   +    DV   + IHG+ V+      V 
Sbjct: 206 SSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVV- 264

Query: 213 NHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRF 269
              +N+++++Y +CG+   A ++FD++   D +SW+  +A         E   L  +++ 
Sbjct: 265 ---SNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKR 321

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              ++N+ +++N + +    R L  GK++  +  ++G    + +   ++SMY KCG++  
Sbjct: 322 KHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKK 381

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A+  F  L  +D V W++ ++   + G+  +AL +F  M    L P+   ++S++ A + 
Sbjct: 382 AKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAE 441

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
             S +    +H ++IK+    D S+ + L++ Y +C +   +  + + +  K+ V  N L
Sbjct: 442 ISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTL 501

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +          ALE++  +  S  + +  T   +L ACA + DL  G   H   +K   
Sbjct: 502 INGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGI 561

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           + ++ V+ A+IDMY KCG++  A+  F   K  +D ++ WN M+ GY  +GC +E  + F
Sbjct: 562 ESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVS-WNVMIAGYLHNGCANEAISTF 620

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           N+M    V+P+ +T++ +L +  +  ++REA  + +C+  + G I        ++D+  +
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRM-GFISSTLIGNSLIDMYAK 679

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ-PDNESTYVL 686
            G L  ++    +M        W ++LS   ++G  ++ L   S + E   P +  +Y+ 
Sbjct: 680 SGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYIS 738

Query: 687 LSNLYASAGMWNDVGKLRKEMKEK 710
           + +    AG+  +   + + M EK
Sbjct: 739 VLSACRHAGLIQEGRNIFQSMTEK 762



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 253/550 (46%), Gaps = 56/550 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++  ++ G   D +++T ++S + K  + ++A  F    + RD++ ++A +S L +  
Sbjct: 349 EVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAG 408

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVS 117
             G AL +F  ++++GL+PD    SSLV AC  +  +   +++H   +K    S + + +
Sbjct: 409 YPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVAT 468

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y +    + A   F      D VA+  ++ G+   G+   + E+F+ ++  G++ 
Sbjct: 469 TLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQP 528

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A     D+  G   HG  +K G  S +  H+  A++++Y +CG    A  
Sbjct: 529 DSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEM--HVKVALIDMYAKCGSLCTAEN 586

Query: 235 MFDEITE-PDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F       D VSW+  IA      C   EA   F  ++    + N  T + +L +V   
Sbjct: 587 LFHLNKHVKDEVSWNVMIAGYLHNGCAN-EAISTFNQMKLESVRPNLVTFVTILPAVSYL 645

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            ILR      A   ++GF+    IGN+LI MY K GQ++ +   F  +  K ++SWN+M+
Sbjct: 646 SILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAML 705

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY+ +G    AL +F  M E  +  +  +  S+L A  ++  +++   +   + +    
Sbjct: 706 SGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEK-HN 764

Query: 410 LDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           L+ SM   +C++   G     +E   VL  IDK                       E   
Sbjct: 765 LEPSMEHYACMVDLLGCAGLFDE---VLCLIDKMPT--------------------EPDA 801

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCK 525
            +WG+           +L AC   ++++ G+    H L L+ R      V S   D+Y +
Sbjct: 802 QVWGA-----------LLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLS---DIYAQ 847

Query: 526 CGTIEDAKRA 535
           CG   DA+R 
Sbjct: 848 CGRWIDARRT 857



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++    A   I   SL  WN+++  Y++   + E    +  MS  G++PD+ T+  VL +
Sbjct: 77  VQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKA 136

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           C  A    E    ++   D+     + + +    +VD+  ++G L+ A+   D+MP   D
Sbjct: 137 CTGALDFHEG---VAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMP-GKD 192

Query: 647 AHIWQSLLSACTIYGN 662
              W +++S  +   N
Sbjct: 193 VASWNAMISGLSQSSN 208


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 218/687 (31%), Positives = 358/687 (52%), Gaps = 11/687 (1%)

Query: 75  QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           Q  + +   F+SL  +C      + +H + +  G     ++    +  YA  G++  +  
Sbjct: 70  QPAKNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRG 129

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVLGASFDVK 193
            F      D   + +M+  YV NG F ++ + F ++  +   + + ++   VL A   + 
Sbjct: 130 TFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV 189

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G +IH +  K+GF   V   +  +++++Y R G    A  +FD++   D+ SW+  I+ 
Sbjct: 190 DGRKIHCWVFKLGFQWDV--FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISG 247

Query: 254 AC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                +  +A  +  ++R     ++  T+ ++L        +     I  +  K G    
Sbjct: 248 LIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFE 307

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + + NALI+MY K G + DA+ +F  +  +D VSWNS+IA Y +N     A   F  M  
Sbjct: 308 LFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL 367

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALN 429
             L P+  T+ S+    + S+  K +  VH  I++ G+L++  +I + ++  Y K   ++
Sbjct: 368 NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVID 427

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGSTFSIVLKA 487
            + +V + I  K+ V  N L S        +EA+E+YR +   CRE+  N  T+  +L A
Sbjct: 428 SAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMM-EECREIKLNQGTWVSILAA 486

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
            A +  L+QG  IH   +K     D+FV + +ID+Y KCG + DA   F ++ R+S   W
Sbjct: 487 YAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPW 546

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           NA++  +  HG   +   LF +M   GVKPD +T++++L++C H+GLV E + +   M +
Sbjct: 547 NAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE 606

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            +G+ P L+HY C+VDLLGR G LE A   I  MP+ PDA IW +LL AC I+GNI+LG 
Sbjct: 607 -YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGK 665

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
            A  +L E+  +N   YVLLSN+YA+ G W  V K+R   +E+ L K PG+S I V    
Sbjct: 666 FASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRV 725

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
             FY G+ SH + KEIY EL  L   M
Sbjct: 726 DIFYTGNQSHPKCKEIYAELRILTAKM 752



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 291/569 (51%), Gaps = 14/569 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++++LL+ +G      +S  L++ +    D   + R  FD  Q +D+ T+N++IS   R 
Sbjct: 94  RLHALLVVSGKIQSNFISIRLVNLYASLGDVSLS-RGTFDQIQRKDVYTWNSMISAYVRN 152

Query: 60  CQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
                A+  F + L     + D +TF  ++KAC +L +   +H    KLGF   V++ + 
Sbjct: 153 GHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAAS 212

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y++ G +  A   F D    D  ++ AM+ G + NG   ++ +V  EMR  G+ ++
Sbjct: 213 LIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMD 272

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++ ++L       D+     IH + +K G    +   ++NA++N+Y + G   DA K+
Sbjct: 273 SVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL--FVSNALINMYAKFGNLGDAQKV 330

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F ++   DVVSW+  IAA     D V A G F  ++ N  + +  T+++L S     R  
Sbjct: 331 FQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDY 390

Query: 293 RAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  + +  F  + G+ ME V IGNA++ MY K G ++ A  +F+ +  KD VSWN++I+G
Sbjct: 391 KNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISG 450

Query: 352 YSENGFFNQALDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           Y++NG  ++A++++  M E   I  N  T  SIL A ++  +L+Q M++H H+IK+   L
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + +CLI  YGKC  L ++  +  ++ ++++V  NA+ S         +AL+L+R + 
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQ 570

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
               + +  TF  +L AC+    +++GK    L  +      +     ++D+  + G +E
Sbjct: 571 DEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLE 630

Query: 531 DAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
            A    + +     A  W A++     HG
Sbjct: 631 MAYDFIKDMPLHPDASIWGALLGACRIHG 659


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 232/735 (31%), Positives = 378/735 (51%), Gaps = 51/735 (6%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
           A R LFD   R ++                  L  F   R  G+  D+ T S ++KAC S
Sbjct: 67  ANRVLFDYARRGMVP---------------EVLDQFSVARRGGVLVDSATLSCVLKACRS 111

Query: 94  LQEN---EIVHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
           + +    E +H +C+K G     V   +  ++ Y K G +      F      + V +T+
Sbjct: 112 VPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTS 171

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVK 204
           ++ G        +   +F  MR+ G+  N F+  +VL A     + D+  G+++H   VK
Sbjct: 172 LLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDL--GQRVHAQSVK 229

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEA 260
            G  S V   + N++MN+Y +CG   DA  +F+ +   D+VSW+  +A      C+ +EA
Sbjct: 230 FGCRSSV--FVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE-LEA 286

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             LF + R    ++ + T   ++      + L   +Q+ +   K GF    ++  AL   
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346

Query: 321 YGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           Y KCG++ DA +IF      ++ VSW ++I+G  +NG    A+ +F  M E  ++PN +T
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            +++L+A   S S+    Q+H+ +IK+ +    S+ + L+ +Y K  +  ++  +   I+
Sbjct: 407 YSAMLKA---SLSILPP-QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIE 462

Query: 440 KKNAVHINALASVLVYASCHAEALE------LYRTIWGSCREVNGSTFSIVLKACAAMT- 492
           +K+ V  +A+ S      CHA+A +      L+  +     + N  T S V+ ACA  + 
Sbjct: 463 QKDVVAWSAMLS------CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSA 516

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            ++QG+  H +++K RY   I V SA++ MY + G I+ A+  F +     L  WN+M+ 
Sbjct: 517 GVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMIS 576

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           GYAQHG   +    F +M   G++ D +T+LAV+  C H GLV E + Y   M   H + 
Sbjct: 577 GYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKIN 636

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P +EHYAC+VDL  R G L+     I  MP P  A +W++LL AC ++ N++LG  +  K
Sbjct: 637 PTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADK 696

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           LL L+P + STYVLLSN+YA+AG W +  ++RK M  + + KE G SWI +    H F A
Sbjct: 697 LLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIA 756

Query: 733 GDSSHSQSKEIYKEL 747
            D SH  S +IYK+L
Sbjct: 757 FDKSHPMSDQIYKKL 771



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 265/553 (47%), Gaps = 21/553 (3%)

Query: 1   QIYSLLIKNGHHLDPILS-TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q++ L +K GH    + + T+L+  + K                ++++T+ +L++G A  
Sbjct: 120 QLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHA 179

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                 + LF R+R +G+ P+ FTF+S++ A    G+L   + VH   +K G  S V++ 
Sbjct: 180 QMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVC 239

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK G +  A+  F      D V++  ++ G   N    ++ ++F E R+   +
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGK 299

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNAIMNLYVRCGQKLDA 232
           + + +   V+    ++K+     Q+H   +K GF L+G   ++  A+ + Y +CG+  DA
Sbjct: 300 MTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG---NVMTALADAYSKCGELADA 356

Query: 233 VKMFDEIT-EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           + +F   T   +VVSW+  I+      D   A  LF  +R +    NE+T   +L +   
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA--S 414

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             IL    QI A   K  +  + S+G AL++ Y K G   DA SIF  +  KD V+W++M
Sbjct: 415 LSIL--PPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS-NSKSLKQAMQVHSHIIKSG 407
           ++ +++ G    A  +F  M    + PN +T++S+++A +  S  + Q  Q H+  IK  
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           +     + S L++ Y +   ++ ++ V      ++ V  N++ S         +A+E +R
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKC 526
            +  S  +++G TF  V+  C     + +G+     +    + +  +   + ++D+Y + 
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRA 652

Query: 527 GTIEDAKRAFRKI 539
           G +++     R +
Sbjct: 653 GKLDETMSLIRDM 665



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 6/359 (1%)

Query: 330 ARSIFDYLIFKDS-VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           AR   D +  +D+ V  N ++  Y+  G   + LD F       ++ +  T++ +L+A  
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +        Q+H   +K G    + S  + L+  Y KC ++ E   V   + KKN V   
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           +L +   +A  H+E + L+  +       N  TF+ VL A A+   L+ G+ +H  ++K 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
                +FV +++++MY KCG +EDAK  F  +    +  WN +M G   + C  E   LF
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           ++      K  + TY  V+  C +   +  AR   SC+   HG          + D   +
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK-HGFHLTGNVMTALADAYSK 349

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTY 684
            G L  A           +   W +++S C   G+I L ++  S++ E  + P NE TY
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMP-NEFTY 407



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 128/249 (51%), Gaps = 8/249 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK  +   P + T L++ ++KF     A       + +D++ ++A++S  A+  
Sbjct: 421 QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAG 480

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
               A  LF+++  QG++P+ FT SS++ AC      + +    H + +K  +   + + 
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVS 540

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y++ G I SA++ F    D D V++ +M+ GY  +G   K+ E F +M + G++
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQ 600

Query: 177 LNEFSLTAV-LGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  +  AV +G + +  V EG+Q     V+   ++    H    +++LY R G+  + +
Sbjct: 601 MDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY-ACMVDLYSRAGKLDETM 659

Query: 234 KMFDEITEP 242
            +  ++  P
Sbjct: 660 SLIRDMPFP 668


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 198/607 (32%), Positives = 316/607 (52%), Gaps = 69/607 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N +++ Y + G      + FD++ + D VSW+  I    +  +   A  +  D+     +
Sbjct: 84  NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             ++T+ N+L+SV   R +  GK++ +F  K+G    VS+ N+L++MY KCG    A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203

Query: 334 FDYLIFKDS-------------------------------VSWNSMIAGYSENGFFNQAL 362
           FD ++ +D                                V+WNSMI+G+++ G+  +AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263

Query: 363 DMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           D+F  ML  SL+ P+ +T+AS+L A +N + L    Q+HSHI+ +GF +   +++ LI+ 
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323

Query: 422 YGKCNA---------------------------------LNESKRVLSEIDKKNAVHINA 448
           Y +C                                   +N++K +   +  ++ V   A
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +         + EA+ L+R++ G  +  N  T + +L   +++  L  GK IH  A+K+ 
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
               + V +A+I MY K G I  A RAF  I C      W +M++  AQHG   E   LF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M   G++PD ITY+ V ++C HAGLV + R Y   M D+  +IP L HYAC+VDL GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            GLL+ A+  I++MPI PD   W SLLSAC ++ NIDLG +A  +LL L+P+N   Y  L
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +NLY++ G W +  K+RK MK+  + KE G+SWI V    H F   D +H +  EIY  +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683

Query: 748 IKLYEHM 754
            K+++ +
Sbjct: 684 KKIWDEI 690



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/591 (24%), Positives = 252/591 (42%), Gaps = 122/591 (20%)

Query: 79  PDAFTFSSLVKACGSLQEN-----------EIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           P   + S+L++ C +L +            ++VH   +K G    VYL++  +  Y+K+G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 128 EIVSA-----EMCFRDCLDL--------------------------DNVAYTAMVCGYVW 156
             + A     EM  R                               D+V++T M+ GY  
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
            G++ K+  V  +M   G+E  +F+LT VL    A+  ++ G+++H F VK+G    V  
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS- 182

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA------------------AAC 255
            ++N+++N+Y +CG  + A  +FD +   D+ SW+  IA                  A  
Sbjct: 183 -VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241

Query: 256 DGV----------------EAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
           D V                 A  +F K LR +    + +T+ ++LS+      L  GKQI
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQV------------------------------- 327
            +     GF     + NALISMY +CG V                               
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361

Query: 328 --NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
             N A++IF  L  +D V+W +MI GY ++G + +A+++F  M+     PN YT+A++L 
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAV 444
             S+  SL    Q+H   +KSG +   S+ + LIT Y K   +  + R    I  +++ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              ++   L       EALEL+ T+       +  T+  V  AC     + QG+      
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR--QYFD 539

Query: 505 LKARYDQDIFVES---AVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           +    D+ I   S    ++D++ + G +++A+    K+     +  W +++
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 155/661 (23%), Positives = 277/661 (41%), Gaps = 130/661 (19%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           T++S ++K  D      F      RD +++  +I G     Q   A+++   +  +G+ P
Sbjct: 85  TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144

Query: 80  DAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
             FT +++   V A   ++  + VH   +KLG    V + +  +  YAK G+ + A+  F
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204

Query: 137 -----RDC---------------LDL-----------DNVAYTAMVCGYVWNGEFDKSKE 165
                RD                +DL           D V + +M+ G+   G   ++ +
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264

Query: 166 VFVEM-RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNAIM 220
           +F +M R   L  + F+L +VL A  ++++   G+QIH   V  GF +SG+   + NA++
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI---VLNALI 321

Query: 221 NLYVRCG-----QKL----------------------------DAVKMFDEITEPDVVSW 247
           ++Y RCG     ++L                             A  +F  + + DVV+W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381

Query: 248 SERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           +  I         G EA  LF+ +     + N YT+  +LS       L  GKQI     
Sbjct: 382 TAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQAL 362
           K G +  VS+ NALI+MY K G +  A   FD +   +D+VSW SMI   +++G   +AL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITT 421
           ++F  ML   L P+  T   +  A +++  + Q  Q    +     ++   S  +C++  
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           +G+   L E++  + ++                        +E     WGS         
Sbjct: 561 FGRAGLLQEAQEFIEKM-----------------------PIEPDVVTWGS--------- 588

Query: 482 SIVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
             +L AC    +++ GK A   L L    +   +  SA+ ++Y  CG  E+A +  RK  
Sbjct: 589 --LLSACRVHKNIDLGKVAAERLLLLEPENSGAY--SALANLYSACGKWEEAAK-IRKSM 643

Query: 541 RDSLA----GWNAMMMGYAQH------GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +D       G++ + + +  H      G + E + ++  M K   +  ++ Y+    S  
Sbjct: 644 KDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703

Query: 591 H 591
           H
Sbjct: 704 H 704



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 11/244 (4%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           T L+  + K  D  +A       ++RD++ + A+I G  +    G A+ LF  +   G R
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410

Query: 79  PDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P+++T +++     +  SL   + +HG  +K G    V + +  I  YAK+G I SA   
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470

Query: 136 FRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-- 191
           F D +  + D V++T+M+     +G  +++ E+F  M   GL  +  +   V  A     
Sbjct: 471 F-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529

Query: 192 -VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSE 249
            V +G Q       V  +    +H    +++L+ R G   +A +  +++  EPDVV+W  
Sbjct: 530 LVNQGRQYFDMMKDVDKIIPTLSHY-ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588

Query: 250 RIAA 253
            ++A
Sbjct: 589 LLSA 592



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 10/208 (4%)

Query: 473 CREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ----DIFVESAVIDMYCKCG 527
           CR + +G  FS+ L         + G A+H   L   +D+      F  + V+  Y K G
Sbjct: 38  CRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKL---FDEMPLRTAFSWNTVLSAYSKRG 94

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++     F ++ +     W  M++GY   G YH+   +   M K G++P + T   VL 
Sbjct: 95  DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           S      +   +   S +  L GL   +     ++++  + G    AK   D+M +  D 
Sbjct: 155 SVAATRCMETGKKVHSFIVKL-GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM-VVRDI 212

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLE 675
             W ++++     G +DL +    ++ E
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAE 240


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 233/745 (31%), Positives = 375/745 (50%), Gaps = 26/745 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L + +G    P  +  L+S ++       A      +   D   +N+L+    R   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 62  SGPALKLFDRLRYQGLRPDAFT---FSSLVKACGSLQENEIVHGVCLKLGF---SSRVYL 115
               L    R+R  G RP  FT    +S     G+L     VH   ++ G       V +
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLG 174
            S  +  YA+ G +  A   F +  + D VA+TA++ G V NG+  +     V M RS G
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 175 ---LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
                 N  ++ + L   G   ++  G  +HGFGVK G   G C  + +++ ++Y +C  
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGV--GHCPSVVSSLFSMYTKCDS 265

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA  +F E+ E D+VSW+  I A C      +A  LF  +  +  Q +E  +  LL+ 
Sbjct: 266 TEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAG 325

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           +G +  +R GK   A   +  F + V IGNALISMY KC QV+ A ++F  L  +D+ SW
Sbjct: 326 LGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSW 385

Query: 346 NSMIAGYSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           +SM+  Y + G   + L+++  M      EF    N  ++ SI+ + S    L+     H
Sbjct: 386 SSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTN--SLISIISSCSRLGRLRLGQSAH 443

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + IK     + S+ + LI+ YG+C   + ++++   +  K+ V  +AL S   +     
Sbjct: 444 CYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSK 503

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL LY  +     + N +T   V+ +CA +  LE G+ IH        + D+ + +A++
Sbjct: 504 DALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALV 563

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG +  A++ F  +    +  WN M+ GY  HG   +   LF+ M +  VKP+ +
Sbjct: 564 DMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSL 623

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+LA+L++CCHAGLV + R   + M + + L P L+HYAC+VDLLG+ G L+ A+  +  
Sbjct: 624 TFLAILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSA 682

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MPI PD  IW +LL AC ++ N ++GL    K     P+N+  Y+L+SN Y SA  WN++
Sbjct: 683 MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEI 742

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGG 725
            KLR  MK   + K  G+S I + G
Sbjct: 743 EKLRDMMKNHGVEKSIGWSTIDICG 767


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 197/631 (31%), Positives = 335/631 (53%), Gaps = 9/631 (1%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELN 178
           ++   K G++  A   F      D +++T ++ GYV   +  ++  +F  M    G + +
Sbjct: 64  LKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRD 123

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F ++  L A     ++  GE +HGF VK G +  V   +++A++++Y++ G+     ++
Sbjct: 124 QFMISVALKACALGVNICFGELLHGFSVKSGLIHSV--FVSSALIDMYMKVGKIEQGCRV 181

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+++   +VVSW+  IA    A   +E    F ++  +    + +T    L +     +L
Sbjct: 182 FEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLL 241

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK I     K GF E   + N L +MY KCG+ +    +F+ +   D VSW ++I+ Y
Sbjct: 242 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTY 301

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G    A++ F  M +  + PN YT A+++ + +N  + K   Q+H H+++ G +   
Sbjct: 302 VQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNAL 361

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + +IT Y KC  L  +  V   I +K+ +  + + SV        EA +    +   
Sbjct: 362 SVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRRE 421

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + N    S VL  C +M  LEQGK +H   L    D +  V SA+I MY KCG++++A
Sbjct: 422 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEA 481

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F  +  + +  W AM+ GYA+HG   E  NLF K+S  G+KPD + ++ VLT+C HA
Sbjct: 482 SKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHA 541

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G+V     Y   M++++ + P  EHY C++DLL R G L  A+  I  MP   D  +W +
Sbjct: 542 GMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWST 601

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL AC ++G++D G     +LL+L P++  T++ L+N+YA+ G W +   +RK MK K +
Sbjct: 602 LLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGV 661

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
            KE G+SW++V    + F AGD +H QS+ I
Sbjct: 662 IKERGWSWVNVNDQLNAFVAGDQAHPQSEHI 692



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 249/519 (47%), Gaps = 20/519 (3%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLR-YQGLRPDAFTFSSLVKACG- 92
           R++FD   +RD I++  LI+G      S  AL LF  +  + G + D F  S  +KAC  
Sbjct: 77  RYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACAL 136

Query: 93  --SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
             ++   E++HG  +K G    V++ S  I+ Y K G+I      F   +  + V++TA+
Sbjct: 137 GVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAI 196

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           + G V  G   +    F EM    +  +  +    L AS D   +  G+ IH   +K GF
Sbjct: 197 IAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGF 256

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLF 264
                + + N +  +Y +CG+    +++F+++  PDVVSW+  I+      E   A   F
Sbjct: 257 --DESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAF 314

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           K +R +    N+YT   ++SS       + G+QI     ++G +  +S+ N++I++Y KC
Sbjct: 315 KRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKC 374

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G +  A  +F  +  KD +SW+++I+ YS+ G+  +A D    M      PN + ++S+L
Sbjct: 375 GLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 434

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               +   L+Q  QVH+H++  G   +  + S +I+ Y KC ++ E+ ++ + +   + +
Sbjct: 435 SVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDII 494

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHC 502
              A+ +         EA+ L+  I     + +   F  VL AC  A M DL      + 
Sbjct: 495 SWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDL---GFYYF 551

Query: 503 LALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI 539
           + +   Y      E    +ID+ C+ G + +A+   R +
Sbjct: 552 MLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSM 590



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 195/398 (48%), Gaps = 11/398 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +K+G      +S+ LI  + K     +  R       R+++++ A+I+GL     
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGY 205

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           +   L  F  +    +  D+ TF+  +KA      L   + +H   +K GF    ++++ 
Sbjct: 206 NMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 265

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y K G+       F      D V++T ++  YV  GE + + E F  MR   +  N
Sbjct: 266 LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPN 325

Query: 179 EFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +++  AV+ +  ++   K GEQIHG  +++G ++ +   + N+I+ LY +CG    A  +
Sbjct: 326 KYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS--VANSIITLYSKCGLLKSASLV 383

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  IT  D++SWS  I+    G    EAF     +R    + NE+ + ++LS  G   +L
Sbjct: 384 FHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALL 443

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GKQ+ A    +G      + +A+ISMY KCG V +A  IF+ +   D +SW +MI GY
Sbjct: 444 EQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGY 503

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           +E+G+  +A+++F  +    L P+      +L A +++
Sbjct: 504 AEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHA 541



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 214/454 (47%), Gaps = 13/454 (2%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND 271
           LN+ +  L V+ GQ   A  MFD++T  D +SW+  IA    A D  EA  LF ++  + 
Sbjct: 60  LNSELKQL-VKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHP 118

Query: 272 FQINEYTMINL-LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
               +  MI++ L +      +  G+ +  F  K G +  V + +ALI MY K G++   
Sbjct: 119 GPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQG 178

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F+ ++ ++ VSW ++IAG    G+  + L  F  M    +  + +T A  L+A ++S
Sbjct: 179 CRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADS 238

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             L     +H+  IK GF     +I+ L T Y KC   +   R+  ++   + V    L 
Sbjct: 239 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLI 298

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S  V       A+E ++ +  S    N  TF+ V+ +CA +   + G+ IH   L+    
Sbjct: 299 STYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLV 358

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
             + V +++I +Y KCG ++ A   F  I R  +  W+ ++  Y+Q G   E  +  + M
Sbjct: 359 NALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWM 418

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREAR---TYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            + G KP+E    +VL+ C    L+ + +    +L C+    G+  +   ++ I+ +  +
Sbjct: 419 RREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCI----GIDHEAMVHSAIISMYSK 474

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            G ++ A    + M I  D   W ++++    +G
Sbjct: 475 CGSVQEASKIFNGMKI-NDIISWTAMINGYAEHG 507



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 173/364 (47%), Gaps = 23/364 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  IK G      +  TL + + K        R     +  D++++  LIS   +  +
Sbjct: 247 IHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGE 306

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              A++ F R+R   + P+ +TF++++ +C +L   +  E +HG  L+LG  + + + + 
Sbjct: 307 EEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANS 366

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y+K G + SA + F      D ++++ ++  Y   G   ++ +    MR  G + N
Sbjct: 367 IITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPN 426

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+L++VL   G+   +++G+Q+H   + +G       H  +AI+++Y +CG   +A K+
Sbjct: 427 EFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH--SAIISMYSKCGSVQEASKI 484

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ +   D++SW+  I    +     EA  LF+ +     + +    I +L++       
Sbjct: 485 FNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACN----- 539

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDARSIFDYLIF-KDSVSW 345
            AG     F Y +    V  I  +      LI +  + G++++A  I   + F  D V W
Sbjct: 540 HAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVW 599

Query: 346 NSMI 349
           ++++
Sbjct: 600 STLL 603



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 21/177 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+  G   + ++ + +IS ++K    + A +     +  DII++ A+I+G A   
Sbjct: 448 QVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHG 507

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGF-----SSRVYL 115
            S  A+ LF+++   GL+PD   F  ++ AC         H   + LGF      + VY 
Sbjct: 508 YSQEAINLFEKISSVGLKPDYVMFIGVLTACN--------HAGMVDLGFYYFMLMTNVYR 559

Query: 116 VSGFIENYA-------KSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSK 164
           +S   E+Y        ++G +  AE   R      D+V ++ ++     +G+ D+ +
Sbjct: 560 ISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGR 616


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 237/779 (30%), Positives = 403/779 (51%), Gaps = 55/779 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKF-ADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI+ LL K  + +D ++S  LIS + K       A R   D Q ++ +++N++IS  ++ 
Sbjct: 125 QIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQT 184

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVY 114
                A K+F  ++  G RP  +TF SLV    SL E ++     +     K GF + ++
Sbjct: 185 GDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLF 244

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-- 172
           + SG +  +AKSG ++ A   F      + V    ++ G V     +++ ++F++M S  
Sbjct: 245 VGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304

Query: 173 ---------LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
                    L     E+SL   +G    +K+G ++HG  +  G +  +   + N ++N+Y
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVG-IGNGLVNMY 359

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
            +CG   DA ++F  +TE D VSW+  I         +EA   ++ +R ++     +T+I
Sbjct: 360 AKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLI 419

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           + +SS    +  + G+QI     K+G    VS+ NAL+++Y + G +N+ R IF  +   
Sbjct: 420 SSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEH 479

Query: 341 DSVSWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           D VSWNS+I    S      +A+  F + L      N  T +S+L AVS+    +   Q+
Sbjct: 480 DQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASC 458
           H   +K     + +  + LI  YGKC  ++  +++ S + ++++ V  N++ S  ++   
Sbjct: 540 HGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNEL 599

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
            A+AL+L   +  + + ++   ++ VL A A++  LE+G  +H  +++A  + D+ V SA
Sbjct: 600 LAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKP 577
           ++DMY KCG ++ A R F           N M               LF  M   G   P
Sbjct: 660 LVDMYSKCGRLDYALRFF-----------NTM--------------PLFANMKLDGQTPP 694

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D +T++ VL++C HAGL+ E   +   MSD +GL P++EH++C+ DLLGR G L+  +  
Sbjct: 695 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDF 754

Query: 638 IDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           I++MP+ P+  IW+++L AC        +LG  A   L +L+P+N   YVLL N+YA+ G
Sbjct: 755 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 814

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            W D+ K RK+MK+  + KE GYSW+ +    H F AGD SH  +  IYK+L +L   M
Sbjct: 815 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 873



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 192/747 (25%), Positives = 352/747 (47%), Gaps = 44/747 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           +S L KNG   D  L   LI+ + +  D   A +   +   R+ +++  ++SG +R  + 
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVS 117
             AL     +  +G+  + + F S ++AC  L    I     +HG+  KL ++    + +
Sbjct: 84  KEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSN 143

Query: 118 GFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I  Y K  G +  A   F D    ++V++ +++  Y   G+   + ++F  M+  G  
Sbjct: 144 VLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSR 203

Query: 177 LNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             E++      TA      DV+  EQI     K GFL+ +   + + +++ + + G  + 
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDL--FVGSGLVSAFAKSGSLIH 261

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS--- 285
           A K+F+++   + V+ +  +        G EA  LF D+  +   ++  + + LLSS   
Sbjct: 262 ARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPE 320

Query: 286 --VGGERILRAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
             +  E  L+ G+++       G ++ +V IGN L++MY KCG + DAR +F ++  KDS
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDS 380

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWNSMI G  +N  F +A++ +  M    ++P  +T+ S + + ++ K  K   Q+H  
Sbjct: 381 VSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGE 440

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS-CHAE 461
            +K G  L+ S+ + L+T Y +   LNE +++ S + + + V  N++   L  +     E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE 500

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           A+  +     + +++N  TFS VL A ++++  E GK IH LALK     +   E+A+I 
Sbjct: 501 AVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIA 560

Query: 522 MYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
            Y KCG ++  ++ F ++   RD +  WN+M+ GY  +    +  +L   M + G + D 
Sbjct: 561 CYGKCGEMDGCEKIFSRMSERRDDVT-WNSMISGYIHNELLAKALDLVWFMMQTGQRLDS 619

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
             Y  VL++      +       +C S    L   +   + +VD+  + G L+ A    +
Sbjct: 620 FMYATVLSAFASVATLERGMEVHAC-SVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678

Query: 640 QMPI----------PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            MP+          PPD   +  +LSAC+  G ++ G     K  E   D+      + +
Sbjct: 679 TMPLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF----KHFESMSDSYGLAPRIEH 734

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEP 716
               A +    G+L K   E F+ K P
Sbjct: 735 FSCMADLLGRAGELDK--LEDFIEKMP 759



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 292/599 (48%), Gaps = 41/599 (6%)

Query: 86  SLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA-----EMCFRDC 139
           S V++C G     ++ H    K G    VYL +  I  Y ++G+ VSA     EM  R+C
Sbjct: 8   SFVQSCIGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKE 194
                V++  +V GY  NGE  ++     +M   G+  N ++  + L A     S  +  
Sbjct: 68  -----VSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILF 122

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIAA 253
           G QIHG   K+ +   V   ++N ++++Y +CG  L  A++ FD++   + VSW+  I+ 
Sbjct: 123 GRQIHGLLFKLSY--AVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISV 180

Query: 254 ---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG--ERILRAGKQIQAFCYKVGFM 308
                D   AF +F  ++ +  +  EYT  +L+++     E  +R  +QI     K GF+
Sbjct: 181 YSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFL 240

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + +G+ L+S + K G +  AR IF+ +  +++V+ N ++ G     +  +A  +F  M
Sbjct: 241 TDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300

Query: 369 LEF-SLIPNGYT--MASILE-AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC---LITT 421
                + P  Y   ++S  E +++    LK+  +VH H+I +G +  D M+     L+  
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV--DFMVGIGNGLVNM 358

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC ++ +++RV   + +K++V  N++ + L   SC  EA+E Y+++     E+   +F
Sbjct: 359 YAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSM--RRHEILPGSF 416

Query: 482 SIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +++  + +CA++   + G+ IH  +LK   D ++ V +A++ +Y + G + + ++ F  +
Sbjct: 417 TLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSM 476

Query: 540 CRDSLAGWNAMM--MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
                  WN+++  +  ++      V+   N + + G K + IT+ +VL++        E
Sbjct: 477 PEHDQVSWNSIIGALASSERSLPEAVACFLNAL-RAGQKLNRITFSSVLSAVSSLSF-GE 534

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
               +  ++  + +  +      ++   G+ G ++G +    +M    D   W S++S 
Sbjct: 535 LGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 593


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 309/561 (55%), Gaps = 7/561 (1%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G++IHGF +K G    V   + NA+M +Y  C     A  +FD++ E DVVSWS  I + 
Sbjct: 113 GKEIHGFVLKKGLDRDV--FVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSL 170

Query: 255 CDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME-- 309
               E   A  L +++ F   + +E  M+++++       +R GK + A+  +    E  
Sbjct: 171 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 230

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V    AL+ MY KCG +  AR +F+ L  K  VSW +MIAG   +    +   +F  M 
Sbjct: 231 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E ++ PN  TM S++     + +L+   Q+H++I+++GF +  ++ + L+  YGKC+ + 
Sbjct: 291 EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIR 350

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            ++ +      ++ +   A+ S    A+C  +A  L+  +  S       T   +L  CA
Sbjct: 351 NARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 410

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
               L+ GK +H    K R + D  + +A++DMY KCG I  A R F +     +  WNA
Sbjct: 411 VAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 470

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++ G+A HG   E  ++F +M + GVKP++IT++ +L +C HAGLV E +     M    
Sbjct: 471 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 530

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           GL+PQ+EHY C+VDLLGR GLL+ A   I  MPI P+  +W +L++AC ++ N  LG LA
Sbjct: 531 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 590

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
            ++LLE++P+N    VL+SN+YA+A  W+D   +RK MK   + KEPG+S I V G  H 
Sbjct: 591 ATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHE 650

Query: 730 FYAGDSSHSQSKEIYKELIKL 750
           F  GD SH Q + I + L ++
Sbjct: 651 FLMGDQSHPQIRRINEMLAEM 671



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 217/436 (49%), Gaps = 9/436 (2%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++L + G     + GK+I  F  K G    V +GNAL+ MYG+C  V  AR +FD ++ +
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D VSW++MI   S N  F+ AL++   M    + P+   M S++   +++ +++    +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 401 SHIIKSGF--LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +++I++     +     + L+  Y KC  L  ++++ + + +K  V   A+ +  + ++ 
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             E  +L+  +       N  T   ++  C     L+ GK +H   L+  +   + + +A
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++DMY KC  I +A+  F       +  W AM+  YAQ  C  +  NLF++M   GV+P 
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA-KMT 637
           ++T +++L+ C  AG +   +   S +      +  + + A +VD+  + G +  A ++ 
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA-LVDMYAKCGDINAAGRLF 457

Query: 638 IDQMPIPPDAHIWQSLLSACTI--YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           I+   I  D  +W ++++   +  YG   L + A  +   ++P N+ T++ L +  + AG
Sbjct: 458 IE--AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKP-NDITFIGLLHACSHAG 514

Query: 696 MWNDVGKLRKEMKEKF 711
           +  +  KL ++M   F
Sbjct: 515 LVTEGKKLFEKMVHTF 530



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/465 (23%), Positives = 223/465 (47%), Gaps = 17/465 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +I+  ++K G   D  +   L+  + + A    A R +FD    RD+++++ +I  L+R 
Sbjct: 115 EIHGFVLKKGLDRDVFVGNALMLMYGECACVEYA-RLVFDKMMERDVVSWSTMIRSLSRN 173

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSR--VY 114
            +   AL+L   + +  +RP      S+V       +++  + +H   ++   +    V 
Sbjct: 174 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVP 233

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             +  ++ YAK G +  A   F        V++TAM+ G + +   ++  ++F+ M+   
Sbjct: 234 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN 293

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  NE ++ +++   G +  ++ G+Q+H + ++ GF   V   L  A++++Y +C    +
Sbjct: 294 IFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF--SVSLALATALVDMYGKCSDIRN 351

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD     DV+ W+  ++A        +AF LF  +R +  +  + T+++LLS    
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK + ++  K        +  AL+ MY KCG +N A  +F   I +D   WN++
Sbjct: 412 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 471

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
           I G++ +G+  +ALD+F  M    + PN  T   +L A S++  + +  ++   ++ + G
Sbjct: 472 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG 531

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALAS 451
            +       C++   G+   L+E+  ++  +  K N +   AL +
Sbjct: 532 LVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 576



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 133/266 (50%), Gaps = 20/266 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q+++ +++NG  +   L+T L+  + K +D R A R LFD TQNRD++ + A++S  A+ 
Sbjct: 319 QLHAYILRNGFSVSLALATALVDMYGKCSDIRNA-RALFDSTQNRDVMIWTAMLSAYAQA 377

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                A  LFD++R  G+RP   T  SL+  C   G+L   + VH    K        L 
Sbjct: 378 NCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN 437

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK G+I +A   F + +  D   + A++ G+  +G  +++ ++F EM   G++
Sbjct: 438 TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 497

Query: 177 LNEFSLTAVLGASFD---VKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            N+ +   +L A      V EG++     +H FG+        C      +++L  R G 
Sbjct: 498 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC------MVDLLGRAGL 551

Query: 229 KLDAVKMFDEIT-EPDVVSWSERIAA 253
             +A +M   +  +P+ + W   +AA
Sbjct: 552 LDEAHEMIKSMPIKPNTIVWGALVAA 577


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 218/720 (30%), Positives = 364/720 (50%), Gaps = 56/720 (7%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
             +++ + K  + + A R       R+ ++ N LIS + R      AL  +D +   G+ 
Sbjct: 76  NAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVI 135

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P   TF+++  ACGSL + +     HGV +K+G  S +Y+V+  +  YAK G    A   
Sbjct: 136 PSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRV 195

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG----ASFD 191
           FRD  + + V +T M+ G     +  ++ E+F  M   G+ ++  SL+++LG       D
Sbjct: 196 FRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERD 255

Query: 192 V---------KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           V          +G+Q+H   VK+GF   +  HL N+++++Y + G    A K+F  +   
Sbjct: 256 VGPCHGISTNAQGKQMHTLSVKLGFERDL--HLCNSLLDMYAKIGDMDSAEKVFVNLNRH 313

Query: 243 DVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            VVSW+  IA     C+  +A    + ++ + ++ ++ T IN+L++              
Sbjct: 314 SVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTA-------------- 359

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
             C K                    G V   R IFD +      SWN++++GY++N    
Sbjct: 360 --CVK-------------------SGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHR 398

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A+++F  M      P+  T+A IL + +    L+   +VH+   K GF  D  + S LI
Sbjct: 399 EAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLI 458

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC  +  SK V S++ + + V  N++ +     S   +AL  ++ +       +  
Sbjct: 459 NVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEF 518

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +F+ V+ +CA ++ L QG+  H   +K  +  DIFV S++I+MYCKCG +  A+  F  +
Sbjct: 519 SFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVM 578

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
              +   WN M+ GYAQ+G  H    L+N M   G KPD+ITY+AVLT+C H+ LV E  
Sbjct: 579 PGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGL 638

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
              + M   +G++P++ HY CI+D L R G     ++ +D MP   DA +W+ +LS+C I
Sbjct: 639 EIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRI 698

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
           + N+ L   A  +L  L P N ++YVLL+N+Y+S G W+D   +R  M    + K+PGYS
Sbjct: 699 HANLSLAKRAAEELYRLDPQNSASYVLLANMYSSLGKWDDAHVVRDLMSHNQVRKDPGYS 758



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 162/659 (24%), Positives = 289/659 (43%), Gaps = 89/659 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           + + ++IK G   +  +   L+  + K      A R   D    + +T+  ++ GLA+  
Sbjct: 159 RTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTN 218

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN-------------EIVHGVCLKL 107
           Q   A +LF  +  +G+R D+ + SS++  C   + +             + +H + +KL
Sbjct: 219 QIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKL 278

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           GF   ++L +  ++ YAK G++ SAE  F +      V++  M+ GY      +K+ E  
Sbjct: 279 GFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYL 338

Query: 168 VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
             M+S G E ++ +   +L A   VK G+                           VR G
Sbjct: 339 QRMQSDGYEPDDVTYINMLTAC--VKSGD---------------------------VRTG 369

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
           +++     FD +  P + SW+  ++      D  EA  LF+ ++F     +  T+  +LS
Sbjct: 370 RQI-----FDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILS 424

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S      L AGK++ A   K GF + V + ++LI++Y KCG++  ++ +F  L   D V 
Sbjct: 425 SCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVC 484

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WNSM+AG+S N     AL  F  M +    P+ ++ A+++ + +   SL Q  Q H+ I+
Sbjct: 485 WNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIV 544

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K GFL D  + S LI  Y KC  +N ++     +  +N V  N +            AL 
Sbjct: 545 KDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALC 604

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           LY  +  S  + +  T+  VL AC+                 A  D+ + + +A++  Y 
Sbjct: 605 LYNDMISSGEKPDDITYVAVLTACSH---------------SALVDEGLEIFNAMLQKY- 648

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
             G +              +A +  ++   ++ G ++EV  + + M     K D + +  
Sbjct: 649 --GVVP------------KVAHYTCIIDCLSRAGRFNEVEVILDAMP---CKDDAVVWEV 691

Query: 585 VLTSC-CHAGLVREARTYLSCMSDLHGLIPQ-LEHYACIVDLLGRVGLLEGAKMTIDQM 641
           VL+SC  HA L    R       +L+ L PQ    Y  + ++   +G  + A +  D M
Sbjct: 692 VLSSCRIHANLSLAKRA----AEELYRLDPQNSASYVLLANMYSSLGKWDDAHVVRDLM 746



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 164/736 (22%), Positives = 310/736 (42%), Gaps = 142/736 (19%)

Query: 78  RPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA-- 132
           +  +   ++LV+ C + + +   ++VH    +L   S  +L + FIE Y+K   I SA  
Sbjct: 3   KSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACH 62

Query: 133 ----------------------------------EMCFRDCLDLDNVAYTAMVCGYVWNG 158
                                             +M  R+ + L+ +  T + CGY    
Sbjct: 63  VFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQA 122

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHL 215
             D    V ++    G+  +  +   V    G+  D   G + HG  +KVG  S +  ++
Sbjct: 123 -LDTYDSVMLD----GVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNI--YV 175

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER---IAAACDGVEAFGLFKDLRFNDF 272
            NA++ +Y +CG   DA+++F +I EP+ V+++     +A      EA  LF+ +     
Sbjct: 176 VNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGI 235

Query: 273 QINEYTMINLLSSVG-GERIL---------RAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
           +++  ++ ++L     GER +           GKQ+     K+GF   + + N+L+ MY 
Sbjct: 236 RVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYA 295

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
           K G ++ A  +F  L     VSWN MIAGY       +A +    M      P+  T  +
Sbjct: 296 KIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYIN 355

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L A   S  ++   Q+                 C+      C +L     +LS  ++  
Sbjct: 356 MLTACVKSGDVRTGRQI---------------FDCM-----PCPSLTSWNAILSGYNQN- 394

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
                         + H EA+EL+R +   C+  + +T +++L +CA +  LE GK +H 
Sbjct: 395 --------------ADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHA 440

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
            + K  +  D++V S++I++Y KCG +E +K  F K+    +  WN+M+ G++ +    +
Sbjct: 441 ASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQD 500

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGLVREARTYLSCMSDLHGLIPQLEHYACI 621
             + F KM + G  P E ++  V++SC   + L +  + +   + D  G +  +   + +
Sbjct: 501 ALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKD--GFLDDIFVGSSL 558

Query: 622 VDLLGRVGLLEGAKMTIDQMP----------------------------------IPPDA 647
           +++  + G + GA+   D MP                                    PD 
Sbjct: 559 IEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDD 618

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWNDVGKLR 704
             + ++L+AC+    +D GL   + +L+   + P   + Y  + +  + AG +N+V  + 
Sbjct: 619 ITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVP-KVAHYTCIIDCLSRAGRFNEVEVIL 677

Query: 705 KEMKEKFLCKEPGYSW 720
             M     CK+    W
Sbjct: 678 DAMP----CKDDAVVW 689


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 208/650 (32%), Positives = 367/650 (56%), Gaps = 23/650 (3%)

Query: 115 LVSGFIENYAKSGEIVSAEMCFRD-CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           + +  +  Y+K G + +A   F   C   D V++TAM      NG   +S  +  EM  L
Sbjct: 78  VANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLEL 137

Query: 174 GLELNEFSLTAVLGASFDVK----EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           GL  N F+L A   A F  +     G  + GF +K GF  G    +  A+++++ R G  
Sbjct: 138 GLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFW-GTDVSVGCALIDMFARNGDL 196

Query: 230 LDAVKMFDEITEPDVVSWS----ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           + A ++FD + E   V W+      + A C   +   LF  +  + F+ + Y+M +++S+
Sbjct: 197 VAAQRVFDGLIERTSVVWTLLITRYVQAGC-ASKVVELFLHMLDDGFEPDGYSMSSMISA 255

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG---QVNDARSIFDYLIFKDS 342
                 +R G+Q+ +   ++G +    +   L+ MY K      +  AR +F  +   + 
Sbjct: 256 CTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315

Query: 343 VSWNSMIAGYSENGFF-NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           +SW ++I+GY ++G   N  + +F  ML  S+ PN  T +++L+A +N        Q+H+
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHA 375

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA-LASVLVYASCHA 460
           H++K+     + + + L++ Y +   + E+++   ++ + N + ++  + +    ASC +
Sbjct: 376 HVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSS 435

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +       I G    V+  TF+ +L A A++  L +G+ +H L++KA +  D  + ++++
Sbjct: 436 K-------IEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLV 488

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY +CG +EDA RAF ++   ++  W +++ G A+HG   +  ++F+ M   GVKP+++
Sbjct: 489 SMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDV 548

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           TY+AVL++C H GLV+E + +   M   HGL+P++EHYACIVDLL R GL+E A+  I++
Sbjct: 549 TYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINE 608

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP   DA +W++LLSAC  YGN ++G +A + ++ L+P + + YVLLSNLYA AG+W++V
Sbjct: 609 MPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEV 668

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            ++R  M++K L KE G SW+ VG   H F AGD+SH  + +IY +L+ L
Sbjct: 669 ARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTL 718



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 279/565 (49%), Gaps = 30/565 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQ--NRDIITYNALISGLARFCQSGPALKLFDR 71
           D +++ +L++ ++K      A R +FD     RD++++ A+ S LAR      +L+L   
Sbjct: 75  DAVVANSLLTMYSKCGAVE-AARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGE 133

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQ----ENEIVHGVCLKLGF-SSRVYLVSGFIENYAKS 126
           +   GLRP+AFT  +  +AC   +       +V G  LK GF  + V +    I+ +A++
Sbjct: 134 MLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARN 193

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G++V+A+  F   ++  +V +T ++  YV  G   K  E+F+ M   G E + +S+++++
Sbjct: 194 GDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMI 253

Query: 187 GASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD---AVKMFDEIT 240
            A  +   V+ G+Q+H   +++G +S  C  ++  ++++Y +   +     A K+F  + 
Sbjct: 254 SACTELGSVRLGQQLHSVALRLGLVSDSC--VSCGLVDMYAKLKMERSMEHARKVFKTMP 311

Query: 241 EPDVVSWSERIAAACD-GVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
             +V+SW+  I+     GV+      LF+++     + N  T  NLL +        +G+
Sbjct: 312 RHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGR 371

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           QI A   K     V  +GNAL+SMY + G + +AR  FD L   + +S +  +     N 
Sbjct: 372 QIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNA 431

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
             +  ++     +      + +T AS+L A ++   L +  ++H+  +K+GF  D  + +
Sbjct: 432 SCSSKIEGMDDGV------STFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISN 485

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ Y +C  L ++ R   E+   N +   ++ S L       +AL ++  +  +  + 
Sbjct: 486 SLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKP 545

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
           N  T+  VL AC+ +  +++GK  H  +++  +     +E  + ++D+  + G +E+A++
Sbjct: 546 NDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQ 604

Query: 535 AFRKI-CRDSLAGWNAMMMGYAQHG 558
              ++ C+     W  ++     +G
Sbjct: 605 FINEMPCKADALVWKTLLSACRTYG 629



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 135/345 (39%), Gaps = 61/345 (17%)

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
           H+N L + LV +S H            SC          +L + A   DL  G+A+H   
Sbjct: 25  HLNPLTAHLVLSSDH------------SCDAAK------LLTSAARAGDLRLGRALHRRL 66

Query: 505 LKAR-YDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYH 561
           L++   D D  V ++++ MY KCG +E A+R F ++C  RD L  W AM    A++G   
Sbjct: 67  LRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRD-LVSWTAMASCLARNGAER 125

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC- 620
           E   L  +M + G++P+  T  A   +C    L R A   +       G         C 
Sbjct: 126 ESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCA 185

Query: 621 IVDLLGRVGLLEGAKMTIDQM----------------------------------PIPPD 646
           ++D+  R G L  A+   D +                                     PD
Sbjct: 186 LIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL-LSNLYASAGMWNDVGKLRK 705
            +   S++SACT  G++ LG    S  L L   ++S     L ++YA   M   +   RK
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARK 305

Query: 706 EMKEKFLCKEPGYSWIH-VGGYTHHFYAGDSSHSQSKEIYKELIK 749
             K   + +    SW   + GY       ++  +  +E+  E I+
Sbjct: 306 VFKT--MPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIR 348



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 53/91 (58%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L +K G   D  +S +L+S + +      A R   + ++ ++I++ ++ISGLA+  
Sbjct: 467 KLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHG 526

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL +F  +   G++P+  T+ +++ AC
Sbjct: 527 YAKQALSMFHDMILAGVKPNDVTYIAVLSAC 557


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 230/747 (30%), Positives = 377/747 (50%), Gaps = 34/747 (4%)

Query: 16  ILSTTLISHFT-KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           IL+ TL S +T KF   RR          R I  ++A         +S P    +     
Sbjct: 75  ILAPTLKSRYTSKFLPPRR----------RPIQLFSA--------ARSSPQFSSYGL--- 113

Query: 75  QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
            G + +   F+ L  +       + +H + +  G    +++ +  +  YA  G++  +  
Sbjct: 114 -GNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRC 172

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGASFDVK 193
            F      D  A+ +M+  YV NG F ++   F ++  +  +  + ++   VL A   + 
Sbjct: 173 TFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV 232

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G +IH +  K+GF   V   +  +++++Y R G    A  +FD++   D+ SW+  I+ 
Sbjct: 233 DGRKIHCWAFKLGFQWNV--FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290

Query: 254 AC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                +  +A  +  ++R    ++N  T++++L        +     I  +  K G    
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + + NALI+MY K G + DAR  F  +   D VSWNS+IA Y +N     A   F  M  
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALN 429
               P+  T+ S+   V+ S+  K +  VH  I++ G+L++D +I + ++  Y K   L+
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGSTFSIVLKA 487
            + +V   I  K+ +  N L +        +EA+E+Y+ +   C+E+  N  T+  +L A
Sbjct: 471 SAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMM-EECKEIIPNQGTWVSILPA 529

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
            A +  L+QG  IH   +K     D+FV + +ID+Y KCG + DA   F ++ ++S   W
Sbjct: 530 YAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTW 589

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           NA++  +  HG   +   LF +M   GVKPD +T++++L++C H+G V E +     M +
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            +G+ P L+HY C+VDLLGR G LE A   I  MP+ PDA IW +LL AC I+GNI+LG 
Sbjct: 650 -YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGK 708

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
            A  +L E+   N   YVLLSN+YA+ G W  V K+R   +E+ L K PG+S I V    
Sbjct: 709 FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKV 768

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
             FY G+ SH + KEIY+EL  L   M
Sbjct: 769 DVFYTGNQSHPKCKEIYEELRVLTAKM 795



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 165/570 (28%), Positives = 291/570 (51%), Gaps = 18/570 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           +++LL+  G      +ST L++ +    D   + R  FD    +D+  +N++IS      
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLS-RCTFDQIPQKDVYAWNSMISAYVHNG 196

Query: 61  QSGPALKLFDRLRY-QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
               A+  F +L     +RPD +TF  ++KACG+L +   +H    KLGF   V++ +  
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASL 256

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y++ G    A   F D    D  ++ AM+ G + NG   ++ +V  EMR  G+++N 
Sbjct: 257 IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNF 316

Query: 180 FSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++ ++L       D+     IH + +K G    +   ++NA++N+Y + G   DA K F
Sbjct: 317 VTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL--FVSNALINMYAKFGNLEDARKAF 374

Query: 237 DEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            ++   DVVSW+  IAA     D V A G F  ++ N FQ +  T+++L S V   R  +
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 294 AGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             + +  F  + G+ ME V IGNA++ MY K G ++ A  +F+ +  KD +SWN++I GY
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494

Query: 353 SENGFFNQALDMFCHMLE-FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++NG  ++A++++  M E   +IPN  T  SIL A ++  +L+Q M++H  +IK+   LD
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 554

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + +CLI  YGKC  L ++  +  ++ ++++V  NA+ S         + L+L+  +  
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
              + +  TF  +L AC+    +E+GK   C  L   Y     ++    ++D+  + G +
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGKW--CFRLMQEYGIKPSLKHYGCMVDLLGRAGYL 672

Query: 530 EDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           E A    + +     A  W A++     HG
Sbjct: 673 EMAYDFIKDMPLQPDASIWGALLGACRIHG 702



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 215/441 (48%), Gaps = 17/441 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+    K G   +  ++ +LI  +++F  F    R LFD    RD+ ++NA+ISGL + 
Sbjct: 236 KIHCWAFKLGFQWNVFVAASLIHMYSRFG-FTGIARSLFDDMPFRDMGSWNAMISGLIQN 294

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             +  AL + D +R +G++ +  T  S++  C   G +    ++H   +K G    +++ 
Sbjct: 295 GNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVS 354

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  YAK G +  A   F+     D V++ +++  Y  N +   +   FV+M+  G +
Sbjct: 355 NALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQ 414

Query: 177 ---LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              L   SL +++  S D K    +HGF ++ G+L      + NA++++Y + G    A 
Sbjct: 415 PDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV-IGNAVVDMYAKLGLLDSAH 473

Query: 234 KMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           K+F+ I   DV+SW+  I        A + +E + + ++ +  +   N+ T +++L +  
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK--EIIPNQGTWVSILPAYA 531

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L+ G +I     K      V +   LI +YGKCG++ DA S+F  +  + SV+WN+
Sbjct: 532 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 591

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I+ +  +G   + L +F  ML+  + P+  T  S+L A S+S  +++       + + G
Sbjct: 592 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYG 651

Query: 408 FLLDDSMISCLITTYGKCNAL 428
                    C++   G+   L
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYL 672


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 212/673 (31%), Positives = 362/673 (53%), Gaps = 15/673 (2%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
            Q+  + H   +K G  S +Y+ +  +++Y K G +  A M F +    D+V++  M+ G
Sbjct: 16  FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSG 210
           Y   G+ + +  +F  M+  G +++ +S + +L     VK    GEQ+HG  +K G+   
Sbjct: 76  YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY--- 132

Query: 211 VCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKD 266
            CN ++ ++++++Y +C +  DA + F EI+EP+ VSW+  IA      D   AF L   
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192

Query: 267 LRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           +       ++  T   LL+ +         KQ+ A   K+G    ++I NA+IS Y  CG
Sbjct: 193 MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252

Query: 326 QVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
            V+DA+ +FD L   KD +SWNSMIAG+S++     A ++F  M    +  + YT   +L
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLL 312

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK--CNALNESKRVLSEIDKKN 442
            A S  +       +H  +IK G     S  + LI+ Y +     + ++  +   +  K+
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +  N++ +         +A++ +  +  S  +V+   FS +L++C+ +  L+ G+ IH 
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYH 561
           LA K+ +  + FV S++I MY KCG IE A++ F++I  + S   WNAM++GYAQHG   
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
              +LF++M    VK D +T+ A+LT+C H GL++E    L+ M  ++ + P++EHYA  
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           VDLLGR GL+  AK  I+ MP+ PD  + ++ L  C   G I++     + LLE++P++ 
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSK 741
            TYV LS++Y+    W +   ++K MKE+ + K PG+SWI +      F A D S+   +
Sbjct: 613 FTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQ 672

Query: 742 EIYKELIKLYEHM 754
           +IY  +  L + M
Sbjct: 673 DIYMMIKDLTQEM 685



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 273/549 (49%), Gaps = 29/549 (5%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G   D  +S  ++  + KF     A     +   RD +++N +ISG     +   A 
Sbjct: 27  IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW 86

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENY 123
            LF  ++  G   D ++FS L+K   S++     E VHG+ +K G+   VY+ S  ++ Y
Sbjct: 87  CLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-----VEMR-SLGLEL 177
           AK   +  A   F++  + ++V++ A++ G+V   +    K  F     +EM+ ++ ++ 
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFV---QVRDIKTAFWLLGLMEMKAAVTMDA 203

Query: 178 NEFS-LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
             F+ L  +L         +Q+H   +K+G    +   + NA+++ Y  CG   DA ++F
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT--ICNAMISSYADCGSVSDAKRVF 261

Query: 237 DEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           D +    D++SW+  IA          AF LF  ++ +  + + YT   LLS+  GE   
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGK--CGQVNDARSIFDYLIFKDSVSWNSMIA 350
             GK +     K G  +V S  NALISMY +   G + DA S+F+ L  KD +SWNS+I 
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+++ G    A+  F ++    +  + Y  +++L + S+  +L+   Q+H+   KSGF+ 
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 441

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNA-VHINALASVLVYAS--CHAEALELYR 467
           ++ +IS LI  Y KC  +  +++   +I  K++ V  NA+  +L YA       +L+L+ 
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM--ILGYAQHGLGQVSLDLFS 499

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +     +++  TF+ +L AC+    +++G  +  L ++  Y     +E  +A +D+  +
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL-MEPVYKIQPRMEHYAAAVDLLGR 558

Query: 526 CGTIEDAKR 534
            G +  AK 
Sbjct: 559 AGLVNKAKE 567



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 210/417 (50%), Gaps = 24/417 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+IK G+  +  + ++L+  + K      AF    +    + +++NALI+G  +  
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVR 181

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKA------CGSLQENEIVHGVCLKLGFSSRV 113
               A  L   +  +  +  DA TF+ L+        C  L++   VH   LKLG    +
Sbjct: 182 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEI 238

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            + +  I +YA  G +  A+  F D L    D +++ +M+ G+  +   + + E+F++M+
Sbjct: 239 TICNAMISSYADCGSVSDAKRVF-DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 297

Query: 172 SLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR--C 226
              +E + ++ T +L A    +    G+ +HG  +K G          NA++++Y++   
Sbjct: 298 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ--VTSATNALISMYIQFPT 355

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLL 283
           G   DA+ +F+ +   D++SW+  I   A  G+  +A   F  LR ++ ++++Y    LL
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 415

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS- 342
            S      L+ G+QI A   K GF+    + ++LI MY KCG +  AR  F  +  K S 
Sbjct: 416 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 475

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           V+WN+MI GY+++G    +LD+F  M   ++  +  T  +IL A S++  +++ +++
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 206/609 (33%), Positives = 340/609 (55%), Gaps = 15/609 (2%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD----VKEGEQIHGFGVKVGFLSGVC 212
           +G+F  S  +F +M S G+E++ ++ + V   SF     V  GEQ+HGF +K GF  G  
Sbjct: 22  SGDFSGSIGLFKKMMSSGVEMDSYTFSCV-SKSFSSLRSVHGGEQLHGFILKSGF--GER 78

Query: 213 NHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLR 268
           N + N+++  Y++  Q++D A K+FDE+TE DV+SW+  I     +G+   GL  F  + 
Sbjct: 79  NSVGNSLVAFYLK-NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 137

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            +  +I+  T++++ +     R++  G+ + +   K  F       N L+ MY KCG ++
Sbjct: 138 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 197

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            A+++F  +  +  VS+ SMIAGY+  G   +A+ +F  M E  + P+ YT+ ++L   +
Sbjct: 198 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 257

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
             + L +  +VH  I ++    D  + + L+  Y KC ++ E++ V SE+  K+ +  N 
Sbjct: 258 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 317

Query: 449 LASVLVYASCHA-EALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           +       +C+A EAL L+  +    R   +  T + VL ACA+++  ++G+ IH   ++
Sbjct: 318 IIGGYS-KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 376

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             Y  D  V ++++DMY KCG +  A   F  I    L  W  M+ GY  HG   E   L
Sbjct: 377 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 436

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           FN+M + G++ DEI+++++L +C H+GLV E   + + M     + P +EHYACIVD+L 
Sbjct: 437 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 496

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R G L  A   I+ MPIPPDA IW +LL  C I+ ++ L      K+ EL+P+N   YVL
Sbjct: 497 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 556

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           ++N+YA A  W  V +LRK + ++ L K PG SWI + G  + F AGDSS+ +++ I   
Sbjct: 557 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 616

Query: 747 LIKLYEHMV 755
           L K+   M+
Sbjct: 617 LRKVRARMI 625



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 283/556 (50%), Gaps = 24/556 (4%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCL 105
           +N L++ LA+      ++ LF ++   G+  D++TFS + K+  SL+     E +HG  L
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K GF  R  + +  +  Y K+  + SA   F +  + D +++ +++ GYV NG  +K   
Sbjct: 72  KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           VFV+M   G+E++  ++ +V     D   +  G  +H  GVK  F     +   N ++++
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE--DRFCNTLLDM 189

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTM 279
           Y +CG    A  +F E+++  VVS++  IA  A +G+  EA  LF+++       + YT+
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
             +L+     R+L  GK++  +  +      + + NAL+ MY KCG + +A  +F  +  
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLE---FSLIPNGYTMASILEAVSNSKSLKQA 396
           KD +SWN++I GYS+N + N+AL +F  +LE   FS  P+  T+A +L A ++  +  + 
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS--PDERTVACVLPACASLSAFDKG 367

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            ++H +I+++G+  D  + + L+  Y KC AL  +  +  +I  K+ V    + +     
Sbjct: 368 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 427

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFV 515
               EA+ L+  +  +  E +  +F  +L AC+    +++G +  + +  + + +  +  
Sbjct: 428 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 487

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSK-- 572
            + ++DM  + G +  A R    +     A  W A++ G   H   H+V  L  K+++  
Sbjct: 488 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH---HDV-KLAEKVAEKV 543

Query: 573 FGVKPDEITYLAVLTS 588
           F ++P+   Y  ++ +
Sbjct: 544 FELEPENTGYYVLMAN 559



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 214/436 (49%), Gaps = 18/436 (4%)

Query: 236 FDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FDE+     + W+     +A + D   + GLFK +  +  +++ YT   +  S    R +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+Q+  F  K GF E  S+GN+L++ Y K  +V+ AR +FD +  +D +SWNS+I GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             NG   + L +F  ML   +  +  T+ S+    ++S+ +     VHS  +K+ F  +D
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
              + L+  Y KC  L+ +K V  E+  ++ V   ++ +         EA++L+  +   
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               +  T + VL  CA    L++GK +H    +     DIFV +A++DMY KCG++++A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN-KMSKFGVKPDEITYLAVLTSCCH 591
           +  F ++    +  WN ++ GY+++   +E  +LFN  + +    PDE T   VL +C  
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPP 645
                + R       ++HG I +  +++       +VD+  + G L  A M  D +    
Sbjct: 361 LSAFDKGR-------EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SK 412

Query: 646 DAHIWQSLLSACTIYG 661
           D   W  +++   ++G
Sbjct: 413 DLVSWTVMIAGYGMHG 428



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 199/400 (49%), Gaps = 12/400 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G      +  +L++ + K      A +   +   RD+I++N++I+G     
Sbjct: 65  QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +   L +F ++   G+  D  T  S+   C     +     VH + +K  FS      +
Sbjct: 125 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++ SA+  FR+  D   V+YT+M+ GY   G   ++ ++F EM   G+  
Sbjct: 185 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 244

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++TAVL      +   EG+++H + +K   L G    ++NA+M++Y +CG   +A  
Sbjct: 245 DVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDL-GFDIFVSNALMDMYAKCGSMQEAEL 302

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFK-DLRFNDFQINEYTMINLLSSVGGER 290
           +F E+   D++SW+  I      C   EA  LF   L    F  +E T+  +L +     
Sbjct: 303 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 362

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G++I  +  + G+     + N+L+ MY KCG +  A  +FD +  KD VSW  MIA
Sbjct: 363 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 422

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           GY  +GF  +A+ +F  M +  +  +  +  S+L A S+S
Sbjct: 423 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 462



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 181/359 (50%), Gaps = 9/359 (2%)

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  + ++ WN ++   +++G F+ ++ +F  M+   +  + YT + + ++ S+ +S+
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               Q+H  I+KSGF   +S+ + L+  Y K   ++ +++V  E+ +++ +  N++ +  
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V      + L ++  +  S  E++ +T   V   CA    +  G+A+H + +KA + ++ 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
              + ++DMY KCG ++ AK  FR++   S+  + +M+ GYA+ G   E   LF +M + 
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G+ PD  T  AVL  C    L+ E +     + + + L   +     ++D+  + G ++ 
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACT--IYGNIDLGLLAGSKLLE---LQPDNESTYVLL 687
           A++   +M +  D   W +++   +   Y N  L L   + LLE     PD  +   +L
Sbjct: 300 AELVFSEMRV-KDIISWNTIIGGYSKNCYANEALSLF--NLLLEEKRFSPDERTVACVL 355



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 9/255 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  + +N    D  +S  L+  + K    + A     + + +DII++N +I G ++ C
Sbjct: 267 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 326

Query: 61  QSGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
            +  AL LF+ L   +   PD  T + ++ AC SL    +   +HG  ++ G+ S  ++ 
Sbjct: 327 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 386

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK G ++ A M F D    D V++T M+ GY  +G   ++  +F +MR  G+E
Sbjct: 387 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +E S  ++L A   S  V EG +          +     H    I+++  R G  + A 
Sbjct: 447 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY-ACIVDMLARTGDLIKAY 505

Query: 234 KMFDEIT-EPDVVSW 247
           +  + +   PD   W
Sbjct: 506 RFIENMPIPPDATIW 520


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 208/615 (33%), Positives = 334/615 (54%), Gaps = 19/615 (3%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGF 201
           VA+T+++ GY  NG  + +  +F +M   G+  N+F+  A L A  D+   + GEQ+H  
Sbjct: 7   VAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSL 66

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE-- 259
            V+ GF       + + ++ +Y RCG    A ++FD +  PDVV ++  I+A C   E  
Sbjct: 67  AVRAGFAGDAW--IGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 124

Query: 260 --AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFM-EVVSIGN 315
             A  L + L+    + NE+TM  +L++    R+L  G+QI  +  K +G   + V    
Sbjct: 125 LAAEALIQMLK-QGLKPNEHTMTTILTAC--PRVL--GQQIHGYLIKKIGLRSQSVYSST 179

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI  Y + G+   A+++FD L  K+ VSW SM+  Y  +G   +AL +F  M+   + P
Sbjct: 180 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 239

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N + ++ +L A     S+    Q+H   IK   + D  + + L++ YG+   + E + +L
Sbjct: 240 NEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAML 296

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           ++I+  + V      S         +A+ L   +       NG  FS VL +CA +  L+
Sbjct: 297 NKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLD 356

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           QG   HCLALK   D +I   +A+I+MY KCG +  A+ AF  +    +  WN+++ G+A
Sbjct: 357 QGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHA 416

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           QHG  ++   +F+KM   G+KPD+ T+L VL  C H+G+V E   +   M D +   P  
Sbjct: 417 QHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAP 476

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
            HYAC++D+LGR G  + A   I+ MP  PDA IW++LL++C ++ N+D+G LA  +L+E
Sbjct: 477 SHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLME 536

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           L   + ++YVL+SN+YA  G W D  K+R+ M E  + K+ G SWI +    H F + D 
Sbjct: 537 LSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDM 596

Query: 736 SHSQSKEIYKELIKL 750
           SH  S  IY+ L +L
Sbjct: 597 SHPNSDSIYQMLGEL 611



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 150/581 (25%), Positives = 266/581 (45%), Gaps = 54/581 (9%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           ++++ + +++SG  R  +   AL +F  +   G+ P+ F  ++ + AC   G+L+  E V
Sbjct: 4   KNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQV 63

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H + ++ GF+   ++ S  IE Y++ G + +A+  F      D V YT+++  +  NGEF
Sbjct: 64  HSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEF 123

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           + + E  ++M   GL+ NE ++T +L A   V  G+QIHG+ +K   L     + + A++
Sbjct: 124 ELAAEALIQMLKQGLKPNEHTMTTILTACPRVL-GQQIHGYLIKKIGLRSQSVYSSTALI 182

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEY 277
           + Y R G+   A  +FD +   +VVSW   +     DG   EA  +F D+       NE+
Sbjct: 183 DFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEF 242

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            +  +L + G    +  G+Q+     K   +  + + NAL+SMYG+ G V +  ++ + +
Sbjct: 243 ALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 299

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
              D VSW + I+   +NGF  +A+ + C M      PNGY  +S+L + ++  SL Q M
Sbjct: 300 ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGM 359

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q H   +K G   +    + LI  Y KC  +  ++     +   +    N+L        
Sbjct: 360 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 419

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              +ALE++  +  +  + + STF  VL  C     +E+G+    L  +   DQ  F  +
Sbjct: 420 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE----LFFRLMIDQYSFTPA 475

Query: 518 A-----VIDMYCKCGTIEDAKRAFR---------------------------KICRDSL- 544
                 +IDM  + G  ++A R                              K+  D L 
Sbjct: 476 PSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLM 535

Query: 545 -------AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
                  A +  M   YA HG + +   +  +M + GVK D
Sbjct: 536 ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKD 576



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 241/468 (51%), Gaps = 21/468 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + LI  +++      A        + D++ Y +LIS    FC
Sbjct: 62  QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA---FC 118

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCL-KLGFSSR-VYL 115
           ++G    A +   ++  QGL+P+  T ++++ AC  +   +I HG  + K+G  S+ VY 
Sbjct: 119 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQI-HGYLIKKIGLRSQSVYS 177

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  I+ Y+++GE   A+  F D L   N V++ +M+  Y+ +G  +++ +VF +M S G
Sbjct: 178 STALIDFYSRNGEFKLAKAVF-DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ NEF+L+ VLGA   +  G Q+H   +K   ++ +   ++NA++++Y R G   +   
Sbjct: 237 VDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDI--RVSNALLSMYGRTGLVEELEA 294

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           M ++I  PD+VSW+  I+A      G +A  L   +    F  N Y   ++LSS      
Sbjct: 295 MLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 354

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G Q      K+G    +  GNALI+MY KCGQ+  AR  FD +   D  SWNS+I G
Sbjct: 355 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 414

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           ++++G  N+AL++F  M    + P+  T   +L   ++S  +++       +I    F  
Sbjct: 415 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 474

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
             S  +C+I   G+    +E+ R+++++        +AL    + ASC
Sbjct: 475 APSHYACMIDMLGRNGRFDEALRMINDM----PFEPDALIWKTLLASC 518



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 11/319 (3%)

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+ V+W S+++GY+ NG    AL MF  M+E  + PN +   + L A ++  +L+   QV
Sbjct: 4   KNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQV 63

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           HS  +++GF  D  + SCLI  Y +C +L  +K V   +D  + V   +L S        
Sbjct: 64  HSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEF 123

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK--ARYDQDIFVES 517
             A E    +     + N  T + +L AC  +     G+ IH   +K      Q ++  +
Sbjct: 124 ELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSST 179

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+ID Y + G  + AK  F  +   ++  W +MM  Y + G   E   +F  M   GV P
Sbjct: 180 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 239

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           +E     VL +C   GL R+    L C +  H LI  +     ++ + GR GL+E  +  
Sbjct: 240 NEFALSIVLGACGSIGLGRQ----LHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 295

Query: 638 IDQMPIPPDAHIWQSLLSA 656
           ++++   PD   W + +SA
Sbjct: 296 LNKIE-NPDLVSWTTAISA 313



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
           R ++  W ++M GY ++G       +F  M + GV P++    A L +C   G +R A  
Sbjct: 3   RKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALR-AGE 61

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
            +  ++   G        +C++++  R G L  AK   D+M   PD   + SL+SA    
Sbjct: 62  QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD-SPDVVGYTSLISAFCRN 120

Query: 661 GNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
           G  +L   A  ++L+  L+P+  +   +L+
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILT 150


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 223/765 (29%), Positives = 377/765 (49%), Gaps = 21/765 (2%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
            ++SLL +     DP+ S  LI+ + K  D+  A   F+ +   Q  D++++NA+IS    
Sbjct: 252  LHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVE 311

Query: 59   FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVY 114
              + G A+ +F RLR +G+RP++ T  +++ A  +           HG   + G+   V 
Sbjct: 312  AGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVV 371

Query: 115  LVSGFIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + +  I  YAK G   +A   FR      D +++  M+        F K    F  M   
Sbjct: 372  IGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLA 431

Query: 174  GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            G++ N+ S  A+L A  + +    G +IH   +       V + +   ++++Y +CG   
Sbjct: 432  GIDPNKVSFIAILNACSNSEALDFGRKIHSL-ILTRRRDYVESSVATMLVSMYGKCGSIS 490

Query: 231  DAVKMFDEITEPD--VVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
            +A  +F E+  P   +V+W+  + A        EAFG   ++       +  +  ++LSS
Sbjct: 491  EAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSS 550

Query: 286  VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                       Q+   C          +  ALISM+G+C ++  ARS+F+ +   D VSW
Sbjct: 551  C----YCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSW 606

Query: 346  NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
             +M++  +EN  F +  ++F  M    +IP+ +T+A+ L+    S +L     +H+ + +
Sbjct: 607  TAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTE 666

Query: 406  SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             G   D ++ + L+  Y  C    E+      +  ++ V  N +++    A    EA+ L
Sbjct: 667  IGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726

Query: 466  YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            +R +     + +  TFS  L        +  GK  H LA ++  D D+ V + ++ +Y K
Sbjct: 727  FRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAK 786

Query: 526  CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            CG +++A   FR  C  ++   NA++   AQHG   E   +F KM + GV+PD  T +++
Sbjct: 787  CGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSI 846

Query: 586  LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
            +++C HAG+V E  +    M +  G+ P LEHYAC VDLLGR G LE A+  I +MP   
Sbjct: 847  ISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906

Query: 646  DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
            +  +W SLL  C + G+ +LG     ++LEL P N + +V+LSN+Y + G W D    RK
Sbjct: 907  NTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRK 966

Query: 706  EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            +M ++ +   PG SW  +G   H F AGD SH ++ EIY  L KL
Sbjct: 967  KMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKL 1011



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 164/650 (25%), Positives = 296/650 (45%), Gaps = 26/650 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ L ++       ++   +I+ + K      A         +D++++ A+    A+  +
Sbjct: 153 IWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERR 212

Query: 62  SGP-ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
             P AL++F  +  Q L P+  TF + + AC SL++   +H +  +          +  I
Sbjct: 213 FYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALI 272

Query: 121 ENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             Y K G+   A   F+      +LD V++ AM+   V  G    +  +F  +R  G+  
Sbjct: 273 NMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRP 332

Query: 178 NEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N  +L  +L A      D       HG   + G+L  V   + NAI+++Y +CG    A 
Sbjct: 333 NSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVV--IGNAIISMYAKCGFFSAAW 390

Query: 234 KMFDEIT-EPDVVSWSERIAAACDGVEAFG----LFKDLRFNDFQINEYTMINLLSSVGG 288
            +F  I  + DV+SW+  + A+ D  ++FG     F  +       N+ + I +L++   
Sbjct: 391 AVFRRIRWKCDVISWNTMLGASEDR-KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449

Query: 289 ERILRAGKQIQA--FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF--KDSVS 344
              L  G++I +     +  ++E  S+   L+SMYGKCG +++A  +F  +    +  V+
Sbjct: 450 SEALDFGRKIHSLILTRRRDYVE-SSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVT 508

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN M+  Y++N    +A      ML+  ++P+  +  S+L +   S   ++A  +   I+
Sbjct: 509 WNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCIL 565

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           +SG+     + + LI+ +G+C  L +++ V +E+D  + V   A+ S         E   
Sbjct: 566 ESGY-RSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHN 624

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +       +  T +  L  C A T L  GK IH    +   + DI VE+A+++MY 
Sbjct: 625 LFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYS 684

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            CG   +A   F  +    L  WN M   YAQ G   E   LF +M   GVKPD++T+  
Sbjct: 685 NCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFST 744

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
            L     + LV + + + +  ++  GL   +     +V L  + G L+ A
Sbjct: 745 TLNVSGGSALVSDGKLFHALAAE-SGLDSDVSVATGLVKLYAKCGKLDEA 793



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 288/607 (47%), Gaps = 48/607 (7%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D   +++L+++C     L + +  H +    G    ++L +  I  Y + G +  A   F
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE----LNEFSLTAVLGA---S 189
               + + V++TA++      G F ++  +F   R++ LE     N ++L A+L A   S
Sbjct: 84  SKMEERNVVSWTALISANAQCGAFARAFALF---RTMLLESSAAPNSYTLVAMLNACANS 140

Query: 190 FDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            D+  G  IH    ++G    S     + NA++N+Y +CG   DA+ +F  I E DVVSW
Sbjct: 141 RDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSW 200

Query: 248 SERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           +    A         +A  +F+++       N   +I  ++++G    LR G  + +  +
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQPLAPN---VITFITALGACTSLRDGTWLHSLLH 257

Query: 304 K--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK---DSVSWNSMIAGYSENGFF 358
           +  +GF  + S  NALI+MYGKCG    A S+F  +  +   D VSWN+MI+   E G  
Sbjct: 258 EASLGFDPLAS--NALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRH 315

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSK-SLKQAMQVHSHIIKSGFLLDDSMISC 417
             A+ +F  +    + PN  T+ +IL A++ S      A   H  I +SG+L D  + + 
Sbjct: 316 GDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNA 375

Query: 418 LITTYGKCNALNESKRVLSEIDKK-NAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
           +I+ Y KC   + +  V   I  K + +  N +           + +  +  +  +  + 
Sbjct: 376 IISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDP 435

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV----IDMYCKCGTIEDA 532
           N  +F  +L AC+    L+ G+ IH L L  R D   +VES+V    + MY KCG+I +A
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRD---YVESSVATMLVSMYGKCGSISEA 492

Query: 533 KRAFRK--ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC- 589
           +  F++  +   SL  WN M+  YAQ+    E      +M + GV PD +++ +VL+SC 
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           C     +EA+    C+ +       LE    ++ + GR   LE A+   ++M    D   
Sbjct: 553 CS----QEAQVLRMCILESGYRSACLE--TALISMHGRCRELEQARSVFNEMD-HGDVVS 605

Query: 650 WQSLLSA 656
           W +++SA
Sbjct: 606 WTAMVSA 612



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/360 (20%), Positives = 156/360 (43%), Gaps = 13/360 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+  + I    +    L T LIS   +  +  +A     +  + D++++ A++S  A   
Sbjct: 558 QVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENR 617

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
                  LF R++ +G+ PD FT ++ +  C    +L   +++H    ++G  + + + +
Sbjct: 618 DFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVEN 677

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+  G+   A   F      D V++  M   Y   G   ++  +F +M+  G++ 
Sbjct: 678 ALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKP 737

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ + +  L   G S  V +G+  H    + G  S V   +   ++ LY +CG+  +A+ 
Sbjct: 738 DKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDV--SVATGLVKLYAKCGKLDEAMS 795

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F    +  VV  +  I A        EA  +F  ++    + +  T+++++S+ G   +
Sbjct: 796 LFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGM 855

Query: 292 LRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMI 349
           +  G           G    +      + + G+ GQ+  A  I   + F+D ++ W S++
Sbjct: 856 VEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 236/749 (31%), Positives = 370/749 (49%), Gaps = 32/749 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L + +G +  P L+  L+S ++       A      +   D   +N+LI      C
Sbjct: 31  RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIR--THHC 88

Query: 61  QSG--PALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGF----SS 111
            S    AL    R+   G RP  FT    +S     G+L     VH  C++ G       
Sbjct: 89  ASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGD 148

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            V + S  +  YA+ G +  A   F +  + D VA+TA++ G V NGE  +     VEM 
Sbjct: 149 SVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMV 208

Query: 172 SLG----LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            L     +  N  ++ + L   G   ++  G  +HG+ VKVG   G    + +A+ ++Y 
Sbjct: 209 RLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGI--GDSPMVISALFSMYS 266

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMIN 281
           +C    DA  +F E+ E DVVSW+  I   C      EA  LF+ +  +  Q +E  +  
Sbjct: 267 KCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSC 326

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LS +G    +  GK   A   K  F + V IGNALISMYGK   V+ A  +F  L  +D
Sbjct: 327 VLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRD 386

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHM-----LEFSLIPNGYTMASILEAVSNSKSLKQA 396
           + SWN M+ GY + G   + L+++  M      EF  + +  ++ S + + S    L+  
Sbjct: 387 ADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD--SLVSAISSCSRLAELRLG 444

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVY 455
              H + IK     D S+ + LI  YG+C   + + ++      K + V  N L S   +
Sbjct: 445 RSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAH 504

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                 A+ LY  +       N +T   V+ ACA +  LE+G+ IH    +  +D D+ +
Sbjct: 505 LGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSI 564

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            +A+IDMY KCG +  A+R F  + +  +  WN M+ GY  HG   +   LF KM    +
Sbjct: 565 NTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSI 624

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           KP+ +T+LA+L++ CH+GL+ E R   + M   + L P L+HYAC+VDLLG+ G L+ A+
Sbjct: 625 KPNGVTFLAILSALCHSGLLEEGRKVFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAE 683

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
             +  MPI PD  IW +LLSAC ++ N ++GL    K     P+NE  Y+L+SN Y  A 
Sbjct: 684 DMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAK 743

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
            W+++ KLR+ MK   + K  G+S +  G
Sbjct: 744 KWDEIEKLRETMKNLGVQKGVGWSAVDYG 772


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 226/713 (31%), Positives = 375/713 (52%), Gaps = 39/713 (5%)

Query: 59  FCQSGPALKLFDRL---RYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFS-S 111
           + + G  L++ D+    R  G+  D+ T S ++KAC S+ +    E +H +C+K G    
Sbjct: 74  YARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRG 133

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            V   +  ++ Y K G +      F      + V +T+++ G        +   +F  MR
Sbjct: 134 EVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR 193

Query: 172 SLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           + G+  N F+  +VL A     + D+  G+++H   VK G  S V   + N++MN+Y +C
Sbjct: 194 AEGIWPNPFTFASVLSAVASQGALDL--GQRVHAQSVKFGCRSSV--FVCNSLMNMYAKC 249

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           G   DA  +F+ +   D+VSW+  +A      C+ +EA  LF + R    ++ + T   +
Sbjct: 250 GLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE-LEALQLFHESRATMGKMTQSTYATV 308

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKD 341
           +      + L   +Q+ +   K GF    ++  AL   Y KCG++ DA +IF      ++
Sbjct: 309 IKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRN 368

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSW ++I+G  +NG    A+ +F  M E  ++PN +T +++L+A   S S+    Q+H+
Sbjct: 369 VVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA---SLSILPP-QIHA 424

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            +IK+ +     + + L+ +Y K  +  ++  +   I++K+ V  +A+ S      CHA+
Sbjct: 425 QVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS------CHAQ 478

Query: 462 ALE------LYRTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLALKARYDQDIF 514
           A +      L+  +     + N  T S V+ ACA  +  ++QG+  H +++K RY   I 
Sbjct: 479 AGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAIC 538

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V SA++ MY + G I+ A+  F +     L  WN+M+ GYAQHG   +    F +M   G
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASG 598

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++ D +T+LAV+  C H GLV E + Y   M   H + P +EHYAC+VDL  R G L+  
Sbjct: 599 IQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDET 658

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              I  MP P  A +W++LL AC ++ N++LG  +  KLL L+P + STYVLLSN+YA+A
Sbjct: 659 MSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAA 718

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           G W +  ++RK M  + + KE G SWI +    H F A D SH  S +IYK+L
Sbjct: 719 GKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 264/553 (47%), Gaps = 21/553 (3%)

Query: 1   QIYSLLIKNGHHLDPILS-TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q++ L +K GH    + + T+L+  + K                ++++T+ +L++G A  
Sbjct: 120 QLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHA 179

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                 + LF R+R +G+ P+ FTF+S++ A    G+L   + VH   +K G  S V++ 
Sbjct: 180 QMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVC 239

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK G +  A+  F      D V++  ++ G   N    ++ ++F E R+   +
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGK 299

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNAIMNLYVRCGQKLDA 232
           + + +   V+    ++K+     Q+H   +K GF L+G   ++  A+ + Y +CG+  DA
Sbjct: 300 MTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG---NVMTALADAYSKCGELADA 356

Query: 233 VKMFDEIT-EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           + +F   T   +VVSW+  I+      D   A  LF  +R +    NE+T   +L +   
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA--S 414

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             IL    QI A   K  +  +  +G AL++ Y K G   DA SIF  +  KD V+W++M
Sbjct: 415 LSIL--PPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS-NSKSLKQAMQVHSHIIKSG 407
           ++ +++ G    A  +F  M    + PN +T++S+++A +  S  + Q  Q H+  IK  
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           +     + S L++ Y +   ++ ++ V      ++ V  N++ S         +A+E +R
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKC 526
            +  S  +++G TF  V+  C     + +G+     +    + +  +   + ++D+Y + 
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRA 652

Query: 527 GTIEDAKRAFRKI 539
           G +++     R +
Sbjct: 653 GKLDETMSLIRDM 665



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 6/359 (1%)

Query: 330 ARSIFDYLIFKDS-VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           AR   D +  +D+ V  N ++  Y+  G   + LD F       ++ +  T++ +L+A  
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +        Q+H   +K G    + S  + L+  Y KC ++ E   V   + KKN V   
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           +L +   +A  H+E + L+  +       N  TF+ VL A A+   L+ G+ +H  ++K 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
                +FV +++++MY KCG +EDAK  F  +    +  WN +M G   + C  E   LF
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           ++      K  + TY  V+  C +   +  AR   SC+   HG          + D   +
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK-HGFHLTGNVMTALADAYSK 349

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTY 684
            G L  A           +   W +++S C   G+I L ++  S++ E  + P NE TY
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMP-NEFTY 407



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 128/249 (51%), Gaps = 8/249 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK  +   P + T L++ ++KF     A       + +D++ ++A++S  A+  
Sbjct: 421 QIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAG 480

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
               A  LF+++  QG++P+ FT SS++ AC      + +    H + +K  +   + + 
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVS 540

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y++ G I SA++ F    D D V++ +M+ GY  +G   K+ E F +M + G++
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQ 600

Query: 177 LNEFSLTAV-LGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  +  AV +G + +  V EG+Q     V+   ++    H    +++LY R G+  + +
Sbjct: 601 MDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY-ACMVDLYSRAGKLDETM 659

Query: 234 KMFDEITEP 242
            +  ++  P
Sbjct: 660 SLIRDMPFP 668


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/651 (32%), Positives = 347/651 (53%), Gaps = 26/651 (3%)

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
           +C++LG        +  +  + + G ++ A   F    + D  ++  +V GY   G FD+
Sbjct: 130 LCVRLG--------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDE 181

Query: 163 SKEVFVEMRSLGLELNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           +  ++  M    +  N ++  +VL    G S D+  G++IH   ++ GF S V   + NA
Sbjct: 182 ALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS-DIARGKEIHAHVIRFGFESDV--DVGNA 238

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDF 272
           ++ +YV+CG   +A  +FD++ + D +SW+  I+         +G+E F + ++L  +  
Sbjct: 239 LITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPD 298

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
            I   T+ +    +  ER+   G+ +  +  K  F   +S+ N+LI MY   G++ +A +
Sbjct: 299 LITMTTVASACELLDNERL---GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  +  KD VSW +MIA    +    +A++ +  M    ++P+  T+ S+L A +    
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L   +++H   IK+G +    + + LI  Y KC  ++ +  V   I  KN V   +L   
Sbjct: 416 LDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG 475

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           L   +   EAL  +R +  S +  N  T   VL ACA +  L +GK IH  AL+     D
Sbjct: 476 LRINNRSFEALLFFRQMKESMKP-NSVTLISVLSACARIGALMRGKEIHAHALRTGVGFD 534

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            F+ +A++DMY +CG    A   F    +D  A WN ++ GYAQ G       LF+KM +
Sbjct: 535 GFLPNAILDMYVRCGRKVPALNQFNSQKKDVTA-WNILLTGYAQQGQAKLAVELFDKMLE 593

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             + PDEIT++++L +C  +G+V E   Y + M + + L P L+HYAC+VD+LGR G L+
Sbjct: 594 LEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLD 653

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I  MPI PDA IW +LL+AC I+ N++LG +A  ++ E    +   Y+LL NLYA
Sbjct: 654 DAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYA 713

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
             G W+ V K+R  M+E+ L  +PG SW+ + G  H F +GD+SHSQSKEI
Sbjct: 714 GCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEI 764



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 269/566 (47%), Gaps = 23/566 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++Y L+  +   L   L   L+S F +F +   A+        RD+ ++N L+ G A+  
Sbjct: 118 RVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAG 177

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL L+ R+ +  +RP+ +TF S++K C  + +    + +H   ++ GF S V + +
Sbjct: 178 CFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGN 237

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G+I +A M F      D +++ AM+ GY  NG   +  E+F  MR L ++ 
Sbjct: 238 ALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP 297

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++T V  A     + + G  +HG+ VK  F   +   +NN+++ +Y   G+  +A  
Sbjct: 298 DLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDIS--MNNSLIQMYSSLGRLEEAET 355

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   DVVSW+  IA+        +A   +K +       +E T++++LS+      
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G ++     K G +  V + N+LI MY KC  V++A  +F  +  K+ VSW S+I G
Sbjct: 416 LDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG 475

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
              N    +AL  F  M E S+ PN  T+ S+L A +   +L +  ++H+H +++G   D
Sbjct: 476 LRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFD 534

Query: 412 DSMISCLITTYGKCN----ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             + + ++  Y +C     ALN+         KK+    N L +          A+EL+ 
Sbjct: 535 GFLPNAILDMYVRCGRKVPALNQFNS-----QKKDVTAWNILLTGYAQQGQAKLAVELFD 589

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +       +  TF  +L AC+    + +G +  + +  K     ++   + V+D+  + 
Sbjct: 590 KMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRA 649

Query: 527 GTIEDAKRAFRKI-CRDSLAGWNAMM 551
           G ++DA    + +  R   A W A++
Sbjct: 650 GQLDDAYDFIQDMPIRPDAAIWGALL 675



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 150/353 (42%), Gaps = 49/353 (13%)

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   QA+     MLE  +        ++L      ++  +  +V+  +  S   L   + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY-RTIWGSCR 474
           + L++ + +   L ++  V  ++ +++    N L      A C  EAL LY R +W   R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             N  TF  VLK CA ++D+ +GK IH   ++  ++ D+ V +A+I MY KCG I +A+ 
Sbjct: 196 P-NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F K+ +     WNAM+ GY ++G   E   LF+ M +  V PD IT   V ++C     
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACI------VDLLGRVGLLEGAKMTIDQMP------ 642
            R  R        +HG + + E    I      + +   +G LE A+    +M       
Sbjct: 315 ERLGR-------GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVS 367

Query: 643 ----------------------------IPPDAHIWQSLLSACTIYGNIDLGL 667
                                       I PD     S+LSAC   G++DLG+
Sbjct: 368 WTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGI 420


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/651 (32%), Positives = 347/651 (53%), Gaps = 26/651 (3%)

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
           +C++LG        +  +  + + G ++ A   F    + D  ++  +V GY   G FD+
Sbjct: 130 LCVRLG--------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDE 181

Query: 163 SKEVFVEMRSLGLELNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           +  ++  M    +  N ++  +VL    G S D+  G++IH   ++ GF S V   + NA
Sbjct: 182 ALNLYHRMLWAEIRPNVYTFPSVLKTCAGVS-DIARGKEIHAHVIRFGFESDV--DVGNA 238

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDF 272
           ++ +YV+CG   +A  +FD++ + D +SW+  I+         +G+E F + ++L  +  
Sbjct: 239 LITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPD 298

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
            I   T+ +    +  ER+   G+ +  +  K  F   +S+ N+LI MY   G++ +A +
Sbjct: 299 LITMTTVASACELLDNERL---GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  +  KD VSW +MIA    +    +A++ +  M    ++P+  T+ S+L A +    
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L   +++H   IK+G +    + + LI  Y KC  ++ +  V   I  KN V   +L   
Sbjct: 416 LDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG 475

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           L   +   EAL  +R +  S +  N  T   VL ACA +  L +GK IH  AL+     D
Sbjct: 476 LRINNRSFEALLFFRQMKESMKP-NSVTLISVLSACARIGALMRGKEIHAHALRTGVGFD 534

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            F+ +A++DMY +CG    A   F    +D  A WN ++ GYAQ G       LF+KM +
Sbjct: 535 GFLPNAILDMYVRCGRKVPALNQFNSQKKDVTA-WNILLTGYAQQGQAKLAVELFDKMLE 593

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             + PDEIT++++L +C  +G+V E   Y + M + + L P L+HYAC+VD+LGR G L+
Sbjct: 594 LEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLD 653

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I  MPI PDA IW +LL+AC I+ N++LG +A  ++ E    +   Y+LL NLYA
Sbjct: 654 DAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYA 713

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
             G W+ V K+R  M+E+ L  +PG SW+ + G  H F +GD+SHSQSKEI
Sbjct: 714 GCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEI 764



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 269/566 (47%), Gaps = 23/566 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++Y L+  +   L   L   L+S F +F +   A+        RD+ ++N L+ G A+  
Sbjct: 118 RVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAG 177

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL L+ R+ +  +RP+ +TF S++K C  + +    + +H   ++ GF S V + +
Sbjct: 178 CFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGN 237

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G+I +A M F      D +++ AM+ GY  NG   +  E+F  MR L ++ 
Sbjct: 238 ALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDP 297

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++T V  A     + + G  +HG+ VK  F   +   +NN+++ +Y   G+  +A  
Sbjct: 298 DLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDIS--MNNSLIQMYSSLGRLEEAET 355

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   DVVSW+  IA+        +A   +K +       +E T++++LS+      
Sbjct: 356 VFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGH 415

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G ++     K G +  V + N+LI MY KC  V++A  +F  +  K+ VSW S+I G
Sbjct: 416 LDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG 475

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
              N    +AL  F  M E S+ PN  T+ S+L A +   +L +  ++H+H +++G   D
Sbjct: 476 LRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFD 534

Query: 412 DSMISCLITTYGKCN----ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             + + ++  Y +C     ALN+         KK+    N L +          A+EL+ 
Sbjct: 535 GFLPNAILDMYVRCGRKVPALNQFNS-----QKKDVTAWNILLTGYAQQGQAKLAVELFD 589

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +       +  TF  +L AC+    + +G +  + +  K     ++   + V+D+  + 
Sbjct: 590 KMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRA 649

Query: 527 GTIEDAKRAFRKI-CRDSLAGWNAMM 551
           G ++DA    + +  R   A W A++
Sbjct: 650 GQLDDAYDFIQDMPIRPDAAIWGALL 675



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 150/353 (42%), Gaps = 49/353 (13%)

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   QA+     MLE  +        ++L      ++  +  +V+  +  S   L   + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY-RTIWGSCR 474
           + L++ + +   L ++  V  ++ +++    N L      A C  EAL LY R +W   R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             N  TF  VLK CA ++D+ +GK IH   ++  ++ D+ V +A+I MY KCG I +A+ 
Sbjct: 196 P-NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F K+ +     WNAM+ GY ++G   E   LF+ M +  V PD IT   V ++C     
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACI------VDLLGRVGLLEGAKMTIDQMP------ 642
            R  R        +HG + + E    I      + +   +G LE A+    +M       
Sbjct: 315 ERLGR-------GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVS 367

Query: 643 ----------------------------IPPDAHIWQSLLSACTIYGNIDLGL 667
                                       I PD     S+LSAC   G++DLG+
Sbjct: 368 WTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGI 420


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 198/556 (35%), Positives = 289/556 (51%), Gaps = 70/556 (12%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + + + + + S    R L  G+Q+ AF    GF+    + ++L  MY KC ++ DAR +F
Sbjct: 103 DAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLF 162

Query: 335 DYLIFKDSVSWNSMIAGYSE-----------------------------------NGFFN 359
           D +  +D V W++MIAGYS                                    NGF++
Sbjct: 163 DRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYD 222

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A+ MF  ML     P+G T++ +L AV   + +    QVH ++IK G   D  ++S ++
Sbjct: 223 EAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAML 282

Query: 420 TTYGKCNALNESKRVLSEID------------------------------KKNAVHINAL 449
             YGKC  + E  RV  E++                              K   + +N +
Sbjct: 283 DMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVV 342

Query: 450 ASVLVYASCHA-----EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
               + ASC       EALEL+R +     E N  T   ++ AC  ++ L  GK IHC +
Sbjct: 343 TWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFS 402

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           L+     D++V SA+IDMY KCG I+ A+R F K+   +L  WNA+M GYA HG   E  
Sbjct: 403 LRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETM 462

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            +F+ M + G KPD +T+  VL++C   GL  E     + MS+ HG+ P++EHYAC+V L
Sbjct: 463 EMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTL 522

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           L RVG LE A   I +MP  PDA +W +LLS+C ++ N+ LG +A  KL  L+P N   Y
Sbjct: 523 LSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNY 582

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           +LLSN+YAS G+W++  ++R+ MK K L K PGYSWI VG   H   AGD SH Q K+I 
Sbjct: 583 ILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDIL 642

Query: 745 KELIKLYEHMVATAKL 760
           ++L KL   M  +  L
Sbjct: 643 EKLDKLNMQMKKSGYL 658



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 225/521 (43%), Gaps = 85/521 (16%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q ++L+++     D  L+T+L+S +      +  + +        +  + ++++LI   A
Sbjct: 21  QAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFA 80

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVY 114
           R       L  F  L    L PDAF   S +K+C SL+     + +H      GF +   
Sbjct: 81  RSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSI 140

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S     Y K   I+ A   F    D D V ++AM+ GY   G  +++KE+F EMRS G
Sbjct: 141 VASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGG 200

Query: 175 LELNEFSLTAVL--------------------------------------GASFDVKEGE 196
           +E N  S   +L                                      G   DV  G 
Sbjct: 201 VEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGA 260

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD------------- 243
           Q+HG+ +K G   G    + +A++++Y +CG   +  ++FDE+ E +             
Sbjct: 261 QVHGYVIKQGL--GSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSR 318

Query: 244 ----------------------VVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYT 278
                                 VV+W+  IA+       +EA  LF+D++    + N  T
Sbjct: 319 NGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVT 378

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + +L+ + G    L  GK+I  F  + G  + V +G+ALI MY KCG++  AR  FD + 
Sbjct: 379 IPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMS 438

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
             + VSWN+++ GY+ +G   + ++MF  ML+    P+  T   +L A + +   ++  +
Sbjct: 439 ALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWR 498

Query: 399 VHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            ++ + +  G        +CL+T   +   L E+  ++ E+
Sbjct: 499 CYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/490 (22%), Positives = 206/490 (42%), Gaps = 81/490 (16%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-- 144
           L  +  SL +    H + L+L   S   L +  +  YA +  + + ++       L +  
Sbjct: 9   LSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPT 68

Query: 145 -VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHG 200
             ++++++  +  +  F      F  +  L L  + F L + + +   ++    G+Q+H 
Sbjct: 69  LFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHA 128

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------- 253
           F    GFL+   + + +++ ++Y++C + LDA K+FD + + DVV WS  IA        
Sbjct: 129 FAAASGFLTD--SIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLV 186

Query: 254 --------------------ACDGV-----------EAFGLFKDLRFNDFQINEYTMINL 282
                               + +G+           EA G+F+ +    F  +  T+  +
Sbjct: 187 EEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCV 246

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD------- 335
           L +VG    +  G Q+  +  K G      + +A++ MYGKCG V +   +FD       
Sbjct: 247 LPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEI 306

Query: 336 ----------------------YLIFKDS------VSWNSMIAGYSENGFFNQALDMFCH 367
                                 +  FKD       V+W S+IA  S+NG   +AL++F  
Sbjct: 307 GSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRD 366

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M  + + PN  T+ S++ A  N  +L    ++H   ++ G   D  + S LI  Y KC  
Sbjct: 367 MQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGR 426

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  ++R   ++   N V  NA+           E +E++  +  S ++ +  TF+ VL A
Sbjct: 427 IQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSA 486

Query: 488 CAAMTDLEQG 497
           CA     E+G
Sbjct: 487 CAQNGLTEEG 496



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 8/244 (3%)

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S++ SL QA Q H+ I++     D  + + L++ Y   NAL+ S   LS     +  H  
Sbjct: 11  SSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYA--NALSLSTPQLSLTLSSHLPHPT 68

Query: 448 ALA-SVLVYASCHAEALELYRTIWGSCREV----NGSTFSIVLKACAAMTDLEQGKAIHC 502
             + S L++A   +       T +     +    +       +K+CA++  L+ G+ +H 
Sbjct: 69  LFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHA 128

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
            A  + +  D  V S++  MY KC  I DA++ F ++    +  W+AM+ GY++ G   E
Sbjct: 129 FAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEE 188

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              LF +M   GV+P+ +++  +L    + G   EA      M  + G  P     +C++
Sbjct: 189 AKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMML-VQGFWPDGSTVSCVL 247

Query: 623 DLLG 626
             +G
Sbjct: 248 PAVG 251


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 235/748 (31%), Positives = 375/748 (50%), Gaps = 18/748 (2%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
             L++ + K  D   A +        D I++NA+I+G     +    L+LF  +    ++
Sbjct: 236 NALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295

Query: 79  PDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P+  T +S+  A G L E    + +HG  +K GF+  V   +  I+ Y   G +  A   
Sbjct: 296 PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKI 355

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASF 190
           F      D +++TAM+ GY  NG  DK+ EV+  M    +  ++ ++ + L         
Sbjct: 356 FSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRL 415

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           DV  G ++H      GF+  V   + NA++ +Y +      A+++F  + E DVVSWS  
Sbjct: 416 DV--GIKLHELAQNKGFIRYVV--VANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSM 471

Query: 251 IAAACDGVEAFGLFKDLRF--NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           IA  C    +F      R+     + N  T I  LS+      LR+GK+I A+  + G  
Sbjct: 472 IAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIG 531

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + NAL+ +Y KCGQ + A + F     KD VSWN M++G+  +G  + AL +F  M
Sbjct: 532 SEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +  SL   G   A    A      L   +++H      GF+    + + L+  Y K   +
Sbjct: 592 MYTSLGRMGACSALAACACLGR--LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHI 649

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           +++  V   + +K+ V  +++ +   +     +AL  +R + G  +  N  TF   L AC
Sbjct: 650 DKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKP-NSVTFIAALSAC 708

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           AA   L  GK IH   L+     + +V +A++D+Y KCG    A   F       +  WN
Sbjct: 709 AATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWN 768

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            M+ G+  HG      +LFN+M + G  PDE+T++ ++ +C  AG+V +        ++ 
Sbjct: 769 IMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEK 827

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
             ++P L+HYAC+VDLL RVG L  A   I++MPI PDA +W +LL+ C I+ +++LG L
Sbjct: 828 FSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGEL 887

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           A   +LEL+P++ + +VLL +LY  AG W  V ++RK M+EK L ++ G SW+ V G TH
Sbjct: 888 AAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTH 947

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            F   D SH Q KEI   L  +YE M A
Sbjct: 948 AFLTDDESHPQIKEINVVLHGIYERMKA 975



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 184/715 (25%), Positives = 340/715 (47%), Gaps = 39/715 (5%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   ++S   +F +   A+R       RD+ ++N ++ G  +      AL L+ R+ + G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +RPD +TF  +++ CG + +  +   VH   L+ GF   V +++  +  YAK G+IV+A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F      D +++ AM+ G+  N E +   E+F+ M    ++ N  ++T+V  AS  + 
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 194 E---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           E    +++HGF VK GF   V     N+++ +Y   G+  DA K+F  +   D +SW+  
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVA--FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 251 IAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G   +A  ++  +  ++   ++ T+ + L++      L  G ++       GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  V + NAL+ MY K   ++ A  +F ++  KD VSW+SMIAG+  N     AL  F +
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRY 490

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN  T  + L A + + +L+   ++H+++++ G   +  + + L+  Y KC  
Sbjct: 491 MLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
            + +    S   +K+ V  N + S  V       AL L+  +  +     G+  ++   A
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACA 609

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C    D+  G  +H LA    + + + V +A+++MY K   I+ A   F+ +    +  W
Sbjct: 610 CLGRLDV--GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 667

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFG-----VKPDEITYLAVLTSCCHAGLVREART-- 600
           ++M+ G+    C++  S  F+ +  F      VKP+ +T++A L++C   G +R  +   
Sbjct: 668 SSMIAGF----CFNHRS--FDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIH 721

Query: 601 --YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
              L C     G +P       ++DL  + G    A      +    D   W  +LS   
Sbjct: 722 AYVLRCGIGSEGYVPN-----ALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFV 775

Query: 659 IYGNIDLGLLAGSKLLEL--QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +G  D+ L   ++++E+   PD E T+VL+    + AGM     +L     EKF
Sbjct: 776 AHGLGDIALSLFNQMVEMGEHPD-EVTFVLMCAC-SRAGMVIQGWELFHRRTEKF 828


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 221/747 (29%), Positives = 368/747 (49%), Gaps = 48/747 (6%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L P LS  +  H   FA +  A ++L D            ++ LA    S P +      
Sbjct: 16  LLPTLSCPVAPHRRGFAAYAAALQWLEDE-----------LTSLA-ILPSVPGV------ 57

Query: 73  RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG--FIENYAKSG 127
                  D+F  +  ++ C   G  +    VHG  ++ G   R+ L      +  Y K G
Sbjct: 58  -------DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLG 110

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            + SA   F    + + V++  +V  +   G+F+ +  +F  +R  G E+N+F LT +L 
Sbjct: 111 PLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLK 170

Query: 188 ASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNA-----IMNLYVRCGQKLDAVKMFDEI 239
            +  +        +H    K+G       H +NA     +++ Y  C    DA  +F+ I
Sbjct: 171 LAIAMDAAGLAGGVHSCAWKLG-------HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI 223

Query: 240 TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              D V W+  ++   +      AF +F  +R +  + N + + ++L +      +  GK
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            I     K        +G AL+ MY KCG + DAR  F+ + + D +  + MI+ Y+++ 
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              QA ++F  ++  S++PN Y+++S+L+A +N   L    Q+H+H IK G   D  + +
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+  Y KCN ++ S ++ S +   N V  N +      +    EAL ++  +  +    
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
              T+S VL+ACA+   +     IHC   K+ ++ D  + +++ID Y KCG I DA + F
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
           + +    +  WNA++ GYA HG   +   LF++M+K  V+ ++IT++A+L+ C   GLV 
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              +    M   HG+ P +EHY CIV LLGR G L  A   I  +P  P A +W++LLS+
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+ N+ LG  +  K+LE++P +E+TYVLLSN+YA+AG  + V  LRK M+   + K P
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           G SW+ + G  H F  G   H   + I
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVI 730



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 178/361 (49%), Gaps = 15/361 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I+   IK  +  +P +   L+  + K  D + A R  F+     D+I  + +IS  A+  
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA-RLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q+  A +LF RL    + P+ ++ SS+++AC ++ +    + +H   +K+G  S +++ +
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK  ++ S+   F    D + V++  +V G+  +G  +++  VF EM++  +  
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            + + ++VL A   +  ++   QIH    K  F +     + N++++ Y +CG   DA+K
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV--IGNSLIDTYAKCGYIRDALK 521

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D++SW+  I+         +A  LF  +  ++ + N+ T + LLS      +
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 292 LRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
           +  G  +  +     G    +     ++ + G+ G++NDA + I D      ++ W +++
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 350 A 350
           +
Sbjct: 642 S 642



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 29/304 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  IK GH  D  +   L+  + K  D   + +     ++ + +++N ++ G   F 
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVG---FS 441

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           QSG    AL +F  ++   +     T+SS+++AC    S++    +H    K  F++   
Sbjct: 442 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 501

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ YAK G I  A   F+  ++ D +++ A++ GY  +G+   + E+F  M    
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGF----------GVKVGFLSGVCNHLNNAIMNLYV 224
           +E N+ +  A+L  S     G   HG           G+K       C      I+ L  
Sbjct: 562 VESNDITFVALL--SVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC------IVRLLG 613

Query: 225 RCGQKLDAVKMFDEI-TEPDVVSWSERIAAACDGVE-AFGLFKDLRFNDFQINEYTMINL 282
           R G+  DA++   +I + P  + W   +++       A G F   +  + +  + T   L
Sbjct: 614 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 673

Query: 283 LSSV 286
           LS++
Sbjct: 674 LSNM 677


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 221/747 (29%), Positives = 368/747 (49%), Gaps = 48/747 (6%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L P LS  +  H   FA +  A ++L D            ++ LA    S P +      
Sbjct: 16  LLPTLSCPVAPHRRGFAAYAAALQWLEDE-----------LTSLA-ILPSVPGV------ 57

Query: 73  RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG--FIENYAKSG 127
                  D+F  +  ++ C   G  +    VHG  ++ G   R+ L      +  Y K G
Sbjct: 58  -------DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLG 110

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            + SA   F    + + V++  +V  +   G+F+ +  +F  +R  G E+N+F LT +L 
Sbjct: 111 PLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLK 170

Query: 188 ASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNA-----IMNLYVRCGQKLDAVKMFDEI 239
            +  +        +H    K+G       H +NA     +++ Y  C    DA  +F+ I
Sbjct: 171 LAIAMDAAGLAGGVHSCAWKLG-------HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI 223

Query: 240 TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              D V W+  ++   +      AF +F  +R +  + N + + ++L +      +  GK
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            I     K        +G AL+ MY KCG + DAR  F+ + + D +  + MI+ Y+++ 
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              QA ++F  ++  S++PN Y+++S+L+A +N   L    Q+H+H IK G   D  + +
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+  Y KCN ++ S ++ S +   N V  N +      +    EAL ++  +  +    
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
              T+S VL+ACA+   +     IHC   K+ ++ D  + +++ID Y KCG I DA + F
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
           + +    +  WNA++ GYA HG   +   LF++M+K  V+ ++IT++A+L+ C   GLV 
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              +    M   HG+ P +EHY CIV LLGR G L  A   I  +P  P A +W++LLS+
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+ N+ LG  +  K+LE++P +E+TYVLLSN+YA+AG  + V  LRK M+   + K P
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVP 703

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           G SW+ + G  H F  G   H   + I
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVI 730



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 178/361 (49%), Gaps = 15/361 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I+   IK  +  +P +   L+  + K  D + A R  F+     D+I  + +IS  A+  
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA-RLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q+  A +LF RL    + P+ ++ SS+++AC ++ +    + +H   +K+G  S +++ +
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK  ++ S+   F    D + V++  +V G+  +G  +++  VF EM++  +  
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            + + ++VL A   +  ++   QIH    K  F +     + N++++ Y +CG   DA+K
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV--IGNSLIDTYAKCGYIRDALK 521

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D++SW+  I+         +A  LF  +  ++ + N+ T + LLS      +
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 292 LRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
           +  G  +  +     G    +     ++ + G+ G++NDA + I D      ++ W +++
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 350 A 350
           +
Sbjct: 642 S 642



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 29/304 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  IK GH  D  +   L+  + K  D   + +     ++ + +++N ++ G   F 
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVG---FS 441

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           QSG    AL +F  ++   +     T+SS+++AC    S++    +H    K  F++   
Sbjct: 442 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 501

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ YAK G I  A   F+  ++ D +++ A++ GY  +G+   + E+F  M    
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGF----------GVKVGFLSGVCNHLNNAIMNLYV 224
           +E N+ +  A+L  S     G   HG           G+K       C      I+ L  
Sbjct: 562 VESNDITFVALL--SVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC------IVRLLG 613

Query: 225 RCGQKLDAVKMFDEI-TEPDVVSWSERIAAACDGVE-AFGLFKDLRFNDFQINEYTMINL 282
           R G+  DA++   +I + P  + W   +++       A G F   +  + +  + T   L
Sbjct: 614 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 673

Query: 283 LSSV 286
           LS++
Sbjct: 674 LSNM 677


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 213/664 (32%), Positives = 344/664 (51%), Gaps = 16/664 (2%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   LK G +S              S  + +A   F +   LD  ++ +++  +V  G  
Sbjct: 23  HATLLKSGVTSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAH 82

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNN 217
             +  +   M   GL  N F+L + L ++  +     G Q+H   VK G    V +    
Sbjct: 83  PAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFS--AT 140

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQI 274
           A++++Y +CG+  DA ++FD + E + VSW+  +A   +      A  LF ++    F  
Sbjct: 141 ALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLP 200

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +E T   LL+ V          Q+     K G    + + NA I+ Y +CG + ++R IF
Sbjct: 201 DEATFAALLTVVNDSTCFLM-HQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIF 259

Query: 335 DYLIFK-DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKS 392
           D +  + D +SWN+M+  Y+ +G  ++A+  F  M+  S + P+ Y+  SI+ A +  + 
Sbjct: 260 DEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD 319

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA---LNESKRVLSEIDKKNAVHINAL 449
                 +H  + K+GF     + + LI  Y + +    + ++ +    +  K+ V  N++
Sbjct: 320 -HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSM 378

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +        A+AL  +R +       +   FS  L++C+ +  L  G+ IH L +++ +
Sbjct: 379 LTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGF 438

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             + FV S++I MY K G ++DA ++F +  + S   WN+MM GYAQHG    V +LFN+
Sbjct: 439 ASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQ 498

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M +  V  D IT++ ++T+C HAGLV E    L+ M   +G+  ++EHYAC +DL GR G
Sbjct: 499 MLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAG 558

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L+ AK  ID MP  PDA +W +LL AC ++GN++L     S LLE +P   STYVLLSN
Sbjct: 559 QLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSN 618

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +Y+  GMW+D   ++KEMK K L K PG+SWI V    H F A D SH +  EIY E++ 
Sbjct: 619 MYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIY-EMLS 677

Query: 750 LYEH 753
           L  H
Sbjct: 678 LLLH 681



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 274/551 (49%), Gaps = 29/551 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQ 61
           ++ L+K+G    P     L++ ++  +    A R LFD   R D  ++N+L++       
Sbjct: 23  HATLLKSGV-TSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGA 81

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A +L   +  +GL  + F   S +++  ++  + +   +H + +K G +  V+  + 
Sbjct: 82  HPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATA 141

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK G    A   F    + + V++ A+V GYV +G+   + ++FVEM   G   +
Sbjct: 142 LLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPD 201

Query: 179 EFSLTAVLGASFDVK--EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           E +  A+L    D       Q+HG  VK G   G+   + NA +  Y +CG   ++ ++F
Sbjct: 202 EATFAALLTVVNDSTCFLMHQLHGKIVKYGSALGLI--VLNAAITAYSQCGALANSRRIF 259

Query: 237 DEITE-PDVVSWSERIAA-ACDGV--EAFGLFKD-LRFNDFQINEYTMINLLSSVGGERI 291
           DEI +  D++SW+  + A A  G+  EA   F   +R +  Q + Y+  +++S+    R 
Sbjct: 260 DEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD 319

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ---VNDARSIFDYLIFKDSVSWNSM 348
              G  I     K GF  V  + NALI+MY +  +   + DA   FD L+ KD+VSWNSM
Sbjct: 320 -HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSM 378

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + GYS++G    AL  F  M   ++  + Y  ++ L + S+   L+   Q+H  +I+SGF
Sbjct: 379 LTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGF 438

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             ++ + S LI  Y K   L+++ +   E DK ++V  N++  +  YA  H +A +  R+
Sbjct: 439 ASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSM--MFGYAQ-HGKA-QAVRS 494

Query: 469 IWGSCREVNGS----TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDM 522
           ++    E+       TF  ++ AC+    +++G  I    +++RY   + +E  +  ID+
Sbjct: 495 LFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEI-LNTMESRYGIPLRMEHYACGIDL 553

Query: 523 YCKCGTIEDAK 533
           Y + G ++ AK
Sbjct: 554 YGRAGQLDKAK 564



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 220/454 (48%), Gaps = 21/454 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL +K G   +   +T L+  + K    R A R       R+ +++NAL++G     
Sbjct: 122 QLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESG 181

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLV-----KACGSLQENEIVHGVCLKLGFSSRVYL 115
           +  PA++LF  +  +G  PD  TF++L+       C  + +   +HG  +K G +  + +
Sbjct: 182 KVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFLMHQ---LHGKIVKYGSALGLIV 238

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSL 173
           ++  I  Y++ G + ++   F +  D  D +++ AM+  Y  +G   ++   F   MR+ 
Sbjct: 239 LNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRAS 298

Query: 174 GLELNEFSLTAVLGASFDVKE--GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL- 230
           G++ + +S T+++ A  + ++  G  IHG   K GF  GV  H+ NA++ +Y R  +   
Sbjct: 299 GVQPDMYSFTSIISACAEHRDHGGTVIHGLVSKNGF-EGV-THVCNALIAMYTRFSENCM 356

Query: 231 --DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA K FD +   D VSW+  +          +A   F+ ++  +   +EY     L S
Sbjct: 357 MEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRS 416

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                +LR G+QI     + GF     + ++LI MY K G ++DA   F+      SV W
Sbjct: 417 CSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPW 476

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHII 404
           NSM+ GY+++G       +F  MLE  +  +  T   ++ A S++  + +  ++ ++   
Sbjct: 477 NSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMES 536

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           + G  L     +C I  YG+   L+++K ++  +
Sbjct: 537 RYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSM 570


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 228/698 (32%), Positives = 370/698 (53%), Gaps = 21/698 (3%)

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFS-SRVYLVSG 118
           G AL  F  +   G R      S ++K CG + +    E +H +C+K GF  + V + + 
Sbjct: 82  GEALDHFVDVHRCG-RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTA 140

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G +    + F      + V +T+++ GYV          +F  MR+ G+  N
Sbjct: 141 LVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPN 200

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+ T+VL A      V  G ++H   VK G  S V   + N+++N+Y +CG   +A  +
Sbjct: 201 PFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTV--FVCNSLINMYSKCGLVEEAKAV 258

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F ++   D+VSW+  +A        +EA  LF D R +  ++++ T   ++      + L
Sbjct: 259 FRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQL 318

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAG 351
              +Q+ +   K GF    ++  A++  Y KCG+++DA +IF  +   ++ VSW +MI G
Sbjct: 319 ALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGG 378

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM-QVHSHIIKSGFLL 410
             +N     A  +F  M E ++ PN +T +++L A     S+   + Q+H+ IIK+ +  
Sbjct: 379 CIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA-----SIPILLPQIHAQIIKTNYQH 433

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
             S+ + L+ +Y K     E+  +   ID K+ V  +A+ S    A     A  ++  + 
Sbjct: 434 APSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMS 493

Query: 471 GSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
               + N  T S  + ACA+ T  ++QG+  H +++K RY   I V SA++ MY + G+I
Sbjct: 494 MQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSI 553

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + A+  F +     L  WN+M+ GYAQHG   E  + F +M   G++ D  T+LAV+  C
Sbjct: 554 DSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC 613

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGLV+E + Y   M   H + P +EHY+C+VDL  R G L+     I+ MP P  A +
Sbjct: 614 THAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMV 673

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W++LL AC ++ N++LG LA  KLL L+PD+ +TYVLLSN+YA+AG W +  ++RK M  
Sbjct: 674 WRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDS 733

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           K + KE G SWI +    H F A D SH  S++IY +L
Sbjct: 734 KKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKL 771



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 268/545 (49%), Gaps = 21/545 (3%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLAR 58
           Q++ L +K G     + + T L+  + K        R +F+    R+++T+ +L++G  +
Sbjct: 120 QLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDG-RVVFEGMPKRNVVTWTSLLTGYVQ 178

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
                  + LF R+R +G+ P+ FTF+S++ A    G++     VH   +K G  S V++
Sbjct: 179 GRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFV 238

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I  Y+K G +  A+  FR     D V++  ++ G + N    ++ ++F + R+   
Sbjct: 239 CNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMA 298

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +L++ + + V+    ++K+     Q+H   +K GF S    ++  AIM+ Y +CG+  DA
Sbjct: 299 KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSD--GNVMTAIMDAYSKCGELDDA 356

Query: 233 VKMFDEIT-EPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             +F  +    +VVSW+  I       +   A  LF  +R ++ + NE+T   +L++   
Sbjct: 357 FNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA--- 413

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             I     QI A   K  +    S+G AL++ Y K G   +A SIF  +  KD V+W++M
Sbjct: 414 -SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAM 472

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKSG 407
           ++ YS+ G  + A ++F  M    + PN +T++S ++A  S +  + Q  Q H+  IK  
Sbjct: 473 LSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYR 532

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           +     + S L+T Y +  +++ ++ V      ++ V  N++ S         EAL+ +R
Sbjct: 533 YQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFR 592

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKC 526
            +     E++G+TF  V+  C     +++G+     + +       +   S ++D+Y + 
Sbjct: 593 QMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRA 652

Query: 527 GTIED 531
           G +++
Sbjct: 653 GKLDE 657



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 127/249 (51%), Gaps = 8/249 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK  +   P + T L++ ++K  +   A        ++D++ ++A++S  ++  
Sbjct: 421 QIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAG 480

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
               A  +F ++  QG++P+ FT SS + AC S    + +    H + +K  +   + + 
Sbjct: 481 DCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVG 540

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  YA+ G I SA + F    D D V++ +M+ GY  +G   ++ + F +M ++G+E
Sbjct: 541 SALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIE 600

Query: 177 LNEFSLTAVL-GASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  +  AV+ G +    VKEG+Q     V    +S    H  + +++LY R G+  + +
Sbjct: 601 MDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY-SCMVDLYSRAGKLDETM 659

Query: 234 KMFDEITEP 242
            + + +  P
Sbjct: 660 NLIEGMPFP 668


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 222/772 (28%), Positives = 383/772 (49%), Gaps = 22/772 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ LL K G      ++  LI+ +++      A +       RD I++N+ ISG      
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              A+ LF ++  +G    + T  S++ AC  L      ++VHG  +K G    +  V  
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339

Query: 119 FIEN---------YAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFV 168
            I+          Y K G++ SA   F       NV  +  ++ GY    EF++S  +F 
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399

Query: 169 EMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +M  LG+  +E +L+ +L     +   ++G   HG+ VK+GF  G    + NA+++ Y +
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGF--GTQCAVCNALISFYAK 457

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINL 282
                +AV +FD +   D +SW+  I+    +G+  EA  LF  +     +++  T++++
Sbjct: 458 SNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSV 517

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +         G+ +  +  K G +   S+ NAL+ MY  C   +    IF  +  K+ 
Sbjct: 518 LPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNV 577

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSW +MI  Y+  G F++   +   M+   + P+ + + S+L   +  +SLKQ   VH +
Sbjct: 578 VSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGY 637

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            I++G      + + L+  Y  C  + E++ V   +  K+ +  N L       +   E+
Sbjct: 638 AIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANES 697

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
             L+  +    +  N  T + +L A A+++ LE+G+ IH  AL+  + +D +  +A++DM
Sbjct: 698 FSLFSDMLLQFKP-NTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDM 756

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG +  A+  F ++ + +L  W  M+ GY  HGC  +   LF +M   GV+PD  ++
Sbjct: 757 YVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASF 816

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
            A+L +CCH+GL  E   + + M   + + P+L+HY CIVDLL   G L+ A   I+ MP
Sbjct: 817 SAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMP 876

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           I PD+ IW SLL  C I+ ++ L      ++ +L+P+N   YVLL+N+YA A  W  V K
Sbjct: 877 IEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKK 936

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           L+ ++  + L +  G SWI V G  H F A + +H +   I + L  +   M
Sbjct: 937 LKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRM 988



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 175/727 (24%), Positives = 344/727 (47%), Gaps = 47/727 (6%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFD---TQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           +L   L+  + K  D   A R +FD    +  D+  + +L+S  A+       + LF ++
Sbjct: 131 VLGKRLVLAYLKCGDLGGA-RMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQM 189

Query: 73  RYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           +  G+ PDA   S ++K   + GS+ E E++HG+  KLG      + +  I  Y++ G +
Sbjct: 190 QCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCM 249

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
             A   F      D +++ + + GY  NG  D++ ++F +M S G E++  ++ +VL A 
Sbjct: 250 EDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPAC 309

Query: 190 FDVK---EGEQIHGFGVKVGFL-------SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            ++     G+ +HG+ +K G L       SG+   L + ++ +YV+CG    A ++FD +
Sbjct: 310 AELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAM 369

Query: 240 -TEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
            ++ +V  W+  +   A A +  E+  LF+ +       +E+ +  LL  +      R G
Sbjct: 370 PSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDG 429

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
                +  K+GF    ++ NALIS Y K   +++A  +FD +  +D++SWNS+I+G + N
Sbjct: 430 LVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSN 489

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  ++A+++F  M       +  T+ S+L A + S        VH + +K+G + + S+ 
Sbjct: 490 GLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLA 549

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y  C+  + + ++   + +KN V   A+ +    A        L+  + G  +E
Sbjct: 550 NALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAG-------LFDKVAGLLQE 602

Query: 476 -----VNGSTFSI--VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                +    F++  VL   A    L+QGK++H  A++   ++ + V +A+++MY  C  
Sbjct: 603 MVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRN 662

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E+A+  F  +    +  WN ++ GY+++   +E  +LF+ M     KP+ +T   +L +
Sbjct: 663 MEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILPA 721

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
                 +   R  +   +   G +        +VD+  + G L  A++  D++    +  
Sbjct: 722 VASISSLERGRE-IHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRL-TKKNLI 779

Query: 649 IWQSLLSACTIY--GNIDLGLLAGSKLLELQPDNESTYVLL-----SNLYASAGMWNDVG 701
            W  +++   ++  G   + L    +   ++PD  S   +L     S L A    W    
Sbjct: 780 SWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEG--WKFFN 837

Query: 702 KLRKEMK 708
            +RKE K
Sbjct: 838 AMRKEYK 844


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 215/691 (31%), Positives = 363/691 (52%), Gaps = 15/691 (2%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VH 101
           +++ + + I+  AR      AL  F ++   G+ P+A T+S+ + AC       +   +H
Sbjct: 5   NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
            + LK GFS+++++ SG I  Y+K   I  A   F D  + D+V++ +M+ GY   G  +
Sbjct: 65  CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNE 124

Query: 162 KSKEVFVEM----RSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNH 214
           ++  +F  M     +  L +++F+L  VL A   +   + G+ +HG+ VK+GF S +   
Sbjct: 125 EACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDL--F 182

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND 271
           ++ + + +Y +CG    A   FD+I   D+V+W+  I   A  C   EA  LF  +    
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+ N+ T   +L +         G+   A   K+G    V +  AL+ MY K   + D  
Sbjct: 243 FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVE 302

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
             F  +  ++ VS+N++I GYS  G + +AL ++  +    + P+ +T   +  + S S 
Sbjct: 303 RAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSS 362

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           ++ +  QVH H +K G   D S+ + ++  Y KC   + +      I++ N+V    + S
Sbjct: 363 TVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIIS 422

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    +AL  +  +     + +  + S V+KA ++   +EQG+ +H   +K+  D 
Sbjct: 423 GFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDC 482

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            I+V SAVIDMY KCG +EDA++ F  +   ++  WN+M+ GYAQ+G   E   LF +M+
Sbjct: 483 TIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMT 542

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             G+ P  +T++ +L +C HAGLV E R + + M   +G+ P +EH  C+VDLLGR G L
Sbjct: 543 SSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYL 602

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           E A+  +       +  IW SLLSAC ++ N D+G  A    L L+P   S+Y  LSN+Y
Sbjct: 603 EEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIY 662

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           AS  +W++V ++R  MK+  + KEPG SWI 
Sbjct: 663 ASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 233/445 (52%), Gaps = 14/445 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +K G   D  +S + +  + K      A       +N+DI+ +N +I+G A+ C 
Sbjct: 168 VHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCY 227

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A++LF ++  +G +P+  TF  ++KA  ++ ++ +    H   LKLG S  V++ + 
Sbjct: 228 EEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATA 287

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+K  +I   E  F +    + V++ A++ GY   G+++++  V+ +++S G+E +
Sbjct: 288 LVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPD 347

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+   +  +   S  V EG Q+H   VK G  S V   + N+I+N Y +CG    A++ 
Sbjct: 348 SFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDV--SVGNSIVNFYSKCGFTDSALEA 405

Query: 236 FDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ I  P+ V W+  I   A   +G +A   F  +R    + +E++  +++ +V     +
Sbjct: 406 FESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAV 465

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+ + A   K G    + +G+A+I MY KCG V DA+ +F  +  K+ VSWNSMI GY
Sbjct: 466 EQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGY 525

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           ++NGF  +AL +F  M    ++P   T   IL A S++  +++    ++ ++ + + +  
Sbjct: 526 AQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHN-YGIPP 584

Query: 413 SM--ISCLITTYGKCNALNESKRVL 435
           SM   +C++   G+   L E++  L
Sbjct: 585 SMEHCTCMVDLLGRAGYLEEAEAFL 609



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 280/549 (51%), Gaps = 22/549 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           ++ L++K G      +S+ LIS ++K    + A RFLFD    RD +++N++I+G ++  
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEA-RFLFDDMPERDDVSWNSMIAGYSQRG 121

Query: 61  QSGPALKLFDRL-----RYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSR 112
            +  A  LF  +      ++ L  D FT ++++KACG L  + I   VHG  +K+GF S 
Sbjct: 122 LNEEACGLFCSMINSCENWKLLVSD-FTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           +++    +  Y K G +  A + F    + D VA+  M+ GY  N   +++ E+F +M  
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G + N+ +   VL AS    D   G   H   +K+G    V   +  A++++Y +    
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDV--FVATALVDMYSKFYDI 298

Query: 230 LDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            D  + F E+++ ++VS++  I          EA  ++  L+    + + +T + L SS 
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G Q+     K G    VS+GN++++ Y KCG  + A   F+ +   +SV W 
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWA 418

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            +I+G+++NG   +AL  FC M +F    + ++ +S+++AVS+  +++Q   +H+H++KS
Sbjct: 419 GIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKS 478

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G      + S +I  Y KC  + ++++V S + +KN V  N++ +         EAL L+
Sbjct: 479 GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLF 538

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYC 524
           + +  S       TF  +L AC+    +E+G+  + L +   Y     +E  + ++D+  
Sbjct: 539 QEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVH-NYGIPPSMEHCTCMVDLLG 597

Query: 525 KCGTIEDAK 533
           + G +E+A+
Sbjct: 598 RAGYLEEAE 606



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 198/417 (47%), Gaps = 21/417 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           ++ ++K G  +D  ++T L+  ++KF D     R   +   R+++++NALI+G +   + 
Sbjct: 270 HAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKY 329

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             AL+++ +L+ +G+ PD+FTF  L  +C    ++ E   VH   +K G  S V + +  
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSI 389

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y+K G   SA   F      ++V +  ++ G+  NGE +K+   F +MR    + +E
Sbjct: 390 VNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDE 449

Query: 180 FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           FS ++V+ A      V++G  +H   +K G    +  ++ +A++++Y +CG   DA K+F
Sbjct: 450 FSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTI--YVGSAVIDMYSKCGMVEDAQKVF 507

Query: 237 DEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             + E +VVSW+  I   A +G   EA  LF+++  +       T + +L +     ++ 
Sbjct: 508 SVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVE 567

Query: 294 AGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIA- 350
            G+       +  G    +     ++ + G+ G + +A +      F K+   W S+++ 
Sbjct: 568 EGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSA 627

Query: 351 -GYSENGFFNQALDMFCHMLE------FSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
            G  +N          C  LE      ++ + N Y    +   VS  + L + M V 
Sbjct: 628 CGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVE 684


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 222/752 (29%), Positives = 384/752 (51%), Gaps = 21/752 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + T L+  + K      A +   +   RD++++NALISG         A+ LF  ++
Sbjct: 94  DVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMK 153

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVYLVSGFIENYAKSGEI 129
             GL P++ T  +L+ ACG + E  +   +HG CL+ G F    Y+ +  +  Y +   +
Sbjct: 154 KAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV 213

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
           +S  + F   L  + V++ A++ G++  G+  K+ +++  M   G++ +  ++  V+ A 
Sbjct: 214 LSHRV-FSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272

Query: 190 FD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
            +   ++ G Q+H   +K   ++ +   + NA++N+Y   G    +  +F+ +   D   
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDL--FILNALLNMYSDNGSLESSWALFNAVPTSDAAL 330

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYT---MINLLSSVGGERILRAGKQIQA 300
           W+  I++        EA  LF  +R    + +  T   M++L + +    I   G+ + A
Sbjct: 331 WNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW--GRGLHA 388

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              K G      +GNAL+SMY K  Q+  A+ +F+ +   D +SWN+MI+ ++++ F  +
Sbjct: 389 HAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAK 448

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           A ++F  M E  +  N YT+ S+L    +   L     +H   IK+G  ++ S+ + L  
Sbjct: 449 AFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTE 508

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y  C     +  + +   +++ V  N+L S  +      +AL L+  +     E N  T
Sbjct: 509 MYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISEL-EPNSVT 567

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              +L +C  +  L  G+ +H    +     + D  + +A I MY +CG ++ A++ F  
Sbjct: 568 IINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCT 627

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +   S+  WNAM+ GY  HG   + +  F +M   G KP+ +++ +VL++C H+GL    
Sbjct: 628 LQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTG 687

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
                 M    G+ PQL HY C+VDLLGR G    A   I+ MPI PDA IW++LLS+C 
Sbjct: 688 LQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I  N  L      KL+EL+P N   ++LLSN+YA+AG+W++V ++RK ++E+ L K PG 
Sbjct: 748 IKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGT 807

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           SWI +G   HHF A D  H QS+ IY+ L  L
Sbjct: 808 SWIVIGNQVHHFTATDVLHPQSERIYENLNSL 839



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 272/557 (48%), Gaps = 25/557 (4%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV----C 104
           +N++I    +       L  + ++   G+ PD+ T   ++KACG L  N I +GV    C
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRL--NAIGNGVRIHSC 85

Query: 105 LK-LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
           ++ L   + V + +  ++ Y K G +  A   F +  + D V++ A++ GYV    + ++
Sbjct: 86  IRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEA 145

Query: 164 KEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
             +FVEM+  GL  N  ++ A+L   G   +++ G++IHG+ ++ G    +  ++  A++
Sbjct: 146 VLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFD-MDAYVGTALV 204

Query: 221 NLYVRCGQKLDAV---KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQI 274
             Y+R     DAV   ++F  +   ++VSW+  I       D  +A  L+  +     + 
Sbjct: 205 GFYMR----FDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKF 260

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  TM+ ++ +      LR G Q+     K   +  + I NAL++MY   G +  + ++F
Sbjct: 261 DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALF 320

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS--NSKS 392
           + +   D+  WNSMI+ Y   GF  +A+ +F  M    +  +  T+A +L   +  N  S
Sbjct: 321 NAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGS 380

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           +     +H+H +KSG  LD  + + L++ Y K N +  ++ V  ++   + +  N + S 
Sbjct: 381 I-WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISA 439

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
              +   A+A EL+  +  S  + N  T   +L  C   +DL  G++IH  A+K   + +
Sbjct: 440 FAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEIN 499

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
             + +++ +MY  CG    A   F +  +  L  WN+++  Y ++    +   LFN M  
Sbjct: 500 TSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS 559

Query: 573 FGVKPDEITYLAVLTSC 589
             ++P+ +T + +LTSC
Sbjct: 560 -ELEPNSVTIINILTSC 575



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 163/315 (51%), Gaps = 3/315 (0%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           TM  +L + G    +  G +I +    +  +  V +G AL+  Y KCG V +A  +F  +
Sbjct: 62  TMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEM 121

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D VSWN++I+GY     + +A+ +F  M +  L PN  T+ ++L A      L+   
Sbjct: 122 PERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQ 181

Query: 398 QVHSHIIKSG-FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           ++H + +++G F +D  + + L+  Y + +A+  S RV S +  +N V  NA+ +  +  
Sbjct: 182 EIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNV 240

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
              A+AL+LY ++     + +  T  +V++ACA    L  G  +H LA+K     D+F+ 
Sbjct: 241 GDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFIL 300

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+++MY   G++E +   F  +     A WN+M+  Y   G + E   LF KM    +K
Sbjct: 301 NALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIK 360

Query: 577 PDEITYLAVLTSCCH 591
            D +  +A++ S C+
Sbjct: 361 ED-VRTIAIMLSLCN 374



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 164/350 (46%), Gaps = 6/350 (1%)

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           S  WNS+I  +++    +  L  +  M    + P+  TM  +L+A     ++   +++HS
Sbjct: 25  SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            I     + D  + + L+  Y KC  + E+ +V  E+ +++ V  NAL S  V   C+ E
Sbjct: 85  CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQDIFVESAVI 520
           A+ L+  +  +    N  T   +L AC  M +L  G+ IH   L+   +D D +V +A++
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
             Y +   +  + R F  +   ++  WNA++ G+   G   +   L++ M   G+K D +
Sbjct: 205 GFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T L V+ +C   G +R     L  ++    LI  L     ++++    G LE +    + 
Sbjct: 264 TMLVVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNA 322

Query: 641 MPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLS 688
           +P   DA +W S++S+   +G     + L    +L  ++ D  +  ++LS
Sbjct: 323 VP-TSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLS 371



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 153/355 (43%), Gaps = 12/355 (3%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K+G  LD  L   L+S + K      A       +  D+I++N +IS  A+      A 
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +LF  +    ++ +++T  SL+  C     L     +HG  +K G      L +   E Y
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G+  +A   F  C   D V++ +++  Y+ N    K+  +F  M S  LE N  ++ 
Sbjct: 511 INCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTII 569

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            +L +   +     G+ +H +  +      +   L NA + +Y RCG+   A K+F  + 
Sbjct: 570 NILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ 629

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
              +VSW+  I        G +A   F  +  + F+ N  +  ++LS+     +   G Q
Sbjct: 630 TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQ 689

Query: 298 I-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIA 350
           +  +     G    ++    ++ + G+ G  ++A +  + + I  D+  W ++++
Sbjct: 690 LFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLS 744



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 17/258 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   IKNG  ++  L+T+L   +    D R A         RD++++N+LIS   +   
Sbjct: 487 IHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDN 546

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-------VY 114
           +G AL LF+ +  + L P++ T  +++ +C  L    +  G CL    + R         
Sbjct: 547 AGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPL--GQCLHAYTTRREVSLEMDAS 603

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L + FI  YA+ G++  AE  F        V++ AM+ GY  +G    +   F +M   G
Sbjct: 604 LANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDG 663

Query: 175 LELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            + N  S  +VL A       V   +  H      G    + ++    +++L  R G   
Sbjct: 664 FKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHY--GCMVDLLGRGGHFS 721

Query: 231 DAVKMFDEIT-EPDVVSW 247
           +A+   + +  EPD   W
Sbjct: 722 EAIAFINSMPIEPDASIW 739


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 222/752 (29%), Positives = 384/752 (51%), Gaps = 21/752 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + T L+  + K      A +   +   RD++++NALISG         A+ LF  ++
Sbjct: 94  DVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMK 153

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVYLVSGFIENYAKSGEI 129
             GL P++ T  +L+ ACG + E  +   +HG CL+ G F    Y+ +  +  Y +   +
Sbjct: 154 KAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV 213

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
           +S  + F   L  + V++ A++ G++  G+  K+ +++  M   G++ +  ++  V+ A 
Sbjct: 214 LSHRV-FSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272

Query: 190 FD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
            +   ++ G Q+H   +K   ++ +   + NA++N+Y   G    +  +F+ +   D   
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDL--FILNALLNMYSDNGSLESSWALFNAVPTSDAAL 330

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYT---MINLLSSVGGERILRAGKQIQA 300
           W+  I++        EA  LF  +R    + +  T   M++L + +    I   G+ + A
Sbjct: 331 WNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW--GRGLHA 388

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              K G      +GNAL+SMY K  Q+  A+ +F+ +   D +SWN+MI+ ++++ F  +
Sbjct: 389 HAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAK 448

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           A ++F  M E  +  N YT+ S+L    +   L     +H   IK+G  ++ S+ + L  
Sbjct: 449 AFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTE 508

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y  C     +  + +   +++ V  N+L S  +      +AL L+  +     E N  T
Sbjct: 509 MYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISEL-EPNSVT 567

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              +L +C  +  L  G+ +H    +     + D  + +A I MY +CG ++ A++ F  
Sbjct: 568 IINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCT 627

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +   S+  WNAM+ GY  HG   + +  F +M   G KP+ +++ +VL++C H+GL    
Sbjct: 628 LQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTG 687

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
                 M    G+ PQL HY C+VDLLGR G    A   I+ MPI PDA IW++LLS+C 
Sbjct: 688 LQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I  N  L      KL+EL+P N   ++LLSN+YA+AG+W++V ++RK ++E+ L K PG 
Sbjct: 748 IKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGT 807

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           SWI +G   HHF A D  H QS+ IY+ L  L
Sbjct: 808 SWIVIGNQVHHFTATDVLHPQSERIYENLNSL 839



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 268/555 (48%), Gaps = 21/555 (3%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--NEI-VHGVCL 105
           +N++I    +       L  + ++   G+ PD+ T   ++KACG L    N + +H    
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
            L   + V + +  ++ Y K G +  A   F +  + D V++ A++ GYV    + ++  
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 166 VFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +FVEM+  GL  N  ++ A+L   G   +++ G++IHG+ ++ G    +  ++  A++  
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFD-MDAYVGTALVGF 206

Query: 223 YVRCGQKLDAV---KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINE 276
           Y+R     DAV   ++F  +   ++VSW+  I       D  +A  L+  +     + + 
Sbjct: 207 YMR----FDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDA 262

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            TM+ ++ +      LR G Q+     K   +  + I NAL++MY   G +  + ++F+ 
Sbjct: 263 VTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNA 322

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS--NSKSLK 394
           +   D+  WNSMI+ Y   GF  +A+ +F  M    +  +  T+A +L   +  N  S+ 
Sbjct: 323 VPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI- 381

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
               +H+H +KSG  LD  + + L++ Y K N +  ++ V  ++   + +  N + S   
Sbjct: 382 WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFA 441

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
            +   A+A EL+  +  S  + N  T   +L  C   +DL  G++IH  A+K   + +  
Sbjct: 442 QSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTS 501

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           + +++ +MY  CG    A   F +  +  L  WN+++  Y ++    +   LFN M    
Sbjct: 502 LNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-E 560

Query: 575 VKPDEITYLAVLTSC 589
           ++P+ +T + +LTSC
Sbjct: 561 LEPNSVTIINILTSC 575



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 164/315 (52%), Gaps = 3/315 (0%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           TM  +L + G    +  G +I +F   +  +  V +G AL+  Y KCG V +A  +F  +
Sbjct: 62  TMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEM 121

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D VSWN++I+GY     + +A+ +F  M +  L PN  T+ ++L A      L+   
Sbjct: 122 PERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQ 181

Query: 398 QVHSHIIKSG-FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           ++H + +++G F +D  + + L+  Y + +A+  S RV S +  +N V  NA+ +  +  
Sbjct: 182 EIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNV 240

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
              A+AL+LY ++     + +  T  +V++ACA    L  G  +H LA+K     D+F+ 
Sbjct: 241 GDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFIL 300

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+++MY   G++E +   F  +     A WN+M+  Y   G + E   LF KM    +K
Sbjct: 301 NALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIK 360

Query: 577 PDEITYLAVLTSCCH 591
            D +  +A++ S C+
Sbjct: 361 ED-VRTIAIMLSLCN 374



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 164/350 (46%), Gaps = 6/350 (1%)

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           S  WNS+I  +++    +  L  +  M    + P+  TM  +L+A     ++   +++HS
Sbjct: 25  SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            I     + D  + + L+  Y KC  + E+ +V  E+ +++ V  NAL S  V   C+ E
Sbjct: 85  FIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQDIFVESAVI 520
           A+ L+  +  +    N  T   +L AC  M +L  G+ IH   L+   +D D +V +A++
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
             Y +   +  + R F  +   ++  WNA++ G+   G   +   L++ M   G+K D +
Sbjct: 205 GFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T L V+ +C   G +R     L  ++    LI  L     ++++    G LE +    + 
Sbjct: 264 TMLVVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNA 322

Query: 641 MPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLS 688
           +P   DA +W S++S+   +G     + L    +L  ++ D  +  ++LS
Sbjct: 323 VP-TSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLS 371



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 153/355 (43%), Gaps = 12/355 (3%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K+G  LD  L   L+S + K      A       +  D+I++N +IS  A+      A 
Sbjct: 391 MKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAF 450

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +LF  +    ++ +++T  SL+  C     L     +HG  +K G      L +   E Y
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G+  +A   F  C   D V++ +++  Y+ N    K+  +F  M S  LE N  ++ 
Sbjct: 511 INCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTII 569

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            +L +   +     G+ +H +  +      +   L NA + +Y RCG+   A K+F  + 
Sbjct: 570 NILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ 629

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
              +VSW+  I        G +A   F  +  + F+ N  +  ++LS+     +   G Q
Sbjct: 630 TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQ 689

Query: 298 I-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIA 350
           +  +     G    ++    ++ + G+ G  ++A +  + + I  D+  W ++++
Sbjct: 690 LFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLS 744



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 17/258 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   IKNG  ++  L+T+L   +    D R A         RD++++N+LIS   +   
Sbjct: 487 IHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDN 546

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-------VY 114
           +G AL LF+ +  + L P++ T  +++ +C  L    +  G CL    + R         
Sbjct: 547 AGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPL--GQCLHAYTTRREVSLEMDAS 603

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L + FI  YA+ G++  AE  F        V++ AM+ GY  +G    +   F +M   G
Sbjct: 604 LANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDG 663

Query: 175 LELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            + N  S  +VL A       V   +  H      G    + ++    +++L  R G   
Sbjct: 664 FKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHY--GCMVDLLGRGGHFS 721

Query: 231 DAVKMFDEIT-EPDVVSW 247
           +A+   + +  EPD   W
Sbjct: 722 EAIAFINSMPIEPDASIW 739


>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
 gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/691 (29%), Positives = 368/691 (53%), Gaps = 20/691 (2%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEI 99
           +RD++++  ++S   +  +   AL +F  +   G  P+ FTFSS+++AC +L E    + 
Sbjct: 3   SRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKC 62

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +HG  +K GF S   L S  I+ Y+K G I  A   F    + D V++T M+   V  G+
Sbjct: 63  IHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGK 122

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGAS--FDVKEGEQIHG----FGVKVGFLSGVCN 213
           + ++  ++++M   G+  NEF+   VL A+    +K G+ +H     FGV++  +     
Sbjct: 123 WSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKHGKVVHAHLIVFGVELNLV----- 177

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFN 270
            +  A++++Y +C +  DAV++     E D   W+  ++     +   EA   F+++  +
Sbjct: 178 -VKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEAS 236

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG-QVND 329
               N +T +++L++      L  G+QI A     G  + + +GNAL+ MY KC  +V D
Sbjct: 237 GILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVED 296

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
              +F+ +   D +SW S+IAG SE+GF   + D +  M    L PN  T++ IL +   
Sbjct: 297 GLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRA 356

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           +KS  Q +++H H+IK+    D ++ + L+  Y     ++++  ++  + +++A+    L
Sbjct: 357 AKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGL 416

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           A+ L     H  AL +   ++    +++G + +  L A A +  +E G  +H  ++K+  
Sbjct: 417 ATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGL 476

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
              I V + ++  Y KCG   DA+RAF +I    +  WN ++   A +G      + F+ 
Sbjct: 477 GSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDD 536

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M   GVKPD +T+L VL +C H GLV     Y + M ++HG+ PQL+HY C+ DLLGR G
Sbjct: 537 MRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLGRAG 596

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            LE A   ++ MPI P+A I+++LL+AC ++  + LG    S+ L+L P + +  ++L+N
Sbjct: 597 RLEEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDPAFNLMLAN 656

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           LY S+G  +    +R+ +++K     P  SW
Sbjct: 657 LYDSSGRPDLAATIRRSVRDKG-SSLPQRSW 686



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 123/498 (24%), Positives = 242/498 (48%), Gaps = 15/498 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  +IK+G   + IL + LI  ++K+     A R     +N D++++  +IS L +  +
Sbjct: 63  IHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGK 122

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG--SLQENEIVHGVCLKLGFSSRVYLVSGF 119
              AL+++  +   G+ P+ FTF  ++ A G   L+  ++VH   +  G    + + +  
Sbjct: 123 WSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKHGKVVHAHLIVFGVELNLVVKTAL 182

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y+K   +  A    +   + D   +TA++ G   N +  ++   F EM + G+  N 
Sbjct: 183 VHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGILSNN 242

Query: 180 FSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAV 233
           F+  ++L A     S D+  G QIH   +  G    +   + NA++++Y++C  ++ D +
Sbjct: 243 FTYLSILNACSLILSLDL--GRQIHARVIMAGLEDDIP--VGNALVDMYMKCSHEVEDGL 298

Query: 234 KMFDEITEPDVVSWSERIAAACD-GVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ I  PDV+SW+  IA   + G    +F  + ++  +  Q N  T+  +L S    +
Sbjct: 299 RVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAK 358

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
                 ++     K      +++ NAL+  Y    +V+DA  +   +  +D++++  +  
Sbjct: 359 SASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLAT 418

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
             ++ G    AL +  HM    +  +GY+MA  L A +   S++  MQ+HS+ +KSG   
Sbjct: 419 RLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGS 478

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
             S+ + L++ YGKC    +++R  +EI + + V  N L SVL      + AL  +  + 
Sbjct: 479 SISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMR 538

Query: 471 GSCREVNGSTFSIVLKAC 488
            +  + +  TF +VL  C
Sbjct: 539 LTGVKPDSVTFLLVLFTC 556



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 78/189 (41%), Gaps = 3/189 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IK     D  +S  L+  +        A+  + +   RD +TY  L + L +  
Sbjct: 365 KLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMG 424

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL + + +    ++ D ++ +  + A   L   E    +H   +K G  S + + +
Sbjct: 425 HHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSN 484

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  Y K G    AE  F +  + D V++  ++      G    +   F +MR  G++ 
Sbjct: 485 GLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKP 544

Query: 178 NEFSLTAVL 186
           +  +   VL
Sbjct: 545 DSVTFLLVL 553



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 49/91 (53%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S  +K+G      +S  L+S + K    R A R   + +  DI+++N LIS LA + 
Sbjct: 466 QLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYG 525

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL  FD +R  G++PD+ TF  ++  C
Sbjct: 526 HISSALSAFDDMRLTGVKPDSVTFLLVLFTC 556


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 211/662 (31%), Positives = 347/662 (52%), Gaps = 11/662 (1%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H + +  G    +++ +  +  YA  G++  +   F      D   + +M+  YV NG 
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 160 FDKSKEVFVEMRSLG-LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           F ++   F ++  +  +  + ++   VL A   + +G +IH +  K+GF   V   +  +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNV--FVAAS 255

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQIN 275
           ++++Y R G    A  +FD++   D+ SW+  I+      +  +A  +  ++R    ++N
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
             T++++L        +     I  +  K G    + + NALI+MY K G + DAR  F 
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +   D VSWNS+IA Y +N     A   F  M      P+  T+ S+   V+ S+  K 
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435

Query: 396 AMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  VH  I++ G+L++D +I + ++  Y K   L+ + +V   I  K+ +  N L +   
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYA 495

Query: 455 YASCHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                +EA+E+Y+ +   C+E+  N  T+  +L A A +  L+QG  IH   +K     D
Sbjct: 496 QNGLASEAIEVYKMM-EECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLD 554

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           +FV + +ID+Y KCG + DA   F ++ ++S   WNA++  +  HG   +   LF +M  
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GVKPD +T++++L++C H+G V E +     M + +G+ P L+HY C+VDLLGR G LE
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLE 673

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I  MP+ PDA IW +LL AC I+GNI+LG  A  +L E+   N   YVLLSN+YA
Sbjct: 674 MAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYA 733

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + G W  V K+R   +E+ L K PG+S I V      FY G+ SH + KEIY+EL  L  
Sbjct: 734 NVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTA 793

Query: 753 HM 754
            M
Sbjct: 794 KM 795



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 166/570 (29%), Positives = 293/570 (51%), Gaps = 18/570 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           +++LL+  G      +ST L++ +    D   + R  FD    +D+ T+N++IS      
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLS-RCTFDQIPQKDVYTWNSMISAYVHNG 196

Query: 61  QSGPALKLFDRLRY-QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
               A+  F +L     +RPD +TF  ++KACG+L +   +H    KLGF   V++ +  
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASL 256

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y++ G    A   F D    D  ++ AM+ G + NG   ++ +V  EMR  G+++N 
Sbjct: 257 IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNF 316

Query: 180 FSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++ ++L       D+     IH + +K G    +   ++NA++N+Y + G   DA K F
Sbjct: 317 VTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL--FVSNALINMYAKFGNLEDARKAF 374

Query: 237 DEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            ++   DVVSW+  IAA     D V A G F  ++ N FQ +  T+++L S V   R  +
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 294 AGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             + +  F  + G+ ME V IGNA++ MY K G ++ A  +F+ ++ KD +SWN++I GY
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494

Query: 353 SENGFFNQALDMFCHMLE-FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++NG  ++A++++  M E   +IPN  T  SIL A ++  +L+Q M++H  +IK+   LD
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLD 554

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + +CLI  YGKC  L ++  +  ++ ++++V  NA+ S         + L+L+  +  
Sbjct: 555 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 614

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
              + +  TF  +L AC+    +E+GK   C  L   Y     ++    ++D+  + G +
Sbjct: 615 EGVKPDHVTFVSLLSACSHSGFVEEGKW--CFRLMQEYGIKPSLKHYGCMVDLLGRAGYL 672

Query: 530 EDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           E A    + +     A  W A++     HG
Sbjct: 673 EMAYGFIKDMPLQPDASIWGALLGACRIHG 702



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 215/441 (48%), Gaps = 17/441 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+    K G   +  ++ +LI  +++F  F    R LFD    RD+ ++NA+ISGL + 
Sbjct: 236 RIHCWAFKLGFQWNVFVAASLIHMYSRFG-FTGIARSLFDDMPFRDMGSWNAMISGLIQN 294

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             +  AL + D +R +G++ +  T  S++  C   G +    ++H   +K G    +++ 
Sbjct: 295 GNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVS 354

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  YAK G +  A   F+     D V++ +++  Y  N +   +   FV+M+  G +
Sbjct: 355 NALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQ 414

Query: 177 ---LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              L   SL +++  S D K    +HGF ++ G+L      + NA++++Y + G    A 
Sbjct: 415 PDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV-IGNAVVDMYAKLGLLDSAH 473

Query: 234 KMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           K+F+ I   DV+SW+  I        A + +E + + ++ +  +   N+ T +++L +  
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK--EIIPNQGTWVSILPAYA 531

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L+ G +I     K      V +   LI +YGKCG++ DA S+F  +  + SV+WN+
Sbjct: 532 HVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 591

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I+ +  +G   + L +F  ML+  + P+  T  S+L A S+S  +++       + + G
Sbjct: 592 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYG 651

Query: 408 FLLDDSMISCLITTYGKCNAL 428
                    C++   G+   L
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYL 672



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 190/404 (47%), Gaps = 7/404 (1%)

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            K + A     G ++ + I   L+++Y   G V+ +R  FD +  KD  +WNSMI+ Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 355 NGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           NG F++A+  F  +L  S I P+ YT   +L+A     +L    ++H    K GF  +  
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVF 251

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + LI  Y +      ++ +  ++  ++    NA+ S L+     A+AL++   +    
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            ++N  T   +L  C  + D+     IH   +K   + D+FV +A+I+MY K G +EDA+
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           +AF+++    +  WN+++  Y Q+         F KM   G +PD +T +++ +    + 
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
             + +R+    +     L+  +     +VD+  ++GLL+ A    + + +  D   W +L
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILV-KDVISWNTL 490

Query: 654 LSACTIYGNIDLGLLAGSKLLELQP--DNESTYVLLSNLYASAG 695
           ++     G     +     + E +    N+ T+V +   YA  G
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVG 534


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/569 (34%), Positives = 312/569 (54%), Gaps = 15/569 (2%)

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           AS  +  G Q+HG  +K+GF  G    L N ++++Y +CG+   A ++F  + E +VVSW
Sbjct: 16  ASSAIHGGAQLHGALLKLGF--GSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSW 73

Query: 248 SERIAA---ACDGVEAFGLFKDLR-FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           +  +       D  E   L   +R  +D   NE+T+   L + G    + AG  I   C 
Sbjct: 74  TALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACV 133

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           + GF     + N+L+ +Y K G++ DAR +FD  +F++ V+WN+MI+GY+  G    +L 
Sbjct: 134 RAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLL 193

Query: 364 MFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--S 416
           +F  M      E    P+ +T AS+L+A  +  + ++  QVH+ ++  G     + I   
Sbjct: 194 VFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAG 253

Query: 417 CLITTYGKCNAL-NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
            L+  Y KC  L   + +V + +++KNA+    +           EA+EL+   W S   
Sbjct: 254 ALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVR 313

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +G   S V+   A    +EQG+ +HC  +K     D+ V +++IDMY KCG  ++A R 
Sbjct: 314 ADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARR 373

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           FR++   ++  W AM+ G  +HG   E  ++F +M   GV+PDE+ YLA+L++C H+GLV
Sbjct: 374 FREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLV 433

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            E R Y S +     L P+ EHYAC+VDLLGR G L  AK  +  MP+ P   +WQ+LLS
Sbjct: 434 EECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLS 493

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++ N+ +G  AG  LL +  DN   YV+LSN++A AG W +  ++R  M+ + L K+
Sbjct: 494 ACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQ 553

Query: 716 PGYSWIHVGGYTHHFY-AGDSSHSQSKEI 743
            G SW+ VG   H FY  GD SH ++ +I
Sbjct: 554 GGCSWVEVGKEAHFFYGGGDDSHPRAADI 582



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 217/463 (46%), Gaps = 17/463 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  L+K G   D +L   LI  + K  + R A         R+++++ AL+ G  R  
Sbjct: 25  QLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHG 84

Query: 61  QSGPALKLFDRLR-YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
            +   L+L   +R    + P+ FT S+ +KACG    +     +HG C++ GF     + 
Sbjct: 85  DARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVA 144

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y+K G I  A   F   +  + V + AM+ GY   G    S  VF EM+    E
Sbjct: 145 NSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQE 204

Query: 177 -----LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
                 +EF+  ++L   G+    +EG Q+H   V  G  +     L  A++++YV+C  
Sbjct: 205 EEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRC 264

Query: 229 KLD-AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLS 284
            L  A+++F+ + + + + W+  I   A +G   EA  LF     +  + + + + +++ 
Sbjct: 265 LLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVG 324

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                 ++  G+Q+  +  K      VS+ N+LI MY KCG  ++A   F  +  ++ VS
Sbjct: 325 VFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVS 384

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W +MI G  ++G   +A+ MF  M    + P+     ++L A S+S  +++  +  S I 
Sbjct: 385 WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIR 444

Query: 405 KSGFLLDDS-MISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
               L   +   +C++   G+   L+E+K +++ +     V +
Sbjct: 445 HDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGV 487



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 229/455 (50%), Gaps = 28/455 (6%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +HG  LKLGF S   L +  I+ YAK GE+  A   F    + + V++TA++ G++ +G+
Sbjct: 26  LHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGD 85

Query: 160 FDKSKEVFVEMRSLG-LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNH- 214
             +   +   MRSL  +  NEF+L+A L   G   D+  G  IHG  V+ GF     +H 
Sbjct: 86  ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEG---HHV 142

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFN- 270
           + N+++ LY + G+  DA ++FD     ++V+W+  I   A A  G ++  +F++++   
Sbjct: 143 VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRR 202

Query: 271 ----DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS--IGNALISMYGKC 324
               D Q +E+T  +LL + G     R G Q+ A     G     +  +  AL+ MY KC
Sbjct: 203 QEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKC 262

Query: 325 G-QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
              +  A  +F+ L  K+++ W ++I G+++ G   +A+++F       +  +G+ ++S+
Sbjct: 263 RCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSV 322

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           +   ++   ++Q  QVH + +K+   LD S+ + LI  Y KC   +E+ R   E+  +N 
Sbjct: 323 VGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNV 382

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK----A 499
           V   A+ + L       EA+ ++  +     E +   +  +L AC+    +E+ +    A
Sbjct: 383 VSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSA 442

Query: 500 I-HCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           I H   L+ R +      + ++D+  + G + +AK
Sbjct: 443 IRHDRRLRPRAEH----YACMVDLLGRAGELSEAK 473



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/422 (21%), Positives = 191/422 (45%), Gaps = 15/422 (3%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + ++L +      +  G Q+     K+GF     +GN LI MY KCG++  A  +F  + 
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAM 397
            ++ VSW +++ G+  +G   + L +   M   S + PN +T+++ L+A      +   +
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
            +H   +++GF     + + L+  Y K   + +++RV      +N V  NA+ S   +A 
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 458 CHAEALELYRTIWGSCREVNGS-----TFSIVLKACAAMTDLEQGKAIHCLAL--KARYD 510
              ++L ++R +    +E         TF+ +LKAC ++    +G  +H   +       
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 511 QDIFVESAVIDMYCKCG-TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
            +  +  A++DMY KC   +  A + F ++ + +   W  +++G+AQ G   E   LF +
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
               GV+ D     +V+       LV + R  +   +    GL   + +   ++D+  + 
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVAN--SLIDMYHKC 364

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVL 686
           GL + A     ++P   +   W ++++    +G+    + +    +   ++PD  +   L
Sbjct: 365 GLTDEAARRFREVP-ARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLAL 423

Query: 687 LS 688
           LS
Sbjct: 424 LS 425


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 226/739 (30%), Positives = 378/739 (51%), Gaps = 21/739 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLF-DR 71
           D +L T +I+ +        + RF+FD  +++++  +NA+IS  +R       L+ F + 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDS-RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +    L PD FT+  ++KAC  + +  I   VHG+ +K G    V++ +  +  Y   G 
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS----KEVFVEMRSLGLELNEFSLTA 184
           +  A   F    + + V++ +M+  +  NG  ++S     E+  E        +  +L  
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297

Query: 185 VLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           VL      +E   G+ +HG+ VK+     +   LNNA+M++Y +CG   +A  +F     
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELV--LNNALMDMYSKCGCITNAQMIFKMNNN 355

Query: 242 PDVVSWSERIAAACDGVEAFGLFKDLRF-----NDFQINEYTMINLLSSVGGERILRAGK 296
            +VVSW+  +       +  G F  LR       D + +E T++N +     E  L + K
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           ++  +  K  F+    + NA ++ Y KCG ++ A+ +F  +  K   SWN++I G++++ 
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
               +LD    M    L+P+ +T+ S+L A S  KSL+   +VH  II++    D  +  
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            +++ Y  C  L   + +   ++ K+ V  N + +  +       AL ++R +     ++
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
            G +   V  AC+ +  L  G+  H  ALK   + D F+  ++IDMY K G+I  + + F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
             +   S A WNAM+MGY  HG   E   LF +M + G  PD++T+L VLT+C H+GL+ 
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA-KMTIDQMPIPPDAHIWQSLLS 655
           E   YL  M    GL P L+HYAC++D+LGR G L+ A ++  ++M    D  IW+SLLS
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           +C I+ N+++G    +KL EL+P+    YVLLSNLYA  G W DV K+R+ M E  L K+
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835

Query: 716 PGYSWIHVGGYTHHFYAGD 734
            G SWI +      F  G+
Sbjct: 836 AGCSWIELNRKVFSFVVGE 854



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 295/638 (46%), Gaps = 48/638 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L++K G   D  +   L+S +        A +       R+++++N++I   +    
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268

Query: 62  SGPALKLFDRLRYQ----GLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSR 112
           S  +  L   +  +       PD  T  +++  C   +E EI     VHG  +KL     
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA--REREIGLGKGVHGWAVKLRLDKE 326

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           + L +  ++ Y+K G I +A+M F+   + + V++  MV G+   G+   + +V  +M +
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386

Query: 173 LG--LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHL-NNAIMNLYVRC 226
            G  ++ +E ++   +   F    +   +++H + +K  F   V N L  NA +  Y +C
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF---VYNELVANAFVASYAKC 443

Query: 227 GQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
           G    A ++F  I    V SW+  I   A + D   +      ++ +    + +T+ +LL
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S+    + LR GK++  F  +      + +  +++S+Y  CG++   +++FD +  K  V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SWN++I GY +NGF ++AL +F  M+ + +   G +M  +  A S   SL+   + H++ 
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623

Query: 404 IKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           +K   L DD+ I+C LI  Y K  ++ +S +V + + +K+    NA+           EA
Sbjct: 624 LKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682

Query: 463 LELYRTIWGSCREVNGSTFSIVLKAC-------AAMTDLEQGKAIHCLALKARYDQDIFV 515
           ++L+  +  +    +  TF  VL AC         +  L+Q K+   L    ++      
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH------ 736

Query: 516 ESAVIDMYCKCGTIEDAKRAF-RKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            + VIDM  + G ++ A R    ++  ++  G W +++     H        +  K+  F
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL--F 794

Query: 574 GVKPDEITYLAVLTSCCHAGL-----VREARTYLSCMS 606
            ++P++     VL S  +AGL     VR+ R  ++ MS
Sbjct: 795 ELEPEKPENY-VLLSNLYAGLGKWEDVRKVRQRMNEMS 831



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             ++L+A     D+E G+ IH L +   R   D  + + +I MY  CG+ +D++  F  +
Sbjct: 87  LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSC 589
              +L  WNA++  Y+++  Y EV   F +M S   + PD  TY  V+ +C
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 211/670 (31%), Positives = 358/670 (53%), Gaps = 11/670 (1%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           G L   + +H    KLG+ +  +  +  +  Y K  ++  A+  F + L  + + +T ++
Sbjct: 92  GDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLI 151

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFL 208
            G++   + +    +  EM  +G E NE + + +L A   ++    GEQIHGF +K GF 
Sbjct: 152 KGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFD 211

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV----VSWSERIAAACDGVEAFGLF 264
             V   +  +++++Y RCG    A K++  +   DV       SE   A C G +A G+F
Sbjct: 212 EDV--FVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGC-GEKAIGVF 268

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
             L  +  + N+YT  N++S+  G+  +   + +   C K G  + +S+GNA++S+Y K 
Sbjct: 269 LHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKH 328

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G + +A   F  +  ++ VSW ++++GY +NG   +AL+ F  +LE  +  +    A++L
Sbjct: 329 GMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLL 388

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +  S  K+L   +Q+H  ++K G++ D S+ + LI  Y KC  L  ++ V   +  KN V
Sbjct: 389 DGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIV 448

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             NA+ S  + A    +A+ L+  +  +  + +  TF+ +L   A    L +GK +H   
Sbjct: 449 SFNAILSGYIGAD-EEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYI 507

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K  ++ +  V +AVI MY KCG+I DA + F  +       WNA++  YA HG   +  
Sbjct: 508 IKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKAL 567

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF +M K    PDEIT L+VL +C ++GL+ E     + M   +G+ P++EH+AC+VDL
Sbjct: 568 ILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDL 627

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR G L  A   I++ P      +W++L+  C ++G+++ G +A   LL+L P+   +Y
Sbjct: 628 LGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSY 687

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           +L+SNLYA  GM N+  ++R  M +  + KE G SWI +    H F A D  H +SKEIY
Sbjct: 688 ILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHPESKEIY 747

Query: 745 KELIKLYEHM 754
            +L  L   M
Sbjct: 748 AKLDLLKSEM 757



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 229/440 (52%), Gaps = 11/440 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK G   D  + T+LIS +++  D   A +   +   +D+   N +IS   +  
Sbjct: 200 QIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAG 259

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
               A+ +F  L   GL P+ +TF++++ AC    + E   ++HG+C+K G    + + +
Sbjct: 260 CGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGN 319

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G +  AE  F    + + V++TA++ GYV NG   K+ E F ++  LG+  
Sbjct: 320 AIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGF 379

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +      +L    + K    G QIHGF VK+G++  V   +  A+++LY +C +   A  
Sbjct: 380 DSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDV--SVGTALIDLYAKCRKLRSARL 437

Query: 235 MFDEITEPDVVSWSERIAA--ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           +F  + + ++VS++  ++     D  +A  LF  LR  D + +  T   LLS    +  L
Sbjct: 438 VFHSLLDKNIVSFNAILSGYIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACL 497

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK + A+  K GF    S+GNA+I+MY KCG + DA  +F  + + DS+SWN++I+ Y
Sbjct: 498 VKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAY 557

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSGFLLD 411
           + +G   +AL +F  M +   +P+  T+ S+L+A S S  L++   + + +  K G   +
Sbjct: 558 ALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPE 617

Query: 412 DSMISCLITTYGKCNALNES 431
               +C++   G+   L+E+
Sbjct: 618 IEHFACMVDLLGRAGYLSEA 637



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 200/403 (49%), Gaps = 6/403 (1%)

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            S D+  G+ IH F  K+G+ +       N ++NLY +  +  DA  +FDE+   + ++W
Sbjct: 90  GSGDLMLGQAIHAFLAKLGYQNDAFR--GNNLVNLYGKFNKLGDAQSVFDEMLVRNTITW 147

Query: 248 SERIAA--ACDGVEA-FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I      + VE+ F + +++ +   + NE+T   +L +      L  G+QI  F  K
Sbjct: 148 TTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIK 207

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            GF E V +G +LISMY +CG +  A  ++  L +KD    N MI+ Y + G   +A+ +
Sbjct: 208 RGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGV 267

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F H+L   L PN YT  +++ A +    ++    +H   IK G   + S+ + +++ Y K
Sbjct: 268 FLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVK 327

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
              L E+++    + ++N V   AL S  V      +ALE +  I       +   F+ +
Sbjct: 328 HGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATL 387

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L  C+   +L  G  IH   +K  Y  D+ V +A+ID+Y KC  +  A+  F  +   ++
Sbjct: 388 LDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNI 447

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
             +NA++ GY       +   LF+++    +KPD +T+  +L+
Sbjct: 448 VSFNAILSGYIGAD-EEDAMALFSQLRLADIKPDSVTFARLLS 489



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 216/425 (50%), Gaps = 25/425 (5%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N++  +  +S   G+ +L  G+ I AF  K+G+      GN L+++YGK  ++ DA+S+F
Sbjct: 79  NDWPQLLQISIGSGDLML--GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVF 136

Query: 335 DYLIFKDSVSWNSMIAGYSE----NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           D ++ +++++W ++I G+ +       F  A +M+    EF    N +T + IL+A  + 
Sbjct: 137 DEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEF----NEHTCSVILQACDSL 192

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           ++L +  Q+H  +IK GF  D  + + LI+ Y +C  L  +++V S +  K+   +N + 
Sbjct: 193 ENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMI 252

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S    A C  +A+ ++  + GS  E N  TF+ V+ AC    D+E  + +H + +K    
Sbjct: 253 SEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCG 312

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            +I V +A++ +Y K G +E+A+++F  +   +L  W A++ GY ++G   +    F+++
Sbjct: 313 DEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQI 372

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ACIVDL 624
            + GV  D   +  +L  C       E +  L     +HG + +L +         ++DL
Sbjct: 373 LELGVGFDSCCFATLLDGC------SECKN-LGLGLQIHGFVVKLGYVHDVSVGTALIDL 425

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID-LGLLAGSKLLELQPDNEST 683
             +   L  A++    + +  +   + ++LS        D + L +  +L +++PD+ + 
Sbjct: 426 YAKCRKLRSARLVFHSL-LDKNIVSFNAILSGYIGADEEDAMALFSQLRLADIKPDSVTF 484

Query: 684 YVLLS 688
             LLS
Sbjct: 485 ARLLS 489


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 228/726 (31%), Positives = 380/726 (52%), Gaps = 62/726 (8%)

Query: 83  TFSSLVK----ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           TF SL+     +C S +  E+ H   +K GF   ++L +  I  Y + G++ SA+  F +
Sbjct: 101 TFESLINRYQGSCCSEEAREL-HLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDE 159

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-----VK 193
             + + V +  ++ GY  NG+ D++   F +M   G   N ++  + L A  +      K
Sbjct: 160 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 219

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC-GQKLDAVKMFDEITEPDVVSWSERIA 252
            G QIHG   K  + S V   + N ++++Y  C     DA  +FD I   + +SW+  I+
Sbjct: 220 LGVQIHGLISKTRYGSDVV--VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 277

Query: 253 AAC---DGVEAFGLFKDLRFN----DFQINE-YTMINLLSSVGGERILRAGKQIQAFCYK 304
                 D V A+ LF  ++       F+ N+ ++  ++L     E   R G+++ A   +
Sbjct: 278 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVL-----EEGRRKGREVHAHVIR 332

Query: 305 VGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
            G  +  V+IGN L++MY K G + DA S+F+ ++ KDSVSWNS+I+G  +N     A +
Sbjct: 333 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 392

Query: 364 MFCHMLEF---------------------------SLIPNGY-----TMASILEAVSNSK 391
           MF  M E+                            ++  G+     T  +IL AVS+  
Sbjct: 393 MFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLS 452

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALA 450
             + + Q+H+ ++K     D ++ + L++ YGKC  +NE +++ + + + ++ V  N++ 
Sbjct: 453 LHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 512

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S  ++     +A++L   +    + ++  TF+ +L ACA++  LE+G  +H   ++A  +
Sbjct: 513 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 572

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            D+ V SA++DMY KCG I+ A R F  +   ++  WN+M+ GYA+HG   +   LF +M
Sbjct: 573 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 632

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              G  PD +T++ VL++C H G V E   +   MS+++ L P++EH++C+VDLLGR G 
Sbjct: 633 MLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGK 692

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLS 688
           L+     I+ MP+ P+  IW+++L AC      N +LG  A   LLEL+P N   YVLL+
Sbjct: 693 LDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 752

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YAS   W DV K R  MKE  + KE G SW+ +    H F AGD  H +   IY +L 
Sbjct: 753 NMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLR 812

Query: 749 KLYEHM 754
           +L   M
Sbjct: 813 ELNRKM 818



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 155/638 (24%), Positives = 280/638 (43%), Gaps = 93/638 (14%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G   +  LS TLI+ + +  D   A +   +  NR+++T+  LISG  +  +   A 
Sbjct: 126 IKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEAC 185

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--------VHGVCLKLGFSSRVYLVSG 118
             F  +   G  P+ + F S ++AC   QE+          +HG+  K  + S V + + 
Sbjct: 186 ARFRDMVRAGFIPNHYAFGSALRAC---QESGPSGCKLGVQIHGLISKTRYGSDVVVCNV 242

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I  Y    +  +      D + + N +++ +++  Y   G+   + ++F  M+  GL  
Sbjct: 243 LISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGF 302

Query: 178 -----NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
                + FS  +VL      ++G ++H   ++ G L+     + N ++N+Y + G   DA
Sbjct: 303 SFKPNDAFSEFSVLEEG--RRKGREVHAHVIRTG-LNDNKVAIGNGLVNMYAKSGAIADA 359

Query: 233 VKMFDEITEPDVVSWSERIAA------ACDGVEAFGL----------------------- 263
             +F+ + E D VSW+  I+       + D  E F L                       
Sbjct: 360 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASV 419

Query: 264 ------FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
                 F  +    + ++  T IN+LS+V    +     QI A   K    +  +IGNAL
Sbjct: 420 SQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNAL 479

Query: 318 ISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           +S YGKCG++N+   IF  +   +D VSWNSMI+GY  N   ++A+D+   M++     +
Sbjct: 480 LSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD 539

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            +T A+IL A ++  +L++ M+VH+  I++    D  + S L+  Y KC  ++ + R   
Sbjct: 540 SFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFE 599

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  +N    N++ S         +AL+L+  +    +  +  TF  VL AC+ +  +E+
Sbjct: 600 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEE 659

Query: 497 GKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           G   H  ++   Y     VE  S ++D+  + G ++                        
Sbjct: 660 GFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD------------------------ 694

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
                  EV +  N M    +KP+ + +  VL +CC A
Sbjct: 695 -------EVGDFINSMP---MKPNVLIWRTVLGACCRA 722



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 252/559 (45%), Gaps = 76/559 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+ L+ K  +  D ++   LIS +    D     R +FD    R+ I++N++IS  +R 
Sbjct: 223 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRR 282

Query: 60  CQSGPALKLFDRLRYQGL----RP-DAFTFSSLVKACGSLQENEIVHGVCLKLGFS-SRV 113
             +  A  LF  ++ +GL    +P DAF+  S+++     ++   VH   ++ G + ++V
Sbjct: 283 GDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEE--GRRKGREVHAHVIRTGLNDNKV 340

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + +G +  YAKSG I  A   F   ++ D+V++ +++ G   N    +  E   EM SL
Sbjct: 341 AIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN----ECSEDAAEMFSL 396

Query: 174 GLELNEFSLTAVLGASFD--------VKEGEQIH--GFGVK----VGFLSGVCN------ 213
             E ++ S  +V+GA  D        VK   Q+   G+G+     +  LS V +      
Sbjct: 397 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456

Query: 214 -----------------HLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIAAAC 255
                             + NA+++ Y +CG+  +  K+F  ++E  D VSW+  I+   
Sbjct: 457 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 516

Query: 256 DGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 +A  L   +     +++ +T   +LS+      L  G ++ A   +      V 
Sbjct: 517 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 576

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +G+AL+ MY KCG+++ A   F+ +  ++  SWNSMI+GY+ +G   +AL +F  M+   
Sbjct: 577 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 636

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNE 430
             P+  T   +L A S+   +++  + H   +   + L   +   SC++   G+   L+E
Sbjct: 637 QPPDHVTFVGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 695

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
               ++ +  K  V I                   +RT+ G+C   NG    +  +A   
Sbjct: 696 VGDFINSMPMKPNVLI-------------------WRTVLGACCRANGRNTELGRRAAEM 736

Query: 491 MTDLEQGKAIHCLALKARY 509
           + +LE   A++ + L   Y
Sbjct: 737 LLELEPQNAVNYVLLANMY 755



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 14/293 (4%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           +L  +  T  S++     S   ++A ++H   IK GF+ +  + + LI  Y +   L  +
Sbjct: 94  TLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSA 153

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--A 489
           +++  E+  +N V    L S         EA   +R +  +    N   F   L+AC  +
Sbjct: 154 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 213

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWN 548
             +  + G  IH L  K RY  D+ V + +I MY  C  +  DA+  F  I   +   WN
Sbjct: 214 GPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWN 273

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSK----FGVKP-DEITYLAVLTSCCHAGLVREARTYLS 603
           +++  Y++ G      +LF+ M K    F  KP D  +  +VL      G    A    +
Sbjct: 274 SIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRT 333

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            ++D    I        +V++  + G +  A  ++ ++ +  D+  W SL+S 
Sbjct: 334 GLNDNKVAIGN-----GLVNMYAKSGAIADA-CSVFELMVEKDSVSWNSLISG 380


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 205/686 (29%), Positives = 367/686 (53%), Gaps = 11/686 (1%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-- 91
           A +F  +   RD++++  ++S   +  +   AL +FD +   G  P+AFTFSS++++C  
Sbjct: 73  ARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFA 132

Query: 92  -GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
            G     + +H   +K GF S   L S  I+ Y++      A   F      D V++T +
Sbjct: 133 LGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTV 192

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS--FDVKEGEQIHGFGVKVGFL 208
           +   V  G+   +  +++EM    +  NEF+   +L AS    ++ G+ IH   + +G  
Sbjct: 193 IASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVK 252

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFK 265
             +   L  A++N+Y RC +  DA+K+     E DV+ W+  I+     +   EA   F 
Sbjct: 253 LNLV--LKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFH 310

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +  +    + +T +++LS       L  G+QI +   + G  + V +GNAL+ MY KC 
Sbjct: 311 KMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCS 370

Query: 326 -QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             V     +F  +   + +SW S+IAG++E+GF   +L++F  M    + PN +T++ +L
Sbjct: 371 CIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVL 430

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
              S  KS  Q +++H HIIK+    D  + + L+  Y     ++++ RV+ ++++++++
Sbjct: 431 RVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSI 490

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              +LA+ L     H  AL +   ++ +  +++G + +    A A++  +E GK +HC +
Sbjct: 491 TYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYS 550

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           LK+     + V + +ID+Y K G + +A+RAF +I    +  WN ++ G A +G      
Sbjct: 551 LKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSAL 610

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           + F+ M   G++PD IT+L VL++C H GLV     Y   M ++H + PQ +HY C+VD+
Sbjct: 611 SAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDI 670

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR G LE A   I+ MP+ PDA I+++LL+AC+I+ N++LG     + LEL P + + +
Sbjct: 671 LGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFH 730

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEK 710
           +LL  LY   G ++   K R+ +K+K
Sbjct: 731 LLLVKLYDDCGRYDLGEKTRRSIKQK 756



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 165/621 (26%), Positives = 294/621 (47%), Gaps = 26/621 (4%)

Query: 85  SSLVKACG--SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           S +V  C   SL+E   +H   +KLG    +YL +  +  Y+K   +  A   F +    
Sbjct: 24  SKVVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCR 83

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIH 199
           D V++T ++  ++ N   +++ ++F  M   G   N F+ +++L + F   D   G++IH
Sbjct: 84  DVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIH 143

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
              +K GF S     L +++++LY R     DA K+F  +   D VSW+  IA+      
Sbjct: 144 ASSIKHGFESN--QILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGK 201

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLL--SSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
              A  ++ ++       NE+T + LL  SS  G   L+ GK I A    +G    + + 
Sbjct: 202 CSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIG---LQYGKLIHAHAIVLGVKLNLVLK 258

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            AL++MY +C ++ DA  +       D + W ++I+G ++N  F +A+  F H +E S +
Sbjct: 259 TALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAF-HKMEISGV 317

Query: 375 -PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK- 432
             + +T  S+L    +  SL    Q+HS +I++G   D  + + L+  Y KC+ + E   
Sbjct: 318 SASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGL 377

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           R+   I   N +   +L +         ++L L+  +     + N  T SIVL+ C+A+ 
Sbjct: 378 RMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIK 437

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMM 551
              Q   +H   +K + D D+ V +A++D Y   G ++DA R  + +  RDS+  + ++ 
Sbjct: 438 SPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSIT-YTSLA 496

Query: 552 MGYAQHGCYHEVS-NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
               Q G YHE++ ++ + M    VK D  +     ++    G +   +  L C S   G
Sbjct: 497 TRLNQMG-YHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQ-LHCYSLKSG 554

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA- 669
           L   L     ++DL G+ GL+  A+    ++   PD   W  L+S     G+I   L A 
Sbjct: 555 LSCCLSVANGLIDLYGKYGLVHEARRAFTEIT-EPDVVSWNGLISGLASNGHISSALSAF 613

Query: 670 -GSKLLELQPDNESTYVLLSN 689
              +L  +QPD+ +  ++LS 
Sbjct: 614 DDMRLRGIQPDSITFLLVLST 634



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 3/189 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IK     D ++   L+  +        A+R + D   RD ITY +L + L +  
Sbjct: 444 KLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMG 503

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL +   +    ++ D F+ +    A  SL   E    +H   LK G S  + + +
Sbjct: 504 YHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVAN 563

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y K G +  A   F +  + D V++  ++ G   NG    +   F +MR  G++ 
Sbjct: 564 GLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQP 623

Query: 178 NEFSLTAVL 186
           +  +   VL
Sbjct: 624 DSITFLLVL 632



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           LI  + K+     A R   +    D++++N LISGLA       AL  FD +R +G++PD
Sbjct: 565 LIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPD 624

Query: 81  AFTFSSLVKAC 91
           + TF  ++  C
Sbjct: 625 SITFLLVLSTC 635



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 9/216 (4%)

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNA 549
           +  L++G  IH   +K      +++ + ++ +Y KC ++E A++ F ++ CRD +  W  
Sbjct: 32  LKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRD-VVSWTG 90

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG-LVREARTYLSCMSDL 608
           ++  + ++  + E  ++F+ M   G  P+  T+ ++L SC   G      R + S +   
Sbjct: 91  ILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIK-- 148

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           HG        + ++DL  R    E A      M    D   W +++++C   G     L 
Sbjct: 149 HGFESNQILGSSLIDLYSRFDSTEDACKLFSYMD-SGDTVSWTTVIASCVQAGKCSHALR 207

Query: 669 AGSKLLELQ-PDNESTYVLLSNLYASAGMWNDVGKL 703
              ++LE Q   NE T+V L  L AS+ +    GKL
Sbjct: 208 IYMEMLEAQVSSNEFTFVRL--LAASSFIGLQYGKL 241


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 227/759 (29%), Positives = 395/759 (52%), Gaps = 17/759 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q+++ L   G H  P  ST LI  + +   F  + R +FDT    D   +  LI      
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKR-VFDTFPKPDSFMWGVLIKCYVWG 77

Query: 60  CQSGPALKLFDRLRYQG-LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
                A+ L+  + YQ   +   F F S++KAC   G L     VHG  +K GF S   +
Sbjct: 78  GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y +   +  A   F      D VA++++V  +V NG+  +  ++F +M S  +
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197

Query: 176 ELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E +  ++ +V  A  ++   + G  +HG+ V+    S     LNN+++ +Y + G    A
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNAS--LNNSLIVMYGKLGDLYSA 255

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F+ +       W+  I+         EA  +F  ++    + N+ TM+ +L +    
Sbjct: 256 ERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARL 315

Query: 290 RILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             ++ G+ +  F  +     E+  +G AL+ +Y   G + D   +F+ +  K  +SWN++
Sbjct: 316 GRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTL 375

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ ++ NG   +AL +F  M    L+P+ Y++AS L A       +   Q+H +IIK+G 
Sbjct: 376 ISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN 435

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +D + + LI  Y KC  ++ + ++  +I +K+ V  N++           EA+ L+  
Sbjct: 436 F-NDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQ 494

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++ +C +++  TF  V++AC+ +  LE+GK +H   +     +D ++++A+ DMY KCG 
Sbjct: 495 MYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGE 554

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++ A   F ++   S+  W+ M+ GY  HG  +   +LFN+M   G+KP++IT++ +L++
Sbjct: 555 LQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSA 614

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAG V E + Y + MS+  G+ P+ +H+AC+VDLL R G L GA   I  +P P ++ 
Sbjct: 615 CSHAGAVEEGKLYFNSMSEF-GVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSS 673

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW +LL+ C I+  ID+       LL++   +   Y LLSN+YA  G W+  GK+R  MK
Sbjct: 674 IWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMK 733

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            K L K PGYS I +    + F  GD+SHSQ+K+IY+ L
Sbjct: 734 SKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFL 772


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 208/660 (31%), Positives = 365/660 (55%), Gaps = 9/660 (1%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LK G S  ++  +  +  Y   G +  A   F +    + V++  +  G+  + +
Sbjct: 25  LHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQ 84

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKEG-EQIHGFGVKVGFLSGVCNHLN 216
           F +++ + + +   G E+N+F  T +L    S D+ +    +H +  K+G  +     + 
Sbjct: 85  FQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADA--FVG 142

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQ 273
            A+++ Y  CG    A ++FD I   D+VSW+  +A   +     ++  LF  +R   ++
Sbjct: 143 TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYR 202

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N +T+   L S  G    + GK +     KV +   + +G AL+ +Y K G++ +A+  
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF 262

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKS 392
           F+ +   D + W+ MI+ Y+++    +AL++FC M + S++ PN +T AS+L+A ++   
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVL 322

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L    Q+HS ++K G   +  + + L+  Y KC  +  S ++ +   +KN V  N +   
Sbjct: 323 LNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVG 382

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V      +AL L+  + G   +    T+S VL+A A++  LE G+ IH L +K  Y++D
Sbjct: 383 YVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKD 442

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
             V +++IDMY KCG I+DA+  F K+ +     WNA++ GY+ HG   E  NLF+ M +
Sbjct: 443 SVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQ 502

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
              KP+++T++ VL++C +AGL+ + R +   M   +G+ P +EHY C+V LLGR G  +
Sbjct: 503 SNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFD 562

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I ++P  P   +W++LL AC I+ N+DLG +   ++LE++P +++T+VLLSN+YA
Sbjct: 563 EAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYA 622

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           +A  W++V  +RK MK+K + KEPG SW+   G  H+F  GD+SH   K I+  L  LY+
Sbjct: 623 TAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYK 682



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 240/458 (52%), Gaps = 17/458 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-FC 60
           +++ + K GH  D  + T LI  ++   +   A +       +D++++  +++  A  +C
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               +L LF ++R  G RP+ FT S+ +K+C  L+  ++   VHG  LK+ +   +Y+  
Sbjct: 186 HED-SLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +E Y KSGEI  A+  F +    D + ++ M+  Y  + +  ++ E+F  MR   + +
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304

Query: 178 -NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N F+  +VL A      +  G QIH   +KVG  S V   ++NA+M++Y +CG+  ++V
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNV--FVSNALMDVYAKCGEIENSV 362

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+F   TE + V+W+  I       DG +A  LF ++   D Q  E T  ++L +     
Sbjct: 363 KLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLV 422

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+QI +   K  + +   + N+LI MY KCG+++DAR  FD +  +D VSWN++I 
Sbjct: 423 ALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALIC 482

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GYS +G   +AL++F  M + +  PN  T   +L A SN+  L +  + H   +   + +
Sbjct: 483 GYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKG-RAHFKSMLQDYGI 541

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +  +   +C++   G+    +E+ +++ EI  + +V +
Sbjct: 542 EPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMV 579



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 198/426 (46%), Gaps = 8/426 (1%)

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ ++  N+L      R   AGK +     K G    +   N L++ Y   G + DA  +
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +   ++VS+ ++  G+S +  F +A  +   +       N +   ++L+ + +    
Sbjct: 61  FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
              + VH+++ K G   D  + + LI  Y  C  ++ +++V   I  K+ V    + +  
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
               CH ++L L+  +       N  T S  LK+C  +   + GK++H  ALK  YD+D+
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDL 240

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V  A++++Y K G I +A++ F ++ +D L  W+ M+  YAQ     E   LF +M + 
Sbjct: 241 YVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQS 300

Query: 574 G-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             V P+  T+ +VL +C    L+       SC+  + GL   +     ++D+  + G +E
Sbjct: 301 SVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKV-GLDSNVFVSNALMDVYAKCGEIE 359

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNL 690
            + + +       +   W +++      G+ +  L L +    L++QP  E TY   S L
Sbjct: 360 NS-VKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQP-TEVTYS--SVL 415

Query: 691 YASAGM 696
            ASA +
Sbjct: 416 RASASL 421



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 6/259 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++K G   +  +S  L+  + K  +   + +    +  ++ + +N +I G  +  
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  +    ++P   T+SS+++A  SL   +    +H + +K  ++    + +
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN 447

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  A + F      D V++ A++CGY  +G   ++  +F  M+    + 
Sbjct: 448 SLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKP 507

Query: 178 NEFSLTAVLGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           N+ +   VL A  +  + +  + H   +   +    C      ++ L  R GQ  +AVK+
Sbjct: 508 NKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKL 567

Query: 236 FDEIT-EPDVVSWSERIAA 253
             EI  +P V+ W   + A
Sbjct: 568 IGEIPFQPSVMVWRALLGA 586


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 217/736 (29%), Positives = 370/736 (50%), Gaps = 66/736 (8%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           IS   +  D   A   L    +R+ +++N +I+ +AR    G AL+++  +  +GL P  
Sbjct: 83  ISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTN 142

Query: 82  FTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           FT +S++ ACG+   L +    HG+ +K+G     ++ +G +  Y K G +  A   F  
Sbjct: 143 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDW 202

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---------- 188
               + V++TAM+ G   +G  D +  +F  M    + ++  ++++VLGA          
Sbjct: 203 MSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYN 262

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVS 246
            +  ++  + IH   V+ GF S    H+ N+++++Y + G K+D A+K+F+ ++   +VS
Sbjct: 263 VARAIRLAQSIHALVVRKGFDSD--QHVGNSLIDMYAK-GMKMDEAMKVFESMSSVSIVS 319

Query: 247 WSERIAA----AC--DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           W+  +       C    +E   L ++   + F+ NE T  N+L+S               
Sbjct: 320 WNILVTGYGQLGCYERALEVLDLMQE---SGFEPNEVTYSNMLAS--------------- 361

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
            C K                      V  AR++FD +      +WN++++GY +      
Sbjct: 362 -CIKAR-------------------DVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQD 401

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCL 418
            +++F  M   ++ P+  T+A IL   S    L+   QVHS  +K   LL + M   S L
Sbjct: 402 TIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVK--LLLHNDMFVASGL 459

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y KC  +  ++ + + + +++ V  N++ S L   S + EA + ++ +  +      
Sbjct: 460 IDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTE 519

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           S+++ ++ +CA ++ + QG+ IH   LK  YDQ+++V S++IDMY KCG ++DA+  F  
Sbjct: 520 SSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNC 579

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +   ++  WN M+ GYAQ+G   +   LF  M     KPD +T++AVLT C H+GLV EA
Sbjct: 580 MIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEA 639

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             Y + M   +G+ P +EHY C++D LGR G        ID+MP   DA +W+ LL+AC 
Sbjct: 640 IAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACV 699

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ N +LG  A   L  L P N S YVLLSN+YA+ G   D   +R  M  + + K  GY
Sbjct: 700 VHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGY 759

Query: 719 SWIHVGGYTHHFYAGD 734
           SW++       F   D
Sbjct: 760 SWVNHKDGARAFMVAD 775



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/501 (24%), Positives = 230/501 (45%), Gaps = 51/501 (10%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VY  +  I    ++G++ +A        D + V++  ++     +    ++ E++  M  
Sbjct: 76  VYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQ 135

Query: 173 LGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            GL    F+L +VL   GA   + +G + HG  VKVG L G    + N ++ +Y +CG  
Sbjct: 136 EGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVG-LDG-NQFVENGLLGMYTKCGSV 193

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DAV++FD ++ P+ VS++  +   A  G   +A  LF  +  +  +++   + ++L + 
Sbjct: 194 ADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGAC 253

Query: 287 GGE--------RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
                      R +R  + I A   + GF     +GN+LI MY K  ++++A  +F+ + 
Sbjct: 254 AQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS 313

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
               VSWN ++ GY + G + +AL++   M E    PN  T +++L              
Sbjct: 314 SVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLA------------- 360

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
                            SC+     K   +  ++ +  +I K +    N L S       
Sbjct: 361 -----------------SCI-----KARDVPSARAMFDKISKPSVTTWNTLLSGYGQEEL 398

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
           H + +EL+R +     + + +T +++L  C+ +  LE GK +H  ++K     D+FV S 
Sbjct: 399 HQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASG 458

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +IDMY KCG +  A+  F  +    +  WN+M+ G A H    E  + F +M + G+ P 
Sbjct: 459 LIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPT 518

Query: 579 EITYLAVLTSCCHAGLVREAR 599
           E +Y +++ SC     + + R
Sbjct: 519 ESSYASMINSCARLSSIPQGR 539



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 229/504 (45%), Gaps = 54/504 (10%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L +K G   +  +   L+  +TK      A R      + + +++ A++ GLA+    
Sbjct: 165 HGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAV 224

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG-----------SLQENEIVHGVCLKLGFSS 111
             AL+LF R+    +R D    SS++ AC            +++  + +H + ++ GF S
Sbjct: 225 DDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDS 284

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++ +  I+ YAK  ++  A   F     +  V++  +V GY   G ++++ EV   M+
Sbjct: 285 DQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQ 344

Query: 172 SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G E NE + + +L +    ++                                     
Sbjct: 345 ESGFEPNEVTYSNMLASCIKARDVPS---------------------------------- 370

Query: 232 AVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           A  MFD+I++P V +W+  ++         D +E   LF+ ++  + Q +  T+  +LS+
Sbjct: 371 ARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIE---LFRRMQHQNVQPDRTTLAVILST 427

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                IL  GKQ+ +   K+     + + + LI MY KCGQV  A+ IF+ +  +D V W
Sbjct: 428 CSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCW 487

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NSMI+G + +    +A D F  M E  + P   + AS++ + +   S+ Q  Q+H+ ++K
Sbjct: 488 NSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLK 547

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G+  +  + S LI  Y KC  +++++   + +  KN V  N +           +A+EL
Sbjct: 548 DGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVEL 607

Query: 466 YRTIWGSCREVNGSTFSIVLKACA 489
           +  +  + ++ +  TF  VL  C+
Sbjct: 608 FEYMLTTKQKPDSVTFIAVLTGCS 631



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 179/367 (48%), Gaps = 25/367 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           ++  L+ ++G   + +  + +++   K  D   A R +FD  ++  + T+N L+SG  + 
Sbjct: 338 EVLDLMQESGFEPNEVTYSNMLASCIKARDVPSA-RAMFDKISKPSVTTWNTLLSGYGQE 396

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                 ++LF R+++Q ++PD  T + ++  C   G L+  + VH   +KL   + +++ 
Sbjct: 397 ELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVA 456

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           SG I+ Y+K G++  A++ F    + D V + +M+ G   +   +++ + F +MR  G+ 
Sbjct: 457 SGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMF 516

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             E S  +++ +      + +G QIH   +K G+   V  ++ ++++++Y +CG   DA 
Sbjct: 517 PTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNV--YVGSSLIDMYAKCGNMDDAR 574

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             F+ +   ++V+W+E I        G +A  LF+ +     + +  T I +L+      
Sbjct: 575 LFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCS--- 631

Query: 291 ILRAGKQIQAFCY------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSV 343
              +G   +A  Y        G   +V     LI   G+ G+  +  ++ D + +K D++
Sbjct: 632 --HSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAI 689

Query: 344 SWNSMIA 350
            W  ++A
Sbjct: 690 LWEVLLA 696


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 307/572 (53%), Gaps = 8/572 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G+Q+H   +  G+    C  L N ++N+Y +CG+   A+K+FD + + ++VSW+  I
Sbjct: 21  LRRGKQLHALLICAGYTP--CTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78

Query: 252 AAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         EA   F  +R       ++   + + +      +  GKQ+     K G  
Sbjct: 79  SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG 138

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + +G+ L  MY KCG + DA  +F+ +  KD VSW +MI GYS+ G F +AL  F  M
Sbjct: 139 SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           ++  +  + + + S L A    K+ K    VHS ++K GF  D  + + L   Y K   +
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDM 258

Query: 429 NESKRVLSEIDK--KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
             +  V   ID   +N V    L    V      + L ++  +     E N  TFS ++K
Sbjct: 259 ESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACA    LEQG  +H   +K  +D+D FV S ++DMY KCG +E A +AF +I   +   
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA 377

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN+++  + QHG   +   +F +M   GVKP+ IT++++LT C HAGLV E   Y   M 
Sbjct: 378 WNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 437

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             +G++P  EHY+C++DLLGR G L+ AK  I++MP  P+A  W S L AC I+G+ ++G
Sbjct: 438 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMG 497

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
            LA  KL++L+P N    VLLSN+YA+   W DV  +R  M++  + K PGYSW+ VG  
Sbjct: 498 KLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYK 557

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           TH F A D SH +   IY++L  L + + A  
Sbjct: 558 THVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 589



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 234/450 (52%), Gaps = 15/450 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q+++LLI  G+     L+  L++ ++K  +   A + LFDT   R+++++ A+ISGL++ 
Sbjct: 26  QLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK-LFDTMPQRNLVSWTAMISGLSQN 84

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            +   A++ F  +R  G  P  F FSS ++AC   GS++  + +H + LK G  S +++ 
Sbjct: 85  SKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVG 144

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S   + Y+K G +  A   F +    D V++TAM+ GY   GEF+++   F +M    + 
Sbjct: 145 SNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVT 204

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +++  L + LGA   +K    G  +H   VK+GF S +   + NA+ ++Y + G    A 
Sbjct: 205 IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI--FVGNALTDMYSKAGDMESAS 262

Query: 234 KMFDEITE-PDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            +F   +E  +VVS++  I    +  +      +F +LR    + NE+T  +L+ +   +
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G Q+ A   K+ F E   + + L+ MYGKCG +  A   FD +     ++WNS++
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLV 382

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
           + + ++G    A+ +F  M++  + PN  T  S+L   S++  +++ +     + K+ G 
Sbjct: 383 SVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +  +   SC+I   G+   L E+K  ++ +
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 230/481 (47%), Gaps = 25/481 (5%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L+  + +H + +  G++   +L +  +  Y+K GE+  A   F      + V++TAM+ G
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSG 210
              N +F ++   F  MR  G    +F+ ++ + A      ++ G+Q+H   +K G  S 
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL 267
           +   + + + ++Y +CG   DA K+F+E+   D VSW+  I   +   +  EA   FK +
Sbjct: 141 L--FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
              +  I+++ + + L + G  +  + G+ + +   K+GF   + +GNAL  MY K G +
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDM 258

Query: 328 NDARSIFDY-LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
             A ++F      ++ VS+  +I GY E     + L +F  +    + PN +T +S+++A
Sbjct: 259 ESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA 318

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +N  +L+Q  Q+H+ ++K  F  D  + S L+  YGKC  L ++ +   EI     +  
Sbjct: 319 CANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAW 378

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG--------K 498
           N+L SV        +A++++  +     + N  TF  +L  C+    +E+G        K
Sbjct: 379 NSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK 438

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQH 557
               +  +  Y       S VID+  + G +++AK    ++  +  A GW + +     H
Sbjct: 439 TYGVVPGEEHY-------SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491

Query: 558 G 558
           G
Sbjct: 492 G 492



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 197/396 (49%), Gaps = 20/396 (5%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + +++ +    + LR GKQ+ A     G+     + N L++MY KCG+++ A  +FD + 
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            ++ VSW +MI+G S+N  F++A+  FC M     +P  +  +S + A ++  S++   Q
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H   +K G   +  + S L   Y KC A+ ++ +V  E+  K+ V   A+         
Sbjct: 128 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 187

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             EAL  ++ +      ++       L AC A+   + G+++H   +K  ++ DIFV +A
Sbjct: 188 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247

Query: 519 VIDMYCKCGTIEDAKRAF--RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           + DMY K G +E A   F     CR+ +  +  ++ GY +     +  ++F ++ + G++
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRN-VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 306

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLGRVGL 630
           P+E T+ +++ +C +   + +        + LH  + ++         + +VD+ G+ GL
Sbjct: 307 PNEFTFSSLIKACANQAALEQG-------TQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           LE A    D++  P +   W SL+S   ++G   LG
Sbjct: 360 LEQAIQAFDEIGDPTEI-AWNSLVS---VFGQHGLG 391


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 226/739 (30%), Positives = 378/739 (51%), Gaps = 21/739 (2%)

Query: 14   DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLF-DR 71
            D +L T +I+ +        + RF+FD  +++++  +NA+IS  +R       L+ F + 
Sbjct: 474  DDVLCTRIITMYAMCGSPDDS-RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 532

Query: 72   LRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
            +    L PD FT+  ++KAC  + +  I   VHG+ +K G    V++ +  +  Y   G 
Sbjct: 533  ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 592

Query: 129  IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS----KEVFVEMRSLGLELNEFSLTA 184
            +  A   F    + + V++ +M+  +  NG  ++S     E+  E        +  +L  
Sbjct: 593  VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652

Query: 185  VLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
            VL      +E   G+ +HG+ VK+     +   LNNA+M++Y +CG   +A  +F     
Sbjct: 653  VLPVCAREREIGLGKGVHGWAVKLRLDKELV--LNNALMDMYSKCGCITNAQMIFKMNNN 710

Query: 242  PDVVSWSERIAAACDGVEAFGLFKDLRF-----NDFQINEYTMINLLSSVGGERILRAGK 296
             +VVSW+  +       +  G F  LR       D + +E T++N +     E  L + K
Sbjct: 711  KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 770

Query: 297  QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            ++  +  K  F+    + NA ++ Y KCG ++ A+ +F  +  K   SWN++I G++++ 
Sbjct: 771  ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 830

Query: 357  FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
                +LD    M    L+P+ +T+ S+L A S  KSL+   +VH  II++    D  +  
Sbjct: 831  DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 890

Query: 417  CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
             +++ Y  C  L   + +   ++ K+ V  N + +  +       AL ++R +     ++
Sbjct: 891  SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 950

Query: 477  NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
             G +   V  AC+ +  L  G+  H  ALK   + D F+  ++IDMY K G+I  + + F
Sbjct: 951  CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 1010

Query: 537  RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
              +   S A WNAM+MGY  HG   E   LF +M + G  PD++T+L VLT+C H+GL+ 
Sbjct: 1011 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 1070

Query: 597  EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA-KMTIDQMPIPPDAHIWQSLLS 655
            E   YL  M    GL P L+HYAC++D+LGR G L+ A ++  ++M    D  IW+SLLS
Sbjct: 1071 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 1130

Query: 656  ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
            +C I+ N+++G    +KL EL+P+    YVLLSNLYA  G W DV K+R+ M E  L K+
Sbjct: 1131 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 1190

Query: 716  PGYSWIHVGGYTHHFYAGD 734
             G SWI +      F  G+
Sbjct: 1191 AGCSWIELNRKVFSFVVGE 1209



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 292/638 (45%), Gaps = 48/638 (7%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++ L++K G   D  +   L+S +        A +       R+++++N++I   +    
Sbjct: 564  VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 623

Query: 62   SGPALKLFDRLRYQ----GLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSR 112
            S  +  L   +  +       PD  T  +++  C   +E EI     VHG  +KL     
Sbjct: 624  SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA--REREIGLGKGVHGWAVKLRLDKE 681

Query: 113  VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            + L +  ++ Y+K G I +A+M F+   + + V++  MV G+   G+   + +V  +M +
Sbjct: 682  LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 741

Query: 173  LGLELNEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLSGVCNHL-NNAIMNLYVRC 226
             G ++    +T +        E      +++H + +K  F   V N L  NA +  Y +C
Sbjct: 742  GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF---VYNELVANAFVASYAKC 798

Query: 227  GQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
            G    A ++F  I    V SW+  I   A + D   +      ++ +    + +T+ +LL
Sbjct: 799  GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 858

Query: 284  SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            S+    + LR GK++  F  +      + +  +++S+Y  CG++   +++FD +  K  V
Sbjct: 859  SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 918

Query: 344  SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
            SWN++I GY +NGF ++AL +F  M+ + +   G +M  +  A S   SL+   + H++ 
Sbjct: 919  SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 978

Query: 404  IKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            +K   L DD+ I+C LI  Y K  ++ +S +V + + +K+    NA+           EA
Sbjct: 979  LKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 1037

Query: 463  LELYRTIWGSCREVNGSTFSIVLKAC-------AAMTDLEQGKAIHCLALKARYDQDIFV 515
            ++L+  +  +    +  TF  VL AC         +  L+Q K+   L    ++      
Sbjct: 1038 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH------ 1091

Query: 516  ESAVIDMYCKCGTIEDAKRAF-RKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKF 573
             + VIDM  + G ++ A R    ++  ++  G W +++     H        +  K+  F
Sbjct: 1092 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL--F 1149

Query: 574  GVKPDEITYLAVLTSCCHAGL-----VREARTYLSCMS 606
             ++P++     VL S  +AGL     VR+ R  ++ MS
Sbjct: 1150 ELEPEKPENY-VLLSNLYAGLGKWEDVRKVRQRMNEMS 1186



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             ++L+A     D+E G+ IH L +   R   D  + + +I MY  CG+ +D++  F  +
Sbjct: 442 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSC 589
              +L  WNA++  Y+++  Y EV   F +M S   + PD  TY  V+ +C
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 552


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 209/651 (32%), Positives = 339/651 (52%), Gaps = 37/651 (5%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LK G    ++  +  +  Y KS  +  A   F +  + + +++  ++ GY  +  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLN 216
           F ++ E+FV +   G ELN F  T +L    S D  E G  IH    K+G  S     + 
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNA--FVG 177

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
            A+++ Y  CG+   A ++FD I   D+VSW+  +    +     EA  LF  +R   F+
Sbjct: 178 TALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N +T  ++  +  G      GK +     K  +   + +G AL+ +Y K G ++DAR  
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXA 297

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ +  KD + W+ MIA Y+++    +A++MF  M +  ++PN +T AS+L+A +  + L
Sbjct: 298 FEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV-HINALASV 452
               Q+H H+IK G   D  + + L+  Y KC  +  S  + +E   +N V   N +   
Sbjct: 358 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVG 417

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V      +AL L+  +     +    T+S  L+ACA++  LE G  IH L +K  +D+D
Sbjct: 418 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD 477

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           I V +A+IDMY KCG+I+DA+  F  + +     WNAM+ GY+ HG              
Sbjct: 478 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG-------------- 523

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
                          +C +AGL+ + + Y + M   HG+ P +EHY C+V LLGR G L+
Sbjct: 524 --------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 569

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   ID++P  P   +W++LL AC I+ +I+LG ++   +LE++P +++T+VLLSN+YA
Sbjct: 570 KAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYA 629

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           +A  W++V  +RK MK K + KEPG SWI   G  H F  GD+SH + + I
Sbjct: 630 TAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVI 680



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 236/459 (51%), Gaps = 18/459 (3%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGP 64
           ++K G  LD      L++ + K +DF      LFD    R+ I++  LI G A   +   
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVK-SDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIE 121
           A++LF RL  +G   + F F++++K   S+   E+   +H    KLG  S  ++ +  I+
Sbjct: 123 AIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALID 182

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y+  G +  A   F   L  D V++T MV  +  N  F ++ ++F +MR +G + N F+
Sbjct: 183 AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242

Query: 182 LTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
             +V  A     +FDV  G+ +HG  +K  +   +  ++  A+++LY + G   DA   F
Sbjct: 243 FASVFKACLGLEAFDV--GKSVHGCALKSRYELDL--YVGVALLDLYTKSGDIDDARXAF 298

Query: 237 DEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           +EI + DV+ WS    R A +    EA  +F  +R      N++T  ++L +      L 
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLN 358

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGY 352
            G QI     K+G    V + NAL+ +Y KCG++ ++  +F     ++ V+ WN++I G+
Sbjct: 359 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGH 418

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G   +AL +F +MLE+ +     T +S L A ++  +L+  +Q+HS  +K+ F  D 
Sbjct: 419 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDI 478

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            + + LI  Y KC ++ +++ V   ++K++ V  NA+ S
Sbjct: 479 VVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMIS 517



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 192/367 (52%), Gaps = 14/367 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I++ + K GH  +  + T LI  ++       A R +FD    +D++++  +++  A   
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVA-REVFDGILYKDMVSWTGMVTCFAEND 219

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ALKLF ++R  G +P+ FTF+S+ KAC  L+  ++   VHG  LK  +   +Y+  
Sbjct: 220 CFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGV 279

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y KSG+I  A   F +    D + ++ M+  Y  + +  ++ E+F +MR   +  
Sbjct: 280 ALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLP 339

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+F+  +VL A   ++    G QIH   +K+G  S V   ++NA+M++Y +CG+  +++ 
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV--FVSNALMDVYAKCGRMENSMX 397

Query: 235 MFDEIT-EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F E     DV  W+  I       DG +A  LF ++     Q  E T  + L +     
Sbjct: 398 LFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLA 457

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G QI +   K  F + + + NALI MY KCG + DAR +FD +  +D VSWN+MI+
Sbjct: 458 ALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMIS 517

Query: 351 GYSENGF 357
           GYS +G 
Sbjct: 518 GYSMHGL 524



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 5/269 (1%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N +  A+ L+         +   +H  I+K G  LD    + L+  Y K + L ++ ++ 
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            E+ ++N +    L      +    EA+EL+  +     E+N   F+ +LK   +M   E
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGE 156

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            G  IH    K  ++ + FV +A+ID Y  CG ++ A+  F  I    +  W  M+  +A
Sbjct: 157 LGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFA 216

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           ++ C+ E   LF++M   G KP+  T+ +V  +C         ++   C         +L
Sbjct: 217 ENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR---YEL 273

Query: 616 EHY--ACIVDLLGRVGLLEGAKMTIDQMP 642
           + Y    ++DL  + G ++ A+   +++P
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARXAFEEIP 302



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           QI+  +IK G H D  +S  L+  + K      +     ++ +R D+  +N +I G  + 
Sbjct: 362 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQL 421

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                AL+LF  +    ++    T+SS ++AC SL   E    +H + +K  F   + + 
Sbjct: 422 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT 481

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           +  I+ YAK G I  A + F      D V++ AM+ GY  +G
Sbjct: 482 NALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 523


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 180/488 (36%), Positives = 296/488 (60%), Gaps = 9/488 (1%)

Query: 274 INEYTMIN-LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           ++E  ++N +L+     R+L  GKQ+     K+GF  +  +GN++I MY KCG V +A  
Sbjct: 1   MSESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAAR 60

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F+ L  ++ +SWN+MIAGY+      +AL++F  M E   +P+GYT +S L+A S + +
Sbjct: 61  VFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADA 120

Query: 393 LKQAMQVHSHIIKSGF--LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             + MQ+H+ +I+ GF  L   ++   L+  Y KC  + E+++V   I++K+ +  + L 
Sbjct: 121 AGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTL- 179

Query: 451 SVLVYASCH--AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            +L YA      EA++L+R +  S   ++G   S ++   A    LEQGK +H   +K  
Sbjct: 180 -ILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVP 238

Query: 509 YDQ-DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           Y   ++ V ++V+DMY KCG   +A   FR++   ++  W  M+ GY +HG  ++   LF
Sbjct: 239 YGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELF 298

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           N+M + G++PD +TYLAVL++C H+GL++E + Y S +     + P++EHYAC+VDLLGR
Sbjct: 299 NEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGR 358

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L+ AK  I++MP+ P+  IWQ+LLS C ++G++++G   G  LL  + +N + YV++
Sbjct: 359 GGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMV 418

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+YA AG W +  K+R+ +K K L KE G SW+ +    H FY GD  H   +EI+ E+
Sbjct: 419 SNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIH-EV 477

Query: 748 IKLYEHMV 755
           +K  E  V
Sbjct: 478 LKEMEKRV 485



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 193/363 (53%), Gaps = 12/363 (3%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L + + VHGV  KLGF     + +  I+ Y+K G +  A   F      + +++ AM+ G
Sbjct: 20  LDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAG 79

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG 210
           Y      +++  +F EMR  G   + ++ ++ L A   +    EG QIH   ++ GF   
Sbjct: 80  YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYL 139

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL 267
             + +  A+++LYV+C +  +A K+FD I E  V+SWS  I   A   +  EA  LF++L
Sbjct: 140 AQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFREL 199

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV--GFMEVVSIGNALISMYGKCG 325
           R +  +++ + + +++       +L  GKQ+ A+  KV  G +E +S+ N+++ MY KCG
Sbjct: 200 RESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLE-MSVANSVLDMYMKCG 258

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
              +A ++F  ++ ++ VSW  MI GY ++G  N+A+++F  M E  + P+  T  ++L 
Sbjct: 259 LTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLS 318

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNA 443
           A S+S  +K+  +  S I+ S   +   +   +C++   G+   L E+K ++ ++  K  
Sbjct: 319 ACSHSGLIKEGKKYFS-ILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPN 377

Query: 444 VHI 446
           V I
Sbjct: 378 VGI 380



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 184/364 (50%), Gaps = 16/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ ++ K G  +  ++  ++I  ++K      A R       R++I++NA+I+G     
Sbjct: 25  QVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNER 84

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFS--SRVYL 115
               AL LF  +R +G  PD +T+SS +KAC    +  E   +H   ++ GF   ++  +
Sbjct: 85  NGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAV 144

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
               ++ Y K   +  A   F    +   ++++ ++ GY       ++ ++F E+R    
Sbjct: 145 AGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRH 204

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLD 231
            ++ F L++++G   D   +++G+Q+H + +KV +  G+    + N+++++Y++CG  ++
Sbjct: 205 RMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPY--GLLEMSVANSVLDMYMKCGLTVE 262

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F E+ E +VVSW+  I        G +A  LF +++ N  + +  T + +LS+   
Sbjct: 263 ADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSH 322

Query: 289 ERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WN 346
             +++ GK+     C        V     ++ + G+ G++ +A+++ + +  K +V  W 
Sbjct: 323 SGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQ 382

Query: 347 SMIA 350
           ++++
Sbjct: 383 TLLS 386


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 204/579 (35%), Positives = 299/579 (51%), Gaps = 41/579 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           N+I++  +R G   ++  +F  + E D  SW+  IA         EA   F  +  +DF 
Sbjct: 94  NSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFV 153

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +N+Y+  + LS+    + L+ G QI     K  +   V +G+ LI  Y KCG V  AR +
Sbjct: 154 LNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRV 213

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  K+ VSWN +I  Y +NG   +AL+ F  M E    P+  T+AS++ A +   + 
Sbjct: 214 FDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAF 273

Query: 394 KQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVH------- 445
           K+ +Q+H+ ++KS    +D ++ + L+  Y KC  +NE++ V   +  +NAV        
Sbjct: 274 KEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSG 333

Query: 446 ------------------------INALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
                                    NAL +       + EAL L+R +          TF
Sbjct: 334 YAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTF 393

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARY------DQDIFVESAVIDMYCKCGTIEDAKRA 535
             +L A A + DLE G+  H   +K  +      + DIFV +++IDMY KCG++E+  R 
Sbjct: 394 GNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRV 453

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  +       WN M++GYAQ+G   E   LF KM + G KPD +T +  L +C HAGLV
Sbjct: 454 FENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLV 513

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            E R Y   M+  HGL+P  +HY C+VDLLGR G LE AK  I+ MP  PDA +W SLLS
Sbjct: 514 EEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLS 573

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++ NI LG     K+ E+ P +   YVLL+N+Y+  G W D   +RK M+ + + K+
Sbjct: 574 ACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQ 633

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           PG SWI +    H F   D  H Q KEIY  L  L +HM
Sbjct: 634 PGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHM 672



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 225/457 (49%), Gaps = 51/457 (11%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---V 100
           +D  ++N++I+G A+  +   AL  F R+       + ++F S + AC  L++ ++   +
Sbjct: 119 KDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQI 178

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           HG+  K  +S  V++ SG I+ Y+K G +  A   F    + + V++  ++  Y  NG  
Sbjct: 179 HGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPA 238

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVG-FLSGVCNHLN 216
            ++ E F  M  LG + +E +L +V+ A   +   KEG QIH   VK   F + +   L 
Sbjct: 239 IEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLI--LG 296

Query: 217 NAIMNLYVRCGQ---------------------------KLDAVK----MFDEITEPDVV 245
           NA++++Y +CG+                           K  +VK    MF  I + D+V
Sbjct: 297 NALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIV 356

Query: 246 SWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+  IA      +  EA GLF+ L+        YT  NLL++      L  G+Q  +  
Sbjct: 357 SWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHV 416

Query: 303 YKVGFM------EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            K GF         + +GN+LI MY KCG V +   +F+ ++ KD VSWN+MI GY++NG
Sbjct: 417 VKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNG 476

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMI 415
           +  +AL++F  MLE    P+  TM   L A S++  +++  +    + K  G L      
Sbjct: 477 YGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHY 536

Query: 416 SCLITTYGKCNALNESKRVLSEIDKK-NAVHINALAS 451
           +C++   G+   L E+K ++  + K+ +AV  ++L S
Sbjct: 537 TCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLS 573



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 256/591 (43%), Gaps = 119/591 (20%)

Query: 80  DAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D+  F+ L+  C  L+ +     VHG  ++  F   V++ +  I+ Y K G +  A   F
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 137 -----RDCLDLDNVAYTAMVCGYV-----------------WNG---------EFDKSKE 165
                R+    +++  T M  G+V                 WN           F+++ +
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 166 VFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            FV M      LN++S  + L A     D+K G QIHG   K  +   V   + + +++ 
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDV--FMGSGLIDF 200

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWS------ERIAAACDGVEAFGLFKDLRFNDFQINE 276
           Y +CG    A ++FD + E +VVSW+      E+   A + +EAFG   +L    F+ +E
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTEL---GFKPDE 257

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFD 335
            T+ +++S+       + G QI A   K   F   + +GNAL+ MY KCG+VN+AR +FD
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317

Query: 336 YLIF-------------------------------KDSVSWNSMIAGYSENGFFNQALDM 364
            +                                 KD VSWN++IAGY++NG   +AL +
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL------DDSMISCL 418
           F  +   S+ P  YT  ++L A +N   L+   Q HSH++K GF        D  + + L
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSL 437

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y KC ++ E  RV   + +K+ V  N +           EALEL++ +  S  + + 
Sbjct: 438 IDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDH 497

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T    L AC+    +E+G+         RY   +  E  ++        ++D       
Sbjct: 498 VTMIGTLCACSHAGLVEEGR---------RYFFSMTKEHGLL-------PVKD-----HY 536

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            C   L G         + GC  E  +L   M K   +PD + + ++L++C
Sbjct: 537 TCMVDLLG---------RAGCLEEAKDLIESMPK---QPDAVVWSSLLSAC 575



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 14/253 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           + +  TT++S + K A  + A       + +DI+++NALI+G  +  ++  AL LF  L+
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382

Query: 74  YQGLRPDAFTFSSLVKACGSLQENE---------IVHGVCLKLGFSSRVYLVSGFIENYA 124
            + + P  +TF +L+ A  +L + E         + HG   + G    +++ +  I+ Y 
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K G +      F + ++ D+V++  M+ GY  NG   ++ E+F +M   G + +  ++  
Sbjct: 443 KCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIG 502

Query: 185 VLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT- 240
            L A      V+EG +      K   L  V +H    +++L  R G   +A  + + +  
Sbjct: 503 TLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHY-TCMVDLLGRAGCLEEAKDLIESMPK 561

Query: 241 EPDVVSWSERIAA 253
           +PD V WS  ++A
Sbjct: 562 QPDAVVWSSLLSA 574



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 160/368 (43%), Gaps = 53/368 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRF-----LFDTQNRDIITYNALISG 55
           + +  + + G   D +   +++S     A F+   +        D    D+I  NAL+  
Sbjct: 243 EAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDM 302

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
            A+  +   A  +FDR+  +                 ++ E  +V G             
Sbjct: 303 YAKCGRVNEARCVFDRMPVR----------------NAVSETTMVSG------------- 333

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
                  YAKS  + +A   F      D V++ A++ GY  NGE +++  +F  ++   +
Sbjct: 334 -------YAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFL--SGVCNHL--NNAIMNLYVRCGQ 228
               ++   +L AS    D++ G Q H   VK GF   SG    +   N+++++Y++CG 
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGS 446

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             + +++F+ + E D VSW+  I        G+EA  LF+ +  +  + +  TMI  L +
Sbjct: 447 VEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCA 506

Query: 286 VGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSV 343
                ++  G++   +   + G + V      ++ + G+ G + +A+ + + +  + D+V
Sbjct: 507 CSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAV 566

Query: 344 SWNSMIAG 351
            W+S+++ 
Sbjct: 567 VWSSLLSA 574



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/243 (18%), Positives = 103/243 (42%), Gaps = 47/243 (19%)

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            + S F+ +L  C  +      +++H   ++  + +++F+++ +ID+Y KCG ++ A++ 
Sbjct: 22  TDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKV 81

Query: 536 FRKICRDSL-------------------------------AGWNAMMMGYAQHGCYHEVS 564
           F ++   ++                                 WN+M+ G+AQH  + E  
Sbjct: 82  FDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEAL 141

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ 618
           + F +M +     ++ ++ + L++C            L   + +HGLI + ++       
Sbjct: 142 DWFVRMHRDDFVLNDYSFGSGLSACSRL-------KDLKLGAQIHGLISKSKYSLDVFMG 194

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL-- 676
           + ++D   + GL+  A+   D M    +   W  L++     G     L A  ++ EL  
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGME-EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGF 253

Query: 677 QPD 679
           +PD
Sbjct: 254 KPD 256


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 184/526 (34%), Positives = 313/526 (59%), Gaps = 7/526 (1%)

Query: 232 AVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FD++ E ++V+W+    R A      +A  LF D+  + +  + +T  ++LS+   
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSW 345
             +L  GKQ+ +   ++G    V +G +L+ MY KC   G V+D+R +F+ +   + +SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 346 NSMIAGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            ++I  Y+++G  + +A+++FC M+   + PN ++ +S+L+A  N        QV+S+ +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G    + + + LI+ Y +   + ++++    + +KN V  NA+           EA  
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  I  +   ++  TF+ +L   A++  + +G+ IH   LK  Y  +  + +A+I MY 
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           +CG IE A + F ++   ++  W +M+ G+A+HG       +F+KM + G KP+EITY+A
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL++C H G++ E + + + M   HG++P++EHYAC+VDLLGR GLL  A   I+ MP+ 
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            DA +W++LL AC ++GN +LG  A   +LE +PD+ + Y+LLSNL+ASAG W DV K+R
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K MKE+ L KE G SWI V    H F+ G++SH Q+ +IY+EL +L
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQL 529



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 237/461 (51%), Gaps = 36/461 (7%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-- 91
           A++       R+++T+  +I+  A+   +  A+ LF  +   G  PD FT+SS++ AC  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 92  -GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---SGEIVSAEMCFRDCLDLDNVAY 147
            G L   + +H   ++LG +  V +    ++ YAK    G +  +   F    + + +++
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 148 TAMVCGYVWNGEFDKSK-EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGV 203
           TA++  Y  +GE DK   E+F +M S  +  N FS ++VL A  ++ +   GEQ++ + V
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEA 260
           K+G  S  C  + N+++++Y R G+  DA K FD + E ++VS++  +   A      EA
Sbjct: 184 KLGIASVNC--VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           F LF ++      I+ +T  +LLS       +  G+QI     K G+     I NALISM
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y +CG +  A  +F+ +  ++ +SW SMI G++++GF  +AL+MF  MLE    PN  T 
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            ++L A S+   + +  +  + + K  G +      +C++   G+   L E+        
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF----- 416

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
                 IN++  +       A+AL ++RT+ G+CR V+G+T
Sbjct: 417 ------INSMPLM-------ADAL-VWRTLLGACR-VHGNT 442



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 193/377 (51%), Gaps = 29/377 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFA------DFRRAFRFLFDTQNRDIITYNALIS 54
           Q++S +I+ G  LD  +  +L+  + K A      D R+ F  +      +++++ A+I+
Sbjct: 72  QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM---PEHNVMSWTAIIT 128

Query: 55  GLARFCQSGP----ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKL 107
             A   QSG     A++LF ++    +RP+ F+FSS++KACG+L +    E V+   +KL
Sbjct: 129 AYA---QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           G +S   + +  I  YA+SG +  A   F    + + V+Y A+V GY  N + +++  +F
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245

Query: 168 VEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            E+   G+ ++ F+  ++L  +  +    +GEQIHG  +K G+ S  C  + NA++++Y 
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC--ICNALISMYS 303

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN 281
           RCG    A ++F+E+ + +V+SW+  I           A  +F  +     + NE T + 
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 282 LLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IF 339
           +LS+     ++  G++     YK  G +  +     ++ + G+ G + +A    + + + 
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423

Query: 340 KDSVSWNSMIAGYSENG 356
            D++ W +++     +G
Sbjct: 424 ADALVWRTLLGACRVHG 440


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 184/526 (34%), Positives = 313/526 (59%), Gaps = 7/526 (1%)

Query: 232 AVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FD++ E ++V+W+    R A      +A  LF D+  + +  + +T  ++LS+   
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSW 345
             +L  GKQ+ +   ++G    V +G +L+ MY KC   G V+D+R +F+ +   + +SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 346 NSMIAGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            ++I  Y+++G  + +A+++FC M+   + PN ++ +S+L+A  N        QV+S+ +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G    + + + LI+ Y +   + ++++    + +KN V  NA+           EA  
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  I  +   ++  TF+ +L   A++  + +G+ IH   LK  Y  +  + +A+I MY 
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           +CG IE A + F ++   ++  W +M+ G+A+HG       +F+KM + G KP+EITY+A
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL++C H G++ E + + + M   HG++P++EHYAC+VDLLGR GLL  A   I+ MP+ 
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            DA +W++LL AC ++GN +LG  A   +LE +PD+ + Y+LLSNL+ASAG W DV K+R
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 488

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K MKE+ L KE G SWI V    H F+ G++SH Q+ +IY+EL +L
Sbjct: 489 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQL 534



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 237/461 (51%), Gaps = 36/461 (7%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-- 91
           A++       R+++T+  +I+  A+   +  A+ LF  +   G  PD FT+SS++ AC  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 92  -GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---SGEIVSAEMCFRDCLDLDNVAY 147
            G L   + +H   ++LG +  V +    ++ YAK    G +  +   F    + + +++
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 148 TAMVCGYVWNGEFDKSK-EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGV 203
           TA++  Y  +GE DK   E+F +M S  +  N FS ++VL A  ++ +   GEQ++ + V
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEA 260
           K+G  S  C  + N+++++Y R G+  DA K FD + E ++VS++  +   A      EA
Sbjct: 189 KLGIASVNC--VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
           F LF ++      I+ +T  +LLS       +  G+QI     K G+     I NALISM
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y +CG +  A  +F+ +  ++ +SW SMI G++++GF  +AL+MF  MLE    PN  T 
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            ++L A S+   + +  +  + + K  G +      +C++   G+   L E+        
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF----- 421

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
                 IN++  +       A+AL ++RT+ G+CR V+G+T
Sbjct: 422 ------INSMPLM-------ADAL-VWRTLLGACR-VHGNT 447



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 193/377 (51%), Gaps = 29/377 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFA------DFRRAFRFLFDTQNRDIITYNALIS 54
           Q++S +I+ G  LD  +  +L+  + K A      D R+ F  +      +++++ A+I+
Sbjct: 77  QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM---PEHNVMSWTAIIT 133

Query: 55  GLARFCQSGP----ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKL 107
             A   QSG     A++LF ++    +RP+ F+FSS++KACG+L +    E V+   +KL
Sbjct: 134 AYA---QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           G +S   + +  I  YA+SG +  A   F    + + V+Y A+V GY  N + +++  +F
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250

Query: 168 VEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            E+   G+ ++ F+  ++L  +  +    +GEQIHG  +K G+ S  C  + NA++++Y 
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC--ICNALISMYS 308

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN 281
           RCG    A ++F+E+ + +V+SW+  I           A  +F  +     + NE T + 
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368

Query: 282 LLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IF 339
           +LS+     ++  G++     YK  G +  +     ++ + G+ G + +A    + + + 
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428

Query: 340 KDSVSWNSMIAGYSENG 356
            D++ W +++     +G
Sbjct: 429 ADALVWRTLLGACRVHG 445


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 224/750 (29%), Positives = 384/750 (51%), Gaps = 29/750 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           ++S +IK G   D  LS  L+  + K     +A R LFD   +RD++++  L+S   R  
Sbjct: 38  VHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQA-RHLFDEMPHRDVVSWTTLLSAHTRNK 96

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL+LFD +   G  P+ FT SS +++C +L E E    +H   +KLG      L +
Sbjct: 97  HHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGT 156

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K    V          D D V++T M+   V   ++ ++ +++V+M   G+  
Sbjct: 157 TLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYP 216

Query: 178 NEFSLTAVLGASFDVKEGE--------QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           NEF+   +LG    +  G+        Q+  FGV++  +      L  AI+ +Y +C + 
Sbjct: 217 NEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM------LKTAIICMYAKCRRM 270

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA+K+  +  + DV  W+  I+         EA     D+  +    N +T  +LL++ 
Sbjct: 271 EDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNAS 330

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN-DARSIFDYLIFKDSVSW 345
                L  G+Q  +    VG    + +GNAL+ MY KC     +    F  +   + +SW
Sbjct: 331 SSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISW 390

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            S+IAG++E+GF  +++ +F  M    + PN +T+++IL A S  KS+ Q  ++H +IIK
Sbjct: 391 TSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIK 450

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           +   +D ++ + L+  Y      +E+  V+  ++ ++ +    LA+ L     H  AL  
Sbjct: 451 TQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMAL-- 508

Query: 466 YRTIWGSCR-EVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
            R I   C  EV    FS+   + A A +  +E GK +HC + K+ +++   V ++++  
Sbjct: 509 -RVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHS 567

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG++ DA R F+ I       WN ++ G A +G   +  + F+ M   GVKPD +T+
Sbjct: 568 YSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTF 627

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           L+++ +C    L+ +   Y   M   + + P+L+HY C+VDLLGR G LE A   I+ MP
Sbjct: 628 LSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMP 687

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             PD+ I+++LL+AC ++GN+ LG     + LEL P + + Y+LL++LY +AG+ +   K
Sbjct: 688 FKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDK 747

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
            RK M+E+ L + P   W+ V    + F A
Sbjct: 748 TRKLMRERGLRRSPRQCWMEVKSKIYLFSA 777



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 248/508 (48%), Gaps = 13/508 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ ++K G  L+ +L TTL+  +TK        + L   ++ D++++  +IS L    
Sbjct: 138 KIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETS 197

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL----QENEIVHGVCLKLGFSSRVYLV 116
           +   AL+L+ ++   G+ P+ FTF  L+     L       +++H   +  G    + L 
Sbjct: 198 KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLK 257

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  YAK   +  A    +     D   +T+++ G+V N +  ++    V+M   G+ 
Sbjct: 258 TAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGIL 317

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ-KLDA 232
            N F+  ++L AS  V   + GEQ H   + VG    +  ++ NA++++Y++C     + 
Sbjct: 318 PNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDI--YVGNALVDMYMKCSHTTTNG 375

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           VK F  I  P+V+SW+  IA   +     E+  LF +++    Q N +T+  +L +    
Sbjct: 376 VKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKM 435

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           + +   K++  +  K      +++GNAL+  Y   G  ++A S+   +  +D +++ ++ 
Sbjct: 436 KSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLA 495

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A  ++ G    AL +  HM    +  + +++AS + A +    ++   Q+H +  KSGF 
Sbjct: 496 ARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFE 555

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
             +S+ + L+ +Y KC ++ ++ RV  +I + + V  N L S L      ++AL  +  +
Sbjct: 556 RCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDM 615

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG 497
             +  + +  TF  ++ AC+  + L QG
Sbjct: 616 RLAGVKPDSVTFLSLIFACSQGSLLNQG 643



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 147/606 (24%), Positives = 261/606 (43%), Gaps = 30/606 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L+E   VH   +K+G    +YL +  +  YAK   +  A   F +    D V++T ++ 
Sbjct: 31  TLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLS 90

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLS 209
            +  N    ++ ++F  M   G   NEF+L++ L +   + E   G +IH   VK+G   
Sbjct: 91  AHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGL-- 148

Query: 210 GVCNH-LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFK 265
              NH L   +++LY +C   ++  K+   + + DVVSW+  I++  +     EA  L+ 
Sbjct: 149 -ELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYV 207

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGK--------QIQAFCYKVGFMEVVSIGNAL 317
            +       NE+T + LL   G    L  GK        Q+  F  ++  M    +  A+
Sbjct: 208 KMIEAGIYPNEFTFVKLL---GMPSFLGLGKGYGKVLHSQLITFGVEMNLM----LKTAI 260

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I MY KC ++ DA  +       D   W S+I+G+ +N    +A++    M    ++PN 
Sbjct: 261 ICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNN 320

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN-ALNESKRVLS 436
           +T AS+L A S+  SL+   Q HS +I  G   D  + + L+  Y KC+       +   
Sbjct: 321 FTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFR 380

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            I   N +   +L +         E+++L+  +  +  + N  T S +L AC+ M  + Q
Sbjct: 381 GIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQ 440

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
            K +H   +K + D D+ V +A++D Y   G  ++A      +    +  +  +     Q
Sbjct: 441 TKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQ 500

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
            G +     +   M    VK DE +  + +++    G++   +  L C S   G      
Sbjct: 501 QGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQ-LHCYSFKSGFERCNS 559

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA--GSKLL 674
               +V    + G +  A      +   PD   W  L+S     G I   L A    +L 
Sbjct: 560 VSNSLVHSYSKCGSMRDAYRVFKDI-TEPDRVSWNGLISGLASNGLISDALSAFDDMRLA 618

Query: 675 ELQPDN 680
            ++PD+
Sbjct: 619 GVKPDS 624



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 153/306 (50%), Gaps = 3/306 (0%)

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S+   + L+ G  + +   KVG    + + N L+ +Y KC  V  AR +FD +  +D VS
Sbjct: 25  SLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVS 84

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W ++++ ++ N    +AL +F  ML     PN +T++S L + S     +   ++H+ ++
Sbjct: 85  WTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVV 144

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G  L+  + + L+  Y KC+   E  ++L+ +   + V    + S LV  S  +EAL+
Sbjct: 145 KLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQ 204

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ--GKAIHCLALKARYDQDIFVESAVIDM 522
           LY  +  +    N  TF + L    +   L +  GK +H   +    + ++ +++A+I M
Sbjct: 205 LYVKMIEAGIYPNEFTF-VKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICM 263

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KC  +EDA +  ++  +  +  W +++ G+ Q+    E  N    M   G+ P+  TY
Sbjct: 264 YAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTY 323

Query: 583 LAVLTS 588
            ++L +
Sbjct: 324 ASLLNA 329



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 1/271 (0%)

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           ++ NS++LK+   VHS IIK G   D  + + L+  Y KC  + +++ +  E+  ++ V 
Sbjct: 25  SLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVS 84

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
              L S       H EAL+L+  + GS +  N  T S  L++C+A+ + E G  IH   +
Sbjct: 85  WTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVV 144

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K   + +  + + ++D+Y KC    +  +    +    +  W  M+    +   + E   
Sbjct: 145 KLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQ 204

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           L+ KM + G+ P+E T++ +L      GL +     L       G+   L     I+ + 
Sbjct: 205 LYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMY 264

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +   +E A     Q P   D  +W S++S 
Sbjct: 265 AKCRRMEDAIKVSQQTP-KYDVCLWTSIISG 294


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 202/545 (37%), Positives = 317/545 (58%), Gaps = 9/545 (1%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           NAI+  Y +  + L A ++FD+I EPD+VS++  I+A  D  E   A GLF  +R     
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T+  ++++   +  L    Q+ +     GF   VS+ NAL++ YGK G ++DA+ +
Sbjct: 138 MDXFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195

Query: 334 FDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           F  +   +D VSWNSMI  Y ++   ++AL +F  M+   L  + +T+AS+L A +  + 
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALAS 451
           L   +Q H  +IK+GF  +  + S LI  Y KC   +++ ++V  EI + + V  N + S
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315

Query: 452 VLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
                    E ALE +R + G     N  +F  V+ AC+ ++   QGK IH LALK+   
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIP 375

Query: 511 QD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
            + I V++A+I MY KCG ++DA+R F ++   +    N+M+ GYAQHG   E  +LF  
Sbjct: 376 SNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQW 435

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M +  + P  IT+++VL++C H G V E   Y + M +   + P+ EHY+C++DLLGR G
Sbjct: 436 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 495

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L  A+  I +MP  P +  W SLL AC  +GNI+L + A +++L+L+P N + YV+LSN
Sbjct: 496 KLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 555

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +YASAG W +V  +RK M+++ + K+PG SWI V    H F A DSSH   KEIY+ L +
Sbjct: 556 MYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEE 615

Query: 750 LYEHM 754
           +   M
Sbjct: 616 MSGKM 620



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 226/418 (54%), Gaps = 23/418 (5%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----G 92
           LFD     D+++YN LIS  A   ++ PAL LF  +R  GL  D FT S+++ AC    G
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVG 155

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMV 151
            + +   +H V +  GF S V + +  +  Y K+G++  A+  F     + D V++ +M+
Sbjct: 156 LIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFL 208
             Y  + E  K+  +F EM   GL ++ F+L +VL A     D+  G Q HG  +K GF 
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 209 SGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAAACDGVE----AFGL 263
               +H+ + +++LY +CG  + D  K+F+EITEPD+V W+  ++      E    A   
Sbjct: 273 QN--SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYG 322
           F+ ++   ++ N+ + + ++S+         GKQI +   K       +S+ NALI+MY 
Sbjct: 331 FRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYS 390

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
           KCG + DAR +FD +   ++VS NSMIAGY+++G   ++L +F  MLE  + P   T  S
Sbjct: 391 KCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           +L A +++  +++    + +++K  F ++      SC+I   G+   L+E++ +++ +
Sbjct: 451 VLSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARM 507



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 244/509 (47%), Gaps = 21/509 (4%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  I  YAK    + A   F    + D V+Y  ++  Y   GE   +  +F  MR 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 173 LGLELNEFSLTAVLGASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +GL+++ F+L+AV+ A   DV    Q+H   V  GF S V   +NNA++  Y + G   D
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS--VNNALLTYYGKNGDLDD 191

Query: 232 AVKMFDEITE-PDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A ++F  +    D VSW+  I A     +G +A GLF+++      ++ +T+ ++L++  
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWN 346
               L  G Q      K GF +   +G+ LI +Y KC G ++D R +F+ +   D V WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311

Query: 347 SMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           +M++GYS+N  F   AL+ F  M      PN  +   ++ A SN  S  Q  Q+HS  +K
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK 371

Query: 406 SGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           S    +  S+ + LI  Y KC  L +++R+   + + N V +N++ +         E+L 
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 431

Query: 465 LYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           L++  W   R++  +  TF  VL ACA    +E+G     + +K +++ +   E  S +I
Sbjct: 432 LFQ--WMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNM-MKEKFNIEPEAEHYSCMI 488

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           D+  + G + +A+    ++  +  + GW +++     HG         N++    ++P  
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV--LQLEPSN 546

Query: 580 ITYLAVLTSC-CHAGLVREARTYLSCMSD 607
                VL++    AG   E  T    M D
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRD 575



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 40/397 (10%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR--------- 331
           +LL +   ER L  GK + +   K          N  I +Y KCG++  AR         
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 332 ----------------------SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
                                  +FD +   D VS+N++I+ Y++ G    AL +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  L  + +T+++++ A  +   L    Q+HS  + SGF    S+ + L+T YGK   L+
Sbjct: 133 EMGLDMDXFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 430 ESKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++KRV   +   ++ V  N++          ++AL L++ +      V+  T + VL A 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGW 547
             + DL  G   H   +K  + Q+  V S +ID+Y KC G + D ++ F +I    L  W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 548 NAMMMGYAQHGCYHEVS-NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY--LSC 604
           N M+ GY+Q+  + E +   F +M   G +P++ +++ V+++C +     + +    L+ 
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
            SD+      +++   ++ +  + G L+ A+   D+M
Sbjct: 371 KSDIPSNRISVDN--ALIAMYSKCGNLQDARRLFDRM 405



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 191/415 (46%), Gaps = 23/415 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++S+ + +G      ++  L++++ K  D   A R  +     RD +++N++I    + 
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            +   AL LF  +  +GL  D FT +S++ A   L++       HG  +K GF    ++ 
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278

Query: 117 SGFIENYAKSGEIVS-AEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLG 174
           SG I+ Y+K G  +S     F +  + D V +  MV GY  N EF + + E F +M+ +G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338

Query: 175 LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              N+ S   V+ A  ++    +G+QIH   +K    S   + ++NA++ +Y +CG   D
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRIS-VDNALIAMYSKCGNLQD 397

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD + E + VS +  IA  A  G+  E+  LF+ +          T I++LS+   
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457

Query: 289 E-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWN 346
             R+            K          + +I + G+ G++++A ++   + F   S+ W 
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWA 517

Query: 347 SMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
           S++     +G    A+     +L+        + ++ N Y  A   E V+  +  
Sbjct: 518 SLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 36/208 (17%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F  +LK C A  DL  GK++H L +K+      +  +  I +Y KCG +  A++AF+ I 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 541 RDSLAGWNAMMMGYAQ-------HGCYHEVSN------------------------LFNK 569
             ++  +NA++  YA+       H  + ++                          LF+ 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 570 MSKFGVKPDEITYLAVLTSCC-HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           M + G+  D  T  AV+T+CC   GL+ +    L  ++   G    +     ++   G+ 
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           G L+ AK     M    D   W S++ A
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVA 214


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 213/734 (29%), Positives = 380/734 (51%), Gaps = 21/734 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLAR 58
           ++  L++ GH  +  L   LI  +    +    R AF+       + +  YN ++S   +
Sbjct: 64  VHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASI--KAVACYNQMLSAYGK 121

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG--FSSRV 113
                 AL+L+ R+  +G  PD  T+  ++ +C   GSL+E   +H   ++        +
Sbjct: 122 NGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNL 181

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            L +  +  Y K G +  A   F    + D V++T+M+  Y  NG  D++ +++ +M + 
Sbjct: 182 SLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDAD 241

Query: 174 GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           G++ +  + T+ L A   + +G+ IH   V     S   + + +A++N+Y RCG    A 
Sbjct: 242 GIQPDSITFTSALLACTKLVDGKAIHARIVSSNMES---DFVGSALINMYARCGDVSSAR 298

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           + F++I    VV W+  + A    C   EA  L+  +       +  T +  L +     
Sbjct: 299 QAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLG 358

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMI 349
            L+ GK I +  ++ GF  +V +  AL++MY KCG+++ AR++F+ +  K +V  W +MI
Sbjct: 359 ALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMI 417

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y++ G   +AL+++  M+     PN YT +++L A S+S  L+  M++H H+  S   
Sbjct: 418 SAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELA 477

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            + ++ + L+T Y KC +L  +K       +K+ V  NA+           EAL+LY+T+
Sbjct: 478 SNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTM 537

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR-YDQDIFVESAVIDMYCKCGT 528
                  +  T +  L ACA    L+ G+ IH   LK + +   + V++A+++MY +CG 
Sbjct: 538 TSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGR 597

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E A+  F  + +  +  W AM   YAQ G   +V +L+ +M   G++P+EIT+ ++L  
Sbjct: 598 LETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVG 657

Query: 589 CCHAGLV-REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           C HAGL+ R    +L   S+ H ++P  EH+ C+VDLLGR G L  A+  ++ MP  PD+
Sbjct: 658 CSHAGLLARGVECFLEMQSE-HEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDS 716

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
             W ++L +C  + + D    A  ++ EL P+N S Y LLS+++ +AG+  +  +++  M
Sbjct: 717 VAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSM 776

Query: 708 KEKFLCKEPGYSWI 721
           KE  L K PG S I
Sbjct: 777 KEMGLKKPPGQSLI 790



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 184/596 (30%), Positives = 296/596 (49%), Gaps = 25/596 (4%)

Query: 84  FSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +  L++ CG   SL E ++VH   L+ G     +L +  I+ Y   GEI  A   F++  
Sbjct: 45  YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104

Query: 141 DLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGE 196
            +  VA Y  M+  Y  NG ++++ E++  M   G E ++ +   VLG   A   ++E  
Sbjct: 105 SIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA-- 254
           +IH   ++   +      L NA++N+Y +CG   +A K+FD I   D VSW+  I++   
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYAN 224

Query: 255 ---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
              CD  EA  L++ +  +  Q +  T  + L +      L  GK I A       ME  
Sbjct: 225 NGFCD--EALDLYQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSN-MESD 278

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            +G+ALI+MY +CG V+ AR  F+ +  K  V W S++  Y +   + +ALD++  M   
Sbjct: 279 FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHE 338

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALN 429
            +  +G T  + L A ++  +LK+   +HS + + GF    S++  + L+T Y KC  L+
Sbjct: 339 GVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF---QSLVVHTALLTMYAKCGELD 395

Query: 430 ESKRVLSEIDKKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++ V + + +K  V+   A+ S    A    EALELY  +       N  TFS VL AC
Sbjct: 396 AARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAAC 455

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           ++  DLE G  IH     +    ++ V++A++ MY KCG++E AK AF    R  L  WN
Sbjct: 456 SSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWN 515

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           AM+  YAQHG   E  +L+  M+  GV PDE+T  + L++C  +G ++  R   S +   
Sbjct: 516 AMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKN 575

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
                 L     +V++ GR G LE A+   + M    D   W ++ SA    G+ D
Sbjct: 576 QSFRSSLMVQTALVNMYGRCGRLETARSMFEDMG-QRDVLSWTAMTSAYAQQGHAD 630



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 215/423 (50%), Gaps = 13/423 (3%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFK 340
           LL   G    L  GK +     + G      +GN LI MYG CG+++ AR+ F ++   K
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
               +N M++ Y +NG +N+AL+++  M E    P+  T   +L + S   SL++A ++H
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167

Query: 401 SHIIKSGFLLDD--SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           + II++  ++ D  S+ + L+  YGKC ++ E+++V   I  ++AV   ++ S       
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             EAL+LY+ +     + +  TF+  L AC  + D   GKAIH   + +  + D FV SA
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESD-FVGSA 283

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +I+MY +CG +  A++AF KI    +  W ++M  Y Q   Y E  +L+ +M   GV  D
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
            +TY+  L +C   G ++E +   S + +  G    + H A ++ +  + G L+ A+   
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFEC-GFQSLVVHTA-LLTMYAKCGELDAARAVF 401

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           +++    + + W +++SA    G+    L L    + E    NE T+   SN+ A+    
Sbjct: 402 NRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTF---SNVLAACSSS 458

Query: 698 NDV 700
            D+
Sbjct: 459 GDL 461


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 218/692 (31%), Positives = 359/692 (51%), Gaps = 18/692 (2%)

Query: 68  LFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSGFIENY 123
             D  R  G R        ++K CGS+ +  +   +HG+C++ G     V + +  ++ Y
Sbjct: 90  FLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMY 149

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K   +V     F      + V +T+++ GY+ +G      E+F  MR+ G+  N  +  
Sbjct: 150 MKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFA 209

Query: 184 AVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +VL        V  G ++H   VK G  S V   + N++MN+Y +CG   +A  +F  + 
Sbjct: 210 SVLSVVASQGMVDLGRRVHAQSVKFGCCSTV--FVCNSLMNMYAKCGLVEEARVVFCGME 267

Query: 241 EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             D+VSW+  +A        +EA  LF D R +   + + T   ++      + L   +Q
Sbjct: 268 TRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQ 327

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENG 356
           + +   K GF    ++  AL+  Y K GQ+ +A  IF  +   ++ VSW +MI G  +NG
Sbjct: 328 LHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNG 387

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
               A  +F  M E  + PN +T ++IL A  +  SL    Q+H+ +IK+ +     + +
Sbjct: 388 DVPLAAALFSRMREDGVAPNDFTYSTILTA--SVASLPP--QIHAQVIKTNYECTSIVGT 443

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+ +Y K     E+  +   ID+K+ V  +A+ +    A     A  ++  +     + 
Sbjct: 444 ALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKP 503

Query: 477 NGSTFSIVLKACAAMT-DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           N  T S V+ ACA+ T  ++ G+  H +++K R    + V SA++ MY + G+IE A+  
Sbjct: 504 NEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCI 563

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F +     L  WN+M+ GYAQHG   +  ++F +M   G++ D +T+L+V+  C HAGLV
Sbjct: 564 FERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLV 623

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            E + Y   M+  +G+ P +EHYAC+VDL  R G L+ A   I+ M  P    +W++LL 
Sbjct: 624 EEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLG 683

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++ N++LG LA  KLL L+P + +TYVLLSN+Y++AG W +  ++RK M  K + KE
Sbjct: 684 ACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKE 743

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            G SWI +    H F A D SH  S++IY +L
Sbjct: 744 AGCSWIQIKNKVHSFIASDKSHPLSEQIYAKL 775



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 265/548 (48%), Gaps = 25/548 (4%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKF---ADFRRAFRFLFDTQNRDIITYNALISGL 56
           Q++ L I+ GH    + + T+L+  + K+    D R+ F  +     R+++T+ +L++G 
Sbjct: 124 QLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM---PKRNVVTWTSLLTGY 180

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFS---SLVKACGSLQENEIVHGVCLKLGFSSRV 113
            +       ++LF R+R +G+ P++ TF+   S+V + G +     VH   +K G  S V
Sbjct: 181 IQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTV 240

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  +  YAK G +  A + F      D V++  ++ G V NG   ++ ++F + RS 
Sbjct: 241 FVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSS 300

Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
              L + +   V+    ++K+     Q+H   +K GF S    ++  A+M+ Y + GQ  
Sbjct: 301 ITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHS--YGNVMTALMDAYSKAGQLG 358

Query: 231 DAVKMFDEIT-EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           +A+ +F  ++   +VVSW+  I       D   A  LF  +R +    N++T   +L++ 
Sbjct: 359 NALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA- 417

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               +     QI A   K  +     +G AL++ Y K     +A SIF  +  KD VSW+
Sbjct: 418 ---SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWS 474

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIK 405
           +M+  Y++ G  + A ++F  M    L PN +T++S+++A  S +  +    Q H+  IK
Sbjct: 475 AMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIK 534

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
                   + S L++ Y +  ++  ++ +      ++ V  N++ S         +AL++
Sbjct: 535 HRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDV 594

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYC 524
           +R +     E++G TF  V+  CA    +E+G+     +A        +   + ++D+Y 
Sbjct: 595 FRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYS 654

Query: 525 KCGTIEDA 532
           + G +++A
Sbjct: 655 RAGKLDEA 662



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/361 (21%), Positives = 176/361 (48%), Gaps = 13/361 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNRDIITYNALISGLARF 59
           Q++S ++K G H    + T L+  ++K      A   FL  + +++++++ A+I+G  + 
Sbjct: 327 QLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQN 386

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
                A  LF R+R  G+ P+ FT+S+++ A  +    +I H   +K  +     + +  
Sbjct: 387 GDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQI-HAQVIKTNYECTSIVGTAL 445

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           + +Y+K      A   F+     D V+++AM+  Y   G+ D +  +F++M   GL+ NE
Sbjct: 446 LASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNE 505

Query: 180 FSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           F++++V+ A    +  V  G Q H   +K      +C  +++A++++Y R G    A  +
Sbjct: 506 FTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALC--VSSALVSMYARKGSIESAQCI 563

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+  T+ D+VSW+  ++         +A  +F+ +     +++  T ++++       ++
Sbjct: 564 FERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLV 623

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
             G++   +     G    +     ++ +Y + G++++A S+ + + F    + W +++ 
Sbjct: 624 EEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLG 683

Query: 351 G 351
            
Sbjct: 684 A 684


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 239/738 (32%), Positives = 372/738 (50%), Gaps = 68/738 (9%)

Query: 79  PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRV-YLVSGFIENYAKSGEIVSAEMCFR 137
           P      SL++ C +L   ++ H      GF+    Y V  +IE  A S E VS  +  R
Sbjct: 28  PPTIPLISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGA-SAEAVS--LLQR 84

Query: 138 DCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---K 193
                  V  + A++   V  G  D +   + +M+ LG   + ++   VL A  ++   +
Sbjct: 85  LIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLR 144

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE---PDVVSWSER 250
            G  +H      G  S V   + N+I+ +Y RCG   DA +MFDE+ E    D+VSW+  
Sbjct: 145 HGASVHAIVCANGLGSNV--FICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSI 202

Query: 251 IAAACDGVEAFGLFK-DLRFND-----FQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +AA   G ++    +   R  +      + +  T++N+L +      L+ GKQ+  F  +
Sbjct: 203 LAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVR 262

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN----- 359
            G ++ V +GNAL+SMY KC ++N+A  +F+ +  KD VSWN+M+ GYS+ G F+     
Sbjct: 263 NGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSL 322

Query: 360 ------------------------------QALDMFCHMLEFSLIPNGYTMASILEAVSN 389
                                         +ALD+F  M  + L PN  T+AS+L   ++
Sbjct: 323 FKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCAS 382

Query: 390 SKSLKQAMQVHSHIIKSGFLL------DDSMI-SCLITTYGKCNALNESKRVLSEIDKKN 442
             +L    Q H+++IK+   L      DD ++ + LI  Y KC +   ++ +   I+ K+
Sbjct: 383 VGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKD 442

Query: 443 AVHINALASVLVYASCHAEA---LELYRTIWG--SCREVNGSTFSIVLKACAAMTDLEQG 497
              +     +  YA  H EA   L+L+  I+   +  + N  T S  L ACA + +L  G
Sbjct: 443 KNVVTWTVMIGGYAQ-HGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLG 501

Query: 498 KAIHCLALKARYDQDI-FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           + +H  AL+   + ++ +V + +IDMY K G I+ A+  F  +   ++  W ++M GY  
Sbjct: 502 RQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGM 561

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           HG   E  +LF++M K G   D IT+L VL +C H+G+V +   Y   M    G+ P  E
Sbjct: 562 HGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAE 621

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HYAC+VDLLGR G L  A   I  M + P A +W +LLSA  I+ NI+LG  A SKL EL
Sbjct: 622 HYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTEL 681

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
             +N+ +Y LLSNLYA+A  W DV ++R  MK   + K PG SWI     T  F+ GD S
Sbjct: 682 GAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRS 741

Query: 737 HSQSKEIYKELIKLYEHM 754
           H +S++IY  L+ L + +
Sbjct: 742 HPESEQIYNLLLDLIKRI 759



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 235/517 (45%), Gaps = 70/517 (13%)

Query: 46  IITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHG 102
           +  +NALI    +       L  + +++  G  PD +TF  ++KACG   SL+    VH 
Sbjct: 92  VFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHA 151

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGE 159
           +    G  S V++ +  +  Y + G +  A   F + L+    D V++ +++  YV  G+
Sbjct: 152 IVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQ 211

Query: 160 FDKSKEVFVEM---RSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCN 213
              +  +   M    SL L  +  +L  +L A    F ++ G+Q+HGF V+ G +  V  
Sbjct: 212 SRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDV-- 269

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---------------------- 251
            + NA++++Y +C +  +A K+F+ I + DVVSW+  +                      
Sbjct: 270 FVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEE 329

Query: 252 ----------------AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
                           A    G EA  +F+ ++    + N  T+ +LLS       L  G
Sbjct: 330 DIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYG 389

Query: 296 KQIQAFCYKVGF-------MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWN 346
           KQ  A+  K           + + + N LI MY KC     ARSIFD +  KD   V+W 
Sbjct: 390 KQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWT 449

Query: 347 SMIAGYSENGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            MI GY+++G  N AL +F  +   + SL PN +T++  L A +    L+   Q+H++ +
Sbjct: 450 VMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYAL 509

Query: 405 KSGFLLDDSMI----SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           ++    ++S +    +CLI  Y K   ++ ++ V   +  +N V   +L +         
Sbjct: 510 RNE---NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGE 566

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           EAL L+  +      V+G TF +VL AC+    ++QG
Sbjct: 567 EALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQG 603



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 230/499 (46%), Gaps = 63/499 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           +++++  NG   +  +  ++++ + +     D  + F  + + +  DI+++N++++   +
Sbjct: 149 VHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQ 208

Query: 59  FCQSGPALKLFDRLRYQ---GLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
             QS  AL++  R+       LRPDA T  +++ AC S   LQ  + VHG  ++ G    
Sbjct: 209 GGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDD 268

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V++ +  +  YAK  ++  A   F      D V++ AMV GY   G FD +  +F  M+ 
Sbjct: 269 VFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQE 328

Query: 173 LGLELNEFSLTAVLGA---------SFDVKEGEQIHGFGVKV----GFLSG--------- 210
             ++L+  + +AV+           + DV    Q++G    V      LSG         
Sbjct: 329 EDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLY 388

Query: 211 --------VCNHLN-------------NAIMNLYVRCGQKLDAVKMFDEITEPD--VVSW 247
                   + N LN             N ++++Y +C     A  +FD I   D  VV+W
Sbjct: 389 GKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTW 448

Query: 248 SERI---AAACDGVEAFGLFKDL--RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +  I   A   +  +A  LF  +  +    + N +T+   L +      LR G+Q+ A+ 
Sbjct: 449 TVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYA 508

Query: 303 YK-VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
            +     EV+ +GN LI MY K G ++ AR++FD +  ++ VSW S++ GY  +G   +A
Sbjct: 509 LRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEA 568

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLI 419
           L +F  M +     +G T   +L A S+S  + Q M ++ H +  GF +       +C++
Sbjct: 569 LHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGM-IYFHDMVKGFGITPGAEHYACMV 627

Query: 420 TTYGKCNALNESKRVLSEI 438
              G+   LNE+  ++  +
Sbjct: 628 DLLGRAGRLNEAMELIKNM 646



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 147/280 (52%), Gaps = 34/280 (12%)

Query: 1   QIYSLLIKNGHHL-------DPILSTTLISHFTKFADFRRAFRFLFDT---QNRDIITYN 50
           Q ++ +IKN  +L       D ++   LI  + K   +R A R +FD+   ++++++T+ 
Sbjct: 391 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVA-RSIFDSIEGKDKNVVTWT 449

Query: 51  ALISGLARFCQSGPALKLFDRLRYQ--GLRPDAFTFSSLVKACGSLQENEI---VHGVCL 105
            +I G A+  ++  ALKLF ++  Q   L+P+AFT S  + AC  L E  +   +H   L
Sbjct: 450 VMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYAL 509

Query: 106 KLGFSSRV-YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKS 163
           +    S V Y+ +  I+ Y+KSG+I +A   F D + L N V++T+++ GY  +G  +++
Sbjct: 510 RNENESEVLYVGNCLIDMYSKSGDIDAARAVF-DNMKLRNVVSWTSLMTGYGMHGRGEEA 568

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEG-----EQIHGFGVKVGFLSGVCNHL 215
             +F +M+ LG  ++  +   VL A   S  V +G     + + GFG+  G     C   
Sbjct: 569 LHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYAC--- 625

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAA 254
              +++L  R G+  +A+++   ++ EP  V W   ++A+
Sbjct: 626 ---MVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSAS 662



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 169/368 (45%), Gaps = 35/368 (9%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDI----ITYNALISGLARFCQSGPALKLF 69
           D +    +++ +++   F  A       Q  DI    IT++A+I+G A+      AL +F
Sbjct: 299 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVF 358

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSL-------QENEIVHGVCLKLGFSSR---VYLVSGF 119
            +++  GL P+  T +SL+  C S+       Q +  V    L L ++ +   + +++G 
Sbjct: 359 RQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGL 418

Query: 120 IENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGL 175
           I+ YAK      A   F   +  D + V +T M+ GY  +GE + + ++F ++  +   L
Sbjct: 419 IDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSL 478

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + N F+L+  L A   + E   G Q+H + ++    S V  ++ N ++++Y + G    A
Sbjct: 479 KPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVL-YVGNCLIDMYSKSGDIDAA 537

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD +   +VVSW+  +        G EA  LF  ++   F ++  T + +L +    
Sbjct: 538 RAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHS 597

Query: 290 RILRAG-----KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS-V 343
            ++  G       ++ F    G          ++ + G+ G++N+A  +   +  + + V
Sbjct: 598 GMVDQGMIYFHDMVKGFGITPGAEHYA----CMVDLLGRAGRLNEAMELIKNMSMEPTAV 653

Query: 344 SWNSMIAG 351
            W ++++ 
Sbjct: 654 VWVALLSA 661


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 322/572 (56%), Gaps = 14/572 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
           G  +H   +K G LS +   ++N ++NLY +CG  + A +MFDE+++ ++VSWS  I+  
Sbjct: 22  GLSLHAAALKTGMLSDII--VSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGY 79

Query: 254 --ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                 + A  LF  +R      NEY   +++S+      L  G Q+ A   K+G + V 
Sbjct: 80  DQTGQPLLALNLFSQMRIVP---NEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVS 136

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + NALISMY KCG   DA  + + +   ++VS+N++IAG+ EN    + ++ F  M + 
Sbjct: 137 FVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQK 196

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALN 429
              P+ +T + +L   ++     + MQ+H  +IK    L+DS    + +IT Y K N + 
Sbjct: 197 GFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLN--LEDSAFIGNVIITMYSKFNLIE 254

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC-REVNGSTFSIVLKAC 488
           E+++V   I +K+ +  N L +   +   H  AL ++R +   C  + +  TF+ VL AC
Sbjct: 255 EAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAAC 314

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +  +  GK IH   ++ R  QD+ V +A+++MY KCG+I+++   FR+    +L  WN
Sbjct: 315 AGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWN 374

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            ++  +  HG        F KM   G+ PD +T++ +LT+C HAGLV E + Y + M + 
Sbjct: 375 TIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEA 434

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           +G+ P +EH++C++DLLGR G L+ A+  ++++P   D  I  SLLSAC ++G++ +G  
Sbjct: 435 YGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEH 494

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
             ++LL+LQP   S YVLLSNLYAS  MW  V +  K +K   L KEPG+S I V G   
Sbjct: 495 LATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLIDVMGMFE 554

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHMVATAKL 760
            F  GD SHS+ +EI K+ IK+    V+   +
Sbjct: 555 KFTMGDLSHSRIEEI-KDTIKMLNWTVSEVSI 585



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 225/449 (50%), Gaps = 18/449 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++  +K G   D I+S  +I+ ++K  +   A R   +  +R++++++A+ISG  +  Q
Sbjct: 25  LHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQ 84

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              AL LF ++R   + P+ + F+S++ AC SL    +   VH   LKLG  S  ++ + 
Sbjct: 85  PLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNA 141

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y K G    A +      + + V+Y A++ G+V N + +K  E F  MR  G   +
Sbjct: 142 LISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPD 201

Query: 179 EFSLTAVLG--ASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+ + +LG   S+ D   G Q+H   +K+         + N I+ +Y +     +A K+
Sbjct: 202 RFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSA--FIGNVIITMYSKFNLIEEAEKV 259

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDF-QINEYTMINLLSSVGGERI 291
           F  I E D++SW+  + A C   D   A  +F+D+    F + +++T   +L++  G   
Sbjct: 260 FGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLAS 319

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +R GKQI     +    + V + NAL++MY KCG + ++  +F     ++ VSWN++IA 
Sbjct: 320 IRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAA 379

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS--GFL 409
           +  +G   +AL+ F  M    + P+  T   +L A  N   L +  QV+ + ++   G  
Sbjct: 380 FGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTAC-NHAGLVEEGQVYFNSMEEAYGIF 438

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
            +    SCLI   G+   L E++  + ++
Sbjct: 439 PNIEHFSCLIDLLGRAGRLQEAEEYMEKL 467



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 220/452 (48%), Gaps = 21/452 (4%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LK G  S + + +  I  Y+K G ++ A   F +  D + V+++A++ GY   G+
Sbjct: 25  LHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQ 84

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLN 216
              +  +F +MR +    NE+   +V+ A      + +G Q+H   +K+G +S   + ++
Sbjct: 85  PLLALNLFSQMRIVP---NEYVFASVISACASLTALSQGLQVHAQSLKLGCVS--VSFVS 139

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD------GVEAFGLFKDLRFN 270
           NA++++Y++CG   DA+ + + ++EP+ VS++  IA   +      G+EA   FK +R  
Sbjct: 140 NALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEA---FKVMRQK 196

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
            F  + +T   LL           G Q+     K+   +   IGN +I+MY K   + +A
Sbjct: 197 GFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEA 256

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSN 389
             +F  +  KD +SWN+++          +AL +F  ML+   + P+ +T A +L A + 
Sbjct: 257 EKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAG 316

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
             S++   Q+H H+I++    D  + + L+  Y KC ++  S  V      +N V  N +
Sbjct: 317 LASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTI 376

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +        A ALE +  +       +  TF  +L AC     +E+G+ ++  +++  Y
Sbjct: 377 IAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQ-VYFNSMEEAY 435

Query: 510 DQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI 539
                +E  S +ID+  + G +++A+    K+
Sbjct: 436 GIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKL 467



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 7/218 (3%)

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           +IP    + S+L   +  K+    + +H+  +K+G L D  + + +I  Y KC  +  ++
Sbjct: 1   MIPEA--IGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFAR 58

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKACAAM 491
           R+  E+  +N V  +A+ S          AL L+  +    R V N   F+ V+ ACA++
Sbjct: 59  RMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQM----RIVPNEYVFASVISACASL 114

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           T L QG  +H  +LK       FV +A+I MY KCG   DA      +   +   +NA++
Sbjct: 115 TALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALI 174

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            G+ ++    +    F  M + G  PD  T+  +L  C
Sbjct: 175 AGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGIC 212



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 97/193 (50%), Gaps = 6/193 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  +IK        +   +I+ ++KF     A +     + +D+I++N L++    FC
Sbjct: 223 QLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACC-FC 281

Query: 61  QSGP-ALKLF-DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
           +    AL++F D L    ++PD FTF+ ++ AC    S++  + +HG  ++      V +
Sbjct: 282 KDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGV 341

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  YAK G I ++   FR   D + V++  ++  +  +G   ++ E F +M+++G+
Sbjct: 342 SNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGI 401

Query: 176 ELNEFSLTAVLGA 188
             +  +   +L A
Sbjct: 402 HPDSVTFVGLLTA 414



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  LI+   + D  +S  L++ + K    + ++     T +R+++++N +I+      
Sbjct: 325 QIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHG 384

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
               AL+ F++++  G+ PD+ TF  L+ AC   G ++E ++
Sbjct: 385 LGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQV 426


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 213/666 (31%), Positives = 352/666 (52%), Gaps = 18/666 (2%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGE--IVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           H   LK G ++     +  +  Y++S    + +A   F +    D V++ A++     +G
Sbjct: 14  HASLLKSGVAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
              ++  +   M + GL  N F+L + L ++   +    G Q+    +K G  + V    
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNV--FA 130

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDF 272
            +A++++Y +CG+  DA ++FD + E + VSW+  IA    + D   A  LF ++     
Sbjct: 131 ASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGL 190

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             +E T  +LL++V G        Q+     K G    +++ NA I+ Y +CG + D+R 
Sbjct: 191 APDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRR 249

Query: 333 IFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVS-N 389
           IFD +   +D +SWN+M+  Y+ NG  ++A+  F  M++ S + P+ Y+  SI+ + S +
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA---LNESKRVLSEIDKKNAVHI 446
                Q   +H  +IKS       + + LI  Y + N    + ++ +  + +  K+ V  
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N++ +        A+AL+ +R +       +   FS  L++ + +  L+ GK IH L + 
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIH 429

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
           + +  + FV S++I MY K G I+DA+++F +  + S   WNAM+ GYAQHG    V  L
Sbjct: 430 SGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDIL 489

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           FN+M +     D IT++ ++TSC HAGLV E    L+ M   +G+  ++EHYAC VDL G
Sbjct: 490 FNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYG 549

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R G L+ AK  ID MP  PDA +W +LL AC I+GN++L     S L   +P   STYVL
Sbjct: 550 RAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVL 609

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           LS++Y+  GMW+D   +++ MK++ L K PG+SWI V    H F A D SH +  EIY+ 
Sbjct: 610 LSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEM 669

Query: 747 LIKLYE 752
           L  L +
Sbjct: 670 LRVLLQ 675



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 270/554 (48%), Gaps = 30/554 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQ 61
           ++ L+K+G       +  L ++     D   A R +FD    RD +++NAL++  A    
Sbjct: 14  HASLLKSGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGA 73

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A +L   +  QGL  + F   S +++    +   I   +  + LK G ++ V+  S 
Sbjct: 74  HPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASA 133

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A   F    + + V++ A++ GY  +G+   + E+F+EM   GL  +
Sbjct: 134 LLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPD 193

Query: 179 EFS----LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           E +    LTAV G S  +    Q+HG  VK G   G+   + NA +  Y +CG   D+ +
Sbjct: 194 EATFASLLTAVEGPSCFLM--HQLHGKIVKYGSALGLT--VLNAAITAYSQCGSLKDSRR 249

Query: 235 MFDEITE-PDVVSWSERIAA-ACDGV--EAFGLF-KDLRFNDFQINEYTMINLLSSVGGE 289
           +FD I +  D++SW+  + A   +G+  EA   F + ++ +    + Y+  +++SS    
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309

Query: 290 -RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ---VNDARSIFDYLIFKDSVSW 345
                 G+ I     K     V  + NALI+MY +  +   + DA   F+ L+ KD+VSW
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NSM+ GYS++G    AL  F  M   ++  + Y  ++ L + S    L+   Q+H  +I 
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIH 429

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE- 464
           SGF  +D + S LI  Y K   ++++++   E DK ++V  NA+  +  YA  H +A   
Sbjct: 430 SGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAM--IFGYAQ-HGQAENV 486

Query: 465 --LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV--I 520
             L+  +      ++  TF  ++ +C+    +++G  I    ++ +Y   + +E     +
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVPLRMEHYACGV 545

Query: 521 DMYCKCGTIEDAKR 534
           D+Y + G ++ AK+
Sbjct: 546 DLYGRAGQLDKAKK 559



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 218/458 (47%), Gaps = 27/458 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ SL +K+G   +   ++ L+  + K    R A +       R+ +++NALI+G     
Sbjct: 114 QLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA-----CGSLQENEIVHGVCLKLGFSSRVYL 115
               AL+LF  +  +GL PD  TF+SL+ A     C  + +   +HG  +K G +  + +
Sbjct: 174 DMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQ---LHGKIVKYGSALGLTV 230

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSL 173
           ++  I  Y++ G +  +   F    D+ D +++ AM+  Y  NG  D++ + FV  M+  
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290

Query: 174 GLELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCG 227
           G+  + +S T+++ +      D  +G  IHG  +K     ++ VC    NA++ +Y R  
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVC----NALIAMYTRYN 346

Query: 228 QKL---DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN 281
           +     DA K F+ +   D VSW+  +          +A   F+ +   + + +EY    
Sbjct: 347 ENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSA 406

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
            L S     +L+ GKQI       GF     + ++LI MY K G ++DAR  F+      
Sbjct: 407 ALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSS 466

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-H 400
           SV WN+MI GY+++G       +F  ML+     +  T   ++ + S++  + +  ++ +
Sbjct: 467 SVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILN 526

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +   K G  L     +C +  YG+   L+++K+++  +
Sbjct: 527 TMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSM 564



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 17/277 (6%)

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKC--NALNESKRVLSEIDKKNAVHINALASVL 453
           A + H+ ++KSG +   +  + L+T Y +   + L  ++RV  E+ +++ V  NAL +  
Sbjct: 10  AARSHASLLKSG-VAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQ 68

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +  H EA  L R +       N       L++ A       G  +  LALK+    ++
Sbjct: 69  AASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNV 128

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           F  SA++D+Y KCG + DA++ F  +   +   WNA++ GY + G       LF +M + 
Sbjct: 129 FAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMERE 188

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ------LEHYACIVDLLGR 627
           G+ PDE T+ ++LT+      V     +L  M  LHG I +      L      +    +
Sbjct: 189 GLAPDEATFASLLTA------VEGPSCFL--MHQLHGKIVKYGSALGLTVLNAAITAYSQ 240

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
            G L+ ++   D +    D   W ++L A T  G  D
Sbjct: 241 CGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDD 277


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 199/572 (34%), Positives = 306/572 (53%), Gaps = 8/572 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G+Q+H   +  G+    C  L N ++N+Y +CG+   A+K+FD + + ++VSW+  I
Sbjct: 21  LRRGKQLHALLICAGYTP--CTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78

Query: 252 AAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         EA   F  +R       ++   + + +      +  GKQ+     K G  
Sbjct: 79  SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG 138

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + +G+ L  MY KCG + DA  +F+ +  KD VSW +MI GYS+ G F +AL  F  M
Sbjct: 139 SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           ++  +  + + + S L A    K+ K    VHS ++K GF  D  + + L   Y K   +
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDM 258

Query: 429 NESKRVLSEIDK--KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
             +  V   ID   +N V    L    V      + L ++  +     E N  TFS ++K
Sbjct: 259 ESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACA    LEQG  +H   +K  +D+D FV S ++DMY KCG +E A +AF +I   +   
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIA 377

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN+++  + QHG   +    F +M   GVKP+ IT++++LT C HAGLV E   Y   M 
Sbjct: 378 WNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMD 437

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             +G++P  EHY+C++DLLGR G L+ AK  I++MP  P+A  W S L AC I+G+ ++G
Sbjct: 438 KTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMG 497

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
            LA  KL++L+P N    VLLSN+YA+   W DV  +R  M++  + K PGYSW+ VG  
Sbjct: 498 KLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYK 557

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           TH F A D SH +   IY++L  L + + A  
Sbjct: 558 THVFGAEDWSHXRKSAIYEKLDXLLDQIKAAG 589



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 233/450 (51%), Gaps = 15/450 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q+++LLI  G+     L+  L++ ++K  +   A + LFDT   R+++++ A+ISGL++ 
Sbjct: 26  QLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK-LFDTMPQRNLVSWTAMISGLSQN 84

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            +   A++ F  +R  G  P  F FSS ++AC   GS++  + +H + LK G  S +++ 
Sbjct: 85  SKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVG 144

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S   + Y+K G +  A   F +    D V++TAM+ GY   GEF+++   F +M    + 
Sbjct: 145 SNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVT 204

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +++  L + LGA   +K    G  +H   VK+GF S +   + NA+ ++Y + G    A 
Sbjct: 205 IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI--FVGNALTDMYSKAGDMESAS 262

Query: 234 KMFDEITE-PDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            +F   +E  +VVS++  I    +  +      +F +LR    + NE+T  +L+ +   +
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G Q+ A   K+ F E   + + L+ MYGKCG +  A   FD +     ++WNS++
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLV 382

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
           + + ++G    A+  F  M++  + PN  T  S+L   S++  +++ +     + K+ G 
Sbjct: 383 SVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +  +   SC+I   G+   L E+K  ++ +
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 228/481 (47%), Gaps = 25/481 (5%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L+  + +H + +  G++   +L +  +  Y+K GE+  A   F      + V++TAM+ G
Sbjct: 21  LRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISG 80

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSG 210
              N +F ++   F  MR  G    +F+ ++ + A      ++ G+Q+H   +K G  S 
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL 267
           +   + + + ++Y +CG   DA K+F+E+   D VSW+  I   +   +  EA   FK +
Sbjct: 141 L--FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
              +  I+++ + + L + G  +  + G+ + +   K+GF   + +GNAL  MY K G +
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDM 258

Query: 328 NDARSIFDY-LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
             A ++F      ++ VS+  +I GY E     + L +F  +    + PN +T +S+++A
Sbjct: 259 ESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKA 318

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +N  +L+Q  Q+H+ ++K  F  D  + S L+  YGKC  L  + +   EI     +  
Sbjct: 319 CANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAW 378

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG--------K 498
           N+L SV        +A++ +  +     + N  TF  +L  C+    +E+G        K
Sbjct: 379 NSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK 438

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQH 557
               +  +  Y       S VID+  + G +++AK    ++  +  A GW + +     H
Sbjct: 439 TYGVVPGEEHY-------SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIH 491

Query: 558 G 558
           G
Sbjct: 492 G 492



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 197/396 (49%), Gaps = 20/396 (5%)

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + +++ +    + LR GKQ+ A     G+     + N L++MY KCG+++ A  +FD + 
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            ++ VSW +MI+G S+N  F++A+  FC M     +P  +  +S + A ++  S++   Q
Sbjct: 68  QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 127

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H   +K G   +  + S L   Y KC A+ ++ +V  E+  K+ V   A+         
Sbjct: 128 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 187

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             EAL  ++ +      ++       L AC A+   + G+++H   +K  ++ DIFV +A
Sbjct: 188 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 247

Query: 519 VIDMYCKCGTIEDAKRAF--RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           + DMY K G +E A   F     CR+ +  +  ++ GY +     +  ++F ++ + G++
Sbjct: 248 LTDMYSKAGDMESASNVFGIDSECRN-VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 306

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLGRVGL 630
           P+E T+ +++ +C +   + +        + LH  + ++         + +VD+ G+ GL
Sbjct: 307 PNEFTFSSLIKACANQAALEQG-------TQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           LE A    D++  P +   W SL+S   ++G   LG
Sbjct: 360 LEHAIQAFDEIGDPTEI-AWNSLVS---VFGQHGLG 391


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 188/607 (30%), Positives = 320/607 (52%), Gaps = 69/607 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQ 273
           N++++++ + G+  DA  +F E+ E D VSW+  +     A    EA     D+  + F 
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG-------- 325
             ++T+ N+LSS    +    G+++ +F  K+G    V + N++++MYGKCG        
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 326 -----------------------QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
                                  +++ A S+F+ +  +  VSWN+MIAGY++NG   +AL
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 363 DMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
            +F  ML E S+ P+ +T+ S+L A +N  +++   QVH++I+++    +  + + LI+T
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 422 YGKCNALNESKRVLSE---------------------------------IDKKNAVHINA 448
           Y K  ++  ++R++ +                                 ++ ++ V   A
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +         + EA++L+R++     E N  T + VL  CA++  L+ GK IHC A+++ 
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +Q   V +A+I MY + G+   A+R F ++C R     W +M++  AQHG   E   LF
Sbjct: 462 LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + GV+PD ITY+ VL++C HAG V E + Y   + + H + P++ HYAC+VDLL R
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            GL   A+  I +MP+ PDA  W SLLSAC ++ N +L  LA  KLL + P+N   Y  +
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+Y++ G W+D  ++ K  KEK + KE G+SW H+    H F A D  H Q   +Y   
Sbjct: 642 ANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMA 701

Query: 748 IKLYEHM 754
            +++E +
Sbjct: 702 ARMWEEI 708



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/549 (23%), Positives = 230/549 (41%), Gaps = 107/549 (19%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  +  +AKSG +  A   F +  + D V++T MV G    G F ++ +  ++M +
Sbjct: 98  VFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTA 157

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G    +F+LT VL +    +    G ++H F VK+G   G C  + N+++N+Y +CG  
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGL--GSCVPVANSVLNMYGKCGDS 215

Query: 230 LDAVKMFDEI-----------------------------TEPD--VVSWSERIAAACDG- 257
             A  +F+ +                             + PD  +VSW+  IA      
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275

Query: 258 --VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
              +A  LF + L  +    +E+T+ ++LS+      +R GKQ+ A+  +        + 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 315 NALISMYGKCGQVNDARSIFD---------------------------------YLIFKD 341
           NALIS Y K G V +AR I D                                  +  +D
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V+W +MI GY +NG  ++A+D+F  M+     PN YT+A++L   ++   L    Q+H 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHA 460
             I+S      S+ + +IT Y +  +   ++R+  ++  +K  +   ++   L       
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EA+ L+  +  +  E +  T+  VL AC+    + +GK         RY   I  E  + 
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGK---------RYYDQIKNEHQIA 566

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
                                  ++ +  M+   A+ G + E      +M    V+PD I
Sbjct: 567 ---------------------PEMSHYACMVDLLARAGLFSEAQEFIRRMP---VEPDAI 602

Query: 581 TYLAVLTSC 589
            + ++L++C
Sbjct: 603 AWGSLLSAC 611



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 139/596 (23%), Positives = 241/596 (40%), Gaps = 117/596 (19%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           +L+S F K      A     +   RD +++  ++ GL R  + G A+K    +   G  P
Sbjct: 103 SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTP 162

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE-------- 128
             FT ++++ +C   Q   +   VH   +KLG  S V + +  +  Y K G+        
Sbjct: 163 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVF 222

Query: 129 -------------IVS----------AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
                        +VS          AE  F    D   V++ AM+ GY  NG   K+ +
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 282

Query: 166 VFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVK--VGFLSGVCNHLNN-- 217
           +F  M     +  +EF++T+VL A     +V+ G+Q+H + ++  + + S V N L +  
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342

Query: 218 ---------------------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
                                      A++  YV+ G    A +MF  +   DVV+W+  
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 402

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF+ +     + N YT+  +LS       L  GKQI     +   
Sbjct: 403 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 462

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFC 366
            +  S+ NA+I+MY + G    AR +FD + + K++++W SMI   +++G   +A+ +F 
Sbjct: 463 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 522

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            ML   + P+  T   +L A S+                +GF                  
Sbjct: 523 EMLRAGVEPDRITYVGVLSACSH----------------AGF------------------ 548

Query: 427 ALNESKRVLSEIDKKNAV-----HINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
            +NE KR   +I  ++ +     H   +  +L  A   +EA E  R +     E +   +
Sbjct: 549 -VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAW 604

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             +L AC    + E  + +    L +    +    SA+ ++Y  CG   DA R ++
Sbjct: 605 GSLLSACRVHKNAELAE-LAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWK 659



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L+ I  T L+  + K  D   A        NRD++ + A+I G  +  ++  A+ LF  +
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422

Query: 73  RYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              G  P+++T ++++  C S   L   + +H   ++        + +  I  YA+SG  
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 482

Query: 130 VSAEMCFRD-CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
             A   F   C   + + +T+M+     +G+ +++  +F EM   G+E +  +   VL A
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542

Query: 189 SFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDV 244
                 V EG++ +        ++   +H    +++L  R G   +A +    +  EPD 
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHY-ACMVDLLARAGLFSEAQEFIRRMPVEPDA 601

Query: 245 VSWSERIAA 253
           ++W   ++A
Sbjct: 602 IAWGSLLSA 610



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           +++F  ++++ M+ K G + DA+  F ++       W  M++G  + G + E       M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 571 SKFGVKPDEITYLAVLTSCC--HAGLV-REARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           +  G  P + T   VL+SC    AG V R+  +++  +  L   +P       ++++ G+
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVAN---SVLNMYGK 211

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
            G  E A    ++MP+      W +++S  T  G +DL       L E  PD
Sbjct: 212 CGDSETATTVFERMPV-RSVSSWNAMVSLNTHLGRMDL----AESLFESMPD 258


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 205/655 (31%), Positives = 355/655 (54%), Gaps = 31/655 (4%)

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           + +  +  Y+K G + +A   F     L D V++TAM      NG   ++  +  EM   
Sbjct: 81  VANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLES 140

Query: 174 GLELNEFSLTAVLGASFDVK----EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           GL  N F+L A   A F  +     G  + GF +K GF  G    +  A+++++ R G  
Sbjct: 141 GLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFW-GTDVSVGCALIDMFARNGDL 199

Query: 230 LDAVKMFDEITEPDVVSWS----ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           + A K+F+ + E  VV W+      +   C G +A  LF  +  + F+ + YTM +++S+
Sbjct: 200 VAARKVFNGLVERTVVVWTLMITRYVQGGCAG-KAVELFLGMLEDGFEPDGYTMSSMVSA 258

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND---ARSIFDYLIFKDS 342
              +     G+Q+ +   ++G +    +   L+ MY K         AR +F  +   + 
Sbjct: 259 CAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNV 318

Query: 343 VSWNSMIAGYSE-NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           +SW ++I+GY +  G  N A+++ C ML  S+ PN  T +S+L+A +N        Q+H+
Sbjct: 319 MSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHA 378

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            ++K+     + + + L++ Y +   + E+++   ++ ++N          L+  S    
Sbjct: 379 RVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERN----------LLSTSSDIG 428

Query: 462 ALELYRTIWGSCRE-----VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
                   W S  E     V+  TF+ +L A A +    +G+ +H L++K  ++ D  + 
Sbjct: 429 ETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGIS 488

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRD-SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
           ++++ MY +CG ++DA RAF ++  D ++  W +++   A+HG      +LF+ M   GV
Sbjct: 489 NSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGV 548

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           KP+++TY+AVL++C H GLV+E + Y   M   H LIP++EHYAC+VDLL R GL++ A 
Sbjct: 549 KPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEAL 608

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
             I++MP   DA +W++LL AC  Y NI++G +A   +++L+P + + YVLLSNLYA  G
Sbjct: 609 EFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGG 668

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +W++V ++R  M+ + L KE G SW+HVG   H F AGD+SH +++EIY +L  L
Sbjct: 669 LWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVL 723



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 264/556 (47%), Gaps = 24/556 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARFCQSGPALKLFDR 71
           D +++ +L++ ++K    R A R +FD     RD++++ A+   L R      AL L   
Sbjct: 78  DALVANSLLTMYSKCGHVR-AARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGE 136

Query: 72  LRYQGLRPDAFTFSSLVKAC--GSL--QENEIVHGVCLKLGF-SSRVYLVSGFIENYAKS 126
           +   GLRP+AFT  +   AC  G L       V G  +K GF  + V +    I+ +A++
Sbjct: 137 MLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARN 196

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G++V+A   F   ++   V +T M+  YV  G   K+ E+F+ M   G E + +++++++
Sbjct: 197 GDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMV 256

Query: 187 GASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEP 242
            A  +      G+Q+H   +++G +S  C       M   ++  Q ++ A K+F  +   
Sbjct: 257 SACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTH 316

Query: 243 DVVSWSERIAA--ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
           +V+SW+  I+    C G E  A  L  ++     + N  T  +LL +        +G+QI
Sbjct: 317 NVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQI 376

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
            A   K     V  +GNAL+SMY + G + +AR  FD L  ++ +S +S I    E G  
Sbjct: 377 HARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG---ETGRS 433

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
           N +       ++  +  + +T AS+L A +      +  Q+H+  IK+GF  D  + + L
Sbjct: 434 NASWSSQIESMDVGV--STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSL 491

Query: 419 ITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           ++ Y +C  L+++ R   E+ D  N +   ++ S L        AL L+  +  S  + N
Sbjct: 492 VSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPN 551

Query: 478 GSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
             T+  VL AC+ +  +++GK     +    R    +   + ++D+  + G +++A    
Sbjct: 552 DVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFI 611

Query: 537 RKI-CRDSLAGWNAMM 551
            ++ C+     W  ++
Sbjct: 612 NEMPCKADALVWKTLL 627



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 222/473 (46%), Gaps = 35/473 (7%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +   LI  F +  D   A +       R ++ +  +I+   +   +G A++LF  + 
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---SG 127
             G  PD +T SS+V AC   GS    + +H + L+LG  S   +  G ++ Y K     
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVW-NGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
            +  A   F+     + +++TA++ GYV   G+ + + E+  EM +  +E N  + +++L
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361

Query: 187 GASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            A  ++ +   G QIH   +K     G  N + NA++++Y   G   +A K FD++ E +
Sbjct: 362 KACANLSDQDSGRQIHARVMKTSI--GNVNVVGNALVSMYAESGCMEEARKAFDQLYERN 419

Query: 244 VVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           ++S S  I     G         +   D  ++ +T  +LLS+     +   G+Q+ A   
Sbjct: 420 LLSTSSDIGET--GRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSI 477

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMIAGYSENGFFNQAL 362
           K GF     I N+L+SMY +CG ++DA   FD +    +V SW S+I+  +++G   +AL
Sbjct: 478 KTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERAL 537

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITT 421
            +F  M+   + PN  T  ++L A S+   +K+  +    + K   L+      +C++  
Sbjct: 538 SLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDL 597

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
             +   + E+   ++E+                   C A+AL +++T+ G+CR
Sbjct: 598 LARSGLVQEALEFINEM------------------PCKADAL-VWKTLLGACR 631



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++L IK G   D  +S +L+S +++     D  RAF  + D  N  +I++ ++IS LA
Sbjct: 471 QLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHN--VISWTSIISALA 528

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   +  AL LF  +   G++P+  T+ +++ AC
Sbjct: 529 KHGHAERALSLFHDMILSGVKPNDVTYIAVLSAC 562



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 497 GKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMMG 553
           G+A+H   L     D D  V ++++ MY KCG +  A+R F  +   RD L  W AM   
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRD-LVSWTAMAFC 120

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
             ++G   E   L  +M + G++P+  T  A   +C    L R +
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSS 165


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/545 (37%), Positives = 317/545 (58%), Gaps = 9/545 (1%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           NAI+  Y +  + L A ++FD+I EPD+VS++  I+A  D  E   A GLF  +R     
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T+  ++++   +  L    Q+ +     GF   VS+ NAL++ YGK G ++DA+ +
Sbjct: 138 MDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195

Query: 334 FDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           F  +   +D VSWNSMI  Y ++   ++AL +F  M+   L  + +T+AS+L A +  + 
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALAS 451
           L   +Q H  +IK+GF  +  + S LI  Y KC   +++ ++V  EI + + V  N + S
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315

Query: 452 VLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
                    E ALE +R + G     N  +F  V+ AC+ ++   QGK IH LALK+   
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIP 375

Query: 511 QD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
            + I V++A+I MY KCG ++DA+R F ++   +    N+M+ GYAQHG   E  +LF  
Sbjct: 376 SNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQW 435

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M +  + P  IT+++VL++C H G V E   Y + M +   + P+ EHY+C++DLLGR G
Sbjct: 436 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 495

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L  A+  I +MP  P +  W SLL AC  +GNI+L + A +++L+L+P N + YV+LSN
Sbjct: 496 KLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 555

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +YASAG W +V  +RK M+++ + K+PG SWI V    H F A DSSH   KEIY+ L +
Sbjct: 556 MYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEE 615

Query: 750 LYEHM 754
           +   M
Sbjct: 616 MSGKM 620



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 226/418 (54%), Gaps = 23/418 (5%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----G 92
           LFD     D+++YN LIS  A   ++ PAL LF  +R  GL  D FT S+++ AC    G
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVG 155

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMV 151
            + +   +H V +  GF S V + +  +  Y K+G++  A+  F     + D V++ +M+
Sbjct: 156 LIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFL 208
             Y  + E  K+  +F EM   GL ++ F+L +VL A     D+  G Q HG  +K GF 
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 209 SGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAAACDGVE----AFGL 263
               +H+ + +++LY +CG  + D  K+F+EITEPD+V W+  ++      E    A   
Sbjct: 273 QN--SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYG 322
           F+ ++   ++ N+ + + ++S+         GKQI +   K       +S+ NALI+MY 
Sbjct: 331 FRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYS 390

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
           KCG + DAR +FD +   ++VS NSMIAGY+++G   ++L +F  MLE  + P   T  S
Sbjct: 391 KCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           +L A +++  +++    + +++K  F ++      SC+I   G+   L+E++ +++ +
Sbjct: 451 VLSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARM 507



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 244/509 (47%), Gaps = 21/509 (4%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  I  YAK    + A   F    + D V+Y  ++  Y   GE   +  +F  MR 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 173 LGLELNEFSLTAVLGASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +GL+++ F+L+AV+ A   DV    Q+H   V  GF S V   +NNA++  Y + G   D
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS--VNNALLTYYGKNGDLDD 191

Query: 232 AVKMFDEITE-PDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A ++F  +    D VSW+  I A     +G +A GLF+++      ++ +T+ ++L++  
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWN 346
               L  G Q      K GF +   +G+ LI +Y KC G ++D R +F+ +   D V WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311

Query: 347 SMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           +M++GYS+N  F   AL+ F  M      PN  +   ++ A SN  S  Q  Q+HS  +K
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK 371

Query: 406 SGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           S    +  S+ + LI  Y KC  L +++R+   + + N V +N++ +         E+L 
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 431

Query: 465 LYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           L++  W   R++  +  TF  VL ACA    +E+G     + +K +++ +   E  S +I
Sbjct: 432 LFQ--WMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNM-MKEKFNIEPEAEHYSCMI 488

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           D+  + G + +A+    ++  +  + GW +++     HG         N++    ++P  
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV--LQLEPSN 546

Query: 580 ITYLAVLTSC-CHAGLVREARTYLSCMSD 607
                VL++    AG   E  T    M D
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMRD 575



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 184/397 (46%), Gaps = 40/397 (10%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR--------- 331
           +LL +   ER L  GK + +   K          N  I +Y KCG++  AR         
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 332 ----------------------SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
                                  +FD +   D VS+N++I+ Y++ G    AL +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  L  +G+T+++++ A  +   L    Q+HS  + SGF    S+ + L+T YGK   L+
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 430 ESKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++KRV   +   ++ V  N++          ++AL L++ +      V+  T + VL A 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGW 547
             + DL  G   H   +K  + Q+  V S +ID+Y KC G + D ++ F +I    L  W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 548 NAMMMGYAQHGCYHEVS-NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY--LSC 604
           N M+ GY+Q+  + E +   F +M   G +P++ +++ V+++C +     + +    L+ 
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
            SD+      +++   ++ +  + G L+ A+   D+M
Sbjct: 371 KSDIPSNRISVDN--ALIAMYSKCGNLQDARRLFDRM 405



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 191/415 (46%), Gaps = 23/415 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++S+ + +G      ++  L++++ K  D   A R  +     RD +++N++I    + 
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            +   AL LF  +  +GL  D FT +S++ A   L++       HG  +K GF    ++ 
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278

Query: 117 SGFIENYAKSGEIVS-AEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLG 174
           SG I+ Y+K G  +S     F +  + D V +  MV GY  N EF + + E F +M+ +G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338

Query: 175 LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              N+ S   V+ A  ++    +G+QIH   +K    S   + ++NA++ +Y +CG   D
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRIS-VDNALIAMYSKCGNLQD 397

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD + E + VS +  IA  A  G+  E+  LF+ +          T I++LS+   
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457

Query: 289 E-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWN 346
             R+            K          + +I + G+ G++++A ++   + F   S+ W 
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWA 517

Query: 347 SMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
           S++     +G    A+     +L+        + ++ N Y  A   E V+  +  
Sbjct: 518 SLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 36/208 (17%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F  +LK C A  DL  GK++H L +K+      +  +  I +Y KCG +  A++AF+ I 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 541 RDSLAGWNAMMMGYAQ-------HGCYHEVSN------------------------LFNK 569
             ++  +NA++  YA+       H  + ++                          LF+ 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 570 MSKFGVKPDEITYLAVLTSCC-HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           M + G+  D  T  AV+T+CC   GL+ +    L  ++   G    +     ++   G+ 
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           G L+ AK     M    D   W S++ A
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVA 214


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 215/688 (31%), Positives = 358/688 (52%), Gaps = 16/688 (2%)

Query: 80  DAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D  T  S ++ C S   L++ +++H      GF S + L    I  Y    +  SAE+ F
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 137 R--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL----GASF 190
           +  DC  LD   + A++  Y  N  F ++ ++F ++        +F    V+    G   
Sbjct: 62  QTNDC-PLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            V  G +IH   +K G +  V   + +++MN+Y +C Q +DA+K+FDE  + DV  W+  
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDV--FVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAV 178

Query: 251 IAAAC-DGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    DG     L  F  ++   F+ N  T   ++SS      L  GK++     +   
Sbjct: 179 ISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRI 238

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +    + +AL+ MYGKCG +  A+ +F+ +  K++++WN+MI GYS  G     +++   
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMR 298

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M +    P   T+ SI+ A S S  L+    +H +I+++   +D  +   LI  Y KC  
Sbjct: 299 MNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGY 358

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           ++ ++ +   I K   V  N + S  V    H +AL +Y  +     + +  TFS  L A
Sbjct: 359 VSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSA 418

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C+ +  L++G+ +H   +  + + +  V  A++DMY KCG +++A++ F ++ +  L  W
Sbjct: 419 CSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSW 478

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            +M+  Y  HG   E   LF++M K  V+ D +T+LAVL++C HAGLV E   Y + M  
Sbjct: 479 TSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVV 538

Query: 608 LHGLIPQLEHYACIVDLLGRVGLL-EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            + + P +EHY+C++DLLGR G L E  ++         D  +  +L SAC ++ N  LG
Sbjct: 539 QYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLG 598

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
           +  G  L+E+ PD+ STY+LLSN+YAS   W++V K+R++MKE  L K PG SWI +   
Sbjct: 599 IQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQR 658

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHM 754
            H F+A D S+  +  +Y+ L  L  HM
Sbjct: 659 IHPFFAEDKSNPLADGVYECLNILGCHM 686



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 266/555 (47%), Gaps = 26/555 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARF 59
           I+  +   G   + +LS +LI  +    D+  A   +F T +   D+  +NAL+S     
Sbjct: 25  IHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASA-ELVFQTNDCPLDVSLWNALLSAYTNN 83

Query: 60  CQSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
            +   AL+LFD+L     +RPD +T+  ++KACG L        +H   LK G    V++
Sbjct: 84  FRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFV 143

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  +  YAK  + V A   F +    D   + A++  Y  +G+ + + + F +M+ LG 
Sbjct: 144 GSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGF 203

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E N  + T V+ +     +++ G+++H   ++   L      + +A++++Y +CG    A
Sbjct: 204 EPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDA--FVLSALVDMYGKCGCLEMA 261

Query: 233 VKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND--FQINEYTMINLLSSVG 287
            ++F++I   + ++W+  I       D      L   +R ND   +    T+ +++ +  
Sbjct: 262 KEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELL--MRMNDEGTKPTLMTLTSIIYASS 319

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               LR GK I  +  +      + I  +LI  Y KCG V+ A +IF  +   + VSWN 
Sbjct: 320 RSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNV 379

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI+G+   G   QAL ++ +M E  + P+  T +S L A S   +L +  ++H  II   
Sbjct: 380 MISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHK 439

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS--CHAEALEL 465
              ++ ++  L+  Y KC  ++E++++  ++ K++ V   ++  +  Y S    +EAL L
Sbjct: 440 LEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSM--IFAYGSHGQASEALRL 497

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMY 523
           +  +       +  TF  VL AC+    +++G  ++   +  +YD    +E  S +ID+ 
Sbjct: 498 FDEMQKLNVRADSVTFLAVLSACSHAGLVDEG-YMYFNEMVVQYDIKPGIEHYSCLIDLL 556

Query: 524 CKCGTIEDAKRAFRK 538
            + G + +A    ++
Sbjct: 557 GRAGRLHEAYEILQR 571



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 228/461 (49%), Gaps = 40/461 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ L+K G   D  + ++L++ + K   F  A +   +   RD+  +NA+IS   +  
Sbjct: 127 RIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDG 186

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  ALK FD+++  G  P++ TF+ +V +C    +L+  + VH   ++       +++S
Sbjct: 187 KAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLS 246

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G +  A+  F      + + + AM+ GY   G+     E+ + M   G + 
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKP 306

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
              +LT+++ A   S  ++ G+ IHG+ ++      +   ++ ++++ Y +CG    A  
Sbjct: 307 TLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDI--FIDVSLIDFYFKCGYVSSAET 364

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  I++ +VVSW+  I+      + ++A  ++ +++ +  + +  T  + LS+      
Sbjct: 365 IFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAA 424

Query: 292 LRAGKQIQAFC---YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
           L  G+++  +C   +K+   E+V    AL+ MY KCG V++AR +F  L  +D VSW SM
Sbjct: 425 LDKGRELH-YCIINHKLEANEIVM--GALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSM 481

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I  Y  +G  ++AL +F  M + ++  +  T  ++L A S           H+ ++  G+
Sbjct: 482 IFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACS-----------HAGLVDEGY 530

Query: 409 LLDDSMI------------SCLITTYGKCNALNESKRVLSE 437
           +  + M+            SCLI   G+   L+E+  +L  
Sbjct: 531 MYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQR 571


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 209/648 (32%), Positives = 345/648 (53%), Gaps = 17/648 (2%)

Query: 119 FIENYAKSGE--IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            +  Y++S    + +A   F +    D V++ A++     +G   ++  +   M + GL 
Sbjct: 31  LLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLA 90

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N F+L + L ++   +    G Q+    +K G  + V     +A++++Y +CG+  DA 
Sbjct: 91  SNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNV--FAASALLDVYAKCGRVRDAR 148

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++FD + E + VSW+  IA    + D   A  LF ++       +E T  +LL++V G  
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
                 Q+     K G    +++ NA I+ Y +CG + D+R IFD +   +D +SWN+M+
Sbjct: 209 CFLM-HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267

Query: 350 AGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVS-NSKSLKQAMQVHSHIIKSG 407
             Y+ NG  ++A+  F  M++ S + P+ Y+  SI+ + S +     Q   +H  +IKS 
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327

Query: 408 FLLDDSMISCLITTYGKCNA---LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
                 + + LI  Y + N    + ++ +  + +  K+ V  N++ +        A+AL+
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALK 387

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
            +R +       +   FS  L++ + +  L+ GK IH L + + +  + FV S++I MY 
Sbjct: 388 FFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYS 447

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           K G I+DA+++F +  + S   WNAM+ GYAQHG    V  LFN+M +     D IT++ 
Sbjct: 448 KSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVG 507

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           ++TSC HAGLV E    L+ M   +G+  ++EHYAC VDL GR G L+ AK  ID MP  
Sbjct: 508 LITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFE 567

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           PDA +W +LL AC I+GN++L     S L   +P   STYVLLS++Y+  GMW+D   ++
Sbjct: 568 PDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQ 627

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + MK++ L K PG+SWI V    H F A D SH +  EIY+ L  L +
Sbjct: 628 RVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVLLQ 675



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 259/523 (49%), Gaps = 30/523 (5%)

Query: 34  AFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
           A R +FD    RD +++NAL++  A       A +L   +  QGL  + F   S +++  
Sbjct: 45  AARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA 104

Query: 93  SLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
             +   I   +  + LK G ++ V+  S  ++ YAK G +  A   F    + + V++ A
Sbjct: 105 VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNA 164

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS----LTAVLGASFDVKEGEQIHGFGVKV 205
           ++ GY  +G+   + E+F+EM   GL  +E +    LTAV G S  +    Q+HG  VK 
Sbjct: 165 LIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM--HQLHGKIVKY 222

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAAAC-DGV--EAF 261
           G   G+   + NA +  Y +CG   D+ ++FD I +  D++SW+  + A   +G+  EA 
Sbjct: 223 GSALGLT--VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAM 280

Query: 262 GLF-KDLRFNDFQINEYTMINLLSSVGGE-RILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
             F + ++ +    + Y+  +++SS          G+ I     K     V  + NALI+
Sbjct: 281 KFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIA 340

Query: 320 MYGKCGQ---VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           MY +  +   + DA   F+ L+ KD+VSWNSM+ GYS++G    AL  F  M   ++  +
Sbjct: 341 MYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTD 400

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            Y  ++ L + S    L+   Q+H  +I SGF  +D + S LI  Y K   ++++++   
Sbjct: 401 EYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFE 460

Query: 437 EIDKKNAVHINALASVLVYASCHAEALE---LYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           E DK ++V  NA+  +  YA  H +A     L+  +      ++  TF  ++ +C+    
Sbjct: 461 EADKSSSVPWNAM--IFGYAQ-HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGL 517

Query: 494 LEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
           +++G  I    ++ +Y   + +E  +  +D+Y + G ++ AK+
Sbjct: 518 VDEGSEI-LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKK 559



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 218/458 (47%), Gaps = 27/458 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ SL +K+G   +   ++ L+  + K    R A +       R+ +++NALI+G     
Sbjct: 114 QLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA-----CGSLQENEIVHGVCLKLGFSSRVYL 115
               AL+LF  +  +GL PD  TF+SL+ A     C  + +   +HG  +K G +  + +
Sbjct: 174 DMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQ---LHGKIVKYGSALGLTV 230

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSL 173
           ++  I  Y++ G +  +   F    D+ D +++ AM+  Y  NG  D++ + FV  M+  
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290

Query: 174 GLELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCG 227
           G+  + +S T+++ +      D  +G  IHG  +K     ++ VC    NA++ +Y R  
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVC----NALIAMYTRYN 346

Query: 228 QKL---DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN 281
           +     DA K F+ +   D VSW+  +          +A   F+ +   + + +EY    
Sbjct: 347 ENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSA 406

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
            L S     +L+ GKQI       GF     + ++LI MY K G ++DAR  F+      
Sbjct: 407 ALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSS 466

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-H 400
           SV WN+MI GY+++G       +F  ML+     +  T   ++ + S++  + +  ++ +
Sbjct: 467 SVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILN 526

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +   K G  L     +C +  YG+   L+++K+++  +
Sbjct: 527 TMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSM 564


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 234/768 (30%), Positives = 393/768 (51%), Gaps = 24/768 (3%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPA 65
           I+    +D +   T +  F     F    R +FD   +RD++ +NA++ G   +     A
Sbjct: 79  IQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEA 138

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVYLVSGFIE 121
           + L   +  + LRP++ T  +L+ AC    E  +   VHG CL+ G F S  ++ +  I 
Sbjct: 139 MLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIG 198

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y +  ++    + F   +  + V++ AM+ GY   G++ K+ E+FV+M    ++ +  +
Sbjct: 199 FYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVT 257

Query: 182 LTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           +   + A  ++   K G+QIH   +K  F+  +  ++ NA++N+Y   G    + ++F+ 
Sbjct: 258 MLVAVQACAELGSLKLGKQIHQLAIKFEFVEDL--YILNALLNMYSNNGSLESSHQLFES 315

Query: 239 ITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI---L 292
           +   D   W+  I+A A  G   EA  LF  ++    + +E T++ +LS    E +   L
Sbjct: 316 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC--EELASGL 373

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK + A   K G     S+GNAL+SMY +   V   + IFD +   D +SWN+MI   
Sbjct: 374 LKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILAL 433

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           + N    QA ++F  M E  + PN YT+ SIL A  +   L     +H +++K    ++ 
Sbjct: 434 ARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQ 493

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL-ASVLVYASCHAEALELYRTIWG 471
            + + L   Y  C     ++ +      ++ +  NA+ AS +     H   L  +R I  
Sbjct: 494 PLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-- 551

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ--DIFVESAVIDMYCKCGTI 529
           S  E N  T   VL +   +  L QG+++H    +  +    D+ + +A I MY +CG++
Sbjct: 552 SEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSL 611

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + A+  F+ + + ++  WNAM+ GY  +G   +    F++M + G +P+ +T+++VL++C
Sbjct: 612 QSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSAC 671

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+G +         M     + P+L HY+CIVDLL R G ++ A+  ID MPI PDA +
Sbjct: 672 SHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASV 731

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W++LLS+C  Y +         KL +L+P N   YVLLSN+YA+AG+W +V ++R  +KE
Sbjct: 732 WRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKE 791

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVAT 757
           K L K PG SWI V    H F AGD SH QS +IY +L  L   M  T
Sbjct: 792 KGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRET 839



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/663 (24%), Positives = 313/663 (47%), Gaps = 23/663 (3%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENE 98
           Q +D   +N++I   A        L  + ++   G+ P+  T   ++KAC +   ++  +
Sbjct: 14  QIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 73

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
            +H           V + +  ++ Y K G +  A   F    D D V + AMV GYV  G
Sbjct: 74  SIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWG 133

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNH 214
            ++++  +  EM    L  N  ++ A+L    GAS +++ G  +HG+ ++ G       H
Sbjct: 134 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGAS-ELRLGRGVHGYCLRNGMFDS-NPH 191

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND 271
           +  A++  Y+R   ++  + +FD +   ++VSW+  I+      D  +A  LF  +  ++
Sbjct: 192 VATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + +  TM+  + +      L+ GKQI     K  F+E + I NAL++MY   G +  + 
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ +  +D+  WNSMI+ Y+  G   +A+D+F  M    +  +  T+  +L       
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370

Query: 392 S-LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           S L +   +H+H+IKSG  +D S+ + L++ Y + N +   +++   +   + +  N + 
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 430

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
             L   +  A+A EL+  +  S  + N  T   +L AC  +T L+ G++IH   +K   +
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 490

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            +  + +A+ DMY  CG    A+  F       L  WNAM+  Y ++   H+   LF++M
Sbjct: 491 INQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM 550

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREART---YLSCMSDLHGLIPQLEHYACIVDLLGR 627
                +P+ +T + VL+S  H   + + ++   Y++      GL   L +    + +  R
Sbjct: 551 IS-EAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLAN--AFITMYAR 607

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYV 685
            G L+ A+     +P   +   W ++++   + G     +LA S++LE   +P+  +   
Sbjct: 608 CGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVS 666

Query: 686 LLS 688
           +LS
Sbjct: 667 VLS 669



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 25/305 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  ++K+   ++  L T L   +    D   A        +RD+I++NA+I+   +  Q
Sbjct: 480 IHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQ 539

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFS--SRVYLV 116
           +  AL LF R+  +   P++ T  +++ +     +L + + +H    + GFS    + L 
Sbjct: 540 AHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLA 598

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           + FI  YA+ G + SAE  F+     + +++ AM+ GY  NG    +   F +M   G  
Sbjct: 599 NAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFR 658

Query: 177 LNEFSLTAVLGA---SFDVKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            N  +  +VL A   S  ++ G Q     +  F V    +   C      I++L  R G 
Sbjct: 659 PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSC------IVDLLARGGC 712

Query: 229 KLDAVKMFDEIT-EPDVVSWSERIA---AACDGVEAFGLFKDL-RFNDFQINEYTMINLL 283
             +A +  D +  EPD   W   ++   A  D  +A  +F+ L +        Y +++ +
Sbjct: 713 IDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNV 772

Query: 284 SSVGG 288
            +  G
Sbjct: 773 YATAG 777


>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
 gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 220/732 (30%), Positives = 368/732 (50%), Gaps = 14/732 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK G   D  +S  LI  + K A  R  F        R+++++  ++ G  +  
Sbjct: 74  QIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCE 133

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLV 116
           +    L++F  +   G  P+ F   S++KACG+  E  +    VH   LK+G     ++ 
Sbjct: 134 EVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVS 193

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              +  YAK G+I +AE  F    ++D   + AM+ GY   G   ++      MR  G+ 
Sbjct: 194 CSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIF 253

Query: 177 LNEFSLTAVL-GASF--DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +++++   V+ G S   D   G QIHG  ++      +   + NA+M++Y + G     +
Sbjct: 254 MDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSEL--ELSAPVMNALMDMYFKNGGMKSGL 311

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F ++ + DVV+W+    +     D  +   LF        + N  T   L    G   
Sbjct: 312 VVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLL 371

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G Q        G  +  +I +ALI+M+ +CG++  A  +F   + ++ + WN +I+
Sbjct: 372 NLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELIS 431

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY  N    +AL  F  +L+  +  N YT +++LE  S S++     Q+H    KSGF  
Sbjct: 432 GYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFAS 491

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
              + S LI  Y KC  L++S +V + +D+ +      + S  V+     EA+     + 
Sbjct: 492 HGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLI 551

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +  + +      +L +CA+     Q K++H L +K  ++  +FV SAV+D Y KCG I+
Sbjct: 552 EAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQ 611

Query: 531 DAKRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            AK AF + C+ S +  +NAM++ YA HG   E  + ++KM    ++P + T+++V+ +C
Sbjct: 612 SAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAAC 671

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H G V +       M DL+G+ P  + Y C+VD+  R G LE AK  I+ +P P    I
Sbjct: 672 GHIGHVEKGCRLFKSM-DLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAI 730

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            +SLLS C +YGN +LG  A  KLL+L P N++ + LL  +Y+  G W D  K+R+EM E
Sbjct: 731 LRSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELGNWEDAAKMRREMAE 790

Query: 710 KFLCKEPGYSWI 721
           + L K+PG+SWI
Sbjct: 791 RGLRKDPGHSWI 802



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 227/496 (45%), Gaps = 29/496 (5%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G QIHG+ +K+GF S V   ++N ++  Y +         +FD + E +VVSW+  +  A
Sbjct: 72  GTQIHGYIIKLGFSSDV--FVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGA 129

Query: 255 --CDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA-GKQIQAFCYKVGFMEV 310
             C+ VE    +F ++  + F  NE+ + +++ + G     R  G  +  F  K+G    
Sbjct: 130 IQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERN 189

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             +  +++S Y K G +  A  +F+ L   D   WN+MI GY++ G+  +A+     M  
Sbjct: 190 PFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRR 249

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             +  + YT  ++++  S         Q+H  II+S   L   +++ L+  Y K   +  
Sbjct: 250 KGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKS 309

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
              V  ++  ++ V  N +           +   L+ +   +    N  TFSI+ + C  
Sbjct: 310 GLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGK 369

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + +L+ G    CLAL      +  + SA+I+M+ +CG +E A   F+    +++  WN +
Sbjct: 370 LLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNEL 429

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS-DLH 609
           + GY  + C  E    F  + + GV+ +E T+  VL +C        +R+    M+  +H
Sbjct: 430 ISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETC--------SRSENQLMNRQIH 481

Query: 610 GLIPQ----LEHYACIVDLLG--RVGLLEGAKMTIDQMPIPPDAHIWQSLLSA------- 656
           G+  +       Y C   + G  + GLL+ + + +  M   PD   W +++SA       
Sbjct: 482 GVAFKSGFASHGYVCSSLIKGYIKCGLLDDS-LKVFNMLDRPDMAAWGTMISAFVHQGWD 540

Query: 657 CTIYGNIDLGLLAGSK 672
           C    +++L + AG K
Sbjct: 541 CEAIRSLNLLIEAGEK 556



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 137/325 (42%), Gaps = 16/325 (4%)

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
           F +  +   ++  L    NSKS     Q+H +IIK GF  D  + + LI  Y K   L  
Sbjct: 47  FFIGKDSVALSKALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRY 106

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
              V   + ++N V    +    +        LE++  +       N      V+KAC  
Sbjct: 107 GFNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGN 166

Query: 491 MTDLEQ-GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
             +    G  +HC ALK   +++ FV  +V+  Y K G I  A+R F  +    +  WNA
Sbjct: 167 SVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNA 226

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ GYAQ G   E     + M + G+  D+ T++ V+  C   G     R        +H
Sbjct: 227 MIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGR-------QIH 279

Query: 610 GLI--PQLEHYA----CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           GLI   +LE  A     ++D+  + G ++   +   +M    D   W ++  + + + + 
Sbjct: 280 GLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMH-DRDVVTWNTVFGSFSQHEDP 338

Query: 664 -DLGLLAGSKLLELQPDNESTYVLL 687
            D+  L  S LL     N  T+ +L
Sbjct: 339 KDIASLFHSFLLTSMRPNHITFSIL 363


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 308/585 (52%), Gaps = 43/585 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-----DGVEAFGLFKDLRFND 271
           NA+++ Y R G+  +A  +F+ I +PD  S++  +AA          +A      +  +D
Sbjct: 87  NALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADD 146

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F +N Y+  + LS+   E+ LR G+Q+     +    + V IG AL+ MY KC +  DAR
Sbjct: 147 FVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDAR 206

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD +  ++ VSWNS+I  Y +NG   +AL +F  M+     P+  T++S++ A +   
Sbjct: 207 RVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLA 266

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNA----------------------- 427
           + ++  QVH+H++K   L DD +++  L+  Y KC                         
Sbjct: 267 AEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSIL 326

Query: 428 --------LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
                   + +++ V S++ +KN +  N L +         EA+ L+  +          
Sbjct: 327 AGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHY 386

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKA--RYD----QDIFVESAVIDMYCKCGTIEDAK 533
           T+  VL AC  +  L+ G+  H   LK   R+D     D+FV ++++DMY K G+I+D  
Sbjct: 387 TYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGA 446

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           + F ++       WNAM++GYAQ+G   +  +LF +M      PD +T + VL++C H+G
Sbjct: 447 KVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSG 506

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV E R +   M++ HG+ P  +HY C+VDLLGR G L+ A+  I  MP  PD+ +W SL
Sbjct: 507 LVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASL 566

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L AC ++ N++LG     +L EL P+N   YVLLSN+YA  G W DV ++R+ MK++ + 
Sbjct: 567 LGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVS 626

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           K+PG SWI +G   + F A D+ H    EI+  L  +   M  T+
Sbjct: 627 KQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEMCRTS 671



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 227/517 (43%), Gaps = 61/517 (11%)

Query: 36  RFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP----DAFTFSSLVKA- 90
           R L   + ++++ +    S LA   +S P+L          L+     + F  ++LV   
Sbjct: 3   RHLHHHRGQELVAHLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTY 62

Query: 91  --CGSLQE-NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
              G L+E   +  G+ L+  FS      +  +  YA+ G    A   F    D D  +Y
Sbjct: 63  ARLGRLREARRVFDGIPLRNTFS-----YNALLSAYARLGRPDEARALFEAIPDPDQCSY 117

Query: 148 TAMVCGYVWNGEFDKSKEV--FVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFG 202
            A+V     +G       +     M +    LN +S  + L    A  D++ GEQ+HG  
Sbjct: 118 NAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLV 177

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--E 259
            +      V  H+  A++++Y +C + +DA ++FD + E +VVSW+  I     +G   E
Sbjct: 178 ARSPHADDV--HIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALI 318
           A  LF ++    F  +E T+ +++S+  G    R G+Q+ A   K   + + + + NAL+
Sbjct: 236 ALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALV 295

Query: 319 SMYGKCGQVNDARSIFD-------------------------------YLIFKDSVSWNS 347
            MY KCG+  +AR IFD                                ++ K+ ++WN 
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNV 355

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +IA Y++NG   +A+ +F  +   S+ P  YT  ++L A  N   L+   Q H H++K G
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEG 415

Query: 408 FLLD-----DSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           F  D     D  + + L+  Y K  ++++  +V   +  ++ V  NA+           +
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           AL L+  +  S    +  T   VL AC     +++G+
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGR 512



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 33/295 (11%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           + + + + ++ SL  A   H  ++KS    +  +++ L++TY +   L E++RV   I  
Sbjct: 21  SPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPL 80

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCR-------------------------- 474
           +N    NAL S         EA  L+  I    +                          
Sbjct: 81  RNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLA 140

Query: 475 -------EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
                   +N  +F+  L ACAA  DL  G+ +H L  ++ +  D+ + +A++DMY KC 
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCE 200

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
              DA+R F  +   ++  WN+++  Y Q+G   E   LF +M   G  PDE+T  +V++
Sbjct: 201 RPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMS 260

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +C      RE R   + M     L   +     +VD+  + G    A+   D MP
Sbjct: 261 ACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 175/403 (43%), Gaps = 57/403 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++ L+ ++ H  D  + T L+  + K     D RR F  +     R+++++N+LI+   
Sbjct: 172 QVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM---PERNVVSWNSLITCYE 228

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLG-FSSRV 113
           +    G AL LF  +   G  PD  T SS++ AC  L   +E   VH   +K       +
Sbjct: 229 QNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDM 288

Query: 114 YLVSGFIENYAKSGE-------------------------------IVSAEMCFRDCLDL 142
            L +  ++ YAK G                                +  A++ F   ++ 
Sbjct: 289 VLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEK 348

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIH 199
           + +A+  ++  Y  NGE +++  +FV+++   +    ++   VL A  ++   + G+Q H
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAH 408

Query: 200 ------GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI-- 251
                 GF    G  S V   + N+++++Y++ G   D  K+F+ +   D VSW+  I  
Sbjct: 409 VHVLKEGFRFDFGPESDV--FVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVG 466

Query: 252 -AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFME 309
            A      +A  LF+ +  ++   +  TMI +LS+ G   ++  G++   F  +  G   
Sbjct: 467 YAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITP 526

Query: 310 VVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWNSMIAG 351
                  ++ + G+ G + +A  +  D     DSV W S++  
Sbjct: 527 SRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 569



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 48/214 (22%)

Query: 485 LKACAAMTDLEQ-------GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
           L+A + + DL +        +A H   LK+    + F+ + ++  Y + G + +A+R F 
Sbjct: 17  LRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFD 76

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC-----HA 592
            I   +   +NA++  YA+ G   E   LF  +      PD+ +Y AV+ +       HA
Sbjct: 77  GIPLRNTFSYNALLSAYARLGRPDEARALFEAIP----DPDQCSYNAVVAALARHGRGHA 132

Query: 593 G-------------LVREARTYLSCMS------------DLHGLIPQLEHY------ACI 621
           G              V  A ++ S +S             +HGL+ +  H         +
Sbjct: 133 GDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTAL 192

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           VD+  +      A+   D MP   +   W SL++
Sbjct: 193 VDMYAKCERPVDARRVFDAMP-ERNVVSWNSLIT 225


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 186/607 (30%), Positives = 317/607 (52%), Gaps = 69/607 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQ 273
           N++++++ + G+  DA  +F E+ E D VSW+  +     A    EA     D+  + F 
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             ++T+ N+LSS    +    G+++ +F  K+G    V + N++++MYGKCG    A ++
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 334 FDYLIFKDS-------------------------------VSWNSMIAGYSENGFFNQAL 362
           F+ +  +                                 VSWN+MIAGY++NG   +AL
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 363 DMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
            +F  ML E S+ P+ +T+ S+L A +N  +++   QVH++I+++    +  + + LI+T
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 422 YGKCNALNESKRVLSE---------------------------------IDKKNAVHINA 448
           Y K  ++  ++R++ +                                 ++ ++ V   A
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +         + EA++L+R++     E N  T + VL  CA++  L+ GK IHC A+++ 
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL 461

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            ++   V +A+I MY + G+   A+R F ++C R     W +M++  AQHG   E   LF
Sbjct: 462 LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLF 521

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + GV+PD ITY+ VL++C HAG V E + Y   + + H + P++ HYAC+VDLL R
Sbjct: 522 EEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLAR 581

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            GL   A+  I +MP+ PDA  W SLLSAC ++ N +L  LA  KLL + P+N   Y  +
Sbjct: 582 AGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+Y++ G W+D  ++ K  KEK + KE G+SW H+    H F A D  H Q   +Y   
Sbjct: 642 ANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMA 701

Query: 748 IKLYEHM 754
            +++E +
Sbjct: 702 ARMWEEI 708



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/549 (22%), Positives = 230/549 (41%), Gaps = 107/549 (19%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  +  +AKSG +  A   F +  + D V++T MV G    G F ++ +  ++M +
Sbjct: 98  VFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTA 157

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ- 228
            G    +F+LT VL +    +    G ++H F VK+G   G C  + N+++N+Y +CG  
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGL--GSCVPVANSVLNMYGKCGDA 215

Query: 229 -----------------------------KLD-AVKMFDEITEPDVVSWSERIAAACDG- 257
                                        ++D A  +F+ +    +VSW+  IA      
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275

Query: 258 --VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
              +A  LF + L  +    +E+T+ ++LS+      +R GKQ+ A+  +        + 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 315 NALISMYGKCGQVNDARSIFD---------------------------------YLIFKD 341
           NALIS Y K G V +AR I D                                  +  +D
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V+W +MI GY +NG  ++A+D+F  M+     PN YT+A++L   ++   L    Q+H 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHA 460
             I+S      S+ + +IT Y +  +   ++R+  ++  +K  +   ++   L       
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EA+ L+  +  +  E +  T+  VL AC+    + +GK         RY   I  E  + 
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGK---------RYYDQIKNEHQIA 566

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
                                  ++ +  M+   A+ G + E      +M    V+PD I
Sbjct: 567 ---------------------PEMSHYACMVDLLARAGLFSEAQEFIRRMP---VEPDAI 602

Query: 581 TYLAVLTSC 589
            + ++L++C
Sbjct: 603 AWGSLLSAC 611



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 239/596 (40%), Gaps = 117/596 (19%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           +L+S F K      A     +   RD +++  ++ GL R  + G A+K    +   G  P
Sbjct: 103 SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTP 162

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
             FT ++++ +C   Q   +   VH   +KLG  S V + +  +  Y K G+  +A   F
Sbjct: 163 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVF 222

Query: 137 RDC--------------------LDLDN-----------VAYTAMVCGYVWNGEFDKSKE 165
                                  +DL             V++ AM+ GY  NG   K+ +
Sbjct: 223 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALK 282

Query: 166 VFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVK--VGFLSGVCNHLNN-- 217
           +F  M     +  +EF++T+VL A     +V+ G+Q+H + ++  + + S V N L +  
Sbjct: 283 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 342

Query: 218 ---------------------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
                                      A++  YV+ G    A +MF  +   DVV+W+  
Sbjct: 343 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 402

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF+ +     + N YT+  +LS       L  GKQI     +   
Sbjct: 403 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 462

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFC 366
               S+ NA+I+MY + G    AR +FD + + K++++W SMI   +++G   +A+ +F 
Sbjct: 463 ERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 522

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            ML   + P+  T   +L A S+                +GF                  
Sbjct: 523 EMLRAGVEPDRITYVGVLSACSH----------------AGF------------------ 548

Query: 427 ALNESKRVLSEIDKKNAV-----HINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
            +NE KR   +I  ++ +     H   +  +L  A   +EA E  R +     E +   +
Sbjct: 549 -VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAW 604

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             +L AC    + E  + +    L +    +    SA+ ++Y  CG   DA R ++
Sbjct: 605 GSLLSACRVHKNAELAE-LAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWK 659



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L+ I  T L+  + K  D   A        NRD++ + A+I G  +  ++  A+ LF  +
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422

Query: 73  RYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              G  P+++T ++++  C S   L   + +H   ++        + +  I  YA+SG  
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSF 482

Query: 130 VSAEMCFRD-CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
             A   F   C   + + +T+M+     +G+ +++  +F EM   G+E +  +   VL A
Sbjct: 483 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 542

Query: 189 SFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDV 244
                 V EG++ +        ++   +H    +++L  R G   +A +    +  EPD 
Sbjct: 543 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHY-ACMVDLLARAGLFSEAQEFIRRMPVEPDA 601

Query: 245 VSWSERIAA 253
           ++W   ++A
Sbjct: 602 IAWGSLLSA 610



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 8/159 (5%)

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           +++F  ++++ M+ K G + DA+  F ++       W  M++G  + G + E       M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 571 SKFGVKPDEITYLAVLTSCC--HAGLV-REARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           +  G  P + T   VL+SC    AG V R+  +++  +  L   +P       ++++ G+
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVAN---SVLNMYGK 211

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            G  E A    ++MP+      W +++S  T  G +DL 
Sbjct: 212 CGDAETASTVFERMPV-RSVSSWNAMVSLNTHLGRMDLA 249


>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
 gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
          Length = 688

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 186/574 (32%), Positives = 304/574 (52%), Gaps = 43/574 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-----DGVEAFGLFKDLRFND 271
           NA+++ Y R G+  +A  +F+ I +PD  S++  +AA          +A      +  +D
Sbjct: 87  NALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADD 146

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F +N Y+  + LS+   E+  R G+Q+     +    + V I +AL+ MY KC +  DAR
Sbjct: 147 FVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDAR 206

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD +  ++ VSWNS+I  Y +NG   +AL +F  M+     P+  T++S++ A +   
Sbjct: 207 RVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLA 266

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMI--------------------------------SCLI 419
           + ++  QVH+H++K   L DD ++                                + ++
Sbjct: 267 ADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSIL 326

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
           T Y K   + +++ V S++ +KN +  N L +         EA+ L+  +          
Sbjct: 327 TGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHY 386

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKA--RYD----QDIFVESAVIDMYCKCGTIEDAK 533
           T+  VL AC  + DL+ G+  H   LK   R+D     D+FV ++++DMY K G+I+D  
Sbjct: 387 TYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGA 446

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           + F ++       WNAM++GYAQ+G   +  +LF +M      PD +T + VL++C H+G
Sbjct: 447 KVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSG 506

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV E R Y   M++ HG+ P  +HY C+VDLLGR G L+ A+  I+ MP+ PD+ +W SL
Sbjct: 507 LVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASL 566

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L AC ++ N++LG     +L EL P N   YVLLSN+YA  G W +V ++R+ MK++ + 
Sbjct: 567 LGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVS 626

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           K+PG SWI +G   + F A D  H    EI+  L
Sbjct: 627 KQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTL 660



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 225/517 (43%), Gaps = 61/517 (11%)

Query: 36  RFLFDTQNRDIITYNALISGLARFCQSGPALK----LFDRLRYQGLRPDAFTFSSLVKA- 90
           R L     ++++ +    S LA   +S P L        R+    +  + F  ++LV   
Sbjct: 3   RHLHHHHGQELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTY 62

Query: 91  --CGSLQE-NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
              G L++   +   + L+  FS      +  +  YA+ G    A   F    D D  +Y
Sbjct: 63  ARLGRLRDARRVFDEIPLRNTFS-----YNALLSAYARLGRPDEARALFEAIPDPDQCSY 117

Query: 148 TAMVCGYVWNGEFDKSKEV--FVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFG 202
            A+V     +G    +  +     M +    LN +S  + L    A  D + GEQ+HG  
Sbjct: 118 NAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLV 177

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--E 259
            +      V  H+ +A++++Y +C +  DA ++FD + E +VVSW+  I     +G   E
Sbjct: 178 ARSPHADDV--HIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALI 318
           A  LF ++    F  +E T+ +++S+  G    R G+Q+ A   K   + + + + NAL+
Sbjct: 236 ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295

Query: 319 SMYGKCGQVNDARSIFD-------------------------------YLIFKDSVSWNS 347
            MY KCG+  +AR IFD                                ++ K+ ++WN 
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNV 355

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +IA Y++NG   +A+ +F  +   S+ P  YT  ++L A  N   L+   Q H H++K G
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415

Query: 408 FLLD-----DSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           F  D     D  + + L+  Y K  ++++  +V   +  ++ V  NA+           +
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 475

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           AL L+  +  S    +  T   VL AC     +++G+
Sbjct: 476 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGR 512



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 129/297 (43%), Gaps = 36/297 (12%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +A +L +  N   L  A   H+ I+KS    +  +++ L++TY +   L +++RV  EI
Sbjct: 22  PLADLLRSAPN---LSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEI 78

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTI-------------------WGSCRE---- 475
             +N    NAL S         EA  L+  I                    G   +    
Sbjct: 79  PLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRF 138

Query: 476 ----------VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
                     +N  +F+  L ACAA  D   G+ +H L  ++ +  D+ + SA++DMY K
Sbjct: 139 LAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAK 198

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           C   EDA+R F  +   ++  WN+++  Y Q+G   E   LF +M   G  PDE+T  +V
Sbjct: 199 CERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSV 258

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +++C      RE R   + M     L   +     +VD+  + G    A+   D MP
Sbjct: 259 MSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/400 (22%), Positives = 172/400 (43%), Gaps = 51/400 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+ ++ H  D  + + L+  + K      A R       R+++++N+LI+   +  
Sbjct: 172 QVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNG 231

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVH---------------- 101
             G AL LF  +   G  PD  T SS++ AC  L   +E   VH                
Sbjct: 232 PVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLN 291

Query: 102 ---------------GVCLKLGFSSR-VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
                            C+     SR +   +  +  YAKS  +  A++ F   ++ + +
Sbjct: 292 NALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVI 351

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIH--- 199
           A+  ++  Y  NGE +++  +FV+++   +    ++   VL A     D++ G+Q H   
Sbjct: 352 AWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHV 411

Query: 200 ---GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AA 253
              GF    G  S V   + N+++++Y++ G   D  K+F+ +   D VSW+  I   A 
Sbjct: 412 LKEGFRFDFGPESDV--FVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQ 469

Query: 254 ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVS 312
                +A  LF+ +  ++   +  TMI +LS+ G   ++  G++   +     G      
Sbjct: 470 NGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRD 529

Query: 313 IGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIAG 351
               ++ + G+ G + +A   I D  +  DSV W S++  
Sbjct: 530 HYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGA 569



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 53/268 (19%)

Query: 477 NGSTFSIVLKACAAMTDLEQ-------GKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           +G      L+A + + DL +        +A H   LK+    + F+ + ++  Y + G +
Sbjct: 9   HGQELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRL 68

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA+R F +I   +   +NA++  YA+ G   E   LF  +      PD+ +Y AV+ + 
Sbjct: 69  RDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIP----DPDQCSYNAVVAAL 124

Query: 590 CHAG------------------LVREARTYLSCMS------------DLHGLIPQLEH-- 617
              G                   V  A ++ S +S             +HGL+ +  H  
Sbjct: 125 ARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHAD 184

Query: 618 ----YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
                + +VD+  +    E A+   D MP   +   W SL++     G +   L+   ++
Sbjct: 185 DVHIRSALVDMYAKCERPEDARRVFDAMP-ERNVVSWNSLITCYEQNGPVGEALMLFVEM 243

Query: 674 LE--LQPDNESTYVLLSNLYASAGMWND 699
           +     PD      L S + A AG+  D
Sbjct: 244 MAAGFSPDE---VTLSSVMSACAGLAAD 268


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 240/750 (32%), Positives = 391/750 (52%), Gaps = 26/750 (3%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDT--QN-RDIITYNALISGL 56
           Q+++L I NG     + L  +LI ++ KF     +F  LF+   QN R    +N LI   
Sbjct: 75  QVHALGILNGFLPRSVSLCASLILNYAKF-QHPGSFCSLFNQTFQNCRTAFLWNTLIRAH 133

Query: 57  A-RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
           +  +  +    + ++R+  +G++ D  TF  ++K C     + +   VHGV  KLGF + 
Sbjct: 134 SIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTD 193

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-- 170
           VY+ +  +  Y   G +  A   F +  + D V++  ++     NG++ +++  +  M  
Sbjct: 194 VYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMIL 253

Query: 171 RSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           RS+ ++ N  S+ ++L  S  +++ E   +IH + VKVG  S V     NA+++ Y +CG
Sbjct: 254 RSV-IKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTT--CNALVDAYGKCG 310

Query: 228 QKLDAVKMFDEITEPDVVSWSERI-AAACDGV--EAFGLFKDLRFNDFQINEYTMINLLS 284
                 ++F+E  E + VSW+  I   AC G   +A   F+ +     Q N  T+ ++L 
Sbjct: 311 SVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILP 370

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
            +      +AGK+I  F  ++G    + I N+LI MY K G   +A +IF  L  ++ VS
Sbjct: 371 VLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVS 430

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN+MIA Y+ N    +A+     M E    PN  T  ++L A +    L    ++H+  +
Sbjct: 431 WNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGV 490

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH--AEA 462
           + G   D  + + LI  Y KC  L+ ++ V +   +K+ V  N L  ++ Y+      ++
Sbjct: 491 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNIL--IIGYSETDDCLQS 547

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L L+  +    ++ +  +F  V+ ACA +  L+QGK +H +AL+      +FV ++++D 
Sbjct: 548 LNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDF 607

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG I+ A R F +I    +A WN M++GY   G      ++F  M    V+ D ++Y
Sbjct: 608 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 667

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +AVL++C H GLV     Y S M     L P   HY C+VDLLGR G +E A   I Q+P
Sbjct: 668 IAVLSACSHGGLVERGWQYFSEMLA-QRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP 726

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           I PDA+IW +LL AC IYGN++LG  A   L EL+P +   Y+LLSN+YA  G W++  K
Sbjct: 727 IAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANK 786

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           +R+ MK +   K PG SW+ +    H F A
Sbjct: 787 IRELMKSRGAKKNPGCSWVQIYDQVHAFVA 816



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 11/318 (3%)

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFD 335
           Y  INLL+     + L   KQ+ A     GF+   VS+  +LI  Y K        S+F+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 336 --YLIFKDSVSWNSMIAGYS--ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
             +   + +  WN++I  +S   NG F+   + +  M+   +  + +T   +L+  S+S 
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            + + M+VH  + K GF  D  + + L+  YG C  LN+++R+  E+ +++ V  N +  
Sbjct: 174 DICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIG 233

Query: 452 VLVYASCHAEALELYRTIWGSCREV---NGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +L     + EA   Y   W   R V   N  +   +L   AA+ D E  + IHC ++K  
Sbjct: 234 LLSVNGDYTEARNYY--FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVG 291

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
            D  +   +A++D Y KCG+++   + F +    +   WN+++ G A  G   +  N F 
Sbjct: 292 LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFR 351

Query: 569 KMSKFGVKPDEITYLAVL 586
            M   G +P+ +T  ++L
Sbjct: 352 MMIDAGAQPNSVTISSIL 369



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 134/295 (45%), Gaps = 19/295 (6%)

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGK-------CNALN 429
           Y   ++L   S  +SL Q  QVH+  I +GFL    S+ + LI  Y K       C+  N
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYA-SCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++ +     + + A   N L      A +   +  E Y  +     +++  TF  VLK C
Sbjct: 115 QTFQ-----NCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLC 169

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           +   D+ +G  +H +  K  +D D++V + ++ +Y  CG + DA+R F ++    +  WN
Sbjct: 170 SDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWN 229

Query: 549 AMMMGYAQHGCYHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREART-YLSCMS 606
            ++   + +G Y E  N +  M  +  +KP+ ++ +++L     A L  E  T  + C S
Sbjct: 230 TIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP--ISAALEDEEMTRRIHCYS 287

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              GL  Q+     +VD  G+ G ++      ++  +  +   W S+++     G
Sbjct: 288 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET-VEKNEVSWNSIINGLACKG 341


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 213/666 (31%), Positives = 353/666 (53%), Gaps = 18/666 (2%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGE--IVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           H   LK GF++     +  +  Y++S    + +A   F +    D V++ A++  +  +G
Sbjct: 14  HASLLKSGFAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
              ++  +   M + GL  N F+L + L ++   +    G Q+    +K G  + V    
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNV--FA 130

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDF 272
            +A++++Y +CG+  DA ++FD + E + VSW+  IA    + D   A  LF ++     
Sbjct: 131 ASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGL 190

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             +E T  +LL++V G        Q+     K G    +++ NA I+ Y +CG + D+R 
Sbjct: 191 VPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRR 249

Query: 333 IFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVS-N 389
           IFD +   +D +SWN+M+  Y+ NG  ++A+  F  M++ S + P+ Y+  SI+ + S +
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA---LNESKRVLSEIDKKNAVHI 446
                Q   +H  +IKS       + + LI  Y + N    + ++ +  + +  K+ V  
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N++ +        A+AL+ +R +       +   FS  L++ + +  L+ GK IH L + 
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIH 429

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
           + +  + FV S++I MY K G I+DA+++F +  + S   WNAM+ GYAQHG    V  L
Sbjct: 430 SGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDIL 489

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           FN+M +     D IT++ ++TSC HAGLV E    L+ M   +G+  ++EHYAC VDL G
Sbjct: 490 FNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYG 549

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R G L+ AK  ID MP  PDA +W +LL AC I+GN++L     S L   +P   STYVL
Sbjct: 550 RAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVL 609

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           LS++Y+  GMW+D   +++ MK++ L K PG+S I V    H F A D SH +  EIY+ 
Sbjct: 610 LSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEM 669

Query: 747 LIKLYE 752
           L  L +
Sbjct: 670 LRVLLQ 675



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 270/554 (48%), Gaps = 30/554 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQ 61
           ++ L+K+G       +  L ++     D   A R +FD    RD +++NAL++  A    
Sbjct: 14  HASLLKSGFAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGA 73

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A +L   +  QGL  + F   S +++    +   I   +  + LK G ++ V+  S 
Sbjct: 74  HPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASA 133

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A   F    + + V++ A++ GY  +G+   + E+F+EM   GL  +
Sbjct: 134 LLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPD 193

Query: 179 EFS----LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           E +    LTAV G S  +    Q+HG  VK G   G+   + NA +  Y +CG   D+ +
Sbjct: 194 EATFASLLTAVEGPSCFLM--HQLHGKIVKYGSALGLT--VLNAAITAYSQCGSLKDSRR 249

Query: 235 MFDEITE-PDVVSWSERIAAAC-DGV--EAFGLF-KDLRFNDFQINEYTMINLLSSVGGE 289
           +FD I +  D++SW+  + A   +G+  EA   F + ++ +    + Y+  +++SS    
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309

Query: 290 -RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ---VNDARSIFDYLIFKDSVSW 345
                 G+ I     K     V  + NALI+MY +  +   + DA   F+ L+ KD+VSW
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NSM+ GYS++G    AL  F  M   ++  + Y  ++ L + S    L+   Q+H  +I 
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIH 429

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE- 464
           SGF  +D + S LI  Y K   ++++++   E DK ++V  NA+  +  YA  H +A   
Sbjct: 430 SGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAM--IFGYAQ-HGQAENV 486

Query: 465 --LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV--I 520
             L+  +      ++  TF  ++ +C+    +++G  I    ++ +Y   + +E     +
Sbjct: 487 DILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVPLRMEHYACGV 545

Query: 521 DMYCKCGTIEDAKR 534
           D+Y + G ++ AK+
Sbjct: 546 DLYGRAGQLDKAKK 559



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 218/458 (47%), Gaps = 27/458 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ SL +K+G   +   ++ L+  + K    R A +       R+ +++NALI+G     
Sbjct: 114 QLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA-----CGSLQENEIVHGVCLKLGFSSRVYL 115
               AL+LF  +  +GL PD  TF+SL+ A     C  + +   +HG  +K G +  + +
Sbjct: 174 DMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMHQ---LHGKIVKYGSALGLTV 230

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSL 173
           ++  I  Y++ G +  +   F    D+ D +++ AM+  Y  NG  D++ + FV  M+  
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290

Query: 174 GLELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCG 227
           G+  + +S T+++ +      D  +G  IHG  +K     ++ VC    NA++ +Y R  
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVC----NALIAMYTRYN 346

Query: 228 QKL---DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN 281
           +     DA K F+ +   D VSW+  +          +A   F+ +   + + +EY    
Sbjct: 347 ENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSA 406

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
            L S     +L+ GKQI       GF     + ++LI MY K G ++DAR  F+      
Sbjct: 407 ALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSS 466

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-H 400
           SV WN+MI GY+++G       +F  ML+     +  T   ++ + S++  + +  ++ +
Sbjct: 467 SVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILN 526

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +   K G  L     +C +  YG+   L+++K+++  +
Sbjct: 527 TMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSM 564


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 231/759 (30%), Positives = 370/759 (48%), Gaps = 88/759 (11%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLG--------------------FSSRVYLVSGFIENY 123
           F+SL+K C S      +H   +  G                    F S   L +G + +Y
Sbjct: 47  FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 106

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G    A +          V +  ++  ++  G  D +  V   M   G   + F+L 
Sbjct: 107 LACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLP 166

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            VL A  ++     G   HG     GF S V   + NA++ +Y RCG   +A  +FDEIT
Sbjct: 167 HVLKACGELPSYRCGSAFHGLICCNGFESNV--FICNALVAMYSRCGSLEEASMIFDEIT 224

Query: 241 E---PDVVSWSERIAA---ACDGVEAFGLFKDLRF--NDFQINE----YTMINLLSSVGG 288
           +    DV+SW+  ++A   + +   A  LF  +    ++   NE     +++N+L + G 
Sbjct: 225 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 284

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + +   K++     + G    V +GNALI  Y KCG + +A  +F+ + FKD VSWN+M
Sbjct: 285 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344

Query: 349 IAGYSENGFF-----------------------------------NQALDMFCHMLEFSL 373
           +AGYS++G F                                   ++AL++F  M+    
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 404

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL---------DDSMI-SCLITTYG 423
           +PN  T+ S+L A ++  +  Q  ++H++ +K+  L          +D M+ + LI  Y 
Sbjct: 405 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464

Query: 424 KCNALNESKRVLSEI--DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGS 479
           KC +   ++ +  +I  +++N V    +           +AL+L+  +      V  N  
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 524

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDI-FVESAVIDMYCKCGTIEDAKRAFR 537
           T S +L ACA +  +  GK IH   L+  RY+    FV + +IDMY KCG ++ A+  F 
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
            + + S   W +MM GY  HG   E  ++F+KM K G  PD+IT+L VL +C H G+V +
Sbjct: 585 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 644

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
             +Y   MS  +GL P+ EHYAC +DLL R G L+ A  T+  MP+ P A +W +LLSAC
Sbjct: 645 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 704

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++ N++L   A +KL+E+  +N+ +Y L+SN+YA+AG W DV ++R  MK+  + K PG
Sbjct: 705 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 764

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            SW+     T  F+ GD SH  S +IY  L  L + + A
Sbjct: 765 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 803



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 144/604 (23%), Positives = 271/604 (44%), Gaps = 75/604 (12%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGV 103
           + +N LI    +  +   A+ +  R+   G RPD FT   ++KACG L         HG+
Sbjct: 128 VWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGL 187

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEF 160
               GF S V++ +  +  Y++ G +  A M F +       D +++ ++V  +V +   
Sbjct: 188 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 247

Query: 161 DKSKEVFVEMRSLGLE--LNEFS-------LTAVLGASFDVKEGEQIHGFGVKVGFLSGV 211
             + ++F +M  +  E   NE S       +    G+   V + +++HG  ++ G    V
Sbjct: 248 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV 307

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------------------ 253
              + NA+++ Y +CG   +AVK+F+ +   DVVSW+  +A                   
Sbjct: 308 --FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMR 365

Query: 254 ----ACDGV----------------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
                 D V                EA  LF+ + F+    N  T+I++LS+        
Sbjct: 366 KENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 425

Query: 294 AGKQIQAFCYKV----------GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF--KD 341
            G +I A+  K           G  E + + NALI MY KC     ARSIFD +    ++
Sbjct: 426 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 485

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            V+W  MI G+++ G  N AL +F  M+   + + PN YT++ IL A ++  +++   Q+
Sbjct: 486 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545

Query: 400 HSHIIKSGFLLDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           H+++++       +  + +CLI  Y KC  ++ ++ V   + +K+A+   ++ +      
Sbjct: 546 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 605

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE- 516
             +EAL+++  +  +    +  TF +VL AC+    ++QG + +  ++ A Y      E 
Sbjct: 606 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS-YFDSMSADYGLTPRAEH 664

Query: 517 -SAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
            +  ID+  + G ++ A R  + +  +  A  W A++     H       +  NK+ +  
Sbjct: 665 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN 724

Query: 575 VKPD 578
            + D
Sbjct: 725 AEND 728



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 226/504 (44%), Gaps = 68/504 (13%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR---DIITYNALISGLARF 59
           + L+  NG   +  +   L++ +++      A     +   R   D+I++N+++S   + 
Sbjct: 185 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 244

Query: 60  CQSGPALKLFDRL------RYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFS 110
             +  AL LF ++      +    R D  +  +++ ACGSL+   + + VHG  ++ G  
Sbjct: 245 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 304

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             V++ +  I+ YAK G + +A   F      D V++ AMV GY  +G F+ + E+F  M
Sbjct: 305 PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNM 364

Query: 171 RSLGLELNEFSLTAVL------GASFDV-------------------------------- 192
           R   + L+  + TAV+      G S +                                 
Sbjct: 365 RKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAF 424

Query: 193 KEGEQIHGFGVKVGFLS------GVCNHLN--NAIMNLYVRCGQKLDAVKMFDEIT--EP 242
            +G +IH + +K   L+      G    L   NA++++Y +C     A  +FD+I   E 
Sbjct: 425 SQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 484

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQ 297
           +VV+W+  I   A   D  +A  LF ++    + +  N YT+  +L +      +R GKQ
Sbjct: 485 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 544

Query: 298 IQAFCYKVGFMEVVS--IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           I A+  +    E  +  + N LI MY KCG V+ AR +FD +  K ++SW SM+ GY  +
Sbjct: 545 IHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 604

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSM 414
           G  ++ALD+F  M +   +P+  T   +L A S+   + Q +    S     G       
Sbjct: 605 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 664

Query: 415 ISCLITTYGKCNALNESKRVLSEI 438
            +C I    +   L+++ R + ++
Sbjct: 665 YACAIDLLARSGRLDKAWRTVKDM 688



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/419 (21%), Positives = 185/419 (44%), Gaps = 37/419 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLARFCQSGPALKLF 69
           D +    +++ +++  +F  AF    + +      D++T+ A+I+G ++   S  AL LF
Sbjct: 337 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 396

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKL----------GFSSRVYLV 116
            ++ + G  P+  T  S++ AC SL    +   +H   LK           G    + + 
Sbjct: 397 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 456

Query: 117 SGFIENYAKSGEIVSAEMCFRDC-LDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRS-- 172
           +  I+ Y+K     +A   F D  L+  N V +T M+ G+   G+ + + ++FVEM S  
Sbjct: 457 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 516

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  N ++++ +L A      ++ G+QIH + ++          + N ++++Y +CG  
Sbjct: 517 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 576

Query: 230 LDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +FD +++   +SW+  +        G EA  +F  +R   F  ++ T + +L + 
Sbjct: 577 DTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 636

Query: 287 GGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVS 344
               ++  G     +     G           I +  + G+++ A R++ D  +   +V 
Sbjct: 637 SHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV 696

Query: 345 WNSMIAG---YSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQ 395
           W ++++    +S       AL+    M       ++LI N Y  A   + V+  + L +
Sbjct: 697 WVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 755


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 220/766 (28%), Positives = 377/766 (49%), Gaps = 16/766 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I+  +IK G   +  L   L+S + K      A +   +   R +  +  +IS   +  
Sbjct: 43  HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTKSQ 102

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL LF+ +   G+ P+ FTFSS++++C   G L     VHG  LK GF     + S
Sbjct: 103 EFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGS 162

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              + Y+K G++  A   F    + D +++T M+   V   ++ ++   + EM   G+  
Sbjct: 163 SLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAGVPP 222

Query: 178 NEFSLTAVLGAS--FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           NEF+   +LGAS    ++ G+ IH   +  G    V   L  +++  Y       DAV++
Sbjct: 223 NEFTFVKLLGASSFLGLEFGKTIHSSIIVRGIPLNVV--LKTSLVYFYSHFSIMEDAVRV 280

Query: 236 FDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            +   E DV  W+  ++     +   EA G F ++R      N +T   +LS     R L
Sbjct: 281 LNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSL 340

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN-DARSIFDYLIFKDSVSWNSMIAG 351
             GKQI +   KVGF +   +GNAL+SMY KC     +A  +F  +I  + VSW ++I G
Sbjct: 341 DLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILG 400

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++GF      +   M++  + PN  T++ +L A S  K L+  +++H ++++    +D
Sbjct: 401 LVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRH--VD 458

Query: 412 DSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
             MI  + L+  Y     ++ +  V   +D ++ +   +L +       H  AL +   +
Sbjct: 459 GEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHM 518

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           +G    ++  +    + A A +   E GK +HC ++K+ +   + V ++++DMY KCG++
Sbjct: 519 YGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSL 578

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           EDAK+ F +I    +  WN ++ G A  G      + F +M   G +PD +T+L +L++C
Sbjct: 579 EDAKKVFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSAC 638

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
               L      Y   M  +H + PQ+EHY  +V +LGR G LE A   ++ M + P+A I
Sbjct: 639 SKGRLTEMGLEYFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 698

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           +++LL AC  +GN+ LG    +K L L P + + Y+LL++LY  +G      K R  M E
Sbjct: 699 FKTLLRACRYHGNLSLGEDMANKGLALAPSDPAFYILLADLYDESGKPELAQKTRNLMSE 758

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDS-SHSQSKEIYKELIKLYEHM 754
           K LCK+   S + V G  H F   D  +  ++K IY E+  + E +
Sbjct: 759 KGLCKKLSKSTVEVQGKVHSFVGEDVITVEKTKRIYAEIESIKEEI 804



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 1/297 (0%)

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           R G  I     K G +E + + N L+S+Y K   + +AR +FD +  +   +W  MI+ +
Sbjct: 39  RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAF 98

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +++  F  AL +F  M+   + PN +T +S++ + +    L    +VH  ++K+GF  + 
Sbjct: 99  TKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNS 158

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S L   Y KC  L E++ + S +   + +    + S LV A   +EAL  Y  +  +
Sbjct: 159 VVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKA 218

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               N  TF  +L A ++   LE GK IH   +      ++ ++++++  Y     +EDA
Sbjct: 219 GVPPNEFTFVKLLGA-SSFLGLEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDA 277

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            R         +  W +++ G+ ++    E    F +M   G+ P+  TY A+L+ C
Sbjct: 278 VRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLC 334



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 135/301 (44%), Gaps = 5/301 (1%)

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           S S +  + +H  +IK G L +  + + L++ Y K + +  ++++  E+ ++       +
Sbjct: 35  SSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVM 94

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S    +   A AL L+  +  S    N  TFS V+++CA + DL  G  +H   LK  +
Sbjct: 95  ISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGF 154

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           + +  V S++ D+Y KCG +++A+  F  +       W  M+        + E    +++
Sbjct: 155 EGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSE 214

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M K GV P+E T++ +L +    GL      + S +  + G+   +     +V       
Sbjct: 215 MIKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSSII--VRGIPLNVVLKTSLVYFYSHFS 272

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACT--IYGNIDLGLLAGSKLLELQPDNESTYVLL 687
           ++E A   ++      D  +W S++S     +     +G     + L L P+N +   +L
Sbjct: 273 IMEDAVRVLNSTG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAIL 331

Query: 688 S 688
           S
Sbjct: 332 S 332


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 225/751 (29%), Positives = 363/751 (48%), Gaps = 93/751 (12%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A KL  +L + GL+   F  + L+     CG + +   V G  +     S   ++SGF  
Sbjct: 23  ARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGF-- 80

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
             A SG++  AE  F    + D+V++ +M+ GY  NGE + + +    +  L L L    
Sbjct: 81  --ADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLAL---- 134

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG-----QKL------ 230
                          Q+HGF  K  F  G+   +  +++++Y++CG     QK+      
Sbjct: 135 ---------------QLHGFAEKFDF--GIDTCVETSVLDMYIKCGAMDFAQKVFCRTPN 177

Query: 231 --------------------DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDL 267
                                A+++F ++ E D VSW+  I+       G E    F ++
Sbjct: 178 PSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEM 237

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
               F+ N  T  ++LS+      L  G  + A   ++     V  G  LI MY KCG++
Sbjct: 238 WNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRL 297

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
             AR +FD L   ++VSW S+I G ++ GF  +AL +F  M E  +  + +T+A++L   
Sbjct: 298 ESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVC 357

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL------------------- 428
            + K +    Q+H+H I  G      + + L+T Y KC  +                   
Sbjct: 358 LSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWT 417

Query: 429 ------------NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
                        +++    ++ ++N +  N++ +  +      E L++Y  +     + 
Sbjct: 418 AMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKT 477

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +  TFS  + ACA +  L  G  I   A K  +  ++ V ++V+ MY +CG IE+A++ F
Sbjct: 478 DWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMF 537

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
             I   +L  WNAMM GYAQ+G   +V  +F KM   G  PD+I+Y++VL+ C H+G V 
Sbjct: 538 SSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVS 597

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E + Y   M+  HG+ P  EH+ C+VDLLGR G LE AK  I+QMP  P+A IW +LL+A
Sbjct: 598 EGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+GN  L  LA   LLEL  +   +Y LL+N+Y+ +G    V  +RK M++K + K P
Sbjct: 658 CRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNP 717

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           G SWI V    H F   D++H Q K++++ L
Sbjct: 718 GCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 227/473 (47%), Gaps = 44/473 (9%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++I  ++K+   ++A         RD +++N +IS L++       L  F  +  QG R
Sbjct: 184 NSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFR 243

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P++ T++S++ AC S+ + E    +H   +++     VY   G I+ YAK G + SA   
Sbjct: 244 PNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQV 303

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F    + + V++T+++ G    G  +++  +F +MR + +  ++F+L  VLG      D+
Sbjct: 304 FDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG------------------------- 227
             GEQ+H   +  G  S V   + NA++ +Y +CG                         
Sbjct: 364 SIGEQLHAHTITRGLDSSV--PVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMIT 421

Query: 228 ---QKLD---AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYT 278
              Q  D   A + FD++ E +V+SW+  +A         E   ++  +     + +  T
Sbjct: 422 AFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWIT 481

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
               +S+     +L  G QI A   K+GF   VS+ N++++MY +CGQ+ +A+ +F  ++
Sbjct: 482 FSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIV 541

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            K+ VSWN+M+AGY++NG   + +++F  ML    +P+  +  S+L   S+S  + +   
Sbjct: 542 MKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQY 601

Query: 399 VHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINAL 449
               + K  G         C++   G+   L ++K +++++  K NA    AL
Sbjct: 602 YFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGAL 654



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 188/415 (45%), Gaps = 42/415 (10%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R +   +++ A    +G    + + N L++MY  CG ++DA  +F  ++F +  SWN+MI
Sbjct: 18  RSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMI 77

Query: 350 AGYSENGFFNQALDMFCHMLE-----FSLIPNGYTMASILEAVSNSKS----LKQAMQVH 400
           +G++++G   +A  +F  M E     ++ + +GY     LEA   +      LK A+Q+H
Sbjct: 78  SGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLH 137

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRV-------------------------- 434
               K  F +D  + + ++  Y KC A++ +++V                          
Sbjct: 138 GFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVK 197

Query: 435 -----LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
                 +++ +++ V  N + S+L      AE L  +  +W      N  T++ VL AC 
Sbjct: 198 KALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACT 257

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           ++ DLE G  +H   ++     D++    +IDMY KCG +E A++ F  +   +   W +
Sbjct: 258 SIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTS 317

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++ G AQ G   E   LFN+M +  V  D+ T   VL  C     +      L   +   
Sbjct: 318 LIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ-LHAHTITR 376

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           GL   +     +V +  + G +  A    + MPI  D   W ++++A +  G+++
Sbjct: 377 GLDSSVPVANALVTMYAKCGDVWKANHAFELMPI-RDIISWTAMITAFSQAGDVE 430



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 137/645 (21%), Positives = 273/645 (42%), Gaps = 94/645 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ LI  G      L   L++ ++       A+R        ++ ++N +ISG A   
Sbjct: 25  KLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSG 84

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL-------------VKACGSLQENEI---VHGV- 103
           Q   A KLF+++  +    D+ +++S+             +KA GSL   ++   +HG  
Sbjct: 85  QMREAEKLFEKMPER----DSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFA 140

Query: 104 ---------------------CLKLGFSSRVYLVS---------GFIENYAKSGEIVSAE 133
                                C  + F+ +V+  +           I  Y+K G +  A 
Sbjct: 141 EKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKAL 200

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---F 190
             F    + D V++  M+     +G   ++   F+EM + G   N  +  +VL A    +
Sbjct: 201 ELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIY 260

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D++ G  +H   V++     V  +    ++++Y +CG+   A ++FD +TE + VSW+  
Sbjct: 261 DLEWGAHLHARIVRMEPCLDV--YAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSL 318

Query: 251 IAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA  LF  +R      +++T+  +L     ++ +  G+Q+ A     G 
Sbjct: 319 IGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGL 378

Query: 308 MEVVSIGNALISMYGKC-------------------------------GQVNDARSIFDY 336
              V + NAL++MY KC                               G V  AR  FD 
Sbjct: 379 DSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDK 438

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  ++ +SWNSM+A Y + G++ + L ++  ML   +  +  T ++ + A ++   L   
Sbjct: 439 MPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILG 498

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q+ +   K GF  + S+ + ++T Y +C  + E++++ S I  KN V  NA+ +     
Sbjct: 499 NQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQN 558

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               + +E++  +       +  ++  VL  C+    + +G+  + L++   +      E
Sbjct: 559 GQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQ-YYFLSMTKDHGISPMSE 617

Query: 517 SAV--IDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
             V  +D+  + G +E AK    ++  + + A W A++     HG
Sbjct: 618 HFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHG 662



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 186/431 (43%), Gaps = 52/431 (12%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           LD      LI  + K      A +        + +++ +LI G+A+      AL LF+++
Sbjct: 279 LDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQM 338

Query: 73  RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R   +  D FT ++++  C S ++    E +H   +  G  S V + +  +  YAK G++
Sbjct: 339 REVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDV 398

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE------------------------ 165
             A   F      D +++TAM+  +   G+ +K++E                        
Sbjct: 399 WKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRG 458

Query: 166 -------VFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
                  V+++M   G++ +  + +  + A  D+     G QI     K+GF S V   +
Sbjct: 459 YWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVS--V 516

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDF 272
            N+++ +Y RCGQ  +A KMF  I   ++VSW+  +A       G +   +F+ +     
Sbjct: 517 ANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGN 576

Query: 273 QINEYTMINLLSSVGGERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             ++ + +++LS       +  G+    +     G   +      ++ + G+ GQ+  A+
Sbjct: 577 VPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAK 636

Query: 332 SIFDYLIFKDSVS-WNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMAS 382
           ++ + + FK + + W +++A    +G    A     ++LE        + L+ N Y+ + 
Sbjct: 637 NLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESG 696

Query: 383 ILEAVSNSKSL 393
            ++ V+N + L
Sbjct: 697 KIQGVTNVRKL 707



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 17/203 (8%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           +K CA++  +   + +H   +       IF+++ +++MY  CG I DA R F  I   ++
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE------A 598
             WN M+ G+A  G   E   LF KM     + D +++ ++++   H G +        +
Sbjct: 71  YSWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKASGS 126

Query: 599 RTYLSCMSDLHGLIPQLEH------YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
             YL     LHG   + +          ++D+  + G ++ A+    + P  P    W S
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTP-NPSLFCWNS 185

Query: 653 LLSACTIYGNIDLGLLAGSKLLE 675
           ++   + YG++   L   +K+ E
Sbjct: 186 MIYGYSKYGSVKKALELFAKMPE 208


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 201/674 (29%), Positives = 356/674 (52%), Gaps = 8/674 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C SL+E   +  +  K G     +  +  +  + + G +  A   F       NV 
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           Y  M+ G+    + DK+ + FV MR   +E   ++ T +L   G   +++ G++IHG  V
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--A 260
           K GF   +       + N+Y +C Q  +A K+FD + E D+VSW+  +A  + +G+   A
Sbjct: 163 KSGFSLDL--FAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             + K +   + + +  T++++L +V   R++  GK+I  +  + GF  +V+I  AL+ M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG +  AR +FD ++ ++ VSWNSMI  Y +N    +A+ +F  ML+  + P   ++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
              L A ++   L++   +H   ++ G   + S+++ LI+ Y KC  ++ +  +  ++  
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +  V  NA+           +AL  +  +     + +  T+  V+ A A ++     K I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H + +++  D+++FV +A++DMY KCG I  A+  F  +    +  WNAM+ GY  HG  
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
                LF +M K  +KP+ +T+L+V+++C H+GLV         M + + +   ++HY  
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           +VDLLGR G L  A   I QMP+ P  +++ ++L AC I+ N++    A  +L EL PD+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
              +VLL+N+Y +A MW  VG++R  M  + L K PG S + +    H F++G ++H  S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700

Query: 741 KEIYKELIKLYEHM 754
           K+IY  L KL  H+
Sbjct: 701 KKIYAFLEKLICHI 714



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 296/611 (48%), Gaps = 21/611 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI  L+ KNG + +    T L+S F ++     A R      ++  + Y+ ++ G A+  
Sbjct: 55  QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL+ F R+RY  + P  + F+ L+K CG   E  +   +HG+ +K GFS  ++ ++
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G    YAK  ++  A   F    + D V++  +V GY  NG    + E+   M    L+ 
Sbjct: 175 GLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ +VL A   ++    G++IHG+ ++ GF S V  +++ A++++Y +CG    A +
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV--NISTALVDMYAKCGSLETARQ 292

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E +VVSW+  I A     +  EA  +F+ +     +  + +++  L +      
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I     ++G    VS+ N+LISMY KC +V+ A S+F  L  +  VSWN+MI G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +++NG    AL+ F  M   ++ P+ +T  S++ A++       A  +H  +++S    +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC A+  ++ +   + +++    NA+            ALEL+  +  
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGT 528
              + NG TF  V+ AC+    +E G  + C   +K  Y  ++ ++   A++D+  + G 
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAG--LKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLAVL 586
           + +A     ++           M+G  Q    H+  N   K ++  F + PD+  Y  +L
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQ---IHKNVNFAEKAAERLFELNPDDGGYHVLL 647

Query: 587 TSCCHAGLVRE 597
            +   A  + E
Sbjct: 648 ANIYRAASMWE 658


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 231/759 (30%), Positives = 370/759 (48%), Gaps = 88/759 (11%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLG--------------------FSSRVYLVSGFIENY 123
           F+SL+K C S      +H   +  G                    F S   L +G + +Y
Sbjct: 40  FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 99

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G    A +          V +  ++  ++  G  D +  V   M   G   + F+L 
Sbjct: 100 LACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLP 159

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            VL A  ++     G   HG     GF S V   + NA++ +Y RCG   +A  +FDEIT
Sbjct: 160 HVLKACGELPSYRCGSAFHGLICCNGFESNV--FICNALVAMYSRCGSLEEASMIFDEIT 217

Query: 241 E---PDVVSWSERIAA---ACDGVEAFGLFKDLRF--NDFQINE----YTMINLLSSVGG 288
           +    DV+SW+  ++A   + +   A  LF  +    ++   NE     +++N+L + G 
Sbjct: 218 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 277

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + +   K++     + G    V +GNALI  Y KCG + +A  +F+ + FKD VSWN+M
Sbjct: 278 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337

Query: 349 IAGYSENGFF-----------------------------------NQALDMFCHMLEFSL 373
           +AGYS++G F                                   ++AL++F  M+    
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 397

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL---------DDSMI-SCLITTYG 423
           +PN  T+ S+L A ++  +  Q  ++H++ +K+  L          +D M+ + LI  Y 
Sbjct: 398 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457

Query: 424 KCNALNESKRVLSEI--DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGS 479
           KC +   ++ +  +I  +++N V    +           +AL+L+  +      V  N  
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 517

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDI-FVESAVIDMYCKCGTIEDAKRAFR 537
           T S +L ACA +  +  GK IH   L+  RY+    FV + +IDMY KCG ++ A+  F 
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
            + + S   W +MM GY  HG   E  ++F+KM K G  PD+IT+L VL +C H G+V +
Sbjct: 578 SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 637

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
             +Y   MS  +GL P+ EHYAC +DLL R G L+ A  T+  MP+ P A +W +LLSAC
Sbjct: 638 GLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 697

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++ N++L   A +KL+E+  +N+ +Y L+SN+YA+AG W DV ++R  MK+  + K PG
Sbjct: 698 RVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPG 757

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            SW+     T  F+ GD SH  S +IY  L  L + + A
Sbjct: 758 CSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 796



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 144/604 (23%), Positives = 271/604 (44%), Gaps = 75/604 (12%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGV 103
           + +N LI    +  +   A+ +  R+   G RPD FT   ++KACG L         HG+
Sbjct: 121 VWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGL 180

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEF 160
               GF S V++ +  +  Y++ G +  A M F +       D +++ ++V  +V +   
Sbjct: 181 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 240

Query: 161 DKSKEVFVEMRSLGLE--LNEFS-------LTAVLGASFDVKEGEQIHGFGVKVGFLSGV 211
             + ++F +M  +  E   NE S       +    G+   V + +++HG  ++ G    V
Sbjct: 241 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV 300

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------------------ 253
              + NA+++ Y +CG   +AVK+F+ +   DVVSW+  +A                   
Sbjct: 301 --FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMR 358

Query: 254 ----ACDGV----------------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
                 D V                EA  LF+ + F+    N  T+I++LS+        
Sbjct: 359 KENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 418

Query: 294 AGKQIQAFCYKV----------GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF--KD 341
            G +I A+  K           G  E + + NALI MY KC     ARSIFD +    ++
Sbjct: 419 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 478

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            V+W  MI G+++ G  N AL +F  M+   + + PN YT++ IL A ++  +++   Q+
Sbjct: 479 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538

Query: 400 HSHIIKSGFLLDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           H+++++       +  + +CLI  Y KC  ++ ++ V   + +K+A+   ++ +      
Sbjct: 539 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 598

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE- 516
             +EAL+++  +  +    +  TF +VL AC+    ++QG + +  ++ A Y      E 
Sbjct: 599 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS-YFDSMSADYGLTPRAEH 657

Query: 517 -SAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
            +  ID+  + G ++ A R  + +  +  A  W A++     H       +  NK+ +  
Sbjct: 658 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN 717

Query: 575 VKPD 578
            + D
Sbjct: 718 AEND 721



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 226/504 (44%), Gaps = 68/504 (13%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR---DIITYNALISGLARF 59
           + L+  NG   +  +   L++ +++      A     +   R   D+I++N+++S   + 
Sbjct: 178 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 237

Query: 60  CQSGPALKLFDRL------RYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFS 110
             +  AL LF ++      +    R D  +  +++ ACGSL+   + + VHG  ++ G  
Sbjct: 238 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 297

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             V++ +  I+ YAK G + +A   F      D V++ AMV GY  +G F+ + E+F  M
Sbjct: 298 PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNM 357

Query: 171 RSLGLELNEFSLTAVL------GASFDV-------------------------------- 192
           R   + L+  + TAV+      G S +                                 
Sbjct: 358 RKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAF 417

Query: 193 KEGEQIHGFGVKVGFLS------GVCNHLN--NAIMNLYVRCGQKLDAVKMFDEIT--EP 242
            +G +IH + +K   L+      G    L   NA++++Y +C     A  +FD+I   E 
Sbjct: 418 SQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 477

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQ 297
           +VV+W+  I   A   D  +A  LF ++    + +  N YT+  +L +      +R GKQ
Sbjct: 478 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 537

Query: 298 IQAFCYKVGFMEVVS--IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           I A+  +    E  +  + N LI MY KCG V+ AR +FD +  K ++SW SM+ GY  +
Sbjct: 538 IHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 597

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSM 414
           G  ++ALD+F  M +   +P+  T   +L A S+   + Q +    S     G       
Sbjct: 598 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 657

Query: 415 ISCLITTYGKCNALNESKRVLSEI 438
            +C I    +   L+++ R + ++
Sbjct: 658 YACAIDLLARSGRLDKAWRTVKDM 681



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 186/420 (44%), Gaps = 39/420 (9%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLARFCQSGPALKLF 69
           D +    +++ +++  +F  AF    + +      D++T+ A+I+G ++   S  AL LF
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSL----QENEIVHGVCLKL----------GFSSRVYL 115
            ++ + G  P+  T  S++ AC SL    Q  EI H   LK           G    + +
Sbjct: 390 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI-HAYSLKNCLLTLDNDFGGEDEDLMV 448

Query: 116 VSGFIENYAKSGEIVSAEMCFRDC-LDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRS- 172
            +  I+ Y+K     +A   F D  L+  N V +T M+ G+   G+ + + ++FVEM S 
Sbjct: 449 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508

Query: 173 -LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
             G+  N ++++ +L A      ++ G+QIH + ++          + N ++++Y +CG 
Sbjct: 509 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568

Query: 229 KLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
              A  +FD +++   +SW+  +        G EA  +F  +R   F  ++ T + +L +
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628

Query: 286 VGGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSV 343
                ++  G     +     G           I +  + G+++ A R++ D  +   +V
Sbjct: 629 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 688

Query: 344 SWNSMIAG---YSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQ 395
            W ++++    +S       AL+    M       ++LI N Y  A   + V+  + L +
Sbjct: 689 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 748


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 206/666 (30%), Positives = 356/666 (53%), Gaps = 27/666 (4%)

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKA------------CGSLQENEIVHGVCLKLGF 109
           + PAL +F ++    + P+ FTFS L+KA              +LQ  +I    CLK G 
Sbjct: 29  TSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQI-QTQCLKRGV 87

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           +  +++ +  I+ Y K G    A   F      D V++  ++CGY  NG    + ++FV+
Sbjct: 88  NQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVD 147

Query: 170 MRSLGLELNEFSLTAVLGAS--FD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M     + N+ ++ ++L +   F+ + +G  IHGFG+K GF  G+ +HLNNA+M++Y +C
Sbjct: 148 MLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGF--GLDSHLNNALMSMYAKC 205

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLL 283
                +  +FDE+ E  VVSW+  I     +G+  +A   FK++    F  +  T++NL+
Sbjct: 206 DDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLV 265

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S+          + +  +  K GF    S+  +L+ +Y K G  N A+ ++ Y   KD +
Sbjct: 266 SANAFP------ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLI 319

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           +  ++I+ YSE G    A++ F   ++  + P+   +  +L  ++N          H + 
Sbjct: 320 TLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYG 379

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +KSG   D  + + LI+ Y + + +  +  +  ++ +K  +  N++ S  V A   ++A+
Sbjct: 380 VKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAM 439

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           EL+  +    ++ +  T + +L  C  + +L  G+ +H   L+     + F+ +A+IDMY
Sbjct: 440 ELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMY 499

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG ++ A++ F  I    LA WNA++ GY+ +G  H     ++K+ + G+KPD+IT+L
Sbjct: 500 SKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFL 559

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            VL +C H GLV     Y + M+  +GL+P L+HYACIV LLG+ GL + A   I++M I
Sbjct: 560 GVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEI 619

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
            PD+ +W +LL+AC I   + LG     KL  L   N   YVL+SNLYA  G W+DV ++
Sbjct: 620 QPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARV 679

Query: 704 RKEMKE 709
           R+ MK+
Sbjct: 680 REMMKD 685



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 136/600 (22%), Positives = 262/600 (43%), Gaps = 52/600 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI +  +K G +    + T+LI  + K   F    R +FD  + RD++++N LI G ++ 
Sbjct: 77  QIQTQCLKRGVNQFIHVHTSLIDLYMKLG-FTSHARNMFDQMSYRDVVSWNVLICGYSQN 135

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLV 116
                A++LF  +  +  +P+  T  SL+ +CG  +   +   +HG  +K GF    +L 
Sbjct: 136 GYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLN 195

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK  ++ ++++ F +  +   V++  M+  Y  NG FDK+   F EM   G  
Sbjct: 196 NALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFH 255

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +  ++  ++ A+      E +H + VK GF +     +  +++ LY + G    A +++
Sbjct: 256 PSSVTIMNLVSAN---AFPENVHCYVVKCGFTNDA--SVVTSLVCLYAKQGFTNTAKQLY 310

Query: 237 DEITEPDVVSWSERIAAACD------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
                 D+++ +  I++  +       VE F   + ++  D + +   +I +L  +    
Sbjct: 311 KYYPTKDLITLTAIISSYSEKGDIESAVECF--IQTIQL-DIKPDAVALIGVLHGITNPS 367

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G     +  K G      + N LIS+Y +  ++  A S+F  +  K  ++WNSMI+
Sbjct: 368 HFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMIS 427

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G  + G  + A+++F  M      P+  T+AS+L       +L+    +HS+I+++   +
Sbjct: 428 GCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRV 487

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +D + + LI  Y KC  L+ +++V   I        NA+ S          A   Y  + 
Sbjct: 488 EDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQ 547

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
               + +  TF  VL AC        G  ++   L   Y   +  E  ++          
Sbjct: 548 EQGLKPDKITFLGVLAACT------HGGLVY---LGLEYFNIMTKEYGLM---------- 588

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
                       SL  +  ++    + G + E     NKM    ++PD   + A+L +CC
Sbjct: 589 -----------PSLQHYACIVALLGKEGLFKEAIEFINKME---IQPDSAVWGALLNACC 634



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKA---------CAAMTDLEQGKAIHCLA 504
           ++ +  + AL ++R I  +    N  TFS+++KA         C +   L Q + I    
Sbjct: 24  LFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQC 82

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           LK   +Q I V +++ID+Y K G    A+  F ++    +  WN ++ GY+Q+G  +   
Sbjct: 83  LKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAI 142

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
            LF  M +   KP++ T +++L SC    L+ + R+
Sbjct: 143 QLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRS 178


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 355/711 (49%), Gaps = 86/711 (12%)

Query: 124  AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV-WNG---EFDKSK-------EVFVEMRS 172
            A +  ++S+ + F D      V Y  +   Y+ WN    EF  S        EVF E+  
Sbjct: 608  AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 667

Query: 173  LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             G+  +    +  L       D+  G +IHG  +K GF   V  +L  A+MN Y RC   
Sbjct: 668  KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV--YLRCALMNFYGRCWGL 725

Query: 230  LDAVKMFDEITEPDVVSWSERIAAACD------GVEAFGLFKDLRFNDFQINEYTMINLL 283
              A ++F E+  P+ + W+E I           GVE   LF+ ++F+  +    T++ +L
Sbjct: 726  EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVE---LFRKMQFSFLKAETATIVRVL 782

Query: 284  SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
             + G    L A KQI  + ++ G    VS+ N LISMY K G++  AR +FD +  +++ 
Sbjct: 783  QACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTS 842

Query: 344  SWNSMIAGYSENGFFNQALDMFCHMLEFS------------------------------- 372
            SWNSMI+ Y+  GF N A  +F + LE S                               
Sbjct: 843  SWNSMISSYAALGFLNDAWSLF-YELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 901

Query: 373  -----LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
                   PN  +M S+L+A+S    L    + H +++++GF  D  + + LI  Y K ++
Sbjct: 902  MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 961

Query: 428  LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR-------------------- 467
            L  ++ V   +  +N    N+L S   +     +AL L                      
Sbjct: 962  LXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 1021

Query: 468  -TIWGSCREV---NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
              +WG  R+    N ++ + +L+ACA+++ L++GK IHCL+++  + +D+FV +A+IDMY
Sbjct: 1022 YAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMY 1081

Query: 524  CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
             K  ++++A + FR+I   +LA WN M+MG+A  G   E  ++FN+M K GV PD IT+ 
Sbjct: 1082 SKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFT 1141

Query: 584  AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            A+L++C ++GL+ E   Y   M   + ++P+LEHY C+VDLLGR G L+ A   I  MP+
Sbjct: 1142 ALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPL 1201

Query: 644  PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
             PDA IW +LL +C I+ N+     A   L +L+P+N + Y+L+ NLY+    W D+  L
Sbjct: 1202 KPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHL 1261

Query: 704  RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            R+ M    +     +SWI +    H F + +  H  + +IY EL +L   M
Sbjct: 1262 RELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEM 1312



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/513 (22%), Positives = 219/513 (42%), Gaps = 97/513 (18%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYN-ALISGL-AR 58
            +I+  LIK G  LD  L   L++ + +     +A +   +  N + + +N A+I  L + 
Sbjct: 695  EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSE 754

Query: 59   FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYL 115
              Q G  ++LF ++++  L+ +  T   +++ACG   +L   + +HG   + G  S V L
Sbjct: 755  KLQKG--VELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSL 812

Query: 116  VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY--------------------- 154
             +  I  Y+K+G++  A   F    + +  ++ +M+  Y                     
Sbjct: 813  CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM 872

Query: 155  -----VWN----GEF-----DKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQ 197
                  WN    G F     ++   +   M+  G + N  S+T+VL A  +   +  G++
Sbjct: 873  KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKE 932

Query: 198  IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---- 253
             HG+ ++ GF   V  ++  +++++YV+      A  +FD +   ++ +W+  ++     
Sbjct: 933  THGYVLRNGFDCDV--YVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFK 990

Query: 254  --------ACDGVEAFGLFKDLRFNDFQINEYTMIN---------------LLSSVGGER 290
                      + +E  G+  DL   +  I+ Y M                 LL +     
Sbjct: 991  GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLS 1050

Query: 291  ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +L+ GK+I     + GF+E V +  ALI MY K   + +A  +F  +  K   SWN MI 
Sbjct: 1051 LLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIM 1110

Query: 351  GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            G++  G   +A+ +F  M +  + P+  T  ++L A  N           S +I  G+  
Sbjct: 1111 GFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN-----------SGLIGEGWKY 1159

Query: 411  DDSMIS------------CLITTYGKCNALNES 431
             DSMI+            C++   G+   L+E+
Sbjct: 1160 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEA 1192



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/371 (20%), Positives = 164/371 (44%), Gaps = 41/371 (11%)

Query: 19   TTLISHFTKFADFRRAFRFLFDTQNRD----IITYNALISGLARFCQSGPALKLFDRLRY 74
             ++IS +        A+   ++ ++ D    I+T+N L+SG          L +  R++ 
Sbjct: 845  NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 904

Query: 75   QGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
            +G +P++ + +S+++A    G L   +  HG  L+ GF   VY+ +  I+ Y K+  + S
Sbjct: 905  EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXS 964

Query: 132  AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--------------- 176
            A+  F +  + +  A+ ++V GY + G F+ +  +  +M   G++               
Sbjct: 965  AQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAM 1024

Query: 177  ---------LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
                      N  S+T +L A      +++G++IH   ++ GF+  V   +  A++++Y 
Sbjct: 1025 WGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDV--FVATALIDMYS 1082

Query: 225  RCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMIN 281
            +     +A K+F  I    + SW+  I   A    G EA  +F +++      +  T   
Sbjct: 1083 KSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTA 1142

Query: 282  LLSSVGGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            LLS+     ++  G K   +       +  +     ++ + G+ G +++A  +   +  K
Sbjct: 1143 LLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 1202

Query: 341  -DSVSWNSMIA 350
             D+  W +++ 
Sbjct: 1203 PDATIWGALLG 1213


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 215/675 (31%), Positives = 356/675 (52%), Gaps = 25/675 (3%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
            H   +KLG  +  Y  +  I +YAK  E+ SA   F +    D V++ A++  +  +G+
Sbjct: 15  THCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGD 74

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVL-GASF--DVKEGEQIHGFGVKVGFLSGVCNHLN 216
            D + ++   MR      +  +  ++L G ++   +K G+Q+H   +KVG    V +   
Sbjct: 75  LDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFS--G 132

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-----ACDGVEAFGLFKDLRFND 271
           +A++++Y +CG+  D   +F  + E + VSW+  +A+      CD   AF +   +    
Sbjct: 133 SALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCD--MAFWVLSCMELEG 190

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            +I++ T+  LL+ +      +   Q+     K G     ++ NA I+ Y +C  + DA 
Sbjct: 191 VEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAE 250

Query: 332 SIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            +FD  +  +D V+WNSM+  Y  +   + A  +F  M  F   P+ YT   I+ A S  
Sbjct: 251 RVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQ 310

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCN--ALNESKRVLSEIDKKNAVHI 446
           +       +H  +IK G  LD+S+   + LI+ Y + N   + ++ R+   +D K+    
Sbjct: 311 EHKTCGKCLHGLVIKRG--LDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTW 368

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N++ +  V      +AL L+  +     E++  TFS V+++C+ +  L+ G+  H LALK
Sbjct: 369 NSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALK 428

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             +D + +V S++I MY KCG IEDA+++F    +D+   WN+++ GYAQHG  +   +L
Sbjct: 429 VGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDL 488

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F  M +  VK D IT++AVLT+C H GLV E   ++  M    G+ P+ EHYAC +DL G
Sbjct: 489 FYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYG 548

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R G L+ A   ++ MP  PDA + ++LL AC   G+I+L       LLEL+P+   TYV+
Sbjct: 549 RAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVI 608

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY-- 744
           LS +Y    MW +   + + M+E+ + K PG+SWI V    H F A D SH Q +EIY  
Sbjct: 609 LSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFNAEDHSHPQCEEIYIL 668

Query: 745 ----KELIKLYEHMV 755
                E IKL+++ V
Sbjct: 669 LQQLNEGIKLFDNFV 683



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 242/507 (47%), Gaps = 22/507 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G   DP  +  LI+ + K  +   A +   +  +RD +++NA+IS  A         
Sbjct: 20  IKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTW 79

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +L   +R      D+ TF S++K     G L+  + +H V LK+G S  V+  S  ++ Y
Sbjct: 80  QLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMY 139

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           AK G +    + F+   + + V++  +V  Y   G+ D +  V   M   G+E+++ +++
Sbjct: 140 AKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVS 199

Query: 184 AVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-E 238
            +L     A F  K   Q+H   VK G    + N + NA +  Y  C    DA ++FD  
Sbjct: 200 PLLTLLDNAMF-YKLTMQLHCKIVKHGL--ELFNTVCNATITAYSECCSLQDAERVFDGA 256

Query: 239 ITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   D+V+W+  + A     +   AF +F D++   F+ + YT   ++ +   +     G
Sbjct: 257 VLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCG 316

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQ--VNDARSIFDYLIFKDSVSWNSMIAGYS 353
           K +     K G    V + NALISMY +     + DA  IF  +  KD  +WNS++AGY 
Sbjct: 317 KCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYV 376

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           + G    AL +F  M    +  + YT ++++ + S+  +L+   Q H   +K GF  +  
Sbjct: 377 QVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSY 436

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIW 470
           + S LI  Y KC  + ++++      K NA+  N++  +  YA  H +   AL+L+  + 
Sbjct: 437 VGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSI--IFGYAQ-HGQGNIALDLFYMMK 493

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQG 497
               +++  TF  VL AC+    +E+G
Sbjct: 494 ERKVKLDHITFVAVLTACSHNGLVEEG 520



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 5/281 (1%)

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           +S +L   +  H   IK G + D    + LIT+Y KC  LN + +V  E+  ++ V  NA
Sbjct: 5   HSLTLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNA 64

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           + S    +       +L   +  S    +  TF  +LK  A +  L+ G+ +H + LK  
Sbjct: 65  IISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVG 124

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
             +++F  SA++DMY KCG ++D    F+ +   +   WN ++  Y++ G       + +
Sbjct: 125 LSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLS 184

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC--IVDLLG 626
            M   GV+ D+ T   +LT   +A +  +    L C    HGL  +L +  C   +    
Sbjct: 185 CMELEGVEIDDGTVSPLLTLLDNA-MFYKLTMQLHCKIVKHGL--ELFNTVCNATITAYS 241

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
               L+ A+   D   +  D   W S+L A  ++   DL  
Sbjct: 242 ECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAF 282



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 101/192 (52%), Gaps = 5/192 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFAD--FRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++ L+IK G      +S  LIS + +F D     A R  F    +D  T+N++++G  + 
Sbjct: 319 LHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQV 378

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             S  AL+LF ++R   +  D +TFS+++++C    +LQ  +  H + LK+GF +  Y+ 
Sbjct: 379 GLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVG 438

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I  Y+K G I  A   F      + + + +++ GY  +G+ + + ++F  M+   ++
Sbjct: 439 SSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVK 498

Query: 177 LNEFSLTAVLGA 188
           L+  +  AVL A
Sbjct: 499 LDHITFVAVLTA 510



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 113/276 (40%), Gaps = 47/276 (17%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q + L +K G   +  + ++LI  ++K     D R++F     T   + I +N++I G A
Sbjct: 421 QFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFE---ATSKDNAIVWNSIIFGYA 477

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRV 113
           +  Q   AL LF  ++ + ++ D  TF +++ AC   G ++E    +  +    G   R 
Sbjct: 478 QHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQ 537

Query: 114 YLVSGFIENYAKSGEIVSA-----EMCF--------------RDCLDLDNVAYTAMV--- 151
              +  I+ Y ++G +  A      M F              R C D++  +  A +   
Sbjct: 538 EHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLE 597

Query: 152 ------CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKV 205
                 C YV   E     +++ E  S+   + E  +  V G S+ ++    +H F  + 
Sbjct: 598 LEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSW-IEVKNNVHAFNAE- 655

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
                  +H +     +Y+   Q  + +K+FD   +
Sbjct: 656 -------DHSHPQCEEIYILLQQLNEGIKLFDNFVD 684


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 198/578 (34%), Positives = 311/578 (53%), Gaps = 14/578 (2%)

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           S  ++ G Q+HG   K+GF  G    L N ++++YV+CG+   A ++F  + + +VVSW+
Sbjct: 17  SSSLRGGVQLHGAITKMGF--GSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWT 74

Query: 249 ERIAAACDGVEAFG---LFKDLRF-NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
             +       +A G   L  ++R  ++   NEYT+   L +        AG  I   C +
Sbjct: 75  ALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVR 134

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMIAGYSENGFFNQALD 363
            G+ E   + ++L+ +Y K G++ DAR +FD       + +WN+M++GY+  G    AL 
Sbjct: 135 AGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALL 194

Query: 364 MFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLI 419
           +F  M   E    P+ +T AS+L+A S   + ++  QVH+ +  SGF    + I    L+
Sbjct: 195 VFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALV 254

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC  L  + +V   +++KN +   A+           EALEL+R  W S    +  
Sbjct: 255 DMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSH 314

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             S V+   A    +EQG+ +HC  +K     D+   ++++DMY KCG  ++A+R FR++
Sbjct: 315 VLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREM 374

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
              ++  W  M+ G  +HG   E   LF +M   GV+PDE+TYLA+L++C HAGLV E R
Sbjct: 375 RAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECR 434

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            Y SC+     + P+ EHYAC+VDLLGR G L  A+  I  MP+ P   +WQ+LLSAC +
Sbjct: 435 RYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRV 494

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
           + ++ +G  AG  LL +  DN   YV LSN+ A AG W +  K+R  M+ + L K+ G S
Sbjct: 495 HKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCS 554

Query: 720 WIHVGGYTHHFYAG---DSSHSQSKEIYKELIKLYEHM 754
           W+ VG   H FY G   + +H Q+ +I + L  +   M
Sbjct: 555 WVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRM 592



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 231/478 (48%), Gaps = 26/478 (5%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL+    +HG   K+GF S   L +  I+ Y K GE+  A   F    D + V++TA++ 
Sbjct: 19  SLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMV 78

Query: 153 GYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFL 208
           G++ +G+      +  EMR+      NE++L+A L A     D   G  IHG  V+ G+ 
Sbjct: 79  GFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQ 138

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERI---AAACDGVEAFGLF 264
               + + ++++ +Y + G+  DA ++FD       + +W+  +   A A  G +A  +F
Sbjct: 139 EH--DVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVF 196

Query: 265 KDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS--IGNALISM 320
           +++R ++   Q +E+T  +LL +  G    R G Q+ A     GF    +  +  AL+ M
Sbjct: 197 REMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDM 256

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KC ++  A  +F+ L  K+ + W +++ G+++ G   +AL++F         P+ + +
Sbjct: 257 YVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVL 316

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           +S++  +++   ++Q  QVH + IK     D S  + ++  Y KC   +E++R+  E+  
Sbjct: 317 SSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRA 376

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGK 498
            N V    + + L       EA+ L+  +     E +  T+  +L AC  A + D E  +
Sbjct: 377 PNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVD-ECRR 435

Query: 499 AIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
              C+    R D+ +  ++     ++D+  + G + +A+   R +  +   G W  ++
Sbjct: 436 YFSCI----RRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLL 489



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 184/366 (50%), Gaps = 20/366 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARF 59
           I+ L ++ G+    +++++L+  ++K      A R +FD       I T+NA++SG A  
Sbjct: 128 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARR-VFDGAGLGSGIATWNAMVSGYAHA 186

Query: 60  CQSGPALKLFDRLR-YQGL-RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS--SR 112
                AL +F  +R ++G  +PD FTF+SL+KAC   G+ +E   VH      GFS  S 
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
             L    ++ Y K   +  A   F      + + +TA+V G+   G+  ++ E+F     
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G   +   L++V+G   D   V++G Q+H +G+K    +G      N+I+++Y++CG  
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK--DPTGTDVSAGNSIVDMYLKCGLP 364

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A +MF E+  P+VVSW+  +        G EA  LF+++R    + +E T + LLS+ 
Sbjct: 365 DEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 424

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFKDSVS- 344
               ++   ++  +   +   +   +   A ++ + G+ G++ +AR +   +  + +V  
Sbjct: 425 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 484

Query: 345 WNSMIA 350
           W ++++
Sbjct: 485 WQTLLS 490



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 113/235 (48%), Gaps = 12/235 (5%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +A +L A + S SL+  +Q+H  I K GF  D  + + LI  Y KC  L+ +  V   + 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-----NGSTFSIVLKACAAMTDL 494
            +N V   AL   +V    H +A    R + G  R       N  T S  LKAC  + D 
Sbjct: 67  DRNVVSWTAL---MVGFLRHGDATGCLRLL-GEMRTASEAAPNEYTLSASLKACCVVGDT 122

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS-LAGWNAMMMG 553
             G  IH L ++A Y +   V S+++ +Y K G I DA+R F      S +A WNAM+ G
Sbjct: 123 AAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182

Query: 554 YAQHGCYHEVSNLFNKMSKFGV--KPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           YA  G   +   +F +M +     +PDE T+ ++L +C   G  RE     + M+
Sbjct: 183 YAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMT 237



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 1   QIYSLLIKNGHHL--DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q+++ +  +G     + IL+  L+  + K      A +     + +++I + A++ G A+
Sbjct: 231 QVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQ 290

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             Q   AL+LF R    G RPD+   SS+V        +++   VH   +K    + V  
Sbjct: 291 EGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSA 350

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  ++ Y K G    AE  FR+    + V++T MV G   +G   ++  +F EMR+ G+
Sbjct: 351 GNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGV 410

Query: 176 ELNEFSLTAVLGA 188
           E +E +  A+L A
Sbjct: 411 EPDEVTYLALLSA 423


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 192/608 (31%), Positives = 326/608 (53%), Gaps = 71/608 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N I++ Y + G+  +A ++F+E+ EPD VSW+  I       +   A G+F+++  +D  
Sbjct: 83  NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             ++T+ N+L+S      L  G+++ +F  K G    +S+ N+L++MY K G    A+ +
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202

Query: 334 FD-------------------------------YLIFKDSVSWNSMIAGYSENGFFNQAL 362
           FD                                +I +D VSWN+MI+GY+++GF  +AL
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREAL 262

Query: 363 DMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF------------- 408
           D+F  ML + S  P+ +T+AS L A +N ++LK   Q+H+HII++ F             
Sbjct: 263 DIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISM 322

Query: 409 ------------LLDDSMIS--------CLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
                       +++ SMIS         L+  Y K   +N ++R+   +  ++ V   A
Sbjct: 323 YSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTA 382

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +    V    + +A+EL+R++     + N  T + +L   +++  L+ G+ IH  A ++ 
Sbjct: 383 MIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSG 442

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNL 566
               + V +A+I MY K G+I DA+  F  I   RD++  W +M++  AQHG   E   L
Sbjct: 443 NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTIT-WTSMIIALAQHGLGEEALTL 501

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F +M + G+KPD ITY+ VL++C H GLV + R+Y + M + H +IP   HYAC++DL G
Sbjct: 502 FERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFG 561

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R GLL+ A   I+ MPI PD   W SLL++C ++ N++L  +A  +LL ++P+N   Y  
Sbjct: 562 RAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSA 621

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           L+N+Y++ G W +   +RK MK+K + K+ G+SW+ +    H F   D  H Q   IY+ 
Sbjct: 622 LANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEM 681

Query: 747 LIKLYEHM 754
           + K+++ +
Sbjct: 682 MAKIWKEI 689



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 229/540 (42%), Gaps = 115/540 (21%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR--- 58
           I++ +IK G HL   L   L++ + K      A R   +   + + ++N ++SG A+   
Sbjct: 35  IHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGR 94

Query: 59  -------------------------FCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKA 90
                                    + Q G    A+ +F  +    + P  FT ++++ +
Sbjct: 95  LEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLAS 154

Query: 91  CGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC------------ 135
           C +++       VH   +K G SS + + +  +  YAKSG+ V+A++             
Sbjct: 155 CAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSW 214

Query: 136 -------------------FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGL 175
                              F   ++ D V++ AM+ GY  +G   ++ ++F +M      
Sbjct: 215 NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSS 274

Query: 176 ELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGF--LSGVCNHLNN------------- 217
           + ++F+L + L A     ++K G+QIH   ++  F     V N L +             
Sbjct: 275 KPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQK 334

Query: 218 ----------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GV 258
                           A+++ YV+ G    A ++FD +   DVV+W+  I          
Sbjct: 335 IIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQ 394

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           +A  LF+ +     + N YT+  +LS       L  G+QI A   + G    VS+ NALI
Sbjct: 395 DAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALI 454

Query: 319 SMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           +MY K G +NDAR +F+ + +K D+++W SMI   +++G   +AL +F  MLE  + P+ 
Sbjct: 455 TMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDH 514

Query: 378 YTMASILEA------VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            T   +L A      V   +S    MQ    II +      S  +C+I  +G+   L E+
Sbjct: 515 ITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPT-----PSHYACMIDLFGRAGLLQEA 569



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 106/490 (21%), Positives = 188/490 (38%), Gaps = 100/490 (20%)

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            GK I A   K G    V + N L++ Y K G + DA  +FD +  K   SWN +++GY+
Sbjct: 31  TGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYA 90

Query: 354 ENGF-------------------------------FNQALDMFCHMLEFSLIPNGYTMAS 382
           + G                                F  A+ MF  M+   + P  +T+ +
Sbjct: 91  KGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTN 150

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID--- 439
           +L + +  + L    +VHS ++K G     S+ + L+  Y K      +K V   +    
Sbjct: 151 VLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210

Query: 440 ----------------------------KKNAVHINALASVLVYASCHAEALELY-RTIW 470
                                       +++ V  NA+ S         EAL+++ + + 
Sbjct: 211 TSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLM 270

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ------------------- 511
            S  + +  T +  L ACA + +L+ GK IH   ++  +D                    
Sbjct: 271 DSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVE 330

Query: 512 --------------DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
                         D+   +A++D Y K G I  A+R F  +    +  W AM++GY Q+
Sbjct: 331 IAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQN 390

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   +   LF  M K G KP+  T LA + S   +    +    +   +   G    +  
Sbjct: 391 GFNQDAMELFRSMIKEGPKPNNYT-LATMLSVSSSLASLDHGRQIHASATRSGNASSVSV 449

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE-- 675
              ++ +  + G +  A+   + +    D   W S++ A   +G  +  L    ++LE  
Sbjct: 450 SNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENG 509

Query: 676 LQPDNESTYV 685
           ++PD+  TYV
Sbjct: 510 IKPDH-ITYV 518



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 52/355 (14%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEI--- 99
           RD++++NA+ISG  +      AL +F + L     +PD FT +S + AC +L+  ++   
Sbjct: 240 RDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQ 299

Query: 100 VHGVCLKLGFSS---------RVYLVSGFIE------------------------NYAKS 126
           +H   ++  F +          +Y  SG +E                         Y K 
Sbjct: 300 IHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKL 359

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV- 185
           G+I  A   F      D VA+TAM+ GYV NG    + E+F  M   G + N ++L  + 
Sbjct: 360 GDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATML 419

Query: 186 --LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EP 242
               +   +  G QIH    + G  S V   ++NA++ +Y + G   DA  +F+ I  + 
Sbjct: 420 SVSSSLASLDHGRQIHASATRSGNASSVS--VSNALITMYAKSGSINDARWVFNLIHWKR 477

Query: 243 DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK--- 296
           D ++W+  I A      G EA  LF+ +  N  + +  T + +LS+     ++  G+   
Sbjct: 478 DTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYY 537

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIA 350
            +    +K+  +   S    +I ++G+ G + +A +  + + I  D ++W S++A
Sbjct: 538 NLMQNAHKI--IPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLA 590



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 9/250 (3%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           +LD I  T L+  + K  D   A R     + RD++ + A+I G  +   +  A++LF  
Sbjct: 343 NLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRS 402

Query: 72  LRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +  +G +P+ +T +++     +  SL     +H    + G +S V + +  I  YAKSG 
Sbjct: 403 MIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGS 462

Query: 129 IVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           I  A   F       D + +T+M+     +G  +++  +F  M   G++ +  +   VL 
Sbjct: 463 INDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLS 522

Query: 188 ASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPD 243
           A      V++G   +        +    +H    +++L+ R G   +A    + +  EPD
Sbjct: 523 ACTHVGLVEQGRSYYNLMQNAHKIIPTPSHY-ACMIDLFGRAGLLQEAHAFIENMPIEPD 581

Query: 244 VVSWSERIAA 253
           V++W   +A+
Sbjct: 582 VIAWGSLLAS 591


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 383/736 (52%), Gaps = 15/736 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  + + GH  D I   T+++ +        A +      N +++ +N +ISG A+  
Sbjct: 229 KVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRG 288

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
            +  A+  F  L+  GL+    +  S++ A  SL       +VH    K G    VY+ S
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGS 348

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  ++ +A+  F    + + V + AM+ G+  NG   +  E F  M+  G + 
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQP 408

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+ T++  A   +     G Q+H   +K  F S +   + NA++++Y + G   +A K
Sbjct: 409 DEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNL--FVANALVDMYAKSGALKEARK 466

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F+ +   D VSW+  I          EAF +F+ +  N    +E ++ +++S+    + 
Sbjct: 467 QFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE 526

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ G+Q      KVG       G++LI MY KCG V  AR +F  +  ++ VS N++IAG
Sbjct: 527 LKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+  G   +A+ +F  +    L P   T A +L+    +  L    Q+H  ++K GFL  
Sbjct: 587 YTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645

Query: 412 DSMISC-LITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
             M+   L+  Y       +S+ + SE+   K  V   AL S     + H +AL+ Y+ +
Sbjct: 646 SEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  + + F+ VL+ACA M+ L+ G+ IH L     ++ D    S++IDMY KCG +
Sbjct: 706 RSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDV 765

Query: 530 EDAKRAFRKICR-DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           + + + FR++ R +++  WN+M++G A++G   E   +F +M +  + PDE+T+L VL++
Sbjct: 766 KGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAG V E R     M + + L+P+++H  C+VD+LGR G L  A+  I+++    D  
Sbjct: 826 CSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM 885

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL AC  +G+   G  A  KL+EL+P + S+YVLLS++YA +  W+    LR+EMK
Sbjct: 886 LWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMK 945

Query: 709 EKFLCKEPGYSWIHVG 724
            K + K PGYSWI  G
Sbjct: 946 LKGVKKLPGYSWIEPG 961



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 290/604 (48%), Gaps = 41/604 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S  +K G  L  +L   ++  + K  +   A +     + +D+  +N+++S       
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
               ++ F  +    +RP+ FTF+ ++ AC  LQ+      VH    K GF  R +   G
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK   +  A + F   L+LD V++TA++ GYV +G   ++ +VF  M+ +G   +
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + +L  V+                                  N YV  G+  DA K+F +
Sbjct: 243 QITLVTVV----------------------------------NAYVALGRLADARKLFTQ 268

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I  P+VV+W+  I+         EA   F +L+    +    ++ ++LS++    +L  G
Sbjct: 269 IPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYG 328

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             + A   K G  + V +G+AL++MY KC +++ A+ +F+ L  ++ V WN+M+ G+++N
Sbjct: 329 SMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQN 388

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   + ++ F  M      P+ +T  SI  A ++   L    Q+H+ +IK+ F  +  + 
Sbjct: 389 GLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVA 448

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y K  AL E+++    +   + V  NA+    V    + EA  ++R +  +   
Sbjct: 449 NALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL 508

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  + + ++ ACA + +L++G+  HCL +K   D      S++IDMY KCG +  A+  
Sbjct: 509 PDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDV 568

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  +   ++   NA++ GY   G   E  +LF ++   G+KP E+T+  +L  C  A ++
Sbjct: 569 FYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFML 627

Query: 596 REAR 599
              R
Sbjct: 628 NLGR 631



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 169/671 (25%), Positives = 303/671 (45%), Gaps = 62/671 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           Q++  + K G          LI  + K    R A R +FD   N D +++ ALI+G  R 
Sbjct: 163 QVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDA-RLVFDGALNLDTVSWTALIAGYVRD 221

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
                A+K+FDR++  G  PD  T  ++V A                             
Sbjct: 222 GFPMEAVKVFDRMQRVGHAPDQITLVTVVNA----------------------------- 252

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
              Y   G +  A   F    + + VA+  M+ G+   G  +++   F+E++  GL+   
Sbjct: 253 ---YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309

Query: 180 FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-M 235
            SL +VL A      +  G  +H    K G    V  ++ +A++N+Y +C  K+DA K +
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV--YVGSALVNMYAKC-SKMDAAKQV 366

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ + E ++V W+  +   A +G+  E    F  ++ +  Q +E+T  ++ S+      L
Sbjct: 367 FNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYL 426

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G Q+     K  F   + + NAL+ MY K G + +AR  F+ +   D+VSWN++I GY
Sbjct: 427 NFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGY 486

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            +  + ++A  MF  M+   ++P+  ++ASI+ A +N + LK+  Q H  ++K G     
Sbjct: 487 VQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTST 546

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH-AEALELYRTIWG 471
              S LI  Y KC  +  ++ V   +  +N V +NAL  +  Y   H  EA+ L++ I  
Sbjct: 547 CAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNAL--IAGYTMGHLEEAIHLFQEIQM 604

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIE 530
              +    TF+ +L  C     L  G+ IH   +K  +      V  +++ +Y       
Sbjct: 605 VGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFV 664

Query: 531 DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           D++  F ++     L  W A++ GYAQ   + +    +  M    + PD+  + +VL +C
Sbjct: 665 DSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRAC 724

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQ----LEHYAC--IVDLLGRVGLLEGAKMTIDQMPI 643
             AG+     + L    ++H LI      ++   C  ++D+  + G ++G+     +MP 
Sbjct: 725 --AGM-----SSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPR 777

Query: 644 PPDAHIWQSLL 654
             +   W S++
Sbjct: 778 RNNVISWNSMI 788



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 213/459 (46%), Gaps = 61/459 (13%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           IH   +K+G   G+   L N I++LYV+CG    A K F  + + DV +W+  ++   D 
Sbjct: 63  IHSKSLKIGV--GLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD- 119

Query: 258 VEAFGLFKD-------LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
               GLF         +  ++ + NE+T   +LS+  G + +  G+Q+    +K GF   
Sbjct: 120 ---HGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
                 LI MY KC  + DAR +FD  +  D+VSW ++IAGY  +GF  +A+ +F  M  
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
               P+  T+ +++ A                                   Y     L +
Sbjct: 237 VGHAPDQITLVTVVNA-----------------------------------YVALGRLAD 261

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           ++++ ++I   N V  N + S         EA+  +  +  +  +   S+   VL A A+
Sbjct: 262 ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIAS 321

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           ++ L  G  +H  A K   D +++V SA+++MY KC  ++ AK+ F  +   ++  WNAM
Sbjct: 322 LSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAM 381

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + G+AQ+G   EV   F+ M + G +PDE T+ ++ ++C        +  YL+    LH 
Sbjct: 382 LGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACA-------SLHYLNFGGQLHT 434

Query: 611 LIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPI 643
           ++ + +  +       +VD+  + G L+ A+   + M I
Sbjct: 435 VMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI 473



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 108/217 (49%)

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           ++L  A  +HS  +K G  L   + + ++  Y KC  ++ +++  S ++KK+    N++ 
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S+ +     A  ++ +  +W      N  TF++VL AC+ + D+  G+ +HC   K  + 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
              F +  +IDMY KC  + DA+  F          W A++ GY + G   E   +F++M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            + G  PD+IT + V+ +    G + +AR   + + +
Sbjct: 235 QRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPN 271



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 36/352 (10%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           + L   K I +   K+G      +GN ++ +Y KCG V+ A+  F  L  KD  +WNS++
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y ++G F   +  F  M    + PN +T A +L A S  + +    QVH  + K+GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                   LI  Y KC  L +++ V       + V   AL +  V      EA++++  +
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                                               +  +  D      V++ Y   G +
Sbjct: 235 -----------------------------------QRVGHAPDQITLVTVVNAYVALGRL 259

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA++ F +I   ++  WN M+ G+A+ G   E  + F ++ K G+K    +  +VL++ 
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
               ++    + +   +   GL   +   + +V++  +   ++ AK   + +
Sbjct: 320 ASLSMLNYG-SMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSL 370


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 223/769 (28%), Positives = 384/769 (49%), Gaps = 76/769 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ + K+G   + +L + LI  +    +   A +   D  + ++  +N +ISGL    
Sbjct: 31  KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKK 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
            +   L LF  +  + + PD  TF+S+++AC       Q  E +H   +  GF S   + 
Sbjct: 91  LASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVC 150

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+K+G +  A++ F      D+V++ AM+ G   NG  D++  +F +M    + 
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLD 231
              +  ++VL A   +   K GEQ+HGF VK G  S   VCN    A++ LY R G  + 
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN----ALVTLYSRWGNLIA 266

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F ++   D +S++  I+          A  LF+ ++ +  + +  T+ +LLS+   
Sbjct: 267 AEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACAS 326

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                 GKQ+ ++  K+G    + I  +L+ +Y KC  +  A   F     ++ V WN M
Sbjct: 327 VGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVM 386

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  Y + G  +++  +F  M    L+PN YT  SIL   ++  +L    Q+H+ +IKSGF
Sbjct: 387 LVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGF 446

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + S LI  Y K   L+ ++ +L  + +++ V   A+ +        AEAL+L++ 
Sbjct: 447 QFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQE 506

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-----VIDMY 523
           +       +   FS  + ACA +  L QG+ IH  +  + Y +D+ + +A     +I +Y
Sbjct: 507 MENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLY 566

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG+IEDAKR F ++   ++  WNAM+ GY+QHG   E  +LF +M + G+ P+ +T++
Sbjct: 567 SKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 626

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
                                     G +P                             I
Sbjct: 627 --------------------------GEMP-----------------------------I 631

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
            PDA IW++LLSACT++ NI++G  A   LLEL+P++ +TYVLLSN+YA +G W+   + 
Sbjct: 632 EPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRT 691

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           R+ MK++ + KEPG SWI V    H F+ GD  H  +++IY+ +  L E
Sbjct: 692 RQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNE 740


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 218/754 (28%), Positives = 392/754 (51%), Gaps = 14/754 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I    H DP+ ST LI  +++  D + +        + D   +  L+       
Sbjct: 19  QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A+ L+ ++  Q ++ +++TF S+++AC   G L   + VHG  +K GF     + +
Sbjct: 79  CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y + G + SA   F +    D V++++++   V NGE ++  + F  M S G   
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   +  V+ A  ++   +  +  HG+ +K G  +     ++++++ +Y +CG    A  
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIEND--RFVDSSLIFMYAKCGSLRSAEI 256

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ +T     +W+  I++   G    EA  LF  ++  + + N  TM  +L S     +
Sbjct: 257 VFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSL 316

Query: 292 LRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           LR GK +     K      +  +G  L+ +Y    + +    I   +  +    WN++I+
Sbjct: 317 LREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLIS 376

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y++ G   + +D+F  M +   +P+ +++AS L A  N   L+  +Q+H H+IK  F+ 
Sbjct: 377 VYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM- 435

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D+ + + LI  Y KC  ++ +  +  +++ K  V  N++ S L       +A+ L+  ++
Sbjct: 436 DEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMY 495

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +C E+    F  V++AC+ +  LE+GK IH   +     + IF+E+A++DMY KCG ++
Sbjct: 496 VTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQ 555

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A+R F  +   S+  W++++  Y  HG   EV  LF+KM + G+KP+++T + VL++C 
Sbjct: 556 TAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACS 615

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAG V+E   + + M D  G+ P+ EH+ CIVDLL R G L+ A   I  MP PP A IW
Sbjct: 616 HAGCVKEGMLFFNSMRDF-GIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIW 674

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL+ C I+  +D+      +L  +Q D+   Y LLSN+YA+ G WN+ G++R  MK  
Sbjct: 675 GALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGT 734

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            L K P YS + +G   + F AGD+S+ Q K  Y
Sbjct: 735 GLKKVPAYSVVELGKKAYRFGAGDASYPQLKYTY 768



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 146/306 (47%), Gaps = 16/306 (5%)

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           S +L+   Q+H+HII +    D    + LI +Y +   L  S  V       ++     L
Sbjct: 11  STTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVL 70

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
               V+  C+ EA+ LY  +     + N  TF  VL+AC+   DL  G+ +H   +K+ +
Sbjct: 71  LKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D D  V +A++ +Y + G ++ A++ F ++    L  W++++    ++G  +E  + F  
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRC 190

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEH----YACIVD 623
           M   G  PD +  L V+ +C   G++R A++        HG I +  +E+     + ++ 
Sbjct: 191 MVSEGGTPDSVLVLTVVEACGELGVLRLAKS-------AHGYILKRGIENDRFVDSSLIF 243

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNE 681
           +  + G L  A++  + +     +  W +++S+  + G +   L L    +  E++P++ 
Sbjct: 244 MYAKCGSLRSAEIVFENVTYRSTS-TWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSV 302

Query: 682 STYVLL 687
           +  ++L
Sbjct: 303 TMRIIL 308



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/161 (19%), Positives = 69/161 (42%), Gaps = 6/161 (3%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           + KA   +  L Q   +H   +      D    + +I+ Y + G ++ +   FR      
Sbjct: 7   LFKASTTLRTLAQ---LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPD 63

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG-LVREARTYL 602
              W  ++  +  +GCY E  +L+++M    ++ +  T+ +VL +C   G L    R + 
Sbjct: 64  SFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHG 123

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
             +     + P +     ++ + G +G L+ A+    +MP+
Sbjct: 124 RIIKSGFDMDPVVN--TALLSVYGELGYLDSARKVFGEMPL 162


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 214/735 (29%), Positives = 389/735 (52%), Gaps = 26/735 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           +++  +K G   D  L+  LIS +    D   + R LFD Q+ +D+++YN++IS   +  
Sbjct: 263 LHAFALKCGVLGDESLAPALISLYAALDDLSSS-RVLFDLQHVKDLVSYNSMISAYMQHG 321

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           +   +  +F ++   GL P+  T  S++  C     +   + VHG+ +K G + ++ +VS
Sbjct: 322 KWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVS 381

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+K GE+ SA+  F  C + +N+ + +++ GY+ N E++ + + F +M+   +  
Sbjct: 382 ALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAP 441

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMN----LYVRCGQKL 230
           +  ++  V+     +K+    + IH + V+  F       LN ++MN    +Y  CG+  
Sbjct: 442 DATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRF------ELNQSVMNALLAMYGDCGELS 495

Query: 231 DAVKMFDEITEPDVVSWSERIA--AACDGVEA-FGLFKDLRFNDFQINEYTMINLLSSVG 287
            + K+F ++    ++SW+  I+  A    +EA   LF  +R    Q +  T+I L+SS+ 
Sbjct: 496 SSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSIS 555

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                  G+ + +   K G    +S+ N LI+MY  CG V   + +FD L  +++VS+N 
Sbjct: 556 VAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNV 615

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           ++ GY +N    + L +F  M++    PN  T+ ++L    N +   Q   VH + I++ 
Sbjct: 616 LMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQNHQ---QGKSVHCYAIRNF 672

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             L+ S  +  I  Y + N ++ S ++ + + ++N +  NA+ S  V       A + +R
Sbjct: 673 STLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFR 732

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +     + +  T   ++ ACA + + + G+ +  L L+  +   + V +A+IDM+ +CG
Sbjct: 733 QMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCG 792

Query: 528 TIEDAKRAF-RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           ++  A+  F   + +DS+  W+AM+  Y+ HG       +F+ M   GVKPD+IT++ +L
Sbjct: 793 SLSFARELFDSSVVKDSVT-WSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIIL 851

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C H+G V +AR     +   HG+ P++EHYAC+VDLLGR G L+ A   +  M   P 
Sbjct: 852 SACSHSGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPS 911

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             + +SLL AC  +GN  +G   G+ L++ Q  N  +YV+LSN+YAS G WND   LR +
Sbjct: 912 ESLLESLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSNIYASVGKWNDYEWLRVD 971

Query: 707 MKEKFLCKEPGYSWI 721
           M+ K L K+ G S +
Sbjct: 972 MEAKGLRKDAGVSLV 986



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 168/702 (23%), Positives = 344/702 (49%), Gaps = 24/702 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +++  +++ GH  +  + T L+  + K A +  A R +FD    +D+I++NA+ISG +  
Sbjct: 161 EMHCRVLRTGHEGNVGVQTALLDMYAK-AGWIGASRTVFDFMGQKDLISWNAMISGYSLN 219

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                A++    ++  G+R +A T   +  ACG+  +++    +H   LK G      L 
Sbjct: 220 GSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLA 279

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I  YA   ++ S+ + F      D V+Y +M+  Y+ +G++ +S +VF +M   GL 
Sbjct: 280 PALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLG 339

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  ++ +VL      F V  G+ +HG  +K G    +   + +A++++Y + G+   A 
Sbjct: 340 PNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQI--SVVSALVSMYSKLGELDSAK 397

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD  TE + + W+  I+      E   A   F  ++  +   +  T+I ++      +
Sbjct: 398 HLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIK 457

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            LR  K I A+  +  F    S+ NAL++MYG CG+++ +  +F  +  +  +SWN++I+
Sbjct: 458 DLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIIS 517

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+E      ++ +F  M +  L  +  T+  ++ ++S ++       +HS  +KSG  +
Sbjct: 518 GYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNM 577

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D S+ + LIT Y  C ++   +R+   +  +N V  N L +     +   E L L+R + 
Sbjct: 578 DISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMV 637

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            + +E N  T   +L  C    + +QGK++HC A++     +    ++ I MY +   ++
Sbjct: 638 KNEQEPNHITVLNLLPVC---QNHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVD 694

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            + + F  +   ++  WNA++    Q        + F +M    +KPDE+T ++++++C 
Sbjct: 695 YSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACA 754

Query: 591 HAGL--VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
             G   + E  T L       G +  +     ++D+  R G L  A+   D   +  D+ 
Sbjct: 755 QLGNSDLGECVTALILQKGFGGTLLVVN---ALIDMHSRCGSLSFARELFDS-SVVKDSV 810

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
            W +++++ +++G+ +  L   S +++  ++PD+ +  ++LS
Sbjct: 811 TWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILS 852



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 259/519 (49%), Gaps = 11/519 (2%)

Query: 80  DAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D FTF  ++KAC +   L     +H   L+ G    V + +  ++ YAK+G I ++   F
Sbjct: 139 DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVF 198

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVK 193
                 D +++ AM+ GY  NG   ++ E   EM+  G+  N  +L  +    GA+ D  
Sbjct: 199 DFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSD 258

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G  +H F +K G L      L  A+++LY        +  +FD     D+VS++  I+A
Sbjct: 259 AGGSLHAFALKCGVLGD--ESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISA 316

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   E+F +F+ +       N  T+I++L +      +  G  +     K G  E 
Sbjct: 317 YMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQ 376

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           +S+ +AL+SMY K G+++ A+ +FD    K+++ WNS+I+GY  N  +N ALD FC M  
Sbjct: 377 ISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQI 436

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            ++ P+  T+  ++    + K L+ A  +H++ +++ F L+ S+++ L+  YG C  L+ 
Sbjct: 437 ENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSS 496

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S ++  +++ +  +  N + S          +++L+  +     + +  T   ++ + + 
Sbjct: 497 SYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISV 556

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
             D   G+++H LA+K+  + DI + + +I MY  CG++E  +R F  +   +   +N +
Sbjct: 557 AEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVL 616

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           M GY ++    E+  LF +M K   +P+ IT L +L  C
Sbjct: 617 MTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVC 655



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 177/389 (45%), Gaps = 7/389 (1%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAF-----GLFKDLRFND 271
            A+++ Y+  G+   A  +F          +S  +A  C     F      L++ L    
Sbjct: 78  TAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTL--CT 135

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F  + +T   ++ +      L  G+++     + G    V +  AL+ MY K G +  +R
Sbjct: 136 FGSDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASR 195

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           ++FD++  KD +SWN+MI+GYS NG   +A++    M +  +  N  T+  I  A   + 
Sbjct: 196 TVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAG 255

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
                  +H+  +K G L D+S+   LI+ Y   + L+ S+ +      K+ V  N++ S
Sbjct: 256 DSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMIS 315

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             +      E+ +++R +  +    N  T   VL  C+    +  G ++H + +K    +
Sbjct: 316 AYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAE 375

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            I V SA++ MY K G ++ AK  F      +   WN+++ GY  +  ++   + F KM 
Sbjct: 376 QISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQ 435

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREART 600
              V PD  T + V+  C H   +R A++
Sbjct: 436 IENVAPDATTVIKVIYGCRHIKDLRMAKS 464



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 17/209 (8%)

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKR----AFRKICRDSLAGWNAMMMGYAQHG 558
           LA+     +D  V +AV+D Y   G    A      A+R+  R ++   N  +  ++ HG
Sbjct: 64  LAVAGAIARDTSVVTAVVDRYLSFGRPASAASVFAGAYRR--RPTVYSLNLAVRCFSDHG 121

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
            + E+ +L+  +  FG   D  T+  V+ +C     +   R  + C     G    +   
Sbjct: 122 FHRELLDLYRTLCTFG--SDNFTFPPVIKACAAVSCLPLGRE-MHCRVLRTGHEGNVGVQ 178

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
             ++D+  + G +  ++   D M    D   W +++S  ++ G++   + A     E+Q 
Sbjct: 179 TALLDMYAKAGWIGASRTVFDFMG-QKDLISWNAMISGYSLNGSLREAVEATQ---EMQQ 234

Query: 679 D----NESTYVLLSNLYASAGMWNDVGKL 703
           D    N ST V ++    +AG  +  G L
Sbjct: 235 DGMRANASTLVCIAGACGAAGDSDAGGSL 263


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 218/754 (28%), Positives = 392/754 (51%), Gaps = 14/754 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I    H DP+ ST LI  +++  D + +        + D   +  L+       
Sbjct: 19  QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A+ L+ ++  Q ++ +++TF S+++AC   G L   + VHG  +K GF     + +
Sbjct: 79  CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y + G + SA   F +    D V++++++   V NGE ++  + F  M S G   
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   +  V+ A  ++   +  +  HG+ +K G  +     ++++++ +Y +CG    A  
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIEND--RFVDSSLIFMYAKCGSLRSAEI 256

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ +T     +W+  I++   G    EA  LF  ++  + + N  TM  +L S     +
Sbjct: 257 VFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSL 316

Query: 292 LRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           LR GK +     K      +  +G  L+ +Y    + +    I   +  +    WN++I+
Sbjct: 317 LREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLIS 376

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y++ G   + +D+F  M +   +P+ +++AS L A  N   L+  +Q+H H+IK  F+ 
Sbjct: 377 VYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM- 435

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D+ + + LI  Y KC  ++ +  +  +++ K  V  N++ S L       +A+ L+  ++
Sbjct: 436 DEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMY 495

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +C E+    F  V++AC+ +  LE+GK IH   +     + IF+E+A++DMY KCG ++
Sbjct: 496 VTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQ 555

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A+R F  +   S+  W++++  Y  HG   EV  LF+KM + G+KP+++T + VL++C 
Sbjct: 556 TAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACS 615

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAG V+E   + + M D  G+ P+ EH+ CIVDLL R G L+ A   I  MP PP A IW
Sbjct: 616 HAGCVKEGMLFFNSMRDF-GIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIW 674

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL+ C I+  +D+      +L  +Q D+   Y LLSN+YA+ G WN+ G++R  MK  
Sbjct: 675 GALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGT 734

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            L K P YS + +G   + F AGD+S+ Q K  Y
Sbjct: 735 GLKKVPAYSVVELGKKAYRFGAGDASYPQLKYTY 768



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 147/306 (48%), Gaps = 16/306 (5%)

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           S +L+Q  Q+H+HII +    D    + LI +Y +   L  S  V       ++     L
Sbjct: 11  STTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVL 70

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
               V+  C+ EA+ LY  +     + N  TF  VL+AC+   DL  G+ +H   +K+ +
Sbjct: 71  LKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D D  V +A++ +Y + G ++ A++ F ++    L  W++++    ++G  +E  + F  
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRC 190

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--LEH----YACIVD 623
           M   G  PD +  L V+ +C   G++R A++        HG I +  +E+     + ++ 
Sbjct: 191 MVSEGGTPDSVLVLTVVEACGELGVLRLAKS-------AHGYILKRGIENDRFVDSSLIF 243

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNE 681
           +  + G L  A++  + +     +  W +++S+  + G +   L L    +  E++P++ 
Sbjct: 244 MYAKCGSLRSAEIVFENVTYRSTS-TWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSV 302

Query: 682 STYVLL 687
           +  ++L
Sbjct: 303 TMRIIL 308



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           A T L Q   +H   +      D    + +I+ Y + G ++ +   FR         W  
Sbjct: 10  ASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGV 69

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG-LVREARTYLSCMSDL 608
           ++  +  +GCY E  +L+++M    ++ +  T+ +VL +C   G L    R +   +   
Sbjct: 70  LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSG 129

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
             + P +     ++ + G +G L+ A+    +MP+
Sbjct: 130 FDMDPVVN--TALLSVYGELGYLDSARKVFGEMPL 162


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 199/576 (34%), Positives = 319/576 (55%), Gaps = 41/576 (7%)

Query: 177 LNEFSLTA-VLGASFDVKEGEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVK 234
           L  F L A  L  + D+K  +++H     + +L+   N  L   +M  Y  CG+     K
Sbjct: 18  LTSFGLLAKALDQNPDIKTLKKLHTM---IFYLNSHQNPSLGIKLMRSYAACGEPGLTRK 74

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE+++ +VV ++  I +  +     +   +F+++    F+ + YT   +L +      
Sbjct: 75  VFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSEN 134

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR G  I     KVG    + +GN LI+MYGKCG + +AR +FD +I+KD VSWNSM+AG
Sbjct: 135 LRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAG 194

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ N  F+ AL++   M ++   P+G TMAS++ AV+N+ S +  + V            
Sbjct: 195 YAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS-ENVLYV------------ 241

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
                               +++   +++KN +  N +  V +  S   +A++LY  +  
Sbjct: 242 --------------------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEK 281

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              E +  TF+ VL AC  ++ L  G+ IH    K +   ++ +E+++IDMY +CG ++D
Sbjct: 282 CRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDD 341

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AKR F ++    +A W +++  Y   G       LF +M   G  PD I ++A+L++C H
Sbjct: 342 AKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSH 401

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           +GL+ E R Y   M+D + + P++EHYAC+VDLLGR G ++ A   I QMPI P+  +W 
Sbjct: 402 SGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWA 461

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LLS+C ++ N+D+G+LA   LL+L P+    YVLLSN+YA AG W +V ++R  MK K 
Sbjct: 462 TLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKK 521

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + K PG S + +    H F AGD+SH QSKEIY+EL
Sbjct: 522 IRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEEL 557



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/467 (22%), Positives = 208/467 (44%), Gaps = 43/467 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++++     H +P L   L+  +    +     +   +  +R+++ YN +I       
Sbjct: 39  KLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNH 98

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +    L +F  +   G RPD +T+  ++KAC    +L+   ++HG  LK+G    +++ +
Sbjct: 99  RYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGN 158

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I  Y K G +  A   F + +  D V++ +MV GY  N  FD + E+  EM   G + 
Sbjct: 159 GLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKP 218

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++ +++ A                      V N  +  +  LYV         K+F 
Sbjct: 219 DGCTMASLMPA----------------------VANTSSENV--LYVE--------KIFV 246

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   +++SW+  I          +A  L+  +     + +  T  ++L + G    L  
Sbjct: 247 NLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLL 306

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G++I  +  K      + + N+LI MY +CG ++DA+ +FD + F+D  SW S+I+ Y  
Sbjct: 307 GRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGM 366

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            G    A+ +F  ML     P+     +IL A S+S  L +  +++   +   + +   +
Sbjct: 367 TGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG-RIYFKQMTDDYRITPRI 425

Query: 415 --ISCLITTYGKCNALNESKRVLSE--IDKKNAVHINALASVLVYAS 457
              +CL+   G+   ++E+  ++ +  I+    V    L+S  V+ +
Sbjct: 426 EHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTN 472



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 160/357 (44%), Gaps = 25/357 (7%)

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
            C ++ F +     +   + +A+  +  +K   ++H+ I       + S+   L+ +Y  
Sbjct: 6   ICKIITFFIQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAA 65

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C     +++V  E+  +N V  N +    V    + + L ++R +       +  T+  V
Sbjct: 66  CGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCV 125

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           LKAC+   +L  G  IH   LK   D ++FV + +I MY KCG + +A+R F ++    +
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDV 185

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             WN+M+ GYA +  + +   +  +M  +G KPD  T  +++ +         A T    
Sbjct: 186 VSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAV--------ANTSSEN 237

Query: 605 MSDLHGLIPQLEHYACIV-DLLGRVGLLEGAK-------MTIDQMPIPPDAHIWQSLLSA 656
           +  +  +   LE    I  +++ RV +            + +++  + PDA  + S+L A
Sbjct: 238 VLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPA 297

Query: 657 CTIYGNIDLGLLAGSKLLE-LQPDNESTYVLLSN----LYASAGMWNDVGKLRKEMK 708
           C   G++   LL G ++ E ++       +LL N    +YA  G  +D  ++   MK
Sbjct: 298 C---GDLS-ALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMK 350


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 216/691 (31%), Positives = 367/691 (53%), Gaps = 48/691 (6%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH    KL  +  ++L +  I  Y K G + +A   F      + V+YTAM+ G+  +  
Sbjct: 112 VHASIFKL--AEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNR 169

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLN 216
             ++ E+F  MRS G+ELNEFS  A+L       D++ G Q+H   +K+GFL+     ++
Sbjct: 170 ERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN--YTFVS 227

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND-F 272
           NA+M LY +CG     +++FDE+   D+ SW+  I++    +    AF LF+D+R  D F
Sbjct: 228 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 287

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND--- 329
           +I+ +T+  +L +  G   +  G++I A   K+GF   +S+ NALI  Y KCG +     
Sbjct: 288 RIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 346

Query: 330 ----------------------------ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
                                       A  +FD +  ++S+S+N++++G+ +NG  ++A
Sbjct: 347 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKA 406

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L  FC M+E  +    +T+  +L A       K + Q+H  I+K GF  +  + + L+  
Sbjct: 407 LAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDM 466

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYA--SCHAEALELY-RTIWGSCREVNG 478
             +C  + +++++ S+     +  I   + +  YA  +   EA+ L+ ++       V+ 
Sbjct: 467 CTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDK 526

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              + VL  C  +   E GK IHC ALK+ +  D+ V +++I MY KC  ++DA + F  
Sbjct: 527 VASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNV 586

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH--AGLVR 596
           +    +  WN ++ G+  H    E  ++++KM K G+KPD +T++ ++++  H  + LV 
Sbjct: 587 MPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVD 646

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             R     M  ++ + P +EHY  +V +LG  GLLE A+  I++MPI P+A +W++LL A
Sbjct: 647 NCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDA 706

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+ N  +G  A   LL ++P + STY+L+SNLY++ G W+    +R+EM+ K   K P
Sbjct: 707 CRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHP 766

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           G SWI      H FYA D SH Q+K+I+  L
Sbjct: 767 GRSWIIHENKVHSFYARDKSHPQAKDIHSGL 797



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/582 (23%), Positives = 272/582 (46%), Gaps = 49/582 (8%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L+  LI  + K      A++        ++++Y A+ISG A+  +   A+++F R+R  G
Sbjct: 125 LANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSG 184

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +  + F+F +++  C  L + E+   +H + +K+GF +  ++ +  +  Y K G + S  
Sbjct: 185 IELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVL 244

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVLGASFDV 192
             F +    D  ++  ++   V    ++++ E+F +MR + G  ++ F+L+ +L A+  +
Sbjct: 245 QLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGL 304

Query: 193 KE--GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
               G +IH   +K+GF S +   + NA++  Y +CG     V +F+++   DV++W+E 
Sbjct: 305 ASMVGREIHAHVIKIGFESNIS--VINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEM 362

Query: 251 IAAAC----------------------------------DGVEAFGLFKDLRFNDFQINE 276
           I A                                    +G +A   F  +     ++ +
Sbjct: 363 ITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTD 422

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI--F 334
           +T+  +L++ G     +  KQI  F  K GF     I  AL+ M  +CG++ DA+ +   
Sbjct: 423 FTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQ 482

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH-MLEFSLIPNGYTMASILEAVSNSKSL 393
                  S+ W SMI GY+ N    +A+ +FC   LE +++ +     ++L         
Sbjct: 483 GSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFH 542

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +   Q+H H +KSGFL D  + + +IT Y KC+ ++++ +V + +   + V  N L +  
Sbjct: 543 EMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGH 602

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA-AMTDLEQGKAIHCLALKARYDQD 512
           +      EAL ++  +  +  + +  TF +++ A     ++L        L++K  Y  D
Sbjct: 603 LLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHID 662

Query: 513 IFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
             VE  ++++ +    G +E+A+    K+  +  A  W A++
Sbjct: 663 PTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALL 704



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 242/552 (43%), Gaps = 78/552 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++++IK G      +S  L+  + K        +   +  +RDI ++N +IS + +  
Sbjct: 210 QLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEM 269

Query: 61  QSGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQE--NEIVHGVCLKLGFSSRVYLVS 117
               A +LF D  R  G R D FT S+++ A   L       +H   +K+GF S + +++
Sbjct: 270 MYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVIN 329

Query: 118 GFIENYAKSGEI-----VSAEMCFRDCL---------------DL-----------DNVA 146
             I  Y K G I     +  +M  RD +               DL           ++++
Sbjct: 330 ALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSIS 389

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGV 203
           Y A++ G+  NGE  K+   F  M   G+EL +F+LT VL A     + K  +QIHGF +
Sbjct: 390 YNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFIL 449

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM--FDEITEPDVVSWSERI---AAACDGV 258
           K GF S  C  +  A++++  RCG+  DA KM      ++   + W+  I   A      
Sbjct: 450 KFGFGSNAC--IEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPE 507

Query: 259 EAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           EA  LF   +      +++     +L   G       GKQI     K GF+  + +GN++
Sbjct: 508 EAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSI 567

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I+MY KC  ++DA  +F+ +   D VSWN +IAG+  +   ++AL ++  M +  + P+ 
Sbjct: 568 ITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDT 627

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T   I+ A  ++ S                L+D+            C  L  S + +  
Sbjct: 628 VTFVLIISAYRHTNS---------------NLVDN------------CRRLFLSMKTIYH 660

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           ID     H  +L  VL Y     EA E+   +     E   S +  +L AC   ++   G
Sbjct: 661 ID-PTVEHYTSLVGVLGYWGLLEEAEEMINKM---PIEPEASVWRALLDACRIHSNTTIG 716

Query: 498 K--AIHCLALKA 507
           K  A H LA+K 
Sbjct: 717 KRAAKHLLAMKP 728


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 220/733 (30%), Positives = 372/733 (50%), Gaps = 26/733 (3%)

Query: 14  DPILSTTLISHFTKFA---DFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           D +L T +I+ +       D R AF  L   +++++  +NA+IS  +R       L++F 
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDAL---RSKNLFQWNAVISSYSRNELYHEVLEMFI 175

Query: 71  RLRYQG-LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKS 126
           ++  +  L PD FTF  ++KAC  + +  I   VHG+ +K G    +++ +  +  Y   
Sbjct: 176 KMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTH 235

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G +  A   F    + + V++ +M+  +  NG+         ++ ++       ++  V 
Sbjct: 236 GFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD---DGAFMPDVATV------VTVLPVC 286

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
               ++  G+ +HG+ VK+     +   +NNA+M++Y + G  +D+  +F      +VVS
Sbjct: 287 AREREIGVGKGVHGWAVKLSLDKELV--VNNALMDMYSKWGCIIDSQMIFKLNNNKNVVS 344

Query: 247 WSERIAAACDGVEAFGLFKDLR-----FNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           W+  +       +  G F  LR       D + +E T++N +     E +L + K++  +
Sbjct: 345 WNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCY 404

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K  F+    + NA ++ Y KCG ++ A+ +F  +  K   SWN++I GY+++     +
Sbjct: 405 SLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLS 464

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           LD    M    L+P+ +T+ S+L A S  KSL+   +VH  II++    D  +   +++ 
Sbjct: 465 LDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 524

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y  C  L   + +   ++  + V  N + +  +       AL L+R +     +  G + 
Sbjct: 525 YIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISM 584

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             V  AC+ +  L  G+  H  ALK   + + F+  ++IDMY K G I  + + F  +  
Sbjct: 585 MTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKE 644

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            S A WNAM+MGY  HG   E   LF +M + G  PD++T+L VLT+C H+GL+ E   Y
Sbjct: 645 KSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRY 704

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           L  M    GL P L+HYAC++D+LGR G L+ A     +M   PD  IW SLLS C I+ 
Sbjct: 705 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQ 764

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N+++G    +KL  L+P+    YVLLSNLYA  G W+DV ++R+ MKE  L K+ G SWI
Sbjct: 765 NLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWI 824

Query: 722 HVGGYTHHFYAGD 734
            + G    F  G+
Sbjct: 825 ELNGKVFSFVVGE 837



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 144/626 (23%), Positives = 291/626 (46%), Gaps = 41/626 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L++K G   D  +   L+S +        A +       R+++++N++I   +    
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD 268

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLV 116
            G  +            PD  T  +++  C   +E EI     VHG  +KL     + + 
Sbjct: 269 DGAFM------------PDVATVVTVLPVCA--REREIGVGKGVHGWAVKLSLDKELVVN 314

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR--SLG 174
           +  ++ Y+K G I+ ++M F+   + + V++  MV G+   G+   + ++  +M   S  
Sbjct: 315 NALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSED 374

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +E ++   +   FD   +   +++H + +K  F+      L NA +  Y +CG    
Sbjct: 375 VKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYD--ELLANAFVASYAKCGSLSY 432

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F  I    + SW+  I   A + D   +      ++ +    + +T+ +LLS+   
Sbjct: 433 AQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSK 492

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + LR GK++  F  +      + +  +++S+Y  CG++   + +FD +     VSWN++
Sbjct: 493 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTV 552

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I G+ +NGF  +AL +F  M+ + + P G +M ++  A S   SL+   + H++ +K   
Sbjct: 553 ITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKH-L 611

Query: 409 LLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           L D++ I+C +I  Y K  A+ +S +V + + +K+A   NA+           EA++L+ 
Sbjct: 612 LEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFE 671

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +  + R  +  TF  VL AC     L +G + +  +        ++   + VIDM  + 
Sbjct: 672 EMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 731

Query: 527 GTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           G +++A R   ++  +   G WN+++     H        +  K+  F ++P++     V
Sbjct: 732 GQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKL--FVLEPEKPENY-V 788

Query: 586 LTSCCHAGL-----VREARTYLSCMS 606
           L S  +AGL     VR+ R  +  MS
Sbjct: 789 LLSNLYAGLGKWDDVRQVRQRMKEMS 814



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              ++L+A     D+E G+ IH L +   R   D  + + +I MY  CG+ +D++ AF  
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSC 589
           +   +L  WNA++  Y+++  YHEV  +F KM SK  + PD  T+  V+ +C
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC 197


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 226/746 (30%), Positives = 371/746 (49%), Gaps = 64/746 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ ++++    D  LS  LI  + K      + R       RDI T+NA++    +  +
Sbjct: 27  IHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASE 86

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVK--ACGSLQENEI---VHGVCLKLGFSSRVYLV 116
              A  LF  +  + +       S+L +  ACG+L + E     HG+ +K+G  + +Y+ 
Sbjct: 87  LEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVG 146

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK   I  A   F D  + + V++TAM+ G   + + +++  +F  M    + 
Sbjct: 147 NALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIH 206

Query: 177 LNEFSLTAVLGA------------------SFDVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           ++  SL++VLG                   S DV  G+Q+H   +K GF S +  HLNN+
Sbjct: 207 VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDV-HGQQVHCLTIKHGFESDL--HLNNS 263

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQIN 275
           ++++Y + G    A  +F  + E  VVSW+  IA         +A    + ++++ F+ +
Sbjct: 264 LLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPD 323

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           E T +N+L +                C K G +E                     R +FD
Sbjct: 324 EITYVNMLVA----------------CIKSGDIEA-------------------GRQMFD 348

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +      SWN++++GYS+N    +A+ +F  M   S+ P+  T+A IL +++    L+ 
Sbjct: 349 GMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEG 408

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             QVH+   K+ F  D  + S LI  Y KC  +  +KR+   I + + V  N++ + L  
Sbjct: 409 GRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSL 468

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
            S   EA   ++ +       +  +++ VL  CA ++ L QG+ +H    +  Y  D FV
Sbjct: 469 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFV 528

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            SA+IDMY KCG ++ A+  F  +   +   WN M+ GYAQ+GC  E   L+  M   G 
Sbjct: 529 GSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE 588

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           KPD IT++AVLT+C H+GLV       + M   HG+ P ++HY CI+D LGR G L  A+
Sbjct: 589 KPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAE 648

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           + ID+MP   D  IW+ LLS+C +Y ++ L   A  +L  L P N + YVLL+N+Y+S G
Sbjct: 649 VLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLG 708

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWI 721
            W+D   +R+ M    + K+PGYSWI
Sbjct: 709 RWDDAKAVRELMSYNQVVKDPGYSWI 734



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 264/583 (45%), Gaps = 63/583 (10%)

Query: 84  FSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
            +SL++ C   + +   +++H   L+   S   +L +  IE YAK   I ++   F    
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLGLELNEFSLTAVLGASFDVKEG 195
             D   + A++  Y    E + +  +F EM      S    ++  +     GA  DV+ G
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECG 127

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
            + HG  +K+G  + +  ++ NA++ +Y +C    DA++ F ++ EP+ VS++  +    
Sbjct: 128 RRCHGISIKIGLDNNI--YVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLA 185

Query: 256 DG---VEAFGLFKDLRFNDFQINEYTMINLLS--SVGG---------ERILRA---GKQI 298
           D     EAF LF+ +  N   ++  ++ ++L   S GG           +L +   G+Q+
Sbjct: 186 DSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQV 245

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
                K GF   + + N+L+ MY K G ++ A  IF  +     VSWN MIAGY +    
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQS 305

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
           ++A++    M      P+  T  ++L A            + S  I++G  + D M S  
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLVAC-----------IKSGDIEAGRQMFDGMSSPS 354

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           ++++                        N + S       H EA++L+R +       + 
Sbjct: 355 LSSW------------------------NTILSGYSQNENHKEAVKLFREMQFRSVHPDR 390

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           +T +I+L + A M  LE G+ +H ++ KA +  DI++ S +I MY KCG +E AKR F +
Sbjct: 391 TTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDR 450

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           I    +  WN+MM G + +    E    F KM + G+ P + +Y  VL+ C     + + 
Sbjct: 451 IAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQG 510

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           R   S ++   G +      + ++D+  + G ++ A+   D M
Sbjct: 511 RQVHSQIAR-EGYMNDAFVGSALIDMYSKCGDVDAARWVFDMM 552



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 217/460 (47%), Gaps = 65/460 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L IK+G   D  L+ +L+  + K  +   A     +     ++++N +I+G  +  
Sbjct: 244 QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKS 303

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           QS  A++   R++Y G  PD  T+ +++ AC                             
Sbjct: 304 QSSKAIEYLQRMQYHGFEPDEITYVNMLVAC----------------------------- 334

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               KSG+I +    F         ++  ++ GY  N    ++ ++F EM+   +  +  
Sbjct: 335 ---IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRT 391

Query: 181 SLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L  +L +      ++ G Q+H    K  F + +  +L + ++ +Y +CG+   A ++FD
Sbjct: 392 TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI--YLASGLIGMYSKCGKVEMAKRIFD 449

Query: 238 EITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            I E D+V W+  +A     + D  EAF  FK +R      ++++   +LS       L 
Sbjct: 450 RIAELDIVCWNSMMAGLSLNSLDK-EAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 508

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q+ +   + G+M    +G+ALI MY KCG V+ AR +FD ++ K++V+WN MI GY+
Sbjct: 509 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYA 568

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG  ++A+ ++  M+     P+G T  ++L A S           HS ++ +G  + +S
Sbjct: 569 QNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACS-----------HSGLVDTGIKIFNS 617

Query: 414 M------------ISCLITTYGKCNALNESKRVLSEIDKK 441
           M             +C+I + G+   L+E++ ++ ++  K
Sbjct: 618 MQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCK 657



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E   +  + +L+ C        GK IH   L++R   D F+ + +I+ Y KC  I+ ++R
Sbjct: 2   ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRR 61

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            F ++ +  +  WNA++  Y +     +   LF +M +  +
Sbjct: 62  LFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI 102


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 205/693 (29%), Positives = 352/693 (50%), Gaps = 16/693 (2%)

Query: 78  RPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           +PD   F +L++ C S   +     VH      GF     +    I+ YA+ G +  A+ 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFD 191
            F      D  A+T M+  Y   G++D++  +F +M+   +   + +  A+L A   +  
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +K+G +IHG  ++ GF   V   +  A++N+Y +CG    A   F  +   DVVSW+  I
Sbjct: 121 LKDGMEIHGQILQQGFEGDV--FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 178

Query: 252 AAACDGVEAFGL----FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           AA C   + F L    ++ ++ +    N+ T+  + ++ G    L  GK +       G 
Sbjct: 179 AA-CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLV-SSGV 236

Query: 308 MEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           ME  V + N+ ++M+G  G + DAR +F+ ++ +D V+WN +I  Y +N  F +A+ +F 
Sbjct: 237 MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFG 296

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            + +  +  N  T   +L   ++  SL +   +H  + ++G+  D  + + L++ YG+C 
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCE 356

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           A  ++ ++  ++  K+ +    +           EAL+L++ +    R    +T   VL 
Sbjct: 357 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 416

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            CA +  L++G+ IH   ++ R+  ++ VE+A+I+MY KCG + +A   F K+ +  +  
Sbjct: 417 TCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILV 476

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN+M+  YAQHG Y E   LFN+M   GVK D +++++VL++  H+G V +   Y   M 
Sbjct: 477 WNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAML 536

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLL-EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
               + P  E Y C+VDLLGR G + E   + +      PD  +W +LL AC  +   D 
Sbjct: 537 QDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQ 596

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
              A  ++LE  P +   YV+LSN+YA+AG W+ V ++RK M+ + + KEPG S I +  
Sbjct: 597 AKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILN 656

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
             H F  GD SH +   IY EL  L   M A  
Sbjct: 657 RVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAG 689



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/453 (21%), Positives = 196/453 (43%), Gaps = 45/453 (9%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSL 87
             D RR F  + D   RD++T+N +I+   +    G A++LF RL+  G++ +  TF  +
Sbjct: 257 LGDARRLFEDMVD---RDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLM 313

Query: 88  VK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           +    +  SL + +++H +  + G+     + +  +  Y +      A   F D    D 
Sbjct: 314 LNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDV 373

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGF 201
           + +T M   Y  NG   ++ ++F EM+  G      +L AVL        +++G QIH  
Sbjct: 374 ITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSH 433

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV-- 258
            ++  F   +   +  A++N+Y +CG+  +A+ +F+++ + D++ W+  + A A  G   
Sbjct: 434 IIENRFRMEMV--VETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYD 491

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA-- 316
           E   LF  ++ +  + +  + +++LS++       +G     + Y V  ++  SI     
Sbjct: 492 ETLQLFNQMQLDGVKADAVSFVSVLSALS-----HSGSVTDGYQYFVAMLQDFSITPTPE 546

Query: 317 ----LISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
               ++ + G+ G++ +A  I   L     D + W +++     +   +QA      +LE
Sbjct: 547 LYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLE 606

Query: 371 --------FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG---------FLLDDS 413
                   + ++ N Y  A   + V+  + L ++  V     +S          FL  D 
Sbjct: 607 RDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDR 666

Query: 414 MISCLITTYGKCNALNESKRVLSEI-DKKNAVH 445
                   Y + + LN   R    I D K  +H
Sbjct: 667 SHPRRHPIYAELDVLNSEMRAAGYIPDTKMILH 699



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ L+ + G+  D +++T L+S + +     +A++   D  ++D+IT+  +    A+   
Sbjct: 329 IHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGF 388

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL+LF  ++ +G RP + T  +++  C    +LQ+   +H   ++  F   + + + 
Sbjct: 389 RKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETA 448

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y K G++  A   F      D + + +M+  Y  +G +D++ ++F +M+  G++ +
Sbjct: 449 LINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKAD 508

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             S  +VL A   S  V +G Q +   +   F       L   +++L  R G+  +AV +
Sbjct: 509 AVSFVSVLSALSHSGSVTDGYQ-YFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDI 567

Query: 236 FDEITE--PDVVSWSERIAA 253
             +++   PD + W   + A
Sbjct: 568 VLKLSGCLPDGILWMTLLGA 587



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 49/90 (54%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S +I+N   ++ ++ T LI+ + K      A         RDI+ +N+++   A+  
Sbjct: 429 QIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHG 488

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
                L+LF++++  G++ DA +F S++ A
Sbjct: 489 YYDETLQLFNQMQLDGVKADAVSFVSVLSA 518


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 216/691 (31%), Positives = 367/691 (53%), Gaps = 48/691 (6%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH    KL  +  ++L +  I  Y K G + +A   F      + V+YTAM+ G+  +  
Sbjct: 94  VHASIFKL--AEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNR 151

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLN 216
             ++ E+F  MRS G+ELNEFS  A+L       D++ G Q+H   +K+GFL+     ++
Sbjct: 152 ERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLN--YTFVS 209

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND-F 272
           NA+M LY +CG     +++FDE+   D+ SW+  I++    +    AF LF+D+R  D F
Sbjct: 210 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 269

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND--- 329
           +I+ +T+  +L +  G   +  G++I A   K+GF   +S+ NALI  Y KCG +     
Sbjct: 270 RIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 328

Query: 330 ----------------------------ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
                                       A  +FD +  ++S+S+N++++G+ +NG  ++A
Sbjct: 329 LFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKA 388

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L  FC M+E  +    +T+  +L A       K + Q+H  I+K GF  +  + + L+  
Sbjct: 389 LAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDM 448

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYA--SCHAEALELY-RTIWGSCREVNG 478
             +C  + +++++ S+     +  I   + +  YA  +   EA+ L+ ++       V+ 
Sbjct: 449 CTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDK 508

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              + VL  C  +   E GK IHC ALK+ +  D+ V +++I MY KC  ++DA + F  
Sbjct: 509 VASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNV 568

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH--AGLVR 596
           +    +  WN ++ G+  H    E  ++++KM K G+KPD +T++ ++++  H  + LV 
Sbjct: 569 MPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVD 628

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             R     M  ++ + P +EHY  +V +LG  GLLE A+  I++MPI P+A +W++LL A
Sbjct: 629 NCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDA 688

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+ N  +G  A   LL ++P + STY+L+SNLY++ G W+    +R+EM+ K   K P
Sbjct: 689 CRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHP 748

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           G SWI      H FYA D SH Q+K+I+  L
Sbjct: 749 GRSWIIHENKVHSFYARDKSHPQAKDIHSGL 779



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/582 (23%), Positives = 272/582 (46%), Gaps = 49/582 (8%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L+  LI  + K      A++        ++++Y A+ISG A+  +   A+++F R+R  G
Sbjct: 107 LANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSG 166

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +  + F+F +++  C  L + E+   +H + +K+GF +  ++ +  +  Y K G + S  
Sbjct: 167 IELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVL 226

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVLGASFDV 192
             F +    D  ++  ++   V    ++++ E+F +MR + G  ++ F+L+ +L A+  +
Sbjct: 227 QLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGL 286

Query: 193 KE--GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
               G +IH   +K+GF S +   + NA++  Y +CG     V +F+++   DV++W+E 
Sbjct: 287 ASMVGREIHAHVIKIGFESNIS--VINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEM 344

Query: 251 IAAAC----------------------------------DGVEAFGLFKDLRFNDFQINE 276
           I A                                    +G +A   F  +     ++ +
Sbjct: 345 ITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTD 404

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI--F 334
           +T+  +L++ G     +  KQI  F  K GF     I  AL+ M  +CG++ DA+ +   
Sbjct: 405 FTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQ 464

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH-MLEFSLIPNGYTMASILEAVSNSKSL 393
                  S+ W SMI GY+ N    +A+ +FC   LE +++ +     ++L         
Sbjct: 465 GSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFH 524

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +   Q+H H +KSGFL D  + + +IT Y KC+ ++++ +V + +   + V  N L +  
Sbjct: 525 EMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGH 584

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA-AMTDLEQGKAIHCLALKARYDQD 512
           +      EAL ++  +  +  + +  TF +++ A     ++L        L++K  Y  D
Sbjct: 585 LLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHID 644

Query: 513 IFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
             VE  ++++ +    G +E+A+    K+  +  A  W A++
Sbjct: 645 PTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALL 686



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 242/552 (43%), Gaps = 78/552 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++++IK G      +S  L+  + K        +   +  +RDI ++N +IS + +  
Sbjct: 192 QLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEM 251

Query: 61  QSGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQE--NEIVHGVCLKLGFSSRVYLVS 117
               A +LF D  R  G R D FT S+++ A   L       +H   +K+GF S + +++
Sbjct: 252 MYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVIN 311

Query: 118 GFIENYAKSGEI-----VSAEMCFRDCL---------------DL-----------DNVA 146
             I  Y K G I     +  +M  RD +               DL           ++++
Sbjct: 312 ALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSIS 371

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGV 203
           Y A++ G+  NGE  K+   F  M   G+EL +F+LT VL A     + K  +QIHGF +
Sbjct: 372 YNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFIL 431

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM--FDEITEPDVVSWSERI---AAACDGV 258
           K GF S  C  +  A++++  RCG+  DA KM      ++   + W+  I   A      
Sbjct: 432 KFGFGSNAC--IEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPE 489

Query: 259 EAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           EA  LF   +      +++     +L   G       GKQI     K GF+  + +GN++
Sbjct: 490 EAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSI 549

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I+MY KC  ++DA  +F+ +   D VSWN +IAG+  +   ++AL ++  M +  + P+ 
Sbjct: 550 ITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDT 609

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T   I+ A  ++ S                L+D+            C  L  S + +  
Sbjct: 610 VTFVLIISAYRHTNS---------------NLVDN------------CRRLFLSMKTIYH 642

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           ID     H  +L  VL Y     EA E+   +     E   S +  +L AC   ++   G
Sbjct: 643 ID-PTVEHYTSLVGVLGYWGLLEEAEEMINKM---PIEPEASVWRALLDACRIHSNTTIG 698

Query: 498 K--AIHCLALKA 507
           K  A H LA+K 
Sbjct: 699 KRAAKHLLAMKP 710


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 222/718 (30%), Positives = 364/718 (50%), Gaps = 12/718 (1%)

Query: 48  TYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL 107
           TY+   + L   C  G   +    L      PD   + +L + C   +  +     C + 
Sbjct: 63  TYSDRSAALRALCSHGQLAQALWLLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARA 122

Query: 108 GFSSRVY---LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
                 +   L +  +    + GEI  A   F    + D  ++  MV GY   G  +++ 
Sbjct: 123 DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEAL 182

Query: 165 EVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           +++  M   G+  + ++   VL   G   D + G ++H   ++ GF   V   + NA++ 
Sbjct: 183 DLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEV--DVLNALVT 240

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYT 278
           +Y +CG  + A K+FD +   D +SW+  IA   +  E      LF  +  N+ Q N  T
Sbjct: 241 MYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMT 300

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + ++  + G    +   K++  F  K GF   V+  N+LI MY   G++ DA  IF  + 
Sbjct: 301 ITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME 360

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            KD++SW +MI+GY +NGF ++AL+++  M   ++ P+  T+AS L A +    L   ++
Sbjct: 361 TKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIK 420

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H      GF+    + + L+  Y K   ++++  V   + +K+ V  +++ +   +   
Sbjct: 421 LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR 480

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             EAL  +R + G  +  N  TF   L ACAA   L  GK IH   L+     + +V +A
Sbjct: 481 SFEALYYFRYMLGHVKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA 539

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++D+Y KCG    A   F       +  WN M+ G+  HG      +LFN+M + G  PD
Sbjct: 540 LLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPD 599

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           E+T++A+L +C  AG+V +       M++   ++P L+HYAC+VDLL RVG L  A   I
Sbjct: 600 EVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLI 659

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
           ++MPI PDA +W +LL+ C I+ +++LG LA   +LEL+P++ + +VLL +LY  AG W 
Sbjct: 660 NRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWA 719

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            V ++RK M+EK L ++ G SW+ V G TH F   D SH Q KEI   L  +YE M A
Sbjct: 720 QVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKA 777



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 282/581 (48%), Gaps = 16/581 (2%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   ++S   +F +   A+R       RD+ ++N ++ G  +      AL L+ R+ + G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +RPD +TF  +++ CG + +  +   VH   L+ GF   V +++  +  YAK G+IV+A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F      D +++ AM+ G+  N E +   E+F+ M    ++ N  ++T+V  AS  + 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 194 E---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           E    +++HGF VK GF   V     N+++ +Y   G+  DA K+F  +   D +SW+  
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVA--FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 251 IAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G   +A  ++  +  ++   ++ T+ + L++      L  G ++       GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  V + NAL+ MY K   ++ A  +F ++  KD VSW+SMIAG+  N    +AL  F +
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN  T  + L A + + +L+   ++H+++++ G   +  + + L+  Y KC  
Sbjct: 491 MLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
            + +    S   +K+ V  N + S  V       AL L+  +       +  TF  +L A
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCA 609

Query: 488 CAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLA 545
           C+    + QG +  H +  K     ++   + ++D+  + G + +A     ++  +   A
Sbjct: 610 CSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAA 669

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
            W A++ G   H  + E+  L  K+    ++P+++ Y  +L
Sbjct: 670 VWGALLNGCRIHR-HVELGELAAKVI-LELEPNDVAYHVLL 708



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 165/369 (44%), Gaps = 28/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   +K G  +D     +LI  +T       A +     + +D +++ A+ISG  +  
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 61  QSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL+++  +    + PD  T     +     G L     +H +    GF   V + +
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL--GL 175
             +E YAKS  I  A   F+   + D V++++M+ G+ +N    +S E     R +   +
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFN---HRSFEALYYFRYMLGHV 495

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + N  +  A L    A+  ++ G++IH + ++ G   G   ++ NA+++LYV+CGQ   A
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI--GSEGYVPNALLDLYVKCGQTSYA 553

Query: 233 VKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F   +E DVVSW+  ++   A   G  A  LF  +       +E T + LL +    
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS-- 611

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNAL------ISMYGKCGQVNDARSIFDYLIFK-DS 342
              RAG  IQ +       E  SI   L      + +  + G++ +A ++ + +  K D+
Sbjct: 612 ---RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA 668

Query: 343 VSWNSMIAG 351
             W +++ G
Sbjct: 669 AVWGALLNG 677


>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 189/569 (33%), Positives = 302/569 (53%), Gaps = 41/569 (7%)

Query: 217  NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQ 273
            NA+++ + R G+  DA  +F  I +PD  S++  IAA      G +A      +  +DF 
Sbjct: 830  NALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFV 889

Query: 274  INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +N Y+  + LS+   E+  R G Q+ A   K    + V IG+AL+ MY KC    +AR +
Sbjct: 890  LNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRV 949

Query: 334  FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
            F+ +  ++ VSWNS+I  Y +NG   +AL +F  M++   +P+  T+AS++ A +   + 
Sbjct: 950  FEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAAD 1009

Query: 394  KQAMQVHSHIIKSGFLLDDSMIS--------------------------------CLITT 421
            ++  QVH+ ++KS    +D ++S                                 LIT 
Sbjct: 1010 REGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITG 1069

Query: 422  YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
            Y +   + +++ V S++ +KN +  N L +         EAL L+  +          T+
Sbjct: 1070 YARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTY 1129

Query: 482  SIVLKACAAMTDLEQGKAIHCLALKA--RYD----QDIFVESAVIDMYCKCGTIEDAKRA 535
              VL AC  + DL+ G+  H   LK   R+D     D+FV ++++DMY K G+I+D  + 
Sbjct: 1130 GNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 1189

Query: 536  FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
            F ++       WNAM++G+AQ+G   +  +LF +M      PD +T + VL++C H+GLV
Sbjct: 1190 FERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLV 1249

Query: 596  REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
             E R Y   M++ HG+IP  +HY C++DLLGR G L+  +  I +M + PDA +W SLL 
Sbjct: 1250 EEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLG 1309

Query: 656  ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
            +C ++ N+++G  A  KL EL P N   YVLLSN+YA  G W DV ++R  MK + + K+
Sbjct: 1310 SCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQ 1369

Query: 716  PGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            PG SWI +G     F A D+ H    EI+
Sbjct: 1370 PGCSWIEIGRKVSVFLARDNGHPCKNEIH 1398



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 172/613 (28%), Positives = 282/613 (46%), Gaps = 45/613 (7%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            +L +  IE+ A  G +  A   F D + L D  ++ A++      G   ++  +F  M 
Sbjct: 85  TFLFNRAIESLAACGSVADARELF-DLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMN 143

Query: 172 SLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           SLG+   + ++ +VL       D+    Q+HG   K  F S V   L  A++++Y  C  
Sbjct: 144 SLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVI--LGTALVDVYGNCFL 201

Query: 229 KLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA + FD+I EP+ +SW+    R   A  G  A  +F  +     +   YT+ + + +
Sbjct: 202 LADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLA 261

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-- 343
                 L  G+ I AF  + G+   V + ++++ MY KCG ++ A+S+F+    KD V  
Sbjct: 262 CRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMS 321

Query: 344 -----------------------------SWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
                                        SWN+M+ GY  +     AL +F  M + +  
Sbjct: 322 TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETRE 381

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            +  T+ S+L A +    + +  +VH+  IK GF     + + L+  Y KC  L  ++R+
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441

Query: 435 L--SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           L      ++++   N+L S     S    AL     +       N STFS  L ACA + 
Sbjct: 442 LLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTP-NQSTFSSALAACANIF 500

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L+QG  IH   ++  Y+ D  + S +IDMYCKC   + + R F       +  WN+M+ 
Sbjct: 501 LLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIF 560

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G A  G      +LF++M K G+K D +T+L  L SC   G VR  R+Y + M D   +I
Sbjct: 561 GCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD-ESII 619

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P++EHY C+++LLG+ G +   +  ++ MP  P   +W  +   C  YGN  LG  A   
Sbjct: 620 PRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKC 679

Query: 673 LLELQPDNESTYV 685
           + +  P     +V
Sbjct: 680 INDSNPLTPVQFV 692



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/621 (24%), Positives = 269/621 (43%), Gaps = 80/621 (12%)

Query: 36  RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS- 93
           R LFD    RD  ++NA+I+  +R      AL LF  +   G+RP   T +S++  C   
Sbjct: 105 RELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAEC 164

Query: 94  --LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
             L     +HG   K  F S V L +  ++ Y     +  A   F D L+ + +++  +V
Sbjct: 165 LDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIV 224

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFL 208
             Y   G  D + ++F  M S G+    ++++  + A  D   ++EG  IH F ++ G+ 
Sbjct: 225 RRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYE 284

Query: 209 SGVCNHLNNAIMNLYVRCG-----QKL--------------------------DAVKMFD 237
             V  H+ ++++++Y +CG     Q L                          DA ++F+
Sbjct: 285 HHV--HVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFE 342

Query: 238 EITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            + E ++VSW+  +     + D   A  LF+ +R    + +  T+ ++LS+  G   +  
Sbjct: 343 GMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGK 402

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS--IFDYLIFKDSVSWNSMIAGY 352
           G+++ AF  K GF     + NAL+ MY KCG +  A    +F+    +DS SWNS+I+GY
Sbjct: 403 GEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGY 462

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +     AL     M +  + PN  T +S L A +N   LKQ MQ+H+++I+ G+ +DD
Sbjct: 463 ERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDD 521

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S LI  Y KC   + S R+      ++ +  N++     Y+      L+L+  +   
Sbjct: 522 ILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQ 581

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + +  TF   L +C +   +  G++   L +    D+ I                   
Sbjct: 582 GIKADSVTFLGALVSCISEGHVRLGRSYFTLMM----DESIIPR---------------- 621

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
                      +  +  M+    +HGC  E+ +    M     +P    +L +   C   
Sbjct: 622 -----------IEHYECMIELLGKHGCMVELEDFVEHMP---FEPTTAMWLRIFDCCREY 667

Query: 593 GLVREARTYLSCMSDLHGLIP 613
           G  +       C++D + L P
Sbjct: 668 GNRKLGERAAKCINDSNPLTP 688



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 214/464 (46%), Gaps = 53/464 (11%)

Query: 23   SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAF 82
            +   + AD R  F  + D    D  +YNA+I+ LA+  +   AL     +       +A+
Sbjct: 837  ARLGRPADARALFHAIPDP---DQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAY 893

Query: 83   TFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
            +F+S + AC + +++     VH +  K   +  VY+ S  ++ YAK      A   F   
Sbjct: 894  SFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAM 953

Query: 140  LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGE 196
             + + V++ +++  Y  NG   ++  +FV M   G   +E +L +V+ A   +   +EG 
Sbjct: 954  PERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGR 1013

Query: 197  QIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKL------------------------- 230
            Q+H   VK   F   +   L+NA++++Y +CG+                           
Sbjct: 1014 QVHARVVKSDRFREDMV--LSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYA 1071

Query: 231  ------DAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMIN 281
                  DA  +F ++ E +V++W+  IAA A +G   EA  LF  L+        YT  N
Sbjct: 1072 RSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGN 1131

Query: 282  LLSSVGGERILRAGKQIQAFCYKVGFM------EVVSIGNALISMYGKCGQVNDARSIFD 335
            +L++ G    L+ G+Q      K GF         V +GN+L+ MY K G ++D   +F+
Sbjct: 1132 VLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 1191

Query: 336  YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
             +  +D+VSWN+MI G+++NG    AL +F  ML     P+  TM  +L A  +S  +++
Sbjct: 1192 RMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEE 1251

Query: 396  AMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
              +    + +  G +      +C+I   G+   L E + ++ E+
Sbjct: 1252 GRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEM 1295



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 214/481 (44%), Gaps = 75/481 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++  + K     + IL T L+  +      AD RRAF    D    + I++N ++    
Sbjct: 172 QLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFD---DILEPNAISWNVIVRRYH 228

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
                  A+ +F R+   G+RP  +T S  V AC    +L+E   +H   L+ G+   V+
Sbjct: 229 LAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVH 288

Query: 115 LVSGFIENYAKSG-------------------------------EIVSAEMCFRDCLDLD 143
           + S  ++ YAK G                                I  A+  F    + +
Sbjct: 289 VRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERN 348

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHG 200
            V++ AM+ GY+ + +   +  +F +MR    E +  +L +VL A     D+ +GE++H 
Sbjct: 349 LVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHA 408

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLDAVKMFDEITEPDVVSWSERIAAACDGV 258
           F +K GF S     L NA++ +Y +CG  +  + + +F+  +E D  SW+  I+    G 
Sbjct: 409 FAIKCGFFSSPI--LKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLIS----GY 462

Query: 259 EAFGLFKDLRF------NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
           E   + +   +      ++   N+ T  + L++     +L+ G QI A+  + G+     
Sbjct: 463 ERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDI 522

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + + LI MY KC Q + +  IF+    +D + WNSMI G + +G     LD+F  M +  
Sbjct: 523 LRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQG 582

Query: 373 LIPNGYT-MASILEAVSNSKSLKQAMQVHSHIIKSGF--LLDDSMIS------CLITTYG 423
           +  +  T + +++  +S           H  + +S F  ++D+S+I       C+I   G
Sbjct: 583 IKADSVTFLGALVSCISEG---------HVRLGRSYFTLMMDESIIPRIEHYECMIELLG 633

Query: 424 K 424
           K
Sbjct: 634 K 634



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 153/351 (43%), Gaps = 67/351 (19%)

Query: 304  KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
            K  F+    + N L+S Y + G++ DAR +FD +   ++ S+N++++ ++  G    A  
Sbjct: 788  KSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARA 847

Query: 364  MF---------------------------------CHMLEFSLIPNGYTMASILEAVSNS 390
            +F                                  H  +F L  N Y+ AS L A +  
Sbjct: 848  LFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVL--NAYSFASALSACAAE 905

Query: 391  KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            K  +  +QVH+ + KS    D  + S L+  Y KC    E++RV   + ++N V  N+L 
Sbjct: 906  KDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLI 965

Query: 451  SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RY 509
            +         EAL L+ ++  +    +  T + V+ ACA +    +G+ +H   +K+ R+
Sbjct: 966  TCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRF 1025

Query: 510  DQDIFVESAVIDMYCKCG-------------------------------TIEDAKRAFRK 538
             +D+ + +A++DMY KCG                                +EDA+  F +
Sbjct: 1026 REDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQ 1085

Query: 539  ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            +   ++  WN ++  YAQ+G   E   LF ++ +  V P   TY  VL +C
Sbjct: 1086 MVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNAC 1136



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 31/292 (10%)

Query: 381  ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
            A + + + ++ +L  A   H+  +KS F+ +  +++ L++ Y +   L +++RV  EI  
Sbjct: 764  APLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPH 823

Query: 441  KNAVHINALASVLVYASCHAEALELYRTIWGSCR-------------------------- 474
             N    NAL S        A+A  L+  I    +                          
Sbjct: 824  PNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAM 883

Query: 475  -----EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  +N  +F+  L ACAA  D   G  +H L  K+ + +D+++ SA++DMY KC   
Sbjct: 884  HADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWP 943

Query: 530  EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            E+A+R F  +   ++  WN+++  Y Q+G   E   LF  M K G  PDE+T  +V+++C
Sbjct: 944  EEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSAC 1003

Query: 590  CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
                  RE R   + +         +     +VD+  + G    A+   D+M
Sbjct: 1004 AGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRM 1055



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 171/398 (42%), Gaps = 51/398 (12%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            Q+++L+ K+ H  D  + + L+  + K      A R       R+I+++N+LI+   +  
Sbjct: 913  QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLG--------- 108
              G AL LF  +   G  PD  T +S++ AC  L   +E   VH   +K           
Sbjct: 973  PVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLS 1032

Query: 109  -----------------------FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
                                    S  V   +  I  YA+S  +  A+M F   ++ + +
Sbjct: 1033 NALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVI 1092

Query: 146  AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIH--- 199
            A+  ++  Y  NGE +++  +FV ++   +    ++   VL   G   D++ G+Q H   
Sbjct: 1093 AWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHV 1152

Query: 200  ---GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AA 253
               GF    G  S V   + N+++++Y++ G   D  K+F+ +   D VSW+  I   A 
Sbjct: 1153 LKEGFRFDFGPESDV--FVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQ 1210

Query: 254  ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVS 312
                 +A  LF+ +  +    +  TMI +LS+ G   ++  G++  ++     G +    
Sbjct: 1211 NGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQD 1270

Query: 313  IGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
                +I + G+ G + +   +   +  + D+V W S++
Sbjct: 1271 HYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLL 1308



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 167/345 (48%), Gaps = 20/345 (5%)

Query: 14  DPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           D ++ST+++S      + AD +R F  +   + R+++++NA+++G  R      AL LF 
Sbjct: 317 DMVMSTSIVSGLASCGRIADAKRVFEGM---KERNLVSWNAMLTGYIRSMDLTGALLLFQ 373

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           ++R +    DA T  S++ AC  + +    E VH   +K GF S   L +  +  Y+K G
Sbjct: 374 QMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCG 433

Query: 128 EIVSAE--MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            + SAE  + F    + D+ ++ +++ GY  +   + +     +M+S  +  N+ + ++ 
Sbjct: 434 CLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTFSSA 492

Query: 186 LGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L A    F +K+G QIH + ++ G+   + + L + ++++Y +C Q   ++++F+     
Sbjct: 493 LAACANIFLLKQGMQIHAYMIRKGY--EIDDILRSVLIDMYCKCRQFDYSIRIFEARPSR 550

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           DV+ W+  I   A +  G     LF +++    + +  T +  L S   E  +R G+   
Sbjct: 551 DVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYF 610

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                   +  +     +I + GK G + +     +++ F+ + +
Sbjct: 611 TLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTA 655



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-------IHCLALKARYDQDIFVESAVI 520
            IW      +   F   L+A A + DL +           H  ALK+ +  + F+ + ++
Sbjct: 743 AIWYGMARHHHHHFVSHLRASAPLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLV 802

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
             Y + G + DA+R F +I   +   +NA++  +A+ G   +   LF+ +      PD+ 
Sbjct: 803 SAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP----DPDQC 858

Query: 581 TYLAVLTSCCHAGLVREARTYLSCM 605
           +Y AV+ +        +A  +L+ M
Sbjct: 859 SYNAVIAALAQHSRGADALLFLAAM 883


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 193/571 (33%), Positives = 310/571 (54%), Gaps = 17/571 (2%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G Q+HG   K+GF  G    L N ++++Y +CG+   A ++F  + + +VVSW+  +
Sbjct: 233 LRGGVQLHGALTKLGF--GSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALM 290

Query: 252 AAACDGVEAFG---LFKDLRF-NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
                  +A G   L  ++R  ++   NEYT+   L +      + AG  I   C + G+
Sbjct: 291 VGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGY 350

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFC 366
            E   + ++L+ +Y K G++ DAR +FD   + +   +WN+MI+GY+  G    AL +F 
Sbjct: 351 EEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFR 410

Query: 367 HML------EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCL 418
            M       E    P+ +T AS+L+A     + ++  QVH+ +  SGF    + I    L
Sbjct: 411 EMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGAL 470

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC  L  + +V   +++KNA+    +           EALEL+R  W S    + 
Sbjct: 471 VDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADA 530

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              S ++   A    +EQG+ +HC  +K+    D+   ++++DMY KCG  ++A+R FR+
Sbjct: 531 HVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFRE 590

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           I   ++  W  M+ G  +HG   E   +F +M   GV+PDE+TYLA+L++C HAGLV E 
Sbjct: 591 IPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC 650

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           R Y SC+     + P+ EHYAC+VDLLGR G L  A+  I  MP+ P   +WQ+LLSAC 
Sbjct: 651 RRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACR 710

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ ++ +G  AG  LL +  DN   YV LSN++A AG W +  K+R  M+ + L K+ G 
Sbjct: 711 VHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGC 770

Query: 719 SWIHVGGYTHHFYAG--DSSHSQSKEIYKEL 747
           SW+ +G   H FY G  + +H Q+ +I + L
Sbjct: 771 SWVEIGKEVHFFYGGGDEEAHPQAGDIRRVL 801



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 236/482 (48%), Gaps = 30/482 (6%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL+    +HG   KLGF S   L +  I+ YAK GE+  A   F    D + V++TA++ 
Sbjct: 232 SLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMV 291

Query: 153 GYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFL 208
           G++ +G+      +  EMR+      NE++L+A L A   + D+  G  IHG  V+ G+ 
Sbjct: 292 GFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYE 351

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFD-EITEPDVVSWSERI---AAACDGVEAFGLF 264
                 + ++++ LY + G+  DA ++FD       + +W+  I   A A  G +A  +F
Sbjct: 352 EHYV--VASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVF 409

Query: 265 KDLRF------NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS--IGNA 316
           +++R       +  Q +E+T  +LL + GG    R G Q+ A     GF    +  +  A
Sbjct: 410 REMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGA 469

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L+ MY KCG++  A  +F+ L  K+++ W +++ G+++ G   +AL++F          +
Sbjct: 470 LVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARAD 529

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            + ++SI+  +++   ++Q  QVH + +KS    D S  + ++  Y KC   +E++R+  
Sbjct: 530 AHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFR 589

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDL 494
           EI  +N V    + + L       EA+ ++  +     E +  T+  +L AC  A + D 
Sbjct: 590 EIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVD- 648

Query: 495 EQGKAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG-WNA 549
           E  +   C+    R D+ +  ++     ++D+  + G + +A+   R +  +   G W  
Sbjct: 649 ECRRYFSCI----RRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQT 704

Query: 550 MM 551
           ++
Sbjct: 705 LL 706



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 182/370 (49%), Gaps = 24/370 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARF 59
           I+ L ++ G+    +++++L+  ++K      A R +FD     R + T+NA+ISG A  
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARR-VFDCAGLGRGLATWNAMISGYAHA 399

Query: 60  CQSGPALKLFDRLRYQGL------RPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFS 110
                AL +F  +R +        +PD FTF+SL+KACG L   +E   VH      GFS
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 111 --SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
             S   L    ++ Y K G +  A   F      + + +T +V G+   G+  ++ E+F 
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519

Query: 169 EMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
                G   +   L++++G   D   V++G Q+H +GVK    +G      N+I+++Y++
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKS--PAGTDVSAGNSIVDMYLK 577

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINL 282
           CG   +A +MF EI   +VVSW+  I        G EA  +F+++R    + +E T + L
Sbjct: 578 CGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLAL 637

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFKD 341
           LS+     ++   ++  +   +   +   +   A ++ + G+ G++ +AR +   +  + 
Sbjct: 638 LSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEP 697

Query: 342 SVS-WNSMIA 350
           +V  W ++++
Sbjct: 698 TVGVWQTLLS 707



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 113/240 (47%), Gaps = 18/240 (7%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +A +L A +   SL+  +Q+H  + K GF  D  + + LI  Y KC  L+ +  V   + 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-----NGSTFSIVLKACAAMTDL 494
            +N V   AL   +V    H +A    R + G  R       N  T S  LKAC    D+
Sbjct: 280 DRNVVSWTAL---MVGFLQHGDATGCLRLL-GEMRAASEAAPNEYTLSASLKACCVTEDM 335

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF--RKICRDSLAGWNAMMM 552
             G  IH L ++  Y++   V S+++ +Y K G I DA+R F    + R  LA WNAM+ 
Sbjct: 336 GAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGR-GLATWNAMIS 394

Query: 553 GYAQHGCYHEVSNLFNKMSKFGV------KPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           GYA  G   +   +F +M +         +PDE T+ ++L +C   G  RE     + M+
Sbjct: 395 GYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMA 454



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 14/180 (7%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L+A A  + L  G  +H    K  +  D  + + +IDMY KCG ++ A   F  +   +
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN 282

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYL 602
           +  W A+M+G+ QHG       L  +M       P+E T  A L +CC    V E    +
Sbjct: 283 VVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACC----VTED---M 335

Query: 603 SCMSDLHGLIPQL---EHY---ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
                +HGL  +    EHY   + +V L  + G +  A+   D   +      W +++S 
Sbjct: 336 GAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISG 395



 Score = 42.7 bits (99), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 20/91 (21%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   +K+    D     +++  + K      A R   +   R+++++  +I+GL +  
Sbjct: 551 QVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHG 610

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A+ +F+ +R  G+ PD  T+ +L+ AC
Sbjct: 611 LGREAVAMFEEMRAGGVEPDEVTYLALLSAC 641


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 192/583 (32%), Positives = 319/583 (54%), Gaps = 11/583 (1%)

Query: 181 SLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           + TA+L    A  D+  G  +H      G  S      + A+ N+Y +C +  DA ++FD
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESI--ASTALANMYFKCRRPADARRVFD 75

Query: 238 EITEPDVVSWSERIAA-ACDGVEAFGLFKDLRFNDFQINE----YTMINLLSSVGGERIL 292
            +   D V+W+  +A  A +G+ +  +   +R    +  E     T++++L +    R L
Sbjct: 76  RMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
            A +++ AF  + G  E+V++  A++  Y KCG V  AR++FD +  ++SVSWN+MI GY
Sbjct: 136 HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           ++NG   +A+ +F  M++  +     ++ + L+A      L +  +VH  +++ G   + 
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255

Query: 413 SMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           S+ + LITTY KC   + + +V +E+ +KK  +  NA+        C  +A  L+  +  
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                +  T   V+ A A ++D  Q + IH  +++ + DQD++V +A+IDMY KCG +  
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+R F       +  WNAM+ GY  HG       LF +M   G  P+E T+L+VL +C H
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV E + Y + M   +GL P +EHY  +VDLLGR G L+ A   I  MPI P   ++ 
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYG 495

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           ++L AC ++ N++L   +   + EL P+    +VLL+N+YA+A MW DV ++R  M++K 
Sbjct: 496 AMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKG 555

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           L K PG+S I +    H FY+G ++H  +K+IY  L KL E +
Sbjct: 556 LQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEI 598



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 222/448 (49%), Gaps = 25/448 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           +++ L   G   + I ST L + + K    AD RR F  +    +RD + +NA+++G AR
Sbjct: 38  VHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM---PSRDRVAWNAVVAGYAR 94

Query: 59  FCQSGPALKLFDRLRYQ--GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
                 A++   R++ +  G RPD+ T  S++ AC    +L     VH   L+ G    V
Sbjct: 95  NGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELV 154

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            + +  ++ Y K G + +A   F DC+ + N V++ AM+ GY  NG   ++  +F  M  
Sbjct: 155 NVSTAVLDAYCKCGAVEAARAVF-DCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQ 213

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+++ + S+ A L A  +   + E  ++H   V+VG  S V   + NA++  Y +C + 
Sbjct: 214 EGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS--VTNALITTYAKCKRA 271

Query: 230 LDAVKMFDEI-TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSS 285
             A ++F+E+  +   +SW+  I          +A  LF  ++  + + + +T+++++ +
Sbjct: 272 DLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPA 331

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           V         + I  +  +    + V +  ALI MY KCG+V+ AR +FD    +  ++W
Sbjct: 332 VADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITW 391

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N+MI GY  +GF   A+++F  M     +PN  T  S+L A S++  + +  Q +   +K
Sbjct: 392 NAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEG-QKYFASMK 450

Query: 406 SGFLLDDSM--ISCLITTYGKCNALNES 431
             + L+  M     ++   G+   L+E+
Sbjct: 451 KDYGLEPGMEHYGTMVDLLGRAGKLDEA 478



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK--FADFR-RAFRFLFDTQNRDIITYNALISGLA 57
           +++ LL++ G   +  ++  LI+ + K   AD   + F  L + + R  I++NA+I G  
Sbjct: 241 RVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTR--ISWNAMILGFT 298

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVY 114
           +      A +LF R++ + +RPD+FT  S++ A   + +      +HG  ++      VY
Sbjct: 299 QNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVY 358

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +++  I+ Y+K G +  A   F    D   + + AM+ GY  +G    + E+F EM+  G
Sbjct: 359 VLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTG 418

Query: 175 LELNEFSLTAVLGA 188
              NE +  +VL A
Sbjct: 419 SLPNETTFLSVLAA 432


>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
 gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
          Length = 590

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 174/463 (37%), Positives = 267/463 (57%), Gaps = 1/463 (0%)

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L  G+Q+ A      +   V +G  L++MY +CG ++DAR++ D +  +  VSW +M
Sbjct: 23  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 82

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GYS+     +ALD+F  ML    IPN YT+A++L + S  +S+ Q  QVHS ++K+ F
Sbjct: 83  ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNF 142

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + S L+  Y K   + E++RV   + +++ V   A+ S         EAL+L+R 
Sbjct: 143 ESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 202

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++    + N  TF+ ++ A + +  L+ GK +H L L+      + +++++IDMY KCG 
Sbjct: 203 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGK 262

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  ++R F  +   S+  WNAM+MGY +HG  HEV +LF  + K  VKPD +T LAVL+ 
Sbjct: 263 LLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSG 321

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV E       +      +    HY CI+DLLGR G LE A   I+ MP      
Sbjct: 322 CSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 381

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW SLL AC ++ N+ +G L   KLLE++P+N   YV+LSN+YA+AGMW DV K+RK M 
Sbjct: 382 IWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLML 441

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           EK + KEPG SWI +    H F++ +  H   K+I  ++ +++
Sbjct: 442 EKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIF 484



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 14/376 (3%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           EG Q+H   +   +   V   L   ++ +YVRCG   DA  + D + E  VVSW+  I+ 
Sbjct: 28  EGRQVHARMITARYRPAV--FLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISG 85

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                  VEA  LF  +       NEYT+  +L+S  G + +  GKQ+ +   K  F   
Sbjct: 86  YSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESH 145

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + +G++L+ MY K   + +AR +FD L  +D VS  ++I+GY++ G   +ALD+F  +  
Sbjct: 146 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 205

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             +  N  T  +++ A+S   SL    QVH+ I++       ++ + LI  Y KC  L  
Sbjct: 206 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 265

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S+RV   + +++ V  NA+           E + L++ +    +  +  T   VL  C+ 
Sbjct: 266 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKP-DSVTLLAVLSGCSH 324

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG 546
              +++G  I    +K   +Q   + +     +ID+  + G +E A      +  +S   
Sbjct: 325 GGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 381

Query: 547 -WNAMMMGYAQHGCYH 561
            W +++     H   H
Sbjct: 382 IWGSLLGACRVHANVH 397



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 189/392 (48%), Gaps = 15/392 (3%)

Query: 84  FSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           + + + AC    +L E   VH   +   +   V+L +  +  Y + G +  A        
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQ 197
           +   V++T M+ GY       ++ ++F++M   G   NE++L  VL        + +G+Q
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACD 256
           +H   VK  F S +   + ++++++Y +     +A ++FD + E DVVS +  I+  A  
Sbjct: 133 VHSLLVKTNFESHM--FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190

Query: 257 GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           G+  EA  LF+ L     Q N  T   L++++ G   L  GKQ+ A   +      V++ 
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQ 250

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+LI MY KCG++  +R +FD ++ +  VSWN+M+ GY  +G  ++ + +F   L   + 
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVK 309

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKR 433
           P+  T+ ++L   S+   + + + +   ++K    LL      C+I   G+   L ++  
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369

Query: 434 VLSEIDKKNAVHI--NALASVLVYASCHAEAL 463
           ++  +  ++   I  + L +  V+A+ H   L
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGEL 401



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 180/372 (48%), Gaps = 34/372 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I   +     L T L++ + +      A   L     R ++++  +ISG ++  
Sbjct: 31  QVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTE 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL LF ++   G  P+ +T ++++ +C    S+ + + VH + +K  F S +++ S
Sbjct: 91  RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGS 150

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKS  I  A   F    + D V+ TA++ GY   G  +++ ++F ++ S G++ 
Sbjct: 151 SLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQC 210

Query: 178 NEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           N  + T ++      AS D   G+Q+H   ++      V   L N+++++Y +CG+ L +
Sbjct: 211 NHVTFTTLVTALSGLASLDY--GKQVHALILRKELPFFVA--LQNSLIDMYSKCGKLLYS 266

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD + E  VVSW+  +        G E   LFKDL   + + +  T++ +LS     
Sbjct: 267 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHG 325

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNAL---------ISMYGKCGQVNDARSIFDYLIFK 340
            ++  G  I        F  VV   +AL         I + G+ G++  A ++ + + F+
Sbjct: 326 GLVDEGLDI--------FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 377

Query: 341 DSVS-WNSMIAG 351
            + S W S++  
Sbjct: 378 STPSIWGSLLGA 389



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 59/109 (54%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +   + AC     L +G+ +H   + ARY   +F+ + ++ MY +CG ++DA+    ++ 
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             S+  W  M+ GY+Q   + E  +LF KM + G  P+E T   VLTSC
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSC 121


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 222/718 (30%), Positives = 364/718 (50%), Gaps = 12/718 (1%)

Query: 48  TYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL 107
           TY+   + L   C  G   +    L      PD   + +L + C   +  +     C + 
Sbjct: 63  TYSDRSAALRALCSHGQLAQALWLLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARA 122

Query: 108 GFSSRVY---LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
                 +   L +  +    + GEI  A   F    + D  ++  MV GY   G  +++ 
Sbjct: 123 DAEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEAL 182

Query: 165 EVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           +++  M   G+  + ++   VL   G   D + G ++H   ++ GF   V   + NA++ 
Sbjct: 183 DLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEV--DVLNALVT 240

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYT 278
           +Y +CG  + A K+FD +   D +SW+  IA   +  E      LF  +  N+ Q N  T
Sbjct: 241 MYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMT 300

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + ++  + G    +   K++  F  K GF   V+  N+LI MY   G++ DA  IF  + 
Sbjct: 301 ITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME 360

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            KD++SW +MI+GY +NGF ++AL+++  M   ++ P+  T+AS L A +    L   ++
Sbjct: 361 TKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIK 420

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H      GF+    + + L+  Y K   ++++  V   + +K+ V  +++ +   +   
Sbjct: 421 LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR 480

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             EAL  +R + G  +  N  TF   L ACAA   L  GK IH   L+     + +V +A
Sbjct: 481 SFEALYYFRYMLGHVKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA 539

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++D+Y KCG    A   F       +  WN M+ G+  HG      +LFN+M + G  PD
Sbjct: 540 LLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPD 599

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           E+T++A+L +C  AG+V +       M++   ++P L+HYAC+VDLL RVG L  A   I
Sbjct: 600 EVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLI 659

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
           ++MPI PDA +W +LL+ C I+ +++LG LA   +LEL+P++ + +VLL +LY  AG W 
Sbjct: 660 NRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWA 719

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            V ++RK M+EK L ++ G SW+ V G TH F   D SH Q KEI   L  +YE M A
Sbjct: 720 QVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKA 777



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 282/581 (48%), Gaps = 16/581 (2%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   ++S   +F +   A+R       RD+ ++N ++ G  +      AL L+ R+ + G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +RPD +TF  +++ CG + +  +   VH   L+ GF   V +++  +  YAK G+IV+A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F      D +++ AM+ G+  N E +   E+F+ M    ++ N  ++T+V  AS  + 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 194 E---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           E    +++HGF VK GF   V     N+++ +Y   G+  DA K+F  +   D +SW+  
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVA--FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 251 IAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G   +A  ++  +  ++   ++ T+ + L++      L  G ++       GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  V + NAL+ MY K   ++ A  +F ++  KD VSW+SMIAG+  N    +AL  F +
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRY 490

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN  T  + L A + + +L+   ++H+++++ G   +  + + L+  Y KC  
Sbjct: 491 MLG-HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 549

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
            + +    S   +K+ V  N + S  V       AL L+  +       +  TF  +L A
Sbjct: 550 TSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCA 609

Query: 488 CAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLA 545
           C+    + QG +  H +  K     ++   + ++D+  + G + +A     ++  +   A
Sbjct: 610 CSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAA 669

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
            W A++ G   H  + E+  L  K+    ++P+++ Y  +L
Sbjct: 670 VWGALLNGCRIHR-HVELGELAAKVI-LELEPNDVAYHVLL 708



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 165/369 (44%), Gaps = 28/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   +K G  +D     +LI  +T       A +     + +D +++ A+ISG  +  
Sbjct: 319 EMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNG 378

Query: 61  QSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL+++  +    + PD  T     +     G L     +H +    GF   V + +
Sbjct: 379 FPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN 438

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL--GL 175
             +E YAKS  I  A   F+   + D V++++M+ G+ +N    +S E     R +   +
Sbjct: 439 ALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFN---HRSFEALYYFRYMLGHV 495

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + N  +  A L    A+  ++ G++IH + ++ G   G   ++ NA+++LYV+CGQ   A
Sbjct: 496 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI--GSEGYVPNALLDLYVKCGQTSYA 553

Query: 233 VKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F   +E DVVSW+  ++   A   G  A  LF  +       +E T + LL +    
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS-- 611

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNAL------ISMYGKCGQVNDARSIFDYLIFK-DS 342
              RAG  IQ +       E  SI   L      + +  + G++ +A ++ + +  K D+
Sbjct: 612 ---RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA 668

Query: 343 VSWNSMIAG 351
             W +++ G
Sbjct: 669 AVWGALLNG 677


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 382/736 (51%), Gaps = 15/736 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  + + GH  D I   T+++ +        A +      N +++ +N +ISG A+  
Sbjct: 229 KVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRG 288

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
            +  A+  F  L+  GL+    +  S++ A  SL       +VH    K G    VY+ S
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGS 348

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK  ++ +A+  F    + + V + AM+ G+  NG   +  E F  M+  G + 
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQP 408

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+ T++  A   +     G Q+H   +K  F S +   + NA++++Y + G   +A K
Sbjct: 409 DEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNL--FVANALVDMYAKSGALKEARK 466

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F+ +   D VSW+  I          EAF +F+ +  N    +E ++ +++S+    + 
Sbjct: 467 QFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE 526

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ G+Q      KVG       G++LI MY KCG V  AR +F  +  ++ VS N++IAG
Sbjct: 527 LKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+  G   +A+ +F  +    L P   T A +L+    +  L    Q+H  ++K GFL  
Sbjct: 587 YTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645

Query: 412 DSMISC-LITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
             M+   L+  Y       +S+ + SE+   K  V   AL S     + H +AL+ Y+ +
Sbjct: 646 SEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  + + F+ VL+ACA M+ L+ G+ IH L     ++ D    S++IDMY KCG +
Sbjct: 706 RSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDV 765

Query: 530 EDAKRAFRKICR-DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           + + + FR++ R +++  WN+M++G A++G   E   +F +M +  + PDE+T+L VL++
Sbjct: 766 KGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAG V E R     M + + L P+++H  C+VD+LGR G L  A+  I+++    D  
Sbjct: 826 CSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM 885

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL AC  +G+   G  A  KL+EL+P + S+YVLLS++YA +  W+    LR+EMK
Sbjct: 886 LWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMK 945

Query: 709 EKFLCKEPGYSWIHVG 724
            K + K PGYSWI  G
Sbjct: 946 LKGVKKLPGYSWIEPG 961



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 290/604 (48%), Gaps = 41/604 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S  +K G  L  +L   ++  + K  +   A +     + +D+  +N+++S       
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
               ++ F  +    +RP+ FTF+ ++ AC  LQ+      VH    K GF  R +   G
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK   +  A + F   L+LD V++TA++ GYV +G   ++ +VF  M+ +G   +
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + +L  V+                                  N YV  G+  DA K+F +
Sbjct: 243 QITLVTVV----------------------------------NAYVALGRLADARKLFTQ 268

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I  P+VV+W+  I+         EA   F +L+    +    ++ ++LS++    +L  G
Sbjct: 269 IPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYG 328

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             + A   K G  + V +G+AL++MY KC +++ A+ +F+ L  ++ V WN+M+ G+++N
Sbjct: 329 SMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQN 388

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   + ++ F  M      P+ +T  SI  A ++   L    Q+H+ +IK+ F  +  + 
Sbjct: 389 GLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVA 448

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y K  AL E+++    +   + V  NA+    V    + EA  ++R +  +   
Sbjct: 449 NALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL 508

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  + + ++ ACA + +L++G+  HCL +K   D      S++IDMY KCG +  A+  
Sbjct: 509 PDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDV 568

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  +   ++   NA++ GY   G   E  +LF ++   G+KP E+T+  +L  C  A ++
Sbjct: 569 FYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFML 627

Query: 596 REAR 599
              R
Sbjct: 628 NLGR 631



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 169/671 (25%), Positives = 303/671 (45%), Gaps = 62/671 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q++  + K G          LI  + K    R A R +FD   N D +++ ALI+G  R 
Sbjct: 163 QVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDA-RLVFDGALNLDTVSWTALIAGYVRD 221

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
                A+K+FDR++  G  PD  T  ++V A                             
Sbjct: 222 GFPMEAVKVFDRMQRVGHAPDQITLVTVVNA----------------------------- 252

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
              Y   G +  A   F    + + VA+  M+ G+   G  +++   F+E++  GL+   
Sbjct: 253 ---YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-M 235
            SL +VL A   +     G  +H    K G    V  ++ +A++N+Y +C  K+DA K +
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV--YVGSALVNMYAKC-SKMDAAKQV 366

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ + E ++V W+  +   A +G+  E    F  ++ +  Q +E+T  ++ S+      L
Sbjct: 367 FNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYL 426

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G Q+     K  F   + + NAL+ MY K G + +AR  F+ +   D+VSWN++I GY
Sbjct: 427 NFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGY 486

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            +  + ++A  MF  M+   ++P+  ++ASI+ A +N + LK+  Q H  ++K G     
Sbjct: 487 VQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTST 546

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH-AEALELYRTIWG 471
              S LI  Y KC  +  ++ V   +  +N V +NAL  +  Y   H  EA+ L++ I  
Sbjct: 547 CAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNAL--IAGYTMGHLEEAIHLFQEIQM 604

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIE 530
              +    TF+ +L  C     L  G+ IH   +K  +      V  +++ +Y       
Sbjct: 605 VGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFV 664

Query: 531 DAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           D++  F ++     L  W A++ GYAQ   + +    +  M    + PD+  + +VL +C
Sbjct: 665 DSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRAC 724

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQ----LEHYAC--IVDLLGRVGLLEGAKMTIDQMPI 643
             AG+     + L    ++H LI      ++   C  ++D+  + G ++G+     +MP 
Sbjct: 725 --AGM-----SSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPR 777

Query: 644 PPDAHIWQSLL 654
             +   W S++
Sbjct: 778 RNNVISWNSMI 788



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 218/470 (46%), Gaps = 62/470 (13%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           IH   +K+G   G+   L N I++LYV+CG    A K F  + + DV +W+  ++   D 
Sbjct: 63  IHSKSLKIGV--GLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLD- 119

Query: 258 VEAFGLFKD-------LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
               GLF         +  ++ + NE+T   +LS+  G + +  G+Q+    +K GF   
Sbjct: 120 ---HGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
                 LI MY KC  + DAR +FD  +  D+VSW ++IAGY  +GF  +A+ +F  M  
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
               P+  T+ +++ A                                   Y     L +
Sbjct: 237 VGHAPDQITLVTVVNA-----------------------------------YVALGRLAD 261

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           ++++ ++I   N V  N + S         EA+  +  +  +  +   S+   VL A A+
Sbjct: 262 ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIAS 321

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           ++ L  G  +H  A K   D +++V SA+++MY KC  ++ AK+ F  +   ++  WNAM
Sbjct: 322 LSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAM 381

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + G+AQ+G   EV   F+ M + G +PDE T+ ++ ++C        +  YL+    LH 
Sbjct: 382 LGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACA-------SLHYLNFGGQLHT 434

Query: 611 LIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           ++ + +  +       +VD+  + G L+ A+   + M I  D   W +++
Sbjct: 435 VMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI-HDNVSWNAII 483



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 106/213 (49%)

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           ++L  A  +HS  +K G  L   + + ++  Y KC  ++ +++  S ++KK+    N++ 
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S+ +     A  ++ +  +W      N  TF++VL AC+ + D+  G+ +HC   K  + 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
              F +  +IDMY KC  + DA+  F          W A++ GY + G   E   +F++M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
            + G  PD+IT + V+ +    G + +AR   +
Sbjct: 235 QRVGHAPDQITLVTVVNAYVALGRLADARKLFT 267



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/468 (21%), Positives = 194/468 (41%), Gaps = 48/468 (10%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           + L   K I +   K+G      +GN ++ +Y KCG V+ A+  F  L  KD  +WNS++
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y ++G F   +  F  M    + PN +T A +L A S  + +    QVH  + K+GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                   LI  Y KC  L +++ V       + V   AL +  V      EA++++  +
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                                               +  +  D      V++ Y   G +
Sbjct: 235 -----------------------------------QRVGHAPDQITLVTVVNAYVALGRL 259

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA++ F +I   ++  WN M+ G+A+ G   E  + F ++ K G+K    +  +VL++ 
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
               ++    + +   +   GL   +   + +V++  +   ++ AK   + +    +  +
Sbjct: 320 ASLSMLNYG-SMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG-ERNIVL 377

Query: 650 WQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           W ++L      G     +   +  K    QPD E T+  + +  AS    N  G+L   M
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPD-EFTFTSIFSACASLHYLNFGGQLHTVM 436

Query: 708 -KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K KF       S + V       YA   +  ++++ + EL+K+++++
Sbjct: 437 IKNKFA------SNLFVANALVDMYAKSGALKEARKQF-ELMKIHDNV 477


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 187/602 (31%), Positives = 315/602 (52%), Gaps = 69/602 (11%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYT 278
           ++ + G+  DA  +F E+ E D VSW+  +     A    EA     D+  + F   ++T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG------------- 325
           + N+LSS    +    G+++ +F  K+G    V + N++++MYGKCG             
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 326 ------------------QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                             +++ A S+F+ +  +  VSWN+MIAGY++NG   +AL +F  
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 368 ML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           ML E S+ P+ +T+ S+L A +N  +++   QVH++I+++    +  + + LI+TY K  
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 427 ALNESKRVLSE---------------------------------IDKKNAVHINALASVL 453
           ++  ++R++ +                                 ++ ++ V   A+    
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                + EA++L+R++     E N  T + VL  CA++  L+ GK IHC A+++  +Q  
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            V +A+I MY + G+   A+R F ++C R     W +M++  AQHG   E   LF +M +
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GV+PD ITY+ VL++C HAG V E + Y   + + H + P++ HYAC+VDLL R GL  
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A+  I +MP+ PDA  W SLLSAC ++ N +L  LA  KLL + P+N   Y  ++N+Y+
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + G W+D  ++ K  KEK + KE G+SW H+    H F A D  H Q   +Y    +++E
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600

Query: 753 HM 754
            +
Sbjct: 601 EI 602



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 226/539 (41%), Gaps = 107/539 (19%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           +AKSG +  A   F +  + D V++T MV G    G F ++ +  ++M + G    +F+L
Sbjct: 2   FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61

Query: 183 TAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
           T VL +    + G    ++H F VK+G   G C  + N+++N+Y +CG    A  +F+ +
Sbjct: 62  TNVLSSCAVTQAGAVGRKVHSFVVKLGL--GSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 240 -----------------------------TEPD--VVSWSERIAAACDG---VEAFGLF- 264
                                        + PD  +VSW+  IA         +A  LF 
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + L  +    +E+T+ ++LS+      +R GKQ+ A+  +        + NALIS Y K 
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239

Query: 325 GQVNDARSIFD---------------------------------YLIFKDSVSWNSMIAG 351
           G V +AR I D                                  +  +D V+W +MI G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y +NG  ++A+D+F  M+     PN YT+A++L   ++   L    Q+H   I+S     
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 412 DSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIW 470
            S+ + +IT Y +  +   ++R+  ++  +K  +   ++   L       EA+ L+  + 
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +  E +  T+  VL AC+    + +GK         RY   I  E  +           
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGK---------RYYDQIKNEHQIA---------- 460

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                        ++ +  M+   A+ G + E      +M    V+PD I + ++L++C
Sbjct: 461 -----------PEMSHYACMVDLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSAC 505



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 138/589 (23%), Positives = 239/589 (40%), Gaps = 120/589 (20%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           + AD R  F    +   RD +++  ++ GL R  + G A+K    +   G  P  FT ++
Sbjct: 7   RLADARGVF---AEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTN 63

Query: 87  LVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE--------------- 128
           ++ +C   Q   +   VH   +KLG  S V + +  +  Y K G+               
Sbjct: 64  VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 123

Query: 129 ------IVS----------AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-R 171
                 +VS          AE  F    D   V++ AM+ GY  NG   K+ ++F  M  
Sbjct: 124 VSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 183

Query: 172 SLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVK--VGFLSGVCNHLNN--------- 217
              +  +EF++T+VL A     +V+ G+Q+H + ++  + + S V N L +         
Sbjct: 184 ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVE 243

Query: 218 --------------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---A 254
                               A++  YV+ G    A +MF  +   DVV+W+  I      
Sbjct: 244 NARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQN 303

Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               EA  LF+ +     + N YT+  +LS       L  GKQI     +    +  S+ 
Sbjct: 304 GRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVS 363

Query: 315 NALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           NA+I+MY + G    AR +FD + + K++++W SMI   +++G   +A+ +F  ML   +
Sbjct: 364 NAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGV 423

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+  T   +L A S+                +GF                   +NE KR
Sbjct: 424 EPDRITYVGVLSACSH----------------AGF-------------------VNEGKR 448

Query: 434 VLSEIDKKNAV-----HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
              +I  ++ +     H   +  +L  A   +EA E  R +     E +   +  +L AC
Sbjct: 449 YYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLLSAC 505

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
               + E  + +    L +    +    SA+ ++Y  CG   DA R ++
Sbjct: 506 RVHKNAELAE-LAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWK 553



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L+ I  T L+  + K  D   A        NRD++ + A+I G  +  ++  A+ LF  +
Sbjct: 257 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 316

Query: 73  RYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              G  P+++T ++++  C S   L   + +H   ++        + +  I  YA+SG  
Sbjct: 317 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSF 376

Query: 130 VSAEMCFRD-CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
             A   F   C   + + +T+M+     +G+ +++  +F EM   G+E +  +   VL A
Sbjct: 377 PWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSA 436

Query: 189 SFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDV 244
                 V EG++ +        ++   +H    +++L  R G   +A +    +  EPD 
Sbjct: 437 CSHAGFVNEGKRYYDQIKNEHQIAPEMSHY-ACMVDLLARAGLFSEAQEFIRRMPVEPDA 495

Query: 245 VSWSERIAA 253
           ++W   ++A
Sbjct: 496 IAWGSLLSA 504


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 207/631 (32%), Positives = 341/631 (54%), Gaps = 15/631 (2%)

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE- 194
           F +    D+V++  M+ GY   G+ + S  +F +M+  G  ++ +S + +L      K  
Sbjct: 4   FDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRF 63

Query: 195 --GEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
             GEQ+HG  VK G+    CN ++ ++++++Y +C +  DA   F EI EP+ VSW+  I
Sbjct: 64  DLGEQVHGLVVKGGY---ECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120

Query: 252 AAAC---DGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           A      D   AF L   +       +++ T   LL+ +         KQ+ A   K+G 
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFC 366
              ++I NA+IS Y  CG V+DA+ +FD L   KD +SWNSMIAG S++     A ++F 
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK-- 424
            M    +  + YT   I+ A S  +       +H  +IK G     S+ + LI+ Y +  
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFP 300

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
              + ++  +   +  K+ V  N++ +         +A++ +R +  S  EV+   FS V
Sbjct: 301 TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDS 543
           L++C+ +  L+ G+  H LA K+ ++ + FV S++I MY KCG IE+A++ F +I  + +
Sbjct: 361 LRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHN 420

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
              WNAM++GYAQHG      +LF++M    VK D +T+ A+LT+C H GL++E    L+
Sbjct: 421 TIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 480

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            M  ++ + P++EHYA  VDLLGR GL+   K  I+ MP+ PD  + ++ L  C   G I
Sbjct: 481 SMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEI 540

Query: 664 DLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           ++     + LLE++P++   YV LS++Y+    W +   ++K MKE+ + K PG+SWI +
Sbjct: 541 EMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIEI 600

Query: 724 GGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
               + F A D SHS SKEIY  +  L + M
Sbjct: 601 RNQVNAFNAEDRSHSLSKEIYLMIEDLTQEM 631



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 260/520 (50%), Gaps = 29/520 (5%)

Query: 36  RFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ 95
           R   +   RD +++N +ISG     +   +  LF  ++  G   D ++FS L+K   S +
Sbjct: 2   RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61

Query: 96  E---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
                E VHG+ +K G+   VY+ S  ++ YAK   +  A   F + L+ ++V++ A++ 
Sbjct: 62  RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121

Query: 153 GYVWNGEFDKSKEVF-----VEMR-SLGLELNEFS-LTAVLGASFDVKEGEQIHGFGVKV 205
           G+V   +   +K  F     +EM+ ++ ++   F+ L  +L         +Q+H   +K+
Sbjct: 122 GFV---QVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 178

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDVVSWSERIAAACDGVE---AF 261
           G    +   + NA+++ Y  CG   DA ++FD +    D++SW+  IA      +   AF
Sbjct: 179 GLEHEIT--ICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAF 236

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            LF ++  N  + + YT   ++S+  GE     GK +     K G  +V S+ NALISMY
Sbjct: 237 ELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMY 296

Query: 322 GK--CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
            +   G + DA S+F+ L  KD VSWNS++ G+S+NG    A+  F ++   ++  + Y 
Sbjct: 297 IQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYA 356

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            +++L + S+  +L+   Q H+   KS F  ++ + S LI  Y KC  +  +++   +I 
Sbjct: 357 FSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQIS 416

Query: 440 KK-NAVHINALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            K N +  NA+  +L YA  H     +L+L+  +     +++  TF+ +L AC+    ++
Sbjct: 417 SKHNTIAWNAM--ILGYAQ-HGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQ 473

Query: 496 QG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           +G + ++ +    +    +   +A +D+  + G +   K 
Sbjct: 474 EGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKE 513



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 216/448 (48%), Gaps = 20/448 (4%)

Query: 233 VKMFDEITEPDVVSWSERIAA--ACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +++FDE+ + D VSW+  I+   +C  +E ++ LF D++     ++ Y+   LL  +   
Sbjct: 1   MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           +    G+Q+     K G+   V +G++L+ MY KC +V DA   F  ++  +SVSWN++I
Sbjct: 61  KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120

Query: 350 AGYSENGFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           AG+ +      A  +   M ++ ++  +  T A +L  + +        QVH+ ++K G 
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYR 467
             + ++ + +I++Y  C  ++++KRV   +   K+ +  N++ + L        A EL+ 
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK-- 525
            +  +  E +  T++ ++ AC+       GK++H L +K   +Q   V +A+I MY +  
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFP 300

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            G ++DA   F  +    L  WN++M G++Q+G   +    F  +    ++ D+  + AV
Sbjct: 301 TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLGRVGLLEGAKMTID 639
           L SC     ++  +         H L  +          + ++ +  + G++E A+   +
Sbjct: 361 LRSCSDLATLQLGQ-------QTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFE 413

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           Q+    +   W +++     +G+  + L
Sbjct: 414 QISSKHNTIAWNAMILGYAQHGSGQVSL 441



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 212/417 (50%), Gaps = 24/417 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L++K G+  +  + ++L+  + K      AF    +    + +++NALI+G  +  
Sbjct: 68  QVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVR 127

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKA------CGSLQENEIVHGVCLKLGFSSRV 113
            +  A  L   +  +  +  D  TF+ L+        C  L++   VH   LKLG    +
Sbjct: 128 DTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLEHEI 184

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            + +  I +YA  G +  A+  F D L    D +++ +M+ G   + + + + E+F EM 
Sbjct: 185 TICNAMISSYANCGLVSDAKRVF-DGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMH 243

Query: 172 SLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR--C 226
              +E + ++ T ++ A    +    G+ +HG  +K G        ++NA++++Y++   
Sbjct: 244 RNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQ--VTSVSNALISMYIQFPT 301

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLL 283
           G   DA+ +F+ +   D+VSW+  +   + +G+  +A   F+ LR ++ ++++Y    +L
Sbjct: 302 GVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVL 361

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DS 342
            S      L+ G+Q  A   K  F     + ++LI MY KCG + +AR  F+ +  K ++
Sbjct: 362 RSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNT 421

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           ++WN+MI GY+++G    +LD+F  M   ++  +  T  +IL A S++  +++ +++
Sbjct: 422 IAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 478


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 234/771 (30%), Positives = 376/771 (48%), Gaps = 42/771 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR------DIITYNALISG 55
           I++ ++  G   DP ++T+LI+ + K      A + +FD  +       DI  +N +I G
Sbjct: 77  IHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQ-VFDKMSESRDSAPDITVWNPVIDG 135

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
             ++      L  F R+                +          +HG  ++  F    YL
Sbjct: 136 YFKYGHFEEGLAQFCRM----------------QELSWYMAGRQIHGYIIRNMFEGDPYL 179

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  I  Y+     + A   F    +  N VA+  M+ G+V NG ++KS E++   ++  
Sbjct: 180 ETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNEN 239

Query: 175 LELNEFSLTAVL-----GASFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCG 227
            +L   S T        G   D   G Q+H   +K+ F     VC  L    + +Y + G
Sbjct: 240 CKLVSASFTGAFTACSHGEVLDF--GRQVHCDVIKMNFQDDPYVCTSL----LTMYAKSG 293

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS 284
              DA K+FD++ + +V   +  I+A        +A GL+  ++  +  ++ +T+ +LLS
Sbjct: 294 SVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLS 353

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                     G+ + A   K      V+I +AL++MY KCG   DA S+F  +  +D V+
Sbjct: 354 GCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVA 413

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W SMIAG+ +N  F  ALD+F  M +  +  +   M S++ A    ++++    +H   I
Sbjct: 414 WGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAI 473

Query: 405 KSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           K G L  D  ++C L+  Y K      ++ V S +  KN V  N++ S   +      ++
Sbjct: 474 KRG-LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSI 532

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L   I      ++  + + VL A +++  L +GK +H   ++ +   D+ VE+A+IDMY
Sbjct: 533 NLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMY 592

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG ++ A+  F  + R +L  WN+M+ GY  HG   E   LF +M +    PDE+T+L
Sbjct: 593 VKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFL 652

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           A++TSC H+G+V E       M   +G+ P++EHYA +VDLLGR G L+ A   I  MPI
Sbjct: 653 ALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPI 712

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
             D  +W  LL AC  + N++LG L    LL+++P   S YV L NLY    MW+    L
Sbjct: 713 DADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANL 772

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           R  MK + L K PG SWI V      F++GDSS ++  EIYK L  L  +M
Sbjct: 773 RASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNM 823



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 162/689 (23%), Positives = 306/689 (44%), Gaps = 43/689 (6%)

Query: 24  HFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFT 83
           HF +F    R F  L  T+    I  N+ I  L +  +   AL+L  +  +  L    FT
Sbjct: 2   HFNQF--ISRKFYSLRQTEVSPSI--NSKIKALVQQGKYSQALELHSKTPHSALTTAKFT 57

Query: 84  FSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF---- 136
           F SL+K C SL        +H   + +G  S  Y+ +  I  Y K G + SA   F    
Sbjct: 58  FPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS 117

Query: 137 --RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
             RD    D   +  ++ GY   G F++    F  M+ L   +                 
Sbjct: 118 ESRDSAP-DITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWYM----------------A 160

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDVVSWSERIAA 253
           G QIHG+ ++  F      +L  A++ +Y  C + ++A  +F ++    ++V+W+  I  
Sbjct: 161 GRQIHGYIIRNMFEGD--PYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 218

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
             +     ++  L+   +  + ++   +     ++     +L  G+Q+     K+ F + 
Sbjct: 219 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 278

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             +  +L++MY K G V DA+ +FD ++ K+    N+MI+ +  NG    AL ++  M  
Sbjct: 279 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA 338

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
                + +T++S+L   S   S      VH+ +IK     + ++ S L+T Y KC +  +
Sbjct: 339 GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTED 398

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +  V   + +++ V   ++ +         +AL+L+R +     + +    + V+ A   
Sbjct: 399 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLG 458

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + ++E G  IH  A+K   + D+FV  +++DMY K G  E A+  F  +   +L  WN+M
Sbjct: 459 LENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSM 518

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           +  Y+ +G      NL  ++ + G   D ++   VL +      + + +T  +    L  
Sbjct: 519 ISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ- 577

Query: 611 LIPQ-LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGL 667
            IP  L+    ++D+  + G L+ A++  + MP   +   W S+++    +GN +  + L
Sbjct: 578 -IPSDLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRL 635

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGM 696
               K  E  PD E T++ L    + +GM
Sbjct: 636 FKEMKRSETAPD-EVTFLALITSCSHSGM 663



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 265/558 (47%), Gaps = 21/558 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           QI+  +I+N    DP L T LI  ++  +    A+      +NR +I+ +N +I G    
Sbjct: 163 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 222

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
                +L+L+   + +  +  + +F+    AC     L     VH   +K+ F    Y+ 
Sbjct: 223 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 282

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAKSG +  A+  F   LD +     AM+  ++ NG    +  ++ +M++    
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 342

Query: 177 LNEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ F+++++L       S+D   G  +H   +K    S V   + +A++ +Y +CG   D
Sbjct: 343 VDSFTISSLLSGCSVVGSYDF--GRTVHAEVIKRSMQSNVA--IQSALLTMYYKCGSTED 398

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F  + E DVV+W   IA  C      +A  LF+ +     + +   M +++S+  G
Sbjct: 399 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLG 458

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  G  I  F  K G    V +  +L+ MY K G    A  +F  +  K+ V+WNSM
Sbjct: 459 LENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSM 518

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ YS NG    ++++   +L+     +  ++ ++L AVS+  +L +   +H++ I+   
Sbjct: 519 ISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI 578

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL-ASVLVYASCHAEALELYR 467
             D  + + LI  Y KC  L  ++ +   + ++N V  N++ A    + +C  EA+ L++
Sbjct: 579 PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCE-EAVRLFK 637

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +  S    +  TF  ++ +C+    +E+G  +  L ++  Y  +  +E  ++V+D+  +
Sbjct: 638 EMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQL-MRIEYGVEPRMEHYASVVDLLGR 696

Query: 526 CGTIEDAKRAFRKICRDS 543
            G ++DA    R +  D+
Sbjct: 697 AGRLDDAYSFIRGMPIDA 714


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 214/704 (30%), Positives = 358/704 (50%), Gaps = 17/704 (2%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD--AFTFSSLVKACGSLQENEI-- 99
           R    +N+L   LA       AL++++R+   G+RPD   F F+    A  +  E+    
Sbjct: 78  RSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKG 137

Query: 100 --VHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
             +H   L+ G   + V+  +  +  YA  G    A   F +    D V++ ++V   + 
Sbjct: 138 AELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLT 197

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
           NG  + +K   V M   G+ +N  SL ++L   G   D   G  +HG  +K G L+ V N
Sbjct: 198 NGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFG-LNSVVN 256

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFN 270
            L NA++++Y + G    ++ +F+ + E + VSW+  I   A A    +   +F+ +  +
Sbjct: 257 -LGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEH 315

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           D      T+ +LL ++        GK++  +  +      + I N L+ MY K G    A
Sbjct: 316 DVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKA 375

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            +IF+ +  ++ VSWN+MIA  ++NG   +A  +   M +    PN +T+ ++L A S  
Sbjct: 376 SAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRV 435

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            S+K   Q+H+  I+   + D  + + LI  Y KC  LN ++ +     +K+ V  N L 
Sbjct: 436 ASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLI 494

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
                + C  E+L L++ +  +  E +  +F   L AC+ ++  +QGK IH + +K   D
Sbjct: 495 VGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLD 554

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
              F+ ++++D+Y K G ++ A + F +I +  +A WN M++GY  HG       LF+ M
Sbjct: 555 SHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLM 614

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              G++ D ++Y+AVL+ C H GLV   + Y S M     + PQ  HYAC+VDLLGR G 
Sbjct: 615 KDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMI-AQNIKPQQMHYACMVDLLGRAGQ 673

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           L  +   I  MP   ++ +W +LL +C I+G+I+L  LA   L EL+P+N   Y LL N+
Sbjct: 674 LSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNM 733

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           Y+ +GMWN+   ++K MK + + K P YSW+  G     F  GD
Sbjct: 734 YSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 777



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 286/604 (47%), Gaps = 32/604 (5%)

Query: 14  DPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           D     TL++ +    + AD RR F    +   RD++++N+L+S L        A +   
Sbjct: 153 DVFAGNTLVTFYAVCGRAADARRVFD---EMPARDVVSWNSLVSALLTNGMLEDAKRAVV 209

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
            +   G+  +  +  S++ ACG+ ++      VHG+ LK G +S V L +  ++ Y K G
Sbjct: 210 GMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFG 269

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           ++ S+   F    + + V++ + +  +   G  +   E+F  M    +     +L+++L 
Sbjct: 270 DLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLP 329

Query: 188 ASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A  D+     G+++HG+ ++    S +   + N +M++Y + G    A  +F+ I   +V
Sbjct: 330 ALVDLGYFHLGKELHGYSIRRAVESDI--FIANTLMDMYAKFGCSEKASAIFENIEVRNV 387

Query: 245 VSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  IA         EAF L  +++ N    N +T++NLL +      ++ GKQI A+
Sbjct: 388 VSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW 447

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             +   M  + + NALI +Y KCGQ+N AR IFD    KD VS+N++I GYS++    ++
Sbjct: 448 SIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFES 506

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS--MISCLI 419
           L +F  M    +  +  +    L A SN  + KQ  ++H  ++K   LLD    + + L+
Sbjct: 507 LHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR--LLDSHPFLANSLL 564

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWGSCREV 476
             Y K   L+ + ++ + I +K+    N +  +L Y   H +   A EL+  +     E 
Sbjct: 565 DVYTKGGMLDTASKIFNRITQKDVASWNTM--ILGYG-MHGQIDVAFELFDLMKDDGIEY 621

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +  ++  VL  C+    +++GK      +           + ++D+  + G + ++    
Sbjct: 622 DHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEII 681

Query: 537 RKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAGL 594
           R +  R +   W A++     HG   E++ L  +   F +KP+   Y  +L +    +G+
Sbjct: 682 RNMPFRANSDVWGALLGSCRIHGDI-ELARLAAE-HLFELKPENSGYYTLLRNMYSESGM 739

Query: 595 VREA 598
             EA
Sbjct: 740 WNEA 743



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 201/426 (47%), Gaps = 33/426 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   I+     D  ++ TL+  + KF    +A     + + R+++++NA+I+ L +  
Sbjct: 342 ELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNG 401

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A +L   ++  G  P++FT  +L+ AC    S++  + +H   ++    S +++ +
Sbjct: 402 AEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSN 461

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G++  A   F D  + D V+Y  ++ GY  +    +S  +F +MR  G+E 
Sbjct: 462 ALIDVYAKCGQLNLARYIF-DRSEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEH 520

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S    L A  ++   K+G++IHG  VK   L      L N+++++Y + G    A K
Sbjct: 521 DAVSFMGCLSACSNLSAFKQGKEIHGVLVKR--LLDSHPFLANSLLDVYTKGGMLDTASK 578

Query: 235 MFDEITEPDVVSWSERIAAACDGVE-----AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F+ IT+ DV SW+  I     G+      AF LF  ++ +  + +  + I +LS     
Sbjct: 579 IFNRITQKDVASWNTMILGY--GMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHG 636

Query: 290 RILRAGK----QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVS 344
            ++  GK    Q+ A   K   M        ++ + G+ GQ++++  I   + F+ +S  
Sbjct: 637 GLVDRGKKYFSQMIAQNIKPQQMHYA----CMVDLLGRAGQLSESAEIIRNMPFRANSDV 692

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQA 396
           W +++     +G    A     H+ E        ++L+ N Y+ + +    +  K L ++
Sbjct: 693 WGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKS 752

Query: 397 MQVHSH 402
            +V  +
Sbjct: 753 RKVQKN 758


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 174/463 (37%), Positives = 267/463 (57%), Gaps = 1/463 (0%)

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L  G+Q+ A      +   V +G  L++MY +CG ++DAR++ D +  +  VSW +M
Sbjct: 55  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 114

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GYS+     +ALD+F  ML    IPN YT+A++L + S  +S+ Q  QVHS ++K+ F
Sbjct: 115 ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNF 174

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + S L+  Y K   + E++RV   + +++ V   A+ S         EAL+L+R 
Sbjct: 175 ESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 234

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++    + N  TF+ ++ A + +  L+ GK +H L L+      + +++++IDMY KCG 
Sbjct: 235 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGK 294

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  ++R F  +   S+  WNAM+MGY +HG  HEV +LF  + K  VKPD +T LAVL+ 
Sbjct: 295 LLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSG 353

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV E       +      +    HY CI+DLLGR G LE A   I+ MP      
Sbjct: 354 CSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 413

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW SLL AC ++ N+ +G L   KLLE++P+N   YV+LSN+YA+AGMW DV K+RK M 
Sbjct: 414 IWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLML 473

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           EK + KEPG SWI +    H F++ +  H   K+I  ++ +++
Sbjct: 474 EKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIF 516



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 14/376 (3%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           EG Q+H   +   +   V   L   ++ +YVRCG   DA  + D + E  VVSW+  I+ 
Sbjct: 60  EGRQVHARMITARYRPAV--FLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISG 117

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                  VEA  LF  +       NEYT+  +L+S  G + +  GKQ+ +   K  F   
Sbjct: 118 YSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESH 177

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + +G++L+ MY K   + +AR +FD L  +D VS  ++I+GY++ G   +ALD+F  +  
Sbjct: 178 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 237

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             +  N  T  +++ A+S   SL    QVH+ I++       ++ + LI  Y KC  L  
Sbjct: 238 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 297

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S+RV   + +++ V  NA+           E + L++ +    +  +  T   VL  C+ 
Sbjct: 298 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKP-DSVTLLAVLSGCSH 356

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG 546
              +++G  I    +K   +Q   + +     +ID+  + G +E A      +  +S   
Sbjct: 357 GGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 413

Query: 547 -WNAMMMGYAQHGCYH 561
            W +++     H   H
Sbjct: 414 IWGSLLGACRVHANVH 429



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 203/433 (46%), Gaps = 17/433 (3%)

Query: 44  RDIITYNALISGLA-RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
           R ++   A   GLA + C   P L+    +   G       + + + AC    +L E   
Sbjct: 5   RGLLRPEAAARGLALQRCFVAP-LRAASGMALPGASARFHEYEAAITACIERRALWEGRQ 63

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH   +   +   V+L +  +  Y + G +  A        +   V++T M+ GY     
Sbjct: 64  VHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTER 123

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
             ++ ++F++M   G   NE++L  VL        + +G+Q+H   VK  F S +   + 
Sbjct: 124 HVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHM--FVG 181

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQ 273
           ++++++Y +     +A ++FD + E DVVS +  I+  A  G+  EA  LF+ L     Q
Sbjct: 182 SSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQ 241

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N  T   L++++ G   L  GKQ+ A   +      V++ N+LI MY KCG++  +R +
Sbjct: 242 CNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRV 301

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD ++ +  VSWN+M+ GY  +G  ++ + +F   L   + P+  T+ ++L   S+   +
Sbjct: 302 FDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLV 360

Query: 394 KQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI--NALA 450
            + + +   ++K    LL      C+I   G+   L ++  ++  +  ++   I  + L 
Sbjct: 361 DEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLG 420

Query: 451 SVLVYASCHAEAL 463
           +  V+A+ H   L
Sbjct: 421 ACRVHANVHVGEL 433



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 180/372 (48%), Gaps = 34/372 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I   +     L T L++ + +      A   L     R ++++  +ISG ++  
Sbjct: 63  QVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTE 122

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL LF ++   G  P+ +T ++++ +C    S+ + + VH + +K  F S +++ S
Sbjct: 123 RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGS 182

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKS  I  A   F    + D V+ TA++ GY   G  +++ ++F ++ S G++ 
Sbjct: 183 SLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQC 242

Query: 178 NEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           N  + T ++      AS D   G+Q+H   ++      V   L N+++++Y +CG+ L +
Sbjct: 243 NHVTFTTLVTALSGLASLDY--GKQVHALILRKELPFFVA--LQNSLIDMYSKCGKLLYS 298

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD + E  VVSW+  +        G E   LFKDL   + + +  T++ +LS     
Sbjct: 299 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHG 357

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNAL---------ISMYGKCGQVNDARSIFDYLIFK 340
            ++  G  I        F  VV   +AL         I + G+ G++  A ++ + + F+
Sbjct: 358 GLVDEGLDI--------FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 409

Query: 341 DSVS-WNSMIAG 351
            + S W S++  
Sbjct: 410 STPSIWGSLLGA 421



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGST----------FSIVLKACAAMTDLEQGKA 499
           A  L+     A  L L R      R  +G            +   + AC     L +G+ 
Sbjct: 4   ARGLLRPEAAARGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQ 63

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H   + ARY   +F+ + ++ MY +CG ++DA+    ++   S+  W  M+ GY+Q   
Sbjct: 64  VHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTER 123

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           + E  +LF KM + G  P+E T   VLTSC
Sbjct: 124 HVEALDLFIKMLRAGCIPNEYTLATVLTSC 153


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 194/545 (35%), Positives = 302/545 (55%), Gaps = 29/545 (5%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFND 271
           L N ++++YV+ G  ++A ++FDE+   +VVSW+  IAA      G EA G F +++   
Sbjct: 102 LGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVG 161

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            Q N +T  ++L +     +L    +      K GF   V +GN L+ MY K G +  AR
Sbjct: 162 IQPNHFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAR 218

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA--VSN 389
            +FD +  +D VSWN+MIAGY +NG    AL +F  + +  +I     MA   +   V N
Sbjct: 219 ELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVEN 278

Query: 390 SKSLKQAMQ--------------VHSHIIKSGFLL-----DDSMIS--CLITTYGKCNAL 428
           +  L + M               V +  +K  F L     + ++IS   +I+ + +   +
Sbjct: 279 AVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQV 338

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E+ ++   + + N V  NA+ +          AL+L+  +     + N  TF+IVL AC
Sbjct: 339 EEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPAC 398

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           AA+  LEQG   H + +++ +  D+ V + ++ MY KCG+IEDA++ F ++ +   A  +
Sbjct: 399 AALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLS 458

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           AM++GYA +GC  E   LF +M   G+KPD +T++ VL++CCHAGLV E R Y   M+  
Sbjct: 459 AMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRF 518

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           + + P +EHY C++DLLGR G  + A   I++MPI PDA +W SLLSAC  + NIDLG  
Sbjct: 519 YHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEK 578

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
               L+ L P N + YVLLSN+YA+AG W+D+G +R  MK++ + K+ G SWI +    H
Sbjct: 579 VAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVH 638

Query: 729 HFYAG 733
            F  G
Sbjct: 639 AFLVG 643



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 213/457 (46%), Gaps = 30/457 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L   L+S + K      A R   +   ++++++ A+I+  AR      AL  F  ++
Sbjct: 99  DISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQ 158

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
             G++P+ FTF+S++ AC  L+     H   +K GF S V++ +G ++ YAK G I  A 
Sbjct: 159 DVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAR 218

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR---------------SLGLELN 178
             F      D V++ AM+ GYV NG  + + ++F E+                  G   N
Sbjct: 219 ELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVEN 278

Query: 179 EFSLTAVLGASFDVKEGEQIHGF----GVKVGF-LSGVCNHLN----NAIMNLYVRCGQK 229
              L   +     V     I G+     VK  F L  +    N    NA+++ + + GQ 
Sbjct: 279 AVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQV 338

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A+K+F  + E +VVSW+  IA      +   A  LF  ++  D + N  T   +L + 
Sbjct: 339 EEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPAC 398

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               +L  G +      + GF   V +GN L+ MY KCG + DAR +FD +  +DS S +
Sbjct: 399 AALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLS 458

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI GY+ NG   ++L++F  M    L P+  T   +L A  ++  + +  Q +  I+  
Sbjct: 459 AMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQ-YFDIMTR 517

Query: 407 GFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
            + +  +M    C+I   G+    +E+  +++++  K
Sbjct: 518 FYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIK 554



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 8/263 (3%)

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           + ++    + G   +AL +   M+E  + P+  T  S+L+   N+KSL  A  +H+H+I+
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 406 SGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + F   D S+ + L++ Y K  +L E++RV  E+  KN V   A+ +         EAL 
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
            +  +     + N  TF+ +L AC   TDLE     H   +K  ++ ++FV + ++DMY 
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPAC---TDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYA 209

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           K G IE A+  F K+ +  +  WNAM+ GY Q+G   +   LF ++     K D IT+  
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWNT 265

Query: 585 VLTSCCHAGLVREARTYLSCMSD 607
           ++      G V  A      M +
Sbjct: 266 MMAGYAQCGDVENAVELFEKMPE 288



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 180/392 (45%), Gaps = 52/392 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           + +  ++K G   +  +   L+  + K      A R LFD    RD++++NA+I+G  + 
Sbjct: 184 EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFA-RELFDKMPQRDVVSWNAMIAGYVQN 242

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLV 116
                ALKLF  +     + D  T+++++     CG ++    +     +    S   ++
Sbjct: 243 GLIEDALKLFQEIP----KRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMI 298

Query: 117 SGFIEN---------------------------YAKSGEIVSAEMCFRDCLDLDNVAYTA 149
           +G+++N                           +A++G++  A   F+   + + V++ A
Sbjct: 299 AGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNA 358

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVG 206
           M+ GY  NG+ + + ++F +M+ + ++ N  +   VL A      +++G + H   ++ G
Sbjct: 359 MIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSG 418

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGL 263
           F S V   + N ++ +Y +CG   DA K+FD + + D  S S  I   A +G   E+  L
Sbjct: 419 FQSDVL--VGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLEL 476

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ----IQAFCYKVGFMEVVSIGNALIS 319
           F+ ++F   + +  T + +LS+     ++  G+Q    +  F +    ME       +I 
Sbjct: 477 FEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYG---CMID 533

Query: 320 MYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
           + G+ G  ++A  + + +  K D+  W S+++
Sbjct: 534 LLGRAGCFDEANDLINKMPIKPDADMWGSLLS 565



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 29/278 (10%)

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD-QDIFVESAV 519
           EAL + + +  +    + ST+  +L+ C     L   K +H   ++ +++ QDI + + +
Sbjct: 47  EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           + +Y K G++ +A+R F ++   ++  W AM+  YA+H    E    F +M   G++P+ 
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI------VDLLGRVGLLEG 633
            T+ ++L +C          T L  + + H  I +    + +      VD+  + G +E 
Sbjct: 167 FTFASILPAC----------TDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEF 216

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYA 692
           A+   D+MP   D   W ++++     G I+  L    KL +  P  +  T+  +   YA
Sbjct: 217 ARELFDKMP-QRDVVSWNAMIAGYVQNGLIEDAL----KLFQEIPKRDVITWNTMMAGYA 271

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSW-IHVGGYTHH 729
             G   +  +L ++M E+ L      SW   + GY  +
Sbjct: 272 QCGDVENAVELFEKMPEQNLV-----SWNTMIAGYVQN 304


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 174/463 (37%), Positives = 267/463 (57%), Gaps = 1/463 (0%)

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L  G+Q+ A      +   V +G  L++MY +CG ++DAR++ D +  +  VSW +M
Sbjct: 23  RRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTM 82

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GYS+     +ALD+F  ML    IPN YT+A++L + S  +S+ Q  QVHS ++K+ F
Sbjct: 83  ISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNF 142

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + S L+  Y K   + E++RV   + +++ V   A+ S         EAL+L+R 
Sbjct: 143 ESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 202

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++    + N  TF+ ++ A + +  L+ GK +H L L+      + +++++IDMY KCG 
Sbjct: 203 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGK 262

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  ++R F  +   S+  WNAM+MGY +HG  HEV +LF  + K  VKPD +T LAVL+ 
Sbjct: 263 LLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSG 321

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV E       +      +    HY CI+DLLGR G LE A   I+ MP      
Sbjct: 322 CSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 381

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW SLL AC ++ N+ +G L   KLLE++P+N   YV+LSN+YA+AGMW DV K+RK M 
Sbjct: 382 IWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLML 441

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           EK + KEPG SWI +    H F++ +  H   K+I  ++ +++
Sbjct: 442 EKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIF 484



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 14/376 (3%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           EG Q+H   +   +   V   L   ++ +YVRCG   DA  + D + E  VVSW+  I+ 
Sbjct: 28  EGRQVHARMITARYRPAV--FLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISG 85

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                  VEA  LF  +       NEYT+  +L+S  G + +  GKQ+ +   K  F   
Sbjct: 86  YSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESH 145

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + +G++L+ MY K   + +AR +FD L  +D VS  ++I+GY++ G   +ALD+F  +  
Sbjct: 146 MFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYS 205

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             +  N  T  +++ A+S   SL    QVH+ I++       ++ + LI  Y KC  L  
Sbjct: 206 EGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 265

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S+RV   + +++ V  NA+           E + L++ +    +  +  T   VL  C+ 
Sbjct: 266 SRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKP-DSVTLLAVLSGCSH 324

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG 546
              +++G  I    +K   +Q   + +     +ID+  + G +E A      +  +S   
Sbjct: 325 GGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 381

Query: 547 -WNAMMMGYAQHGCYH 561
            W +++     H   H
Sbjct: 382 IWGSLLGACRVHANVH 397



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 189/392 (48%), Gaps = 15/392 (3%)

Query: 84  FSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           + + + AC    +L E   VH   +   +   V+L +  +  Y + G +  A        
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQ 197
           +   V++T M+ GY       ++ ++F++M   G   NE++L  VL        + +G+Q
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACD 256
           +H   VK  F S +   + ++++++Y +     +A ++FD + E DVVS +  I+  A  
Sbjct: 133 VHSLLVKTNFESHM--FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190

Query: 257 GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           G+  EA  LF+ L     Q N  T   L++++ G   L  GKQ+ A   +      V++ 
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQ 250

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+LI MY KCG++  +R +FD ++ +  VSWN+M+ GY  +G  ++ + +F   L   + 
Sbjct: 251 NSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVK 309

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKR 433
           P+  T+ ++L   S+   + + + +   ++K    LL      C+I   G+   L ++  
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369

Query: 434 VLSEIDKKNAVHI--NALASVLVYASCHAEAL 463
           ++  +  ++   I  + L +  V+A+ H   L
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGEL 401



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 180/372 (48%), Gaps = 34/372 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I   +     L T L++ + +      A   L     R ++++  +ISG ++  
Sbjct: 31  QVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTE 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL LF ++   G  P+ +T ++++ +C    S+ + + VH + +K  F S +++ S
Sbjct: 91  RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGS 150

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKS  I  A   F    + D V+ TA++ GY   G  +++ ++F ++ S G++ 
Sbjct: 151 SLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQC 210

Query: 178 NEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           N  + T ++      AS D   G+Q+H   ++      V   L N+++++Y +CG+ L +
Sbjct: 211 NHVTFTTLVTALSGLASLDY--GKQVHALILRKELPFFVA--LQNSLIDMYSKCGKLLYS 266

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD + E  VVSW+  +        G E   LFKDL   + + +  T++ +LS     
Sbjct: 267 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHG 325

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNAL---------ISMYGKCGQVNDARSIFDYLIFK 340
            ++  G  I        F  VV   +AL         I + G+ G++  A ++ + + F+
Sbjct: 326 GLVDEGLDI--------FDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFE 377

Query: 341 DSVS-WNSMIAG 351
            + S W S++  
Sbjct: 378 STPSIWGSLLGA 389



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 59/109 (54%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +   + AC     L +G+ +H   + ARY   +F+ + ++ MY +CG ++DA+    ++ 
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             S+  W  M+ GY+Q   + E  +LF KM + G  P+E T   VLTSC
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSC 121


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 216/670 (32%), Positives = 337/670 (50%), Gaps = 13/670 (1%)

Query: 86  SLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           S+++ C     L +    H   L  G      L +  +  Y   G  + A+  F      
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIH 199
            +  +  M+ G+   G+FD +   + +M   G   ++++   V+   G    V  G  +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---D 256
                +GF   V   + ++++  Y   G   DA  +FD +   D V W+  +       D
Sbjct: 171 DKIQFMGFELDV--FVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN- 315
              A G+F ++R  +   N  T   +LS    E ++  G Q+       G      + N 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 316 -ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            ALI +Y KC  V  AR IFD     D V   +MI+GY  NG  N AL++F  +L+  + 
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            N  T+AS+L A +   +L    ++H HI+K+G      + S ++  Y KC  L+ + + 
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              I  K+AV  N++ +         EA++L+R +  +  + +  + S  L ACA +  L
Sbjct: 409 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 468

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             GK IH   ++  +  D+F ESA+IDMY KCG ++ A R F  +   +   WN+++  Y
Sbjct: 469 HYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAY 528

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HG   +  NLF+ M   G++PD +T+LA++++C HAG V E   Y  CM++  G++ +
Sbjct: 529 GNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMAR 588

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EHYAC+VDL GR G L  A   I+ MP  PDA +W +LL AC ++GN++L  +A   L 
Sbjct: 589 MEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF 648

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +L P N   YVLLSN++A+AG W  V K+R  MKE+ + K PG SWI V   TH F A D
Sbjct: 649 DLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAAD 708

Query: 735 SSHSQSKEIY 744
            SH QS +IY
Sbjct: 709 RSHPQSSQIY 718



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/607 (26%), Positives = 282/607 (46%), Gaps = 29/607 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++ NG   + IL T L+  +     F  A    +  +      +N +I G     
Sbjct: 67  QAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMG 126

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q   AL  + ++   G  PD +TF  ++KACG L       +VH     +GF   V++ S
Sbjct: 127 QFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGS 186

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+++G I  A   F      D V +  M+ GYV NG++D +  VF+EMR      
Sbjct: 187 SLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNP 246

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFL--SGVCNHLNNAIMNLYVRCGQKLDA 232
           N  +   VL    +   +  G Q+HG  V  G    S V N    A++++Y +C     A
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF--ALIDIYFKCRDVEMA 304

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FD+ T  D+V  +  I+    +G+   A  +F+ L     + N  T+ ++L +  G 
Sbjct: 305 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 364

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK++     K G      +G+A++ MY KCG+++ A   F  +  KD+V WNSMI
Sbjct: 365 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 424

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
              S+NG   +A+D+F  M       +  ++++ L A +N  +L    ++H+ +++  F 
Sbjct: 425 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR 484

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D    S LI  Y KC  L+ + RV   +++KN V  N++ +         ++L L+  +
Sbjct: 485 SDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGM 544

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIH---C----LALKARYDQDIFVESAVIDM 522
            G   + +  TF  ++ AC     +++G  IH   C    L + AR +      + ++D+
Sbjct: 545 LGDGIQPDHVTFLAIISACGHAGQVDEG--IHYFRCMTEELGIMARMEH----YACMVDL 598

Query: 523 YCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           + + G + +A      +     AG W  ++     HG   E++ + ++ + F + P    
Sbjct: 599 FGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNV-ELAEVASR-NLFDLDPQNSG 656

Query: 582 YLAVLTS 588
           Y  +L++
Sbjct: 657 YYVLLSN 663



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 21/299 (7%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           SL P    + SIL+  ++   L Q  Q H+ ++ +G   +  + + L+  Y  C A  ++
Sbjct: 44  SLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           K +  ++    +   N +            AL  Y  + G     +  TF  V+KAC  +
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL 160

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             +  G+ +H       ++ D+FV S++I  Y + G I DA+  F ++       WN M+
Sbjct: 161 NSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVML 220

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GY ++G +   + +F +M +    P+ +T+  VL+ C        +   ++  S LHGL
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA-------SEIMINFGSQLHGL 273

Query: 612 I---------PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           +         P    +A ++D+  +   +E A+   DQ   P D  +  +++S   + G
Sbjct: 274 VVSSGLEMDSPVANTFA-LIDIYFKCRDVEMARKIFDQR-TPVDIVVCTAMISGYVLNG 330


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 211/733 (28%), Positives = 369/733 (50%), Gaps = 22/733 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++  +K+G   D  L+   IS +  F     +      +   ++++ N++IS   +   
Sbjct: 265 LHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGA 324

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              A  +F  +R +GL P+  T  S++  C +   +   E VHG+ +K G + +V +VS 
Sbjct: 325 WEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSA 384

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y+K G++ SA   F    +   + + +++ GY+ N +++        M+  G++ +
Sbjct: 385 LVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPD 444

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN----LYVRCGQKLD 231
             ++ +V+     + D+  G+ IH + V+          LN ++MN    +Y  CGQ   
Sbjct: 445 ALTVISVISKCRHTEDLHVGKSIHAYAVRSRL------ELNESVMNALLAMYADCGQLSI 498

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+F  +    ++SW+  I   A   D V     F  +R  D Q +  T+I L+SS+  
Sbjct: 499 CCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSA 558

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  G+ + +   + G    VS+ NALI+MY  CG +     +FD L   +++S+N++
Sbjct: 559 IEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNAL 618

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + GY +N  F + L +F HM++    PN  T+ ++L       S  Q   VHS+ I++  
Sbjct: 619 MTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPIC---HSQLQGKTVHSYAIRNFS 675

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            L+ S+ +  I  Y + N L     +   + ++N +  NA+ S  V       A + +R 
Sbjct: 676 KLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQ 735

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I     + +  T   ++ AC+ +   +  + +  +AL+  +D  I V +A+IDM+ +CG+
Sbjct: 736 IQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGS 795

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I  A++ F          W+ M+  Y+ HG      +LF  M   G+KPD+IT+++VL++
Sbjct: 796 ISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSA 855

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C  +G + + RT    M   HG+ P++EHYAC+VDLLGR G L+ A   +  MP  P   
Sbjct: 856 CSRSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKS 915

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           + +SLL AC  +GN  LG   G  L E    N  +YV+LSN+YASAG W+D  +LR +M+
Sbjct: 916 LLESLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDME 975

Query: 709 EKFLCKEPGYSWI 721
            K L K+ G S I
Sbjct: 976 AKGLIKDVGVSLI 988



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 172/710 (24%), Positives = 331/710 (46%), Gaps = 40/710 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           +++  +++ GH  +  + T L+  + K      + R     ++RD+I++NA+ISG +   
Sbjct: 163 EVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNG 222

Query: 59  -FCQSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVY 114
              ++  ALK   +++  G RP+A +     S+V   G     + +H   LK G      
Sbjct: 223 CLLEAAEALK---QMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDES 279

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L   FI  YA  G + S+   F   L  + V+  +M+   + +G ++K+  VF  MR  G
Sbjct: 280 LTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKG 339

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           L  N  ++ ++L      F +  GE +HG  +K G    V   + +A++++Y + G    
Sbjct: 340 LVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQV--SVVSALVSMYSKLGDLDS 397

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           AV +F  +TE   + W+  I+      +     G  + ++      +  T+I+++S    
Sbjct: 398 AVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRH 457

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK I A+  +       S+ NAL++MY  CGQ++    +F  +  +  +SWN++
Sbjct: 458 TEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTI 517

Query: 349 IAGYSENGFFNQALDMFCHM----LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           I+G++ENG     L  FC M    ++F L+    T+ +++ ++S  + +     VHS  I
Sbjct: 518 ISGFAENGDSVACLRFFCQMRLADMQFDLV----TLIALISSLSAIEDITVGESVHSLAI 573

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           +SG  LD S+ + LIT Y  C  +   +++   +   N +  NAL +     +   E L 
Sbjct: 574 RSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILP 633

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +  + ++ N  T   +L  C +     QGK +H  A++     +  + ++ I MY 
Sbjct: 634 LFYHMIKNDQKPNIITLLNLLPICHSQL---QGKTVHSYAIRNFSKLETSLFTSAICMYS 690

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           +   +E     F  +   +   WNA++    Q        + F ++    VK D +T LA
Sbjct: 691 RFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLA 750

Query: 585 VLTSCCHAGL--VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           ++++C   G   + E  T ++      G I  L     ++D+  R G +  A+   D + 
Sbjct: 751 LISACSQLGKADLAECVTAIALQKGFDGTIIVLN---ALIDMHSRCGSISFARKIFD-IS 806

Query: 643 IPPDAHIWQSLLSACTIYGN----IDLGLLAGSKLLELQPDNESTYVLLS 688
           +  D+  W ++++A +++G+    +DL L+  S    ++PD+ +   +LS
Sbjct: 807 MEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSS--GIKPDDITFVSVLS 854



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 256/524 (48%), Gaps = 12/524 (2%)

Query: 80  DAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D FTF  +++AC +   L+  + VH   ++ G    V + +  ++ YAKSG++  +   F
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE 194
                 D +++ AM+ GY  NG   ++ E   +M+  G   N  SL  ++   +   V++
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+ +H F +K G L      L  A +++Y   G    ++ +F +    ++VS +  I+ 
Sbjct: 261 AGDPLHAFALKSGVLGD--ESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISV 318

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   +AFG+F+ +R      N  T++++L        +  G+ +     K G  E 
Sbjct: 319 CMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQ 378

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           VS+ +AL+SMY K G ++ A  +F  +  K  + WNS+I+GY  N  +N  +     M  
Sbjct: 379 VSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQI 438

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + P+  T+ S++    +++ L     +H++ ++S   L++S+++ L+  Y  C  L+ 
Sbjct: 439 EGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSI 498

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
             ++   ++ +  +  N + S           L  +  +  +  + +  T   ++ + +A
Sbjct: 499 CCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSA 558

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + D+  G+++H LA+++  + D+ V +A+I MY  CG I+  ++ F  +   +   +NA+
Sbjct: 559 IEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNAL 618

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
           M GY ++  + E+  LF  M K   KP+ IT L +L   CH+ L
Sbjct: 619 MTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLP-ICHSQL 661



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 2/333 (0%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           E  GL++++    F  + +T   ++ +      LR GK++     + G    V +  AL+
Sbjct: 127 ELLGLYREV--CAFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALL 184

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY K GQV+ +R +FD +  +D +SWN+MI+GYS NG   +A +    M +    PN  
Sbjct: 185 DMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNAS 244

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           ++  I+  VS          +H+  +KSG L D+S+    I+ Y     L+ S  +  + 
Sbjct: 245 SLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQS 304

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
              N V  N++ SV +      +A  ++R +       N  T   +L  C+    +  G+
Sbjct: 305 LVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGE 364

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           ++H + +K    + + V SA++ MY K G ++ A   F  +   S   WN+++ GY  + 
Sbjct: 365 SVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNN 424

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            ++ V     +M   GV PD +T ++V++ C H
Sbjct: 425 KWNMVMGSVRRMQIEGVDPDALTVISVISKCRH 457



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 7/142 (4%)

Query: 459 HAEALELYRTI--WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
           H E L LYR +  +GS    +  TF  V++ACAA++ L  GK +HC  ++  +  ++ V+
Sbjct: 125 HRELLGLYREVCAFGS----DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQ 180

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++DMY K G ++ ++R F  +    L  WNAM+ GY+ +GC  E +    +M + G +
Sbjct: 181 TALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFR 240

Query: 577 PDEITYLAVLTSCCHAGLVREA 598
           P+  + + +++     G VR+A
Sbjct: 241 PNASSLVGIVSMVSGLG-VRDA 261


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 209/666 (31%), Positives = 348/666 (52%), Gaps = 21/666 (3%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L++   +H   L  G  S   + +  I  YAK      A + F    + D V++  ++  
Sbjct: 26  LRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINA 85

Query: 154 YVWNGEFDKSKEVFVEMRSLGLE-----LNEFSLTAVLGASF---DVKEGEQIHGFGVKV 205
           +        S  V    R L +       N  +LT V  A+    D + G Q H   VK 
Sbjct: 86  FSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKT 145

Query: 206 GFLSGVCNH---LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVE 259
                 C+H     ++++N+Y + G   +A  +FDE+ E + VSW+  I+         E
Sbjct: 146 A-----CSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADE 200

Query: 260 AFGLFKDLRFNDF--QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           AF LFK +R  +     NE+   ++LS++    ++  G+Q+ +   K G + +VS+ NAL
Sbjct: 201 AFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANAL 260

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           ++MY KCG + DA   F+    K+S++W++M+ G+++ G  ++AL +F  M +   +P+ 
Sbjct: 261 VTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSE 320

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           +T+  ++ A S++ ++ +  Q+H + +K G+ L   ++S L+  Y KC ++ ++++    
Sbjct: 321 FTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFEC 380

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           I + + V   ++ +  V    +  AL LY  +       N  T + VLKAC+ +  L+QG
Sbjct: 381 IQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQG 440

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K +H   +K  +  +I + SA+  MY KCG+++D  R F ++    +  WNAM+ G +Q+
Sbjct: 441 KQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQN 500

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G  +E   LF KM   G KPD +T++ +L++C H GLV     Y   M D   + P +EH
Sbjct: 501 GRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEH 560

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC+VD+L R G L  AK  I+   +     +W+ LL+A   + + DLG  AG KL+EL 
Sbjct: 561 YACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELG 620

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
               S YVLLS++Y + G W DV ++R  MK + + KEPG SWI +   TH F  GD+ H
Sbjct: 621 SLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMH 680

Query: 738 SQSKEI 743
            Q  EI
Sbjct: 681 PQIDEI 686



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 280/567 (49%), Gaps = 30/567 (5%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLR-- 73
           ++ +LI+ + K + F +A   +FD+  N+D++++N LI+  ++     P+L +    R  
Sbjct: 47  IANSLINLYAKCSHFSKA-NLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQL 105

Query: 74  ---YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
              ++ + P+A T + +  A  +L ++      H + +K   S  V+  S  +  Y K+G
Sbjct: 106 VMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTG 165

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR--SLGLELNEFSLTAV 185
            +  A   F +  + + V++  M+ GY      D++ E+F  MR    G   NEF  T+V
Sbjct: 166 LVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSV 225

Query: 186 LGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L A      V  G Q+H   +K G +  V   + NA++ +YV+CG   DA+K F+     
Sbjct: 226 LSALTCYMLVNTGRQVHSLAMKNGLVCIVS--VANALVTMYVKCGSLEDALKTFELSGNK 283

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           + ++WS  +   A   D  +A  LF D+  +    +E+T++ ++++      +  G+Q+ 
Sbjct: 284 NSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMH 343

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
            +  K+G+   + + +AL+ MY KCG + DAR  F+ +   D V W S+I GY +NG + 
Sbjct: 344 GYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYE 403

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
            AL+++  M    +IPN  TMAS+L+A SN  +L Q  Q+H+ IIK  F L+  + S L 
Sbjct: 404 GALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALS 463

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC +L++  R+   +  ++ +  NA+ S L       E LEL+  +     + +  
Sbjct: 464 AMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNV 523

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-----VIDMYCKCGTIEDAKR 534
           TF  +L AC+ M  +++G     +  K  +D+     +      ++D+  + G + +AK 
Sbjct: 524 TFVNLLSACSHMGLVDRG----WVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKE 579

Query: 535 AFRKICRD-SLAGWNAMMMGYAQHGCY 560
                  D  L  W  ++     H  Y
Sbjct: 580 FIESATVDHGLCLWRILLAASKNHRDY 606



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 208/401 (51%), Gaps = 15/401 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q ++L +K     D   +++L++ + K      A R LFD    R+ +++  +ISG A  
Sbjct: 137 QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEA-RDLFDEMPERNAVSWATMISGYASQ 195

Query: 60  CQSGPALKLFDRLRYQ--GLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
             +  A +LF  +R++  G   + F F+S++ A      +     VH + +K G    V 
Sbjct: 196 ELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVS 255

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y K G +  A   F    + +++ ++AMV G+   G+ DK+ ++F +M   G
Sbjct: 256 VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSG 315

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              +EF+L  V+ A  D   + EG Q+HG+ +K+G+   +  ++ +A++++Y +CG  +D
Sbjct: 316 ELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQL--YVLSALVDMYAKCGSIVD 373

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K F+ I +PDVV W+  I       D   A  L+  ++      N+ TM ++L +   
Sbjct: 374 ARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSN 433

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GKQ+ A   K  F   + IG+AL +MY KCG ++D   IF  +  +D +SWN+M
Sbjct: 434 LAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAM 493

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           I+G S+NG  N+ L++F  M      P+  T  ++L A S+
Sbjct: 494 ISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSH 534



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 12/307 (3%)

Query: 371 FSLIPNGYTMASILEAV---SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
             L+P  +    +L A+   +  K L++   +H+ I+ +G      + + LI  Y KC+ 
Sbjct: 1   MPLLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSH 60

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL---ELYRTIWGSCREV--NGSTFS 482
            +++  V   I+ K+ V  N L +       HA +L    L+R +  + + +  N  T +
Sbjct: 61  FSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLT 120

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            V  A + ++D   G+  H LA+K     D+F  S++++MYCK G + +A+  F ++   
Sbjct: 121 GVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPER 180

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKM--SKFGVKPDEITYLAVLTSCCHAGLVREART 600
           +   W  M+ GYA      E   LF  M   + G   +E  + +VL++     LV   R 
Sbjct: 181 NAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQ 240

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
             S ++  +GL+  +     +V +  + G LE A  T  ++    ++  W ++++    +
Sbjct: 241 VHS-LAMKNGLVCIVSVANALVTMYVKCGSLEDALKTF-ELSGNKNSITWSAMVTGFAQF 298

Query: 661 GNIDLGL 667
           G+ D  L
Sbjct: 299 GDSDKAL 305



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 54/94 (57%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IK    L+  + + L + + K       +R  +    RD+I++NA+ISGL++  
Sbjct: 442 QMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNG 501

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           +    L+LF+++  +G +PD  TF +L+ AC  +
Sbjct: 502 RGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHM 535


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 203/695 (29%), Positives = 357/695 (51%), Gaps = 24/695 (3%)

Query: 73  RYQGLRPDAFTFSSL--VKACGSLQENEIVHGVCLKLGF-----SSRVYLVSGFIENYAK 125
           R Q   P  FT +S   +K+  +L E   +H + L LGF            S  +  Y  
Sbjct: 20  RQQHSLPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVN 79

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G +  A + FR       +A+ A++ G V  G F K+   +  M   G+  + ++   V
Sbjct: 80  FGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLV 139

Query: 186 LGASFDVKE-------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L A   +          E +HG        +    ++  A+++++ +CG   DA +MF+E
Sbjct: 140 LKACSSLHALQLGRWVHETMHG-------KTKANVYVQCAVIDMFAKCGSVEDARRMFEE 192

Query: 239 ITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + + D+ SW+  I       + +EA  LF+ +R      +   + ++L + G    ++ G
Sbjct: 193 MPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLG 252

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             +Q    + GF   + + NA+I MY KCG   +A  +F ++++ D VSW+++IAGYS+N
Sbjct: 253 MALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQN 312

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             + ++  ++  M+   L  N     S+L A+   + LKQ  ++H+ ++K G + D  + 
Sbjct: 313 CLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVG 372

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S LI  Y  C ++ E++ +      K+ +  N++            A   +R IWG+   
Sbjct: 373 SALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHR 432

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N  T   +L  C  M  L QGK IH    K+    ++ V +++IDMY KCG +E  ++ 
Sbjct: 433 PNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKV 492

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F+++   ++  +N M+     HG   +    + +M + G +P+++T++++L++C HAGL+
Sbjct: 493 FKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLL 552

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
                  + M + +G+ P +EHY+C+VDL+GR G L+GA   I +MP+ PDA+++ SLL 
Sbjct: 553 DRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLG 612

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++  ++L  L   ++L+L+ D+   YVLLSNLYAS   W D+ K+R  +K+K L K+
Sbjct: 613 ACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKK 672

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           PG SWI VG   + F+A  + H    +I + L  L
Sbjct: 673 PGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSL 707



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 243/494 (49%), Gaps = 20/494 (4%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
            ++ L++ +  F   + AF       ++ II +NA++ GL        A+  +  +   G
Sbjct: 69  FASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHG 128

Query: 77  LRPDAFTFSSLVKACGSLQE-------NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           + PD +T+  ++KAC SL         +E +HG        + VY+    I+ +AK G +
Sbjct: 129 VTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKT-----KANVYVQCAVIDMFAKCGSV 183

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL--- 186
             A   F +  D D  ++TA++CG +WNGE  ++  +F +MRS GL  +   + ++L   
Sbjct: 184 EDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPAC 243

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           G    VK G  +    V+ GF S +  +++NA++++Y +CG  L+A ++F  +   DVVS
Sbjct: 244 GRLEAVKLGMALQVCAVRSGFESDL--YVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVS 301

Query: 247 WSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  IA     C   E++ L+  +       N     ++L ++G   +L+ GK++  F  
Sbjct: 302 WSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVL 361

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K G M  V +G+ALI MY  CG + +A SIF+    KD + WNSMI GY+  G F  A  
Sbjct: 362 KEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFF 421

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            F  +      PN  T+ SIL   +   +L+Q  ++H ++ KSG  L+ S+ + LI  Y 
Sbjct: 422 TFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYS 481

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  L   ++V  ++  +N    N + S         + L  Y  +       N  TF  
Sbjct: 482 KCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFIS 541

Query: 484 VLKACAAMTDLEQG 497
           +L AC+    L++G
Sbjct: 542 LLSACSHAGLLDRG 555



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 21/303 (6%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +++G   D  +S  +I  + K  D   A R        D+++++ LI+G ++ C    + 
Sbjct: 260 VRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESY 319

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           KL+  +   GL  +A   +S++ A G L+   + + +H   LK G  S V + S  I  Y
Sbjct: 320 KLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMY 379

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           A  G I  AE  F    D D + + +M+ GY   G+F+ +   F   R  G E     +T
Sbjct: 380 ANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESA--FFTFRRIWGAEHRPNFIT 437

Query: 184 AV--------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            V        +GA   +++G++IHG+  K G   G+   + N+++++Y +CG      K+
Sbjct: 438 VVSILPICTQMGA---LRQGKEIHGYVTKSGL--GLNVSVGNSLIDMYSKCGFLELGEKV 492

Query: 236 FDEITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F ++   +V +++  I+A      G +    ++ ++    + N+ T I+LLS+     +L
Sbjct: 493 FKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLL 552

Query: 293 RAG 295
             G
Sbjct: 553 DRG 555



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ ++K G   D ++ + LI  +      + A      T ++DI+ +N++I G     
Sbjct: 355 EMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVG 414

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A   F R+     RP+  T  S++  C   G+L++ + +HG   K G    V + +
Sbjct: 415 DFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGN 474

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G +   E  F+  +  +   Y  M+     +G+ +K    + +M+  G   
Sbjct: 475 SLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRP 534

Query: 178 NEFSLTAVLGA 188
           N+ +  ++L A
Sbjct: 535 NKVTFISLLSA 545


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 213/673 (31%), Positives = 349/673 (51%), Gaps = 37/673 (5%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L    + H + +K G ++ +Y  +  I  YAK GEI  A   F +    D V++  M+ 
Sbjct: 14  ALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIA 73

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLS 209
           G V  G F+ + E    M+  G  ++ +S  ++L        V+ G+Q+H   VK+G+  
Sbjct: 74  GXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEG 133

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKD 266
            V     +A++++Y +C +  DA ++F  I   + V+W+  I   A   D   AF L   
Sbjct: 134 NV--FAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDC 191

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +     +I++ T   LL+ +    + +   Q+ A   K G     ++ NA+I+ Y +CG 
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251

Query: 327 VNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
           + DA  +FD  I  +D V+WNSM+A Y  N    +A ++F  M      P+ YT  S++ 
Sbjct: 252 IEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVIS 311

Query: 386 AVSNSKSLKQAMQVHSHIIKSG--FL--LDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           A        Q   +H  +IK G  FL  + +S+I+  + ++ K  +++E+  +   ++ K
Sbjct: 312 AAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSK--SMDEALNIFESLENK 369

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           + V  N++ +    +    +AL+ +  +      ++   FS VL++C+ +  L+ G+ +H
Sbjct: 370 DHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH 429

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
            L                      CG IEDA+++F    +DS   WN+++ GYAQHG   
Sbjct: 430 VL----------------------CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGK 467

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
              +LF  M    VK D IT++AVLT+C H GLV E  ++L  M   +G+ P++EHYAC+
Sbjct: 468 IALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACM 527

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           +DLLGR G L+ AK  I+ MP  PDA +W++LL AC   G+I+L     S LLEL+P+  
Sbjct: 528 IDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEH 587

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSK 741
            TYVLLS+++     WN+   +++ MKE+ + K PG+SWI V    H F A D SH   +
Sbjct: 588 CTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRSHPNCE 647

Query: 742 EIYKELIKLYEHM 754
           EIY  L  L E +
Sbjct: 648 EIYLRLGDLMEEI 660



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 263/548 (47%), Gaps = 49/548 (8%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           L IK+G       +  +IS + K  + R A +   +T  RD +++N +I+G   F     
Sbjct: 24  LAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFET 83

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVK--AC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL+    ++  G   D ++F S++K  AC G ++  + VH + +K+G+   V+  S  ++
Sbjct: 84  ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLD 143

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YAK   +  A   F+     ++V + A++ GY   G+   +  +   M   G+E+++ +
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGT 203

Query: 182 LTAVLGASFDV---KEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMF 236
              +L    D    K   Q+H   VK G  S   VC    NAI+  Y  CG   DA ++F
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVC----NAIITAYSECGSIEDAERVF 259

Query: 237 DEITEP-DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           D   E  D+V+W+  +AA        EAF LF +++   F+ + YT  +++S+       
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQ 319

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGK--CGQVNDARSIFDYLIFKDSVSWNSMIA 350
             GK +     K G   +V I N+LI+MY K     +++A +IF+ L  KD VSWNS++ 
Sbjct: 320 GQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILT 379

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+S++G    AL  F +M    ++ + Y  +++L + S+  +L+   QVH          
Sbjct: 380 GFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHV--------- 430

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYR 467
                         C  + ++++      K +++  N+L  +  YA  H     AL+L+ 
Sbjct: 431 -------------LCGVIEDARKSFDATPKDSSIAWNSL--IFGYAQ-HGRGKIALDLFF 474

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +     +++  TF  VL AC+ +  +E+G +    ++++ Y     +E  + +ID+  +
Sbjct: 475 LMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF-LKSMESDYGIPPRMEHYACMIDLLGR 533

Query: 526 CGTIEDAK 533
            G +++AK
Sbjct: 534 AGRLDEAK 541



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 218/451 (48%), Gaps = 43/451 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S+++K G+  +    + L+  + K      AF        R+ +T+NALISG A   
Sbjct: 121 QVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVG 180

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G A  L D +  +G+  D  TF+ L+        +++   VH   +K G +S   + +
Sbjct: 181 DRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I  Y++ G I  AE  F   ++  D V + +M+  Y+ N + +++ E+F+EM+ LG E
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFE 300

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKL- 230
            + ++ T+V+ A+F+     +G+ +HG  +K G  FL  +    +N+++ +Y++   K  
Sbjct: 301 PDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPI----SNSLIAMYLKSHSKSM 356

Query: 231 -DAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A+ +F+ +   D VSW+  +   +  G+  +A   F+++R     I+ Y    +L S 
Sbjct: 357 DEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSC 416

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L+ G+Q+                         CG + DAR  FD      S++WN
Sbjct: 417 SDLATLQLGQQVHVL----------------------CGVIEDARKSFDATPKDSSIAWN 454

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I GY+++G    ALD+F  M +  +  +  T  ++L A S+   +++        ++S
Sbjct: 455 SLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKS-MES 513

Query: 407 GFLLDDSM--ISCLITTYGKCNALNESKRVL 435
            + +   M   +C+I   G+   L+E+K ++
Sbjct: 514 DYGIPPRMEHYACMIDLLGRAGRLDEAKALI 544



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 23/280 (8%)

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S+  +L +A   H   IKSG        + +I+ Y KC  +  + ++  E  +++AV  N
Sbjct: 10  SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWN 69

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            + +  V       ALE  +++      V+G +F  +LK  A +  +E G+ +H + +K 
Sbjct: 70  TMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKI 129

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            Y+ ++F  SA++DMY KC  +EDA   F+ I   +   WNA++ GYA  G       L 
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLL 189

Query: 568 NKMSKFGVKPDEITYLAV-----------LTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           + M   GV+ D+ T+  +           LT+  HA +V+            HGL     
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK------------HGLASDTT 237

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
               I+      G +E A+   D      D   W S+L+A
Sbjct: 238 VCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAA 277


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 223/714 (31%), Positives = 359/714 (50%), Gaps = 68/714 (9%)

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
           F S   L +G + +Y   G    A +          V +  ++  ++  G  D +  V  
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 169 EMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
            M   G  L+ F+L  VL A  ++     G   HG     GF S V   + NA++ +Y R
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV--FICNALVAMYSR 164

Query: 226 CGQKLDAVKMFDEITE---PDVVSWSERIAA---ACDGVEAFGLFKDLRF--NDFQINE- 276
           CG   +A  +FDEIT+    DV+SW+  ++A   + +   A  LF  +    ++   NE 
Sbjct: 165 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 224

Query: 277 ---YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
               +++N+L + G  + +   K++     + G    V +GNALI  Y KCG + +A  +
Sbjct: 225 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKV 284

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFF----------------------------------- 358
           F+ + FKD VSWN+M+AGYS++G F                                   
Sbjct: 285 FNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 344

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL-------- 410
           ++AL++F  M+    +PN  T+ S+L A ++  +  Q M++H++ +K+  L         
Sbjct: 345 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 404

Query: 411 -DDSMI-SCLITTYGKCNALNESKRVLSEI--DKKNAVHINALASVLVYASCHAEALELY 466
            +D M+ + LI  Y KC +   ++ +  +I  +++N V    +           +AL+L+
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 464

Query: 467 RTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDI-FVESAVIDM 522
             +      V  N  T S +L ACA +  +  GK IH   L+  +YD    FV + +I+M
Sbjct: 465 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG ++ A+  F  + + S   W +MM GY  HG   E  ++F+KM K G  PD+IT+
Sbjct: 525 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 584

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           L VL +C H G+V +  +Y   MS  +GL P+ EHYA  +DLL R G L+ A  T+  MP
Sbjct: 585 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 644

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           + P A +W +LLSAC ++ N++L   A +KL+E+  +N+ +Y L+SN+YA+AG W DV +
Sbjct: 645 MEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVAR 704

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           +R  MK+  + K PG SW+     T  F+ GD SH  S +IY  L  L + + A
Sbjct: 705 IRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 758



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/605 (23%), Positives = 275/605 (45%), Gaps = 77/605 (12%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGV 103
           + +N LI    +  +   A+ +  R+   G R D FT   ++KACG L         HG+
Sbjct: 83  VWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGL 142

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEF 160
               GF S V++ +  +  Y++ G +  A M F +       D +++ ++V  +V +   
Sbjct: 143 ICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNA 202

Query: 161 DKSKEVFVEMRSLGLE--LNE----FSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGV 211
             + ++F +M  +  E   NE     S+  +L A   +K   + +++HG  ++ G    V
Sbjct: 203 WTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 262

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLR 268
              + NA+++ Y +CG   +AVK+F+ +   DVVSW+  +A    + +   AF LFK++R
Sbjct: 263 --FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMR 320

Query: 269 FNDFQI-----------------------------------NEYTMINLLSSVGGERILR 293
             +  +                                   N  T+I++LS+        
Sbjct: 321 KENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFS 380

Query: 294 AGKQIQAFCYKV----------GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF--KD 341
            G +I A+  K           G  E + + NALI MY KC     ARSIFD +    ++
Sbjct: 381 QGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 440

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            V+W  MI G+++ G  N AL +F  M+   + + PN YT++ IL A ++  +++   Q+
Sbjct: 441 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 500

Query: 400 HSHIIKSGFLLDDS---MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           H+++++     D S   + +CLI  Y KC  ++ ++ V   + +K+A+   ++ +     
Sbjct: 501 HAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 559

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
              +EAL+++  +  +    +  TF +VL AC+    ++QG + +  ++ A Y      E
Sbjct: 560 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS-YFDSMSADYGLTPRAE 618

Query: 517 --SAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
             +  ID+  + G ++ A +  + +  +  A  W A++     H       +  NK+ + 
Sbjct: 619 HYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 678

Query: 574 GVKPD 578
             + D
Sbjct: 679 NAEND 683



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 212/463 (45%), Gaps = 67/463 (14%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR---DIITYNALISGLARF 59
           + L+  NG   +  +   L++ +++      A     +   R   D+I++N+++S   + 
Sbjct: 140 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 199

Query: 60  CQSGPALKLFDRL------RYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFS 110
             +  AL LF ++      +    R D  +  +++ ACGSL+   + + VHG  ++ G  
Sbjct: 200 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 259

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             V++ +  I+ YAK G + +A   F      D V++ AMV GY  +G F  + E+F  M
Sbjct: 260 LDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNM 319

Query: 171 RSLGLELNEFSLTAVL------GASFDV-------------------------------- 192
           R   + L+  + TAV+      G S +                                 
Sbjct: 320 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAF 379

Query: 193 KEGEQIHGFGVKVGFLS------GVCNHLN--NAIMNLYVRCGQKLDAVKMFDEIT--EP 242
            +G +IH + +K   L+      G    L   NA++++Y +C     A  +FD+I   E 
Sbjct: 380 SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 439

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQ 297
           +VV+W+  I   A   D  +A  LF ++    + +  N YT+  +L +      +R GKQ
Sbjct: 440 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 499

Query: 298 IQAFCYKVGFMEVVS--IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           I A+  +    +  +  + N LI+MY KCG V+ AR +FD +  K ++SW SM+ GY  +
Sbjct: 500 IHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 559

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           G  ++ALD+F  M +   +P+  T   +L A S+   + Q + 
Sbjct: 560 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 602



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 134/299 (44%), Gaps = 22/299 (7%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDT---QNRDIITYNALISGLARFCQSGPAL 66
           G   D ++   LI  ++K   F+ A R +FD    + R+++T+  +I G A++  S  AL
Sbjct: 403 GEDEDLMVYNALIDMYSKCRSFKAA-RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDAL 461

Query: 67  KLFDRLRYQ--GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKL-GFSSRVYLVSG-F 119
           KLF  +  +  G+ P+A+T S ++ AC  L    I   +H   L+   + S  Y V+   
Sbjct: 462 KLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL 521

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y+K G++ +A   F        +++T+M+ GY  +G   ++ ++F +MR  G   ++
Sbjct: 522 INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 581

Query: 180 FSLTAVLGASFDVKEGEQ----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            +   VL A       +Q            G L+    H   AI +L  R G+   A K 
Sbjct: 582 ITFLVVLYACSHCGMVDQGLSYFDSMSADYG-LTPRAEHYAYAI-DLLARFGRLDKAWKT 639

Query: 236 FDEIT-EPDVVSWSERIAA--ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             ++  EP  V W   ++A      VE     L K +  N      YT+I+ + +  G 
Sbjct: 640 VKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGR 698



 Score = 43.1 bits (100), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 1   QIYSLLIKNGHHLDP---ILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGL 56
           QI++ ++++ H  D     ++  LI+ ++K  D   A R +FD+ + +  I++ ++++G 
Sbjct: 499 QIHAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDTA-RHVFDSMSQKSAISWTSMMTGY 556

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               +   AL +FD++R  G  PD  TF  ++ AC
Sbjct: 557 GMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 591


>gi|449451906|ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 213/730 (29%), Positives = 367/730 (50%), Gaps = 10/730 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + K G   D      L+  + +       F+   +   R++++++ +IS L+   
Sbjct: 33  QVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVFEEMPQRNVVSWSLIISSLSENG 92

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV-CL--KLGFSSRVYLVS 117
           +    L+ F  +   GL P  F F S++KAC  ++      GV CL  K+G    V++  
Sbjct: 93  EFELCLESFLEMMRDGLMPTEFAFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNVFVGG 152

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+ G+I SAE+ F     +D   + AM+ GY   G   ++      + S G+++
Sbjct: 153 STLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGYTHCGLGLEALNAVSLLNSEGIKM 212

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F++ + + A     D+  G+++HGF ++ G +S       NA+M++Y+   +K   +K
Sbjct: 213 DNFTIVSAVKACSLIQDLDSGKELHGFILRRGLISTAAM---NALMDMYLISDRKNSVLK 269

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           +F+ +   D++SW+     + +  E   LF        + N  T   L    G     R 
Sbjct: 270 IFNSMQTRDIISWNTVFGGSSNEKEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRL 329

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G Q  +    +GF++   + +++ISM+ + G +    S+FD L+FK   +WN  I  YS 
Sbjct: 330 GFQFFSLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSS 389

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           N F  +A   F  +L + ++ N YT + I+E     ++     Q+H   +K+GF     +
Sbjct: 390 NSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCRQLHCASMKAGFGSHKYV 449

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
              LI  Y    +L  S  + ++++  +     A+ S LV+ +   EA+     +  S +
Sbjct: 450 SCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNYMYEAIMFLNFLMESGK 509

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + +  TF  +L  C++     Q KAIH L  K  +   + V SA+ID Y KCG I  A+ 
Sbjct: 510 KPDEFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQG 569

Query: 535 AFRKICR-DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           AF + C+ + +  +N+MMM YA HG   E    F KM    V+P + ++++V+++C H G
Sbjct: 570 AFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACRHMG 629

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV + R+    M   + + P  ++Y C+VD+L R G L  A+  I+ MP  P   I +SL
Sbjct: 630 LVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSL 689

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           LS C IYGN++LG     KLL L P N +T+VLLS +Y+    W D   +RKEM ++ + 
Sbjct: 690 LSGCRIYGNVELGQWTAEKLLSLAPQNLATHVLLSKVYSEGNSWEDAANIRKEMTDRGVL 749

Query: 714 KEPGYSWIHV 723
           K+PGYS + +
Sbjct: 750 KDPGYSRVEI 759



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 137/611 (22%), Positives = 262/611 (42%), Gaps = 29/611 (4%)

Query: 61  QSGPALKLFDRLRYQGLRPDAF-TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
           Q+ PAL         G  P    T  SL +   SL     VHG   KLGF    + ++  
Sbjct: 3   QNKPAL---------GRDPKTIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNL 53

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ Y + G +      F +    + V+++ ++     NGEF+   E F+EM   GL   E
Sbjct: 54  LKMYFRCGFMCEGFKVFEEMPQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTE 113

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+  +V+ A  DV+    G  +H    K+G    V   +  + +++Y R G    A  +F
Sbjct: 114 FAFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNV--FVGGSTLSMYARLGDITSAELVF 171

Query: 237 DEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           + + + DV  W+  I        G+EA      L     +++ +T+++ + +    + L 
Sbjct: 172 EWMEKVDVGCWNAMIGGYTHCGLGLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLD 231

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
           +GK++  F  + G +   ++ NAL+ MY    + N    IF+ +  +D +SWN++  G S
Sbjct: 232 SGKELHGFILRRGLISTAAM-NALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGGSS 290

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
                 + +D+F   +   + PN  T + +          +   Q  S  +  GFL +  
Sbjct: 291 NE---KEIVDLFGKFVIEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETR 347

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           ++S +I+ + +   +     V   +  K     N    +L Y+S   E +E +RT     
Sbjct: 348 VLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQF--ILAYSSNSFE-MEAFRTFSSLL 404

Query: 474 RE---VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           R     N  TFSI+++      +    + +HC ++KA +    +V  ++I  Y   G++E
Sbjct: 405 RYGVVANEYTFSIIIETACKFENPWMCRQLHCASMKAGFGSHKYVSCSLIKCYILIGSLE 464

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            +   F ++    +A + A++         +E     N + + G KPDE T+ ++L  C 
Sbjct: 465 SSFEIFNQLEIVDMATYGAVISTLVHQNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCS 524

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
                 + +   S +  + G    +   + I+D   + G +  A+   +Q     D  ++
Sbjct: 525 SRAAYHQTKAIHSLVEKM-GFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVY 583

Query: 651 QSLLSACTIYG 661
            S++ A   +G
Sbjct: 584 NSMMMAYAHHG 594



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 11/193 (5%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T +  L        L  G  +H    K  +D D F  + ++ MY +CG + +  + F ++
Sbjct: 14  TIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVFEEM 73

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
            + ++  W+ ++   +++G +      F +M + G+ P E  + +V+ +C       EA 
Sbjct: 74  PQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADV----EAY 129

Query: 600 TYLS---CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            + S   C+S   G+   +      + +  R+G +  A++  + M    D   W +++  
Sbjct: 130 GFGSGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWME-KVDVGCWNAMIGG 188

Query: 657 CTIYGNIDLGLLA 669
              Y +  LGL A
Sbjct: 189 ---YTHCGLGLEA 198


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 205/636 (32%), Positives = 311/636 (48%), Gaps = 75/636 (11%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           + +  Q H   +K G  +    HL   +++ Y       DA  + D + EP+V S+S  I
Sbjct: 29  LSQTRQAHAHILKTGLFNDT--HLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 252 AAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
            A     +   A   F  +       +   + + + +  G   L+  +Q+       GF 
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW----------------------- 345
               + ++L+ MY KC Q+ DA  +FD +   D VSW                       
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 346 ------------NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
                       N MIAG++ +G +++A+ MF  M      P+G T++S+L AV + + L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-------------- 439
              + +H ++IK G + D  + S LI  YGKC+  +E  +V  ++D              
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 440 ----------------KKNAVHINALASVLVYASCHA-----EALELYRTIWGSCREVNG 478
                           K   + +N ++   + A C       EALEL+R +  +  + N 
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNS 386

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   +L AC  +  L  GKA HC +L+     D++V SA+IDMY KCG I+ ++  F  
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           I   +L  WNA++ GYA HG   E   +F+ M + G KPD I++  VL++C  +GL  E 
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             Y + MS  +G+  ++EHYAC+V LL R G LE A   I +MP+ PDA +W +LLS+C 
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCR 566

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ N+ LG +A  KL EL+P N   Y+LLSN+YAS GMWN+V ++R  MK K L K PG 
Sbjct: 567 VHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGC 626

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           SWI V    H   AGD SH Q  +I ++L KL   M
Sbjct: 627 SWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEM 662



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 210/469 (44%), Gaps = 81/469 (17%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++K G   D  L+T L+SH+     F  A   L      ++ +++ LI   ++F 
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   AL  F ++  +GL PD     S VKAC    +L+    VHG+    GF S  ++ S
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K  +I  A   F    + D V+++A+V  Y   G  D++K +F EM   G++ 
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 178 NEFS-----------------------------------LTAVLGASFDVKE---GEQIH 199
           N  S                                   +++VL A  D+++   G  IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRC-------------------------------GQ 228
           G+ +K G +S  C  +++A++++Y +C                               GQ
Sbjct: 274 GYVIKQGLVSDKC--VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQ 331

Query: 229 KLDAVKMF----DEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMIN 281
              ++++F    D+  E +VVSW+  IA        +EA  LF++++    + N  T+  
Sbjct: 332 VESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPC 391

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LL + G    L  GK    F  + G    V +G+ALI MY KCG++  +R  FD +  K+
Sbjct: 392 LLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN 451

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            V WN++IAGY+ +G   +A+++F  M      P+  +   +L A S S
Sbjct: 452 LVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 245/576 (42%), Gaps = 103/576 (17%)

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           S  AL L D +++         F+ L     SL +    H   LK G  +  +L +  + 
Sbjct: 4   SAQALALLDSVQHT-------IFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLS 56

Query: 122 NYAKSGEIVSAEMCFRDC---LDL---DNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +YA +       MCF D    LDL    NV +++ ++  +    +F  +   F +M + G
Sbjct: 57  HYANN-------MCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRG 109

Query: 175 LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           L  +   L + + A   +   K   Q+HG     GF S   + + ++++++Y++C Q  D
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD--SFVQSSLVHMYIKCNQIRD 167

Query: 232 AVKMFDEITEPDVVSWSERIAA----AC-------------DGV---------------- 258
           A ++FD + EPDVVSWS  +AA     C              GV                
Sbjct: 168 AHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNH 227

Query: 259 -----EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
                EA  +F D+    F+ +  T+ ++L +VG    L  G  I  +  K G +    +
Sbjct: 228 SGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCV 287

Query: 314 GNALISMYGKCGQVNDARSIFDYL-----------IF------------------KDS-- 342
            +ALI MYGKC   ++   +FD +           IF                  KD   
Sbjct: 288 SSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGM 347

Query: 343 ----VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
               VSW SMIA  S+NG   +AL++F  M    + PN  T+  +L A  N  +L     
Sbjct: 348 ELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKA 407

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            H   ++ G   D  + S LI  Y KC  +  S+     I  KN V  NA+ +       
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-- 516
             EA+E++  +  S ++ +  +F+ VL AC+     E+G + +  ++ ++Y  +  VE  
Sbjct: 468 AKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG-SYYFNSMSSKYGIEARVEHY 526

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
           + ++ +  + G +E A    R++  +  A  W A++
Sbjct: 527 ACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 8/253 (3%)

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S + SL Q  Q H+HI+K+G   D  + + L++ Y       ++  VL  + + N    +
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83

Query: 448 ALASVLVYASCHA--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            L  +  ++  H    AL  +  +       +       +KACA ++ L+  + +H +A 
Sbjct: 84  TL--IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
            + +D D FV+S+++ MY KC  I DA R F ++    +  W+A++  YA+ GC  E   
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKR 201

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF++M   GV+P+ I++  ++    H+GL  EA      M  L G  P       I  +L
Sbjct: 202 LFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEPD---GTTISSVL 257

Query: 626 GRVGLLEGAKMTI 638
             VG LE   M I
Sbjct: 258 PAVGDLEDLVMGI 270


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 205/636 (32%), Positives = 310/636 (48%), Gaps = 75/636 (11%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           + +  Q H   +K G  +    HL   +++ Y       DA  + D + EP+V S+S  I
Sbjct: 29  LSQTRQAHAHILKTGLFNDT--HLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLI 86

Query: 252 AAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
            A     +   A   F  +       +   + + + +  G   L+  +Q+       GF 
Sbjct: 87  YAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFD 146

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW----------------------- 345
               + ++L+ MY KC Q+ DA  +FD +   D VSW                       
Sbjct: 147 SDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEM 206

Query: 346 ------------NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
                       N MIAG++ +G +++A+ MF  M      P+G T++S+L AV + + L
Sbjct: 207 GDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDL 266

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-------------- 439
              + +H ++IK G + D  + S LI  YGKC+  +E  +V  ++D              
Sbjct: 267 VMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 440 ----------------KKNAVHINALASVLVYASCHA-----EALELYRTIWGSCREVNG 478
                           K   + +N ++   + A C       EALEL+R +  +  + N 
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNS 386

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   +L AC  +  L  GKA HC +L+     D++V SA+IDMY KCG I+ ++  F  
Sbjct: 387 VTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDG 446

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           I   +L  WNA++ GYA HG   E   +F+ M + G KPD I++  VL++C  +GL  E 
Sbjct: 447 IPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG 506

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             Y + MS  +G+  ++EHYAC+V LL R G LE A   I +MP+ PDA +W +LLS+C 
Sbjct: 507 SYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCR 566

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ N+ LG +A  KL EL+P N   Y+LLSN+YAS GMWN+V ++R  MK K L K PG 
Sbjct: 567 VHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGC 626

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           SWI V    H   AGD SH Q  +I + L KL   M
Sbjct: 627 SWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEM 662



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 210/469 (44%), Gaps = 81/469 (17%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++K G   D  L+T L+SH+     F  A   L      ++ +++ LI   ++F 
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   AL  F ++  +GL PD     S VKAC    +L+    VHG+    GF S  ++ S
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K  +I  A   F    + D V+++A+V  Y   G  D++K +F EM   G++ 
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 178 NEFS-----------------------------------LTAVLGASFDVKE---GEQIH 199
           N  S                                   +++VL A  D+++   G  IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRC-------------------------------GQ 228
           G+ +K G +S  C  +++A++++Y +C                               GQ
Sbjct: 274 GYVIKQGLVSDKC--VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQ 331

Query: 229 KLDAVKMF----DEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMIN 281
              ++++F    D+  E +VVSW+  IA        +EA  LF++++    + N  T+  
Sbjct: 332 VESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPC 391

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LL + G    L  GK    F  + G    V +G+ALI MY KCG++  +R  FD +  K+
Sbjct: 392 LLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN 451

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            V WN++IAGY+ +G   +A+++F  M      P+  +   +L A S S
Sbjct: 452 LVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 245/576 (42%), Gaps = 103/576 (17%)

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           S  AL L D +++  L       + L     SL +    H   LK G  +  +L +  + 
Sbjct: 4   SAQALALLDSVQHTIL-------NCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLS 56

Query: 122 NYAKSGEIVSAEMCFRDC---LDL---DNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +YA +       MCF D    LDL    NV +++ ++  +    +F  +   F +M + G
Sbjct: 57  HYANN-------MCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRG 109

Query: 175 LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           L  +   L + + A   +   K   Q+HG     GF S   + + ++++++Y++C Q  D
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD--SFVQSSLVHMYIKCNQIRD 167

Query: 232 AVKMFDEITEPDVVSWSERIAA----AC-------------DGV---------------- 258
           A ++FD + EPDVVSWS  +AA     C              GV                
Sbjct: 168 AHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNH 227

Query: 259 -----EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
                EA  +F D+    F+ +  T+ ++L +VG    L  G  I  +  K G +    +
Sbjct: 228 SGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCV 287

Query: 314 GNALISMYGKCGQVNDARSIFDYL-----------IF------------------KDS-- 342
            +ALI MYGKC   ++   +FD +           IF                  KD   
Sbjct: 288 SSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGM 347

Query: 343 ----VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
               VSW SMIA  S+NG   +AL++F  M    + PN  T+  +L A  N  +L     
Sbjct: 348 ELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKA 407

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            H   ++ G   D  + S LI  Y KC  +  S+     I  KN V  NA+ +       
Sbjct: 408 AHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGK 467

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-- 516
             EA+E++  +  S ++ +  +F+ VL AC+     E+G + +  ++ ++Y  +  VE  
Sbjct: 468 AKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEG-SYYFNSMSSKYGIEARVEHY 526

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
           + ++ +  + G +E A    R++  +  A  W A++
Sbjct: 527 ACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 121/253 (47%), Gaps = 8/253 (3%)

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S + SL Q  Q H+HI+K+G   D  + + L++ Y       ++  VL  + + N    +
Sbjct: 24  STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83

Query: 448 ALASVLVYASCHA--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            L  +  ++  H    AL  +  +       +       +KACA ++ L+  + +H +A 
Sbjct: 84  TL--IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
            + +D D FV+S+++ MY KC  I DA R F ++    +  W+A++  YA+ GC  E   
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKR 201

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF++M   GV+P+ I++  ++    H+GL  EA      M  L G  P       I  +L
Sbjct: 202 LFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM-HLRGFEPD---GTTISSVL 257

Query: 626 GRVGLLEGAKMTI 638
             VG LE   M I
Sbjct: 258 PAVGDLEDLVMGI 270


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 208/653 (31%), Positives = 362/653 (55%), Gaps = 19/653 (2%)

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGYVWNGEFDKSKEVFVEMR- 171
           L++  I  Y+KS + ++A   F+   +   D V+Y++++  +  N    K+ E+F ++  
Sbjct: 89  LLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148

Query: 172 SLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFL-SGVCNHLNNAIMNLYVRCG 227
             G+  NE+  TAV+ A       K G  + GF +K G+  S VC  +   +++++V+  
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVC--VGCELIDMFVKGC 206

Query: 228 QKLD---AVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFND-FQINEYTMI 280
              D   A K+FD++ E +VV+W+    R+A      EA  LF ++  +  +  + +T+ 
Sbjct: 207 SLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLT 266

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            L+S     + L  GK++ ++  + G +  + +G +L+ MY KCG V +AR +FD +   
Sbjct: 267 GLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREH 326

Query: 341 DSVSWNSMIAGYSENG--FFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAM 397
           + +SW +++ GY   G  +  +A+ MF +ML +  + PN +T + +L+A ++        
Sbjct: 327 NVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGE 386

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           QVH   IK G    D + + L++ Y K   +  +++    + +KN V    +    V   
Sbjct: 387 QVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDF 446

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
                 +L R +      V+  T++ +L   A +  + +G+ IH + +K  +  D+ V +
Sbjct: 447 NLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNN 506

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+I MY KCG  E A + F  +   ++  W +++ G+A+HG   +   LF  M + GVKP
Sbjct: 507 ALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKP 566

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           +++TY+AVL++C H GL+ EA  + + M D HG++P++EHYAC+VDLLGR GLL  A   
Sbjct: 567 NDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEF 626

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           I+ MP   DA +W++ L +C ++ N  LG  A   +LE +P + +TY+LLSNLYA+ G W
Sbjct: 627 INSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRW 686

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            DV  +RK MK+K + KE G SWI V    H F+ GD+ H ++++IY++L +L
Sbjct: 687 EDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDEL 739



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 245/497 (49%), Gaps = 22/497 (4%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARFCQSGPALKLFD 70
           LD +L  +LI+ ++K  D   AF      +N  RD+++Y+++IS  A       A+++FD
Sbjct: 85  LDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFD 144

Query: 71  RLRYQ-GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG-FSSRVYLVSGFIENYAK 125
           +L  Q G+ P+ + F+++++AC   G  +    + G  LK G F S V +    I+ + K
Sbjct: 145 QLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVK 204

Query: 126 S---GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFS 181
                ++ SA   F    + + V +T M+      G  D++ ++F+EM  S G   + F+
Sbjct: 205 GCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFT 264

Query: 182 LTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           LT ++    +++    G+++H + ++ G +  +C  +  +++++Y +CG   +A K+FD 
Sbjct: 265 LTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLC--VGCSLVDMYAKCGLVQEARKVFDG 322

Query: 239 ITEPDVVSWSERIAAACDG-----VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERIL 292
           + E +V+SW+  +     G      EA  +F ++        N +T   +L +       
Sbjct: 323 MREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDF 382

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+Q+     K+G   +  +GN L+S+Y K G++  AR  FD L  K+ VS   +    
Sbjct: 383 DFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN 442

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            ++   N   D+   +       + +T AS+L   +   ++ +  Q+H+ ++K GF  D 
Sbjct: 443 VKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDL 502

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           S+ + LI+ Y KC     + +V ++++  N +   ++ +        ++ALEL+  +  +
Sbjct: 503 SVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET 562

Query: 473 CREVNGSTFSIVLKACA 489
             + N  T+  VL AC+
Sbjct: 563 GVKPNDVTYIAVLSACS 579



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 189/364 (51%), Gaps = 16/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S +I++G  LD  +  +L+  + K    + A +     +  +++++ AL++G  R  
Sbjct: 283 ELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGG 342

Query: 61  --QSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
                 A+++F  +  QG + P+ FTFS ++KAC SL +    E VHG  +KLG S+   
Sbjct: 343 GGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDC 402

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +G +  YAKSG + SA  CF    + + V+ T +    V +   +  +++  E+  +G
Sbjct: 403 VGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVG 462

Query: 175 LELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             ++ F+  ++L  +     + +GEQIH   VK+GF + +   +NNA++++Y +CG K  
Sbjct: 463 SGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS--VNNALISMYSKCGNKEA 520

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+++F+++ + +V++W+  I   A      +A  LF ++     + N+ T I +LS+   
Sbjct: 521 ALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSH 580

Query: 289 ERIL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             ++  A K   +     G +  +     ++ + G+ G +++A    + + F  D++ W 
Sbjct: 581 VGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWR 640

Query: 347 SMIA 350
           + + 
Sbjct: 641 TFLG 644


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 214/677 (31%), Positives = 357/677 (52%), Gaps = 8/677 (1%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           F+ + ++C ++   + +H + L LG +  V L++  +  YA  G++  +   F+     +
Sbjct: 54  FNLVFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVLGASFDVKEGEQIHGFG 202
             ++ +MV  YV  G +  S +   E+ SL G+  + ++   VL A   + +GE++H + 
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWV 173

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VE 259
           +K+GF   V  ++  ++++LY R G    A K+F ++   DV SW+  I+  C      E
Sbjct: 174 LKMGFEHDV--YVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAE 231

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  +   ++  + +++  T+ ++L        +  G  +  +  K G    V + NALI+
Sbjct: 232 ALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALIN 291

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY K G++ DA+ +FD +  +D VSWNS+IA Y +N     AL  F  ML   + P+  T
Sbjct: 292 MYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLT 351

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEI 438
           + S+          +    VH  +++  +L  D +I + L+  Y K  +++ ++ V  ++
Sbjct: 352 VVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQL 411

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIW-GSCREVNGSTFSIVLKACAAMTDLEQG 497
             ++ +  N L +        +EA++ Y  +  G     N  T+  +L A + +  L+QG
Sbjct: 412 PSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQG 471

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             IH   +K     D+FV + +IDMY KCG +EDA   F +I +++   WNA++     H
Sbjct: 472 MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIH 531

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   +   LF  M   GVK D IT++++L++C H+GLV EA+     M   + + P L+H
Sbjct: 532 GHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKH 591

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDL GR G LE A   +  MPI  DA IW +LL+AC I+GN +LG  A  +LLE+ 
Sbjct: 592 YGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVD 651

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
            +N   YVLLSN+YA+ G W    K+R   +++ L K PG+S + VG     FYAG+ SH
Sbjct: 652 SENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSH 711

Query: 738 SQSKEIYKELIKLYEHM 754
            Q  EIY+EL  L   M
Sbjct: 712 PQCAEIYEELRVLNAKM 728



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 297/542 (54%), Gaps = 12/542 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++LL+  G   D +L T L++ +    D   +       Q ++I ++N+++S   R  
Sbjct: 69  QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRG 128

Query: 61  QSGPALK-LFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
           +   ++  + + L   G+RPD +TF  ++KAC SL + E +H   LK+GF   VY+ +  
Sbjct: 129 RYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASL 188

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y++ G +  A   F D    D  ++ AM+ G+  NG   ++  V   M++  ++++ 
Sbjct: 189 IHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDT 248

Query: 180 FSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +++++L     S DV  G  +H + +K G  S V   ++NA++N+Y + G+  DA ++F
Sbjct: 249 VTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDV--FVSNALINMYSKFGRLQDAQRVF 306

Query: 237 DEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D +   D+VSW+  IAA     D V A G FK++ F   + +  T+++L S  G     R
Sbjct: 307 DGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRR 366

Query: 294 AGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
            G+ +  F  +  ++EV + IGNAL++MY K G ++ AR++F+ L  +D +SWN++I GY
Sbjct: 367 IGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGY 426

Query: 353 SENGFFNQALDMFCHMLE-FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++NG  ++A+D +  M E  +++PN  T  SIL A S+  +L+Q M++H  +IK+   LD
Sbjct: 427 AQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLD 486

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + +CLI  YGKC  L ++  +  EI ++ +V  NA+ S L       +AL+L++ +  
Sbjct: 487 VFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRA 546

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
              + +  TF  +L AC+    +++ +     +  + R   ++     ++D++ + G +E
Sbjct: 547 DGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLE 606

Query: 531 DA 532
            A
Sbjct: 607 KA 608


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 207/626 (33%), Positives = 337/626 (53%), Gaps = 18/626 (2%)

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K GF+  VYL + F++ Y K G I  A+  F +    D V++ A++CGY  NG    + E
Sbjct: 81  KSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALE 140

Query: 166 VFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           VFV+M   G    + +L  ++   G    + +G+ IHGFG+K G L   C  + NA+ ++
Sbjct: 141 VFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSG-LDLDC-RVKNALTSM 198

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTM 279
           Y +C     A  +F+EI E   VSW+  I A   +G+  EA  +FK ++    ++N  T+
Sbjct: 199 YAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTI 258

Query: 280 INLLSSVGGERILRAGKQIQAFCY--KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           I+LLS+                CY  K GF    S+  +L+  Y  CG +  A  +++ +
Sbjct: 259 ISLLSA--------NAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLM 310

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             ++ VS  +MI+GY+E G     ++ F  ML+  + P+   M SIL   ++   +   +
Sbjct: 311 PQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGL 370

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
            +H++ +K+G   D  +++ LI+ Y K   +     + SE+ +K  +  N++ S  +   
Sbjct: 371 GIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVG 430

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
             ++A+EL+  +       +  T + +L  C+ +  L+ G+ +H   L+   D + F+E+
Sbjct: 431 RTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLET 490

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A++DMY KCG +E A+R F+ I    LA WN M+ GY   G  H   + +++M + G+KP
Sbjct: 491 ALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKP 550

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D IT+L VL++C H GLV E + Y   M +  G+IP L+H AC+VDLL R G LE A + 
Sbjct: 551 DRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIF 610

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           +  M + PD+ IW +LL++C I+  + LG     +LL L   +   YVL+SNLYAS G W
Sbjct: 611 VKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRW 670

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHV 723
           +DV ++RK MK+       G S I V
Sbjct: 671 DDVARVRKMMKDTGGDGSSGISLIEV 696



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 265/603 (43%), Gaps = 58/603 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI + L K+G +    L+T  +  + K      A     +   RD++++NALI G +R  
Sbjct: 74  QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL++F ++  +G  P   T   LV +CG    + + + +HG  +K G      + +
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 193

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                YAK  ++ +AE+ F +  +   V++  M+  Y  NG FD++  VF +M+   +E+
Sbjct: 194 ALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEV 253

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           N  ++ ++L A+  +   +  H + +K GF +     +  +++  Y  CG    A  +++
Sbjct: 254 NYVTIISLLSANAHL---DSTHCYVIKTGFATDA--SVITSLVCSYAGCGNIESAGLLYN 308

Query: 238 EITEPDVVSWSERIAAACDG------VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            + + ++VS +  I+   +       VE F     L+      +   M+++L        
Sbjct: 309 LMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKP---DAVAMVSILHGFTDPTF 365

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           + +G  I A+  K G      + N LISMY K G +    S+F  +  K  +SWNS+I+ 
Sbjct: 366 IGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISA 425

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             + G  + A+++FC M  +   P+  T+AS+L   S    L+   ++H++++++   ++
Sbjct: 426 CIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDME 485

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           D + + L+  Y KC  L  ++RV   I +      N + S    +     AL  Y  +  
Sbjct: 486 DFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQE 545

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + +  TF  VL AC                                      G + +
Sbjct: 546 QGLKPDRITFLGVLSACT-----------------------------------HGGLVWE 570

Query: 532 AKRAFRKICRD--SLAGW--NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            KR FR +  D   + G   NA M+       + E + +F K     V+PD   + A+LT
Sbjct: 571 GKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVK--NMEVEPDSAIWGALLT 628

Query: 588 SCC 590
           SCC
Sbjct: 629 SCC 631



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 212/509 (41%), Gaps = 51/509 (10%)

Query: 275 NEYTMINLLSSVGGERILRA-----GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           NE +++  +    G R L A       QIQ    K GF + V +  A +  YGK G +  
Sbjct: 47  NEVSVVLWVKFAVGTRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYY 106

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A+ +F+ +  +D VSWN++I GYS NG+   AL++F  ML     P   T+  ++ +   
Sbjct: 107 AQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGR 166

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
              + Q   +H   IKSG  LD  + + L + Y KC  L  ++ +  EI +K  V  N +
Sbjct: 167 PDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTM 226

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
                      EA+ +++ +     EVN  T   +L A A +       + HC  +K  +
Sbjct: 227 IGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHL------DSTHCYVIKTGF 280

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             D  V ++++  Y  CG IE A   +  + + +L    AM+ GYA+ G    V   F +
Sbjct: 281 ATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQ 340

Query: 570 MSKFGVKPDEITYLAVL---------------------TSCCHAGLV-----------RE 597
           M +  +KPD +  +++L                     T  C   LV            +
Sbjct: 341 MLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGD 400

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI---PPDAHIWQSLL 654
             T  S  S++     QL  +  ++    +VG    A     QM +    PDA    SLL
Sbjct: 401 IETVFSLFSEMGE--KQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLL 458

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           + C+  G +  G    + +L    D E      L ++Y   G      ++ K +KE   C
Sbjct: 459 AGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEP--C 516

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
                + I   G + H +   S +S+ +E
Sbjct: 517 LATWNTMISGYGLSGHEHRALSCYSEMQE 545


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 231/742 (31%), Positives = 364/742 (49%), Gaps = 28/742 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L + +G    P +   L+S ++       A          D   +N+LI      C
Sbjct: 30  RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIR--THHC 87

Query: 61  QSG--PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGF----SS 111
            S    AL    R+     RP  FT      A   L    +   VH  C++ G       
Sbjct: 88  ASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGG 147

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            V + S  +  YA+ G +  A   F +  + D VA+TA+V G V NGE        VEM 
Sbjct: 148 SVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMV 207

Query: 172 SLG----LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            L        N  ++ + L   G   ++  G  +HG+ VKVG   G    + +A+ ++Y 
Sbjct: 208 RLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGV--GDSPMVISALFSMYS 265

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMIN 281
           +C    DA  +F E+ E DVVSW+  I   C  G+  EA  LF+++  +  Q ++  +  
Sbjct: 266 KCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSC 325

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LLS +G    +  GK   A   K  F + V +GNALISMYGK   V++A  +F  L  +D
Sbjct: 326 LLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRD 385

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHML---EFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           + SWN MI GY + G   + L+++  M     +  + +  ++ S + + S    L+    
Sbjct: 386 ADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRS 445

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYAS 457
            H + IK     D S+ + LI  YG+C   + + ++      K + V  N L S   +  
Sbjct: 446 AHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLG 505

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
               A+ LY  +       N +T   V+ ACA +  LE+G+ IH    +  +D D+ + +
Sbjct: 506 HSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINT 565

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+IDMY KCG +  A+R F  + +  +  WN M+ GY  HG   +   LF KM    +KP
Sbjct: 566 ALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKP 625

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           + +T+LA+L++CCH+GL+ E R   + M   + L P L+HYAC+VDLLG+ G L+ A+  
Sbjct: 626 NGVTFLAILSACCHSGLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDM 684

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           +  MP+ PD  IW +LLSAC ++ + ++GL    K      +NE  Y+L+SN Y SA  W
Sbjct: 685 VLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKW 744

Query: 698 NDVGKLRKEMKEKFLCKEPGYS 719
           +++ KLR+ MK   + K  G+S
Sbjct: 745 DEIEKLREAMKNHGVQKGAGWS 766


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 210/733 (28%), Positives = 369/733 (50%), Gaps = 22/733 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++  +K+G   D  ++   IS +  F     +      +   ++++ N++IS   +   
Sbjct: 265 LHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGA 324

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              A  +F  +R +GL P+  T  S++  C +   +   E VHG+ +K G + +V +VS 
Sbjct: 325 WEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSA 384

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y+K G++ SA   F    +   + + +++ GY+ N +++        M+  G++ +
Sbjct: 385 LVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPD 444

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN----LYVRCGQKLD 231
             ++ +V+     + D+  G+ IH + V+          LN ++MN    +Y  CGQ   
Sbjct: 445 ALTVISVISKCRHTEDLHVGKSIHAYAVRSRL------ELNESVMNALLAMYADCGQLSI 498

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+F  +    ++SW+  I   A   D V     F  +R  D Q +  T+I L+SS+  
Sbjct: 499 CCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSA 558

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  G+ + +   + G    VS+ NALI+MY  CG +     +FD L   +++S+N++
Sbjct: 559 IEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNAL 618

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + GY +N  F + L +F HM++    PN  T+ ++L       S  Q   VHS+ I++  
Sbjct: 619 MTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPIC---HSQLQGKTVHSYAIRNFS 675

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
            L+ S+ +  I  Y + N L     +   + ++N +  NA+ S  V       A + +R 
Sbjct: 676 KLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQ 735

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I     + +  T   ++ AC+ +   +  + +  +AL+  +D  I V +A+IDM+ +CG+
Sbjct: 736 IQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGS 795

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I  A++ F          W+ M+  Y+ HG      +LF  M   G+KPD+IT+++VL++
Sbjct: 796 ISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSA 855

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C  +G + + RT    M   HG+ P++EHYAC+VDLLGR G L+ A   +  MP  P   
Sbjct: 856 CSRSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKS 915

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           + +SLL AC  +GN  LG   G  L E    N  +YV+LSN+YASAG W+D  +LR +M+
Sbjct: 916 LLESLLGACRFHGNSKLGESVGKILTESDHGNPRSYVMLSNIYASAGKWSDYERLRSDME 975

Query: 709 EKFLCKEPGYSWI 721
            K L K+ G S I
Sbjct: 976 AKGLIKDVGVSLI 988



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 171/710 (24%), Positives = 331/710 (46%), Gaps = 40/710 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           +++  +++ GH  +  + T L+  + K      + R     ++RD+I++NA+ISG +   
Sbjct: 163 EVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNG 222

Query: 59  -FCQSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVY 114
              ++  ALK   +++  G RP+A +     S+V   G     + +H   LK G      
Sbjct: 223 CLLEAAEALK---QMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDES 279

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +   FI  YA  G + S+   F   L  + V+  +M+   + +G ++K+  VF  MR  G
Sbjct: 280 VTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKG 339

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           L  N  ++ ++L      F +  GE +HG  +K G    V   + +A++++Y + G    
Sbjct: 340 LVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQV--SVVSALVSMYSKLGDLDS 397

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           AV +F  +TE   + W+  I+      +     G  + ++      +  T+I+++S    
Sbjct: 398 AVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRH 457

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK I A+  +       S+ NAL++MY  CGQ++    +F  +  +  +SWN++
Sbjct: 458 TEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTI 517

Query: 349 IAGYSENGFFNQALDMFCHM----LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           I+G++ENG     L  FC M    ++F L+    T+ +++ ++S  + +     VHS  I
Sbjct: 518 ISGFAENGDSVACLRFFCQMRLADMQFDLV----TLIALISSLSAIEDITVGESVHSLAI 573

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           +SG  LD S+ + LIT Y  C  +   +++   +   N +  NAL +     +   E L 
Sbjct: 574 RSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILP 633

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +  + ++ N  T   +L  C +     QGK +H  A++     +  + ++ I MY 
Sbjct: 634 LFYHMIKNDQKPNIITLLNLLPICHSQL---QGKTVHSYAIRNFSKLETSLFTSAICMYS 690

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           +   +E     F  +   +   WNA++    Q        + F ++    VK D +T LA
Sbjct: 691 RFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLA 750

Query: 585 VLTSCCHAGL--VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           ++++C   G   + E  T ++      G I  L     ++D+  R G +  A+   D + 
Sbjct: 751 LISACSQLGKADLAECVTAIALQKGFDGTIVVLN---ALIDMHSRCGSISFARKIFD-IS 806

Query: 643 IPPDAHIWQSLLSACTIYGN----IDLGLLAGSKLLELQPDNESTYVLLS 688
           +  D+  W ++++A +++G+    +DL L+  S    ++PD+ +   +LS
Sbjct: 807 MEKDSVSWSTMINAYSMHGDGGSALDLFLMMVST--GIKPDDITFVSVLS 854



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 256/524 (48%), Gaps = 12/524 (2%)

Query: 80  DAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D FTF  +++AC +   L+  + VH   ++ G    V + +  ++ YAKSG++  +   F
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE 194
                 D +++ AM+ GY  NG   ++ E   +M+  G   N  SL  ++   +   V++
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+ +H F +K G L      +  A +++Y   G    ++ +F +    ++VS +  I+ 
Sbjct: 261 AGDPLHAFALKSGVLGD--ESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISV 318

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   +AFG+F+ +R      N  T++++L        +  G+ +     K G  E 
Sbjct: 319 CMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQ 378

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           VS+ +AL+SMY K G ++ A  +F  +  K  + WNS+I+GY  N  +N  +     M  
Sbjct: 379 VSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQI 438

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + P+  T+ S++    +++ L     +H++ ++S   L++S+++ L+  Y  C  L+ 
Sbjct: 439 EGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSI 498

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
             ++   ++ +  +  N + S           L  +  +  +  + +  T   ++ + +A
Sbjct: 499 CCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSA 558

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + D+  G+++H LA+++  + D+ V +A+I MY  CG I+  ++ F  +   +   +NA+
Sbjct: 559 IEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNAL 618

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
           M GY ++  + E+  LF  M K   KP+ IT L +L   CH+ L
Sbjct: 619 MTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLP-ICHSQL 661



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 160/333 (48%), Gaps = 2/333 (0%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           E  GL++++    F  + +T   ++ +      LR GK++     + G    V +  AL+
Sbjct: 127 ELLGLYREV--CAFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALL 184

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY K GQV+ +R +FD +  +D +SWN+MI+GYS NG   +A +    M +    PN  
Sbjct: 185 DMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNAS 244

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           ++  I+  VS          +H+  +KSG L D+S+    I+ Y     L+ S  +  + 
Sbjct: 245 SLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQS 304

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
              N V  N++ SV +      +A  ++R +       N  T   +L  C+    +  G+
Sbjct: 305 LVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGE 364

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           ++H + +K    + + V SA++ MY K G ++ A   F  +   S   WN+++ GY  + 
Sbjct: 365 SVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNN 424

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            ++ V     +M   GV PD +T ++V++ C H
Sbjct: 425 KWNMVMGSVRRMQIEGVDPDALTVISVISKCRH 457



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 7/142 (4%)

Query: 459 HAEALELYRTI--WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
           H E L LYR +  +GS    +  TF  V++ACAA++ L  GK +HC  ++  +  ++ V+
Sbjct: 125 HRELLGLYREVCAFGS----DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQ 180

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++DMY K G ++ ++R F  +    L  WNAM+ GY+ +GC  E +    +M + G +
Sbjct: 181 TALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFR 240

Query: 577 PDEITYLAVLTSCCHAGLVREA 598
           P+  + + +++     G VR+A
Sbjct: 241 PNASSLVGIVSMVSGLG-VRDA 261


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 223/750 (29%), Positives = 387/750 (51%), Gaps = 37/750 (4%)

Query: 25  FTKFADFRRAFRFLFD--TQNRDIITYNALISGLARFCQSGPALKLFD---RLRYQGLRP 79
           F +F    R    LFD  +Q     + N  IS   R      AL +F    +L Y G   
Sbjct: 17  FQRFYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHM 76

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D  T    +KAC G L+    +HG     GF+S V + +  +  Y K+G   +A   F +
Sbjct: 77  DEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 136

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---- 194
            +D D V++  ++ G+  N     +    V M+S G+  + F+ +  L  SF V      
Sbjct: 137 LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTAL--SFCVGSEGFL 191

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G Q+    VK G  S +   + N+ + +Y R G    A ++FDE++  D++SW+  ++ 
Sbjct: 192 LGLQLQSTVVKTGLESDLV--VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249

Query: 254 ACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                  G EA  +F+D+     +++  +  +++++   E  L+  +QI   C K G+  
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
           ++ +GN L+S Y KCG +   +S+F  +  ++ VSW +MI+   ++     A+ +F +M 
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMR 364

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              + PN  T   ++ AV  ++ +K+ +++H   IK+GF+ + S+ +  IT Y K  AL 
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 424

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           ++K+   +I  +  +  NA+ S         EAL+++ +        N  TF  VL A A
Sbjct: 425 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIA 483

Query: 490 AMTDL--EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
              D+  +QG+  H   LK   +    V SA++DMY K G I+++++ F ++ + +   W
Sbjct: 484 FAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVW 543

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            +++  Y+ HG +  V NLF+KM K  V PD +T+L+VLT+C   G+V +     + M +
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           ++ L P  EHY+C+VD+LGR G L+ A+  + ++P  P   + QS+L +C ++GN+ +G 
Sbjct: 604 VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGA 663

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
                 +E++P+   +YV + N+YA    W+   ++RK M++K + KE G+SWI VG   
Sbjct: 664 KVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTE 723

Query: 728 -----HHFYAGDSSHSQSKEIYK--ELIKL 750
                  F +GD SH +S EIY+  E+I L
Sbjct: 724 GSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 753



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 291/558 (52%), Gaps = 36/558 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+     +G      +S  ++  + K   F  A     +  + D++++N ++SG   F 
Sbjct: 97  QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---FD 153

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GS------LQENEIVHGVCLKLGFSSRV 113
            +  AL    R++  G+  DAFT+S+ +  C GS      LQ    +    +K G  S +
Sbjct: 154 DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ----LQSTVVKTGLESDL 209

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRS 172
            + + FI  Y++SG    A   F +    D +++ +++ G    G F  ++  +F +M  
Sbjct: 210 VVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR 269

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+EL+  S T+V+       D+K   QIHG  +K G+ S +   + N +M+ Y +CG  
Sbjct: 270 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL--EVGNILMSRYSKCGV- 326

Query: 230 LDAVK-MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           L+AVK +F +++E +VVSW+  I++  D  +A  +F ++RF+    NE T + L+++V  
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISSNKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKC 384

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              ++ G +I   C K GF+   S+GN+ I++Y K   + DA+  F+ + F++ +SWN+M
Sbjct: 385 NEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAM 444

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKS 406
           I+G+++NGF ++AL MF      ++ PN YT  S+L A++ ++  S+KQ  + H+H++K 
Sbjct: 445 ISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---AL 463
           G      + S L+  Y K   ++ES++V +E+ +KN        S++   S H +    +
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF---VWTSIISAYSSHGDFETVM 560

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVID 521
            L+  +       +  TF  VL AC     +++G  I  + ++  Y+ +   E  S ++D
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV-YNLEPSHEHYSCMVD 619

Query: 522 MYCKCGTIEDAKRAFRKI 539
           M  + G +++A+    ++
Sbjct: 620 MLGRAGRLKEAEELMSEV 637


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 197/570 (34%), Positives = 306/570 (53%), Gaps = 11/570 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G Q+H   +K+GF  G    LNN ++++Y +CG+   A ++FD + E +VVSW+  +
Sbjct: 20  LRGGVQLHAALMKLGF--GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALM 77

Query: 252 AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                  +  E   LF ++R +    NE+T+   L + GG    RAG QI   C + GF 
Sbjct: 78  VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGG--TRAGVQIHGVCVRTGFE 135

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + N+L+ MY K     DAR +FD +  ++  +WNSMI+GY+  G    +L +F  M
Sbjct: 136 GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREM 195

Query: 369 -LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKC 425
                  P+ +T AS+L+A S   + ++  QVH+ +   G     + I    L+  Y KC
Sbjct: 196 QRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC 255

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
           + L  + +V   ++++NA+    +           EA+ L+R  W S    +G   S V+
Sbjct: 256 HRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVV 315

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
              A    +EQGK +HC   K     D+ V ++++DMY KCG   +A R FR++   ++ 
Sbjct: 316 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 375

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W AM+ G  +HG   E  +LF +M + GV+ DE+ YLA+L++C H+GLV E R Y S +
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 435

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
                + P+ EHYAC+VDLLGR G L  AK  I  MP+ P   +WQ+LLSAC ++ ++ +
Sbjct: 436 CQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAV 495

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G   G  LL +  DN   YV+LSN+ A AG W +   +R  M+ K L K+ G SW  V  
Sbjct: 496 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 555

Query: 726 YTHHFY-AGDSSHSQSKEIYKELIKLYEHM 754
             H FY  GD +H Q+ +I + L ++   M
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARM 585



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 224/454 (49%), Gaps = 20/454 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL+    +H   +KLGF S   L +  I+ YAK G++  A   F    + + V++TA++ 
Sbjct: 19  SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 78

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGV 211
           G++ +GE  +   +F EMR  G   NEF+L+A L A     + G QIHG  V+ GF    
Sbjct: 79  GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGH- 137

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL- 267
            + + N+++ +Y +     DA ++FD I   ++ +W+  I   A A  G ++  +F+++ 
Sbjct: 138 -DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 196

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS--IGNALISMYGKCG 325
           R +D Q +E+T  +LL +  G    R G Q+ A     G     +  +  AL+ +Y KC 
Sbjct: 197 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCH 256

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
           ++  A  +FD L  ++++ W ++I G+++ G   +A+ +F       +  +G+ ++S++ 
Sbjct: 257 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVA 316

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
             ++   ++Q  QVH +  K+   LD S+ + L+  Y KC    E+ R   E+  +N V 
Sbjct: 317 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 376

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
             A+ + +       EA++L+  +     E +   +  +L AC+       G    C   
Sbjct: 377 WTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACS-----HSGLVDECRRY 431

Query: 506 KARYDQDIFVE------SAVIDMYCKCGTIEDAK 533
            +R  QD  +       + ++D+  + G + +AK
Sbjct: 432 FSRICQDRRMRPKAEHYACMVDLLGRAGELREAK 465



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 218/456 (47%), Gaps = 11/456 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+K G   D +L+  LI  + K      A         R+++++ AL+ G     
Sbjct: 25  QLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHG 84

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-VHGVCLKLGFSSRVYLVSGF 119
           ++   L+LF  +R  G  P+ FT S+ +KACG      + +HGVC++ GF     + +  
Sbjct: 85  EARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSL 144

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEM-RSLGLEL 177
           +  Y+K      A   F D +   N+A + +M+ GY   G+   S  VF EM R    + 
Sbjct: 145 VVMYSKGRWTGDARRVF-DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+  ++L A   +   +EG Q+H      G        L  A++++YV+C +   A++
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   + + W+  I   A +G   EA  LF+    +  + + + + ++++      +
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 323

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ+  +  K      VS+ N+L+ MY KCG   +A   F  +  ++ VSW +MI G
Sbjct: 324 VEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMING 383

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++G   +A+D+F  M E  +  +     ++L A S+S  + +  +  S I +   +  
Sbjct: 384 VGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRP 443

Query: 412 DS-MISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +   +C++   G+   L E+K ++  +  +  V +
Sbjct: 444 KAEHYACMVDLLGRAGELREAKELILSMPMEPTVGV 479



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 4/235 (1%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +A +L A +   SL+  +Q+H+ ++K GF  D  + + LI  Y KC  L+ +  V   + 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           ++N V   AL    ++     E L L+  + GS    N  T S  LKAC   T    G  
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQ 124

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH + ++  ++    V ++++ MY K     DA+R F  I   +LA WN+M+ GYA  G 
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 560 YHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
             +   +F +M  +   +PDE T+ ++L +C   G  RE     + M+ + G+ P
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA-VRGVSP 238


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 219/695 (31%), Positives = 361/695 (51%), Gaps = 20/695 (2%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D      L++AC    SL++ +++H   + LG  + ++L    I  Y        A+  F
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61

Query: 137 RDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGASFDVKE 194
            +  +   ++ +  ++ GY  N  + ++ E+F ++     L+ + ++  +V  A   +  
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121

Query: 195 ---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
              G+ IH   +K G +  +   + ++++ +Y +C     A+ +F+E+ E DV  W+  I
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIV--VGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 252 AAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
           +         D +E FGL +  RF  F+ N  T+   +SS      L  G +I       
Sbjct: 180 SCYYQSGNFKDALEYFGLMR--RFG-FEPNSVTITTAISSCARLLDLNRGMEIHEELINS 236

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           GF+    I +AL+ MYGKCG +  A  IF+ +  K  V+WNSMI+GY   G     + +F
Sbjct: 237 GFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLF 296

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M    + P   T++S++   S S  L +   VH + I++    D  + S L+  Y KC
Sbjct: 297 KRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC 356

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             +  ++++   I K   V  N + S  V      EAL L+  +  S  E +  TF+ VL
Sbjct: 357 GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVL 416

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            AC+ +  LE+GK IH L ++ + D +  V  A++DMY KCG +++A   F+ + +  L 
Sbjct: 417 TACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W +M+  Y  HG  +    LF +M +  VKPD + +LA+L++C HAGLV E   Y + M
Sbjct: 477 SWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQM 536

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNID 664
            +++G+IP++EHY+C++DLLGR G L  A   + Q P I  D  +  +L SAC ++ NID
Sbjct: 537 INVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNID 596

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           LG      L++  PD+ STY+LLSN+YASA  W++V  +R +MKE  L K PG SWI + 
Sbjct: 597 LGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEIN 656

Query: 725 GYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
                F+  D+SH   + ++K L  L +HM   +K
Sbjct: 657 QKILPFFVEDNSHLHLELVFKCLSYLSDHMEDESK 691



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 263/556 (47%), Gaps = 28/556 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR--DIITYNALISGLARF 59
           I+  ++  G   D  L  TLI+ +     +  A + +FD      +I  +N L++G  + 
Sbjct: 25  IHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHA-KCVFDNMENPCEISLWNGLMAGYTKN 83

Query: 60  CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
                AL+LF++L  Y  L+PD++T+ S+ KACG L      +++H   +K G    + +
Sbjct: 84  YMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVV 143

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  +  Y K      A   F +  + D   +  ++  Y  +G F  + E F  MR  G 
Sbjct: 144 GSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGF 203

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E N  ++T  + +     D+  G +IH   +  GFL  + + +++A++++Y +CG    A
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFL--LDSFISSALVDMYGKCGHLEMA 261

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +++F+++ +  VV+W+  I+      D +    LFK +     +    T+ +L+      
Sbjct: 262 IEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRS 321

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK +  +  +      V + ++L+ +Y KCG+V  A  IF  +     VSWN MI
Sbjct: 322 ARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMI 381

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY   G   +AL +F  M +  +  +  T  S+L A S   +L++  ++H+ II+    
Sbjct: 382 SGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLD 441

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS-CHAE-ALELYR 467
            ++ ++  L+  Y KC A++E+  V   + K++ V   ++  +  Y S  HA  ALEL+ 
Sbjct: 442 NNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSM--ITAYGSHGHAYGALELFA 499

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALKARYDQDIFVESAVIDM 522
            +  S  + +   F  +L AC     +++G     + I+   +  R +      S +ID+
Sbjct: 500 EMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEH----YSCLIDL 555

Query: 523 YCKCGTIEDAKRAFRK 538
             + G + +A    ++
Sbjct: 556 LGRAGRLHEAYEILQQ 571



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/92 (21%), Positives = 45/92 (48%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L+I+     + ++   L+  + K      AF        RD++++ ++I+      
Sbjct: 430 EIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHG 489

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
            +  AL+LF  +    ++PD   F +++ ACG
Sbjct: 490 HAYGALELFAEMLQSNVKPDRVAFLAILSACG 521


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 214/679 (31%), Positives = 350/679 (51%), Gaps = 19/679 (2%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           +L + C +LQ  + +H   +       V + +  +  Y   G +  A   F    + D  
Sbjct: 59  TLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVY 118

Query: 146 AYTAMVCGYVWNGEFDKSKEVF----VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGF 201
           A+  M+ GY   G    S EV     + M S GL+ +  +  +VL A  +V +G +IH  
Sbjct: 119 AWNLMISGY---GRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCL 175

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
            +K GF+  V  ++  ++++LY R G  ++A  +FDE+   D+ SW+  I+  C   +  
Sbjct: 176 ALKFGFMWDV--YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAK 233

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  L   LR     ++  T+++LLS+         G  I ++  K G    + + N LI
Sbjct: 234 EALTLSDGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            +Y + G + D + +FD +  +D +SWNS+I  Y  N    +A+ +F  M    + P+  
Sbjct: 290 DLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCL 349

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSE 437
           T+ S+   +S    ++    V    ++ G+ L+D  I + ++  Y K   ++ ++ V + 
Sbjct: 350 TLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMTDLE 495
           +  K+ +  N + S        +EA+E+Y  +     E+  N  T+  VL AC+    L 
Sbjct: 410 LPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALR 469

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           QG  +H   LK     D+FV +++ DMY KCG ++DA   F +I R +   WN ++  + 
Sbjct: 470 QGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHG 529

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG   +   LF +M   GVKPD IT++ +L++C H+GLV E       M   +G+ P L
Sbjct: 530 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSL 589

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           +HY C+VDL GR G LE A   I  MP+ PDA IW +LLSAC ++GN+DLG +A   L E
Sbjct: 590 KHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 649

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           ++P++   +VLLSN+YASAG W  V ++R     K L K PG+S + V      FY G+ 
Sbjct: 650 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQ 709

Query: 736 SHSQSKEIYKELIKLYEHM 754
           +H   +E+Y+EL  L+E +
Sbjct: 710 THPMYEEMYRELTALHEKL 728



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 296/569 (52%), Gaps = 27/569 (4%)

Query: 36  RFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGS 93
           R+ FD   NRD+  +N +ISG  R   S   ++ F   +   GL+PD  TF S++KAC +
Sbjct: 106 RYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN 165

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           + +   +H + LK GF   VY+ +  I  Y + G +V+A + F +    D  ++ AM+ G
Sbjct: 166 VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISG 225

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
           Y  +G   ++  +   +R++   +   SL +    + D   G  IH + +K G  S +  
Sbjct: 226 YCQSGNAKEALTLSDGLRAMD-SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-- 282

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFN 270
            ++N +++LY   G   D  K+FD +   D++SW+  I A       + A  LF+++R +
Sbjct: 283 FVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLS 342

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVND 329
             Q +  T+I+L S +     +RA + +Q F  + G F+E ++IGNA++ MY K G V+ 
Sbjct: 343 RIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE--FSLIPNGYTMASILEAV 387
           AR++F++L  KD +SWN++I+GY++NGF ++A++M+  M E    +  N  T  S+L A 
Sbjct: 403 ARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPAC 462

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S + +L+Q M++H  ++K+G  LD  + + L   YGKC  L+++  +  +I + N+V  N
Sbjct: 463 SQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWN 522

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            L +   +     +A+ L++ +     + +  TF  +L AC+    +++G+   C  +  
Sbjct: 523 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGE--WCFEM-M 579

Query: 508 RYDQDIFVE----SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHE 562
           + D  I         ++D+Y + G +E A    + +     A  W A++     HG    
Sbjct: 580 QTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVD- 638

Query: 563 VSNLFNKMSK---FGVKPDEITYLAVLTS 588
                 K++    F V+P+ + Y  +L++
Sbjct: 639 ----LGKIASEHLFEVEPEHVGYHVLLSN 663



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 222/447 (49%), Gaps = 31/447 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+ L +K G   D  ++ +LI  + ++     A R LFD    RD+ ++NA+ISG   +
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNA-RILFDEMPTRDMGSWNAMISG---Y 226

Query: 60  CQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
           CQSG    AL L D LR      D+ T  SL+ AC   G       +H   +K G  S +
Sbjct: 227 CQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  I+ YA+ G +   +  F      D +++ +++  Y  N +  ++  +F EMR  
Sbjct: 283 FVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLS 342

Query: 174 GLE---LNEFSLTAVLGASFDVKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQK 229
            ++   L   SL ++L    +++    + GF ++ G FL  +   + NA++ +Y + G  
Sbjct: 343 RIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDIT--IGNAVVVMYAKLGLV 400

Query: 230 LDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
             A  +F+ +   DV+SW+  I+       A + +E + + ++    +   N+ T +++L
Sbjct: 401 DSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEE-EGGEISANQGTWVSVL 459

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            +      LR G ++     K G    V +G +L  MYGKCG+++DA S+F  +   +SV
Sbjct: 460 PACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSV 519

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
            WN++IA +  +G   +A+ +F  ML+  + P+  T  ++L A S+S  + +       +
Sbjct: 520 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFE-M 578

Query: 404 IKSGFLLDDSM--ISCLITTYGKCNAL 428
           +++ + +  S+    C++  YG+   L
Sbjct: 579 MQTDYGITPSLKHYGCMVDLYGRAGQL 605



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 190/420 (45%), Gaps = 36/420 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S  IK+G   +  +S  LI  + +F   +   +       RD+I++N++I       Q
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328

Query: 62  SGPALKLFDRLRYQGLRPDAFT---FSSLVKACGSLQENEIVHGVCLKLG-FSSRVYLVS 117
              A+ LF  +R   ++PD  T    +S++   G ++    V G  L+ G F   + + +
Sbjct: 329 PLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGN 388

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G + SA   F    + D +++  ++ GY  NG   ++ E++  M   G E+
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEI 448

Query: 178 --NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N+ +  +VL A   +  +++G ++HG  +K G    V   +  ++ ++Y +CG+  DA
Sbjct: 449 SANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV--FVGTSLADMYGKCGRLDDA 506

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVEAFG-----LFKDLRFNDFQINEYTMINLLSSVG 287
           + +F +I   + V W+  I  AC G    G     LFK++     + +  T + LLS+  
Sbjct: 507 LSLFYQIPRVNSVPWNTLI--ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 564

Query: 288 GERILRAGKQIQAFCYKV-----GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-D 341
              ++  G+    +C+++     G    +     ++ +YG+ GQ+  A +    +  + D
Sbjct: 565 HSGLVDEGE----WCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD 620

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFS--------LIPNGYTMASILEAVSNSKSL 393
           +  W ++++    +G  +       H+ E          L+ N Y  A   E V   +S+
Sbjct: 621 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 680


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 198/670 (29%), Positives = 351/670 (52%), Gaps = 8/670 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C SL+E   +  +  K G        +  +  + + G +  A   F       NV 
Sbjct: 43  LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVL 102

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           Y  M+ G+    + DK+ + FV MR   +E   ++ T +L   G   +++ G++IHG  V
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--A 260
           K GF   +       + N+Y +C Q  +A K+FD + E D+VSW+  +A  + +G+   A
Sbjct: 163 KSGFSLDL--FAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             +   +   + + +  T++++L +V   R++R GK+I  +  + GF  +V+I  AL+ M
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG +  AR +FD ++ ++ VSWNSMI  Y +N    +A+ +F  ML+  + P   ++
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
              L A ++   L++   +H   ++     + S+++ LI+ Y KC  ++ +  +  ++  
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +  V  NA+           EAL  +  +     + +  T+  V+ A A ++     K I
Sbjct: 401 RTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H + ++   D+++FV +A++DMY KCG I  A+  F  +    +  WNAM+ GY  HG  
Sbjct: 461 HGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIG 520

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
                LF +M K  ++P+ +T+L+V+++C H+GLV         M + + + P ++HY  
Sbjct: 521 KAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGA 580

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           +VDLLGR G L  A   I QMP+ P  +++ ++L AC I+ N++       +L EL P++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPED 640

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
              +VLL+N+Y +A MW  VG++R  M  + L K PG S + +    H F++G ++H  S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSS 700

Query: 741 KEIYKELIKL 750
           K+IY  L KL
Sbjct: 701 KKIYAFLEKL 710



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 285/605 (47%), Gaps = 17/605 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I  L+ KNG + + +  T L+S F ++     A R       +  + Y  ++ G A+  
Sbjct: 55  HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVS 114

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ALK F R+R   + P  + F+ L+K CG   E  +   +HG+ +K GFS  ++ ++
Sbjct: 115 DLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G    YAK  ++  A   F    + D V++  +V GY  NG    + E+   M    L+ 
Sbjct: 175 GLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKP 234

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ +VL A      ++ G++IHG+ ++ GF S V  ++  A++++Y +CG    A  
Sbjct: 235 SFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLV--NIATALVDMYAKCGSLKTARL 292

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E +VVSW+  I A     +  EA  +F+ +     +  + +++  L +      
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGD 352

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I     ++     VS+ N+LISMY KC +V+ A S+F  L  +  VSWN+MI G
Sbjct: 353 LERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILG 412

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +++NG   +AL+ F  M   ++ P+ +T  S++ A++       A  +H  ++++    +
Sbjct: 413 FAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKN 472

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC A+  ++ +   + +++    NA+            ALEL+  +  
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK 532

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                NG TF  V+ AC+    +E G K  H +      +  +    A++D+  + G + 
Sbjct: 533 GTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLN 592

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLAVLTS 588
           +A     ++           M+G  Q    H+  N   K+++  F + P++  Y  +L +
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQ---IHKNVNFAEKVAERLFELNPEDGGYHVLLAN 649

Query: 589 CCHAG 593
              A 
Sbjct: 650 IYRAA 654


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 216/697 (30%), Positives = 351/697 (50%), Gaps = 18/697 (2%)

Query: 74  YQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           Y GL  D+ T++ LV+     GSL   ++ H   +K  F   ++L++  +  Y K GE  
Sbjct: 12  YLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT---AVLG 187
            A+  F      + V++ +++ GY   G + +   +F E R   L L++F+ +   +V G
Sbjct: 72  VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            + D++ G  IH   + V  L G    L N+++++Y +CG+   A  +F+   E D VSW
Sbjct: 132 RTLDLRLGRLIHAL-ITVSGLGGPV-LLTNSLIDMYCKCGRIDWARLVFESADELDSVSW 189

Query: 248 SERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE--RILRAGKQIQAFC 302
           +  IA         E   L   +  +   +N Y + + L + G      +  GK +    
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE-----NGF 357
            K+G    V +G AL+  Y K G + DA  IF  +   + V +N+MIAG+ +     + F
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 309

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            N+A+ +F  M    + P+ +T +SIL+A S  ++ +   Q+H+ I K     D+ + + 
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L+  Y    ++ +  +      K + V   +L    V        L L+  +  S R+ +
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T SI+L ACA +  ++ G+ IH  A+K        ++++ I MY KCG I+ A   F+
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 489

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +     +  W+ M+   AQHGC  E  +LF  M   G+ P+ IT+L VL +C H GLV E
Sbjct: 490 ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEE 549

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y   M   HG+ P ++H ACIVDLLGR G L  A+  I       D  +W+SLLSAC
Sbjct: 550 GLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 609

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++   D G     +++EL+P+  ++YVLL N+Y  AG+     ++R  MK++ + KEPG
Sbjct: 610 RVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPG 669

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SWI VG   H F AGD SH  S+ IY +L ++ E +
Sbjct: 670 LSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEI 706



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 244/514 (47%), Gaps = 20/514 (3%)

Query: 38  LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---S 93
           LFD    R+++++N+LISG  +       + LF   R   LR D FTFS+ +  CG    
Sbjct: 76  LFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLD 135

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L+   ++H +    G    V L +  I+ Y K G I  A + F    +LD+V++ +++ G
Sbjct: 136 LRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 195

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFL 208
           YV  G  D+   + V+M   GL LN ++L + L A     S  ++ G+ +HG  VK+G  
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 255

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD--------GVEA 260
             V   +  A+++ Y + G   DA K+F  + +P+VV ++  IA              EA
Sbjct: 256 LDVV--VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 313

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             LF +++    + +E+T  ++L +         GKQI A  +K        IGNAL+ +
Sbjct: 314 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 373

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y   G + D    F      D VSW S+I G+ +NG F   L +F  +L     P+ +T+
Sbjct: 374 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 433

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           + +L A +N  ++K   Q+H++ IK+G      + +  I  Y KC  ++ +     E   
Sbjct: 434 SIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKN 493

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KA 499
            + V  + + S      C  EA++L+  + GS    N  TF  VL AC+    +E+G + 
Sbjct: 494 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 553

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              +        ++   + ++D+  + G + +A+
Sbjct: 554 FEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAE 587



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 18/361 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ----- 61
           +K G  LD ++ T L+  + K  D   A +      + +++ YNA+I+G  +        
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 309

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
           +  A+ LF  ++ +G++P  FTFSS++KAC +++  E    +H    K    S  ++ + 
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +E Y+ SG I     CF     LD V++T+++ G+V NG+F+    +F E+   G + +
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+++ +L A  +   VK GEQIH + +K G   G    + N+ + +Y +CG    A   
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGI--GNFTIIQNSQICMYAKCGDIDSANMT 487

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E   PD+VSWS  I++        EA  LF+ ++ +    N  T + +L +     ++
Sbjct: 488 FKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLV 547

Query: 293 RAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIA 350
             G +  +      G    V     ++ + G+ G++ +A S I D     D V W S+++
Sbjct: 548 EEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLS 607

Query: 351 G 351
            
Sbjct: 608 A 608



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K     D  +   L+  ++         +    T   D++++ +LI G  +  
Sbjct: 350 QIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNG 409

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
           Q    L LF  L + G +PD FT S ++ AC +L   +  E +H   +K G  +   + +
Sbjct: 410 QFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN 469

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAK G+I SA M F++  + D V+++ M+     +G   ++ ++F  M+  G+  
Sbjct: 470 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 529

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL A      V+EG +      K   ++    H +  I++L  R G+  +A  
Sbjct: 530 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKH-SACIVDLLGRAGRLAEAES 588

Query: 235 -MFDEITEPDVVSWSERIAA 253
            + D   E D V W   ++A
Sbjct: 589 FIMDSGFEGDPVMWRSLLSA 608


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/570 (34%), Positives = 305/570 (53%), Gaps = 11/570 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G Q+H   +K+GF  G    LNN ++++Y +CG+   A ++FD + E +VVSW+  +
Sbjct: 20  LRGGVQLHAALMKLGF--GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALM 77

Query: 252 AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                  +  E   LF ++R +    NE+T+   L + GG    RAG QI   C + GF 
Sbjct: 78  VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGG--TRAGVQIHGVCVRTGFE 135

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + N+L+ MY K     DAR +FD +  ++  +WNSMI+GY+  G    +L +F  M
Sbjct: 136 GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREM 195

Query: 369 -LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKC 425
                  P+ +T AS+L+A S   + ++  QVH+ +   G     + I    L+  Y KC
Sbjct: 196 QRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC 255

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
           + L  + +V   ++++NA+    +           EA+ L+R  W S    +G   S V+
Sbjct: 256 HRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVV 315

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
              A    +EQGK +HC   K     D+ V ++++DMY KCG   +A R FR++   ++ 
Sbjct: 316 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 375

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W AM+ G  +HG   E  +LF +M   GV+ DE+ YLA+L++C H+GLV E R Y S +
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 435

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
                + P+ EHYAC+VDLLGR G L  AK  I  MP+ P   +WQ+LLSAC ++ ++ +
Sbjct: 436 CQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAV 495

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G   G  LL +  DN   YV+LSN+ A AG W +   +R  M+ K L K+ G SW  V  
Sbjct: 496 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 555

Query: 726 YTHHFY-AGDSSHSQSKEIYKELIKLYEHM 754
             H FY  GD +H Q+ +I + L ++   M
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARM 585



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 224/454 (49%), Gaps = 20/454 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL+    +H   +KLGF S   L +  I+ YAK G++  A   F    + + V++TA++ 
Sbjct: 19  SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 78

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGV 211
           G++ +GE  +   +F EMR  G   NEF+L+A L A     + G QIHG  V+ GF    
Sbjct: 79  GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGH- 137

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL- 267
            + + N+++ +Y +     DA ++FD I   ++ +W+  I   A A  G ++  +F+++ 
Sbjct: 138 -DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 196

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS--IGNALISMYGKCG 325
           R +D Q +E+T  +LL +  G    R G Q+ A     G     +  +  AL+ +Y KC 
Sbjct: 197 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCH 256

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
           ++  A  +FD L  ++++ W ++I G+++ G   +A+ +F       +  +G+ ++S++ 
Sbjct: 257 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVA 316

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
             ++   ++Q  QVH +  K+   LD S+ + L+  Y KC    E+ R   E+  +N V 
Sbjct: 317 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 376

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
             A+ + +       EA++L+  +     E +   +  +L AC+       G    C   
Sbjct: 377 WTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS-----HSGLVDECRRY 431

Query: 506 KARYDQDIFVE------SAVIDMYCKCGTIEDAK 533
            +R  QD  +       + ++D+  + G + +AK
Sbjct: 432 FSRICQDRRMRPKAEHYACMVDLLGRAGELREAK 465



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 217/456 (47%), Gaps = 11/456 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+K G   D +L+  LI  + K      A         R+++++ AL+ G     
Sbjct: 25  QLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHG 84

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-VHGVCLKLGFSSRVYLVSGF 119
           ++   L+LF  +R  G  P+ FT S+ +KACG      + +HGVC++ GF     + +  
Sbjct: 85  EARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSL 144

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEM-RSLGLEL 177
           +  Y+K      A   F D +   N+A + +M+ GY   G+   S  VF EM R    + 
Sbjct: 145 VVMYSKGRWTGDARRVF-DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+  ++L A   +   +EG Q+H      G        L  A++++YV+C +   A++
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   + + W+  I   A +G   EA  LF+    +  + + + + ++++      +
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 323

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ+  +  K      VS+ N+L+ MY KCG   +A   F  +  ++ VSW +MI G
Sbjct: 324 VEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMING 383

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++G   +A+D+F  M    +  +     ++L A S+S  + +  +  S I +   +  
Sbjct: 384 VGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRP 443

Query: 412 DS-MISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +   +C++   G+   L E+K ++  +  +  V +
Sbjct: 444 KAEHYACMVDLLGRAGELREAKELILSMPMEPTVGV 479



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 4/235 (1%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +A +L A +   SL+  +Q+H+ ++K GF  D  + + LI  Y KC  L+ +  V   + 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           ++N V   AL    ++     E L L+  + GS    N  T S  LKAC   T    G  
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQ 124

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH + ++  ++    V ++++ MY K     DA+R F  I   +LA WN+M+ GYA  G 
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 560 YHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
             +   +F +M  +   +PDE T+ ++L +C   G  RE     + M+ + G+ P
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA-VRGVSP 238


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/663 (30%), Positives = 352/663 (53%), Gaps = 16/663 (2%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VHG  ++ G S+ +   +  +  YAK G++  A   F   +  D V++ +++ GY  NG 
Sbjct: 36  VHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95

Query: 160 FDKS---KEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCN 213
              S    ++F EMR+  +  N ++L  +  A   ++    G Q H   VK+     +  
Sbjct: 96  ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI-- 153

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDL 267
           +++ +++ +Y + G   D +K+F  + E +  +WS  ++         + ++ F LF   
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           +  +   ++Y    +LSS+     +  G+QI     K G +  V++ NAL++MY KC  +
Sbjct: 214 K-EEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
           N+A  +FD    ++S++W++M+ GYS+NG   +A+ +F  M    + P+ YT+  +L A 
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           S+   L++  Q+HS ++K GF       + L+  Y K   L ++++    + +++     
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           +L S  V  S + EAL LYR +  +    N  T + VLKAC+++  LE GK +H   +K 
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +  ++ + SA+  MY KCG++ED    FR+     +  WNAM+ G + +G   E   LF
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M   G++PD++T++ ++++C H G V     Y + MSD  GL P+++HYAC+VDLL R
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L+ AK  I+   I     +W+ LLSAC  +G  +LG+ AG KL+ L     STYV L
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQL 632

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           S +Y + G   DV ++ K M+   + KE G SWI +    H F  GD+ H   +E  K+L
Sbjct: 633 SGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET-KDL 691

Query: 748 IKL 750
           + L
Sbjct: 692 VCL 694



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 281/574 (48%), Gaps = 20/574 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR--- 58
           ++  +I+ G       +  L++ + K     +A         +D++++N+LI+G ++   
Sbjct: 36  VHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYL 115
              S   ++LF  +R Q + P+A+T + + KA  SLQ + +    H + +K+     +Y+
Sbjct: 96  ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYV 155

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV---FVEMRS 172
            +  +  Y K+G +      F    + +   ++ MV GY   G  +++ +V   F+  + 
Sbjct: 156 DTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKE 215

Query: 173 LGLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G + +++  TAV   L A+  V  G QIH   +K G L  V   L+NA++ +Y +C   
Sbjct: 216 EGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA--LSNALVTMYSKCESL 272

Query: 230 LDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A KMFD   + + ++WS  +       + +EA  LF  +     + +EYT++ +L++ 
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GKQ+ +F  K+GF   +    AL+ MY K G + DAR  FD L  +D   W 
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I+GY +N    +AL ++  M    +IPN  TMAS+L+A S+  +L+   QVH H IK 
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF L+  + S L T Y KC +L +   V      K+ V  NA+ S L +     EALEL+
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCK 525
             +     E +  TF  ++ AC+    +E+G    + ++ +   D  +   + ++D+  +
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572

Query: 526 CGTIEDAKRAFRKICRD-SLAGWNAMMMGYAQHG 558
            G +++AK        D  L  W  ++     HG
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 189/384 (49%), Gaps = 7/384 (1%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T++  L+    +R L AG+ +     + G    +   N L++ Y KCG++  A SIF+ +
Sbjct: 16  TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75

Query: 338 IFKDSVSWNSMIAGYSENGFFNQA---LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           I KD VSWNS+I GYS+NG  + +   + +F  M    ++PN YT+A I +A S+ +S  
Sbjct: 76  ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              Q H+ ++K     D  + + L+  Y K   + +  +V + + ++N    + + S   
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195

Query: 455 YASCHAEALELYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                 EA++++        E + S   F+ VL + AA   +  G+ IHC+ +K      
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + + +A++ MY KC ++ +A + F      +   W+AM+ GY+Q+G   E   LF++M  
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            G+KP E T + VL +C     + E +   S +  L G    L     +VD+  + G L 
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLA 374

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSA 656
            A+   D +    D  +W SL+S 
Sbjct: 375 DARKGFDCLQ-ERDVALWTSLISG 397



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 179/346 (51%), Gaps = 14/346 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ + IKNG      LS  L++ ++K      A +    + +R+ IT++A+++G ++  
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           +S  A+KLF R+   G++P  +T   ++ AC     L+E + +H   LKLGF   ++  +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             ++ YAK+G +  A   F DCL   +VA +T+++ GYV N + +++  ++  M++ G+ 
Sbjct: 362 ALVDMYAKAGCLADARKGF-DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N+ ++ +VL A   +     G+Q+HG  +K GF  G+   + +A+  +Y +CG   D  
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYSKCGSLEDGN 478

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F      DVVSW+  I+       G EA  LF+++     + ++ T +N++S+   + 
Sbjct: 479 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538

Query: 291 ILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
            +  G         ++G    V     ++ +  + GQ+ +A+   +
Sbjct: 539 FVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           M     +  L P+  T+   L   S  ++L     VH  II++G        + L+  Y 
Sbjct: 1   MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYA-----SCHAEALELYRTIWGSCREVNG 478
           KC  L ++  + + I  K+ V  N+L  +  Y+     S     ++L+R +       N 
Sbjct: 61  KCGKLAKAHSIFNAIICKDVVSWNSL--ITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T + + KA +++     G+  H L +K     DI+V+++++ MYCK G +ED  + F  
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHE---VSNLFNKMSKFGVKPDEI--TYLAVLTSCCHAG 593
           +   +   W+ M+ GYA  G   E   V NLF +  + G   D +    L+ L +  + G
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238

Query: 594 LVREARTYLSCMSDLHGLI 612
           L R+    + C++  +GL+
Sbjct: 239 LGRQ----IHCITIKNGLL 253


>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
          Length = 807

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 211/734 (28%), Positives = 365/734 (49%), Gaps = 62/734 (8%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           IS   +  D   A   L    +R+ +++N +I+ +AR    G AL+++  +  +GL P  
Sbjct: 83  ISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTN 142

Query: 82  FTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           FT +S++ ACG+   L +    HG+ +K+G     ++ +G +  Y K G +  A   F  
Sbjct: 143 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDG 202

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---------- 188
               + V++TAM+ G    G  D +  +F  M   G+ ++  ++++VLGA          
Sbjct: 203 MPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYN 262

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVS 246
            +  ++  + IH   V+ GF  G   H+ N++++LY + G K+D A+K+F+ ++   +VS
Sbjct: 263 VARAIQLAQSIHALVVRKGF--GSDQHVGNSLVDLYAK-GMKMDEAIKVFESLSSVSIVS 319

Query: 247 WSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           W+  I       C    A  + + ++ + F+ NE T  N+L+S                C
Sbjct: 320 WNILITGYGQLGCY-ERAMEVLEFMQESGFEPNEVTYSNMLAS----------------C 362

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K                      V  AR++FD +      +WN++++GY +     + +
Sbjct: 363 IKAR-------------------DVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETI 403

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLIT 420
           D+F  M   ++ P+  T+A IL + S   + +   QVHS  ++   LL + M   S LI 
Sbjct: 404 DLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVR--LLLHNDMFVASGLID 461

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y KC  +  +  + + + +++ V  N++ S L   S   EA +  + +  +      S+
Sbjct: 462 IYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESS 521

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ ++  CA ++ + QG+ +H   LK  YDQ+++V  ++IDMY K G ++DA+  F  + 
Sbjct: 522 YASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMI 581

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             +L  WN M+ GYAQ+G   +   LF  M     KPD +T++AVLT C H+GLV EA T
Sbjct: 582 VKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVT 641

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           + + M   +G+ P +EHY C++D L R       +  I +MP   D  +W+ LL+AC ++
Sbjct: 642 FFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVH 701

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
            N +LG  +   L  L P N S YVLLSN+YA+ G   D   +R  M  + + K  GYSW
Sbjct: 702 HNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSW 761

Query: 721 IHVGGYTHHFYAGD 734
           ++    +  F   D
Sbjct: 762 VNHKDGSRAFMVAD 775



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 227/501 (45%), Gaps = 51/501 (10%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VY  +  I    ++G++ +A        D + V++  ++     +G   ++ E++  M  
Sbjct: 76  VYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQ 135

Query: 173 LGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            GL    F+L +VL   GA   + +G + HG  VKVG L G    + N ++ +Y +CG  
Sbjct: 136 EGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVG-LDG-HQFVENGLLGMYTKCGSV 193

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSS- 285
            DAV++FD +  P+ VS++  +     G    +A  LF  +     +++   + ++L + 
Sbjct: 194 ADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGAC 253

Query: 286 ----VGGERILRA---GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
                G   + RA    + I A   + GF     +GN+L+ +Y K  ++++A  +F+ L 
Sbjct: 254 AQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLS 313

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
               VSWN +I GY + G + +A+++   M E    PN  T +++L              
Sbjct: 314 SVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLA------------- 360

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
                            SC+     K   +  ++ +  +I K +    N L S       
Sbjct: 361 -----------------SCI-----KARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEEL 398

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
           H E ++L+R +     + + +T +++L +C+ + + E GK +H  +++     D+FV S 
Sbjct: 399 HQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASG 458

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +ID+Y KCG +  A   F  +    +  WN+M+ G A H    E  +   +M + G+ P 
Sbjct: 459 LIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPT 518

Query: 579 EITYLAVLTSCCHAGLVREAR 599
           E +Y +++  C     + + R
Sbjct: 519 ESSYASMINLCARLSSIPQGR 539



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/501 (22%), Positives = 219/501 (43%), Gaps = 48/501 (9%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L +K G      +   L+  +TK      A R      + + +++ A++ GLA+    
Sbjct: 165 HGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAV 224

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG-----------SLQENEIVHGVCLKLGFSS 111
             AL+LF R+   G+R D    SS++ AC            ++Q  + +H + ++ GF S
Sbjct: 225 DDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGS 284

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++ +  ++ YAK  ++  A   F     +  V++  ++ GY   G ++++ EV   M+
Sbjct: 285 DQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQ 344

Query: 172 SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G E NE + + +L +    ++                                     
Sbjct: 345 ESGFEPNEVTYSNMLASCIKARDVPS---------------------------------- 370

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  MFD+I +P V +W+  ++         E   LF+ ++  + Q +  T+  +LSS   
Sbjct: 371 ARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSR 430

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                 GKQ+ +   ++     + + + LI +Y KCGQV  A  IF+ +  +D V WNSM
Sbjct: 431 LGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSM 490

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+G + +    +A D    M E  + P   + AS++   +   S+ Q  Q+H+ ++K G+
Sbjct: 491 ISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGY 550

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  +   LI  Y K   +++++   + +  KN V  N +           +A+EL+  
Sbjct: 551 DQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEY 610

Query: 469 IWGSCREVNGSTFSIVLKACA 489
           +  + ++ +  TF  VL  C+
Sbjct: 611 MLTTKQKPDSVTFIAVLTGCS 631



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 22/366 (6%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           NA IS   + G +  AR +   +  +++VSWN++IA  + +G   +AL+M+  ML+  L 
Sbjct: 80  NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLA 139

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P  +T+AS+L A     +L    + H   +K G      + + L+  Y KC ++ ++ R+
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRL 199

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA----- 489
              +   N V   A+   L       +AL L+  +  +   V+    S VL ACA     
Sbjct: 200 FDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAG 259

Query: 490 ---AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
                  ++  ++IH L ++  +  D  V ++++D+Y K   +++A + F  +   S+  
Sbjct: 260 DYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVS 319

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN ++ GY Q GCY     +   M + G +P+E+TY  +L SC  A  V  AR     + 
Sbjct: 320 WNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIP 379

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID------QMPIPPDAHIWQSLLSACTIY 660
                 P +  +     LL   G  E  + TID         + PD      +LS+C+  
Sbjct: 380 K-----PSVTTWNT---LLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRL 431

Query: 661 GNIDLG 666
           GN +LG
Sbjct: 432 GNFELG 437



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 200/488 (40%), Gaps = 79/488 (16%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG----------------- 257
           L N ++ LY   G    A++ F  +  P+V S++  I+AAC                   
Sbjct: 47  LLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRN 106

Query: 258 -----------------VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
                             EA  +++ +         +T+ ++LS+ G    L  G++   
Sbjct: 107 AVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHG 166

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              KVG      + N L+ MY KCG V DA  +FD +   + VS+ +M+ G ++ G  + 
Sbjct: 167 LAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDD 226

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSN--------SKSLKQAMQVHSHIIKSGFLLDD 412
           AL +F  M    +  +   ++S+L A +         +++++ A  +H+ +++ GF  D 
Sbjct: 227 ALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQ 286

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + L+  Y K   ++E+ +V   +   + V  N L +      C+  A+E+   +  S
Sbjct: 287 HVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQES 346

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             E N  T+S +L +C                +KAR                    +  A
Sbjct: 347 GFEPNEVTYSNMLASC----------------IKAR-------------------DVPSA 371

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +  F KI + S+  WN ++ GY Q   + E  +LF +M    V+PD  T   +L+SC   
Sbjct: 372 RAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRL 431

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G     +   S    L  L   +   + ++D+  + G + G  + I  M    D   W S
Sbjct: 432 GNFELGKQVHSASVRLL-LHNDMFVASGLIDIYSKCGQV-GIALIIFNMMTERDVVCWNS 489

Query: 653 LLSACTIY 660
           ++S   I+
Sbjct: 490 MISGLAIH 497



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 165/362 (45%), Gaps = 15/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++   + ++G   + +  + +++   K  D   A R +FD      + T+N L+SG  + 
Sbjct: 338 EVLEFMQESGFEPNEVTYSNMLASCIKARDVPSA-RAMFDKIPKPSVTTWNTLLSGYGQE 396

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                 + LF R+++Q ++PD  T + ++ +C  L   E+   VH   ++L   + +++ 
Sbjct: 397 ELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVA 456

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           SG I+ Y+K G++  A + F    + D V + +M+ G   +   +++ +   +MR  G+ 
Sbjct: 457 SGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMF 516

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             E S  +++        + +G Q+H   +K G+   V  ++  +++++Y + G   DA 
Sbjct: 517 PTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNV--YVGCSLIDMYAKSGNMDDAR 574

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             F+ +   ++V+W+E I        G +A  LF+ +     + +  T I +L+      
Sbjct: 575 LFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSG 634

Query: 291 IL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++  A     +     G   +V     LI    +  +  +  ++   + +K D + W  +
Sbjct: 635 LVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVL 694

Query: 349 IA 350
           +A
Sbjct: 695 LA 696



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 21/263 (7%)

Query: 497 GKAIHCL-ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           G   H L A +A    +++  +A I   C+ G +  A+    ++   +   WN ++   A
Sbjct: 59  GLPCHALRAFRALPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVA 118

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           + G   E   ++  M + G+ P   T  +VL++C     + + R         HGL  ++
Sbjct: 119 RSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRR-------CHGLAVKV 171

Query: 616 ---EHYACIVDLLG---RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
               H      LLG   + G +  A    D MP P +   + +++      G +D  L  
Sbjct: 172 GLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVS-FTAMMGGLAQGGAVDDALRL 230

Query: 670 GSKL----LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY-SWIHVG 724
            +++    + + P   S+ VL +   A AG +N    ++       L    G+ S  HVG
Sbjct: 231 FARMSRTGIRVDPVAVSS-VLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVG 289

Query: 725 GYTHHFYAGDSSHSQSKEIYKEL 747
                 YA      ++ ++++ L
Sbjct: 290 NSLVDLYAKGMKMDEAIKVFESL 312


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 197/570 (34%), Positives = 305/570 (53%), Gaps = 11/570 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++ G Q+H   +K+GF  G    LNN ++++Y +CG+   A ++FD + E +VVSW+  +
Sbjct: 216 LRGGVQLHAALMKLGF--GSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALM 273

Query: 252 AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                  +  E   LF ++R +    NE+T+   L + GG    RAG QI   C + GF 
Sbjct: 274 VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGG--TRAGVQIHGVCVRTGFE 331

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + N+L+ MY K     DAR +FD +  ++  +WNSMI+GY+  G    +L +F  M
Sbjct: 332 GHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREM 391

Query: 369 -LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKC 425
                  P+ +T AS+L+A S   + ++  QVH+ +   G     + I    L+  Y KC
Sbjct: 392 QRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC 451

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
           + L  + +V   ++++NA+    +           EA+ L+R  W S    +G   S V+
Sbjct: 452 HRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVV 511

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
              A    +EQGK +HC   K     D+ V ++++DMY KCG   +A R FR++   ++ 
Sbjct: 512 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 571

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W AM+ G  +HG   E  +LF +M   GV+ DE+ YLA+L++C H+GLV E R Y S +
Sbjct: 572 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 631

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
                + P+ EHYAC+VDLLGR G L  AK  I  MP+ P   +WQ+LLSAC ++ ++ +
Sbjct: 632 CQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAV 691

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G   G  LL +  DN   YV+LSN+ A AG W +   +R  M+ K L K+ G SW  V  
Sbjct: 692 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 751

Query: 726 YTHHFY-AGDSSHSQSKEIYKELIKLYEHM 754
             H FY  GD +H Q+ +I + L ++   M
Sbjct: 752 EVHFFYGGGDDAHPQAGDIRRALREVEARM 781



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 230/473 (48%), Gaps = 21/473 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL+    +H   +KLGF S   L +  I+ YAK G++  A   F    + + V++TA++ 
Sbjct: 215 SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 274

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGV 211
           G++ +GE  +   +F EMR  G   NEF+L+A L A     + G QIHG  V+ GF    
Sbjct: 275 GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGH- 333

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL- 267
            + + N+++ +Y +     DA ++FD I   ++ +W+  I   A A  G ++  +F+++ 
Sbjct: 334 -DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 392

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS--IGNALISMYGKCG 325
           R +D Q +E+T  +LL +  G    R G Q+ A     G     +  +  AL+ +Y KC 
Sbjct: 393 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCH 452

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
           ++  A  +FD L  ++++ W ++I G+++ G   +A+ +F       +  +G+ ++S++ 
Sbjct: 453 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVA 512

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
             ++   ++Q  QVH +  K+   LD S+ + L+  Y KC    E+ R   E+  +N V 
Sbjct: 513 VFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVS 572

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
             A+ + +       EA++L+  +     E +   +  +L AC+       G    C   
Sbjct: 573 WTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS-----HSGLVDECRRY 627

Query: 506 KARYDQDIFVE------SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
            +R  QD  +       + ++D+  + G + +AK     +  +   G W  ++
Sbjct: 628 FSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 680



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 217/456 (47%), Gaps = 11/456 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+K G   D +L+  LI  + K      A         R+++++ AL+ G     
Sbjct: 221 QLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHG 280

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-VHGVCLKLGFSSRVYLVSGF 119
           ++   L+LF  +R  G  P+ FT S+ +KACG      + +HGVC++ GF     + +  
Sbjct: 281 EARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSL 340

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEM-RSLGLEL 177
           +  Y+K      A   F D +   N+A + +M+ GY   G+   S  VF EM R    + 
Sbjct: 341 VVMYSKGRWTGDARRVF-DVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 399

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+  ++L A   +   +EG Q+H      G        L  A++++YV+C +   A++
Sbjct: 400 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 459

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +   + + W+  I   A +G   EA  LF+    +  + + + + ++++      +
Sbjct: 460 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 519

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ+  +  K      VS+ N+L+ MY KCG   +A   F  +  ++ VSW +MI G
Sbjct: 520 VEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMING 579

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++G   +A+D+F  M    +  +     ++L A S+S  + +  +  S I +   +  
Sbjct: 580 VGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRP 639

Query: 412 DS-MISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +   +C++   G+   L E+K ++  +  +  V +
Sbjct: 640 KAEHYACMVDLLGRAGELREAKELILSMPMEPTVGV 675



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 4/247 (1%)

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           +L F  +     +A +L A +   SL+  +Q+H+ ++K GF  D  + + LI  Y KC  
Sbjct: 191 LLGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGK 250

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L+ +  V   + ++N V   AL    ++     E L L+  + GS    N  T S  LKA
Sbjct: 251 LHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKA 310

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C   T    G  IH + ++  ++    V ++++ MY K     DA+R F  I   +LA W
Sbjct: 311 CGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATW 368

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           N+M+ GYA  G   +   +F +M  +   +PDE T+ ++L +C   G  RE     + M+
Sbjct: 369 NSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA 428

Query: 607 DLHGLIP 613
            + G+ P
Sbjct: 429 -VRGVSP 434


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 201/693 (29%), Positives = 349/693 (50%), Gaps = 14/693 (2%)

Query: 77  LRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            +PD   F +L++ C S   +     VH      GF     +    I+ YA+ G +  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SF 190
             F      D  A+T M+  Y   G++D++  +F +M+   +   + +  A+L A   + 
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            +K+G +IHG  ++ GF   V   +  A++N+Y +CG    A   F  +   DVVSW+  
Sbjct: 121 SLKDGMEIHGQILQQGFEGDV--FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAM 178

Query: 251 IAAACDGVEAFGL----FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           IAA C   + F L    ++ ++ +    N+ T+  + ++ G    L  GK I +      
Sbjct: 179 IAA-CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV 237

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               V + N+ ++M+G  G + DAR +F+ ++ +D V+WN +I  Y +N  F +A+ +F 
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            + +  +  N  T   +L   ++  SL +   +H  + ++G+  D  + + L++ YG+C 
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCE 357

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           A  ++ ++  ++  K+ +    +           EAL+L++ +    R    +T   VL 
Sbjct: 358 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 417

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            CA +  L++G+ IH   ++  +  ++ VE+A+I+MY KCG + +A+  F K+ +  +  
Sbjct: 418 TCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILV 477

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN+M+  YAQHG Y E   LFN+M   G K D +++++VL++  H+G V +   Y   M 
Sbjct: 478 WNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAML 537

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLL-EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
               + P  E Y C+VDLLGR G + E   + +      PD  +W +LL AC  +   D 
Sbjct: 538 QDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQ 597

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
              A  ++LE  P +   YV+LSN+YA+AG W+ V ++RK M+ + + KEPG S I +  
Sbjct: 598 AKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILN 657

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
             H F  GD SH +   IY EL  L   M A  
Sbjct: 658 RVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAG 690



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/479 (21%), Positives = 206/479 (43%), Gaps = 42/479 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           IYSL+       D  +  + ++ F        A R   D  +RD++T+N +I+   +   
Sbjct: 229 IYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNEN 288

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
            G A++LF RL+  G++ +  TF  ++    +  SL + +++H +  + G+   V + + 
Sbjct: 289 FGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATA 348

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y +      A   F D    D + +T M   Y  NG   ++ ++F EM+  G    
Sbjct: 349 LMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPT 408

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L AVL        +++G QIH   ++ GF   +   +  A++N+Y +CG+  +A  +
Sbjct: 409 SATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMV--VETALINMYGKCGKMAEARSV 466

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+++ + D++ W+  + A A  G   E   LF  ++ +  + +  + +++LS++      
Sbjct: 467 FEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALS----- 521

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDARSIFDYL--IFKDSVS 344
            +G     + Y V  ++  SI         ++ + G+ G++ +A  I   L     D + 
Sbjct: 522 HSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGIL 581

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQA 396
           W +++     +   +QA      +LE        + ++ N Y  A   + V+  + L ++
Sbjct: 582 WMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRS 641

Query: 397 MQVHSHIIKSG---------FLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVH 445
             V     +S          FL  D         Y + + LN   R    I D K  +H
Sbjct: 642 RGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILH 700



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 49/90 (54%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S +I+NG  ++ ++ T LI+ + K      A         RDI+ +N+++   A+  
Sbjct: 430 QIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHG 489

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
                L+LF++++  G + DA +F S++ A
Sbjct: 490 YYDETLQLFNQMQLDGEKADAVSFVSVLSA 519


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 202/644 (31%), Positives = 334/644 (51%), Gaps = 12/644 (1%)

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLT 183
           K G+I  A   F      D +++T ++ GYV     +++  +F  M    GL+ ++F ++
Sbjct: 96  KLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVS 155

Query: 184 AVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
             L A     +V  GE +HGF VK G ++ V   +++A++++Y++ G+      +F+ +T
Sbjct: 156 VALKACALGMNVYFGELLHGFSVKSGLINSV--FVSSALVDMYMKVGKTEQGCSVFENMT 213

Query: 241 EPDVVSWSERIA----AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
             +VVSW+  I     A C  ++    F ++  +    + +T    L +     +L  GK
Sbjct: 214 TRNVVSWTAVIVGLVHAGC-SLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGK 272

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            I A   K GF E   + N L +MY KC + +    +F  +   D VSW ++I  Y + G
Sbjct: 273 AIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMG 332

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +ALD F  M +  + PN YT AS++ A +N    K   Q+H H ++ G +   S+ +
Sbjct: 333 DEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSN 392

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            +IT Y KC  L E+  V   + +K+ +  + + SV    S   EA      +     + 
Sbjct: 393 SIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKP 452

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N    + VL  C +M  LE GK +H  AL    D +  V SA+I MY + G +++A + F
Sbjct: 453 NEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIF 512

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
             I  + +  W AM+ GYA+HG   E  +LF  +S  G+ PD +T++ +LT+C HAGLV 
Sbjct: 513 DSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVD 572

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
               Y   M++ + + P  EHY CI+DLL R G L  A+  +  MP P D  +W +LL A
Sbjct: 573 LGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRA 632

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C  +G++D  + A  ++L L P++   ++ L+N+Y+++G   +   +RK MK K + KEP
Sbjct: 633 CRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEP 692

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAKL 760
           G+SWI+     + F AG  SH  SK+I   +++L    +  A+L
Sbjct: 693 GWSWINSNDQLNTFVAGVQSHPLSKQI-TTILELLRTSIGDARL 735



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 249/545 (45%), Gaps = 33/545 (6%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRY-QGLRPDAFTFSSLVKACG- 92
           R +F+   +RD I++  LI+G      S  AL LF  +    GL+ D F  S  +KAC  
Sbjct: 104 RDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACAL 163

Query: 93  --SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
             ++   E++HG  +K G  + V++ S  ++ Y K G+       F +    + V++TA+
Sbjct: 164 GMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAV 223

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGF 207
           + G V  G        F EM    +  +  +    L AS +   +  G+ IH   +K GF
Sbjct: 224 IVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGF 283

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLF 264
                 ++ N +  +Y +C +    +++F +++ PDVVSW+  I       D   A   F
Sbjct: 284 --NETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAF 341

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           K +R +D   NEYT  +++S+     I + G+QI     ++G ++ +S+ N++I++Y KC
Sbjct: 342 KRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKC 401

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G + +A  +FD +  KD +SW+++I+ Y +     +A +    M      PN + +AS+L
Sbjct: 402 GLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVL 461

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               +   L+   QVH++ +  G   +  + S LI+ Y +   L E+ ++   I   + V
Sbjct: 462 SVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIV 521

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLE------Q 496
              A+ +         EA+ L+  I       +  TF  +L AC  A + DL        
Sbjct: 522 SWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLM 581

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI---CRDSLAGWNAMMMG 553
                    K  Y         +ID+ C+ G + +A+   R +   C D +  W+ ++  
Sbjct: 582 TNEYQIAPSKEHY-------GCIIDLLCRAGRLSEAEHMVRNMPFPCDDVV--WSTLLRA 632

Query: 554 YAQHG 558
              HG
Sbjct: 633 CRDHG 637



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 198/432 (45%), Gaps = 11/432 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND-F 272
           N+ +   ++ G+  +A  MF++++  D +SW+  IA    A +  EA  LF ++  +   
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           Q +++ +   L +      +  G+ +  F  K G +  V + +AL+ MY K G+     S
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F+ +  ++ VSW ++I G    G     L  F  M    +  + +T A  L+A + S  
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L     +H+  IK GF     +++ L T Y KC   +   R+  ++   + V    L   
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V       AL+ ++ +  S    N  TF+ V+ ACA +   + G+ IH  AL+      
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA 387

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V +++I +Y KCG +++A   F  + R  +  W+ ++  Y Q     E  N  + MS+
Sbjct: 388 LSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSR 447

Query: 573 FGVKPDEITYLAVLTSCCHAGLV---REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
            G KP+E    +VL+ C    L+   ++   Y  C+    GL  +   ++ ++ +  R G
Sbjct: 448 EGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCI----GLDHETMVHSALISMYSRSG 503

Query: 630 LLEGAKMTIDQM 641
            L+ A    D +
Sbjct: 504 NLQEASKIFDSI 515



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 3/342 (0%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSL 373
           N+ +    K G++ +AR +F+ +  +D +SW ++IAGY      N+AL +F +M ++  L
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             + + ++  L+A +   ++     +H   +KSG +    + S L+  Y K     +   
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V   +  +N V   A+   LV+A C  + L  +  +W S    +  TF++ LKA A    
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GKAIH   +K  +++  +V + +  MY KC   +   R F K+    +  W  ++M 
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y Q G      + F +M K  V P+E T+ +V+++C +  + +           L GL+ 
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRL-GLVD 386

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            L     I+ L  + GLL+ A +  D M    D   W +++S
Sbjct: 387 ALSVSNSIITLYSKCGLLQEASLVFDGM-TRKDIISWSTIIS 427



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 182/405 (44%), Gaps = 29/405 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  IK G +    +  TL + ++K        R        D++++  LI    +   
Sbjct: 274 IHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGD 333

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              AL  F R+R   + P+ +TF+S++ AC +L   +  E +HG  L+LG    + + + 
Sbjct: 334 EERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNS 393

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y+K G +  A + F      D ++++ ++  Y       ++      M   G + N
Sbjct: 394 IITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPN 453

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+L +VL   G+   ++ G+Q+H + + +G       H  +A++++Y R G   +A K+
Sbjct: 454 EFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVH--SALISMYSRSGNLQEASKI 511

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD I   D+VSW+  I    +     EA  LF+++       +  T I +L++     ++
Sbjct: 512 FDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLV 571

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDARSIFDYLIFK-DSVSW 345
             G     F Y         I  +      +I +  + G++++A  +   + F  D V W
Sbjct: 572 DLG-----FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVW 626

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNG----YTMASILEA 386
           ++++    ++G  ++A+     ML   L PN      T+A+I  A
Sbjct: 627 STLLRACRDHGDLDRAIWAAEQMLR--LHPNSAGAHITLANIYSA 669


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 198/675 (29%), Positives = 348/675 (51%), Gaps = 13/675 (1%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV--YLVSGFIENYAKSGEIVSAEM 134
           D++  + L++ C   G  +    VH   ++ G  +++  +  +  +  YAK G + +A  
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            F    + + V++  +V GY   G F+++  +F  ++  G E+N F LT +L     +  
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165

Query: 195 GEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
                 IH    K+G        + +++++ Y  CG    A  +FD I   D V+W+  +
Sbjct: 166 PGLTCCIHACACKLGHDRNA--FVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +   +     +A   F  +R    + N + + ++L +         GK I     K    
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD 283

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               +G AL+ MY KCG + DAR++F+ +   D + W+ +I+ Y+++    QA +MF  M
Sbjct: 284 TEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +  S++PN ++++ +L+A +N   L    Q+H+ +IK G+  +  + + L+  Y KC  +
Sbjct: 344 MRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNM 403

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             S  +   +   N V  N +      +    +AL +++ +  +       TFS VL+AC
Sbjct: 404 ENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRAC 463

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A    ++    IH L  K+ ++ D  V +++ID Y KCG I DA + F  I +  +  WN
Sbjct: 464 ANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWN 523

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           A++ GYA HG   +   LFN+M+K   KP+++T++A+L+ C   GLV +  +  + M+  
Sbjct: 524 AIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMD 583

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           H + P ++HY CIV LLGR G L  A   I  +P  P   +W++LLS+C ++ N+ LG  
Sbjct: 584 HRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKF 643

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           +  K+LE++P +E+TYVLLSN+YA+AG+ + V  LRK M+   + KE G SW+ + G  H
Sbjct: 644 SAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVH 703

Query: 729 HFYAGDSSHSQSKEI 743
            F  G + H   + I
Sbjct: 704 AFSVGSADHPDMRII 718



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 197/413 (47%), Gaps = 35/413 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           I+   +K     +P +   L+  + K     D R  F  +    + D+I ++ LIS  A+
Sbjct: 273 IHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEII---PHDDVILWSFLISRYAQ 329

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             Q+  A ++F R+    + P+ F+ S +++AC +   L   + +H + +KLG+ S +++
Sbjct: 330 SYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFV 389

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  ++ YAK   + ++   FR   D + V++  ++ GY  +G  + +  VF EMR+  +
Sbjct: 390 GNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHV 449

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKL 230
              + + ++VL A   +  +K   QIH    K  F +   VCN L    ++ Y +CG   
Sbjct: 450 LSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSL----IDTYAKCGCIR 505

Query: 231 DAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA+K+F+ I + DVVSW+  I+  A  G   +A  LF  +  +D + N+ T + LLS  G
Sbjct: 506 DALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCG 565

Query: 288 GERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSW 345
              ++  G  +  +          +     ++ + G+ G++NDA + I D       + W
Sbjct: 566 STGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVW 625

Query: 346 NSMIAGYSENGFFNQALDMFC--HMLE--------FSLIPNGYTMASILEAVS 388
            ++++    +   N AL  F    +LE        + L+ N Y  A IL+ V+
Sbjct: 626 RALLSSCVVHK--NVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVA 676



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L+IK G+  +  +   L+  + K  +   +       ++ + +++N +I G   +C
Sbjct: 373 QIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVG---YC 429

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           QSG    AL +F  +R   +     TFSS+++AC    S++    +H +  K  F++   
Sbjct: 430 QSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTI 489

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ YAK G I  A   F   +  D V++ A++ GY  +G    + E+F  M    
Sbjct: 490 VCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSD 549

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            + N+ +  A+L   G++  V +G  +         +    +H    I+ L  R G+  D
Sbjct: 550 TKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHY-TCIVRLLGRAGRLND 608

Query: 232 AVKMFDEI-TEPDVVSW 247
           A+K   +I + P  + W
Sbjct: 609 ALKFIGDIPSTPSPMVW 625


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 207/641 (32%), Positives = 340/641 (53%), Gaps = 40/641 (6%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLG 174
           I +Y ++G    A   F+      +V+Y  M+ GY+ NGEF+ ++++F EM      S  
Sbjct: 71  ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +  +     LG + ++ E          +     VC+   N +++ Y + G   DA  
Sbjct: 131 VMIKGYVRNRNLGKARELFE----------IMPERDVCSW--NTMLSGYAQNGCVDDARS 178

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E + VSW+  ++A        EA  LFK  R N      + +++    +GG   
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-REN------WALVSWNCLLGG--F 229

Query: 292 LRAGKQIQA--FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           ++  K ++A  F   +   +VVS  N +I+ Y + G++++AR +FD    +D  +W +M+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY +N    +A ++F  M E + +     +A  ++         + M++   +      
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG--------ERMEMAKELFDVMPC 340

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            + S  + +IT Y +C  ++E+K +  ++ K++ V   A+ +    +    EAL L+  +
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                 +N S+FS  L  CA +  LE GK +H   +K  Y+   FV +A++ MYCKCG+I
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E+A   F+++    +  WN M+ GY++HG        F  M + G+KPD+ T +AVL++C
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H GLV + R Y   M+  +G++P  +HYAC+VDLLGR GLLE A   +  MP  PDA I
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL A  ++GN +L   A  K+  ++P+N   YVLLSNLYAS+G W DVGKLR  M++
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K + K PGYSWI +   TH F  GD  H +  EI+  L +L
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 207/457 (45%), Gaps = 41/457 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL- 72
           D +    +I  + +  +  +A         RD+ ++N ++SG A+      A  +FDR+ 
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184

Query: 73  -----RYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSG------ 118
                 +  L       S + +AC   +  E   +V   CL  GF  +  +V        
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244

Query: 119 -----------FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
                       I  YA+SG+I  A   F +    D   +TAMV GY+ N   ++++E+F
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304

Query: 168 VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVR 225
            +M     E NE S  A+L       +GE++     K  F    C +++  N ++  Y +
Sbjct: 305 DKM----PERNEVSWNAMLAGYV---QGERME--MAKELFDVMPCRNVSTWNTMITGYAQ 355

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           CG+  +A  +FD++ + D VSW+  IA    +    EA  LF  +     ++N  +  + 
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           LS+      L  GKQ+     K G+     +GNAL+ MY KCG + +A  +F  +  KD 
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN+MIAGYS +GF   AL  F  M    L P+  TM ++L A S++  + +  Q    
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535

Query: 403 IIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           + +  G + +    +C++   G+   L ++  ++  +
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 127/576 (22%), Positives = 250/576 (43%), Gaps = 35/576 (6%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           IS + +      A R          ++YN +ISG  R  +   A KLFD +  + L    
Sbjct: 71  ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130

Query: 82  FTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
                 V+     +  E+   +  +    S   ++SG    YA++G +  A   F    +
Sbjct: 131 VMIKGYVRNRNLGKARELFE-IMPERDVCSWNTMLSG----YAQNGCVDDARSVFDRMPE 185

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGF 201
            ++V++ A++  YV N + +++  +F    +  L     S   +LG     K+  +   F
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQF 241

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV--- 258
              +     V     N I+  Y + G+  +A ++FDE    DV +W+  ++         
Sbjct: 242 FDSMNVRDVVS---WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSS-VGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           EA  LF  +     + NE +   +L+  V GER+     ++    + V     VS  N +
Sbjct: 299 EARELFDKMP----ERNEVSWNAMLAGYVQGERM-----EMAKELFDVMPCRNVSTWNTM 349

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I+ Y +CG++++A+++FD +  +D VSW +MIAGYS++G   +AL +F  M       N 
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            + +S L   ++  +L+   Q+H  ++K G+     + + L+  Y KC ++ E+  +  E
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ V  N + +          AL  + ++     + + +T   VL AC+    +++G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529

Query: 498 KAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMM 552
           +       +   D  +   S     ++D+  + G +EDA    + +  +  A  W  ++ 
Sbjct: 530 RQYFYTMTQ---DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
               HG         +K+  F ++P+      +L++
Sbjct: 587 ASRVHGNTELAETAADKI--FAMEPENSGMYVLLSN 620



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 50/393 (12%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSG 63
           +L K+  +   +    L+  F K      A +F FD+ N RD++++N +I+G A+  +  
Sbjct: 209 MLFKSRENWALVSWNCLLGGFVKKKKIVEARQF-FDSMNVRDVVSWNTIITGYAQSGKID 267

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ----------------ENEIVHGVCL-- 105
            A +LFD    Q    D FT++++V   G +Q                 NE+     L  
Sbjct: 268 EARQLFDESPVQ----DVFTWTAMV--SGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321

Query: 106 -----KLGFSSRVYLV---------SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
                ++  +  ++ V         +  I  YA+ G+I  A+  F      D V++ AM+
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFL 208
            GY  +G   ++  +FV+M   G  LN  S ++ L    DV   + G+Q+HG  VK G+ 
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFK 265
           +G    + NA++ +Y +CG   +A  +F E+   D+VSW+  IA       G  A   F+
Sbjct: 442 TGC--FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKC 324
            ++    + ++ TM+ +LS+     ++  G+Q         G M        ++ + G+ 
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559

Query: 325 GQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
           G + DA ++   + F+ D+  W +++     +G
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 165/351 (47%), Gaps = 32/351 (9%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  IS Y + G+ N+A  +F  +    SVS+N MI+GY  NG F  A  +F  M E  L+
Sbjct: 68  NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
               +   +++    +++L +A ++   + +      ++M+S     Y +   +++++ V
Sbjct: 128 ----SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLS----GYAQNGCVDDARSV 179

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              + +KN V  NAL S  V  S   EA  L+++     RE     +++V   C     +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-----RE----NWALVSWNCLLGGFV 230

Query: 495 EQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           ++ K +         + +D+   + +I  Y + G I++A++ F +     +  W AM+ G
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y Q+    E   LF+KM     + +E+++ A+L     AG V+  R  ++   +L  ++P
Sbjct: 291 YIQNRMVEEARELFDKMP----ERNEVSWNAML-----AGYVQGERMEMA--KELFDVMP 339

Query: 614 --QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
              +  +  ++    + G +  AK   D+MP   D   W ++++  +  G+
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 389



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 47/91 (51%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  L+K G+     +   L+  + K      A     +   +DI+++N +I+G +R  
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL+ F+ ++ +GL+PD  T  +++ AC
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSAC 520



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D DI   +  I  Y + G   +A R F+++ R S   +N M+ GY ++G +     LF++
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE--HYACIVDLLGR 627
           M     + D +++  ++      G VR     L    +L  ++P+ +   +  ++    +
Sbjct: 121 MP----ERDLVSWNVMIK-----GYVRNRN--LGKARELFEIMPERDVCSWNTMLSGYAQ 169

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            G ++ A+   D+MP   D   W +LLSA
Sbjct: 170 NGCVDDARSVFDRMPEKNDVS-WNALLSA 197


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 218/695 (31%), Positives = 362/695 (52%), Gaps = 20/695 (2%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D      L++AC    SL++ +++H   + LG  + ++L    I  Y        A+  F
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61

Query: 137 RDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVL---GASFD 191
            +  +   ++ +  ++ GY  N  + ++ E+F ++     L+ + ++  +VL   G  + 
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
              G+ IH   VK G +  +   + ++++ +Y +C     A+ +F+E+ E DV  W+  I
Sbjct: 122 YVLGKMIHTCLVKTGLMMDIV--VGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 252 AAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
           +         + +E FGL +  RF  F+ N  T+   +SS      L  G +I       
Sbjct: 180 SCYYQSGNFKEALEYFGLMR--RFG-FEPNSVTITTAISSCARLLDLNRGMEIHEELINS 236

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           GF+    I +AL+ MYGKCG +  A  +F+ +  K  V+WNSMI+GY   G     + +F
Sbjct: 237 GFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLF 296

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M    + P   T++S++   S S  L +   VH + I++    D  + S L+  Y KC
Sbjct: 297 KRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKC 356

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             +  ++ +   I K   V  N + S  V      EAL L+  +  S  E +  TF+ VL
Sbjct: 357 GKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVL 416

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            AC+ +  LE+G+ IH L ++ + D +  V  A++DMY KCG +++A   F+ + +  L 
Sbjct: 417 TACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W +M+  Y  HG  +    LF +M +  +KPD +T+LA+L++C HAGLV E   Y + M
Sbjct: 477 SWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQM 536

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNID 664
            +++G+IP++EHY+C++DLLGR G L  A   + Q P I  D  +  +L SAC ++ NID
Sbjct: 537 VNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNID 596

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           LG      L++  PD+ STY+LLSN+YASA  W++V  +R +MKE  L K PG SWI + 
Sbjct: 597 LGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEIN 656

Query: 725 GYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
                F+  D+SH   + ++K L  L +HM   +K
Sbjct: 657 QKILPFFVEDNSHLHLELVFKCLSYLSDHMEDESK 691



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 252/512 (49%), Gaps = 27/512 (5%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQE---NEIV 100
           +I  +N L++G  +      AL+LF++L  Y  L+PD++T+ S++KACG L +    +++
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   +K G    + + S  +  YAK      A   F +  + D   +  ++  Y  +G F
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
            ++ E F  MR  G E N  ++T  + +     D+  G +IH   +  GFL  + + +++
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFL--LDSFISS 246

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQI 274
           A++++Y +CG    A+++F+++ +  VV+W+  I+      D +    LFK +     + 
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKP 306

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
              T+ +L+        L  GK +  +  +      V I ++L+ +Y KCG+V  A +IF
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIF 366

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +     VSWN MI+GY   G   +AL +F  M +  + P+  T  S+L A S   +L+
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALE 426

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  ++H+ II+     ++ ++  L+  Y KC A++E+  V   + K++ V   ++  +  
Sbjct: 427 KGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSM--ITA 484

Query: 455 YASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALK 506
           Y S H +   ALEL+  +  S  + +  TF  +L AC     +++G     + ++   + 
Sbjct: 485 YGS-HGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGII 543

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            R +      S +ID+  + G + +A    ++
Sbjct: 544 PRVEH----YSCLIDLLGRAGRLHEAYEILQQ 571



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 169/350 (48%), Gaps = 24/350 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  LI +G  LD  +S+ L+  + K      A         + ++ +N++ISG     
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKG 287

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S   ++LF R+  +G++P   T SSL+  C     L E + VHG  ++    S V++ S
Sbjct: 288 DSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G++  AE  F+       V++  M+ GYV  G+  ++  +F EMR   +E 
Sbjct: 348 SLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEP 407

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  + T+VL A      +++GE+IH   ++    +     +  A++++Y +CG   +A  
Sbjct: 408 DAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNN--EVVMGALLDMYAKCGAVDEAFS 465

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAF---GLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + D+VSW+  I A     +A+    LF ++  ++ + +  T + +LS+ G   +
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGL 525

Query: 292 LRAGKQIQAFCYKV-------GFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  G      CY         G +  V   + LI + G+ G++++A  I 
Sbjct: 526 VDEG------CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 211/691 (30%), Positives = 348/691 (50%), Gaps = 47/691 (6%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH   LKL     ++L +  I  Y K G +  A+  F      + V+YTA++ G+  +  
Sbjct: 119 VHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDW 176

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
            D++ E+F  M   G+E NE++  A+L A   + D + G Q+HG  VK+G LS  C  + 
Sbjct: 177 EDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLS--CVFIC 234

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRF-NDF 272
           NA+M LY +CG     +++F+E+ E D+ SW+  I++        EAF  F+ ++     
Sbjct: 235 NALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGL 294

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +++ +++  LL++  G      G+Q+ A   KVG    +S+ ++LI  Y KCG  ND   
Sbjct: 295 KVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTD 354

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFN-------------------------------QA 361
           +F+ +  +D ++W  MI  Y E G  +                               +A
Sbjct: 355 LFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRA 414

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L++F  MLE  +  +  T+ SI+ A    KS K + Q+   ++K G L +  + + L+  
Sbjct: 415 LELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDM 474

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA--EALELYRTIWGSCREVNGS 479
           Y +C  + +++++  +   +N       + +  YA      EA+ L+ +       V   
Sbjct: 475 YTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDE 534

Query: 480 TFSI-VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
             S  +L  C ++   E GK +HC ALK+    +  V +A + MY KC  ++DA R F  
Sbjct: 535 VMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNT 594

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA--GLVR 596
           +    +  WN ++ G+  H    +   ++ KM K G+KPD IT+  ++++  H    LV 
Sbjct: 595 MNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVD 654

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             R+    M   H + P LEHYA  + +LGR GLLE A+ TI  MP+ PD ++W++LL++
Sbjct: 655 SCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I  N  L  LA   +L ++P +  +Y+L SNLY+++G W    K+R++M+EK   K P
Sbjct: 715 CRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHP 774

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             SWI      H FYA D SH Q K+IY  L
Sbjct: 775 SQSWIIHENKIHSFYARDRSHPQGKDIYSGL 805



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 135/587 (22%), Positives = 274/587 (46%), Gaps = 52/587 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L   LIS + K    R A +        ++++Y ALISG ++      A++LF  + 
Sbjct: 129 DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAML 188

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+ P+ +TF +++ AC      Q    VHG+ +KLG  S V++ +  +  Y K G + 
Sbjct: 189 DSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLD 248

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGA- 188
                F +  + D  ++  ++   V   ++D++ + F  M+   GL+++ FSL+ +L A 
Sbjct: 249 LVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTAC 308

Query: 189 --SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             S    +G+Q+H   +KVG  S +   ++++++  Y +CG   D   +F+ +   DV++
Sbjct: 309 AGSVKPMKGQQLHALALKVGLESHL--SVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT 366

Query: 247 WSERIAAAC----------------------------------DGVEAFGLFKDLRFNDF 272
           W+  I +                                    DG  A  LF ++     
Sbjct: 367 WTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGV 426

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +I++ T+ +++++ G  +  +  +QIQ F  K G +    I  AL+ MY +CG++ DA  
Sbjct: 427 EISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEK 486

Query: 333 IFDYLIFKDSVS--WNSMIAGYSENGFFNQALDMF-CHMLEFSLIPNGYTMASILEAVSN 389
           IF     ++  +    SMI GY+ NG  N+A+ +F     E +++ +     SIL    +
Sbjct: 487 IFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGS 546

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
               +   Q+H H +KSG + +  + +  ++ Y KC  ++++ RV + ++ ++ V  N L
Sbjct: 547 IGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGL 606

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +  V      +AL +++ +  +  + +  TF++++ A    T+L    +   L +    
Sbjct: 607 VAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISA-YKHTELNLVDSCRSLFVSMET 665

Query: 510 DQDIFVE----SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           + +I       ++ I +  + G +E+A++  R +     +  W A++
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++   +K+G   +  +    +S ++K  +   A R +F+T N +DI+++N L++G    
Sbjct: 555 QMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVR-VFNTMNMQDIVSWNGLVAGHVLH 613

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
            Q   AL ++ ++   G++PD+ TF+ ++ A
Sbjct: 614 WQGDKALGIWKKMEKAGIKPDSITFALIISA 644


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 211/637 (33%), Positives = 335/637 (52%), Gaps = 44/637 (6%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLG 174
           I +Y ++G    A   F+      +V+Y AM+ GY+ NGEF+ ++ +F EM      S  
Sbjct: 66  ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWN 125

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +  +     LG + ++ E                VC+   N I++ Y + G   DA +
Sbjct: 126 VMIKGYVRNRNLGKARELFERMPERD----------VCSW--NTILSGYAQNGCVDDARR 173

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E + VSW+  ++A        EA  LF   R N      + +++    +GG   
Sbjct: 174 VFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS-REN------WALVSWNCLLGG--F 224

Query: 292 LRAGKQIQA--FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           ++  K ++A  F   +   +VVS  N +I+ Y + G++++AR +FD     D  +W +M+
Sbjct: 225 VKKKKIVEARQFFDSMKVRDVVSW-NTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMV 283

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL--EAVSNSKSLKQAMQVHSHIIKSG 407
           +GY +N    +A ++F  M E + +     +A  +  E V  +K L   M          
Sbjct: 284 SGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR------- 336

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              + S  + +IT Y +C  ++E+K +  ++ K++ V   A+ +    +    EAL L+ 
Sbjct: 337 ---NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFV 393

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +      +N S+FS  L  CA +  LE GK +H   +K  Y+   FV +A++ MYCKCG
Sbjct: 394 LMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 453

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           +IE+A   F+++    +  WN M+ GY++HG   E    F  M + G+KPD+ T +AVL+
Sbjct: 454 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLS 513

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H GLV + R Y   M+  +G+ P  +HYAC+VDLLGR GLLE A   +  MP  PDA
Sbjct: 514 ACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDA 573

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW +LL A  ++GN +L   A  K+  ++P+N   YVLLSNLYAS+G W DVGKLR  M
Sbjct: 574 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 633

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           ++K + K PGYSWI +   TH F  GD  H +  EI+
Sbjct: 634 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 670



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 212/470 (45%), Gaps = 41/470 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++  +L       D +    +I  + +  +  +A         RD+ ++N ++SG A+  
Sbjct: 107 ELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNG 166

Query: 61  QSGPALKLFDRL------RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS 111
               A ++FDR+       +  L       S L +AC   GS +   +V   CL  GF  
Sbjct: 167 CVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVK 226

Query: 112 RVYLVSG-----------------FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           +  +V                    I  YA++GEI  A   F +    D   +TAMV GY
Sbjct: 227 KKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGY 286

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH 214
           + N   ++++E+F  M     E NE S  A+L       +GE++     K  F    C +
Sbjct: 287 IQNRMVEEARELFDRM----PERNEVSWNAMLAGYV---QGERVE--MAKELFDVMPCRN 337

Query: 215 LN--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRF 269
           ++  N ++  Y +CG+  +A  +FD++ + D VSW+  IA    +    EA  LF  +  
Sbjct: 338 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMER 397

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              ++N  +  + LS+      L  GKQ+     K G+     +GNAL+ MY KCG + +
Sbjct: 398 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 457

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A  +F  +  KD VSWN+MIAGYS +GF  +AL  F  M    L P+  TM ++L A S+
Sbjct: 458 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH 517

Query: 390 SKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +  + +  Q  H+     G   +    +C++   G+   L E+  ++  +
Sbjct: 518 TGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 159/352 (45%), Gaps = 17/352 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +   T+I+ + +  +   A +   ++   D+ T+ A++SG  +      A +LFDR+ 
Sbjct: 244 DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM- 302

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-VYLVSGFIENYAKSGEIVSA 132
                P+    S      G +Q   +     L      R V   +  I  YA+ G+I  A
Sbjct: 303 -----PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 357

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
           +  F      D V++ AM+ GY  +G   ++  +FV M   G  LN  S ++ L    DV
Sbjct: 358 KNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADV 417

Query: 193 ---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
              + G+Q+HG  VK G+ +G    + NA++ +Y +CG   +A  +F E+   D+VSW+ 
Sbjct: 418 VALELGKQLHGRLVKGGYETGC--FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 475

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKV 305
            IA       G EA   F+ ++    + ++ TM+ +LS+     ++  G+Q         
Sbjct: 476 MIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDY 535

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
           G          ++ + G+ G + +A ++   + F+ D+  W +++     +G
Sbjct: 536 GVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHG 587



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 167/354 (47%), Gaps = 38/354 (10%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  IS Y + G+ ++A  +F  +    SVS+N+MI+GY  NG F  A  +F  M E  L+
Sbjct: 63  NVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLV 122

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
               +   +++    +++L +A ++   + +     D    + +++ Y +   +++++RV
Sbjct: 123 ----SWNVMIKGYVRNRNLGKARELFERMPER----DVCSWNTILSGYAQNGCVDDARRV 174

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              + +KN V  NAL S  V  S   EA  L+       RE     +++V   C     +
Sbjct: 175 FDRMPEKNDVSWNALLSAYVQNSKLEEACVLF-----GSRE----NWALVSWNCLLGGFV 225

Query: 495 EQGKAIHCL----ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           ++ K +       ++K R   D+   + +I  Y + G I++A++ F +     +  W AM
Sbjct: 226 KKKKIVEARQFFDSMKVR---DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAM 282

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + GY Q+    E   LF++M     + +E+++ A+L     AG V+  R  ++   +L  
Sbjct: 283 VSGYIQNRMVEEARELFDRMP----ERNEVSWNAML-----AGYVQGERVEMA--KELFD 331

Query: 611 LIP--QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           ++P   +  +  ++    + G +  AK   D+MP   D   W ++++  +  G+
Sbjct: 332 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 384



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D DI   +  I  Y + G   +A R F+++ R S   +NAM+ GY ++G +     LF++
Sbjct: 56  DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE--HYACIVDLLGR 627
           M     + D +++  ++      G VR     L    +L   +P+ +   +  I+    +
Sbjct: 116 MP----ERDLVSWNVMIK-----GYVRNRN--LGKARELFERMPERDVCSWNTILSGYAQ 164

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            G ++ A+   D+MP   D   W +LLSA
Sbjct: 165 NGCVDDARRVFDRMPEKNDVS-WNALLSA 192


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 220/671 (32%), Positives = 354/671 (52%), Gaps = 20/671 (2%)

Query: 75  QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +G++ D  TF  ++K C     + +   VHGV  KLGF + VY+ +  +  Y   G +  
Sbjct: 4   RGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLND 63

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGLELNEFSLTAVLGAS 189
           A   F +  + D V++  ++     NG++ +++  +  M  RS+ ++ N  S+ ++L  S
Sbjct: 64  ARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLLPIS 122

Query: 190 FDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             +++ E   +IH + VKVG  S V     NA+++ Y +CG      ++F+E  E + VS
Sbjct: 123 AALEDEEMTRRIHCYSVKVGLDSQVTTC--NALVDAYGKCGSVKALWQVFNETVEKNEVS 180

Query: 247 WSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  I   AC G   +A   F+ +     Q N  T+ ++L  +      +AGK+I  F  
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           ++G    + I N+LI MY K G   +A +IF  L  ++ VSWN+MIA Y+ N    +A+ 
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
               M E    PN  T  ++L A +    L    ++H+  ++ G   D  + + LI  Y 
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYA 360

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCH--AEALELYRTIWGSCREVNGSTF 481
           KC  L+ ++ V +   +K+ V  N L  ++ Y+      ++L L+  +    ++ +  +F
Sbjct: 361 KCGCLHSARNVFN-TSRKDEVSYNIL--IIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             V+ ACA +  L+QGK +H +AL+      +FV ++++D Y KCG I+ A R F +I  
Sbjct: 418 VGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILF 477

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             +A WN M++GY   G      ++F  M    V+ D ++Y+AVL++C H GLV     Y
Sbjct: 478 KDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQY 537

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            S M     L P   HY C+VDLLGR G +E A   I Q+PI PDA+IW +LL AC IYG
Sbjct: 538 FSEML-AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYG 596

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N++LG  A   L EL+P +   Y+LLSN+YA  G W++  K+R+ MK +   K PG SW+
Sbjct: 597 NVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWV 656

Query: 722 HVGGYTHHFYA 732
            +    H F A
Sbjct: 657 QIYDQVHAFVA 667



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/551 (21%), Positives = 260/551 (47%), Gaps = 17/551 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++ ++ K G   D  +  TL+  +        A R   +   RD++++N +I  L+   
Sbjct: 31  EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNG 90

Query: 61  QSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
               A   +  +  +  ++P+  +  SL+    +L++ E+   +H   +K+G  S+V   
Sbjct: 91  DYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTC 150

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K G + +    F + ++ + V++ +++ G    G    +   F  M   G +
Sbjct: 151 NALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQ 210

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +++++L    ++   K G++IHGF +++G  + +   + N+++++Y + G   +A 
Sbjct: 211 PNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDI--FIANSLIDMYAKSGHSTEAS 268

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  +   ++VSW+  IA        +EA      ++      N  T  N+L +     
Sbjct: 269 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 328

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK+I A   ++G    + + N+LI MY KCG ++ AR++F+    KD VS+N +I 
Sbjct: 329 FLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILII 387

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GYSE     Q+L++F  M      P+  +   ++ A +N  +LKQ  +VH   +++    
Sbjct: 388 GYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYS 447

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH--AEALELYRT 468
              + + L+  Y KC  ++ + R+ ++I  K+    N +  +L Y        A+ ++  
Sbjct: 448 HLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTM--ILGYGMIGELETAISMFEA 505

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + +  ++  VL AC+    +E+G       L  R +      + ++D+  + G 
Sbjct: 506 MRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGF 565

Query: 529 IEDAKRAFRKI 539
           +E+A +  +++
Sbjct: 566 VEEAAKLIQQL 576


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 188/539 (34%), Positives = 296/539 (54%), Gaps = 10/539 (1%)

Query: 226 CGQKLD-----AVKMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINE 276
           C Q L      A+ +  ++  P++  ++  I        D +E   ++K +       + 
Sbjct: 66  CAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDN 125

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           YT+  +L +    R +R G+++     K+G    V + N L+ MY  C  +  AR +FD 
Sbjct: 126 YTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDT 185

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
              +D VSW +MI GY + GF  + + +F  M   +L  +G T+  +L + +    L+  
Sbjct: 186 SPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLG 245

Query: 397 MQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
            ++H +II+ S   LD  + + L+  Y KC   N +++V  E+  KN V  N++ S L  
Sbjct: 246 RKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQ 305

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                E+L ++R +     + +  T   VL +CA +  LE GK +H    + +   D F+
Sbjct: 306 KGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFI 365

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            +A++DMY KCG+I+ A   F+ + R  +  + AM++G A HG   +  +LF++M K G+
Sbjct: 366 GNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGI 425

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           +PDE+T++ VLT+C H GLV E R Y   MS ++ L PQLEHY C+VDLLGR GL+  A+
Sbjct: 426 EPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAE 485

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
             I  MPI PDA +  +LL AC I+G ++LG     K+ +++P  +  YVL+SN+Y+SA 
Sbjct: 486 EFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSAN 545

Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            W D  KLRK MKE+ L K PG S I + G  H F  GD SH + KEIYK L ++  H+
Sbjct: 546 RWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHL 604



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 226/464 (48%), Gaps = 38/464 (8%)

Query: 1   QIYSLLIKNGHHLDPILS-TTLISHFTKFA---DFRRAFRFLFDTQNRDIITYNALISGL 56
           QI++ +IK     D  L+ +T +S     +   D R A   L   +  ++  YNA+I GL
Sbjct: 40  QIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGL 99

Query: 57  ARFCQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSR 112
           A     S   L ++ ++  +G+ PD +T   ++KAC    +++E E VHG  +K+G +S 
Sbjct: 100 ATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASD 159

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VY+ +  +  YA    I SA   F      D V++T M+ GYV  G   +   +F EM  
Sbjct: 160 VYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCG 219

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             L+ +  +L  VL +     D++ G ++H + ++   ++ +   + NA++++Y++CG  
Sbjct: 220 ENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVN-LDVFVGNALVDMYLKCGDA 278

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A K+F E+   +VVSW+  I+         E+  +F+ ++    + ++ T++ +L+S 
Sbjct: 279 NFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSC 338

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               +L  GK + A+  +        IGNAL+ MY KCG ++ A  +F  +  KD  S+ 
Sbjct: 339 ANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYT 398

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI G + +G   +ALD+F  M +  + P+  T   +L A S           H  +++ 
Sbjct: 399 AMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS-----------HVGLVEE 447

Query: 407 G--FLLDDSMI----------SCLITTYGKCNALNESKRVLSEI 438
           G  +  D S I           C++   G+   +NE++  +  +
Sbjct: 448 GRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNM 491



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 20/321 (6%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKR----VLS 436
           S L  +   KS+K   Q+H+ IIK+     D+ ++        C  +L    R    +L+
Sbjct: 24  SFLSTLQTCKSIKGLKQIHASIIKT-MPSPDAQLTISTRLSALCAQSLPIDPRYALSLLA 82

Query: 437 EIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           ++   N    NA+   L  ++  + E L +Y+ +       +  T   VLKACA    + 
Sbjct: 83  QLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVR 142

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           +G+ +H  A+K     D++V + ++ MY  C  I  A++ F    +  L  W  M+ GY 
Sbjct: 143 EGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYV 202

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART---YLSCMSDLHGLI 612
           + G   E   LF +M    ++ D +T + VL+SC   G +R  R    Y+   S+++   
Sbjct: 203 KMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVN--- 259

Query: 613 PQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
             L+ +    +VD+  + G    A+    +MP+  +   W S++S     G     L   
Sbjct: 260 --LDVFVGNALVDMYLKCGDANFARKVFQEMPV-KNVVSWNSMISGLAQKGQFKESLYMF 316

Query: 671 SKL--LELQPDNESTYVLLSN 689
            K+  L ++PD+ +   +L++
Sbjct: 317 RKMQRLGVKPDDVTLVAVLNS 337


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 212/766 (27%), Positives = 384/766 (50%), Gaps = 16/766 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I+  +IK G   +  L   L+S + K      A +   +  +R +  +  +IS   +  
Sbjct: 44  HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   AL LF+ +   G  P+ FTFSS+V++C  L++      VHG  +K GF     + S
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              + Y+K G+   A   F    + D +++T M+   V   ++ ++ + + EM   G+  
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223

Query: 178 NEFSLTAVLGAS--FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           NEF+   +LGAS    ++ G+ IH   +  G    V   L  ++++ Y +  +  DAV++
Sbjct: 224 NEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVV--LKTSLVDFYSQFSKMEDAVRV 281

Query: 236 FDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            +   E DV  W+  ++     +   EA G F ++R    Q N +T   +LS     R L
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN-DARSIFDYLIFKDSVSWNSMIAG 351
             GKQI +   KVGF +   +GNAL+ MY KC     +A  +F  ++  + VSW ++I G
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             ++GF      +   M++  + PN  T++ +L A S  + +++ +++H+++++    +D
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH--VD 459

Query: 412 DSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
             M+  + L+  Y     ++ +  V+  + +++ +   +L +       H  AL +   +
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
           +G    ++  +    + A A +  LE GK +HC ++K+ +     V ++++DMY KCG++
Sbjct: 520 YGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSL 579

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           EDAK+ F +I    +  WN ++ G A +G      + F +M     +PD +T+L +L++C
Sbjct: 580 EDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC 639

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            +  L      Y   M  ++ + PQ+EHY  +V +LGR G LE A   ++ M + P+A I
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 699

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           +++LL AC   GN+ LG    +K L L P + + Y+LL++LY  +G      K R  M E
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSH-SQSKEIYKELIKLYEHM 754
           K L K+ G S + V G  H F + D +   ++  IY E+  + E +
Sbjct: 760 KRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEI 805



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 1/297 (0%)

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           R G  I     K G +E + + N L+S+Y K   + +AR +FD +  +   +W  MI+ +
Sbjct: 40  RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +++  F  AL +F  M+     PN +T +S++ + +  + +    +VH  +IK+GF  + 
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S L   Y KC    E+  + S +   + +    + S LV A    EAL+ Y  +  +
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               N  TF  +L A ++   LE GK IH   +      ++ ++++++D Y +   +EDA
Sbjct: 220 GVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            R         +  W +++ G+ ++    E    F +M   G++P+  TY A+L+ C
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 5/301 (1%)

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           S S +  + +H  +IK G L +  + + L++ Y K + +  ++++  E+  +       +
Sbjct: 36  SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVM 95

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S    +   A AL L+  +  S    N  TFS V+++CA + D+  G  +H   +K  +
Sbjct: 96  ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           + +  V S++ D+Y KCG  ++A   F  +       W  M+        + E    +++
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M K GV P+E T++ +L +    GL  E    +     + G+   +     +VD   +  
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACT--IYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            +E A   ++      D  +W S++S     +     +G     + L LQP+N +   +L
Sbjct: 274 KMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332

Query: 688 S 688
           S
Sbjct: 333 S 333


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 193/650 (29%), Positives = 355/650 (54%), Gaps = 9/650 (1%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           ++  +  I  Y KSG +  A   F        V +T ++ GY  N +F ++  +F+EM  
Sbjct: 132 IFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR 191

Query: 173 LGLELNEFSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G++ +  SL  +L     FD V E  Q+H   +K+G+ S +   ++N++++ Y +    
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLV--VSNSLLDSYCKTRSL 249

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++F++I E D V+++  +          EA  LF  ++   ++  E+T   +L++ 
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  G+Q+  F  K  F+  V + NAL+  Y K  +V +A  +F  +   D +S+N
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            ++  Y+ NG   ++L++F  +         +  A++L   + S +L    Q+HS  I +
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
             + +  + + L+  Y KC    E+ R+ S++  +++V   A+ S  V    H + L+L+
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             +  +    + +T++ +++ACA++  L  GK +H   + + Y  ++F  SA++DMY KC
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC 549

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G+I+DA + F+++   +   WNA++  YAQ+G       LF +M + G++PD ++ L++L
Sbjct: 550 GSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL 609

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
            +C H GLV E   Y   M+ ++ L+P+ EHYA  +D+L R G  + A+  + QMP  PD
Sbjct: 610 CACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPD 669

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRK 705
             +W S+L++C I+ N +L   A ++L  ++   + + YV +SN+YA+AG W++VGK++K
Sbjct: 670 EIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKK 729

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            M+E+ + K P YSW+ +   TH F A D +H Q +EI K+L +L E MV
Sbjct: 730 AMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMV 779



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 280/595 (47%), Gaps = 60/595 (10%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFD 70
           H +   + T+I  + K  +   A R LFD+   R  +T+  LI G A+  Q   A  LF 
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEA-RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFI 187

Query: 71  RLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
            +   G+ PD  + ++L+       S+ E   VH   +KLG+ S + + +  +++Y K+ 
Sbjct: 188 EMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTR 247

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            +  A   F D  + D+V + A++ GY   G   ++  +F +M+ +G    EF+  A+L 
Sbjct: 248 SLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILT 307

Query: 188 ASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A     D++ G+Q+HGF VK  F+  V   + NA+++ Y +  + ++A K+F E+ E D 
Sbjct: 308 AGIQLDDIEFGQQVHGFVVKCNFVWNV--FVANALLDFYSKHDRVVEASKLFYEMPEVDG 365

Query: 245 VSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           +S++  +   A +G   E+  LFK+L+F  F    +    LLS       L  G+QI + 
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
                 +  + +GN+L+ MY KCG+  +A  IF  L  + SV W +MI+ Y + G     
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDG 485

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L +F  M    +  +  T ASI+ A ++  SL    Q+HSHII SG++ +    S L+  
Sbjct: 486 LKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDM 545

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC ++ ++ ++  E+  +N+V  NAL S           L L+  +  S  + +  + 
Sbjct: 546 YAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSL 605

Query: 482 SIVLKACAAMTDLEQG-------KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +L AC+    +E+G         I+ L  K  +       ++ IDM C+ G  ++A++
Sbjct: 606 LSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEH------YASTIDMLCRGGRFDEAEK 659

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                                              M++   +PDEI + +VL SC
Sbjct: 660 L----------------------------------MAQMPFEPDEIMWSSVLNSC 680



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 217/407 (53%), Gaps = 11/407 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +IK G+    ++S +L+  + K      AF+   D   RD +T+NAL++G ++  
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  A+ LF +++  G RP  FTF++++ A   L + E    VHG  +K  F   V++ +
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVAN 338

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K   +V A   F +  ++D ++Y  +V  Y WNG   +S E+F E++  G + 
Sbjct: 339 ALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDR 398

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
             F   +L ++   S ++  G QIH   +    +S +   + N+++++Y +CG+  +A +
Sbjct: 399 RNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEIL--VGNSLVDMYAKCGEFGEANR 456

Query: 235 MFDEITEPDVVSWSERIAAACD-GVEAFG--LFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++     V W+  I++    G+   G  LF +++      +  T  +++ +      
Sbjct: 457 IFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLAS 516

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ+ +     G++  V  G+AL+ MY KCG + DA  +F  +  ++SVSWN++I+ 
Sbjct: 517 LTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISA 576

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           Y++NG  +  L +F  M+   L P+  ++ SIL A S+   +++ +Q
Sbjct: 577 YAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQ 623



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/527 (23%), Positives = 239/527 (45%), Gaps = 52/527 (9%)

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV------------------ 244
           +K GF      + +N ++  +++ G    A K+FDE+   ++                  
Sbjct: 93  IKTGFNPNT--YRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSE 150

Query: 245 -------------VSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
                        V+W+  I          EAFGLF ++  +    +  ++  LLS    
Sbjct: 151 ARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTE 210

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +   +Q+ +   K+G+   + + N+L+  Y K   +  A  +F+ +  +DSV++N++
Sbjct: 211 FDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNAL 270

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + GYS+ GF  +A+++F  M E    P  +T A+IL A      ++   QVH  ++K  F
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNF 330

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           + +  + + L+  Y K + + E+ ++  E+ + + +  N L +   +     E+LEL++ 
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKE 390

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +  +     F+ +L   A   +L+ G+ IH   +      +I V ++++DMY KCG 
Sbjct: 391 LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGE 450

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
             +A R F  +   S   W AM+  Y Q G + +   LF +M +  +  D  TY +++ +
Sbjct: 451 FGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRA 510

Query: 589 CCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           C        +   L+    LH      G I  +   + +VD+  + G ++ A     +MP
Sbjct: 511 CA-------SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP 563

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLL 687
           +  ++  W +L+SA    G+ D  L    +++   LQPD+ S   +L
Sbjct: 564 V-RNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL 609



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/324 (22%), Positives = 148/324 (45%), Gaps = 35/324 (10%)

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD--------------- 341
            + A   K GF       N L+  + + G +N AR +FD +  K+               
Sbjct: 87  HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146

Query: 342 ----------------SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
                           +V+W  +I GY++N  F +A  +F  M    + P+  ++A++L 
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNA 443
             +   S+ +  QVHSH+IK G+  D +++  + L+ +Y K  +L  + ++ ++I ++++
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGY--DSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDS 264

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           V  NAL +       + EA+ L+  +          TF+ +L A   + D+E G+ +H  
Sbjct: 265 VTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGF 324

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
            +K  +  ++FV +A++D Y K   + +A + F ++       +N ++  YA +G   E 
Sbjct: 325 VVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKES 384

Query: 564 SNLFNKMSKFGVKPDEITYLAVLT 587
             LF ++   G       +  +L+
Sbjct: 385 LELFKELQFTGFDRRNFPFATLLS 408


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 222/734 (30%), Positives = 378/734 (51%), Gaps = 58/734 (7%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           KF  F R+           I   N L++ L++  Q   A KLFD++     + D +++++
Sbjct: 46  KFMAFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMP----QKDEYSWNT 101

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           +                                I +Y   G +V A   F  C    ++ 
Sbjct: 102 M--------------------------------ISSYVNVGRLVEARELFDGCSCKSSIT 129

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +++++ GY   G   ++ ++F  MR  G + ++F+L +VL        ++ GE IHGF V
Sbjct: 130 WSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVV 189

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--EITEPDVVSWSERI---AAACDGV 258
           K GF   V   +   ++++Y +C    +A  +F   E    + V W+  +   A   DG 
Sbjct: 190 KNGFEGNV--FVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           +A   F+ +     + N+YT   +L++         G+Q+  F  K GF   V + +AL+
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALV 307

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY KCG + +A+++ + +   D VSWNS++ G+  +G   +AL +F +M   ++  + Y
Sbjct: 308 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY 367

Query: 379 TMASILEA-VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           T  S+L   V  S + K    VH  IIK+GF     + + L+  Y K   ++ +  V  +
Sbjct: 368 TFPSVLNCCVVGSINPKS---VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK 424

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI--VLKACAAMTDLE 495
           + +K+ +   +L +     + H E+L+++  +      VN   F +  +L ACA +T LE
Sbjct: 425 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDM--RVTGVNPDQFIVASILSACAELTLLE 482

Query: 496 QGKAIHCLALKA--RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            GK +H   +K+  R+ Q ++  ++++ MY KCG ++DA   F  +    +  W A+++G
Sbjct: 483 FGKQVHLDFIKSGLRWSQSVY--NSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVG 540

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           YAQ+G        ++ M   G +PD IT++ +L +C HAGLV E R Y   M+ ++G+ P
Sbjct: 541 YAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKP 600

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EHYAC++DL GR G L+ AK  +DQM + PDA +W+SLLSAC ++ N++L   A + L
Sbjct: 601 GPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNL 660

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            EL+P N   YV+LSN+Y+++  WNDV K+RK MK K + KEPG SW+ +    + F + 
Sbjct: 661 FELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISD 720

Query: 734 DSSHSQSKEIYKEL 747
           D  H +  EIY ++
Sbjct: 721 DRGHPREAEIYTKI 734



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 276/531 (51%), Gaps = 22/531 (4%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGL 77
            T+IS +        A R LFD  + +  IT++++ISG  +F     A  LF  +R +G 
Sbjct: 100 NTMISSYVNVGRLVEA-RELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGW 158

Query: 78  RPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           +   FT  S+++ C SL   Q  E++HG  +K GF   V++V+G ++ YAK   +  AE 
Sbjct: 159 KASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEF 218

Query: 135 CFRDCLDLD---NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
            F+  L+ D   +V +TAMV GY  NG+  K+ E F  M + G+E N+++   +L A   
Sbjct: 219 LFKG-LEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSS 277

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW- 247
           V     GEQ+HGF VK GF S V  ++ +A++++Y +CG   +A  M + + + DVVSW 
Sbjct: 278 VLARCFGEQVHGFIVKSGFGSNV--YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWN 335

Query: 248 SERIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
           S  +     G+  EA  LFK++   + +I++YT  ++L+      I    K +     K 
Sbjct: 336 SLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKT 393

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           GF     + NAL+ MY K G ++ A ++F+ ++ KD +SW S++ GY++N    ++L +F
Sbjct: 394 GFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIF 453

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
           C M    + P+ + +ASIL A +    L+   QVH   IKSG     S+ + L+  Y KC
Sbjct: 454 CDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKC 513

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             L+++  +   +  K+ +   A+            +L+ Y  +  S    +  TF  +L
Sbjct: 514 GCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLL 573

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
            AC+    +++G+  +   +   Y      E  + +ID++ + G +++AK+
Sbjct: 574 FACSHAGLVDEGRK-YFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQ 623



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 235/454 (51%), Gaps = 20/454 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF---DTQNRDIITYNALISGLAR 58
           I+  ++KNG   +  + T L+  + K      A  FLF   +   ++ + + A+++G A+
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEA-EFLFKGLEFDRKNHVLWTAMVTGYAQ 242

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYL 115
                 A++ F  +  QG+  + +TF +++ AC S+      E VHG  +K GF S VY+
Sbjct: 243 NGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYV 302

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  ++ YAK G++ +A+       D D V++ +++ G+V +G  +++  +F  M    +
Sbjct: 303 QSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 362

Query: 176 ELNEFSLTAVLG----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++++++  +VL      S + K    +HG  +K GF +     ++NA++++Y + G    
Sbjct: 363 KIDDYTFPSVLNCCVVGSINPK---SVHGLIIKTGFEN--YKLVSNALVDMYAKTGDMDC 417

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F+++ E DV+SW+  +          E+  +F D+R      +++ + ++LS+   
Sbjct: 418 AYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAE 477

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             +L  GKQ+     K G     S+ N+L++MY KCG ++DA +IF  +  KD ++W ++
Sbjct: 478 LTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAI 537

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
           I GY++NG    +L  +  M+     P+  T   +L A S++  + +  +    + K  G
Sbjct: 538 IVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYG 597

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
                   +C+I  +G+   L+E+K++L ++D K
Sbjct: 598 IKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVK 631



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 183/361 (50%), Gaps = 13/361 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G   +  + + L+  + K  D + A   L   ++ D++++N+L+ G  R  
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSG 118
               AL+LF  +  + ++ D +TF S++  C  GS+     VHG+ +K GF +   + + 
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS-VHGLIIKTGFENYKLVSNA 404

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK+G++  A   F   L+ D +++T++V GY  N   ++S ++F +MR  G+  +
Sbjct: 405 LVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPD 464

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F + ++L A  +   ++ G+Q+H   +K G        + N+++ +Y +CG   DA  +
Sbjct: 465 QFIVASILSACAELTLLEFGKQVHLDFIKSGLRWS--QSVYNSLVAMYAKCGCLDDADAI 522

Query: 236 FDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  +   DV++W+  I   A    G  +   +  +  +  + +  T I LL +     ++
Sbjct: 523 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 582

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
             G++  Q      G          +I ++G+ G++++A+ + D +  K D+  W S+++
Sbjct: 583 DEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 642

Query: 351 G 351
            
Sbjct: 643 A 643


>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 760

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 216/719 (30%), Positives = 359/719 (49%), Gaps = 58/719 (8%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           K  D   A         RD++++N +IS L R      AL ++ R+   G  P  FT +S
Sbjct: 70  KVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLAS 129

Query: 87  LVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS-AEMCFRDCLDL 142
           ++ AC  +Q+  I    HGV +K G    +++ +  +  YAK G +V      F    + 
Sbjct: 130 VLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEP 189

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-------- 194
           + V++T ++ G     +  ++  +F  M   G++++   L+ +L  S   +         
Sbjct: 190 NEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIY 249

Query: 195 ----GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
               G+QIH   ++ GF+  +  HLNN+++ +Y +      A  +F E+ E +VVSW+  
Sbjct: 250 GNVLGKQIHSLALRRGFVGEL--HLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIM 307

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           IA         ++    K +R + F+ NE T I++L +                C++   
Sbjct: 308 IAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGA----------------CFR--- 348

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                            G V   R IF+ +      +WN+M++GYS    + +A++ F  
Sbjct: 349 ----------------SGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQ 392

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M   +L P+  T++ IL + +  + L+   Q+H   I++    D  ++S LI  Y +C  
Sbjct: 393 MQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEK 452

Query: 428 LNESKRVLSE-IDKKNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGSTFSIVL 485
           +   + +  + I++ +    N++ S L   +   +AL L+R +   S    N +T++IVL
Sbjct: 453 MEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVL 512

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +C+ +  L  G+  H   +K+ Y  D FVE+AV DMYCKCG IE A++ F  + R +  
Sbjct: 513 GSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTV 572

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN M+ GYA +G   E  +L+ +M   G KPD IT+++VLT+C H+GLV      LS M
Sbjct: 573 IWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSM 632

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
              HG+ P+L+HY CIVD LGR G LE A+   +  P    + +W+ LLS+C +YG++ L
Sbjct: 633 QRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSL 692

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
                 KL+ L P N + YVLLSN Y+S   W+D   L++ M +  + K PG+SWI  G
Sbjct: 693 ARRVAEKLMHLDPQNSAAYVLLSNTYSSVRQWDDAAALQELMNKNRVHKTPGHSWITYG 751



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 252/558 (45%), Gaps = 69/558 (12%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTK---FADFR-RAFRFLFDTQNRDIITYNALISGLAR 58
           + + +K G   +  +   L+S + K     D+  R F  L +      +++  +ISGLAR
Sbjct: 147 HGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNE---VSFTTVISGLAR 203

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLV------KACGSLQE------NEIVHGVCLK 106
             +   A+ +F  +  +G++ D    S+++      + C SL E       + +H + L+
Sbjct: 204 ENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALR 263

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
            GF   ++L +  +E YAK+ ++  AE+ F +  +++ V++  M+ G+      DKS E 
Sbjct: 264 RGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEY 323

Query: 167 FVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
              MR  G E NE +  ++LGA F                                  R 
Sbjct: 324 LKRMRDSGFEPNEVTCISILGACF----------------------------------RS 349

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
           G      ++F+ I +P V +W+  ++   +     EA   F+ ++F + + +  T+  +L
Sbjct: 350 GDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVIL 409

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DS 342
           SS    R L  GKQI     +    E   I + LI++Y +C ++     IFD  I + D 
Sbjct: 410 SSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDI 469

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHS 401
             WNSMI+G   N    +AL +F  M + S L+PN  T A +L + S   SL    Q H 
Sbjct: 470 ACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHG 529

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            ++KSG++ D  + + +   Y KC  +  +++    + +KN V  N +     +     E
Sbjct: 530 QVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDE 589

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA--- 518
           A++LYR +  +  + +G TF  VL AC+    ++ G     L + +   +D  +E     
Sbjct: 590 AVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTG-----LEILSSMQRDHGIEPELDH 644

Query: 519 ---VIDMYCKCGTIEDAK 533
              ++D   + G +EDA+
Sbjct: 645 YICIVDCLGRAGRLEDAE 662



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 254/568 (44%), Gaps = 73/568 (12%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VY  + F+    K G++  A   F    + D V++  M+   V  G  +K+ +V+  M  
Sbjct: 58  VYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVG 117

Query: 173 LGLELNEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G   + F+L +VL A   V++G    + HG  VK G    +   + NA++++Y +CG  
Sbjct: 118 DGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNI--FVGNALLSMYAKCGFM 175

Query: 230 LD-AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLS- 284
           +D  V++F+ ++EP+ VS++  I+        +EA  +F+ +     Q++   + N+LS 
Sbjct: 176 VDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSI 235

Query: 285 SVGGE----------RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           SV  E           +L  GKQI +   + GF+  + + N+L+ +Y K   +N A  IF
Sbjct: 236 SVPREGCDSLSEIYGNVL--GKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIF 293

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +   + VSWN MIAG+ +    +++++    M +    PN  T  SIL A   S  ++
Sbjct: 294 TEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVE 353

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
                                                +R+ + I + +    NA+ S   
Sbjct: 354 TG-----------------------------------RRIFNTIPQPSVSAWNAMLSGYS 378

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               + EA+  +R +     + + +T S++L +CA +  LE GK IH +A++    +D  
Sbjct: 379 NYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSH 438

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRD-SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           + S +I +Y +C  +E  +  F     +  +A WN+M+ G  ++    +   LF +M + 
Sbjct: 439 IVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQT 498

Query: 574 GV-KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLG 626
            V  P+E TY  VL SC     +   R +       HG + +  + +       + D+  
Sbjct: 499 SVLLPNETTYAIVLGSCSRLCSLVHGRQF-------HGQVVKSGYVSDSFVETAVTDMYC 551

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           + G +E A+   D +    +  IW  ++
Sbjct: 552 KCGEIESARQFFDTVS-RKNTVIWNEMI 578



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 202/442 (45%), Gaps = 45/442 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+SL ++ G   +  L+ +L+  + K  D   A     +    +++++N +I+G  +  
Sbjct: 256 QIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEY 315

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +S  +++   R+R  G  P+  T  S++ AC                             
Sbjct: 316 RSDKSIEYLKRMRDSGFEPNEVTCISILGAC----------------------------- 346

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               +SG++ +    F         A+ AM+ GY     ++++   F +M+   L+ +  
Sbjct: 347 ---FRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRT 403

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-MF 236
           +L+ +L +   ++    G+QIHG  ++    +   +H+ + ++ +Y  C +K++  + +F
Sbjct: 404 TLSVILSSCARLRFLEGGKQIHGVAIRTE--TSEDSHIVSGLIAVYSEC-EKMEICECIF 460

Query: 237 DE-ITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQI-NEYTMINLLSSVGGERI 291
           D+ I E D+  W+  I+         +A  LF+ +      + NE T   +L S      
Sbjct: 461 DDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCS 520

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+Q      K G++    +  A+  MY KCG++  AR  FD +  K++V WN MI G
Sbjct: 521 LVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHG 580

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           Y+ NG  ++A+D++  M+     P+G T  S+L A S+S  +   +++ S + +  G   
Sbjct: 581 YAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEP 640

Query: 411 DDSMISCLITTYGKCNALNESK 432
           +     C++   G+   L +++
Sbjct: 641 ELDHYICIVDCLGRAGRLEDAE 662



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 178/420 (42%), Gaps = 79/420 (18%)

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------------DGV--- 258
           +L N +++LY+  G    A K+FDE++  DV SW+  +   C            DG+   
Sbjct: 28  YLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACEVFDGMPER 87

Query: 259 -------------------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
                              +A  ++  +  + F  + +T+ ++LS+    +    G +  
Sbjct: 88  DVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQDGVIGMRCH 147

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCG-QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
               K G  + + +GNAL+SMY KCG  V+    +F+ L   + VS+ ++I+G +     
Sbjct: 148 GVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKV 207

Query: 359 NQALDMFCHMLEFSLIPNGYTMASIL---------EAVSNSKSLKQAMQVHSHIIKSGFL 409
            +A+ MF  M E  +  +   +++IL         +++S         Q+HS  ++ GF+
Sbjct: 208 LEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFV 267

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +  + + L+  Y K   +N ++ + +E+ + N V  N + +         +++E  + +
Sbjct: 268 GELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRM 327

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             S  E N  T   +L AC    D+E G                                
Sbjct: 328 RDSGFEPNEVTCISILGACFRSGDVETG-------------------------------- 355

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
              +R F  I + S++ WNAM+ GY+ +  Y E  N F +M    +KPD  T   +L+SC
Sbjct: 356 ---RRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSC 412



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 173/403 (42%), Gaps = 52/403 (12%)

Query: 302 CYK---VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS----------- 347
           CY+    G      + N L+ +Y + G  + AR +FD +  +D  SWN+           
Sbjct: 15  CYRDERTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDL 74

Query: 348 --------------------MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
                               MI+     GF  +ALD++  M+    +P+ +T+AS+L A 
Sbjct: 75  EEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSAC 134

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN-ALNESKRVLSEIDKKNAVHI 446
           S  +     M+ H   +K+G   +  + + L++ Y KC   ++   RV   + + N V  
Sbjct: 135 SKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSF 194

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREV------NGSTFSIVLKACAAMTDLEQ---G 497
             + S L   +   EA+ ++R +     +V      N  + S+  + C +++++     G
Sbjct: 195 TTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLG 254

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K IH LAL+  +  ++ + ++++++Y K   +  A+  F ++   ++  WN M+ G+ Q 
Sbjct: 255 KQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQE 314

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
               +      +M   G +P+E+T +++L +C  +G V   R   + +       P +  
Sbjct: 315 YRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQ-----PSVSA 369

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLSAC 657
           +  ++         E A     QM    + PD      +LS+C
Sbjct: 370 WNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSC 412


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 216/682 (31%), Positives = 355/682 (52%), Gaps = 15/682 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           F++L  +C ++   + +H + L  G S  + L +  I  Y   G+I  +   F D +   
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTF-DYIHKK 83

Query: 144 NV-AYTAMVCGYVWNGEFDKSKEVFVEMRSL----GLELNEFSLTAVLGASFDVKEGEQI 198
           N+ ++ +++  YV  G++ ++     ++ S+     L  + ++   +L A   + +G+++
Sbjct: 84  NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKV 143

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC--- 255
           H    K+GF   V   +  ++++LY R G    A K+F ++   DV SW+  I+  C   
Sbjct: 144 HCCVFKMGFEDDV--FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +   A G+   ++    +++  T+ ++L        +  G  I     K G    V + N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI+MY K G++ DA+ +FD +  +D VSWNS+IA Y +N   + AL  F  M    + P
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP 321

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRV 434
           +  T+ S+    S     + +  +   +I+  +L  D +I + L+  Y K   +N +  V
Sbjct: 322 DLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTV 381

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMT 492
             ++ +K+ +  N L +        +EA++ Y  +   CR+   N  T+  ++ A + + 
Sbjct: 382 FDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVG 440

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L+QG  IH   +K     D+FV + +ID+Y KCG +EDA   F +I RD+   WNA++ 
Sbjct: 441 ALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIA 500

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
               HG   E   LF  M    VK D IT++++L++C H+GLV E +     M   +G+ 
Sbjct: 501 SLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIK 560

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P L+HY C+VDLLGR G LE A   +  MPI PDA IW +LLSAC IYGN +LG LA  +
Sbjct: 561 PSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDR 620

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           LLE+  +N   YVLLSN+YA+   W  V K+R   +++ L K PG+S + VG     FY 
Sbjct: 621 LLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYT 680

Query: 733 GDSSHSQSKEIYKELIKLYEHM 754
           G+ +H +  EIYKEL  L   M
Sbjct: 681 GNQTHPKYTEIYKELKVLSAKM 702



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 293/566 (51%), Gaps = 18/566 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           ++++LL+  G   + +LST LI+ +    D   + R  FD    ++I ++N++IS   RF
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLS-RSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 60  CQSGPAL----KLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
            +   A+    +LF       LRPD +TF  ++KAC SL + + VH    K+GF   V++
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFV 158

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y++ G +  A   F D    D  ++ AM+ G+  NG    +  V   M+  G+
Sbjct: 159 AASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGV 218

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +++  ++ ++L     S DV  G  IH   +K G  S V   ++NA++N+Y + G+  DA
Sbjct: 219 KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV--FVSNALINMYSKFGRLQDA 276

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD++   D+VSW+  IAA     D   A   FK ++    + +  T+++L S     
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336

Query: 290 RILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              R  + I  F  +  +++  V IGNAL++MY K G +N A ++FD L  KD++SWN++
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396

Query: 349 IAGYSENGFFNQALDMFCHMLE-FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           + GY++NG  ++A+D +  M E    IPN  T  SI+ A S+  +L+Q M++H+ +IK+ 
Sbjct: 397 VTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNS 456

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             LD  + +CLI  YGKC  L ++  +  EI +  +V  NA+ + L       EAL+L++
Sbjct: 457 LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFK 516

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +     + +  TF  +L AC+    +++G K    +  +      +     ++D+  + 
Sbjct: 517 DMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576

Query: 527 GTIEDAKRAFRKICRDSLAG-WNAMM 551
           G +E A    R +     A  W A++
Sbjct: 577 GYLEKAYELVRNMPIQPDASIWGALL 602


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 216/682 (31%), Positives = 355/682 (52%), Gaps = 15/682 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           F++L  +C ++   + +H + L  G S  + L +  I  Y   G+I  +   F D +   
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTF-DYIHKK 83

Query: 144 NV-AYTAMVCGYVWNGEFDKSKEVFVEMRSL----GLELNEFSLTAVLGASFDVKEGEQI 198
           N+ ++ +++  YV  G++ ++     ++ S+     L  + ++   +L A   + +G+++
Sbjct: 84  NIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKV 143

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC--- 255
           H    K+GF   V   +  ++++LY R G    A K+F ++   DV SW+  I+  C   
Sbjct: 144 HCCVFKMGFEDDV--FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +   A G+   ++    +++  T+ ++L        +  G  I     K G    V + N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI+MY K G++ DA+ +FD +  +D VSWNS+IA Y +N   + AL  F  M    + P
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP 321

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRV 434
           +  T+ S+    S     + +  +   +I+  +L  D +I + L+  Y K   +N +  V
Sbjct: 322 DLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTV 381

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMT 492
             ++ +K+ +  N L +        +EA++ Y  +   CR+   N  T+  ++ A + + 
Sbjct: 382 FDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVG 440

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L+QG  IH   +K     D+FV + +ID+Y KCG +EDA   F +I RD+   WNA++ 
Sbjct: 441 ALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIA 500

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
               HG   E   LF  M    VK D IT++++L++C H+GLV E +     M   +G+ 
Sbjct: 501 SLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIK 560

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P L+HY C+VDLLGR G LE A   +  MPI PDA IW +LLSAC IYGN +LG LA  +
Sbjct: 561 PSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDR 620

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           LLE+  +N   YVLLSN+YA+   W  V K+R   +++ L K PG+S + VG     FY 
Sbjct: 621 LLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYT 680

Query: 733 GDSSHSQSKEIYKELIKLYEHM 754
           G+ +H +  EIYKEL  L   M
Sbjct: 681 GNQTHPKYTEIYKELKVLSAKM 702



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 293/566 (51%), Gaps = 18/566 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           ++++LL+  G   + +LST LI+ +    D   + R  FD    ++I ++N++IS   RF
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLS-RSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 60  CQSGPAL----KLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
            +   A+    +LF       LRPD +TF  ++KAC SL + + VH    K+GF   V++
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFV 158

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y++ G +  A   F D    D  ++ AM+ G+  NG    +  V   M+  G+
Sbjct: 159 AASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGV 218

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +++  ++ ++L     S DV  G  IH   +K G  S V   ++NA++N+Y + G+  DA
Sbjct: 219 KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV--FVSNALINMYSKFGRLQDA 276

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD++   D+VSW+  IAA     D   A   FK ++    + +  T+++L S     
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336

Query: 290 RILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              R  + I  F  +  +++  V IGNAL++MY K G +N A ++FD L  KD++SWN++
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396

Query: 349 IAGYSENGFFNQALDMFCHMLE-FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           + GY++NG  ++A+D +  M E    IPN  T  SI+ A S+  +L+Q M++H+ +IK+ 
Sbjct: 397 VTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNS 456

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             LD  + +CLI  YGKC  L ++  +  EI +  +V  NA+ + L       EAL+L++
Sbjct: 457 LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFK 516

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +     + +  TF  +L AC+    +++G K    +  +      +     ++D+  + 
Sbjct: 517 DMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576

Query: 527 GTIEDAKRAFRKICRDSLAG-WNAMM 551
           G +E A    R +     A  W A++
Sbjct: 577 GYLEKAYELVRNMPIQPDASIWGALL 602


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 236/749 (31%), Positives = 375/749 (50%), Gaps = 32/749 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L   +G    P  +  L+S ++       A      +   D   +N+L+   +  C
Sbjct: 33  RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLR--SHHC 90

Query: 61  QSG--PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGF---SSR 112
            S    AL    R+R  G RP  FT      A   L    +   VH   +K G       
Sbjct: 91  ASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGS 150

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V + S  +  YA+ G +  A   F + ++ D VA+TA+V G V NGE  K     V+M  
Sbjct: 151 VAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIR 210

Query: 173 L----GLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           L    G   N  ++ + L   G   ++  G  +HG+ VK G     C  + +A+ ++Y +
Sbjct: 211 LAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRD--CALVVSALFSMYSK 268

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINL 282
           C    DA  +F E+TE DVVSW+  I A C      EA  LF+++  +  Q +E  +  +
Sbjct: 269 CDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCV 328

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           LS +G    +  GK   A   +  F + V I N+LISMYGK   V+ A ++F  L  +D 
Sbjct: 329 LSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDD 388

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSKSLKQAM 397
            SW+ M+AGY + G   + L+++  M      EF  + +  ++ S + + S    L+   
Sbjct: 389 ESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEF--LCDITSLVSAISSCSRLGRLRLGQ 446

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYA 456
            VH + IK   L ++S+ + LI  YG+C     + ++ +    +++ V  NAL S   + 
Sbjct: 447 SVHCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHV 505

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +AL LY  +     + N ST   V+ ACA +  LE G+ +H        + D+ + 
Sbjct: 506 GRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSIS 565

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++DMY KCG +  A+  F  + +  +  WN M+ GY  HG  ++   LF++M    +K
Sbjct: 566 TALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIK 625

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+ +T+LA+L++CCHAGLV E R     M   + L P L+HYAC+VDLLG+ GLL+ A+ 
Sbjct: 626 PNSLTFLAILSACCHAGLVDEGRKLFIRMGG-YRLEPNLKHYACMVDLLGKSGLLQEAED 684

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            +  MPI PD  +W +LLSAC ++ N ++GL    K     P N+  Y+L+SN Y SA  
Sbjct: 685 LVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEK 744

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           W+++ KLR  MK   + K  G+S + V G
Sbjct: 745 WDEIEKLRDTMKNYGVEKGVGWSAVDVWG 773


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 218/752 (28%), Positives = 386/752 (51%), Gaps = 18/752 (2%)

Query: 5    LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSG 63
            LL+      DP+  T LI  +  F     + R +F+     D   Y  LI          
Sbjct: 582  LLVTGRLRRDPLPVTKLIESYA-FMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLD 640

Query: 64   PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRVYLVSGF 119
             A+ L+ RL  +  +   F F S+++AC   +E+      VHG  +K G      + +  
Sbjct: 641  AAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSL 700

Query: 120  IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
            +  Y ++G +  AE  F      D VA++ +V   + N E  K+  +F  M   G+E + 
Sbjct: 701  LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDA 760

Query: 180  FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
             ++ +V+    ++   +    +HG   +  F       L N+++ +Y +CG  L + K+F
Sbjct: 761  VTMISVVEGCAELGCLRIARSVHGQITRKMF--DFDETLCNSLLTMYSKCGDLLSSEKIF 818

Query: 237  DEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            ++I + + VSW+  I++   G    +A   F ++  +  + N  T+ ++LSS G   ++R
Sbjct: 819  EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIR 878

Query: 294  AGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK +  F  +        S+  AL+ +Y +CG++ D  +I   +  ++ V WNS I+ Y
Sbjct: 879  EGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLY 938

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            +  G   +AL +F  M+ + + P+ +T+ASI+ A  N+  ++   Q+H H+I++  + D+
Sbjct: 939  AHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTD-VSDE 997

Query: 413  SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
             + + +I  Y K   +N +  V  +I  ++ V  N++           EA+ L+  ++ S
Sbjct: 998  FVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHS 1057

Query: 473  CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
            C E+N  TF  V++AC+++  LE+G+ +H   +     +D+F ++A+IDMY KCG +  A
Sbjct: 1058 CLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTA 1116

Query: 533  KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            +  FR +   S+  W++M+  Y  HG      + FN+M + G KP+E+ ++ VL++C H+
Sbjct: 1117 ETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 1176

Query: 593  GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
            G V E + Y + M  L G+ P  EH+AC +DLL R G L+ A  TI +MP   DA +W S
Sbjct: 1177 GSVEEGKYYFNLMK-LFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 1235

Query: 653  LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
            L++ C I+  +D+     + + ++  D+   Y LLSN+YA  G W +  ++R  MK   L
Sbjct: 1236 LVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNL 1295

Query: 713  CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
             K PGYS I +      F AG+ +  Q++EIY
Sbjct: 1296 KKVPGYSAIEIDKKVFRFGAGEETCFQTEEIY 1327



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 159/621 (25%), Positives = 300/621 (48%), Gaps = 18/621 (2%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            +++  +IK+G   D ++ T+L+  + +  +   A +       RD++ ++ L+S     C
Sbjct: 680  KVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENC 739

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   AL++F  +   G+ PDA T  S+V+ C   G L+    VHG   +  F     L +
Sbjct: 740  EVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCN 799

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLGLE 176
              +  Y+K G+++S+E  F      + V++TAM+  Y   GEF +K+   F EM   G+E
Sbjct: 800  SLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYN-RGEFSEKALRSFSEMLKSGIE 858

Query: 177  LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             N  +L ++L   G +  ++EG+ +HGF ++   L      L+ A++ LY  CG+  D  
Sbjct: 859  PNLVTLYSILSSCGLNGLIREGKSVHGFAIRRE-LDPNYESLSPALVELYAECGRLGDCE 917

Query: 234  KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             +   + + ++V W+  I+  A  G  +EA  LF+ +     + + +T+ +++S+     
Sbjct: 918  TILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTG 977

Query: 291  ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            ++R GKQI     +    +   + N++I MY K G VN A ++FD +  +  V+WNSM+ 
Sbjct: 978  LVRLGKQIHGHVIRTDVSDEF-VQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLC 1036

Query: 351  GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            G+S+NG   +A+++F +M    L  N  T  ++++A S+  SL++   VH  +I  G + 
Sbjct: 1037 GFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCG-IK 1095

Query: 411  DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
            D    + LI  Y KC  LN ++ V   +  ++ V  +++ +          A+  +  + 
Sbjct: 1096 DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMV 1155

Query: 471  GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
             S  + N   F  VL AC     +E+GK    L        +    +  ID+  + G ++
Sbjct: 1156 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACFIDLLSRSGDLK 1215

Query: 531  DAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            +A R  +++   + A  W +++ G   H     +  + N +S   +  D+  Y  +L++ 
Sbjct: 1216 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISD--IVTDDTGYYTLLSNI 1273

Query: 590  -CHAGLVREARTYLSCMSDLH 609
                G   E R   S M  L+
Sbjct: 1274 YAEEGEWEEFRRMRSAMKSLN 1294



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 151/364 (41%), Gaps = 51/364 (14%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLSEI 438
           M   +    +  SL+   Q+H+H++ +G L  D + ++ LI +Y    + + S+ V    
Sbjct: 559 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 618

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD-LEQG 497
              ++     L    V+      A++LY  +     +++   F  VL+ACA   + L  G
Sbjct: 619 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVG 678

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + +H   +K+  D D  +E++++ MY + G + DA++ F  +    L  W+ ++    ++
Sbjct: 679 RKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 738

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ--- 614
               +   +F  M   GV+PD +T ++V+  C   G +R AR+       +HG I +   
Sbjct: 739 CEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS-------VHGQITRKMF 791

Query: 615 ----------LEHYACIVDLL------------------------GRVGLLEGAKMTIDQ 640
                     L  Y+   DLL                         R    E A  +  +
Sbjct: 792 DFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSE 851

Query: 641 M---PIPPDAHIWQSLLSACTIYGNIDLG--LLAGSKLLELQPDNESTYVLLSNLYASAG 695
           M    I P+     S+LS+C + G I  G  +   +   EL P+ ES    L  LYA  G
Sbjct: 852 MLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECG 911

Query: 696 MWND 699
              D
Sbjct: 912 RLGD 915


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 229/760 (30%), Positives = 386/760 (50%), Gaps = 19/760 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L  K G  ++  + T L+  +        A R  ++   R+++++ AL+  L+    
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVS 117
              AL  + R+R + +  +A  F+++V  CGSL E+E+    V    +  G   +V + +
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSL-EDEVAGLQVFSHVIVSGLQRQVSVAN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I      G +  AE  F    + D V++ A+V  Y   G   KS  VF +MR  GL  
Sbjct: 185 SLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLR 244

Query: 178 NEF----SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++     SL +V  +S  V  G  +H   ++ G  S +   + NA++N+Y   G+  DA 
Sbjct: 245 HDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYI--PVVNALVNMYSSAGKLADAE 302

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  ++  D++SW+  I++     + ++A      L   +   +  T  + L +     
Sbjct: 303 FLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG 362

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+ + A   ++     + +GN+LI+MYGKC  + DA  IF  +   D VS N +I 
Sbjct: 363 ALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIG 422

Query: 351 GYS--ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSG 407
            Y+  E+G   +A+ +F  M    +  N  T+ +IL + ++S  L+   + +H++ I +G
Sbjct: 423 SYAVLEDG--TKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAG 480

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           FL DD + + LIT Y KC  L  S  V   I  ++ V  NA+ +  V      E+L+L+ 
Sbjct: 481 FLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFM 540

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +      ++    +  + + A++  LE+G  +H L LK     D  V +A +DMY KCG
Sbjct: 541 DMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCG 600

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            +++  +            WN ++ GYA++G + E    F  M   G  PD +T++ +L+
Sbjct: 601 KMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLS 660

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAGLV +   Y + MS + G+ P ++H  CIVD+LGR+G    A+  I+ MP+ P+ 
Sbjct: 661 ACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPND 720

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW+SLLS+   + N+D+G  A  +LLEL P ++S YVLLSNLYA++  W+DV ++R  M
Sbjct: 721 LIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHM 780

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           K   L K P  SW+        F  GD SH  + +IY +L
Sbjct: 781 KTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKL 820



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 258/552 (46%), Gaps = 18/552 (3%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---- 98
           +R   ++   ISG  R  +   A  +   +R +G+    F  +SLV AC   +E      
Sbjct: 5   HRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGA 64

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
            +H +  K G    VY+ +  +  Y     ++ A+  F +  + + V++TA++     NG
Sbjct: 65  AIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNG 124

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHL 215
             +++   +  MR   +  N  +   V+   G+  D   G Q+    +  G    V   +
Sbjct: 125 HLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVS--V 182

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFND- 271
            N+++++    G+  DA K+F  + E D VSW+  ++  + +G+  ++F +F D+R    
Sbjct: 183 ANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGL 242

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + +  T+ +L+S       +  G  + + C + G    + + NAL++MY   G++ DA 
Sbjct: 243 LRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAE 302

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F  +  +D +SWN+MI+ Y +NG    AL     +L  +  P+  T +S L A S+  
Sbjct: 303 FLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG 362

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L     VH+  ++     +  + + LIT YGKCN++ +++R+   +   + V  N L  
Sbjct: 363 ALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIG 422

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIV--LKACAAMTDLEQ-GKAIHCLALKAR 508
                    +A++++   W    EV  +  +IV  L +  +  DL   G  +H   + A 
Sbjct: 423 SYAVLEDGTKAMQVF--FWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAG 480

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           +  D +V +++I MY KCG +E +   F++I   S+  WNAM+    QHG   E   LF 
Sbjct: 481 FLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFM 540

Query: 569 KMSKFGVKPDEI 580
            M   G   D I
Sbjct: 541 DMRHDGNGLDHI 552



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 243/508 (47%), Gaps = 13/508 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +I +G      ++ +LIS          A +  +  + RD +++NAL+S  +   
Sbjct: 166 QVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEG 225

Query: 61  QSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
               + ++F  +R  G LR DA T  SL+  C S   +     VH +CL+ G  S + +V
Sbjct: 226 LCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVV 285

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y+ +G++  AE  F +    D +++  M+  YV NG    + +   ++      
Sbjct: 286 NALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEG 345

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  + ++ LGA      + +G  +H   +++     +   + N+++ +Y +C    DA 
Sbjct: 346 PDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLL--VGNSLITMYGKCNSIEDAE 403

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F  +   DVVS +  I +     DG +A  +F  +R  + ++N  T++N+L S     
Sbjct: 404 RIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSN 463

Query: 291 ILRA-GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            LR  G  + A+    GF+    + N+LI+MY KCG +  + ++F  +I +  VSWN+MI
Sbjct: 464 DLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMI 523

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A   ++G   ++L +F  M       +   +A  + + ++  SL++ MQ+H   +K G  
Sbjct: 524 AANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLG 583

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  +++  +  YGKC  ++E  ++L +   +     N L S         EA E ++ +
Sbjct: 584 NDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHM 643

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG 497
               R  +  TF  +L AC+    +++G
Sbjct: 644 ISVGRTPDYVTFVTLLSACSHAGLVDKG 671



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 180/391 (46%), Gaps = 15/391 (3%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA-GKQIQAFCYKVGFMEVVSIGNALI 318
           AF + + +R     ++ + + +L+++       RA G  I A   K G M  V IG AL+
Sbjct: 27  AFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALL 86

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            +YG    V DA+ +F  +  ++ VSW +++   S NG   +AL  +  M    +  N  
Sbjct: 87  HLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNAN 146

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
             A+++    + +     +QV SH+I SG     S+ + LI+  G    +++++++   +
Sbjct: 147 AFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRM 206

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGSTFSIVLKACAAMTDLEQG 497
           ++++ V  NAL S+  +    +++  ++  +  G     + +T   ++  CA+   +  G
Sbjct: 207 EERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYG 266

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             +H L L+      I V +A+++MY   G + DA+  F  + R  L  WN M+  Y Q+
Sbjct: 267 SGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQN 326

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE- 616
           G   +      ++      PD +T+ + L +C   G + + R        +H +  QL  
Sbjct: 327 GNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRM-------VHAMTLQLSL 379

Query: 617 HYACIV-----DLLGRVGLLEGAKMTIDQMP 642
           H+  +V      + G+   +E A+     MP
Sbjct: 380 HHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 8/323 (2%)

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSH 402
           SW + I+G    G  + A  M   M E  +  +G+ +AS++ A    +  +     +H+ 
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
             K+G +++  + + L+  YG    + +++R+  E+ ++N V   AL   L       EA
Sbjct: 70  TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEA 129

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L  YR +       N + F+ V+  C ++ D   G  +    + +   + + V +++I M
Sbjct: 130 LGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISM 189

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
               G + DA++ F ++       WNA++  Y+  G   +   +F+ M + G+   + T 
Sbjct: 190 LGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATT 249

Query: 583 LAVLTSCCHAG--LVREARTYLSCM-SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           L  L S C +   +   +  +  C+ + LH  IP +     +V++    G L  A+    
Sbjct: 250 LCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVN---ALVNMYSSAGKLADAEFLFW 306

Query: 640 QMPIPPDAHIWQSLLSACTIYGN 662
            M    D   W +++S+    GN
Sbjct: 307 NMS-RRDLISWNTMISSYVQNGN 328


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 205/677 (30%), Positives = 340/677 (50%), Gaps = 36/677 (5%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG--FIENYAKSGEIVSAEM 134
           D+F  +  ++ C   G  +    VHG  ++ G   R+ L      +  Y K G + SA  
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            F    + + V++  +V  +   G+F+ +  +F  +R  G E+N+F LT +L  +  +  
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 195 GE---QIHGFGVKVGFLSGVCNHLNNA-----IMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                 +H    K+G       H +NA     +++ Y  C    DA  +F+ I   D V 
Sbjct: 178 AGLAGGVHSCAWKLG-------HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVV 230

Query: 247 WSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           W+  ++   +         D   N F+  +   +  +S         A + I     K  
Sbjct: 231 WTAMVSCYSE--------NDCPENAFRCAQSCSLLAISC--------ARQGIHGCAIKTL 274

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
                 +G AL+ MY KCG + DAR  F+ + + D +  + MI+ Y+++    QA ++F 
Sbjct: 275 NDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFL 334

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            ++  S++PN Y+++S+L+A +N   L    Q+H+H IK G   D  + + L+  Y KCN
Sbjct: 335 RLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN 394

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            ++ S ++ S +   N V  N +      +    EAL ++  +  +       T+S VL+
Sbjct: 395 DMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLR 454

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACA+   +     IHC   K+ ++ D  + +++ID Y KCG I DA + F+ +    +  
Sbjct: 455 ACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS 514

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WNA++ GYA HG   +   LF++M+K  V+ ++IT++A+L+ CC  GLV    +    M 
Sbjct: 515 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMR 574

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             HG+ P +EHY CIV LLGR G L  A   I  +P  P A +W++LLS+C I+ N+ LG
Sbjct: 575 IDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALG 634

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
             +  K+LE++P +E+TYVLLSN+YA+AG  + V  LRK M+   + K PG SW+ + G 
Sbjct: 635 RFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGE 694

Query: 727 THHFYAGDSSHSQSKEI 743
            H F  G   H   + I
Sbjct: 695 IHAFSVGSVDHPDMRVI 711



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 178/361 (49%), Gaps = 15/361 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I+   IK  +  +P +   L+  + K  D + A R  F+     D+I  + +IS  A+  
Sbjct: 266 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA-RLAFEMIPYDDVILLSFMISRYAQSN 324

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q+  A +LF RL    + P+ ++ SS+++AC ++ +    + +H   +K+G  S +++ +
Sbjct: 325 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 384

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK  ++ S+   F    D + V++  +V G+  +G  +++  VF EM++  +  
Sbjct: 385 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 444

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            + + ++VL A   +  ++   QIH    K  F +     + N++++ Y +CG   DA+K
Sbjct: 445 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV--IGNSLIDTYAKCGYIRDALK 502

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D++SW+  I+         +A  LF  +  ++ + N+ T + LLS      +
Sbjct: 503 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGL 562

Query: 292 LRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
           +  G  +  +     G    +     ++ + G+ G++NDA + I D      ++ W +++
Sbjct: 563 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 622

Query: 350 A 350
           +
Sbjct: 623 S 623



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 29/304 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  IK GH  D  +   L+  + K  D   + +     ++ + +++N ++ G   F 
Sbjct: 366 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVG---FS 422

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           QSG    AL +F  ++   +     T+SS+++AC    S++    +H    K  F++   
Sbjct: 423 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 482

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ YAK G I  A   F+  ++ D +++ A++ GY  +G+   + E+F  M    
Sbjct: 483 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 542

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGF----------GVKVGFLSGVCNHLNNAIMNLYV 224
           +E N+ +  A+L  S     G   HG           G+K       C      I+ L  
Sbjct: 543 VESNDITFVALL--SVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC------IVRLLG 594

Query: 225 RCGQKLDAVKMFDEI-TEPDVVSWSERIAAACDGVE-AFGLFKDLRFNDFQINEYTMINL 282
           R G+  DA++   +I + P  + W   +++       A G F   +  + +  + T   L
Sbjct: 595 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 654

Query: 283 LSSV 286
           LS++
Sbjct: 655 LSNM 658


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 200/636 (31%), Positives = 332/636 (52%), Gaps = 11/636 (1%)

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           EI  A   F        V +  M+  Y W+G F +S  +++ M  LG+    F+   +L 
Sbjct: 56  EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115

Query: 188 ASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EP 242
           A   ++    G  IH     +G    +  +++ A++++Y +CG    A  +F+ I+  + 
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDL--YVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173

Query: 243 DVVSWSERIAA-ACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQIQ 299
           D+V+W+  IAA +   + A  +    +     +  N  T++++L ++G    L  GK I 
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIH 233

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A+  +  F + V +  AL+ MY KC  +  AR IF+ +  K+ V W++MI GY  +   +
Sbjct: 234 AYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSIS 293

Query: 360 QALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            AL ++  ML  + L P   T+A++L A +    LK+  ++H H+IKSG  LD ++ + L
Sbjct: 294 DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSL 353

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I+ Y KC  ++ +   L E+  K+ V  +A+ S  V      +AL ++R +  S      
Sbjct: 354 ISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYL 413

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   +L AC+ +  L+ G   H   +   +  D  + +A+IDMY KCG I  ++  F +
Sbjct: 414 ETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDR 473

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +    +  WN M++GY  HG   E  +LF ++   G+KPD++T +AVL++C H+GLV E 
Sbjct: 474 MQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEG 533

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           + + S MS    + P++ HY C+VDLL R G L+ A   I +MP  P+  IW +LL+AC 
Sbjct: 534 KYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACR 593

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
            + NI++G     K+  L P+    +VL+SN+Y+S G W+D   +R   +     K PG 
Sbjct: 594 THKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGC 653

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           SW+ + G  H F  G  SH QS  I K+L +L   M
Sbjct: 654 SWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQM 689



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 233/480 (48%), Gaps = 23/480 (4%)

Query: 36  RFLFDTQNR-DIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R +FD   +  ++ +N +I   A    SGP   ++ L+  +   G+ P  FTF  L+KAC
Sbjct: 61  RHVFDQIPKPSVVLWNMMIRTYA---WSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKAC 117

Query: 92  GSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC--LDLDNVA 146
            SLQ      ++H     LG S  +Y+ +  +  YAK G +  A+  F      D D VA
Sbjct: 118 SSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVA 177

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           + AM+  + ++    ++     +M+  G+  N  +L ++L   G +  + +G+ IH + +
Sbjct: 178 WNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYI 237

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC--DGV-EA 260
           +  F   V   L  A++++Y +C     A K+F+ + + + V WS  I      D + +A
Sbjct: 238 RNFFFDNVV--LQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDA 295

Query: 261 FGLFKD-LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
             L+ D L          T+  +L +      L+ GK++     K G     ++GN+LIS
Sbjct: 296 LALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLIS 355

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY KCG +++A    D +I KD+VS++++I+G  +NG+  +AL +F  M    + P   T
Sbjct: 356 MYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLET 415

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           M ++L A S+  +L+     H + +  GF  D S+ + +I  Y KC  +  S+ +   + 
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ 475

Query: 440 KKNAVHINAL-ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            ++ +  N +     ++  C  EAL L++ +     + +  T   VL AC+    + +GK
Sbjct: 476 NRDIISWNTMIIGYGIHGLC-VEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 195/394 (49%), Gaps = 16/394 (4%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDT---QNRDIITYNALISGLARFCQSGPAL 66
           G  +D  +ST L+  + K     +A + LF++   Q+RDI+ +NA+I+  +        +
Sbjct: 137 GLSMDLYVSTALLHMYAKCGHLYQA-QTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTI 195

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
               +++  G+ P++ T  S++   G   +L + + +H   ++  F   V L +  ++ Y
Sbjct: 196 HSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMY 255

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSL 182
           AK   +  A   F      ++V ++AM+ GYV +     +  ++ +M  + GL     +L
Sbjct: 256 AKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATL 315

Query: 183 TAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
             +L A     D+K G+++H   +K G    +   + N+++++Y +CG   +AV   DE+
Sbjct: 316 ATMLRACAQLTDLKRGKKLHCHMIKSGM--DLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373

Query: 240 TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              D VS+S  I+         +A  +F+ ++ +       TMI LL +      L+ G 
Sbjct: 374 IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGT 433

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
               +    GF    SI NA+I MY KCG++  +R IFD +  +D +SWN+MI GY  +G
Sbjct: 434 CCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHG 493

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
              +AL +F  +    L P+  T+ ++L A S+S
Sbjct: 494 LCVEALSLFQELQALGLKPDDVTLIAVLSACSHS 527



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 179/369 (48%), Gaps = 28/369 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFC 60
           I++  I+N    + +L T L+  + K      A R +F+T N+ + + ++A+I G     
Sbjct: 232 IHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYA-RKIFNTVNKKNDVCWSAMIGGYVLHD 290

Query: 61  QSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
               AL L+D  L   GL P   T +++++AC  L   +  + +H   +K G      + 
Sbjct: 291 SISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG 350

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  YAK G + +A     + +  D V+Y+A++ G V NG  +K+  +F +M+S G+ 
Sbjct: 351 NSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA 410

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFL--SGVCNHLNNAIMNLYVRCGQKLD 231
               ++ A+L A      ++ G   HG+ V  GF   + +C    NAI+++Y +CG+   
Sbjct: 411 PYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC----NAIIDMYSKCGKITI 466

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           + ++FD +   D++SW+  I      G  VEA  LF++L+    + ++ T+I +LS+   
Sbjct: 467 SREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH 526

Query: 289 ERILRAGK-----QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
             ++  GK       Q F  K      +     ++ +  + G +++A +    + F  +V
Sbjct: 527 SGLVTEGKYWFSSMSQNFNIKPRMAHYI----CMVDLLARAGNLDEAYTFIQRMPFVPNV 582

Query: 344 S-WNSMIAG 351
             W +++A 
Sbjct: 583 RIWGALLAA 591


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 204/620 (32%), Positives = 333/620 (53%), Gaps = 10/620 (1%)

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--SFDVKE-GEQIH 199
           + + +T+++ GY+ + EF+ +  +  EM   G  LNE + + +L A  S D +  G+Q H
Sbjct: 5   NTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFH 64

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
            F +K GF   V   +  +++ +Y R     DA K+FD +   DV  ++  I   A A +
Sbjct: 65  CFVIKCGFDENVV--VGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGN 122

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
           G +A  +F ++     Q N+YT  N++S+  G+  +  G+Q     +K GF+   SIGNA
Sbjct: 123 GEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNA 182

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           +I+MYGK G   +A  +F  +  ++ +SW ++I+GY+ +G   +A+D F  +    +  +
Sbjct: 183 IINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFD 242

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
              + +IL+  S  ++L+  +Q+H  +IK G+    ++ + L+  Y KC  L  ++ V  
Sbjct: 243 SSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFD 302

Query: 437 EIDKKNAVHINALASVLVYASCHAE--ALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
            +  K     NA+ +  +  S   E   + L+        + +  TFS +L   A  + L
Sbjct: 303 GLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTL 362

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
            +G+  H  A+K  ++ D+ V +AVI MY KCG+IE+A R F  +       WNAM+  Y
Sbjct: 363 GRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAY 422

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG   +V  LF +M K    PDEIT L++L +C ++GL R+  +  + M   +G+ P 
Sbjct: 423 ALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPL 482

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHYAC+VDLLGR G L  A   I++ P      +W++L++ C + G+ + G LA   LL
Sbjct: 483 LEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLL 542

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           EL P    +Y+L+SN+YA   M ++  K+R  M +  L KE G SWI +    HHF A  
Sbjct: 543 ELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWIEIDDKVHHFVASG 602

Query: 735 SSHSQSKEIYKELIKLYEHM 754
             H +S EIY EL  L + M
Sbjct: 603 KDHPESNEIYAELDLLRDDM 622



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 228/449 (50%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q +  +IK G   + ++ T+LI+ +T+   F  A +       +D+  +N +I   AR  
Sbjct: 62  QFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAG 121

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A+++F  +   GL+P+ +TF++++ AC     ++E E   G+  K GF +   + +
Sbjct: 122 NGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGN 181

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G    AE  F    D + +++TA++ GY  +G+  K+ + F+E+   G+  
Sbjct: 182 AIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNF 241

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   LT +L    + +    G QIHG  +K+G+   V  ++  A+++LY +CG  + A  
Sbjct: 242 DSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAV--NIGTALVDLYAKCGNLMSARM 299

Query: 235 MFDEITEPDVVSWSERIAA----ACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +FD ++   + S++  +A     + DG E    LF   R +  + +  T   LLS     
Sbjct: 300 VFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANH 359

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+   A+  K GF   +S+ NA+I+MY KCG + +A  +F+ +   DS+SWN+MI
Sbjct: 360 STLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMI 419

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSGF 408
           + Y+ +G   + L +F  M++    P+  T+ SIL+A + S   +  + + + +  K G 
Sbjct: 420 SAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGI 479

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSE 437
                  +C++   G+   L+E+  ++++
Sbjct: 480 KPLLEHYACMVDLLGRAGHLSEAMDIINK 508



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 15/312 (4%)

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           ++ +++++W S+I GY ++  F  AL++   M +     N +T + IL+A S+       
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q H  +IK GF  +  + + LI  Y +     ++++V   +  K+    N +      A
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +A+ ++  +  +  + N  TF+ ++ AC     +E+G+    L+ K  +  +  + 
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+I+MY K G   +A+R F  +   +L  W A++ GY + G   +  + F ++   GV 
Sbjct: 181 NAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVN 240

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC-------IVDLLGRVG 629
            D      +L  C       E R  L     +HGL+ +L  YAC       +VDL  + G
Sbjct: 241 FDSSLLTTILDGC------SECRN-LELGLQIHGLVIKL-GYACAVNIGTALVDLYAKCG 292

Query: 630 LLEGAKMTIDQM 641
            L  A+M  D +
Sbjct: 293 NLMSARMVFDGL 304


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 226/755 (29%), Positives = 363/755 (48%), Gaps = 90/755 (11%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLG--------------------FSSRVYLVSGFIENY 123
           F+SL+K C S+     +H   +  G                    + S   L +G + +Y
Sbjct: 34  FASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASY 93

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G    A       +    V +  +V  ++  G  D++  V   M   G + + F+L 
Sbjct: 94  LACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLP 153

Query: 184 AVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
             L A  ++   + G   HG     GF S V   + NA++ +Y R G   DA  +FDEIT
Sbjct: 154 YALKACGELPSYRSGSAFHGLICCNGFESNV--FVCNALVAMYSRSGSLEDASLVFDEIT 211

Query: 241 EP---DVVSWSERIAAACDGVE---AFGLFKDLR--FNDFQINE----YTMINLLSSVGG 288
                DV+SW+  +AA   G     A  LF ++    ++   NE     +++N+L +   
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACAS 271

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + L   K+I ++  + G      + NALI  Y KCG + DA ++F+ + FKD VSWN+M
Sbjct: 272 LKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAM 331

Query: 349 -----------------------------------IAGYSENGFFNQALDMFCHMLEFSL 373
                                              IAGY++ G+  +ALD F  M+ +  
Sbjct: 332 VTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGS 391

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI------------SCLITT 421
            PN  T+ S+L A ++  +L Q M+ H++ +K   L  D+              + LI  
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451

Query: 422 YGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALELYRTIWGSCREV--N 477
           Y KC +   ++ + + I +  +N V    +           +AL+L+  +      V  N
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPN 511

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQDI-FVESAVIDMYCKCGTIEDAKRA 535
             T S +L ACA ++ L  GK IH    +   Y+  + FV + +IDMY KCG ++ A+  
Sbjct: 512 AYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNV 571

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  + + +   W +MM GY  HG   E  ++F+KM K G  PD+I++L +L +C H+G+V
Sbjct: 572 FDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMV 631

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            +   Y   M   +G+I   +HYAC++DLL R G L+ A  TI +MP+ P A IW +LLS
Sbjct: 632 DQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLS 691

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++ N++L   A +KL+ ++ +N+ +Y L+SN+YA+A  W DV ++R+ MK+  + K 
Sbjct: 692 ACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKR 751

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           PG SW+     T  F+ GD SH  S EIY  L +L
Sbjct: 752 PGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 144/587 (24%), Positives = 262/587 (44%), Gaps = 87/587 (14%)

Query: 71  RLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           R+   G +PD FT    +KACG L   +     HG+    GF S V++ +  +  Y++SG
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSG 198

Query: 128 EIVSAEMCF----RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--LNE-- 179
            +  A + F    R  +D D +++ ++V  +V       + ++F EM ++  E   NE  
Sbjct: 199 SLEDASLVFDEITRKGID-DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERS 257

Query: 180 --FSLTAVLGASFDVK---EGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDA 232
              S+  +L A   +K   + ++IH + ++ G  +   VC    NA+++ Y +CG   DA
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVC----NALIDTYAKCGSMKDA 313

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLR--------------------- 268
           V +F+ +   DVVSW+  +       +   AF LFK++R                     
Sbjct: 314 VNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQR 373

Query: 269 ------FNDFQ--------INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV---- 310
                  + FQ         N  T+I+LLS+      L  G +  A+  K   + +    
Sbjct: 374 GYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDF 433

Query: 311 --------VSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIAGYSENGFFNQ 360
                   + + NALI MY KC     AR+IF+ +  ++   V+W  MI GY++ G  N 
Sbjct: 434 GGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSND 493

Query: 361 ALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS--MIS 416
           AL +F  M+   +++ PN YT++ IL A ++  SL+   Q+H+++ +          + +
Sbjct: 494 ALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVAN 553

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
           CLI  Y KC  ++ ++ V   + K+N V   ++ S         EAL+++  +  +    
Sbjct: 554 CLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVP 613

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDA 532
           +  +F ++L AC+    ++QG     +    R D  +   +     VID+  + G ++ A
Sbjct: 614 DDISFLVLLYACSHSGMVDQGLDYFDI---MRSDYGVIASAQHYACVIDLLARSGRLDKA 670

Query: 533 KRAFRKICRD-SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
            +  +++  + S A W A++     H          NK+     + D
Sbjct: 671 WKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEND 717



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 29/299 (9%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLARFCQSGPALKLF 69
           D +    +++ +T+   F  AF    + +      D+IT++A+I+G A+      AL  F
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383

Query: 70  DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS------------RVY 114
            ++   G  P++ T  SL+ AC   G+L +    H   LK    S             + 
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLV 443

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDN--VAYTAMVCGYVWNGEFDKSKEVFVEM-- 170
           + +  I+ Y+K     +A   F      +   V +T M+ GY   G+ + + ++F EM  
Sbjct: 444 VHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMIS 503

Query: 171 RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           +   +  N ++++ +L A      ++ G+QIH +  +          + N ++++Y +CG
Sbjct: 504 KPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCG 563

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
               A  +FD + + + VSW+  ++       G EA  +F  ++   F  ++ + + LL
Sbjct: 564 DVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622


>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
 gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 193/556 (34%), Positives = 306/556 (55%), Gaps = 9/556 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +++G  +H   +K    S V   ++N I+NLY +C +  +A ++FDE++E ++VSWS  I
Sbjct: 19  LRQGLPLHAIAIKTATRSDVI--VSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMI 76

Query: 252 AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +      + + A GLF  L   +   NEY   +++S+    + L  GKQI     K G  
Sbjct: 77  SGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLD 133

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
            V  + NALI+MY KCG+ +DA   ++  +  + V++N++I G+ EN   ++  ++   M
Sbjct: 134 SVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMM 193

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            +    P+ +T   +L   ++   LK+   +H   IK        + + +IT Y K N L
Sbjct: 194 YQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLL 253

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKA 487
            E+++    I++K+ +  N   S   + + H +ALE ++ +   CR   +  TF+  L A
Sbjct: 254 EEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAA 313

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C+ +  +  GK IH   ++ R  QD+   +A+I+MY KCG I  A   F K+   +L  W
Sbjct: 314 CSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSW 373

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N M+ G+  HG   +   LF KM   GVKPD +T++ +LT+  HAGLV E   Y + M +
Sbjct: 374 NTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEE 433

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            +G+ P++EH++C++DLLGR G L  AK  + + P   D  +  SLLSAC ++G++D G 
Sbjct: 434 TYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGK 493

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
               +LL+LQP   S YVLLSNLYAS  MW+ V +  K +K   L KEPG+S I V G  
Sbjct: 494 CFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTF 553

Query: 728 HHFYAGDSSHSQSKEI 743
             F   D SHS+ +EI
Sbjct: 554 EKFTVVDFSHSRIEEI 569



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 232/448 (51%), Gaps = 18/448 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++++ IK     D I+S  +++ + K    R A +   +   R++++++A+ISG  +  +
Sbjct: 25  LHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGE 84

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              AL LF +L    + P+ + ++S++ AC SL+   + + +HG  LK G  S  ++ + 
Sbjct: 85  PISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNA 141

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y K G+   A + + + L+L+ VAY A++ G+V N + DK  EV   M   G   +
Sbjct: 142 LITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPD 201

Query: 179 EFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+   +LG   +  D+K GE +H   +K+   S     + N I+ +Y +     +A K 
Sbjct: 202 RFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTA--FIGNLIITMYSKLNLLEEAEKA 259

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGER 290
           F  I E D++SW+  I++     D  +A   FK++  N+ ++  +E+T  + L++  G  
Sbjct: 260 FRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEM-LNECRVRPDEFTFASALAACSGLA 318

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  GKQI     +    + V  GNALI+MY KCG +  A  IF  +  ++ VSWN+MIA
Sbjct: 319 SMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIA 378

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
           G+  +GF  +A ++F  M    + P+  T   +L A +++  + + +   + + ++ G  
Sbjct: 379 GFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGIS 438

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSE 437
            +    SCLI   G+   LNE+K  + +
Sbjct: 439 PEIEHFSCLIDLLGRAGRLNEAKEYMKK 466



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 217/471 (46%), Gaps = 51/471 (10%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +L+      + LR G  + A   K      V + N ++++Y KC ++ +AR +FD +  +
Sbjct: 8   SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER 67

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW++MI+GY + G    AL +F  +   +++PN Y  AS++ A ++ K L Q  Q+H
Sbjct: 68  NLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIH 124

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              +K G      + + LIT Y KC   +++    +E  + N V  NAL +  V      
Sbjct: 125 GQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPD 184

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +  E+ R ++      +  TF  +L  C +  DL++G+ +HC  +K + +   F+ + +I
Sbjct: 185 KGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLII 244

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDE 579
            MY K   +E+A++AFR I    L  WN  +   +    + +    F +M ++  V+PDE
Sbjct: 245 TMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDE 304

Query: 580 ITYLAVLTSCC-----------HAGLVREARTY---------------LSCMSDLHGLIP 613
            T+ + L +C            H  L+R  R Y                 C++  + +  
Sbjct: 305 FTFASALAACSGLASMCNGKQIHGHLIR-TRLYQDVGAGNALINMYAKCGCIAKAYYIFS 363

Query: 614 QLEH-----YACIVDLLGRVGLLEGAK-----MTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           ++EH     +  ++   G  G   G K       +  M + PD+  +  LL+A    G +
Sbjct: 364 KMEHQNLVSWNTMIAGFGNHGF--GGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLV 421

Query: 664 DLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           D GL+  + + E   + P+ E  +  L +L   AG  N+     KE  +KF
Sbjct: 422 DEGLVYFNSMEETYGISPEIEH-FSCLIDLLGRAGRLNEA----KEYMKKF 467



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 225/465 (48%), Gaps = 18/465 (3%)

Query: 86  SLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           SL+  C    +L++   +H + +K    S V + +  +  YAK  ++  A   F +  + 
Sbjct: 8   SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER 67

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIH 199
           + V+++AM+ GY   GE   +  +F +   L +  NE+   +V+ A   +K   +G+QIH
Sbjct: 68  NLVSWSAMISGYEQIGEPISALGLFSK---LNIVPNEYVYASVISACASLKGLVQGKQIH 124

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE 259
           G  +K G  S   + ++NA++ +Y++CG+  DA+  ++E  E + V+++  I    +  +
Sbjct: 125 GQALKFGLDS--VSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182

Query: 260 AFGLFKDLRF---NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
               F+ LR    + F  + +T + LL +      L+ G+ +     K+       IGN 
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNL 242

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-EFSLIP 375
           +I+MY K   + +A   F  +  KD +SWN+ I+  S      +AL+ F  ML E  + P
Sbjct: 243 IITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRP 302

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           + +T AS L A S   S+    Q+H H+I++    D    + LI  Y KC  + ++  + 
Sbjct: 303 DEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIF 362

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           S+++ +N V  N + +         +A EL+  +     + +  TF  +L A      ++
Sbjct: 363 SKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVD 422

Query: 496 QGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRK 538
           +G  ++  +++  Y     +E  S +ID+  + G + +AK   +K
Sbjct: 423 EG-LVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKK 466



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           + S++   S +K+L+Q + +H+  IK+    D  + + ++  Y KC  L E+++V  E+ 
Sbjct: 6   VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           ++N V  +A+ S          AL L+  +     E     ++ V+ ACA++  L QGK 
Sbjct: 66  ERNLVSWSAMISGYEQIGEPISALGLFSKLNIVPNEY---VYASVISACASLKGLVQGKQ 122

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH  ALK   D   FV +A+I MY KCG   DA  A+ +    +   +NA++ G+ ++  
Sbjct: 123 IHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             +   +   M + G  PD  T++ +L +C     ++     L C +    L        
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGE-LLHCQTIKLKLNSTAFIGN 241

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL---EL 676
            I+ +  ++ LLE A+     +    D   W + +S+C+   + +  L A  ++L    +
Sbjct: 242 LIITMYSKLNLLEEAEKAFRSIE-EKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRV 300

Query: 677 QPDNESTYVLLSNLYASAGM 696
           +PD    +   S L A +G+
Sbjct: 301 RPDE---FTFASALAACSGL 317



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 48/90 (53%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  LI+   + D      LI+ + K     +A+      ++++++++N +I+G     
Sbjct: 325 QIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHG 384

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
             G A +LF +++  G++PD+ TF  L+ A
Sbjct: 385 FGGKAFELFAKMKTMGVKPDSVTFVGLLTA 414


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 207/670 (30%), Positives = 338/670 (50%), Gaps = 27/670 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L E + +HG  +K   +    +    +E+Y+ +  I                 ++ ++ 
Sbjct: 55  NLNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAI-----------------HSFLIT 97

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLS 209
            Y+ N     + +++  MR    E++ F + +VL A   +     G+++HGF VK GF  
Sbjct: 98  SYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHG 157

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKD 266
            V   + NA++ +Y   G    A  +FD+I   DVVSWS  I +    G+  EA  L +D
Sbjct: 158 DV--FVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRD 215

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF--MEVVSIGNALISMYGKC 324
           +     + +E  MI++   +     L+ GK + A+  + G      V +  ALI MY KC
Sbjct: 216 MHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKC 275

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             +  AR +FD L     +SW +MIA Y      N+ + +F  ML   + PN  TM S++
Sbjct: 276 ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLV 335

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +    + +L+    +H+  +++GF L   + +  I  YGKC  +  ++ V      K+ +
Sbjct: 336 KECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLM 395

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             +A+ S     +C  EA +++  + G     N  T   +L  CA    LE GK IH   
Sbjct: 396 MWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
            K     D+ ++++ +DMY  CG I+ A R F +     ++ WNAM+ G+A HG      
Sbjct: 456 DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAAL 515

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF +M   GV P++IT++  L +C H+GL++E +     M    G  P++EHY C+VDL
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDL 575

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR GLL+ A   I  MP+ P+  ++ S L+AC ++ NI LG  A  + L L+P      
Sbjct: 576 LGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYN 635

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VL+SN+YASA  W DV  +R+ MK++ + KEPG S I V G  H F  GD  H  +K++Y
Sbjct: 636 VLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVY 695

Query: 745 KELIKLYEHM 754
           + + ++ E +
Sbjct: 696 EMIDEMREKL 705



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 210/459 (45%), Gaps = 16/459 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +++  ++KNG H D  +   LI  +++      A R LFD  +N+D+++++ +I    R 
Sbjct: 145 EVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALA-RLLFDKIENKDVVSWSTMIRSYDRS 203

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF--SSRVY 114
                AL L   +    ++P      S+      L +    + +H   ++ G    S V 
Sbjct: 204 GLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVP 263

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  I+ Y K   +  A   F        +++TAM+  Y+     ++   +FV+M   G
Sbjct: 264 LCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEG 323

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  NE ++ +++   G +  ++ G+ +H F ++ GF   +   L  A +++Y +CG    
Sbjct: 324 MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLV--LATAFIDMYGKCGDVRS 381

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD     D++ WS  I++        EAF +F  +     + NE TM++LL     
Sbjct: 382 ARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAK 441

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK I ++  K G    + +  + + MY  CG ++ A  +F     +D   WN+M
Sbjct: 442 AGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAM 501

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSG 407
           I+G++ +G    AL++F  M    + PN  T    L A S+S  L++  ++ H  + + G
Sbjct: 502 ISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFG 561

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           F        C++   G+   L+E+  ++  +  +  + +
Sbjct: 562 FTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAV 600


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 185/541 (34%), Positives = 299/541 (55%), Gaps = 5/541 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND 271
           +N A++N Y +CG   DA K+FD +    V +W+  I+A   +    EAF +F+ ++   
Sbjct: 47  VNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEG 106

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + +  T +++L +      L+ GK ++    +  F   + +G ALI+MY +C    +A 
Sbjct: 107 ERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAA 166

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F  +  K+ ++W+++I  ++++G   +AL  F  M +  ++PN  T  S+L   +   
Sbjct: 167 QVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS 226

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA--LNESKRVLSEIDKKNAVHINAL 449
            L++  ++H  I + G     +M + L+  YG+C    L+ ++ +L E+D++     N L
Sbjct: 227 GLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVL 286

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +         EALE Y+ +      V+  TF  VL AC + T L +GK IH  A++   
Sbjct: 287 INGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGL 346

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D D+ V++A+ +MY KCG++E+A+R F  +   S   WN M+  YAQHG   EV  L  K
Sbjct: 347 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 406

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M + GVK + IT+++VL+SC HAGL+ E   Y   +    G+  + EHY C+VDLLGR G
Sbjct: 407 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAG 466

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L+ A+  I +MP  P+   W SLL AC ++ ++D G LA  KLLEL P N S  V+LSN
Sbjct: 467 KLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSN 526

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +Y+  G W +  KLR+ M  + + K PG S I V    H F   D+SH ++ EIY ++ +
Sbjct: 527 IYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEE 586

Query: 750 L 750
           L
Sbjct: 587 L 587



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 217/455 (47%), Gaps = 14/455 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S + ++ H LD  ++T L++ +TK      A +       R + T+N++IS  +   +
Sbjct: 32  IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 91

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           SG A  +F R++++G R D  TF S++ AC    +LQ  + V     +  F   +++ + 
Sbjct: 92  SGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTA 151

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  YA+     +A   F      + + ++A++  +  +G   ++   F  M+  G+  N
Sbjct: 152 LITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPN 211

Query: 179 EFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ-KLDAVK 234
             +  ++L        ++E  +IH    + G        ++NA++N+Y RC   +LD  +
Sbjct: 212 RVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTT--MSNALVNVYGRCETGELDVAE 269

Query: 235 -MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +  E+ E  + +W+  I          EA   ++ L+     +++ T I++L++     
Sbjct: 270 VILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSST 329

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK I +   + G    V + NAL +MY KCG + +AR IFD +  + +VSWN M+ 
Sbjct: 330 SLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQ 389

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFL 409
            Y+++G   + L +   M +  +  NG T  S+L + S++  + +  Q  HS     G  
Sbjct: 390 AYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 449

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +      CL+   G+   L E+++ +S++  +  +
Sbjct: 450 VKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEI 484



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/497 (21%), Positives = 235/497 (47%), Gaps = 29/497 (5%)

Query: 75  QGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +G++ +  TF +++ +     +L++ + +H    +   S  V++ +  +  Y K G +  
Sbjct: 4   EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63

Query: 132 AEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
           A   F D +   +V  + +M+  Y  +    ++  +F  M+  G   +  +  ++L A  
Sbjct: 64  ARKVF-DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACV 122

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLN----NAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           + +  +  HG  V+   +S     L+     A++ +Y RC    +A ++F  + + ++++
Sbjct: 123 NPENLQ--HGKHVRES-ISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179

Query: 247 WSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  I A  D     EA   F+ ++      N  T I+LL+       L    +I     
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239

Query: 304 KVGFMEVVSIGNALISMYGKC--GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
           + G  +  ++ NAL+++YG+C  G+++ A  I   +  +   +WN +I GY+ +G   +A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 362 LDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           L+ +   L+   IP +  T  S+L A ++S SL +   +HS+ ++ G   D  + + L  
Sbjct: 300 LETY-QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y KC ++  ++R+   +  ++AV  N +           E L+L R +     ++NG T
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGIT 418

Query: 481 FSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRA 535
           F  VL +C+    + +G +  H L     +D+ I V++     ++D+  + G +++A++ 
Sbjct: 419 FVSVLSSCSHAGLIAEGCQYFHSLG----HDRGIEVKTEHYGCLVDLLGRAGKLQEAEKY 474

Query: 536 FRKICRDS-LAGWNAMM 551
             K+  +  +  W +++
Sbjct: 475 ISKMPSEPEIVTWASLL 491



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 164/331 (49%), Gaps = 7/331 (2%)

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   +  N  T  ++L +V +  +L++   +HS + +S   LD  + + L+ TY KC +
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L ++++V   +  ++    N++ S    +    EA  +++ +       +  TF  +L A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C    +L+ GK +     +  ++ D+FV +A+I MY +C + E+A + F ++ + +L  W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS-CCHAGLVREARTYLSCMS 606
           +A++  +A HG   E    F  M + G+ P+ +T++++L      +GL   +R +L  + 
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL--LI 238

Query: 607 DLHGLIPQLEHYACIVDLLGR--VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
             HGL         +V++ GR   G L+ A++ + +M        W  L++  T++G   
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWNVLINGYTLHGRSR 297

Query: 665 LGLLAGSKL-LELQPDNESTYVLLSNLYASA 694
             L    +L LE  P ++ T++ + N   S+
Sbjct: 298 EALETYQRLQLEAIPVDKVTFISVLNACTSS 328


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 225/728 (30%), Positives = 360/728 (49%), Gaps = 66/728 (9%)

Query: 85  SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
              +  C ++ + +++H   L  G  + + L S  I  Y   G +  A    R     D 
Sbjct: 32  PPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDA 90

Query: 145 VAY--TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIH 199
             Y   +++  Y  NG  +K   +F  M SL    + ++   V  A  +   V+ GE  H
Sbjct: 91  GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACD 256
              +  GF+S V   + NA++ +Y RC    DA K+FDE++  DVVSW+   E  A    
Sbjct: 151 ALSLVTGFISNV--FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208

Query: 257 GVEAFGLFKDLRFNDF--QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
              A  +F  +  N+F  + +  T++N+L           GKQ+  F      ++ + +G
Sbjct: 209 PKVALEMFSRMT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF--------- 365
           N L+ MY KCG +++A ++F  +  KD VSWN+M+AGYS+ G F  A+ +F         
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327

Query: 366 -------------------------C-HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
                                    C  ML   + PN  T+ S+L   ++  +L    ++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387

Query: 400 HSHIIK-------SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           H + IK       +G   ++ +I+ LI  Y KC  ++ ++ +   +  K    +     +
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447

Query: 453 LVYASCHAEA---LELYRTIWGS-CR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
             Y+  H +A   LEL   ++   C+   N  T S  L ACA++  L  GK IH  AL+ 
Sbjct: 448 GGYSQ-HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506

Query: 508 RYDQ-DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
           + +   +FV + +IDMY KCG+I DA+  F  +   +   W ++M GY  HG   E   +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F++M + G K D +T L VL +C H+G++ +   Y + M  + G+ P  EHYAC+VDLLG
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R G L  A   I++MP+ P   +W + LS C I+G ++LG  A  K+ EL  +++ +Y L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           LSNLYA+AG W DV ++R  M+ K + K PG SW+     T  F+ GD +H  +KEIY+ 
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746

Query: 747 LIKLYEHM 754
           L+   +HM
Sbjct: 747 LL---DHM 751



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 245/540 (45%), Gaps = 61/540 (11%)

Query: 17  LSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           L++ LIS +        A   L  F   +  +  +N+LI        +   L LF  +  
Sbjct: 61  LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120

Query: 75  QGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
               PD +TF  + KACG   S++  E  H + L  GF S V++ +  +  Y++   +  
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-LGLELNEFSLTAVLG--A 188
           A   F +    D V++ +++  Y   G+   + E+F  M +  G   +  +L  VL   A
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 189 SFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK------------------ 229
           S      G+Q+H F V    +  +   + N ++++Y +CG                    
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNM--FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298

Query: 230 -------------LDAVKMFDEITEP----DVVSWSERIAAACD---GVEAFGLFKDLRF 269
                         DAV++F+++ E     DVV+WS  I+       G EA G+ + +  
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-------GFMEVVSIGNALISMYG 322
           +  + NE T+I++LS       L  GK+I  +  K        G  +   + N LI MY 
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418

Query: 323 KCGQVNDARSIFDYLIFK--DSVSWNSMIAGYSENGFFNQALDMFCHMLE--FSLIPNGY 378
           KC +V+ AR++FD L  K  D V+W  MI GYS++G  N+AL++   M E      PN +
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKRVLSE 437
           T++  L A ++  +L+   Q+H++ +++        +S CLI  Y KC ++++++ V   
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  KN V   +L +         EAL ++  +     +++G T  +VL AC+    ++QG
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 224/492 (45%), Gaps = 56/492 (11%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           ++L +  G   +  +   L++ +++      A +   +    D++++N++I   A+  + 
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209

Query: 63  GPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
             AL++F R+  + G RPD  T  +++  C SL  + +   +H   +       +++ + 
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR------- 171
            ++ YAK G +  A   F +    D V++ AMV GY   G F+ +  +F +M+       
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329

Query: 172 ----------------------------SLGLELNEFSLTAVLGASFDVK---EGEQIHG 200
                                       S G++ NE +L +VL     V     G++IH 
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389

Query: 201 FGVKVGF-----LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EPDVVSWSERIAA 253
           + +K          G  N + N ++++Y +C +   A  MFD ++  E DVV+W+  I  
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449

Query: 254 AC---DGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                D  +A  L  ++   D Q   N +T+   L +      LR GKQI A+  +    
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509

Query: 309 EV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
            V + + N LI MY KCG ++DAR +FD ++ K+ V+W S++ GY  +G+  +AL +F  
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCN 426
           M       +G T+  +L A S+S  + Q M+  + +    G        +CL+   G+  
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629

Query: 427 ALNESKRVLSEI 438
            LN + R++ E+
Sbjct: 630 RLNAALRLIEEM 641



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 173/367 (47%), Gaps = 35/367 (9%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLARFCQSGPALKLF 69
           D +    +++ +++   F  A R     Q      D++T++A ISG A+      AL + 
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353

Query: 70  DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL-------GFSSRVYLVSGF 119
            ++   G++P+  T  S++  C   G+L   + +H   +K        G      +++  
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413

Query: 120 IENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLG 174
           I+ YAK  ++ +A   F D L   + D V +T M+ GY  +G+ +K+ E+  EM      
Sbjct: 414 IDMYAKCKKVDTARAMF-DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              N F+++  L A      ++ G+QIH + ++    + V   ++N ++++Y +CG   D
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAKCGSISD 531

Query: 232 AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD +   + V+W+  +        G EA G+F ++R   F+++  T++ +L +   
Sbjct: 532 ARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH 591

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGN----ALISMYGKCGQVNDA-RSIFDYLIFKDSV 343
             ++  G +   +  ++  +  VS G      L+ + G+ G++N A R I +  +    V
Sbjct: 592 SGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648

Query: 344 SWNSMIA 350
            W + ++
Sbjct: 649 VWVAFLS 655


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 303/578 (52%), Gaps = 42/578 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AAC----DGVEAFGLFKDLRFN 270
           N I++ Y + G+  +   +FD +   D VSW+  I+  A C      V+A+ L   +  N
Sbjct: 79  NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL---MLKN 135

Query: 271 D--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
           D  F +N  T   LL        ++ G+QI     K GFM  V +G+ L+ MY K G ++
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195

Query: 329 DARSIFDYLIFK-------------------------------DSVSWNSMIAGYSENGF 357
            AR +FD L  K                               DS+SW SMI G+++NG 
Sbjct: 196 CARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGL 255

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
              A+D+F  M   +L  + YT  S+L A     +L++  QVH++II++ +  +  + S 
Sbjct: 256 DRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASA 315

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L+  Y KC  +  ++ V  ++  KN V   A+           EA++ +  +     E +
Sbjct: 316 LVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPD 375

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T   V+ +CA +  LE+G   H  AL +     I V +A++ +Y KCG+IED+ R F 
Sbjct: 376 DFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFN 435

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +I       W A++ GYAQ G  +E   LF  M   G+KPD++T++ VL++C  AGLV +
Sbjct: 436 EISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEK 495

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
                  M + HG++P  +HY C++DL  R G +E A+  I++MP  PDA  W +LLS+C
Sbjct: 496 GNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSC 555

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
             YGN+D+G  A   L+EL P N ++YVLLS++YA+ G W +V +LRK+M++K L KEPG
Sbjct: 556 RFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPG 615

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            SWI      H F A D S+  S +IY EL KL   M+
Sbjct: 616 CSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMI 653



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 256/552 (46%), Gaps = 79/552 (14%)

Query: 79  PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           P+ F  ++L+ +   L        V  ++   + +Y  +  +  Y+K G +   E  F  
Sbjct: 42  PETFLLNNLISSYAKLGSIPYACKVFDQMPHPN-LYSWNTILSAYSKLGRVSEMEYLFDA 100

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR----SLGLELNEFSLTAVLGASFD-VK 193
               D V++ +++ GY   G   +S + +  M     S  L    FS   +L +    VK
Sbjct: 101 MPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVK 160

Query: 194 EGEQIHGFGVKVGFLSGV-----------------CNH-------------LNNAIMNLY 223
            G QIHG  VK GF+S V                 C                N  IM L 
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGL- 219

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMI 280
           +RCG+  D+ ++F E+ E D +SW+  I     +G+  +A  +F++++  + Q+++YT  
Sbjct: 220 MRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFG 279

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++L++ GG   L+ GKQ+ A+  +  + + + + +AL+ MY KC  +  A ++F  +  K
Sbjct: 280 SVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCK 339

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW +M+ GY +NG+  +A+  F  M ++ + P+ +T+ S++ + +N  SL++  Q H
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  + SG +   ++ + L+T YGKC ++ +S R+ +EI  K+ V   AL S         
Sbjct: 400 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 459

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR---YDQDIFVES 517
           E + L+ ++     + +  TF  VL AC+    +E+G  I    +        QD +  +
Sbjct: 460 ETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHY--T 517

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            +ID++ + G IE+A+                               N  NKM      P
Sbjct: 518 CMIDLFSRAGRIEEAR-------------------------------NFINKMP---FSP 543

Query: 578 DEITYLAVLTSC 589
           D I++  +L+SC
Sbjct: 544 DAISWATLLSSC 555



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 229/466 (49%), Gaps = 51/466 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLA---RFCQSGPALKLFDRLRY 74
            T++S ++K         +LFD    RD +++N+LISG A      QS  A  L   L+ 
Sbjct: 79  NTILSAYSKLGRVSE-MEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM--LKN 135

Query: 75  QG-LRPDAFTFSSLV---KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            G    +  TFS+L+      G ++    +HG  +K GF S V++ S  ++ Y+K G I 
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195

Query: 131 SAEMCFRDC-------------------------------LDLDNVAYTAMVCGYVWNGE 159
            A   F +                                 + D++++T+M+ G+  NG 
Sbjct: 196 CARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGL 255

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
              + ++F EM+   L++++++  +VL   G    ++EG+Q+H + ++  +   +   + 
Sbjct: 256 DRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI--FVA 313

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           +A++++Y +C     A  +F ++T  +VVSW+  +          EA   F D++    +
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +++T+ +++SS      L  G Q  A     G +  +++ NAL+++YGKCG + D+  +
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ + FKD V+W ++++GY++ G  N+ + +F  ML   L P+  T   +L A S +  +
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLV 493

Query: 394 KQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           ++  Q+  S I + G +      +C+I  + +   + E++  ++++
Sbjct: 494 EKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 539



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 187/346 (54%), Gaps = 13/346 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  TLI    +      + R  F+ + RD I++ ++I+G  +      A+ +F  ++ +
Sbjct: 210 VMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLE 269

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            L+ D +TF S++ ACG   +LQE + VH   ++  +   +++ S  ++ Y K   I SA
Sbjct: 270 NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSA 329

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
           E  F+     + V++TAM+ GY  NG  +++ + F +M+  G+E ++F+L +V+ +  + 
Sbjct: 330 EAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANL 389

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++EG Q H   +  G +S +   ++NA++ LY +CG   D+ ++F+EI+  D V+W+ 
Sbjct: 390 ASLEEGAQFHARALTSGLISFIT--VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTA 447

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKV 305
            ++         E  GLF+ +  +  + ++ T I +LS+     ++  G QI ++   + 
Sbjct: 448 LVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEH 507

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIA 350
           G + +      +I ++ + G++ +AR+  + + F  D++SW ++++
Sbjct: 508 GIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 127/260 (48%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I+  +  +  +++ L+  + K  + + A         ++++++ A++ G  +  
Sbjct: 296 QVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 355

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A+K F  ++  G+ PD FT  S++ +C    SL+E    H   L  G  S + + +
Sbjct: 356 YSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSN 415

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G I  +   F +    D V +TA+V GY   G+ +++  +F  M + GL+ 
Sbjct: 416 ALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKP 475

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   VL A      V++G QI    +    +  + +H    +++L+ R G+  +A  
Sbjct: 476 DKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHY-TCMIDLFSRAGRIEEARN 534

Query: 235 MFDEIT-EPDVVSWSERIAA 253
             +++   PD +SW+  +++
Sbjct: 535 FINKMPFSPDAISWATLLSS 554



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 49/263 (18%), Positives = 110/263 (41%), Gaps = 48/263 (18%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +LK C    +  + K +H   +K     + F+ + +I  Y K G+I  A + F ++   +
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA----- 598
           L  WN ++  Y++ G   E+  LF+ M     + D +++ ++++     GL+ ++     
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMP----RRDGVSWNSLISGYAGCGLIYQSVKAYN 130

Query: 599 ------------RTYLSCM-------------SDLHGLIPQLEHYACI------VDLLGR 627
                       R   S +               +HG + +    + +      VD+  +
Sbjct: 131 LMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSK 190

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL--ELQPDNESTYV 685
           +G++  A+   D++P   +  ++ +L     I G +  G +  SK L  E++  +  ++ 
Sbjct: 191 MGMISCARKVFDELP-EKNVVMYNTL-----IMGLMRCGRVEDSKRLFFEMRERDSISWT 244

Query: 686 LLSNLYASAGMWNDVGKLRKEMK 708
            +   +   G+  D   + +EMK
Sbjct: 245 SMITGFTQNGLDRDAIDIFREMK 267


>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
 gi|194688792|gb|ACF78480.1| unknown [Zea mays]
          Length = 706

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 206/713 (28%), Positives = 359/713 (50%), Gaps = 62/713 (8%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEI 99
           +R+ +++N +I+ +AR    G AL+++  +  +GL P  FT +S++ ACG+   L +   
Sbjct: 3   DRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRR 62

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
            HG+ +K+G     ++ +G +  Y K G +  A   F      + V++TAM+ G    G 
Sbjct: 63  CHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGA 122

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA-----------SFDVKEGEQIHGFGVKVGFL 208
            D +  +F  M   G+ ++  ++++VLGA           +  ++  + IH   V+ GF 
Sbjct: 123 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGF- 181

Query: 209 SGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIAA----ACDGVEAFGL 263
            G   H+ N++++LY + G K+D A+K+F+ ++   +VSW+  I       C    A  +
Sbjct: 182 -GSDQHVGNSLVDLYAK-GMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCY-ERAMEV 238

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
            + ++ + F+ NE T  N+L+S                C K                   
Sbjct: 239 LEFMQESGFEPNEVTYSNMLAS----------------CIK------------------- 263

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
              V  AR++FD +      +WN++++GY +     + +D+F  M   ++ P+  T+A I
Sbjct: 264 ARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVI 323

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKK 441
           L + S   + +   QVHS  ++   LL + M   S LI  Y KC  +  +  + + + ++
Sbjct: 324 LSSCSRLGNFELGKQVHSASVR--LLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER 381

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           + V  N++ S L   S   EA +  + +  +      S+++ ++  CA ++ + QG+ +H
Sbjct: 382 DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMH 441

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
              LK  YDQ+++V  ++IDMY K G ++DA+  F  +   +L  WN M+ GYAQ+G   
Sbjct: 442 AQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGE 501

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           +   LF  M     KPD +T++AVLT C H+GLV EA T+ + M   +G+ P +EHY C+
Sbjct: 502 KAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCL 561

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           +D L R       +  I +MP   D  +W+ LL+AC ++ N +LG  +   L  L P N 
Sbjct: 562 IDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNP 621

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           S YVLLSN+YA+ G   D   +R  M  + + K  GYSW++    +  F   D
Sbjct: 622 SPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVAD 674



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/501 (22%), Positives = 219/501 (43%), Gaps = 48/501 (9%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L +K G      +   L+  +TK      A R      + + +++ A++ GLA+    
Sbjct: 64  HGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAV 123

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG-----------SLQENEIVHGVCLKLGFSS 111
             AL+LF R+   G+R D    SS++ AC            ++Q  + +H + ++ GF S
Sbjct: 124 DDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGS 183

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
             ++ +  ++ YAK  ++  A   F     +  V++  ++ GY   G ++++ EV   M+
Sbjct: 184 DQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQ 243

Query: 172 SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             G E NE + + +L +    ++                                     
Sbjct: 244 ESGFEPNEVTYSNMLASCIKARDVPS---------------------------------- 269

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  MFD+I +P V +W+  ++         E   LF+ ++  + Q +  T+  +LSS   
Sbjct: 270 ARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSR 329

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                 GKQ+ +   ++     + + + LI +Y KCGQV  A  IF+ +  +D V WNSM
Sbjct: 330 LGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSM 389

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+G + +    +A D    M E  + P   + AS++   +   S+ Q  Q+H+ ++K G+
Sbjct: 390 ISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGY 449

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  +   LI  Y K   +++++   + +  KN V  N +           +A+EL+  
Sbjct: 450 DQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEY 509

Query: 469 IWGSCREVNGSTFSIVLKACA 489
           +  + ++ +  TF  VL  C+
Sbjct: 510 MLTTKQKPDSVTFIAVLTGCS 530



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 165/362 (45%), Gaps = 15/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++   + ++G   + +  + +++   K  D   A R +FD      + T+N L+SG  + 
Sbjct: 237 EVLEFMQESGFEPNEVTYSNMLASCIKARDVPSA-RAMFDKIPKPSVTTWNTLLSGYGQE 295

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                 + LF R+++Q ++PD  T + ++ +C  L   E+   VH   ++L   + +++ 
Sbjct: 296 ELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVA 355

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           SG I+ Y+K G++  A + F    + D V + +M+ G   +   +++ +   +MR  G+ 
Sbjct: 356 SGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMF 415

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             E S  +++        + +G Q+H   +K G+   V  ++  +++++Y + G   DA 
Sbjct: 416 PTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNV--YVGCSLIDMYAKSGNMDDAR 473

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             F+ +   ++V+W+E I        G +A  LF+ +     + +  T I +L+      
Sbjct: 474 LFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSG 533

Query: 291 IL-RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++  A     +     G   +V     LI    +  +  +  ++   + +K D + W  +
Sbjct: 534 LVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVL 593

Query: 349 IA 350
           +A
Sbjct: 594 LA 595


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 228/775 (29%), Positives = 396/775 (51%), Gaps = 29/775 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S ++ +G   + I+S +L++ + K  D   A +       RD++++ A+   LA + 
Sbjct: 79  QIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAM---LAVYA 135

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
           Q+G    AL+   R+  +G++P+  TF ++V  C  L+  ++   +H   +  G      
Sbjct: 136 QNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGI 195

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  +  Y   G     +  F        + +T M+ G   NG++++   VF +M   G
Sbjct: 196 LGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEG 255

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ NE +  +++    +   VKEGE I    ++  F S     L  ++++LY +CG    
Sbjct: 256 VKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL--LATSLISLYGQCGILDR 313

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  + + + + DVV+W+  + A     D  EA  L + +    F  N+ T +++L +   
Sbjct: 314 AKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACAN 373

Query: 289 ERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
              L  G++I A     G ++  V++GN++I+MYGKCGQ   A S+F+ +  KD VSWN+
Sbjct: 374 LEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNA 433

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I     N  F  AL++F  M    L  N +T+ S+LEA    + LK A Q+H+     G
Sbjct: 434 VINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGG 493

Query: 408 FLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH----AEA 462
           F  + + + + ++  Y +C +L ++K+    +++K  V  + +  +  YA         A
Sbjct: 494 FGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSII--LAAYAQSKDGPGRRA 551

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVID 521
            + ++ +     +    TF   L ACAAM  LE G+++H  A  + + +  + + + +I+
Sbjct: 552 FKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIIN 611

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY KCG+  DAK  F ++    L  WN++++ YA +G   E  +   +M   G  PD  T
Sbjct: 612 MYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGT 671

Query: 582 YLAVLTSCCHAGLV-REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
            +++L    HAGL+ R    + S + D HGL P      C+VDLL R G L+ A+  I  
Sbjct: 672 SVSILYGLSHAGLLERGVEHFRSSIQD-HGLEPSSGQLKCLVDLLARKGFLDAAEELILA 730

Query: 641 MPI-PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            P    D   W +LL+AC  YG+   G+    ++ EL+P +  ++V+L+NLYAS G W+D
Sbjct: 731 SPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSD 790

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             ++RK M+   + KEPG SWI + G  H F +G+S H + +EI ++L KL   M
Sbjct: 791 ASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRM 845



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 176/683 (25%), Positives = 322/683 (47%), Gaps = 31/683 (4%)

Query: 56  LARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF 109
           +A + Q+G    AL+LF R++++G RPD   F   + AC   G L     +H   +  G 
Sbjct: 30  MAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGL 89

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           +S + + +  +  Y K  ++  AE  F   L  D V++TAM+  Y  NG + ++ E    
Sbjct: 90  TSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSR 149

Query: 170 MRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGF-LSGVCNHLNNAIMNLYVR 225
           M + G++ N+ +   ++     ++    G +IH   +  G    G+   L NA++++Y  
Sbjct: 150 MDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGI---LGNALVHMYGS 206

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
           CG   D   +F  + +  V+ W+  IA         E   +F+ +     + NE T +++
Sbjct: 207 CGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSM 266

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +        ++ G+ I A   +  F     +  +LIS+YG+CG ++ A+ + +++  +D 
Sbjct: 267 VEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDV 326

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           V+WN+M+   ++NG   +A+ +   M       N  T  S+LEA +N ++L Q  ++H+ 
Sbjct: 327 VAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHAR 386

Query: 403 IIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           ++  G L  +  + + +IT YGKC     +  V   + +K+ V  NA+ +  V  S   +
Sbjct: 387 VLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQD 446

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD-IFVESAVI 520
           ALEL+  +       N  T   +L+AC  + DL+  + IH  A    +  +   V ++V+
Sbjct: 447 ALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVV 506

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH--GCYHEVSNLFNKMSKFGVKPD 578
           +MY +CG++ DAK+AF  +    L  W+ ++  YAQ   G        F +M   G+KP 
Sbjct: 507 NMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPG 566

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           E+T+++ L +C     +   R+     +    +   L     I+++ G+ G    AK+  
Sbjct: 567 EVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVF 626

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL-----QPDNESTYVLLSNLYAS 693
           DQMP       W SL+ A   Y +    L A S L E+      PD+ ++  +L  L  +
Sbjct: 627 DQMP-EKCLISWNSLIVA---YAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHA 682

Query: 694 AGMWNDVGKLRKEMKEKFLCKEP 716
             +   V   R  +++  L  EP
Sbjct: 683 GLLERGVEHFRSSIQDHGL--EP 703



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 233/475 (49%), Gaps = 11/475 (2%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
           Y K   +  A M F D +   NV ++T M+  Y  NG + ++ E+F  M+  G   ++  
Sbjct: 2   YGKCARVTDALMVF-DGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
               L    AS ++  G QIH   V  G  S +   ++N+++N+Y +C     A K+FD 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNII--ISNSLVNMYGKCQDVPCAEKVFDG 118

Query: 239 ITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   DVVSW+  +A  A +G   +A      +     + N+ T + ++      R+L  G
Sbjct: 119 MLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLG 178

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           ++I       G      +GNAL+ MYG CG  +D +S+F  +     + W +MIAG S+N
Sbjct: 179 RKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQN 238

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G + + L +F  M    +  N  T  S++E   N  ++K+   + + I++S F     + 
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + LI+ YG+C  L+ +K +L  + +++ V  NA+ +       + EA+ L R +      
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHC-LALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
            N  T+  VL+ACA +  L QG+ IH  + L     +++ V ++VI MY KCG  E A  
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            F  + R     WNA++     +  + +   LF+ M   G++ +E T L++L +C
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 234/483 (48%), Gaps = 15/483 (3%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYT 278
           +Y +C +  DA+ +FD I+  +V SW+  +AA        EA  LF  +++   + ++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
            +  L +      L  G+QI +     G    + I N+L++MYGKC  V  A  +FD ++
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D VSW +M+A Y++NG ++QAL+    M    + PN  T  +I++  +  + L    +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H  II  G   D  + + L+  YG C + ++ K V S + + + +    + +       
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
           + E L ++R +     + N  T+  +++ C  +  +++G+ I    L++ +     + ++
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +I +Y +CG ++ AK     + +  +  WNAM+   AQ+G   E  +L  +M   G   +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP-QLEHYACIVDLLGRVGLLEGAKMT 637
           ++TYL+VL +C +   + + R  +     L GL+  ++     ++ + G+ G  E A   
Sbjct: 361 KVTYLSVLEACANLEALSQGRE-IHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNID----LGLLAGSKLLELQPDNESTYVLLSNLYAS 693
            + MP   D   W ++++A    GN      L L  G   +EL+    + + LLS L A 
Sbjct: 420 FEAMPRKDDVS-WNAVINASV--GNSKFQDALELFHG---MELEGLRSNEFTLLSLLEAC 473

Query: 694 AGM 696
            G+
Sbjct: 474 GGL 476


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 200/731 (27%), Positives = 372/731 (50%), Gaps = 15/731 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ LI   +     L+ TL+S ++K ++F  A +      NR+++T+  LIS   ++ 
Sbjct: 69  QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A ++F+ +R    RP+  TF+ L++AC + +   +   +HG+ ++ G     +  S
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188

Query: 118 GFIENYAKSGE-IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGL 175
             +  Y K G+ +  A   F   L+ D VA+  M+ G+  NG+F   + +F EM    GL
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGL 248

Query: 176 ELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + +  +  ++L     + E  QIHG   K G    V   + +A+++LY +C       K+
Sbjct: 249 KPDRITFASLLKCCSVLNEVMQIHGIVYKFGAEVDVV--VESAMVDLYAKCRDVSSCRKI 306

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD + + D   WS  I+       G EA   FKD+     +++++ + + L +      L
Sbjct: 307 FDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDL 366

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G Q+     K G      + + L+++Y   G++ D   +F  +  KD V+WNSMI   
Sbjct: 367 NTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQ 426

Query: 353 SENGF-FNQALDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           +  G    + + +F  +   + +   G T+ ++L++      L    Q+HS I+KS    
Sbjct: 427 ARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCR 486

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
              + + L+  Y +C  ++++ +   +I +K+    +++          ++ALEL + + 
Sbjct: 487 HTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEML 546

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                    +  + + AC+ +  + +GK +H  A+K+ Y  D+++ S++IDMY KCG IE
Sbjct: 547 DEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIE 606

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           ++++ F +  + +   +NA++ GYA HG   +   + +K+ K GV P+ +T+LA++++C 
Sbjct: 607 ESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACS 666

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAG V E     + M D + + P+ EHY+C+VD  GR G LE A   + +         W
Sbjct: 667 HAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAW 723

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           ++LLSAC  + N  +G  +  K++EL P + + Y+LLSN+Y   G W +    RK+M + 
Sbjct: 724 RTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKI 783

Query: 711 FLCKEPGYSWI 721
            + K+PG SW+
Sbjct: 784 RVKKDPGNSWL 794



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 141/301 (46%), Gaps = 5/301 (1%)

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           IL    QI A      ++    + N L+S Y K    + A  +FD +  ++ V+W ++I+
Sbjct: 63  ILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLIS 122

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            + + G  ++A +MF HM      PN  T A +L A +N +     +Q+H  +++ G   
Sbjct: 123 SHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLER 182

Query: 411 DDSMISCLITTYGK-CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           +    S L+  Y K  + L ++ RV   + +++ V  N + S             L+  +
Sbjct: 183 EKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEM 242

Query: 470 W-GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           W     + +  TF+ +LK C+ + ++ Q   IH +  K   + D+ VESA++D+Y KC  
Sbjct: 243 WEEQGLKPDRITFASLLKCCSVLNEVMQ---IHGIVYKFGAEVDVVVESAMVDLYAKCRD 299

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +   ++ F  + +     W++M+ GY  +    E  N F  M +  VK D+    + L +
Sbjct: 300 VSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKA 359

Query: 589 C 589
           C
Sbjct: 360 C 360



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 137/284 (48%), Gaps = 19/284 (6%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L   SN   L Q  Q+H+ +I + ++    + + L++ Y K +  + + ++  ++  +N 
Sbjct: 55  LAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNV 114

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           V    L S  +     ++A E++  +  S    N +TF+++L+AC        G  IH L
Sbjct: 115 VTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGL 174

Query: 504 ALKARYDQDIFVESAVIDMYCKCG-TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
            ++   +++ F  S+++ MY K G  + DA R F  +    +  WN M+ G+AQ+G +  
Sbjct: 175 LVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRM 234

Query: 563 VSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH---- 617
           V  LF++M  + G+KPD IT+ A L  CC         + L+ +  +HG++ +       
Sbjct: 235 VQRLFSEMWEEQGLKPDRITF-ASLLKCC---------SVLNEVMQIHGIVYKFGAEVDV 284

Query: 618 --YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
              + +VDL  +   +   +   D M    D  +W S++S  T+
Sbjct: 285 VVESAMVDLYAKCRDVSSCRKIFDSME-KKDNFVWSSMISGYTM 327


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 198/637 (31%), Positives = 327/637 (51%), Gaps = 9/637 (1%)

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLT 183
           K+  +  A   F      D V++T ++ GYV + +  ++  +F +MR    L ++ F L+
Sbjct: 61  KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120

Query: 184 AVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
             L   G   +   G  +HGF VK G ++ V   + +A++++Y++ G+   + K+FDE+ 
Sbjct: 121 LGLKTCGLGLNYLYGTNLHGFSVKTGLVNSV--FVGSALLDMYMKIGEIGRSCKVFDEMP 178

Query: 241 EPDVVSWSERIAAACD-GVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             + V+W+  I      G    GL  F  +  +  + + Y     L +      L  G+ 
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I     K GF E   + N+L +MY KCG+++     F  +   D VSW +++  Y + G 
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            +  L  F  M   ++IPN YT ++++   +N   LK   Q+H+H++  GF+   S+ + 
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANS 358

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           ++T Y KC  L    +V   +  ++ +  + + +         EA E    +     + N
Sbjct: 359 IMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPN 418

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
               + VL  C +M  LEQGK +H   L    +Q   V SA+I MY KCG+I +A + F 
Sbjct: 419 EFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFM 478

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
              +D +  W AM+ GYA+HG   E   LF  + K G++PD +T++ VLT+C HAG+V  
Sbjct: 479 DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL 538

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y + MS  + + P  EHY C++DLL R G L  A+  I  MPI  D  +W +LL AC
Sbjct: 539 GFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRAC 598

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+G++D G  A +++L+L P+   T++ L+N++A+ G W +   +R  MK K + KEPG
Sbjct: 599 RIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPG 658

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +S + V      F +GD SH Q ++IY  L +L   M
Sbjct: 659 WSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGM 695



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 271/588 (46%), Gaps = 49/588 (8%)

Query: 9   NGHHL-DPILSTTLISHFTKFADFRRA---------------FRFLFDT-QNRDIITYNA 51
           N  HL    LS TL +HF+   D   A                R LFD    RD +++  
Sbjct: 26  NPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTN 85

Query: 52  LISGLARFCQSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQENEI----VHGVCLK 106
           +ISG      S  AL+LF ++R Q  LR D F  S  +K CG L  N +    +HG  +K
Sbjct: 86  IISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG-LGLNYLYGTNLHGFSVK 144

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
            G  + V++ S  ++ Y K GEI  +   F +    + V +TA++ G V  G  +     
Sbjct: 145 TGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAY 204

Query: 167 FVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F  M    +E + ++    L AS D   +  G  IH   +K GF     + + N++  +Y
Sbjct: 205 FSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDEN--SFVANSLTTMY 262

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVEAFGL--FKDLRFNDFQINEYTMI 280
            +CG+    +  F ++   DVVSW+  + A    G E  GL  FK +R ++   NEYT  
Sbjct: 263 NKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFS 322

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            ++S       L+ G+Q+ A    VGF+  +S+ N+++++Y KCG++     +F  + F+
Sbjct: 323 AVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D ++W+++IA YS+ G+  +A +    M      PN + +AS+L    +   L+Q  Q+H
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH 442

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +H++  G      + S LI  Y KC ++ E+ ++  +  K + +   A+ S         
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDL------EQGKAIHCLALKARYDQD 512
           EA+EL+  I       +  TF  VL AC  A M DL         K  H    K  Y   
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY--- 559

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHG 558
                 +ID+ C+ G + DA+   R   I  D +  W+ ++     HG
Sbjct: 560 ----GCMIDLLCRAGRLHDAETLIRSMPIQWDDVV-WSTLLRACRIHG 602



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 202/399 (50%), Gaps = 11/399 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            ++   +K G      + + L+  + K  +  R+ +   +   R+ +T+ A+I+GL R  
Sbjct: 137 NLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAG 196

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S   L  F  +    +  D++ ++  +KA    G+L     +H   LK GF    ++ +
Sbjct: 197 YSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVAN 256

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                Y K G++      FR    LD V++T +V  Y+  G+ D   + F  MR+  +  
Sbjct: 257 SLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIP 316

Query: 178 NEFSLTAVLG--ASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE++ +AV+   A+F  +K GEQ+H   + VGF++ +   + N+IM LY +CG+     K
Sbjct: 317 NEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS--VANSIMTLYSKCGELASVSK 374

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   D+++WS  IAA      G EAF     +R    + NE+ + ++LS  G   I
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ+ A    VG  +   + +ALI MY KCG + +A  IF      D +SW +MI+G
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           Y+E+G   +A+++F ++ +  L P+  T   +L A S++
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHA 533



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 27/215 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++  G     ++ + LI  + K      A +   D+   DII++ A+ISG A   
Sbjct: 440 QLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHG 499

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGF-----SSRVYL 115
            S  A++LF+ ++  GLRPD+ TF  ++ AC         H   + LGF      S+ Y 
Sbjct: 500 HSQEAIELFENIQKVGLRPDSVTFIGVLTACS--------HAGMVDLGFYYFNSMSKDYH 551

Query: 116 VSGFIENYA-------KSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           ++   E+Y        ++G +  AE   R   +  D+V ++ ++     +G+ D  +   
Sbjct: 552 ITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAA 611

Query: 168 VEMRSLGLELN----EFSLTAVLGASFDVKEGEQI 198
            E+  L L+ N      +L  +  A    KE   I
Sbjct: 612 AEV--LKLDPNCAGTHITLANIFAAKGKWKEAANI 644


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 216/674 (32%), Positives = 329/674 (48%), Gaps = 107/674 (15%)

Query: 185 VLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           +L  S  +K+   G  +H   +K G   GV  +L N +M  Y + G    A  +FDE+  
Sbjct: 16  ILQTSVRIKDPFAGRSVHCQIIKKGLHLGV--YLMNNLMTFYAKTGSLRFAHHVFDEMPL 73

Query: 242 PDVVSWSERIA------------------AACD---------GVEAFGLFKDLRF----- 269
               SW+  I+                    CD         G   FGLF +  +     
Sbjct: 74  KSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKM 133

Query: 270 --NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                  +++T+ N+LSS    + L  G++I +F  K+G    V +  +L++MY KCG  
Sbjct: 134 ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDP 193

Query: 328 NDARSIFDYLIFK-------------------------------DSVSWNSMIAGYSENG 356
             A+ +FD +  K                               D VSWNSMI+GYS+ G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253

Query: 357 FFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           +  +AL +F  ML E SL P+ +T+ASIL A +N + L    Q+H++I+++      ++ 
Sbjct: 254 YNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL---------------------- 453
           + LI+ Y K   + E  R++ E ++ + ++I A  S+L                      
Sbjct: 314 NALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372

Query: 454 ------------VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
                       V      +ALEL+R +     E N  T + +L   +++T LE GK IH
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR-KICRDSLAGWNAMMMGYAQHGCY 560
             A+KA       V +A+I MY K G I  AKR F     +  +  W +M+M  AQHG  
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            E  NLF +M   G+KPD ITY+ VL++C H GLV + R Y + M+++H + P L HYAC
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           ++DL GR GLL+ A + I+ MPI PD   W SLL++C I+ N DL  +A  +LL + P N
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
              Y+ L+N+Y++ G W +  + RK MK++ + KE G SWIH+    H F   D  H Q 
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672

Query: 741 KEIYKELIKLYEHM 754
            EIYK + +++E +
Sbjct: 673 DEIYKLMAEIWEEI 686



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 219/487 (44%), Gaps = 75/487 (15%)

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  YAK G    +     +  D D V++TA++ GY   G FD +  +F +M S  +  +
Sbjct: 82  LISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPS 141

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F+++ VL    A+  +  G +IH F VK+G   G C  +  +++N+Y +CG  + A  +
Sbjct: 142 QFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL--GSCVPVATSLLNMYAKCGDPVIAKVV 199

Query: 236 FDEIT-------------------------------EPDVVSWSERIAAACD---GVEAF 261
           FD +T                               + D+VSW+  I+        +EA 
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEAL 259

Query: 262 GLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
            +F K L     + + +T+ ++LS+      L  GKQI A+  +       ++GNALISM
Sbjct: 260 AIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISM 319

Query: 321 YGKC---------------------------------GQVNDARSIFDYLIFKDSVSWNS 347
           Y K                                  G V  AR IF+ L  +D V+W +
Sbjct: 320 YAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTA 379

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI GY +NG +N AL++F  M+     PN YT+A++L   S+   L+   Q+H+  IK+G
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELY 466
                S+ + LI  Y K   +N +KRV    + KK  V   ++   L       EA+ L+
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLF 499

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYCK 525
             +     + +  T+  VL AC  +  +EQG+  + +  +    +      A +ID+Y +
Sbjct: 500 ERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGR 559

Query: 526 CGTIEDA 532
            G +++A
Sbjct: 560 AGLLQEA 566



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 228/499 (45%), Gaps = 86/499 (17%)

Query: 15  PILST----TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           P+ ST    TLIS + K  +F  + R L++  + D +++ A+I G  +F     A+ +F 
Sbjct: 72  PLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           ++  + + P  FT S+++ +C + Q  +I   +H   +KLG  S V + +  +  YAK G
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 128 EIVSAEMCF-------------------------------RDCLDLDNVAYTAMVCGYVW 156
           + V A++ F                                   D D V++ +M+ GY  
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQ 251

Query: 157 NGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKE---GEQIHGF----------- 201
            G   ++  +F +M     L+ + F+L ++L A  ++++   G+QIH +           
Sbjct: 252 QGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311

Query: 202 -------------GVKVGFLSGVCNHLNN-------AIMNLYVRCGQKLDAVKMFDEITE 241
                        GV++  L    N  +N       ++++ Y + G    A ++F+++ +
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371

Query: 242 PDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DVV+W+  I     +G+  +A  LF+ +     + N YT+  +LS      IL  GKQI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGF 357
            A   K G     S+ NALI+MY K G +N A+ +FD     K+ VSW SMI   +++G 
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-----MQVHSHIIKSGFLLDD 412
             +A+++F  ML   + P+  T   +L A ++   ++Q      M    H I+       
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTL---- 547

Query: 413 SMISCLITTYGKCNALNES 431
           S  +C+I  YG+   L E+
Sbjct: 548 SHYACMIDLYGRAGLLQEA 566



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 177/376 (47%), Gaps = 48/376 (12%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRP 79
           LIS + +   F  A        +RDI+++N++ISG ++   +  AL +F + L    L+P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKP 273

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSR---------VYLVSGFIE------ 121
           D FT +S++ AC +L++  I   +H   L+    +          +Y  SG +E      
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333

Query: 122 ------------------NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                              Y K G +  A   F    D D VA+TAM+ GYV NG ++ +
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            E+F  M + G E N ++L A+L  S     ++ G+QIH   +K G  S     + NA++
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESS--TPSVTNALI 451

Query: 221 NLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINE 276
            +Y + G    A ++FD    + ++VSW+  I A      G EA  LF+ +     + + 
Sbjct: 452 AMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDH 511

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFD 335
            T + +LS+     ++  G++      +V  +E  +S    +I +YG+ G + +A    +
Sbjct: 512 ITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIE 571

Query: 336 YL-IFKDSVSWNSMIA 350
            + I  D+++W S++A
Sbjct: 572 SMPIEPDNIAWGSLLA 587



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 131/267 (49%), Gaps = 19/267 (7%)

Query: 1   QIYSLLIKNGH--HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           +I  L++++    +L+ I  T+L+  +TK  + + A       ++RD++ + A+I G  +
Sbjct: 327 EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ 386

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
                 AL+LF  +  +G  P+++T ++++    S   L+  + +H   +K G SS   +
Sbjct: 387 NGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSV 446

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-----VAYTAMVCGYVWNGEFDKSKEVFVEM 170
            +  I  YAK+G I  A+  F    DL N     V++T+M+     +G   ++  +F  M
Sbjct: 447 TNALIAMYAKTGNINVAKRVF----DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERM 502

Query: 171 RSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            S+G++ +  +   VL A      V++G + +    +V  +    +H    +++LY R G
Sbjct: 503 LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY-ACMIDLYGRAG 561

Query: 228 QKLDAVKMFDEIT-EPDVVSWSERIAA 253
              +A    + +  EPD ++W   +A+
Sbjct: 562 LLQEAYLFIESMPIEPDNIAWGSLLAS 588



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 51/239 (21%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F+ +L+    + D   G+++HC  +K      +++ + ++  Y K G++  A   F ++ 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSN--------------------------------LFN 568
             S   WN ++ GYA+ G + EVS                                 +F 
Sbjct: 73  LKSTFSWNTLISGYAKQGNF-EVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI------V 622
           KM    V P + T   VL+SC        A   L     +H  + +L   +C+      +
Sbjct: 132 KMISERVPPSQFTVSNVLSSCA-------ANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           ++  + G    AK+  D+M +  +   W +L+S     G  +L     +   E  PD +
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTV-KNISTWNALISLYMQSGQFEL----AASQFEKMPDRD 238


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 211/634 (33%), Positives = 331/634 (52%), Gaps = 17/634 (2%)

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           KSG +  A   F      + VA+T  + G   NG+ + +  +F +M   G+  N+F+  A
Sbjct: 54  KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113

Query: 185 VLGASFDVKE-----GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            L A           GEQ+H   V+ GF +     + + ++ LY RCG    A ++F  +
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADA--WIGSCLIELYSRCGSMWAAEEVFRRM 171

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
             PDVV ++  ++A C   D   A  +   +     Q NE+TM ++L+     R++  G+
Sbjct: 172 EAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAEC--PRMI--GE 227

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           QI  +  KV   + V    ALI  Y + G  + A ++F+ L  K+ VSW SM+     +G
Sbjct: 228 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDG 287

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
               AL +F  M+  ++ PN +  +  L A     S+    Q+H   IK   + D  + +
Sbjct: 288 RLEDALRVFSEMISEAVEPNEFAFSIALGACG---SVCLGRQIHCSAIKCNLMTDIRVSN 344

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L++ YG+   ++E + VL +I+  + V   A  S         +A+ L   +       
Sbjct: 345 ALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTP 404

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N   FS  L +CA +  L+QG+ +HCLALK   D  +   +A+I+MY KCG I  A+ AF
Sbjct: 405 NDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAF 464

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
             +    +  WN+++ G AQHG  + V   F++M   G +PD+ T++AVL  C HAGLV+
Sbjct: 465 DVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVK 524

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E  T+   M+D +GL P   HYAC++D+LGR G  + A   I  MP  PD  IW++LL++
Sbjct: 525 EGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLAS 584

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C ++ N+D+G LA  KL+EL   + ++YVL+SNLYA    W D  ++R+ M E  + K+ 
Sbjct: 585 CKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDA 644

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           G+SWI V      F A D+SHS S  IY+ L +L
Sbjct: 645 GWSWIEVKNEVSTFVARDTSHSDSASIYQMLAEL 678



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 214/435 (49%), Gaps = 7/435 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + LI  +++      A       +  D++ Y +L+S L R  
Sbjct: 131 QVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNG 190

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               A+++  ++  QGL+P+  T +S++  C  +   E +HG  LK+  S  VY  +  I
Sbjct: 191 DLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMI-GEQIHGYMLKVMGSQSVYASTALI 249

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + Y++ G+   AE  F +    + V++ +M+   + +G  + +  VF EM S  +E NEF
Sbjct: 250 DFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEF 309

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           + +  LGA   V  G QIH   +K   ++ +   ++NA++++Y R G   +   +  +I 
Sbjct: 310 AFSIALGACGSVCLGRQIHCSAIKCNLMTDI--RVSNALLSMYGRSGFVSEVEAVLGKIE 367

Query: 241 EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
            PD+VSW+  I+A        +A  L   +    F  N+Y   + LSS     +L  G+Q
Sbjct: 368 NPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQ 427

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +     K+G    V  GNALI+MY KCGQ+  AR  FD +   D +SWNS+I G +++G 
Sbjct: 428 LHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGA 487

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSMIS 416
            N  L+ F  M      P+  T  ++L   +++  +K+       +  + G     S  +
Sbjct: 488 ANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYA 547

Query: 417 CLITTYGKCNALNES 431
           C+I   G+    +E+
Sbjct: 548 CMIDMLGRNGRFDEA 562



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 257/588 (43%), Gaps = 55/588 (9%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD   R +++ +   ISG  R  Q   A  +F  +   G+  + F  ++ + AC +   
Sbjct: 64  LFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGA 123

Query: 97  -----NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
                 E VH + ++ GF++  ++ S  IE Y++ G + +AE  FR     D V YT++V
Sbjct: 124 GALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLV 183

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGV 211
                NG+  ++ EV  +M   GL+ NE ++T++L A      GEQIHG+ +KV     V
Sbjct: 184 SALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSML-AECPRMIGEQIHGYMLKVMGSQSV 242

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLR 268
             + + A+++ Y R G    A  +F+ +   +VVSW   +     DG   +A  +F ++ 
Sbjct: 243 --YASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMI 300

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
               + NE+     L + G   +   G+QI     K   M  + + NAL+SMYG+ G V+
Sbjct: 301 SEAVEPNEFAFSIALGACGSVCL---GRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVS 357

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           +  ++   +   D VSW + I+   +NGF  +A+ +   M      PN Y  +S L + +
Sbjct: 358 EVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCA 417

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           +   L Q  Q+H   +K G        + LI  Y KC  +  ++     ++  + +  N+
Sbjct: 418 DLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNS 477

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA--------- 499
           L   L         LE +  +  S  + + STF  VL  C     +++G+          
Sbjct: 478 LIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRY 537

Query: 500 ------------IHCLALKARYDQ------------DIFVESAVIDMYCKC-GTIEDAKR 534
                       I  L    R+D+            D+ +   ++   CK    ++  K 
Sbjct: 538 GLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLL-ASCKLHKNLDIGKL 596

Query: 535 AFRKIC----RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           A  K+     RDS A +  M   YA H  + +   +  +M + GVK D
Sbjct: 597 ATDKLMELSERDS-ASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKD 643



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 215/473 (45%), Gaps = 17/473 (3%)

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINE 276
           ++  ++ G+  DA+ +FD +   +VV+W+  I+      +   A  +F D+  +    N+
Sbjct: 49  LDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAAND 108

Query: 277 YTMINLLSSVGGERILRA--GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +     L++           G+Q+ +   + GF     IG+ LI +Y +CG +  A  +F
Sbjct: 109 FACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVF 168

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +   D V + S+++    NG   +A+++ C M+   L PN +TM S+L          
Sbjct: 169 RRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPR----M 224

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              Q+H +++K          + LI  Y +    + ++ V   +D KN V   ++  + +
Sbjct: 225 IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCI 284

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 +AL ++  +     E N   FSI L AC ++     G+ IHC A+K     DI 
Sbjct: 285 RDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVC---LGRQIHCSAIKCNLMTDIR 341

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++ MY + G + + +    KI    L  W A +    Q+G   +   L  +M   G
Sbjct: 342 VSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 401

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
             P++  + + L+SC    L+ + R  L C++   G   ++     ++++  + G +  A
Sbjct: 402 FTPNDYAFSSGLSSCADLALLDQGRQ-LHCLALKLGCDFKVCTGNALINMYSKCGQIGSA 460

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYV 685
           ++  D M +  D   W SL+     +G  +L L A S++     QPD +ST++
Sbjct: 461 RLAFDVMNL-HDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPD-DSTFI 511



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 171/358 (47%), Gaps = 10/358 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K         ST LI  ++++ DF  A     +  +++++++ +++    R  
Sbjct: 228 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDG 287

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   AL++F  +  + + P+ F FS  + ACGS+     +H   +K    + + + +  +
Sbjct: 288 RLEDALRVFSEMISEAVEPNEFAFSIALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALL 347

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y +SG +   E       + D V++TA +     NG  +K+  + ++M S G   N++
Sbjct: 348 SMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 407

Query: 181 SLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           + ++ L +  D   + +G Q+H   +K+G    VC    NA++N+Y +CGQ   A   FD
Sbjct: 408 AFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCT--GNALINMYSKCGQIGSARLAFD 465

Query: 238 EITEPDVVSWSERI-AAACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   DV+SW+  I   A  G     L  F ++  + +Q ++ T I +L       +++ 
Sbjct: 466 VMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKE 525

Query: 295 GKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
           G+   +    + G     S    +I M G+ G+ ++A  +   + F+ D + W +++A
Sbjct: 526 GETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLA 583


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 210/691 (30%), Positives = 347/691 (50%), Gaps = 47/691 (6%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH   LKL     ++L +  I  Y K G +  A+  F      + V+YTA++ G+  +  
Sbjct: 119 VHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDW 176

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
            D++ E+F  M   G+E NE++  A+L A   + D + G Q+HG  VK+G LS  C  + 
Sbjct: 177 EDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLS--CVFIC 234

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRF-NDF 272
           NA+M LY +CG     +++F+E+ E D+ SW+  I++        EAF  F+ ++     
Sbjct: 235 NALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGL 294

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +++ +++  LL++  G      G+Q+ A   KVG    +S+ ++LI  Y KCG  ND   
Sbjct: 295 KVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTD 354

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFN-------------------------------QA 361
           +F+ +  +D ++W  MI  Y E G  +                               +A
Sbjct: 355 LFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRA 414

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L++F  MLE  +  +  T+ SI+ A    KS K + Q+   ++K G L +  + + L+  
Sbjct: 415 LELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDM 474

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA--EALELYRTIWGSCREVNGS 479
           Y +C  + +++++  +   +N       + +  YA      EA+ L+ +       V   
Sbjct: 475 YTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDE 534

Query: 480 TFSI-VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
             S  +L  C ++   E G  +HC ALK+    +  V +A + MY KC  ++DA R F  
Sbjct: 535 VMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNT 594

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA--GLVR 596
           +    +  WN ++ G+  H    +   ++ KM K G+KPD IT+  ++++  H    LV 
Sbjct: 595 MNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVD 654

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             R+    M   H + P LEHYA  + +LGR GLLE A+ TI  MP+ PD ++W++LL++
Sbjct: 655 SCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I  N  L  LA   +L ++P +  +Y+L SNLY+++G W    K+R++M+EK   K P
Sbjct: 715 CRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHP 774

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             SWI      H FYA D SH Q K+IY  L
Sbjct: 775 SQSWIIHENKIHSFYARDRSHPQGKDIYSGL 805



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 275/587 (46%), Gaps = 52/587 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L   LIS + K    R A +        ++++Y ALISG ++      A++LF  + 
Sbjct: 129 DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAML 188

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+ P+ +TF +++ AC      Q    VHG+ +KLG  S V++ +  +  Y K G + 
Sbjct: 189 DSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLD 248

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGA- 188
                F +  + D  ++  ++   V   ++D++ + F  M+   GL+++ FSL+ +L A 
Sbjct: 249 LVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTAC 308

Query: 189 --SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             S    +G+Q+H   +KVG  S +   ++++++  Y +CG   D   +F+ +   DV++
Sbjct: 309 AGSVKPMKGQQLHALALKVGLESHL--SVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT 366

Query: 247 WSERIAAAC----------------------------------DGVEAFGLFKDLRFNDF 272
           W+  I +                                    DG  A  LF ++     
Sbjct: 367 WTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGV 426

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +I++ T+ +++++ G  +  +  +QIQ F  K G +    I  AL+ MY +CG++ DA  
Sbjct: 427 EISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEK 486

Query: 333 IFDYLIFKDSVS--WNSMIAGYSENGFFNQALDMF-CHMLEFSLIPNGYTMASILEAVSN 389
           IF     ++  +    SMI GY+ NG  N+A+ +F     E +++ +     SIL    +
Sbjct: 487 IFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGS 546

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
               +  MQ+H H +KSG + +  + +  ++ Y KC  ++++ RV + ++ ++ V  N L
Sbjct: 547 IGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGL 606

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +  V      +AL +++ +  +  + +  TF++++ A    T+L    +   L +    
Sbjct: 607 VAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISA-YKHTELNLVDSCRSLFVSMET 665

Query: 510 DQDIFVE----SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           + +I       ++ I +  + G +E+A++  R +     +  W A++
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++   +K+G   +  +    +S ++K  +   A R +F+T N +DI+++N L++G    
Sbjct: 555 QMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVR-VFNTMNMQDIVSWNGLVAGHVLH 613

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
            Q   AL ++ ++   G++PD+ TF+ ++ A
Sbjct: 614 WQGDKALGIWKKMEKAGIKPDSITFALIISA 644


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 198/637 (31%), Positives = 327/637 (51%), Gaps = 9/637 (1%)

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLT 183
           K+  +  A   F      D V++T ++ GYV + +  ++  +F +MR    L ++ F L+
Sbjct: 61  KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120

Query: 184 AVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
             L   G   +   G  +HGF VK G ++ V   + +A++++Y++ G+   + K+FDE+ 
Sbjct: 121 LGLKTCGLGLNYLYGTNLHGFSVKXGLVNSV--FVGSALLDMYMKIGEIGRSCKVFDEMP 178

Query: 241 EPDVVSWSERIAAACD-GVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             + V+W+  I      G    GL  F  +  +  + + Y     L +      L  G+ 
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I     K GF E   + N+L +MY KCG+++     F  +   D VSW +++  Y + G 
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            +  L  F  M   ++IPN YT ++++   +N   LK   Q+H+H++  GF+   S+ + 
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANS 358

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           ++T Y KC  L    +V   +  ++ +  + + +         EA E    +     + N
Sbjct: 359 IMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPN 418

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
               + VL  C +M  LEQGK +H   L    +Q   V SA+I MY KCG+I +A + F 
Sbjct: 419 EFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFM 478

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
              +D +  W AM+ GYA+HG   E   LF  + K G++PD +T++ VLT+C HAG+V  
Sbjct: 479 DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL 538

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y + MS  + + P  EHY C++DLL R G L  A+  I  MPI  D  +W +LL AC
Sbjct: 539 GFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRAC 598

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+G++D G  A +++L+L P+   T++ L+N++A+ G W +   +R  MK K + KEPG
Sbjct: 599 RIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPG 658

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +S + V      F +GD SH Q ++IY  L +L   M
Sbjct: 659 WSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGM 695



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 271/588 (46%), Gaps = 49/588 (8%)

Query: 9   NGHHL-DPILSTTLISHFTKFADFRRA---------------FRFLFDT-QNRDIITYNA 51
           N  HL    LS TL +HF+   D   A                R LFD    RD +++  
Sbjct: 26  NPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTN 85

Query: 52  LISGLARFCQSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQENEI----VHGVCLK 106
           +ISG      S  AL+LF ++R Q  LR D F  S  +K CG L  N +    +HG  +K
Sbjct: 86  IISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG-LGLNYLYGTNLHGFSVK 144

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
            G  + V++ S  ++ Y K GEI  +   F +    + V +TA++ G V  G  +     
Sbjct: 145 XGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAY 204

Query: 167 FVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F  M    +E + ++    L AS D   +  G  IH   +K GF     + + N++  +Y
Sbjct: 205 FSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDEN--SFVANSLTTMY 262

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-GVEAFGL--FKDLRFNDFQINEYTMI 280
            +CG+    +  F ++   DVVSW+  + A    G E  GL  FK +R ++   NEYT  
Sbjct: 263 NKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFS 322

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            ++S       L+ G+Q+ A    VGF+  +S+ N+++++Y KCG++     +F  + F+
Sbjct: 323 AVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR 382

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D ++W+++IA YS+ G+  +A +    M      PN + +AS+L    +   L+Q  Q+H
Sbjct: 383 DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH 442

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +H++  G      + S LI  Y KC ++ E+ ++  +  K + +   A+ S         
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQ 502

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDL------EQGKAIHCLALKARYDQD 512
           EA+EL+  I       +  TF  VL AC  A M DL         K  H    K  Y   
Sbjct: 503 EAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY--- 559

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHG 558
                 +ID+ C+ G + DA+   R   I  D +  W+ ++     HG
Sbjct: 560 ----GCMIDLLCRAGRLHDAETLIRSMPIQWDDVV-WSTLLRACRIHG 602



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 202/399 (50%), Gaps = 11/399 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            ++   +K G      + + L+  + K  +  R+ +   +   R+ +T+ A+I+GL R  
Sbjct: 137 NLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAG 196

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S   L  F  +    +  D++ ++  +KA    G+L     +H   LK GF    ++ +
Sbjct: 197 YSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVAN 256

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                Y K G++      FR    LD V++T +V  Y+  G+ D   + F  MR+  +  
Sbjct: 257 SLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIP 316

Query: 178 NEFSLTAVLG--ASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE++ +AV+   A+F  +K GEQ+H   + VGF++ +   + N+IM LY +CG+     K
Sbjct: 317 NEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS--VANSIMTLYSKCGELASVSK 374

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   D+++WS  IAA      G EAF     +R    + NE+ + ++LS  G   I
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ+ A    VG  +   + +ALI MY KCG + +A  IF      D +SW +MI+G
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           Y+E+G   +A+++F ++ +  L P+  T   +L A S++
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHA 533



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 27/215 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++  G     ++ + LI  + K      A +   D+   DII++ A+ISG A   
Sbjct: 440 QLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHG 499

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGF-----SSRVYL 115
            S  A++LF+ ++  GLRPD+ TF  ++ AC         H   + LGF      S+ Y 
Sbjct: 500 HSQEAIELFENIQKVGLRPDSVTFIGVLTACS--------HAGMVDLGFYYFNSMSKDYH 551

Query: 116 VSGFIENYA-------KSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           ++   E+Y        ++G +  AE   R   +  D+V ++ ++     +G+ D  +   
Sbjct: 552 ITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAA 611

Query: 168 VEMRSLGLELN----EFSLTAVLGASFDVKEGEQI 198
            E+  L L+ N      +L  +  A    KE   I
Sbjct: 612 AEV--LKLDPNCAGTHITLANIFAAKGKWKEAANI 644


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 229/737 (31%), Positives = 358/737 (48%), Gaps = 67/737 (9%)

Query: 74  YQGLRPDAFTFSSL------VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           +Q L+   F+ S+L      +  C ++ + +++H   L  G  + + L S  I  Y   G
Sbjct: 15  HQHLKVSLFSTSALEITPPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLG 73

Query: 128 EIVSAEMCFRDCLDLDNVAY--TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            +  A    R     D   Y   +++  Y  NG  +K    F  M SL    + ++   V
Sbjct: 74  CLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFV 133

Query: 186 LGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
             A  +   V+ G+  H      GF+S V   + NA++ +Y RCG   DA K+FDE+   
Sbjct: 134 FKACGEISSVRCGDSSHALSRVTGFMSNV--FVGNALVAMYSRCGSLSDARKVFDEMPVW 191

Query: 243 DVVSWS---ERIAAACDGVEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQI 298
           DVVSW+   E  A       A  +F  +     F+ ++ T++N+L           GKQ 
Sbjct: 192 DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQF 251

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             F      ++ + +GN L+ MY K G +++A ++F  +  KD VSWN+M+AGYS+ G F
Sbjct: 252 HGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRF 311

Query: 359 NQALDMF----------------------------------C-HMLEFSLIPNGYTMASI 383
             A+ +F                                  C  ML   + PN  T+ S+
Sbjct: 312 EDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLL------DDSM-ISCLITTYGKCNALNESKRVLS 436
           L   ++  +L    ++H + IK    L      D++M I+ LI  Y KC  ++ ++ +  
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFD 431

Query: 437 EIDKKNAVHINALASVLVYASCHAEA---LELYRTIWGS-CR-EVNGSTFSIVLKACAAM 491
            +  K    +     +  Y+  H +A   LEL   ++   C+   N  T S  L ACA++
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQ-HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490

Query: 492 TDLEQGKAIHCLALKARYDQ-DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
             L  GK IH  AL+ + +   +FV + +IDMY KCG I DA+  F  +   +   W ++
Sbjct: 491 AALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSL 550

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           M GY  HG   E   +F +M + G K D +T L VL +C H+G++ +   Y + M    G
Sbjct: 551 MTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFG 610

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           + P  EHYAC+VDLLGR G L  A   I++MP+ P   +W +LLS C I+G ++LG  A 
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAA 670

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
            K+ EL  +N+ +Y LLSN+YA+AG W DV ++R  M+ K + K PG SW+     T  F
Sbjct: 671 KKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTF 730

Query: 731 YAGDSSHSQSKEIYKEL 747
           + GD +H  +KEIY+ L
Sbjct: 731 FVGDKTHPHAKEIYQVL 747



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 248/540 (45%), Gaps = 61/540 (11%)

Query: 17  LSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           L++ LIS +        A   L  F   +  +  +N+LI       ++   L  F  +  
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 75  QGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
               PD +TF  + KACG   S++  +  H +    GF S V++ +  +  Y++ G +  
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-LGLELNEFSLTAVLGASF 190
           A   F +    D V++ +++  Y   G+   + E+F +M +  G   ++ +L  VL    
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 191 DVKE---GEQIHGFGVKVGFLS---------------GVCNHLN--------------NA 218
            V     G+Q HGF V    +                G+ +  N              NA
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300

Query: 219 IMNLYVRCGQKLDAVKMFDEITEP----DVVSWSERIAAACD---GVEAFGLFKDLRFND 271
           ++  Y + G+  DAV++F+++ E     DVV+WS  I+       G EA G+ + +  + 
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF-MEVVSIG--------NALISMYG 322
            + NE T+I++LS       L  GK+I   CY + + M++   G        N LI MY 
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIH--CYAIKYPMDLRKNGHGDENMVINQLIDMYA 418

Query: 323 KCGQVNDARSIFDYLIFK--DSVSWNSMIAGYSENGFFNQALDMFCHMLE--FSLIPNGY 378
           KC +V+ AR++FD L  K  D V+W  MI GYS++G  N+AL++   M E      PN +
Sbjct: 419 KCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKRVLSE 437
           T++  L A ++  +L    Q+H++ +++        +S CLI  Y KC  + +++ V   
Sbjct: 479 TISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDN 538

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + +KN V   +L +         EAL ++  +     +++G T  +VL AC+    ++QG
Sbjct: 539 MMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 168/364 (46%), Gaps = 29/364 (7%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLARFCQSGPALKLF 69
           D +    +++ +++   F  A R     Q      D++T++A ISG A+      AL + 
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353

Query: 70  DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL-------GFSSRVYLVSGF 119
            ++   G++P+  T  S++  C   G+L   + +H   +K        G      +++  
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQL 413

Query: 120 IENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLG 174
           I+ YAK  ++  A   F D L   + D V +T M+ GY  +G+ +K+ E+  EM      
Sbjct: 414 IDMYAKCKKVDIARAMF-DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              N F+++  L A   +     G+QIH + ++    + V   ++N ++++Y +CG   D
Sbjct: 473 TRPNAFTISCALVACASLAALSIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAKCGDIGD 531

Query: 232 AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD + E + V+W+  +        G EA G+F+++R   F+++  T++ +L +   
Sbjct: 532 ARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSH 591

Query: 289 ERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWN 346
             ++  G +         G          L+ + G+ G++N A R I +  +    V W 
Sbjct: 592 SGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWV 651

Query: 347 SMIA 350
           ++++
Sbjct: 652 ALLS 655


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 186/544 (34%), Positives = 296/544 (54%), Gaps = 3/544 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFND 271
           L N+++ +Y +CG   DA K+FDE+ E ++VSW+  I+A A +GV  + F +F ++   +
Sbjct: 47  LENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELE 106

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + N  T I  L S+     L  GKQI +   + G     S+  A+ +MY KCG +  A 
Sbjct: 107 TKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAE 166

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ +  K++V+W  ++ GY++      AL +F  M+   +  + Y  + +L+A +  +
Sbjct: 167 LVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLE 226

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L    Q+H HI+K G   + S+ + L+  Y KC+ L  + +    I + N V  +AL +
Sbjct: 227 ELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALIT 286

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    EAL+ + ++     ++N  T++ + +AC+A+ D   G   H  A+K+    
Sbjct: 287 GYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVA 346

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
               ESA+I MY +CG ++ A R F  I       W A++ GYA  G   E   LF +M 
Sbjct: 347 YQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQ 406

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             GV+P+ +T++AVLT+C H+GLV E R YL  MS  +G+   ++HY C+VD+  R G L
Sbjct: 407 DCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFL 466

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A   I  MP  PDA  W+ LL  C  Y N+++G LA   L +L P++ + Y+L+ NLY
Sbjct: 467 QEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLY 526

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           AS G W +   +RK M E+ L KE   SWI V G  H F  GD  H Q++EIY +L  L 
Sbjct: 527 ASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALN 586

Query: 752 EHMV 755
           + ++
Sbjct: 587 DSVI 590



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 230/491 (46%), Gaps = 17/491 (3%)

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+     ++  L +ACG   SL +  + H    +   +   +L +  ++ Y K G +  A
Sbjct: 5   GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
              F +  + + V++  ++  Y  NG FDK   +F  M  L  + N  +    L +  + 
Sbjct: 65  RKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNP 124

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++ G+QIH   ++ G   G    +N AI N+YV+CG    A  +F++++E + V+W+ 
Sbjct: 125 SGLEIGKQIHSHAIRSGL--GSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTG 182

Query: 250 RIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            +     A   ++A  LF  +     +++EY    +L +  G   L  G+QI     K+G
Sbjct: 183 IMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLG 242

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               VS+G  L+  Y KC  +  A   F+++   + VSW+++I GY + G F +AL  F 
Sbjct: 243 LESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFE 302

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            +   S+  N +T  SI +A S         Q H+  IKS  +      S +IT Y +C 
Sbjct: 303 SLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCG 362

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L+ + RV   ID  +AV   A+ +   Y     EAL+L+R +       N  TF  VL 
Sbjct: 363 RLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLT 422

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI--CRD 542
           AC+    + +G+  +  ++ + Y     ++    ++D+Y + G +++A    R +    D
Sbjct: 423 ACSHSGLVIEGRQ-YLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPD 481

Query: 543 SLAGWNAMMMG 553
           +++ W  ++ G
Sbjct: 482 AMS-WKCLLGG 491



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 224/477 (46%), Gaps = 35/477 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S  I++G   +  ++T + + + K      A         ++ + +  ++ G  +  
Sbjct: 132 QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAE 191

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +   AL LF ++  +G+  D + FS ++KAC  L+E      +HG  +KLG  S V + +
Sbjct: 192 RQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGT 251

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   + SA   F    + ++V+++A++ GY   GEF+++ + F  +R+  +++
Sbjct: 252 PLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDI 311

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N F+ T++     A  D   G Q H   +K   ++    H  +A++ +Y RCG+   A +
Sbjct: 312 NSFTYTSIFQACSALADFNSGAQAHADAIKSSLVA--YQHGESAMITMYSRCGRLDYATR 369

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ I +PD V+W+  IA      +  EA  LF+ ++    + N  T I +L++     +
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGL 429

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMI 349
           +  G+Q +++     G    +   + ++ +Y + G + +A  +   + F  D++SW  ++
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489

Query: 350 AG------------YSENGFFNQALDMFCHMLEFSLIPN--GYTMASILEAVSNSKSLKQ 395
            G             +EN F     D   ++L F+L  +   +  A+ +  +   ++L++
Sbjct: 490 GGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRK 549

Query: 396 AMQVHSHIIKSG---FLLDDSMISCLITTYGKCNALNES-----KRVLSEIDKKNAV 444
            +      +K     F++ D         Y K  ALN+S       +L+E D  N++
Sbjct: 550 ELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSL 606



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 4/184 (2%)

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           V+  ++  + +AC  +  L  G+  H    +   +   F+E++V+ MYCKCG++ DA++ 
Sbjct: 8   VSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKV 67

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGL 594
           F ++   +L  WN ++  YA++G + +   +F+ M +   KP+  TY+  L S  + +GL
Sbjct: 68  FDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGL 127

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
             E    +   +   GL         I ++  + G LEGA++  ++M    +A  W  ++
Sbjct: 128 --EIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMS-EKNAVAWTGIM 184

Query: 655 SACT 658
              T
Sbjct: 185 VGYT 188


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 219/740 (29%), Positives = 373/740 (50%), Gaps = 26/740 (3%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF-DRLRYQGLRP 79
           +++  T  A  +R+ +F   T+    + ++    G         AL  F D  R QG   
Sbjct: 1   MLTSMTLLAPAKRSTKF--PTRTPWTMPFSTTWQGFVH-----QALDHFLDAHRRQGRCV 53

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMC 135
                  ++K CGS+ +  +   +H +C++ G     + + +  ++ Y     ++     
Sbjct: 54  GGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKV 113

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDV 192
           F   L  + V +T+++ GY+  G       +F  MR+ G+  N F+ ++VL    +   V
Sbjct: 114 FEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMV 173

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G+ +H   +K G  S V   + N++MN+Y +CG   +A  +F  +   D+VSW+  +A
Sbjct: 174 DLGQHVHAQSIKFGCCSTV--FVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMA 231

Query: 253 AAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                   +EA  LF D R +   + E T   +++     + L   +Q+ +   K GF  
Sbjct: 232 GLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHS 291

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             ++  AL+  Y K GQ++ A  +F  +   ++ VSW +MI G  +NG    A  +F  M
Sbjct: 292 YGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRM 351

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            E  + PN  T ++IL     S       Q+H+ +IK+ +    ++ + L+ +Y K  + 
Sbjct: 352 REDGVAPNDLTYSTILTVSEASF----PPQIHAQVIKTNYECTPTVGTALMVSYSKLCST 407

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E+  +   ID+K+ V  +A+ +    A     A   +  +     + N  T S  + AC
Sbjct: 408 EEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDAC 467

Query: 489 AA-MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           A+    ++ G+  H +++K R    + V SA++ MY + G+IE+A+  F +     L  W
Sbjct: 468 ASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSW 527

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N+M+ GYAQHG   +  ++F +M   G+  D +T+L+V+  C HAGLV E + Y   M  
Sbjct: 528 NSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVR 587

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            +G+ P ++HYAC+VDL  R G L+     I+ MP P    IW++LL AC ++ N++LG 
Sbjct: 588 DYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGK 647

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
           LA  KLL L+P + +TYVLLSN+Y++AG W +  ++RK M  K + KE G SWI +    
Sbjct: 648 LAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKV 707

Query: 728 HHFYAGDSSHSQSKEIYKEL 747
           H F A D SH  S++IY +L
Sbjct: 708 HFFIASDKSHPLSEQIYAKL 727



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 262/550 (47%), Gaps = 31/550 (5%)

Query: 1   QIYSLLIKNGH-HLDPILSTTLISHFTKF---ADFRRAFRFLFDTQNRDIITYNALISGL 56
           Q+++L ++ GH H D  + T+L+  +  +    D R+ F  +     R+++T+ +L++G 
Sbjct: 76  QLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGML---KRNVVTWTSLLTG- 131

Query: 57  ARFCQSG---PALKLFDRLRYQGLRPDAFTFS---SLVKACGSLQENEIVHGVCLKLGFS 110
             + Q+G     + LF R+R +G+ P+ FTFS   S+V + G +   + VH   +K G  
Sbjct: 132 --YIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCC 189

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
           S V++ +  +  YAK G +  A + F      D V++  ++ G V NG   ++ ++F + 
Sbjct: 190 STVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDS 249

Query: 171 RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           RS    L E + + V+    ++K      Q+H   +K GF S    ++  A+M+ Y + G
Sbjct: 250 RSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHS--YGNVMTALMDAYNKAG 307

Query: 228 QKLDAVKMFDEIT-EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLL 283
           Q   A+ +F  ++   +VVSW+  I       D   A  LF  +R +    N+ T   +L
Sbjct: 308 QLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL 367

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           +            QI A   K  +    ++G AL+  Y K     +A SIF  +  KD V
Sbjct: 368 TVSEAS----FPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVV 423

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSH 402
           SW++M+  Y++ G  N A + F  M    L PN +T++S ++A  S +  +    Q H+ 
Sbjct: 424 SWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAI 483

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            IK        + S L++ Y +  ++  ++ V      ++ +  N++ S         +A
Sbjct: 484 SIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKA 543

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VID 521
           L+++R +     +++G TF  V+  CA    +E+G+    L ++           A ++D
Sbjct: 544 LDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVD 603

Query: 522 MYCKCGTIED 531
           +Y + G +++
Sbjct: 604 LYSRAGKLDE 613



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/361 (19%), Positives = 170/361 (47%), Gaps = 13/361 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNRDIITYNALISGLARF 59
           Q++S ++K+G H    + T L+  + K     +A   FL  + +++++++ A+I G  + 
Sbjct: 279 QLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQN 338

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
                A  LF R+R  G+ P+  T+S+++    +    +I H   +K  +     + +  
Sbjct: 339 GDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQI-HAQVIKTNYECTPTVGTAL 397

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           + +Y+K      A   F+     D V+++AM+  Y   G+ + +   F++M   GL+ NE
Sbjct: 398 MVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNE 457

Query: 180 FSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           F++++ + A    +  V  G Q H   +K      +C  +++A++++Y R G   +A  +
Sbjct: 458 FTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALC--VSSALVSMYARKGSIENAQCV 515

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+  T+ D++SW+  ++         +A  +F+ +      ++  T ++++       ++
Sbjct: 516 FERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLV 575

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIA 350
             G+Q         G    +     ++ +Y + G++++  S+ + + F    + W +++ 
Sbjct: 576 EEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLG 635

Query: 351 G 351
            
Sbjct: 636 A 636



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK  +   P + T L+  ++K      A         +D+++++A+++  A+  
Sbjct: 377 QIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAG 436

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
               A   F ++   GL+P+ FT SS + AC S    +      H + +K      + + 
Sbjct: 437 DCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVS 496

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  YA+ G I +A+  F    D D +++ +M+ GY  +G   K+ +VF +M   G++
Sbjct: 497 SALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGID 556

Query: 177 LNEFS-LTAVLGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  + L+ ++G +    V+EG+Q     V+   ++   +H    +++LY R G+  + +
Sbjct: 557 MDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHY-ACMVDLYSRAGKLDETM 615

Query: 234 KMFDEITEPDVVSWSERIAAAC 255
            + + +  P   +    +  AC
Sbjct: 616 SLIEGMPFPAGPTIWRALLGAC 637


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 216/674 (32%), Positives = 329/674 (48%), Gaps = 107/674 (15%)

Query: 185 VLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           +L  S  +K+   G  +H   +K G   GV  +L N +M  Y + G    A  +FDE+  
Sbjct: 16  ILQTSVRIKDPFAGRSVHCQIIKKGLHLGV--YLMNNLMTFYAKTGSLRFAHHVFDEMPL 73

Query: 242 PDVVSWSERIA------------------AACD---------GVEAFGLFKDLRF----- 269
               SW+  I+                    CD         G   FGLF +  +     
Sbjct: 74  KSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKM 133

Query: 270 --NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                  +++T+ N+LSS    + L  G++I +F  K+G    V +  +L++MY KCG  
Sbjct: 134 ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDP 193

Query: 328 NDARSIFDYLIFK-------------------------------DSVSWNSMIAGYSENG 356
             A+ +FD +  K                               D VSWNSMI+GYS+ G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253

Query: 357 FFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           +  +AL +F  ML E SL P+ +T+ASIL A +N + L    Q+H++I+++      ++ 
Sbjct: 254 YNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL---------------------- 453
           + LI+ Y K   + E  R++ E ++ + ++I A  S+L                      
Sbjct: 314 NALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372

Query: 454 ------------VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
                       V      +ALEL+R +     E N  T + +L   +++T LE GK IH
Sbjct: 373 DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIH 432

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR-KICRDSLAGWNAMMMGYAQHGCY 560
             A+KA       V +A+I MY K G I  AKR F     +  +  W +M+M  AQHG  
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLG 492

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            E  NLF +M   G+KPD ITY+ VL++C H GLV + R Y + M+++H + P L HYAC
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           ++DL GR GLL+ A + I+ MPI PD   W SLL++C I+ N DL  +A  +LL + P N
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
              Y+ L+N+Y++ G W +  + RK MK++ + KE G SWIH+    H F   D  H Q 
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672

Query: 741 KEIYKELIKLYEHM 754
            EIYK + +++E +
Sbjct: 673 DEIYKLMAEIWEEI 686



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 219/487 (44%), Gaps = 75/487 (15%)

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  YAK G    +     +  D D V++TA++ GY   G FD +  +F +M S  +  +
Sbjct: 82  LISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPS 141

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F+++ VL    A+  +  G +IH F VK+G   G C  +  +++N+Y +CG  + A  +
Sbjct: 142 QFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL--GSCVPVATSLLNMYAKCGDPVIAKVV 199

Query: 236 FDEIT-------------------------------EPDVVSWSERIAAACD---GVEAF 261
           FD +T                               + D+VSW+  I+        +EA 
Sbjct: 200 FDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEAL 259

Query: 262 GLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
            +F K L     + + +T+ ++LS+      L  GKQI A+  +       ++GNALISM
Sbjct: 260 VIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISM 319

Query: 321 YGKC---------------------------------GQVNDARSIFDYLIFKDSVSWNS 347
           Y K                                  G V  AR IF+ L  +D V+W +
Sbjct: 320 YAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTA 379

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI GY +NG +N AL++F  M+     PN YT+A++L   S+   L+   Q+H+  IK+G
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELY 466
                S+ + LI  Y K   +N +KRV    + KK  V   ++   L       EA+ L+
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLF 499

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYCK 525
             +     + +  T+  VL AC  +  +EQG+  + +  +    +      A +ID+Y +
Sbjct: 500 ERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGR 559

Query: 526 CGTIEDA 532
            G +++A
Sbjct: 560 AGLLQEA 566



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 235/500 (47%), Gaps = 88/500 (17%)

Query: 15  PILST----TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           P+ ST    TLIS + K  +F  + R L++  + D +++ A+I G  +F     A+ +F 
Sbjct: 72  PLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           ++  + + P  FT S+++ +C + Q  +I   +H   +KLG  S V + +  +  YAK G
Sbjct: 132 KMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191

Query: 128 EIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEM---------------- 170
           + V A++ F D + + N++ + A++  Y+ +G+F+ +   F +M                
Sbjct: 192 DPVIAKVVF-DRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYS 250

Query: 171 -RSLGLE--------LNE-------FSLTAVLGASFDVKE---GEQIHGF---------- 201
            +   LE        LNE       F+L ++L A  ++++   G+QIH +          
Sbjct: 251 QQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG 310

Query: 202 --------------GVKVGFLSGVCNHLNN-------AIMNLYVRCGQKLDAVKMFDEIT 240
                         GV++  L    N  +N       ++++ Y + G    A ++F+++ 
Sbjct: 311 AVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLR 370

Query: 241 EPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           + DVV+W+  I     +G+  +A  LF+ +     + N YT+  +LS      IL  GKQ
Sbjct: 371 DRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENG 356
           I A   K G     S+ NALI+MY K G +N A+ +FD     K+ VSW SMI   +++G
Sbjct: 431 IHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-----MQVHSHIIKSGFLLD 411
              +A+++F  ML   + P+  T   +L A ++   ++Q      M    H I+      
Sbjct: 491 LGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTL--- 547

Query: 412 DSMISCLITTYGKCNALNES 431
            S  +C+I  YG+   L E+
Sbjct: 548 -SHYACMIDLYGRAGLLQEA 566



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 177/376 (47%), Gaps = 48/376 (12%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRP 79
           LIS + +   F  A        +RDI+++N++ISG ++   +  AL +F + L    L+P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKP 273

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSR---------VYLVSGFIE------ 121
           D FT +S++ AC +L++  I   +H   L+    +          +Y  SG +E      
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333

Query: 122 ------------------NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                              Y K G +  A   F    D D VA+TAM+ GYV NG ++ +
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            E+F  M + G E N ++L A+L  S     ++ G+QIH   +K G  S     + NA++
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESS--TPSVTNALI 451

Query: 221 NLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINE 276
            +Y + G    A ++FD    + ++VSW+  I A      G EA  LF+ +     + + 
Sbjct: 452 AMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDH 511

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFD 335
            T + +LS+     ++  G++      +V  +E  +S    +I +YG+ G + +A    +
Sbjct: 512 ITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIE 571

Query: 336 YL-IFKDSVSWNSMIA 350
            + I  D+++W S++A
Sbjct: 572 SMPIEPDNIAWGSLLA 587



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 131/267 (49%), Gaps = 19/267 (7%)

Query: 1   QIYSLLIKNGH--HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           +I  L++++    +L+ I  T+L+  +TK  + + A       ++RD++ + A+I G  +
Sbjct: 327 EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ 386

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
                 AL+LF  +  +G  P+++T ++++    S   L+  + +H   +K G SS   +
Sbjct: 387 NGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSV 446

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDN-----VAYTAMVCGYVWNGEFDKSKEVFVEM 170
            +  I  YAK+G I  A+  F    DL N     V++T+M+     +G   ++  +F  M
Sbjct: 447 TNALIAMYAKTGNINVAKRVF----DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERM 502

Query: 171 RSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            S+G++ +  +   VL A      V++G + +    +V  +    +H    +++LY R G
Sbjct: 503 LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHY-ACMIDLYGRAG 561

Query: 228 QKLDAVKMFDEIT-EPDVVSWSERIAA 253
              +A    + +  EPD ++W   +A+
Sbjct: 562 LLQEAYLFIESMPIEPDNIAWGSLLAS 588



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 51/239 (21%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F+ +L+    + D   G+++HC  +K      +++ + ++  Y K G++  A   F ++ 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSN--------------------------------LFN 568
             S   WN ++ GYA+ G + EVS                                 +F 
Sbjct: 73  LKSTFSWNTLISGYAKQGNF-EVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFA 131

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI------V 622
           KM    V P + T   VL+SC        A   L     +H  + +L   +C+      +
Sbjct: 132 KMISERVPPSQFTVSNVLSSCA-------ANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           ++  + G    AK+  D+M +  +   W +L+S     G  +L     +   E  PD +
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTV-KNISTWNALISLYMQSGQFEL----AASQFEKMPDRD 238


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 227/768 (29%), Positives = 384/768 (50%), Gaps = 42/768 (5%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPA 65
           I+    +D +   T +  F     F    R +FD   +RD++ +NA++ G   +     A
Sbjct: 86  IQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEA 145

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRVYLVSGFIE 121
           + L   +  + LRP++ T  +L+ AC    E  +   VHG CL+ G F S  ++ +  I 
Sbjct: 146 MLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIG 205

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y +  ++    + F   +  + V++ AM+ GY   G++ K+ E+FV+M    ++ +  +
Sbjct: 206 FYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVT 264

Query: 182 LTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           +   + A  ++   K G+QIH   +K  F+  +  ++ NA++N+Y   G    + ++F+ 
Sbjct: 265 MLVAVQACAELGSLKLGKQIHQLAIKFEFVEDL--YILNALLNMYSNNGSLESSHQLFES 322

Query: 239 ITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI---L 292
           +   D   W+  I+A A  G   EA  LF  ++    + +E T++ +LS    E +   L
Sbjct: 323 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC--EELASGL 380

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK + A   K G     S+GNAL+SMY +   V   + IFD +   D +SWN+MI   
Sbjct: 381 LKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILAL 440

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           + N    QA ++F  M E  + PN YT+ SIL A  +   L     +H +++K    ++ 
Sbjct: 441 ARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQ 500

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + L   Y  C     ++ +      ++ +  NA+                       
Sbjct: 501 PLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXK-------------------- 540

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ--DIFVESAVIDMYCKCGTIE 530
             E N  T   VL +   +  L QG+++H    +  +    D+ + +A I MY +CG+++
Sbjct: 541 -AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQ 599

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A+  F+ + + ++  WNAM+ GY  +G   +    F++M + G +P+ +T+++VL++C 
Sbjct: 600 SAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACS 659

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+G +         M     + P+L HY+CIVDLL R G ++ A+  ID MPI PDA +W
Sbjct: 660 HSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVW 719

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           ++LLS+C  Y +         KL +L+P N   YVLLSN+YA+AG+W +V ++R  +KEK
Sbjct: 720 RALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEK 779

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
            L K PG SWI V    H F AGD SH QS +IY +L  L   M  T 
Sbjct: 780 GLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETG 827



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 157/663 (23%), Positives = 303/663 (45%), Gaps = 43/663 (6%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENE 98
           Q +D   +N++I   A        L  + ++   G+ P+  T   ++KAC +   ++  +
Sbjct: 21  QIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 80

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
            +H           V + +  ++ Y K G +  A   F    D D V + AMV GYV  G
Sbjct: 81  SIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWG 140

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNH 214
            ++++  +  EM    L  N  ++ A+L    GAS +++ G  +HG+ ++ G       H
Sbjct: 141 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGAS-ELRLGRGVHGYCLRNGMFDS-NPH 198

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND 271
           +  A++  Y+R   ++  + +FD +   ++VSW+  I+      D  +A  LF  +  ++
Sbjct: 199 VATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 257

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + +  TM+  + +      L+ GKQI     K  F+E + I NAL++MY   G +  + 
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ +  +D+  WNSMI+ Y+  G   +A+D+F  M    +  +  T+  +L       
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377

Query: 392 S-LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           S L +   +H+H+IKSG  +D S+ + L++ Y + N +   +++   +   + +  N + 
Sbjct: 378 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 437

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
             L   +  A+A EL+  +  S  + N  T   +L AC  +T L+ G++IH   +K   +
Sbjct: 438 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 497

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            +  + +A+ DMY  CG    A+  F       L  WNAM+                   
Sbjct: 498 INQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX------------------ 539

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREART---YLSCMSDLHGLIPQLEHYACIVDLLGR 627
                +P+ +T + VL+S  H   + + ++   Y++      GL   L +    + +  R
Sbjct: 540 ---KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLAN--AFITMYAR 594

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYV 685
            G L+ A+     +P   +   W ++++   + G     +LA S++LE   +P+  +   
Sbjct: 595 CGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVS 653

Query: 686 LLS 688
           +LS
Sbjct: 654 VLS 656



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 45/305 (14%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  ++K+   ++  L T L   +    D   A        +RD+I++NA+I        
Sbjct: 487 IHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX------- 539

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFS--SRVYLV 116
                            P++ T  +++ +     +L + + +H    + GFS    + L 
Sbjct: 540 --------------KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLA 585

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           + FI  YA+ G + SAE  F+     + +++ AM+ GY  NG    +   F +M   G  
Sbjct: 586 NAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFR 645

Query: 177 LNEFSLTAVLGA---SFDVKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            N  +  +VL A   S  ++ G Q     +  F V    +   C      I++L  R G 
Sbjct: 646 PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSC------IVDLLARGGC 699

Query: 229 KLDAVKMFDEIT-EPDVVSWSERIA---AACDGVEAFGLFKDL-RFNDFQINEYTMINLL 283
             +A +  D +  EPD   W   ++   A  D  +A  +F+ L +        Y +++ +
Sbjct: 700 IDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNV 759

Query: 284 SSVGG 288
            +  G
Sbjct: 760 YATAG 764


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 195/639 (30%), Positives = 331/639 (51%), Gaps = 10/639 (1%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
           Y K G++ +A   F +   + +V  +TA++ GY   G+  +   +F +M   G+  + ++
Sbjct: 139 YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT 198

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           ++ VL        +++GE +HG   K+GF S     + NA+M  Y +  +  DA+ +FD 
Sbjct: 199 ISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCA--VGNALMAFYAKSNRTKDAILVFDG 256

Query: 239 ITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   DV+SW+  I+    +G+  +A  LF  +     +++  T++++L +     +L  G
Sbjct: 257 MPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLG 316

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           + +  +  K GF+   S+ N L+ MY  C        IF  ++ K+ VSW +MI  Y+  
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA 376

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G +++   +F  M      P+ + + S L A + ++ LK    VH + I++G     ++ 
Sbjct: 377 GLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT 436

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y KC  + E+K +   +  K+ +  N L       +   EA  L+  +    R 
Sbjct: 437 NALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRP 496

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N  T + +L A A+++ LE+G+ +H  AL+  Y +D FV +A+IDMY KCG +  A+R 
Sbjct: 497 -NAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRL 555

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++   +L  W  M+ GY  HG   +   LF +M   G+ PD  ++ A+L +C H+GL 
Sbjct: 556 FDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLR 615

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            E   +   M   H + P+L+HY C+VDLL   G L+ A   ID MPI PD+ IW SLL 
Sbjct: 616 DEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLR 675

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
            C I+ N+ L      ++ EL+P+N   YVLL+N+YA A  W  V KL+ ++  + L + 
Sbjct: 676 GCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLREN 735

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            G SWI   G  H F A + +H Q   I + L ++ + M
Sbjct: 736 TGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRM 774



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 261/488 (53%), Gaps = 15/488 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFD--TQNRDIITYNALISGLARFCQSGPALKLFD 70
           +D +L   L+  + K  D   A R +FD   Q  D+  + AL+SG A+       + LF 
Sbjct: 127 MDNVLGQKLVLMYLKCGDLENARR-VFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFR 185

Query: 71  RLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
           ++   G+RPDA+T S ++K     GS+++ E+VHG+  KLGF S+  + +  +  YAKS 
Sbjct: 186 KMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
               A + F      D +++ +M+ G   NG +DK+ E+FV M   G EL+  +L +VL 
Sbjct: 246 RTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305

Query: 188 ASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A  ++     G  +HG+ VK GF+S     L N ++++Y  C       K+F  + + +V
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTS--LANVLLDMYSNCSDWRSTNKIFRNMVQKNV 363

Query: 245 VSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  I +        +  GLF+++     + + + + + L +  G  +L+ GK +  +
Sbjct: 364 VSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGY 423

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             + G  +V+++ NAL+ MY KCG + +A+ IFD ++ KD +SWN++I GYS N   N+A
Sbjct: 424 AIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEA 483

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             +F  ML   L PN  TM  IL A ++  SL++  ++H++ ++ G+L DD + + LI  
Sbjct: 484 FSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDM 542

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC AL  ++R+   +  KN +    + +         +A+ L+  +  S    + ++F
Sbjct: 543 YVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASF 602

Query: 482 SIVLKACA 489
           S +L AC+
Sbjct: 603 SAILYACS 610



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 12/398 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ LL K G      +   L++ + K    + A        +RD+I++N++ISG      
Sbjct: 218 VHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGL 277

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              A++LF R+  +G   D+ T  S++ AC  L       +VHG  +K GF S+  L + 
Sbjct: 278 YDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANV 337

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+   +  S    FR+ +  + V++TAM+  Y   G +DK   +F EM   G   +
Sbjct: 338 LLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPD 397

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F++T+ L A      +K G+ +HG+ ++ G    +   + NA+M +YV+CG   +A  +
Sbjct: 398 IFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLA--VTNALMEMYVKCGNMEEAKLI 455

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD +   D++SW+  I          EAF LF ++     + N  TM  +L +      L
Sbjct: 456 FDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSL 514

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+++ A+  + G++E   + NALI MY KCG +  AR +FD L  K+ +SW  M+AGY
Sbjct: 515 ERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGY 574

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +G    A+ +F  M    + P+  + ++IL A S+S
Sbjct: 575 GMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHS 612



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 50/91 (54%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++  ++ G+  D  ++  LI  + K      A R      N+++I++  +++G     
Sbjct: 519 EMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHG 578

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   A+ LF+++R  G+ PDA +FS+++ AC
Sbjct: 579 RGRDAIALFEQMRVSGIAPDAASFSAILYAC 609


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 218/735 (29%), Positives = 381/735 (51%), Gaps = 31/735 (4%)

Query: 46  IITYNALISGLARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKACGSLQENEIVHGV 103
           +  +N L++ L+R  +   AL +  RL     G+ PD FT    +K+C    +   VH V
Sbjct: 30  LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG-DDGRQVHAV 88

Query: 104 CLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
             KLG +    ++ +  +  Y + G +  AE  F      + V++ A++       +  +
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRR 145

Query: 163 SKEVFVE-MRSLG--LELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLN 216
             E+F + +  LG     +E +L  VL   A+    E G  +HG  VK G+       ++
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGW--DAAPRVS 203

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITE---PDVVSWSERIAAACDGVEA---FGLFKDLRFN 270
           N ++++Y +CG+  DA   F E       +VVSW+  +       EA   FGL ++++  
Sbjct: 204 NVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQME 263

Query: 271 DFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQV 327
           +  +  +E TM+++L    G   L   +++ AF  + G  +    + NALI+ YG+CG +
Sbjct: 264 ERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCL 323

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF-SLIPNGYTMASILEA 386
             A  +FD +  K   SWN++I  +++NG  + A+++F  M       P+ +++ S+L A
Sbjct: 324 LHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLA 383

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
             N K L      H  I+++G   D  +   L++ Y +C   + ++ +   +++K+ V  
Sbjct: 384 CGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSW 443

Query: 447 NALASVLVYASCHAEALELYRTIW----GSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
           N + +         E+L+L+R +     G    +  +T ++V  AC+ +  +  GK +HC
Sbjct: 444 NTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALV--ACSELPAVRLGKEMHC 501

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
            ALKA   +D F+ S++IDMY KCG+++DA+  F ++       W  M+ GYA +G   E
Sbjct: 502 FALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKE 561

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              L++KM + G++PD  TYL +L +C HAG++ +   +   M +L  +  +LEHYAC++
Sbjct: 562 AVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVI 621

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
            +L R G    A   ++ MP  PDA I  S+LSAC ++G ++LG     KLLEL+P    
Sbjct: 622 GMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAE 681

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
            YVL SN+YA +  W+++ K+RK +++  + KEPG SWI + G  + F AG++S  +  +
Sbjct: 682 HYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHK 741

Query: 743 IYKELIKLYEHMVAT 757
           + K    L E + A 
Sbjct: 742 VRKMWYSLEEKIRAA 756



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 243/505 (48%), Gaps = 26/505 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF-DRL 72
           DP +  +L+S + +      A +       R+++++NAL++ +A        L+LF D L
Sbjct: 98  DPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRRGLELFRDCL 154

Query: 73  RYQG--LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
              G    PD  T  +++  C +L   E    VHG+ +K G+ +   + +  ++ YAK G
Sbjct: 155 EDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCG 214

Query: 128 EIVSAEMCFRDCLD---LDNVAYTAMVCGYVWNGEFDKSKEVFVEMR--SLGLELNEFSL 182
           E+  AE  F +       + V++  M+ GY  NGE   +  +  EM+    G+  +E ++
Sbjct: 215 EMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITM 274

Query: 183 TAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
            +VL     + E     ++H F V+ G  L+G  + + NA++  Y RCG  L A ++FD 
Sbjct: 275 LSVLPVCSGLPELAKLRELHAFVVRRGLHLTG--DMVPNALIAAYGRCGCLLHACRVFDG 332

Query: 239 ITEPDVVSWSERIAAACDGVEAFG---LFKDLRFNDFQINEYTMI-NLLSSVGGERILRA 294
           I    V SW+  I A     EA     LF+++     Q  ++  I +LL + G  + L  
Sbjct: 333 ICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLH 392

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GK    F  + G  +   I  +L+S+Y +CG+ + AR +FD +  KD VSWN+MIAGYS+
Sbjct: 393 GKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQ 452

Query: 355 NGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           NG   ++L +F  M   +    P+     S L A S   +++   ++H   +K+    D 
Sbjct: 453 NGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDS 512

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S +I  Y KC ++++++     +  K+AV    + +         EA+ LY  +   
Sbjct: 513 FLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGRE 572

Query: 473 CREVNGSTFSIVLKACAAMTDLEQG 497
             E +G T+  +L AC     LE G
Sbjct: 573 GMEPDGFTYLGLLMACGHAGMLEDG 597



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%), Gaps = 32/359 (8%)

Query: 1   QIYSLLIKNGHHLD-PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++++ +++ G HL   ++   LI+ + +      A R      ++ + ++NALI   A+ 
Sbjct: 292 ELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQN 351

Query: 60  CQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
            ++  A++LF  +    G +PD F+  SL+ ACG+L+     +  HG  L+ G     ++
Sbjct: 352 GEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFI 411

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-- 173
               +  Y + G    A + F    + D V++  M+ GY  NG   +S ++F EM+S   
Sbjct: 412 RVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKG 471

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G   +  + T+ L A  +   V+ G+++H F +K        + L+++I+++Y +CG   
Sbjct: 472 GHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCED--SFLSSSIIDMYSKCGSVD 529

Query: 231 DAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA   FD +   D VSW+  I   A    G EA GL+  +     + + +T + LL + G
Sbjct: 530 DARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACG 589

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGN---------ALISMYGKCGQVNDARSIFDYL 337
              +L  G      C+   F E+ ++            +I M  + G+  DA ++ + +
Sbjct: 590 HAGMLEDG-----LCF---FQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVM 640


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 182/564 (32%), Positives = 310/564 (54%), Gaps = 6/564 (1%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           + +Q+H   ++   LS     +   ++++Y       +A+ +F  +  P V++W   I  
Sbjct: 23  QAKQLHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRC 79

Query: 254 ACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
             D      A   F ++R +    +     ++L S      LR G+ +  F  ++G    
Sbjct: 80  FTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           +  GNAL++MY K   ++  R +F+ +  KD VS+N++IAGY+++G +  AL M   M  
Sbjct: 140 LYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGT 199

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             L P+ +T++S+L   S    + +  ++H ++I+ G   D  + S L+  Y K   + +
Sbjct: 200 SDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 259

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S+RV S + +++++  N+L +  V    + EAL L+R +  +        FS V+ ACA 
Sbjct: 260 SERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAH 319

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           +  L  GK +H   L+  + ++IF+ SA++DMY KCG I+ A++ F ++       W A+
Sbjct: 320 LATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAI 379

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           +MG+A HG  HE  +LF +M + GVKP+++ ++AVLT+C H GLV EA  Y + M+ ++G
Sbjct: 380 IMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYG 439

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           L  +LEHYA + DLLGR G LE A   I +M + P   +W +LLS+C+++ N++L     
Sbjct: 440 LNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVA 499

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
            K+  +  +N   YVL+ N+YAS G W ++ KLR  +++K L K+P  SWI +   TH F
Sbjct: 500 EKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGF 559

Query: 731 YAGDSSHSQSKEIYKELIKLYEHM 754
            +GD SH     I + L  + E M
Sbjct: 560 VSGDRSHPSMDRINEFLKAVMEQM 583



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 229/509 (44%), Gaps = 45/509 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  I+    L    ++ +IS +T       A       ++  ++ + ++I       
Sbjct: 26  QLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQS 84

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL  F  +R  G  PD   F S++K+C     L+  E VHG  ++LG    +Y  +
Sbjct: 85  LFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+K   I S    F      D V+Y  ++ GY  +G ++ +  +  EM +  L+ 
Sbjct: 145 ALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKP 204

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+L++VL       DV +G++IHG+ ++ G  S V  ++ ++++++Y +  +  D+ +
Sbjct: 205 DAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDV--YIGSSLVDMYAKSARIEDSER 262

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   D +SW+  +A         EA  LF+ +     +       +++ +      
Sbjct: 263 VFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLAT 322

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ+  +  + GF   + I +AL+ MY KCG +  AR IFD +   D VSW ++I G
Sbjct: 323 LHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG 382

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           ++ +G  ++A+ +F  M    + PN     ++L A S+   + +A               
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA--------------- 427

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
                     +G  N++ +   +  E++     H  A+A +L  A    EA   Y  I  
Sbjct: 428 ----------WGYFNSMTKVYGLNQELE-----HYAAVADLLGRAGKLEEA---YDFISK 469

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAI 500
              E  GS +S +L +C+   +LE  + +
Sbjct: 470 MRVEPTGSVWSTLLSSCSVHKNLELAEKV 498



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 192/416 (46%), Gaps = 54/416 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFA---DFRRAFRFLFDTQNRDIITYNALISGLAR 58
           ++  +++ G   D      L++ ++K       R+ F  +     +D+++YN +I+G A+
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELM---PRKDVVSYNTVIAGYAQ 183

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVY 114
                 AL++   +    L+PDAFT SS++         L+  EI HG  ++ G  S VY
Sbjct: 184 SGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEI-HGYVIRKGIDSDVY 242

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  ++ YAKS  I  +E  F      D++++ ++V GYV NG ++++  +F +M S  
Sbjct: 243 IGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAK 302

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +     + ++V+ A   +     G+Q+HG+ ++ GF  G    + +A++++Y +CG    
Sbjct: 303 VRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF--GRNIFIASALVDMYSKCGNIQA 360

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FD +   D VSW+  I   A    G EA  LF++++    + N+   + +L++   
Sbjct: 361 ARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA--- 417

Query: 289 ERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                        C  VG + E     N++  +YG   ++    ++ D L          
Sbjct: 418 -------------CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL---------- 454

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
                   G   +A D    M    + P G   +++L + S  K+L+ A +V   I
Sbjct: 455 -----GRAGKLEEAYDFISKM---RVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 502


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 180/516 (34%), Positives = 295/516 (57%), Gaps = 3/516 (0%)

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           AV +F +I EPD  +++  I          EA  LFK++  N  Q +E+T   +L     
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + L  G+QI A   K GF     + N LI MY  CG+V  AR +FD +  ++  +WNSM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            AGY+++G + + + +F  MLE  +  +  T+ S+L A      L+    ++ ++ + G 
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             + ++I+ L+  Y KC  ++ ++R+  ++D+++ V  +A+ S    AS   EAL+L+  
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +  + N  T   +L +CA +  LE GK +H    K R    + + +A++D Y KCG+
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +E +   F K+   ++  W  ++ G A +G   +    F  M +  V+P+++T++ VL++
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGLV E R     MS   G+ P++EHY C+VD+LGR GL+E A   I  MPI P+A 
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW++LL++C ++ N+++G  +  +L+ L+P +   Y+LLSN+YAS G W D  K+R EMK
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           EK + K PG S I + G  H F+A D+ HSQS+EIY
Sbjct: 557 EKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIY 592



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 219/470 (46%), Gaps = 18/470 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKF--ADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           +I++ LIK    L P ++  L+             A          D   YN +I G   
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
                 A+ LF  +    ++PD FTF  ++K C  LQ   E E +H + +K GF S  ++
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFV 161

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I  YA  GE+  A   F +  + +   + +M  GY  +G +++  ++F EM  L +
Sbjct: 162 KNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDI 221

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +E +L +VL   G   D++ GE I+ +  + G        L  +++++Y +CGQ   A
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPT--LITSLVDMYAKCGQVDTA 279

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD++   DVV+WS  I+    A    EA  LF +++  +   NE TM+++LSS    
Sbjct: 280 RRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVL 339

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GK +  F  K      V++G AL+  Y KCG V  +  +F  +  K+ +SW  +I
Sbjct: 340 GALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLI 399

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
            G + NG   +AL+ F  MLE ++ PN  T   +L A S++  + +   +   + +  G 
Sbjct: 400 QGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGI 459

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
                   C++   G+   + E+ + +    K   +  NA+    + ASC
Sbjct: 460 EPRIEHYGCMVDILGRAGLIEEAFQFI----KNMPIQPNAVIWRTLLASC 505



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 230/460 (50%), Gaps = 21/460 (4%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV------SAEMCFRDCL 140
           +++ C ++++   +H   +K    +R+ L     EN  +S  I+       A   FR   
Sbjct: 30  ILEQCKTIRDLNEIHAHLIK----TRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID 85

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQ 197
           + D+ AY  M+ G+       ++  +F EM    ++ +EF+   +L     ++   EGEQ
Sbjct: 86  EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQ 145

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---A 254
           IH   +K GF  G    + N ++++Y  CG+   A ++FDE++E +V +W+   A    +
Sbjct: 146 IHALIMKCGF--GSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKS 203

Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            +  E   LF ++   D + +E T++++L++ G    L  G+ I  +  + G     ++ 
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +L+ MY KCGQV+ AR +FD +  +D V+W++MI+GYS+     +ALD+F  M + ++ 
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN  TM SIL + +   +L+    VH  I K    L  ++ + L+  Y KC ++  S  V
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             ++  KN +    L   L       +ALE +  +     E N  TF  VL AC+    +
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443

Query: 495 EQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           ++G+ +  +++   +  +  +E    ++D+  + G IE+A
Sbjct: 444 DEGRDLF-VSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA 482



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 23/205 (11%)

Query: 482 SIVLKACAAMTDLEQGKAIHC------LALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           +++L+ C  + DL +   IH       L LK +  +++ +ESA I +     +++ A   
Sbjct: 28  TLILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENL-LESAAILLPT---SMDYAVSI 80

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           FR+I       +N M+ G+      HE   LF +M +  V+PDE T+  +L  C     +
Sbjct: 81  FRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQAL 140

Query: 596 REART----YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            E        + C    HG +        ++ +    G +E A+   D+M    +   W 
Sbjct: 141 SEGEQIHALIMKCGFGSHGFVKN-----TLIHMYANCGEVEVARRVFDEMS-ERNVRTWN 194

Query: 652 SLLSACTIYGNIDLGLLAGSKLLEL 676
           S+ +  T  GN +  +    ++LEL
Sbjct: 195 SMFAGYTKSGNWEEVVKLFHEMLEL 219


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 223/760 (29%), Positives = 379/760 (49%), Gaps = 19/760 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L  + G   +  + T L+  +        A R  ++   R+++++ A++  L+    
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVS 117
              AL  + R+R +G+  +A   +++V  CG+L E+E+    V    +  G  + V + +
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGAL-EDEVAGLQVTAHVVVSGLLTHVSVAN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +     +  AE  F    + D +++ AM+  Y     + K   V  +MR   ++ 
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKP 244

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +     SL +V  +S  V  G  IH   V  G    V   L NA++N+Y   G+  +A  
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSV--PLINALVNMYSTAGKLDEAES 302

Query: 235 MFDEITEPDVVSWSERIAA-----AC-DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           +F  ++  DV+SW+  I++     +C + +E  G    L+ ++   N  T  + L +   
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL--LQTDEGPPNSMTFSSALGACSS 360

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+ I A   +     V+ IGN+L++MY KC  + D   +F+ +   D VS N +
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSG 407
             GY+       A+ +F  M    + PN  TM ++     +   L    M +H+++ ++G
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG 480

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            L D+ + + LIT Y  C  L  S  + S I+ K+ +  NA+ +  V      EA++L+ 
Sbjct: 481 LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFM 540

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
               +  +++    +  L + A +  LE+G  +H L++K   D D  V +A +DMY KCG
Sbjct: 541 DSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCG 600

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++   +            WN ++ GYA++G + E  + F  M   G KPD +T++A+L+
Sbjct: 601 KMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLS 660

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAGL+ +   Y + M+   G+ P ++H  CIVDLLGR+G    A+  ID+MP+ P+ 
Sbjct: 661 ACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPND 720

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW+SLLS+   + N+D+G  A   LLEL P ++S YVLLSNLYA+   W DV KLR  M
Sbjct: 721 LIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHM 780

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           K   L K P  SW+ +      F  GD SH  +++IY +L
Sbjct: 781 KTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKL 820



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/638 (23%), Positives = 284/638 (44%), Gaps = 28/638 (4%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---- 98
           +R   ++   +SG AR      A  L   +R + +    F  +SLV AC      E    
Sbjct: 3   HRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAAC 62

Query: 99  --IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +H +  + G    VY+ +  +  Y   G +++A+  F +    + V++TA++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
           NG  +++   +  MR  G+  N  +L  V+   GA  D   G Q+    V  G L+ V  
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV-- 180

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS--------ERIAAACDGVEAFGLFK 265
            + N+++ ++    +  DA ++FD + E D +SW+        E + + C     F +  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKC-----FIVLS 235

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           D+R  + + +  T+ +L+S      ++  G  I + C   G    V + NAL++MY   G
Sbjct: 236 DMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAG 295

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASIL 384
           ++++A S+F  +  +D +SWN+MI+ Y ++    +AL+    +L+     PN  T +S L
Sbjct: 296 KLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSAL 355

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A S+ ++L     +H+ I++        + + L+T Y KCN++ +++RV   +   + V
Sbjct: 356 GACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVV 415

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ-GKAIHCL 503
             N L          A A+ ++  + G+  + N  T   +   C ++ DL   G  +H  
Sbjct: 416 SCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAY 475

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
             +     D ++ +++I MY  CG +E +   F +I   S+  WNA++    +HG   E 
Sbjct: 476 VTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEA 535

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
             LF      G K D       L+S  +   + E    L  +S  +GL          +D
Sbjct: 536 IKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEG-MQLHGLSVKNGLDCDSHVVNATMD 594

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           + G+ G ++    T+   P       W +L+S    YG
Sbjct: 595 MYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYG 631



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 231/508 (45%), Gaps = 13/508 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ + ++ +G      ++ +LI+ F      + A R     + RD I++NA+IS  +   
Sbjct: 166 QVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEE 225

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
                  +   +R+  ++PD  T  SLV  C S   +     +H +C+  G    V L++
Sbjct: 226 VYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN 285

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSLGLE 176
             +  Y+ +G++  AE  FR+    D +++  M+  YV +    ++ E   + +++    
Sbjct: 286 ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGP 345

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  + ++ LGA    +    G  IH   ++    + +   + N+++ +Y +C    D  
Sbjct: 346 PNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLL--IGNSLLTMYSKCNSMEDTE 403

Query: 234 KMFDEITEPDVVS---WSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ +   DVVS    +   AA  D   A  +F  +R    + N  TMINL  +     
Sbjct: 404 RVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463

Query: 291 ILRA-GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            L + G  + A+  + G +    I N+LI+MY  CG +  +  IF  +  K  +SWN++I
Sbjct: 464 DLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAII 523

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A    +G   +A+ +F          + + +A  L + +N  SL++ MQ+H   +K+G  
Sbjct: 524 AANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLD 583

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  +++  +  YGKC  ++   + L +   +     N L S         EA + ++ +
Sbjct: 584 CDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHM 643

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG 497
               ++ +  TF  +L AC+    +++G
Sbjct: 644 VSVGQKPDYVTFVALLSACSHAGLIDKG 671


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 223/760 (29%), Positives = 379/760 (49%), Gaps = 19/760 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L  + G   +  + T L+  +        A R  ++   R+++++ A++  L+    
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVS 117
              AL  + R+R +G+  +A   +++V  CG+L E+E+    V    +  G  + V + +
Sbjct: 126 MEEALVAYRRMRKEGVMCNANALATVVSLCGAL-EDEVAGLQVTAHVVVSGLLTHVSVAN 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  +     +  AE  F    + D +++ AM+  Y     + K   V  +MR   ++ 
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKP 244

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +     SL +V  +S  V  G  IH   V  G    V   L NA++N+Y   G+  +A  
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSV--PLINALVNMYSTAGKLDEAES 302

Query: 235 MFDEITEPDVVSWSERIAA-----AC-DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           +F  ++  DV+SW+  I++     +C + +E  G    L+ ++   N  T  + L +   
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL--LQTDEGPPNSMTFSSALGACSS 360

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+ I A   +     V+ IGN+L++MY KC  + D   +F+ +   D VS N +
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-AMQVHSHIIKSG 407
             GY+       A+ +F  M    + PN  TM ++     +   L    M +H+++ ++G
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG 480

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            L D+ + + LIT Y  C  L  S  + S I+ K+ +  NA+ +  V      EA++L+ 
Sbjct: 481 LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFM 540

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
               +  +++    +  L + A +  LE+G  +H L++K   D D  V +A +DMY KCG
Sbjct: 541 DSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCG 600

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++   +            WN ++ GYA++G + E  + F  M   G KPD +T++A+L+
Sbjct: 601 KMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLS 660

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAGL+ +   Y + M+   G+ P ++H  CIVDLLGR+G    A+  ID+MP+ P+ 
Sbjct: 661 ACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPND 720

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW+SLLS+   + N+D+G  A   LLEL P ++S YVLLSNLYA+   W DV KLR  M
Sbjct: 721 LIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHM 780

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           K   L K P  SW+ +      F  GD SH  +++IY +L
Sbjct: 781 KTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKL 820



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/638 (23%), Positives = 284/638 (44%), Gaps = 28/638 (4%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---- 98
           +R   ++   +SG AR      A  L   +R + +    F  +SLV AC      E    
Sbjct: 3   HRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAAC 62

Query: 99  --IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +H +  + G    VY+ +  +  Y   G +++A+  F +    + V++TA++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
           NG  +++   +  MR  G+  N  +L  V+   GA  D   G Q+    V  G L+ V  
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV-- 180

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS--------ERIAAACDGVEAFGLFK 265
            + N+++ ++    +  DA ++FD + E D +SW+        E + + C     F +  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKC-----FIVLS 235

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           D+R  + + +  T+ +L+S      ++  G  I + C   G    V + NAL++MY   G
Sbjct: 236 DMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAG 295

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASIL 384
           ++++A S+F  +  +D +SWN+MI+ Y ++    +AL+    +L+     PN  T +S L
Sbjct: 296 KLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSAL 355

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A S+ ++L     +H+ I++        + + L+T Y KCN++ +++RV   +   + V
Sbjct: 356 GACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVV 415

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ-GKAIHCL 503
             N L          A A+ ++  + G+  + N  T   +   C ++ DL   G  +H  
Sbjct: 416 SCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAY 475

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
             +     D ++ +++I MY  CG +E +   F +I   S+  WNA++    +HG   E 
Sbjct: 476 VTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEA 535

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
             LF      G K D       L+S  +   + E    L  +S  +GL          +D
Sbjct: 536 IKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEG-MQLHGLSVKNGLDCDSHVVNATMD 594

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           + G+ G ++    T+   P       W +L+S    YG
Sbjct: 595 MYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYG 631



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L +KNG   D  +    +  + K        + L D  +R    +N LISG AR+ 
Sbjct: 572 QLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYG 631

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A   F  +   G +PD  TF +L+ AC
Sbjct: 632 YFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 193/551 (35%), Positives = 294/551 (53%), Gaps = 35/551 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I +P+   W+  I   + +   V A   +  +     + N YT   LL S   
Sbjct: 85  ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAK 144

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV--------------------- 327
               + GKQI     K+G      +  +LI+MY + G++                     
Sbjct: 145 VGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTAL 204

Query: 328 ----------NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                     +DAR +F+ +  +D+VSWN+MIAGY+++G F +AL  F  M   ++ PN 
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNE 264

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM ++L A + S SL+    V S I   G   +  +++ LI  Y KC  L++++ +   
Sbjct: 265 STMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEG 324

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           I +K+ +  N +     + + + EAL L+R +  S  E N  TF  +L ACA +  L+ G
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 498 KAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           K IH    K      +  + +++IDMY KCG IE AK+ F  +   SL  WNAM+ G A 
Sbjct: 385 KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAM 444

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           HG  +    LF +M   G +PD+IT++ VL++C HAGLV   R   S M + + + P+L+
Sbjct: 445 HGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ 504

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY C++DLLGR GL + A+  +  M + PD  IW SLL AC ++GN++LG  A   L EL
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
           +P+N   YVLLSN+YA+AG W+DV ++R ++ +K + K PG S I V    H F  GD  
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKV 624

Query: 737 HSQSKEIYKEL 747
           H QS++IYK L
Sbjct: 625 HEQSQDIYKML 635



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 60/492 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI+S +IK G H      + LI     + F +   A       +  +   +N +I G + 
Sbjct: 50  QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
                 A+  + R+   G+ P+++TF  L+K+C   G+ QE + +HG  LKLG  S  ++
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFV 169

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV-------------------- 155
            +  I  YA++GE+  AE+ F      D V++TA++ GY                     
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDA 229

Query: 156 --WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGF 201
             WN         G F+++   F EM+   +  NE ++  VL A   S  ++ G  +  +
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
               G  S +   L NA++++Y +CG    A  +F+ I E D++SW+  I          
Sbjct: 290 IEDHGLGSNL--RLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIGNA 316
           EA  LF+ ++ ++ + N+ T +++L +      L  GK I A+  K  +G     S+  +
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTS 406

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI MY KCG +  A+ +F  +  K   SWN+MI+G + +G  N AL++F  M +    P+
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-------CLITTYGKCNALN 429
             T   +L A S++  ++   Q  S ++      +D  IS       C+I   G+    +
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMV------EDYDISPKLQHYGCMIDLLGRAGLFD 520

Query: 430 ESKRVLSEIDKK 441
           E++ ++  ++ K
Sbjct: 521 EAEALMKNMEMK 532



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 236/518 (45%), Gaps = 50/518 (9%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS--GEIVSAEMCFRDCLDLD 143
           +L+  C S Q  + +H   +K G  +  + +S  IE  A S  G +  A + F      +
Sbjct: 37  TLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPN 96

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHG 200
              +  M+ G   +     + + +V M   G+E N ++   +L +   V   +EG+QIHG
Sbjct: 97  QFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQ----KL-------------------------- 230
             +K+G  S    H   +++N+Y + G+    +L                          
Sbjct: 157 HVLKLGLESDPFVH--TSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 231 -DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA ++F+EI   D VSW+  IA         EA   F++++  +   NE TM+ +LS+ 
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G  ++++    G    + + NALI MY KCG ++ AR +F+ +  KD +SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            MI GYS    + +AL +F  M + ++ PN  T  SIL A +   +L     +H++I K 
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 407 GF-LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
              L + S+ + LI  Y KC  +  +K+V + +  K+    NA+ S L        ALEL
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVID 521
           +R +     E +  TF  VL AC+    +E G+   C +     D DI  +      +ID
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGR--QCFSSMVE-DYDISPKLQHYGCMID 511

Query: 522 MYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           +  + G  ++A+   + +  +   A W +++     HG
Sbjct: 512 LLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 162/403 (40%), Gaps = 80/403 (19%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSG-----FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           L  +S  KS +   Q+HS IIK+G     F L   +  C I+ +G    L+ +  +   I
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---LSYALLLFESI 92

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           ++ N    N +      +S    A++ Y  +     E N  TF  +LK+CA +   ++GK
Sbjct: 93  EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGT------------------------------ 528
            IH   LK   + D FV +++I+MY + G                               
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212

Query: 529 -IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++DA+R F +I       WNAM+ GYAQ G + E    F +M +  V P+E T + VL+
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK------------ 635
           +C  +G +       S + D HGL   L     ++D+  + G L+ A+            
Sbjct: 273 ACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331

Query: 636 ----------------------MTIDQMPIPPDAHIWQSLLSACTIYGNIDLG----LLA 669
                                   + Q  + P+   + S+L AC   G +DLG       
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
             K L L   N S +  L ++YA  G      ++   MK K L
Sbjct: 392 DKKFLGLT--NTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 211/721 (29%), Positives = 365/721 (50%), Gaps = 59/721 (8%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR-YQGLRP 79
           ++S F K  + + A R       R+ ++ N +I+ + +      AL  +D +  Y+ ++P
Sbjct: 77  ILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKP 136

Query: 80  DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
              TF+++  ACG L++       HG+ LK+GF S +Y+ +  +  Y K G    A   F
Sbjct: 137 SHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVF 196

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL-----GASFD 191
              ++ + V +T M+ G     +  +  E+F  M   G+ ++  SL+ +L     G SF 
Sbjct: 197 EGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFG 256

Query: 192 V----------KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           V           +G+QIH   VK GF   +  HL N+++++Y + G    A  +F+ + +
Sbjct: 257 VCDDSRGLSTNAQGKQIHTLAVKHGFERDL--HLCNSLLDMYAKTGDMDSAENVFENLDK 314

Query: 242 PDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
             VVSW+  I+     CD  +A   F+ ++   ++ ++ T IN+L++             
Sbjct: 315 HSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTA------------- 361

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
              C K G ++V                    R IFD +     +SWN++++GY+++   
Sbjct: 362 ---CVKSGDVKV-------------------GRQIFDCMSSPSLISWNAILSGYNQSADH 399

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +A+++F  M      P+  T+A IL + +    L+   QVH+   K GF  D  + S L
Sbjct: 400 GEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSL 459

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y KC  +  SK V S++ + + V  N++ +     S   +AL  ++ +       + 
Sbjct: 460 INVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSE 519

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            +F+ +  +CA ++ L QG+ IH   +K  Y  ++FV S++++MYCKCG +  A+  F  
Sbjct: 520 FSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDM 579

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +   ++  WN M+ GYA +G   E  +L+  M   G KPD+IT++AVLT+C H+ LV E 
Sbjct: 580 MPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEG 639

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
               S M     ++P+L+HY CI+D LGRVG     ++ +D MP   D  +W+ +LS+C 
Sbjct: 640 VEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCR 699

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++ N+ L   A  +L  L P N + YVLL+N+Y+S G W+D   +R  M +  + K+PGY
Sbjct: 700 VHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGY 759

Query: 719 S 719
           S
Sbjct: 760 S 760



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 175/734 (23%), Positives = 321/734 (43%), Gaps = 110/734 (14%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L++K G   +  +S  L+  +TK      AFR        + +T+  ++ GL++  Q 
Sbjct: 161 HGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQV 220

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG---------------SLQENEIVHGVCLKL 107
              L+LF  +  +G+  D+ + S+++  C                +  + + +H + +K 
Sbjct: 221 KEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKH 280

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           GF   ++L +  ++ YAK+G++ SAE  F +      V++  M+ GY    + +K+ E F
Sbjct: 281 GFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECF 340

Query: 168 VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
             M+  G E ++ +   +L A   VK G+      VKVG                     
Sbjct: 341 QRMQCCGYEPDDVTYINMLTAC--VKSGD------VKVG--------------------- 371

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
                 ++FD ++ P ++SW+  ++    + D  EA  LF+ ++F     +  T+  +LS
Sbjct: 372 -----RQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILS 426

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S     +L AGKQ+ A   K+GF + V + ++LI++Y KCG++  ++ +F  L   D V 
Sbjct: 427 SCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVC 486

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WNSMIAG+S N     AL  F  M +F   P+ ++ A+I  + +   SL Q  Q+H+ II
Sbjct: 487 WNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQII 546

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G++ +  + S L+  Y KC  +  ++     +  KN V  N +     +     EA+ 
Sbjct: 547 KDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVS 606

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           LY+ +  S  + +  TF  VL AC+    +++G  I    L+                  
Sbjct: 607 LYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQ------------------ 648

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
                      F  + +  L  +  ++    + G ++EV  + + M     K D I +  
Sbjct: 649 ----------KFEVVPK--LDHYTCIIDCLGRVGRFNEVEVILDTMP---YKDDTIVWEV 693

Query: 585 VLTSC-CHAGLVREARTYLSCMSDLHGLIPQ-LEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           VL+SC  HA +    R       +LH L P+    Y  + ++   +G  +          
Sbjct: 694 VLSSCRVHANVSLAKRA----AEELHRLNPRNSAPYVLLANMYSSMGRWD---------- 739

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
              DA + + L+S   I+ +       G    E + D ++     +N+Y+  G  +D   
Sbjct: 740 ---DAQVVRDLMSDNQIHKD------PGYSRSEFKYDVQNKTSFFANMYSCFGNLDDAQF 790

Query: 703 LRKEMKEKFLCKEP 716
           +R    +K   K+P
Sbjct: 791 VRDLTSDKQFYKDP 804



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 231/470 (49%), Gaps = 47/470 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K+G   D  L  +L+  + K  D   A     +     ++++N +ISG    C
Sbjct: 272 QIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRC 331

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
            S  AL+ F R++  G  PD  T+ +++ AC                             
Sbjct: 332 DSEKALECFQRMQCCGYEPDDVTYINMLTAC----------------------------- 362

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
               KSG++      F DC+   + +++ A++ GY  + +  ++ E+F +M+      + 
Sbjct: 363 ---VKSGDVKVGRQIF-DCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDR 418

Query: 180 FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +L  +L +  +   ++ G+Q+H    K+GF   V  ++ ++++N+Y +CG+   +  +F
Sbjct: 419 TTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDV--YVASSLINVYSKCGKMEVSKHVF 476

Query: 237 DEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            +++E DVV W+  IA  + + +E  A   FK +R   F  +E++   + SS      L 
Sbjct: 477 SKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLF 536

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+QI A   K G+++ V +G++L+ MY KCG V  AR  FD +  K+ V+WN MI GY+
Sbjct: 537 QGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYA 596

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD- 412
            NG+  +A+ ++  M+     P+  T  ++L A S+S  + + +++ S +++   ++   
Sbjct: 597 HNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKL 656

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
              +C+I   G+    NE + +L  +  K+    + +   +V +SC   A
Sbjct: 657 DHYTCIIDCLGRVGRFNEVEVILDTMPYKD----DTIVWEVVLSSCRVHA 702



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 195/447 (43%), Gaps = 57/447 (12%)

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           ++    +INLL S    + L + K I A  ++        + N LI +Y KC Q+  A  
Sbjct: 2   EVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHH 61

Query: 333 IFDYL----IF---------------------------KDSVSWNSMIAGYSENGFFNQA 361
           +FD +    IF                           +++VS N++I    +NG+  QA
Sbjct: 62  VFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQA 121

Query: 362 LDMFCHMLEF-SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           LD +  M+ + S+ P+  T A++  A    K +    + H  ++K GF  +  + + L+ 
Sbjct: 122 LDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLC 181

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y KC    ++ RV   I + N V    +   L   +   E LEL+R +      V+  +
Sbjct: 182 MYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVS 241

Query: 481 FSIVLKACA------------AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
            S +L  CA             ++   QGK IH LA+K  +++D+ + ++++DMY K G 
Sbjct: 242 LSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGD 301

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++ A+  F  + + S+  WN M+ GY       +    F +M   G +PD++TY+ +LT+
Sbjct: 302 MDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTA 361

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP---P 645
           C  +G V+  R    CMS      P L  +  I+    +      A     +M      P
Sbjct: 362 CVKSGDVKVGRQIFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNP 416

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSK 672
           D      +LS+C      +LGLL   K
Sbjct: 417 DRTTLAIILSSCA-----ELGLLEAGK 438



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/496 (22%), Positives = 208/496 (41%), Gaps = 88/496 (17%)

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC--------------- 255
           +CNHL    ++LY +C Q   A  +FD+I   ++ S++  ++A C               
Sbjct: 42  LCNHL----IDLYSKCNQITSAHHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQM 97

Query: 256 -----------------DGVEAFGLFK-DLR--FNDFQINEYTMINLLSSVGGERILRAG 295
                            +G E   L   DL   +   + +  T   + S+ GG + +  G
Sbjct: 98  PERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCG 157

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           ++      KVGF   + + NAL+ MY KCG   DA  +F+ ++  + V++ +M+ G S+ 
Sbjct: 158 RRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQT 217

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASIL----EAVS-----NSKSLK---QAMQVHSHI 403
               + L++F  ML   +  +  ++++IL    + VS     +S+ L    Q  Q+H+  
Sbjct: 218 NQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLA 277

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +K GF  D  + + L+  Y K   ++ ++ V   +DK + V  N + S         +AL
Sbjct: 278 VKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKAL 337

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           E ++ +     E +  T+  +L AC    D++ G+ I                       
Sbjct: 338 ECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI----------------------- 374

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
                       F  +   SL  WNA++ GY Q   + E   LF KM      PD  T  
Sbjct: 375 ------------FDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLA 422

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            +L+SC   GL+ EA   +  +S   G    +   + ++++  + G +E +K    ++  
Sbjct: 423 IILSSCAELGLL-EAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLS- 480

Query: 644 PPDAHIWQSLLSACTI 659
             D   W S+++  +I
Sbjct: 481 ELDVVCWNSMIAGFSI 496


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 195/642 (30%), Positives = 350/642 (54%), Gaps = 9/642 (1%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y KSG +  A   F   ++   V +T ++ GY    +F ++ E+FV+M+  G E + 
Sbjct: 90  ISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDY 149

Query: 180 FSLTAVLGASFDVKEGEQIHGFG---VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +   +L      + G QI       +K+G+ S +   + N +++ Y +  +   A ++F
Sbjct: 150 VTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI--VGNTLVDSYCKSNRLDLACQLF 207

Query: 237 DEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            E+ E D VS++  I   + DG++  A  LF +++ +  +  E+T   +L +  G   + 
Sbjct: 208 KEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIV 267

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+QI +F  K  F+  V + NAL+  Y K   V DAR +FD +  +D VS+N +I+GY+
Sbjct: 268 LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 327

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +G    A D+F  +   +     +  A++L   SN+   +   Q+H+  I +    +  
Sbjct: 328 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L+  Y KC    E++ + + +  ++AV   A+ S  V    + E L+L+  +  + 
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              + +TF+ +L+A A++  L  GK +H   +K+ +  ++F  SA++D+Y KCG+I+DA 
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           + F+++   ++  WNAM+  YAQ+G        F +M   G++PD +++L VL++C H+G
Sbjct: 508 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV E   + + M+ ++ L P+ EHYA +VD+L R G    A+  + +MPI PD  +W S+
Sbjct: 568 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSV 627

Query: 654 LSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           L+AC I+ N +L   A  +L  ++   + + YV +SN+YA+AG W +V K+ K M+++ +
Sbjct: 628 LNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 687

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K P YSW+ +   TH F A D  H Q +EI K++  L + M
Sbjct: 688 KKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM 729



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 185/623 (29%), Positives = 310/623 (49%), Gaps = 53/623 (8%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGP 64
           L +   H + + +  +IS + K  +   A R LFD    R  +T+  LI G ++  Q   
Sbjct: 74  LFEKMPHKNTVSTNMMISGYVKSGNLGEA-RKLFDGMVERTAVTWTILIGGYSQLNQFKE 132

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC-GSLQENEI--VHGVCLKLGFSSRVYLVSGFIE 121
           A +LF +++  G  PD  TF +L+  C G    N+I  V    +KLG+ SR+ + +  ++
Sbjct: 133 AFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVD 192

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
           +Y KS  +  A   F++  ++D+V+Y AM+ GY  +G  +K+  +FVEM++ GL+  EF+
Sbjct: 193 SYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFT 252

Query: 182 LTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             AVL A+    D+  G+QIH F +K  F+  V   ++NA+++ Y +    +DA K+FDE
Sbjct: 253 FAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNV--FVSNALLDFYSKHDSVIDARKLFDE 310

Query: 239 ITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + E D VS++  I+  A DG    AF LF++L+F  F   ++    +LS          G
Sbjct: 311 MPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG 370

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A          + +GN+L+ MY KCG+  +A  IF  L  + +V W +MI+ Y + 
Sbjct: 371 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 430

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           GF+ + L +F  M + S+I +  T AS+L A ++  SL    Q+HS IIKSGF+ +    
Sbjct: 431 GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG 490

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S L+  Y KC ++ ++ +   E+  +N V  NA+ S           L+ ++ +  S  +
Sbjct: 491 SALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQ 550

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
            +  +F  VL AC+    +E+G   H  ++   Y  D   E  ++V+DM C+ G   +A+
Sbjct: 551 PDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 609

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---C 590
           +                                   M++  + PDEI + +VL +C    
Sbjct: 610 KL----------------------------------MAEMPIDPDEIMWSSVLNACRIHK 635

Query: 591 HAGLVREARTYLSCMSDLHGLIP 613
           +  L R A   L  M +L    P
Sbjct: 636 NQELARRAADQLFNMEELRDAAP 658



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 223/451 (49%), Gaps = 18/451 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ + +IK G+    I+  TL+  + K      A +   +    D ++YNA+I+G ++  
Sbjct: 170 QVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDG 229

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIV-----HGVCLKLGFSSRVYL 115
               A+ LF  ++  GL+P  FTF++++  C ++  ++IV     H   +K  F   V++
Sbjct: 230 LDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVFV 287

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  ++ Y+K   ++ A   F +  + D V+Y  ++ GY W+G+   + ++F E++    
Sbjct: 288 SNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAF 347

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +  +F    +L     + D + G QIH   +     S +   + N+++++Y +CG+  +A
Sbjct: 348 DRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL--VGNSLVDMYAKCGKFEEA 405

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F  +T    V W+  I+A        E   LF  +R      ++ T  +LL +    
Sbjct: 406 EMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASI 465

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GKQ+ +F  K GFM  V  G+AL+ +Y KCG + DA   F  +  ++ VSWN+MI
Sbjct: 466 ASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMI 525

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y++NG     L  F  M+   L P+  +   +L A S+S  +++ +  H + +   + 
Sbjct: 526 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLW-HFNSMTQIYK 584

Query: 410 LDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           LD      + ++    +    NE++++++E+
Sbjct: 585 LDPRREHYASVVDMLCRSGRFNEAEKLMAEM 615



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 183/416 (43%), Gaps = 47/416 (11%)

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I A   K GF    S  N  +  + K G+++ AR +F+ +  K++VS N MI+GY ++G 
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 358 -------------------------------FNQALDMFCHMLEFSLIPNGYTMASILEA 386
                                          F +A ++F  M      P+  T  ++L  
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAV 444
            +  +   Q  QV + IIK G+  D  +I  + L+ +Y K N L+ + ++  E+ + ++V
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGY--DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSV 216

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             NA+ +         +A+ L+  +  S  +    TF+ VL A   + D+  G+ IH   
Sbjct: 217 SYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFV 276

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K  +  ++FV +A++D Y K  ++ DA++ F ++       +N ++ GYA  G +    
Sbjct: 277 IKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 336

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHA-----GLVREARTYLSCMSDLHGLIPQLEHYA 619
           +LF ++        +  +  +L+   +      G    A+T ++  +D   L+       
Sbjct: 337 DLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT-ADSEILVGN----- 390

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
            +VD+  + G  E A+M    +     A  W +++SA    G  + GL   +K+ +
Sbjct: 391 SLVDMYAKCGKFEEAEMIFTNL-THRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 445



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 15/161 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +IK+G   +    + L+  + K    + A +   +  +R+I+++NA+IS  A+  
Sbjct: 473 QLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNG 532

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           ++   LK F  +   GL+PD+ +F  ++ AC    L E  + H   +     +++Y +  
Sbjct: 533 EAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSM-----TQIYKLDP 587

Query: 119 FIENYA-------KSGEIVSAEMCFRDC-LDLDNVAYTAMV 151
             E+YA       +SG    AE    +  +D D + +++++
Sbjct: 588 RREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 201/613 (32%), Positives = 316/613 (51%), Gaps = 36/613 (5%)

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI-MNLYVRCGQKLDAVKM 235
           L E     +L     ++  +QIH   +K G L      L+  I  +   R G    A+ +
Sbjct: 27  LQEHPSLKLLSKCQSIRTFKQIHAHIIKTG-LHNTLFALSKLIEFSAVSRSGDISYAISL 85

Query: 236 FDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ I EP++  W+  I   + +     A   F  + ++  + N YT   LL S       
Sbjct: 86  FNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASA 145

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA---------------------- 330
             GKQI A   K+GF+  V I  +LI+MY + G++N+A                      
Sbjct: 146 HEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGY 205

Query: 331 ---------RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
                    R +FD +  KD VSWN+MIAGY++ G   +AL +F  M + ++ PN  T+ 
Sbjct: 206 ALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIV 265

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           S+L A + S +L     + S I   G   +  +++ LI  Y KC  L  ++ +  ++ ++
Sbjct: 266 SVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER 325

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           + +  N +     +   + EAL L+R +  S  E    TF  +L +CA +  ++ GK IH
Sbjct: 326 DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIH 385

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
               K        + +++ID+Y KCG I  A++ F  +   SLA WNAM+ G A HG   
Sbjct: 386 AYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQAD 445

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           +   LF+KMS  G++P+EIT++ +L++C HAGLV   + + S M   + + P+ +HY C+
Sbjct: 446 KAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCM 505

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           +DLLGR GL E A+  +  M + PD  IW SLL AC  +G ++LG L   +L EL+PDN 
Sbjct: 506 IDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNP 565

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSK 741
             YVLLSN+YA AG W+DV ++R  + ++ + K PG + I V    H F  GD  H QS+
Sbjct: 566 GAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSE 625

Query: 742 EIYKELIKLYEHM 754
           +IY+ L ++ E +
Sbjct: 626 DIYRMLEEVDEQL 638



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 228/484 (47%), Gaps = 45/484 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLI--SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI++ +IK G H      + LI  S  ++  D   A       +  ++  +N++I GL+ 
Sbjct: 47  QIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSM 106

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYL 115
                 AL  F R+ Y G+ P+++TF  L+K+C  L    E + +H   LKLGF S V++
Sbjct: 107 SLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFI 166

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE------ 169
            +  I  YA+SGE+ +A++ F      D +++TA++ GY   G  D+++++F E      
Sbjct: 167 HTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDV 226

Query: 170 -------------------------MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGF 201
                                    MR   +  NE ++ +VL A   S  +  G  +  +
Sbjct: 227 VSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSW 286

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGV 258
               G  S +   L NA++++Y +CG    A ++FD++ E DV+SW+  I      C   
Sbjct: 287 IEDRGLCSNL--KLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYK 344

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  LF+++  +  +  E T +++L S      +  GK I A+  K       S+  +LI
Sbjct: 345 EALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLI 404

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            +Y KCG +  AR +FD +  K   SWN+MI G + +G  ++A ++F  M    + PN  
Sbjct: 405 DLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEI 464

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLSE 437
           T   IL A  ++  +    Q  S +++   +   S    C+I   G+     E++ +L  
Sbjct: 465 TFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQN 524

Query: 438 IDKK 441
           ++ K
Sbjct: 525 MEVK 528



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 235/514 (45%), Gaps = 45/514 (8%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA--KSGEIVSAEMCFRDCLDLDN 144
           L+  C S++  + +H   +K G  + ++ +S  IE  A  +SG+I  A   F    + + 
Sbjct: 35  LLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNL 94

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGF 201
             + +M+ G   +     +   FV M   G+E N ++   +L +   +    EG+QIH  
Sbjct: 95  FIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAH 154

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQK------------LDAV---------------- 233
            +K+GF+S V  H   +++N+Y + G+              DA+                
Sbjct: 155 VLKLGFVSDVFIH--TSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 234 ---KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
              ++FDE+   DVVSW+  IA         EA  LF+D+R  +   NE T++++LS+  
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  G  ++++    G    + + NALI MY KCG +  AR +FD ++ +D +SWN 
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI GY+    + +AL +F  ML   + P   T  SIL + ++  ++     +H++I K+ 
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             +  S+ + LI  Y KC  +  +++V   +  K+    NA+   L       +A EL+ 
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452

Query: 468 TIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            +     E N  TF  +L AC  A + DL Q +    +    +          +ID+  +
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQ-QFFSSMVQDYKISPKSQHYGCMIDLLGR 511

Query: 526 CGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
            G  E+A+   + +  +   A W +++     HG
Sbjct: 512 AGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHG 545



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 176/367 (47%), Gaps = 21/367 (5%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           L+    +  D I  T LI+ +  +    RA +   +   +D++++NA+I+G A+  +S  
Sbjct: 185 LVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKE 244

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLK-----LGFSSRVYLVSGF 119
           AL LF+ +R   + P+  T  S++ AC   Q N +  G  ++      G  S + LV+  
Sbjct: 245 ALLLFEDMRKANVPPNESTIVSVLSACA--QSNALDLGNSMRSWIEDRGLCSNLKLVNAL 302

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I+ Y+K G++ +A   F D L+ D +++  M+ GY     + ++  +F EM + G+E  E
Sbjct: 303 IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362

Query: 180 FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +  ++L +      +  G+ IH +  K    + V   L+ ++++LY +CG  + A ++F
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYINKN--FNSVSTSLSTSLIDLYAKCGNIVAARQVF 420

Query: 237 DEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D +    + SW+  I   A      +AF LF  +  +  + NE T + +LS+     ++ 
Sbjct: 421 DGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480

Query: 294 AGKQIQAFCYKVGFMEVVSIGN---ALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
            G+Q   F   V   ++         +I + G+ G   +A S+   +  K D   W S++
Sbjct: 481 LGQQF--FSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538

Query: 350 AGYSENG 356
               ++G
Sbjct: 539 GACRDHG 545


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 188/580 (32%), Positives = 318/580 (54%), Gaps = 6/580 (1%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           SL  +  A  D+  G  +H      G           A+ N+Y +C +  DA ++FD + 
Sbjct: 230 SLLKLCAARADLATGRAVHAQLAARGLSPEALA--ATALANMYAKCRRPGDARRVFDRMP 287

Query: 241 EPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQ-INEYTMINLLSSVGGERILRAGK 296
             D V+W+  +A  A +G+   A G+   ++  D +  +  T++++L +    + L A +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           ++ AF  + GF E V++  A++ +Y KCG V+ AR +FD +  ++SVSWN+MI GY+ENG
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +AL +F  M+   +     ++ + L A      L +  +VH  +++ G   + ++++
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            LIT Y KC   + + +V  E+  K  V  NA+           +A+ L+  +     + 
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +  T   ++ A A ++D  Q + IH  +++   DQD++V +A+IDMY KCG +  A+  F
Sbjct: 528 DSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLF 587

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
                  +  WNAM+ GY  HG       LF +M   G  P+E T+L+VL++C HAGLV 
Sbjct: 588 NSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVD 647

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E + Y S M + +GL P +EHY  +VDLLGR G L  A   I +MP+ P   ++ ++L A
Sbjct: 648 EGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGA 707

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C ++ N++L   +  ++ EL+P+    +VLL+N+YA+A +W DV ++R  M++K L K P
Sbjct: 708 CKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTP 767

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           G+S + +    H FY+G ++H Q+K+IY  L KL E + A
Sbjct: 768 GWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKA 807



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 259/559 (46%), Gaps = 29/559 (5%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIV 100
           R   + + L   LA F    PA          G  P   TF+SL+K C +   L     V
Sbjct: 197 RAAASRSDLRGALAAFAAMSPA---------SGSGPVLRTFTSLLKLCAARADLATGRAV 247

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H      G S      +     YAK      A   F      D VA+ A+V GY  NG  
Sbjct: 248 HAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLA 307

Query: 161 DKSKEVFVEMRSL-GLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLN 216
           + +  + V M+   G   +  +L +VL A  D +      ++H F V+ GF   V  +++
Sbjct: 308 EAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQV--NVS 365

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQ 273
            AI+++Y +CG    A K+FD + + + VSW+  I   A   D  EA  LFK +      
Sbjct: 366 TAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVD 425

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           + + +++  L + G    L  G+++     ++G    V++ NALI+MY KC + + A  +
Sbjct: 426 VTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQV 485

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD L +K  VSWN+MI G ++NG    A+ +F  M   ++ P+ +T+ SI+ A+++    
Sbjct: 486 FDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDP 545

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            QA  +H + I+     D  +++ LI  Y KC  ++ ++ + +    ++ +  NA+    
Sbjct: 546 LQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGY 605

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                   A+EL+  +  S +  N +TF  VL AC+    +++G+  +  ++K  Y  + 
Sbjct: 606 GSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE-YFSSMKEDYGLEP 664

Query: 514 FVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            +E    ++D+  + G + +A    +K+  +        M+G  +    H+   L  + +
Sbjct: 665 GMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACK---LHKNVELAEESA 721

Query: 572 K--FGVKPDEITYLAVLTS 588
           +  F ++P+E  Y  +L +
Sbjct: 722 QRIFELEPEEGVYHVLLAN 740



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 230/460 (50%), Gaps = 21/460 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           +++ L   G   + + +T L + + K     D RR F  +     RD + +NAL++G AR
Sbjct: 247 VHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM---PARDRVAWNALVAGYAR 303

Query: 59  FCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
              +  A+ +  R++ + G RPDA T  S++ AC   Q       VH   ++ GF  +V 
Sbjct: 304 NGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVN 363

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ Y K G + SA   F    D ++V++ AM+ GY  NG+  ++  +F  M   G
Sbjct: 364 VSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG 423

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +++ + S+ A L A  +   + EG ++H   V++G  S V  ++ NA++ +Y +C +   
Sbjct: 424 VDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNV--NVMNALITMYCKCKRTDL 481

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FDE+     VSW+  I          +A  LF  ++  + + + +T+++++ ++  
Sbjct: 482 AAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALAD 541

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                  + I  +  ++   + V +  ALI MY KCG+V+ ARS+F+    +  ++WN+M
Sbjct: 542 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAM 601

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY  +G    A+++F  M     +PN  T  S+L A S++  + +  +  S  +K  +
Sbjct: 602 IHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSS-MKEDY 660

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            L+  M     ++   G+   L+E+   + ++  +  + +
Sbjct: 661 GLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISV 700



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 216/447 (48%), Gaps = 15/447 (3%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  +LL        L  G+ + A     G         AL +MY KC +  DAR +FD +
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQA 396
             +D V+WN+++AGY+ NG    A+ M   M E     P+  T+ S+L A +++++L   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            +VH+  ++ GF    ++ + ++  Y KC A++ +++V   +  +N+V  NA+       
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EAL L++ + G   +V   +    L AC  +  L++G+ +H L ++   + ++ V 
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+I MYCKC   + A + F ++   +   WNAM++G  Q+G   +   LF++M    VK
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           PD  T ++++ +        +AR        LH L   +     ++D+  + G +  A+ 
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYAKCGRVSIARS 585

Query: 637 TIDQMPIPPDAHI--WQSLLSACTIYGNIDLGLLAGSKLLELQPD----NESTYVLLSNL 690
             +      D H+  W +++     YG+   G +A     E++      NE+T++ + + 
Sbjct: 586 LFNSA---RDRHVITWNAMIHG---YGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSA 639

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPG 717
            + AG+ ++  +    MKE +   EPG
Sbjct: 640 CSHAGLVDEGQEYFSSMKEDYGL-EPG 665



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 168/354 (47%), Gaps = 12/354 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++  ++ G      +ST ++  + K      A +     Q+R+ +++NA+I G A   
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +  AL LF R+  +G+     +  + + ACG    L E   VH + +++G  S V +++
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K      A   F +      V++ AM+ G   NG  + +  +F  M+   ++ 
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527

Query: 178 NEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+L +++ A  D+ +  Q   IHG+ +++     V  ++  A++++Y +CG+   A  
Sbjct: 528 DSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDV--YVLTALIDMYAKCGRVSIARS 585

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+   +  V++W+  I    +   G  A  LF++++ +    NE T +++LS+     +
Sbjct: 586 LFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGL 645

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +  G++   +     G    +     ++ + G+ G++++A S    +  +  +S
Sbjct: 646 VDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGIS 699


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 224/711 (31%), Positives = 374/711 (52%), Gaps = 22/711 (3%)

Query: 59  FCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSR 112
            C +G    A+KL + ++   +  D   F +LV+ C    + +E   V+ V L    S  
Sbjct: 69  LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLS 128

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V L + F+  + + G +V A   F    + +  ++  +V GY   G FD++  ++  M  
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLW 188

Query: 173 LG-LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           +G ++ + ++   VL   G   D+  G ++H   V+ G+   +   + NA++ +YV+CG 
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDI--DVVNALITMYVKCGD 246

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
              A  +FD +   D++SW+  I+   +   G E   LF  +R      +  T+ +++S+
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISA 306

Query: 286 --VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
             + G+R  R G+ I A+    GF   +S+ N+L  MY   G   +A  +F  +  KD V
Sbjct: 307 CELLGDR--RLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIV 364

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW +MI+GY  N    +A+D +  M + S+ P+  T+A++L A +    L   +++H   
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           IK+  +    + + LI  Y KC  ++++  +   I +KN +   ++ + L   +   EAL
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
             +R +  + +  N  T +  L ACA +  L  GK IH   L+     D F+ +A++DMY
Sbjct: 485 IFFRQMKMTLQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            +CG +  A   F    +D ++ WN ++ GY++ G    V  LF++M K  V+PDEIT++
Sbjct: 544 VRCGRMNIAWNQFNSQKKD-VSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFI 602

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L  C  + +VR+   Y S M + +G+ P L+HYAC+VDLLGR G L+ A   I +MP+
Sbjct: 603 SLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 661

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
            PD  +W +LL+AC I+ NIDLG L+  ++ EL   +   Y+LL NLYA  G W +V K+
Sbjct: 662 TPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKV 721

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           R+ MKE  L  + G SW+ V G  H F + D  H Q+KEI   L   YE M
Sbjct: 722 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKM 772



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 223/433 (51%), Gaps = 10/433 (2%)

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNE---FSLTAVLGASFDVKEGEQIHGFGVKVGFLS 209
           G   NG+ +++ ++   M+ L + ++E    +L  +       +EG ++  + V +  ++
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKV--YSVALSSMN 125

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF-K 265
            +   L NA + ++VR G  +DA  +F +++E ++ SW+  +   A  G   EA  L+ +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            L     + + YT   +L + GG   L  G+++     + G+   + + NALI+MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            V  AR +FD +  +D +SWN+MI+GY ENG  ++ L +F  M   S+ P+  T+ S++ 
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A       +    +H+++I +GF +D S+ + L   Y    +  E++++ S +D K+ V 
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
              + S   Y     +A++ YR +     + +  T + VL ACA + DL+ G  +H LA+
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           KAR    + V + +I+MY KC  I+ A   F  I R ++  W +++ G   +    E   
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485

Query: 566 LFNKMSKFGVKPD 578
            F +M K  ++P+
Sbjct: 486 FFRQM-KMTLQPN 497



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 223/452 (49%), Gaps = 23/452 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +++  +++ G+ LD  +   LI+ + K  D + A R LFD    RDII++NA+ISG    
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA-RLLFDRMPRRDIISWNAMISGYFEN 275

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                 LKLF  +R   + PD  T +S++ AC  L +  +   +H   +  GF+  + + 
Sbjct: 276 GMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335

Query: 117 SGFIENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +   + Y  +G    AE  F   DC D+  V++T M+ GY +N   +K+ + +  M    
Sbjct: 336 NSLTQMYLYAGSWREAEKLFSRMDCKDI--VSWTTMISGYEYNFLPEKAIDTYRMMDQDS 393

Query: 175 LELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +E ++ AVL A     D+  G ++H   +K   +S V   + N ++N+Y +C     
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI--VANNLINMYSKCKCIDK 451

Query: 232 AVKMFDEITEPDVVSWSERIAA-----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           A+ +F  I   +V+SW+  IA       C   EA   F+ ++    Q N  T+   L++ 
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRC--FEALIFFRQMKMT-LQPNAITLTAALAAC 508

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GK+I A   + G      + NAL+ MY +CG++N A + F+    KD  SWN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWN 567

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            ++ GYSE G  +  +++F  M++  + P+  T  S+L     S+ ++Q +   S + + 
Sbjct: 568 ILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEY 627

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           G   +    +C++   G+   L E+ + + ++
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 214/742 (28%), Positives = 380/742 (51%), Gaps = 41/742 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRL 72
           D  ++  L++ + KF   +   R LF+    RD++ +N ++           A+ L    
Sbjct: 186 DDFVAGALVNIYLKFGKVKEG-RVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 244

Query: 73  RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
              GL P+  T   L +  G   E                    +G ++++    +  + 
Sbjct: 245 HTSGLHPNEITLRLLSRISGDDSE--------------------AGQVKSFENGNDASAV 284

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
                     + ++   ++ GY+  G++    + F++M    LE ++ +   VL  +  +
Sbjct: 285 S---------EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRL 335

Query: 193 KE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
                G+Q+H   +K+G    +   ++N+++N+Y +  +   A  +F+ ++E D++SW+ 
Sbjct: 336 DSLALGQQVHCMALKLGL--DLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNS 393

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG-ERILRAGKQIQAFCYKV 305
            IA        VEA  LF  L     + + YTM ++L +       L   KQI     K 
Sbjct: 394 VIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKT 453

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
             +    +  ALI  Y +   + +A  +F    F D V+WN+M++GY+++   ++ L++F
Sbjct: 454 NNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELF 512

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M +     + +T+A++L+      ++ Q  QVH++ IKSG+ LD  + S ++  Y KC
Sbjct: 513 ALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 572

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             ++ ++     I   + V    L S  +       AL ++  +       +  T + + 
Sbjct: 573 GDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLA 632

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           KA + +T LEQG+ IH  ALK     D FV ++++DMY KCG+I+DA   F++I   ++ 
Sbjct: 633 KASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 692

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM++G AQHG   E   LF +M   G+KPD++T++ VL++C H+GLV EA  Y+  M
Sbjct: 693 AWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSM 752

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
              +G+ P++EHY+C+ D LGR GL++ A+  ID M +   A ++++LL+AC + G+ + 
Sbjct: 753 HRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTET 812

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G    +KLLEL+P + S YVLLSN+YA+A  W+++   R  MK   + K+PG+SWI V  
Sbjct: 813 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 872

Query: 726 YTHHFYAGDSSHSQSKEIYKEL 747
             H F   D S+ Q++ IYK++
Sbjct: 873 KIHLFVVDDRSNPQTELIYKKV 894



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 277/589 (47%), Gaps = 44/589 (7%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS-----GPALKLFDR 71
           L   LIS ++K      A R       RD++++N++++  A+  +        A  LF  
Sbjct: 83  LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           LR   +     T S ++K C   G +  +E  HG   K+G     ++    +  Y K G+
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +    + F +    D V +  M+  Y+  G  +++ ++     + GL  NE +L  +   
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRI 262

Query: 189 SFDVKEGEQIHGF--GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           S D  E  Q+  F  G     +S + +   N I++ Y+  GQ    +K F ++ E D+  
Sbjct: 263 SGDDSEAGQVKSFENGNDASAVSEIISR--NKILSGYLHAGQYSALLKCFMDMVESDL-- 318

Query: 247 WSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
                   CD V                   T I +L++      L  G+Q+     K+G
Sbjct: 319 -------ECDQV-------------------TFILVLATAVRLDSLALGQQVHCMALKLG 352

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
              ++++ N+LI+MY K  ++  AR++F+ +  +D +SWNS+IAG +++    +A+ +F 
Sbjct: 353 LDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFM 412

Query: 367 HMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
            +L   L P+ YTM S+L+A S+  + L  + Q+H H IK+  + D  + + LI  Y + 
Sbjct: 413 QLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRN 472

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             + E++ VL   +  + V  NA+ S    +    + LEL+  +       +  T + VL
Sbjct: 473 RCMKEAE-VLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVL 531

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           K C  +  + QGK +H  A+K+ YD D++V S ++DMY KCG +  A+ AF  I      
Sbjct: 532 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 591

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY--LAVLTSCCHA 592
            W  ++ G  ++G      ++F++M   GV PDE T   LA  +SC  A
Sbjct: 592 AWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTA 640



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 247/492 (50%), Gaps = 36/492 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ + +K G  L   +S +LI+ + K      A     +   RD+I++N++I+G+A+  
Sbjct: 343 QVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSD 402

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE----NEIVHGVCLKLGFSSRVYLV 116
               A+ LF +L   GL+PD +T +S++KA  SL E    ++ +H   +K    +  ++ 
Sbjct: 403 LEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVS 462

Query: 117 SGFIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  I+ Y+++  +  AE+ F R+  DL  VA+ AM+ GY  + +  K+ E+F  M   G 
Sbjct: 463 TALIDAYSRNRCMKEAEVLFGRNNFDL--VAWNAMMSGYTQSHDGHKTLELFALMHKQGE 520

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             ++F+L  VL   G  F + +G+Q+H + +K G+   +   +++ I+++YV+CG    A
Sbjct: 521 RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLW--VSSGILDMYVKCGDMSAA 578

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              FD I  PD V+W+  I+   +  E   A  +F  +R      +E+T+  L  +    
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+QI A   K+       +G +L+ MY KCG ++DA  +F  +   +  +WN+M+
Sbjct: 639 TALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 698

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGF 408
            G +++G   +AL +F  M    + P+  T   +L A S+S  + +A + + S     G 
Sbjct: 699 VGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGI 758

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +    SCL    G+   + E++ ++      +++ + A AS             +YRT
Sbjct: 759 KPEIEHYSCLADALGRAGLVKEAENLI------DSMSMEASAS-------------MYRT 799

Query: 469 IWGSCREVNGST 480
           +  +CR V G T
Sbjct: 800 LLAACR-VQGDT 810



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 263/594 (44%), Gaps = 51/594 (8%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
            H   L L  +   +LV+  I  Y+K G +  A   F    + D V++ +++  Y  + E
Sbjct: 68  THARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSE 127

Query: 160 --FDKSKEVFVEMRSLGLEL---NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGV 211
              +  KE F+  R L  ++   +  +L+ +L        V   E  HG+  K+G L G 
Sbjct: 128 GVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIG-LDGD 186

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR 268
            + +  A++N+Y++ G+  +   +F+E+   DVV W+  + A  +     EA  L     
Sbjct: 187 -DFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 245

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            +    NE T+  LLS + G+       Q+++F                          N
Sbjct: 246 TSGLHPNEITL-RLLSRISGDD--SEAGQVKSF-----------------------ENGN 279

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           DA ++       + +S N +++GY   G ++  L  F  M+E  L  +  T   +L    
Sbjct: 280 DASAV------SEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAV 333

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
              SL    QVH   +K G  L  ++ + LI  Y K   +  ++ V + + +++ +  N+
Sbjct: 334 RLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNS 393

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKA 507
           + + +  +    EA+ L+  +     + +  T + VLKA +++ + L   K IH  A+K 
Sbjct: 394 VIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKT 453

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
               D FV +A+ID Y +   +++A+  F +   D L  WNAMM GY Q    H+   LF
Sbjct: 454 NNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFD-LVAWNAMMSGYTQSHDGHKTLELF 512

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M K G + D+ T   VL +C     + + +  +   +   G    L   + I+D+  +
Sbjct: 513 ALMHKQGERSDDFTLATVLKTCGFLFAINQGKQ-VHAYAIKSGYDLDLWVSSGILDMYVK 571

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPD 679
            G +  A+   D +P+P D   W +L+S C   G  +  L + +  +L+ + PD
Sbjct: 572 CGDMSAAQFAFDSIPVPDDV-AWTTLISGCIENGEEERALHVFSQMRLMGVLPD 624



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 33/190 (17%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L+   + +DL  GK  H   L    + + F+ + +I MY KCG++  A+R F K+    L
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 545 AGWNAMMMGYAQ--HGCYHEVSN---LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
             WN+++  YAQ   G    V     LF  + +  V    +T   +L  C H+G      
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG------ 166

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLG-------------RVGLLEGAKMTIDQMPIPPD 646
            Y+      HG       YAC + L G             + G ++  ++  ++MP   D
Sbjct: 167 -YVCASESFHG-------YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPY-RD 217

Query: 647 AHIWQSLLSA 656
             +W  +L A
Sbjct: 218 VVLWNLMLKA 227


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 199/648 (30%), Positives = 341/648 (52%), Gaps = 16/648 (2%)

Query: 119 FIENYAKSGE---IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  Y+ SG    + +A   F +    D V++ +++  +V  G    +  +  +M + GL
Sbjct: 32  LLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGL 91

Query: 176 ELNEFSL---TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             + F+L        A+   + G Q+  F VK G +  V +   +A++++Y +CG+  DA
Sbjct: 92  TASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFS--ASALLDVYAKCGRLSDA 149

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD +   + VSW+  IA   +     +A  LF +++  +   ++ T   LL++V G 
Sbjct: 150 RRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGP 209

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                 +Q+     K G    + + NA I+ Y +CG   D+R IFD +  +D +SWNSM+
Sbjct: 210 SWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSML 269

Query: 350 AGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSK-SLKQAMQVHSHIIKSG 407
             Y+ +G  ++A+  F  M+ E  + P+ Y+  S++   S      +Q   +HS ++K G
Sbjct: 270 GAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIG 329

Query: 408 FLLDDSMISCLITTYGKCNA---LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
                 + + +I  Y +      + ++ +    +  K+AV  N++ +   +    ++AL 
Sbjct: 330 LEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALR 389

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
            +R +       +    S  L++C+ +  L  G+ +H L +++ +  + FV S++I MY 
Sbjct: 390 FFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYS 449

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG + DA+++F +  + S   WN+MM GYAQHG    V++LF++M    V  D +T++A
Sbjct: 450 KCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVA 509

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +LT+  H GLV E    L+ M   + +  ++EHYAC VDL GR G L+ AK  I+ MP  
Sbjct: 510 LLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQ 569

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           PDA +W +LL AC I+GN++L     S L   +P   STYVLLS++Y+  GMW+D   ++
Sbjct: 570 PDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQ 629

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           K MK + L K PG+SWI V    H F A D SH +  EI+  L  L +
Sbjct: 630 KVMKNRGLSKVPGWSWIEVKNEVHSFNADDRSHPRMDEIFDMLRMLLQ 677



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 263/525 (50%), Gaps = 36/525 (6%)

Query: 34  AFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
           A R +FD   R D +++N+L++          A +L   +  +GL    F   S +++  
Sbjct: 47  AARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAA 106

Query: 93  SLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
           + +  E+   +    +K G    V+  S  ++ YAK G +  A   F      + V++ A
Sbjct: 107 AARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNA 166

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEG-------EQIHGFG 202
           ++ GY  + +  ++ E+F+EM+ + L  ++ +  A+L       EG       +Q+HG  
Sbjct: 167 LIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLA----TVEGPSWYSLMQQLHGKI 222

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--E 259
            K G   G+   + NA +  Y +CG   D+ ++FD I   D++SW+  + A A  G+  E
Sbjct: 223 AKYGSALGLV--VLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDE 280

Query: 260 AFGLF-KDLRFNDFQINEYTMINLLSSVGGERIL--RAGKQIQAFCYKVGFMEVVSIGNA 316
           A   F + +R +  Q + Y+  +++ SV  E     R G+ I +   K+G   V  + NA
Sbjct: 281 AMRFFVRMMRESGVQPDMYSFTSVV-SVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNA 339

Query: 317 LISMYGKCGQ---VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           +I+MY +  +   + DA   FD L+FKD+VSWNSM+ GYS +G  + AL  F  M   ++
Sbjct: 340 MIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENV 399

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             + + +++ L + S+   L+   QVHS +I+SGF  +D + S LI  Y KC  + ++++
Sbjct: 400 STDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARK 459

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEA---LELYRTIWGSCREVNGSTFSIVLKACAA 490
              E DK ++V  N++  +  YA  H +A    +L+  +      ++  TF  +L A + 
Sbjct: 460 SFEEADKGSSVPWNSM--MFGYAQ-HGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSH 516

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAV--IDMYCKCGTIEDAK 533
              +++G  I   +++ RY   + +E     +D+Y + G ++ AK
Sbjct: 517 GGLVDEGSEI-LNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAK 560



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 217/453 (47%), Gaps = 17/453 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ S  +K+G   +   ++ L+  + K      A R       R+ +++NALI+G A   
Sbjct: 116 QLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESR 175

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   A++LF  ++   L PD  TF++L   V+        + +HG   K G +  + +++
Sbjct: 176 KPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLN 235

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSLGLE 176
             I  Y++ G    +   F      D +++ +M+  Y ++G  D++   FV  MR  G++
Sbjct: 236 AAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQ 295

Query: 177 LNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-- 230
            + +S T+V+        D ++G  IH   VK+G L GV  H+ NA++ +Y R  +    
Sbjct: 296 PDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIG-LEGV-THVCNAMIAMYTRFTENCMM 353

Query: 231 -DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K FD +   D VSW+  +          +A   F+ +R  +   +E+ +   L S 
Sbjct: 354 EDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSC 413

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               +LR G+Q+ +   + GF     + ++LI MY KCG V DAR  F+      SV WN
Sbjct: 414 SDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWN 473

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIK 405
           SM+ GY+++G      D+F  ML+  +  +  T  ++L A S+   + +  ++ +S   +
Sbjct: 474 SMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETR 533

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
               L     +C +  YG+   L+++K ++  +
Sbjct: 534 YKIPLRMEHYACGVDLYGRAGQLDKAKELIESM 566



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 21/261 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFAD---FRRAFRFLFDTQNRDIITYNALISGLAR 58
           I+SL++K G      +   +I+ +T+F +      A++       +D +++N++++G + 
Sbjct: 321 IHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSH 380

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYL 115
              S  AL+ F  +R + +  D F  S+ +++C  L   +    VH + ++ GFSS  ++
Sbjct: 381 HGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFV 440

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  I  Y+K G +  A   F +     +V + +M+ GY  +G+     ++F EM    +
Sbjct: 441 SSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKV 500

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHG-----FGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            L+  +  A+L A      V EG +I       + + +      C       ++LY R G
Sbjct: 501 PLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACG------VDLYGRAG 554

Query: 228 QKLDAVKMFDEIT-EPDVVSW 247
           Q   A ++ + +  +PD + W
Sbjct: 555 QLDKAKELIESMPFQPDAMVW 575


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 183/600 (30%), Positives = 321/600 (53%), Gaps = 9/600 (1%)

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           ++F  MR   + LN+F   +++ A+  + +   GE IH    K GF S +   ++NA + 
Sbjct: 76  QLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDIL--ISNAFVT 133

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYT 278
           +Y++     +  + F  +   ++ S +  ++  CD     +   +   L    F+ N YT
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
            I++L +   +  L  GK I     K G      + N+L+++Y KCG  N A  +F  + 
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D VSW ++I G+   G+    L +F  ML     PN YT  SIL + S+   +    Q
Sbjct: 254 ERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           VH+ I+K+    +D + + L+  Y K   L +++ + + + K++      + +       
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             +A++ +  +     + N  T +  L  C+ +  L+ G+ +H +A+KA    D+FV SA
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASA 432

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++DMY KCG +EDA+  F  +       WN ++ GY+QHG   +    F  M   G  PD
Sbjct: 433 LVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 492

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           E+T++ VL++C H GL+ E + + + +S ++G+ P +EHYAC+VD+LGR G     +  I
Sbjct: 493 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 552

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
           ++M +  +  IW+++L AC ++GNI+ G  A  KL EL+P+ +S Y+LLSN++A+ GMW+
Sbjct: 553 EEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWD 612

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           DV  +R  M  + + KEPG SW+ V G  H F + D SH + +EI+ +L  L++ +++  
Sbjct: 613 DVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 672



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 243/503 (48%), Gaps = 14/503 (2%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           +IKNG   D  L ++L++ + K    + A + L +   +D+  +N  +S          A
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIEN 122
           ++LF  +R+  +R + F F+SL+ A  SL +N   E +H    K GF S + + + F+  
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K+  + +    F+  +  +  +   ++ G+      D+   + +++   G E N ++ 
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 183 TAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            ++L    +  D+ EG+ IHG  +K G      +HL N+++N+Y +CG    A K+F EI
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPD--SHLWNSLVNVYAKCGSANYACKVFGEI 252

Query: 240 TEPDVVSWSERIAAACDGVEAFG----LFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
            E DVVSW+  I       E +G    +F  +    F  N YT I++L S      +  G
Sbjct: 253 PERDVVSWTALITGFV--AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           KQ+ A   K        +G AL+ MY K   + DA +IF+ LI +D  +W  ++AGY+++
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   +A+  F  M    + PN +T+AS L   S   +L    Q+HS  IK+G   D  + 
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S L+  Y KC  + +++ V   +  ++ V  N +           +AL+ +  +      
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490

Query: 476 VNGSTFSIVLKACAAMTDLEQGK 498
            +  TF  VL AC+ M  +E+GK
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGK 513



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 225/457 (49%), Gaps = 17/457 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL--ARF 59
           I++ + K G   D ++S   ++ + K       ++F       ++ + N L+SG      
Sbjct: 112 IHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTET 171

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
           C  GP  ++  +L  +G  P+ +TF S++K C   G L E + +HG  +K G +   +L 
Sbjct: 172 CDQGP--RILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLW 229

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK G    A   F +  + D V++TA++ G+V  G +     +F +M + G  
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFN 288

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N ++  ++L    +  DV  G+Q+H   VK   L G  + +  A++++Y +     DA 
Sbjct: 289 PNMYTFISILRSCSSLSDVDLGKQVHAQIVK-NSLDG-NDFVGTALVDMYAKNRFLEDAE 346

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+ + + D+ +W+  +A       G +A   F  ++    + NE+T+ + LS      
Sbjct: 347 TIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIA 406

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L +G+Q+ +   K G    + + +AL+ MY KCG V DA  +FD L+ +D+VSWN++I 
Sbjct: 407 TLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIIC 466

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFL 409
           GYS++G   +AL  F  ML+   +P+  T   +L A S+   +++  +  + + K  G  
Sbjct: 467 GYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT 526

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                 +C++   G+    +E +  + E+   + V I
Sbjct: 527 PTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLI 563



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 95/191 (49%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++KN    +  + T L+  + K      A         RD+  +  +++G A+  
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   A+K F +++ +G++P+ FT +S +  C    +L     +H + +K G S  +++ S
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVAS 431

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G +  AE+ F   +  D V++  ++CGY  +G+  K+ + F  M   G   
Sbjct: 432 ALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVP 491

Query: 178 NEFSLTAVLGA 188
           +E +   VL A
Sbjct: 492 DEVTFIGVLSA 502


>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
 gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
          Length = 577

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 176/539 (32%), Positives = 300/539 (55%), Gaps = 6/539 (1%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLR-FNDFQINEY 277
           +Y + G   DA K+FDE+   D VSW+  I+    DG     FG FK ++    +++++ 
Sbjct: 1   MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+  +LS+     +    K +       GF   +S+GNALI+ Y KCG  +    +FD +
Sbjct: 61  TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           + ++ ++W ++I+G  ++  +  +L +F  M    + PN  T  S L A S  ++L++  
Sbjct: 121 LERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGC 180

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q+H  + K G   D  + S L+  Y KC ++ ++ ++     + + V +  + +      
Sbjct: 181 QIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNG 240

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              EA++ +  +  +  E++ +  S VL    A T L  G+ IH L +K  +  + FV +
Sbjct: 241 FEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGN 300

Query: 518 AVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            +I+MY KCG +ED+ + F ++ C +S++ WN+M+  +A+HG       L+ +M   GV+
Sbjct: 301 GLINMYSKCGDLEDSTKVFSRMPCMNSVS-WNSMIAAFARHGDGSRALQLYKEMRLKGVE 359

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P ++T+L++L +C H GLV +   +L  M+++H L P++EHYAC+VD+LGR GLL  AK 
Sbjct: 360 PTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKT 419

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I+ +PI PD  +WQ+LL AC I+G+ ++G  A   L+   P+  S Y+LL+N+Y+S G 
Sbjct: 420 FIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYSSKGR 479

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           W +  K  K MKE  + KE G SWI +    H F   D  H Q++ IY  L +L+ HM+
Sbjct: 480 WKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIYGVLAELFGHMI 538



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 215/451 (47%), Gaps = 23/451 (5%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFS 181
           YAK+G +  A   F +    D V++  M+ G++ +G FD     F +M+SLG   L++ +
Sbjct: 2   YAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQAT 61

Query: 182 LTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           LT +L A    + G   + +H   V  GF   +   + NA++  Y +CG     +++FDE
Sbjct: 62  LTTILSACDRPELGFVNKMVHCLAVLNGFQREIS--VGNALITSYFKCGFSSSGMQVFDE 119

Query: 239 ITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + E +V++W+  I+         ++  LF ++     + N  T ++ L +  G + LR G
Sbjct: 120 MLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREG 179

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
            QI    +K+G      + +AL+ MY KCG + D   IF+     D VS   ++AG+++N
Sbjct: 180 CQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN 239

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           GF  +A+  F  MLE     +   ++++L       SL    Q+HS +IK  F  +  + 
Sbjct: 240 GFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVG 299

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + LI  Y KC  L +S +V S +   N+V  N++ +        + AL+LY+ +     E
Sbjct: 300 NGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVE 359

Query: 476 VNGSTFSIVLKACAAMTDLEQG-------KAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
               TF  +L AC+ +  +E+G         +H L  +  +       + V+DM  + G 
Sbjct: 360 PTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEH------YACVVDMLGRAGL 413

Query: 529 IEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           + +AK     +  +  +  W A++     HG
Sbjct: 414 LNEAKTFIEGLPIKPDVLVWQALLGACGIHG 444



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 210/421 (49%), Gaps = 14/421 (3%)

Query: 38  LFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQ 95
           LFD    RD +++N +ISG  +          F +++  G  R D  T ++++ AC   +
Sbjct: 14  LFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPE 73

Query: 96  ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
               N++VH + +  GF   + + +  I +Y K G   S    F + L+ + + +TA++ 
Sbjct: 74  LGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIIS 133

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFS-LTAVLGASF--DVKEGEQIHGFGVKVGFLS 209
           G V +  +  S  +FVEM +  +E N  + L++++  S    ++EG QIHG   K+G  S
Sbjct: 134 GLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQS 193

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKD 266
             C  + +A+M++Y +CG   D +++F+   + D VS +  +A  A +G   EA   F  
Sbjct: 194 DFC--VESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVK 251

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +     +I+   +  +L   G +  L  G+QI +   K  F     +GN LI+MY KCG 
Sbjct: 252 MLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGD 311

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + D+  +F  +   +SVSWNSMIA ++ +G  ++AL ++  M    + P   T  S+L A
Sbjct: 312 LEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHA 371

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
            S+   +++ M+    + +   L       +C++   G+   LNE+K  +  +  K  V 
Sbjct: 372 CSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPIKPDVL 431

Query: 446 I 446
           +
Sbjct: 432 V 432



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 25/366 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L + NG   +  +   LI+ + K        +   +   R++IT+ A+ISGL +   
Sbjct: 81  VHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSEL 140

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              +L+LF  +    + P++ T+ S + AC  LQ   E   +HG   KLG  S   + S 
Sbjct: 141 YRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFCVESA 200

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+K G +      F     LD V+ T ++ G+  NG  +++ + FV+M   G E++
Sbjct: 201 LMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEID 260

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
              ++AVL   GA   +  G+QIH   +K  F  G    + N ++N+Y +CG   D+ K+
Sbjct: 261 SNMVSAVLGVFGADTSLGLGQQIHSLVIKRSF--GSNPFVGNGLINMYSKCGDLEDSTKV 318

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLL---SSVG-- 287
           F  +   + VSW+  IAA     DG  A  L+K++R    +  + T ++LL   S VG  
Sbjct: 319 FSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLV 378

Query: 288 --GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVS 344
             G   L++  ++     ++     V      + M G+ G +N+A++  + L  K D + 
Sbjct: 379 EKGMEFLKSMTEVHKLTPRMEHYACV------VDMLGRAGLLNEAKTFIEGLPIKPDVLV 432

Query: 345 WNSMIA 350
           W +++ 
Sbjct: 433 WQALLG 438


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 197/613 (32%), Positives = 328/613 (53%), Gaps = 31/613 (5%)

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVLGASFDVKEGE---QIHGFG 202
           Y  ++  Y  N     S   ++ MRS     L+ F L ++L A      G+   ++HGF 
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---E 259
            K GF S V   + NA+MN+Y +CG  + A  +FD++ E DVVSW+  +          E
Sbjct: 115 QKNGFASDV--FVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGE 172

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEV-VSIGNAL 317
           A  L ++++F   +++   +I+L++  G    +++G+ +  +  + VG  ++ VS+  AL
Sbjct: 173 ALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTAL 232

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I MY K G +  A+ +FD L  +  VSW  MIAG   +   ++    F  MLE  L PN 
Sbjct: 233 IDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNE 292

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T+ S++       +L      H++++++GF +  ++++ LI  YGKC  +  ++ + + 
Sbjct: 293 ITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNG 352

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + KK+    + L S   + SC  +   L+  +  +  + N  T   +L  CA    L+ G
Sbjct: 353 VKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLG 412

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K  H    +   + D+ +E+A+I+MY KCG +  A+  F +  +  +  WN MM G++ H
Sbjct: 413 KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMH 472

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           GC  E   LF++M   GV+P++IT++++  +C H+GL                    +EH
Sbjct: 473 GCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------------MEH 512

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDLLGR G L+ A   I+ MP+ P+  IW +LL+AC ++ N+ LG +A  K+LEL 
Sbjct: 513 YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELD 572

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P N    VL SN+YASA  WNDV  +R+ M    + KEPG SWI V G  HHF +GD + 
Sbjct: 573 PQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKAC 632

Query: 738 SQSKEIYKELIKL 750
           +Q+ ++Y+ + ++
Sbjct: 633 TQTTKVYEMVTEM 645



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 235/492 (47%), Gaps = 12/492 (2%)

Query: 9   NGH-HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           +GH HL+   +  L +HF K   F     F   +       YN LIS          +  
Sbjct: 15  SGHSHLNLQQTHQLHAHFIK-TQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFN 73

Query: 68  LFDRLRYQGLRP-DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENY 123
            +  +R       D F   SL+KAC      ++   +HG   K GF+S V++ +  +  Y
Sbjct: 74  CYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMY 133

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE---F 180
            K G +VSA + F    + D V++T M+  YV +  F ++  +  EM+ +G++L+     
Sbjct: 134 EKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALI 193

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           SL AV G   D+K G  +HG+ V+      +   +  A++++Y + G    A ++FD ++
Sbjct: 194 SLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLS 253

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           +  VVSW+  IA    +C   E    F  +       NE T+++L++  G    L  GK 
Sbjct: 254 KRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKW 313

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
             A+  + GF   +++  ALI MYGKCGQV  AR++F+ +  KD   W+ +I+ Y+    
Sbjct: 314 FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSC 373

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            +Q  ++F  ML   + PN  TM S+L   + + +L      H++I + G  +D  + + 
Sbjct: 374 MDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 433

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y KC  +  ++ + +E  +++    N + +      C  EALEL+  +     E N
Sbjct: 434 LINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPN 493

Query: 478 GSTFSIVLKACA 489
             TF  +  AC+
Sbjct: 494 DITFVSIFHACS 505



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 26/257 (10%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           ++ L++NG  +   L T LI  + K      A       + +D+  ++ LIS  A     
Sbjct: 315 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 374

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGF 119
                LF  +    ++P+  T  SL+  C   G+L   +  H    + G    V L +  
Sbjct: 375 DQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETAL 434

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  YAK G++  A   F + +  D   +  M+ G+  +G   ++ E+F EM S G+E N+
Sbjct: 435 INMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPND 494

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN---NAIMNLYVRCGQKLDAVKMF 236
            +  ++  A         +  +G  V  L G   HL+   N I N+ +R           
Sbjct: 495 ITFVSIFHA---CSHSGLMEHYGCLVDLL-GRAGHLDEAHNIIENMPMR----------- 539

Query: 237 DEITEPDVVSWSERIAA 253
                P+ + W   +AA
Sbjct: 540 -----PNTIIWGALLAA 551


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 217/686 (31%), Positives = 354/686 (51%), Gaps = 36/686 (5%)

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D  T +  +KAC G  +    +HG  +  GF S V + +  ++ Y KSG    A + F +
Sbjct: 78  DEVTVALSLKACQGESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFEN 137

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---GLELNEFSLTAVLG---ASFDV 192
               D V++  ++ G      F++S +     RS+   G+  +  + T+ L         
Sbjct: 138 LSHPDIVSWNTVLSG------FEESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGF 191

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G Q+H   VK G   G    + NA++ +Y R G   +A ++FDE+ E D+VSW+  I+
Sbjct: 192 LFGWQLHSLVVKCGL--GCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMIS 249

Query: 253 A-----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
                  C G+EA  LF ++  +   I+  ++   +S+ G  + L  G+QI     KVG+
Sbjct: 250 GYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGY 309

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              VS+ N L+S Y KC    DA+++F+ +  ++ VSW +MI+   E+     A+ +F  
Sbjct: 310 GTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEED-----AVSLFNA 364

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    + PN  T   ++ AV+    + + + +H   IKS FL + ++ +  IT Y K   
Sbjct: 365 MRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFEC 424

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGSTFSIVL 485
           + ES ++  E++ +  V  NAL S       + EAL  Y +   + +E+  N  TF  VL
Sbjct: 425 IQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLS---AVKEIKPNQYTFGSVL 481

Query: 486 KACAAMTD--LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            A AA  D  L  GK+ H   LK     D  V  A++DMY K G I +++R F +    +
Sbjct: 482 NAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERT 541

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
              W A++  YA+HG +  V +L+ +M + G+ PD IT+L+VL +CC  G+V        
Sbjct: 542 QFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFD 601

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            M   H + P  EHY+ +VD+LGRVG L+ A+  + Q+P  P   + QSLL +C ++GN+
Sbjct: 602 SMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNM 661

Query: 664 DLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           ++      +L+E+ P +   YVL++NLYA  G W  V ++R+ M+ + + KE G+SW+ V
Sbjct: 662 EMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSWVDV 721

Query: 724 GG----YTHHFYAGDSSHSQSKEIYK 745
                 Y H F +GD SH +S+ I K
Sbjct: 722 SNVDSLYLHGFSSGDKSHPESENICK 747



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 267/551 (48%), Gaps = 21/551 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   + +G      +S +L+  + K  +F +A     +  + DI+++N ++SG   F 
Sbjct: 98  QIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSG---FE 154

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
           +S  AL     + Y G+  D  T++S +  C    G L   ++ H + +K G    V++ 
Sbjct: 155 ESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQL-HSLVVKCGLGCEVFIG 213

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV--FVEMRSLG 174
           +  +  Y++ G +  A   F +  + D V++ AM+ GY   G+    + V  FV M   G
Sbjct: 214 NALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHG 273

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + ++  SLT  + A   +K    G QIHG   KVG+ + V   + N +M+ Y +C    D
Sbjct: 274 MLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVS--VCNVLMSTYSKCEVPKD 331

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           A  +F+ I+  +VVSW+  I  + D  +A  LF  +R N    N+ T I L+ +V    +
Sbjct: 332 AKAVFESISNRNVVSWTTMI--SIDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNL 389

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G  I   C K  F+   ++ N+ I+MY K   + ++  IF+ L  +++VSWN++I+G
Sbjct: 390 VTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISG 449

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKSGFL 409
           Y++NG + +AL  +   ++  + PN YT  S+L A++ ++  SL      HSH++K G  
Sbjct: 450 YAQNGSYKEALLTYLSAVK-EIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLG 508

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  +   L+  YGK   + ES+RV +E  ++      A+ S           + LY  +
Sbjct: 509 TDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEM 568

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                  +  TF  VL AC     ++ G +    +  K   +      S ++DM  + G 
Sbjct: 569 EREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGR 628

Query: 529 IEDAKRAFRKI 539
           +++A+    +I
Sbjct: 629 LDEAEELMHQI 639



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 5/260 (1%)

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD++   ++ S N  +     +    QAL  F +  +   + N   +   L   +     
Sbjct: 34  FDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSLKACQGES 93

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           K   Q+H   + SGF+   ++ + L+  Y K     ++  V   +   + V  N + S  
Sbjct: 94  KLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGF 153

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +    +AL   R++       +  T++  L  C        G  +H L +K     ++
Sbjct: 154 EES---VDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEV 210

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG-CYH-EVSNLFNKMS 571
           F+ +A++ MY + G +++A+R F ++    L  WNAM+ GYAQ G CY  E   LF  M 
Sbjct: 211 FIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMV 270

Query: 572 KFGVKPDEITYLAVLTSCCH 591
           + G+  D ++    +++C H
Sbjct: 271 RHGMLIDHVSLTGAVSACGH 290



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 17/237 (7%)

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG--SCREVNGSTFSI 483
           +AL         I   NA  +N      +++    +AL  ++  +   S   V+  T ++
Sbjct: 25  HALKHDHHQFDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVAL 84

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            LKAC   + L  G  IH  A+ + +   + V ++++ MYCK G    A   F  +    
Sbjct: 85  SLKACQGESKL--GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPD 142

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC--HAGLV--REAR 599
           +  WN ++ G+ +     +  N    M   G+  D +TY + L  C   H  L   +   
Sbjct: 143 IVSWNTVLSGFEESV---DALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHS 199

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             + C     GL  ++     +V +  R G+L+ A+   D+MP   D   W +++S 
Sbjct: 200 LVVKC-----GLGCEVFIGNALVTMYSRWGMLDEARRVFDEMP-ERDLVSWNAMISG 250


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 207/685 (30%), Positives = 348/685 (50%), Gaps = 21/685 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFS---SLVKACGSLQENE--IVHGVCLKLGFSSRVYLVSGF 119
           AL++++ +    +RPD  TF        A  +  E++   +H   L+ G  + V+  +  
Sbjct: 101 ALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTL 160

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  YA  G+   A   F +  + D V++ ++V  ++ NG F  ++   V M   G  LN 
Sbjct: 161 VAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNV 220

Query: 180 FSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            SL +V+   G   + K G  IH   VKVG  + V  +L NA++++Y + G    ++++F
Sbjct: 221 ASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMV--NLANALVDMYGKFGDVEASMQVF 278

Query: 237 DEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D + E + VSW+  I    +     +   +F+ +  ++      T+ +LL ++       
Sbjct: 279 DGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFD 338

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+++  +  K      + + N+L+ MY K G +  A +IF+ +  ++ VSWN+MIA   
Sbjct: 339 LGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLV 398

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG   +A  +   M +    PN  T+ ++L A +   SLK   Q+H+  I+ G + D  
Sbjct: 399 QNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLF 458

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA--EALELYRTIWG 471
           + + LI  Y KC  L+ ++ +  E  +K+ V  N L  +L Y+      E+L L++ +  
Sbjct: 459 ISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTL--ILGYSQSPWCFESLLLFKQMRS 515

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + +  +F   L AC  ++  + GK IHC+ ++       F+ ++++D+Y K G +  
Sbjct: 516 VGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVT 575

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A + F KI +  +A WN M++GY  HG       LF  M   G+  D ++Y+AVL +C H
Sbjct: 576 ASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSH 635

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV + + Y S M     + PQ  HYAC+VDLLGR G L      I  MP P ++ +W 
Sbjct: 636 GGLVDKGKKYFSQMV-AQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWG 694

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC I+GNI+L   A   L EL+P++   Y L+ N+YA  G WN+  K+RK MK + 
Sbjct: 695 ALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRK 754

Query: 712 LCKEPGYSWI--HVGGYTHHFYAGD 734
           + K P YSW+    G     F  GD
Sbjct: 755 VQKNPAYSWVQDQDGNKLQAFLVGD 779



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/576 (23%), Positives = 276/576 (47%), Gaps = 29/576 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           ++++  ++ GH  D     TL++ +    K  D RR F    +   RD++++N+L+S   
Sbjct: 140 ELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFD---EMPERDVVSWNSLVSAFL 196

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
                  A +    +   G   +  +  S+V ACG+ QE +    +H + +K+G ++ V 
Sbjct: 197 VNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVN 256

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  ++ Y K G++ ++   F   L+ + V++ + +  ++  G +     +F +M    
Sbjct: 257 LANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHN 316

Query: 175 LELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           +     +L+++L A     SFD+  G ++HG+ +K      +   + N+++++Y + G  
Sbjct: 317 VMPGSITLSSLLPALVELGSFDL--GREVHGYSIKRAMDLDI--FVANSLVDMYAKFGSL 372

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +F+++ + +VVSW+  IA         EAF L  D++ +    N  T++N+L + 
Sbjct: 373 EKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPAC 432

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L+ GKQI A+  + G M  + I NALI MY KCGQ++ AR+IF+    KD VS+N
Sbjct: 433 ARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYN 491

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++I GYS++ +  ++L +F  M    +  +  +    L A +N    K   ++H  +++ 
Sbjct: 492 TLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRR 551

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---AL 463
                  + + L+  Y K   L  + ++ ++I KK+    N +  +L Y   H +   A 
Sbjct: 552 LLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTM--ILGYG-MHGQIDIAF 608

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           EL+  + G   + +  ++  VL AC+    +++GK      +    +      + ++D+ 
Sbjct: 609 ELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLL 668

Query: 524 CKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
            + G +       R +   + +  W A++     HG
Sbjct: 669 GRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHG 704



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 192/392 (48%), Gaps = 21/392 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   IK    LD  ++ +L+  + KF    +A       ++R+++++NA+I+ L +  
Sbjct: 342 EVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG 401

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A +L   ++  G  P++ T  +++ AC    SL+  + +H   ++ G    +++ +
Sbjct: 402 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 461

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G++  A   F    + D+V+Y  ++ GY  +    +S  +F +MRS+G++ 
Sbjct: 462 ALIDMYSKCGQLSLARNIFERS-EKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 520

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S    L A  ++   K G++IH   V+   LSG    L+N++++LY + G  + A K
Sbjct: 521 DAVSFMGALSACTNLSVFKHGKEIHCVLVR-RLLSG-HPFLSNSLLDLYTKGGMLVTASK 578

Query: 235 MFDEITEPDVVSWSERIAAACDGVE-----AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F++IT+ DV SW+  I     G+      AF LF+ ++ +    +  + I +L++    
Sbjct: 579 IFNKITKKDVASWNTMILGY--GMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHG 636

Query: 290 RILRAGKQIQAFCYKVG-FMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
            ++  GK+   F   V   +E   +  A ++ + G+ GQ++    I   + F  +S  W 
Sbjct: 637 GLVDKGKKY--FSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWG 694

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +++     +G    A     H+ E     +GY
Sbjct: 695 ALLGACRIHGNIELAQWAAEHLFELKPEHSGY 726


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/716 (29%), Positives = 365/716 (50%), Gaps = 16/716 (2%)

Query: 42  QNRDIITYNALISGL-ARFCQSGPALK-LFDRLRYQGL-RPDAFTFSSLVKAC---GSLQ 95
           ++R ++   + I+GL +R   +  AL+ L D L    L + D++  +  ++ C   G  +
Sbjct: 3   RSRSLLPTFSQINGLLSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDAR 62

Query: 96  ENEIVHGVCLKLGFSSRV--YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
               VH   ++ G  +++  +  +  +  YAK G + +A   F    + + V++  ++ G
Sbjct: 63  AGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQG 122

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSG 210
           Y   GEF+++ E+F  ++  G E+N F LT +L     +        IH    K+G    
Sbjct: 123 YALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRN 182

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACDGVE-AFGLFKDL 267
               +  A+++ Y  CG    A  +FD I   D V+W+  ++  +  D  E A   F  +
Sbjct: 183 A--FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKM 240

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           R   F+ N + + + L +         GK I     K  +     +G AL+ MY KCG +
Sbjct: 241 RMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDI 300

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            DA +IF+ +   D + W+ +I+ Y+++    QA +MF  M+   ++PN ++++ +L+A 
Sbjct: 301 EDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQAC 360

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +N   L+   Q+H+  IK G+  +  + + L+  Y KC  +  S  + S +   N V  N
Sbjct: 361 ANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWN 420

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            +      +    +AL ++  +  +       TFS VL+ACA  + ++    IH L  K+
Sbjct: 421 TIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKS 480

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            ++ D  V +++ID Y KCG I DA + F  I    +  WN+++  YA HG       LF
Sbjct: 481 TFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELF 540

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           ++M+K  +K +++T++++L+ C   GLV +     + M   H + P +EHY CIV LLGR
Sbjct: 541 DRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGR 600

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L  A   I  +P  P   +W++LLS+C ++ N+ LG  A  K+L+++P +E+TYVLL
Sbjct: 601 AGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLL 660

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           SN+YA+AG+ ++V   RK M+   + KE G SW+ + G  H F  G + H   + I
Sbjct: 661 SNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRII 716



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 198/408 (48%), Gaps = 25/408 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   +K  +  +P +   L+  + K  D   A        + D+I ++ LIS  A+ CQ
Sbjct: 271 IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQ 330

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           +  A ++F R+    + P+ F+ S +++AC +   L+  E +H + +KLG+ S +++ + 
Sbjct: 331 NEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNA 390

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK   + ++   F    D + V++  ++ GY  +G  + +  VF EMR+  +   
Sbjct: 391 LMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLST 450

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAV 233
           + + ++VL A   +  +K   QIH    K  F +   VCN L    ++ Y +CG   DA+
Sbjct: 451 QVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSL----IDTYAKCGFIRDAL 506

Query: 234 KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+F+ I E DVVSW+  I+A A  G    A  LF  +  +D + N+ T ++LLS  G   
Sbjct: 507 KVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTG 566

Query: 291 ILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSM 348
           ++  G  +  +          +     ++ + G+ G++ DA + I D       + W ++
Sbjct: 567 LVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRAL 626

Query: 349 IAG--YSEN---GFF--NQALDMFCH-MLEFSLIPNGYTMASILEAVS 388
           ++     +N   G +   + LD+  H    + L+ N Y  A IL+ V+
Sbjct: 627 LSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVA 674



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 15/297 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L IK G+  +  +   L+  + K  +   +       Q+ + +++N +I G   +C
Sbjct: 371 QIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVG---YC 427

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
           QSG    AL +F  +R   +     TFSS+++AC    S++    +H +  K  F++   
Sbjct: 428 QSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTI 487

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ YAK G I  A   F   ++ D V++ +++  Y  +G    + E+F  M    
Sbjct: 488 VCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSD 547

Query: 175 LELNE---FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ N+    SL +V G++  V +G  +    +    +     H    I+ L  R G+  D
Sbjct: 548 IKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHY-TCIVRLLGRAGRLTD 606

Query: 232 AVKMFDEI-TEPDVVSWSERIAA-ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           A+K   +I + P  + W   +++       A G +   +  D + ++ T   LLS++
Sbjct: 607 ALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNM 663


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/577 (32%), Positives = 314/577 (54%), Gaps = 11/577 (1%)

Query: 165 EVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           EV+ +M  +G+  ++ +   VL A   +F+V++G ++HG  VK+GF S V   + N +++
Sbjct: 27  EVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDV--FVGNTLLS 84

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG---VEAFGLFKDLRFNDFQINEY 277
            Y  CG   DA ++FDE+ E D+VSW+  I   + +G    +A  +F+ +     + N  
Sbjct: 85  FYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSI 144

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ + L  +      +AG+++     ++G    + I N+LI MY K G   +A ++F  L
Sbjct: 145 TISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKL 204

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             K+ VSWN+MIA +++N F   A+ +   M ++  +PN  T  ++L A +    ++   
Sbjct: 205 DAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGK 264

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           ++H+  I  G   D  + + L   Y K   L  ++ V  +   ++ V  N L       S
Sbjct: 265 EIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHSQTS 323

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
             +E+L L+  +     + +  +F   L ACA +T ++QGK IH   L+  +   +FV +
Sbjct: 324 DCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVAN 383

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           +++D Y KCG I  A+  F ++    +A WN M++GY   G      +LF  M K  V+ 
Sbjct: 384 SLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEY 443

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D ++++AVL++C H GL+ + R Y   +    G+ P   HYAC+VDLLGR GL+E A   
Sbjct: 444 DSVSFIAVLSACSHGGLLEKGRKYFDELK-ARGIEPTQMHYACMVDLLGRAGLMEEAAEL 502

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           I  +PI PDA+IW +LL AC IYGN++L   A   L EL+P++   Y LLSN+YA  G W
Sbjct: 503 IKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRW 562

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           ++  ++R+ MK + + K PG SW+ +G   H F  G+
Sbjct: 563 DEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGE 599



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 247/497 (49%), Gaps = 20/497 (4%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCL 105
           +N LI G +     G  L++++++   G+RPD  TF  ++KAC     +++   VHG  +
Sbjct: 10  WNTLIRGYS-IAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG-EFDKSK 164
           KLGF S V++ +  +  Y   G +  A   F +  + D V++  M+  +  NG  +  + 
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           ++F  M   GL+ N  ++++ L    ++   K G ++HG  +++G  S +   + N++++
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDI--FIANSLID 186

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYT 278
           +Y + G   +A  +F ++   +VVSW+  IA        + A GL + ++      N  T
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVT 246

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
             N+L +     ++R GK+I A    +G    + + NAL  MY K G +  AR++FD  +
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSL 306

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D VS+N +I G+S+    +++L +F  M    L  +  +    L A +N  ++KQ  +
Sbjct: 307 -RDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H  +++  F +   + + L+  Y KC  +  ++ +   +  K+    N +  +L Y   
Sbjct: 366 IHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTM--ILGYGML 423

Query: 459 HA--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
                A++L+  +     E +  +F  VL AC+    LE+G+  +   LKAR  +   + 
Sbjct: 424 GELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRK-YFDELKARGIEPTQMH 482

Query: 517 SA-VIDMYCKCGTIEDA 532
            A ++D+  + G +E+A
Sbjct: 483 YACMVDLLGRAGLMEEA 499



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 214/449 (47%), Gaps = 21/449 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  ++K G   D  +  TL+S +      R A R   +   +D++++N +I     F 
Sbjct: 62  EVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMI---GVFS 118

Query: 61  QSG----PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRV 113
            +G     AL +F  +  +GL+P++ T SS +     L+       VHG  +++G  S +
Sbjct: 119 VNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDI 178

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           ++ +  I+ YAKSG    A   F   LD  N V++ AM+  +  N     +  +  +M+ 
Sbjct: 179 FIANSLIDMYAKSGHSTEASNVFYK-LDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQD 237

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G   N  + T VL A      V+ G++IH   + +G    +   ++NA+ ++Y + G  
Sbjct: 238 YGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDL--FVSNALTDMYAKSGHL 295

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +FD  +  D VS++  I   +   D  E+  LF +++    + +  + +  LS+ 
Sbjct: 296 KLARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSAC 354

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                ++ GK+I  F  +  F   + + N+L+  Y KCG++  AR+IFD +  KD  SWN
Sbjct: 355 ANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWN 414

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI GY   G  + A+D+F +M +  +  +  +  ++L A S+   L++  +    +   
Sbjct: 415 TMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR 474

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVL 435
           G        +C++   G+   + E+  ++
Sbjct: 475 GIEPTQMHYACMVDLLGRAGLMEEAAELI 503



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 138/271 (50%), Gaps = 8/271 (2%)

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN++I GYS  G     L+++  M+   + P+ +T   +L+A +++  +++  +VH  ++
Sbjct: 10  WNTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH-AEAL 463
           K GF  D  + + L++ YG C  L ++ RV  E+ +K+ V  N +  V      H  +AL
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           +++R +     + N  T S  L     +   + G+ +H  +++   + DIF+ +++IDMY
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            K G   +A   F K+   ++  WNAM+  +AQ+        L  +M  +G  P+ +T+ 
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248

Query: 584 AVLTSCCHAGLVREAR------TYLSCMSDL 608
            VL +C   GLVR  +       ++ C  DL
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAFDL 279


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 225/755 (29%), Positives = 360/755 (47%), Gaps = 90/755 (11%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLG--------------------FSSRVYLVSGFIENY 123
           F+SL+K C S+     +H   +  G                    + S   L +G + +Y
Sbjct: 34  FASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASY 93

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
              G    A            V +  +V  ++  G  D++  V   M   G + + F+L 
Sbjct: 94  LACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLP 153

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
             L A  ++     G  +HG     GF S V   + NA++ +Y RCG   DA  +FDEIT
Sbjct: 154 YALKACGELPSYCCGRALHGLICCNGFESNV--FVCNALVAMYSRCGSLEDASLVFDEIT 211

Query: 241 EP---DVVSWSERIAAACDGVE---AFGLFKDLRF--NDFQINE----YTMINLLSSVGG 288
                DV+SW+  +AA   G     A  LF ++    ++   NE     +++N+L +   
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACAS 271

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + L   K+I ++  + G      + NALI  Y KCG +NDA  +F+ + FKD VSWN+M
Sbjct: 272 LKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAM 331

Query: 349 IAGYSENGFF-----------------------------------NQALDMFCHMLEFSL 373
           + GY+++G F                                    +ALD F  M+    
Sbjct: 332 VTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGS 391

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL------------LDDSMISCLITT 421
            PN  T+ S+L A ++  +L Q M++H++ +K   L             D  + + LI  
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451

Query: 422 YGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALELYRTIWGSCREV--N 477
           Y KC +   ++ +   I +  +N V    +           +AL+++  +      V  N
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPN 511

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQDI-FVESAVIDMYCKCGTIEDAKRA 535
             T S +L ACA +  L  GK IH    +   Y+  + FV + +IDMY KCG ++ A+  
Sbjct: 512 AYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNV 571

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F  + + +   W +MM GY  HG   E  ++F+KM K G  PD+I++L +L +C H+G+V
Sbjct: 572 FDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMV 631

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            +   Y   M   + ++   EHYAC++DLL R G L+ A  TI +MP+ P A IW +LLS
Sbjct: 632 DQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLS 691

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC ++ N++L   A +KL+ ++ +N+ +Y L+SN+YA+A  W DV ++R+ MK+  + K 
Sbjct: 692 ACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKR 751

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           PG SW+     T  F+ GD SH  S EIY  L +L
Sbjct: 752 PGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 152/641 (23%), Positives = 279/641 (43%), Gaps = 87/641 (13%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L T +++ +      + A   L        + +N L+    +      A+ +  R+   G
Sbjct: 85  LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144

Query: 77  LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            +PD FT    +KACG L        +HG+    GF S V++ +  +  Y++ G +  A 
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204

Query: 134 MCF----RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--LNE----FSLT 183
           + F    R  +D D +++ ++V  +V       + E+F EM  +  E   NE     S+ 
Sbjct: 205 LVFDEITRKGID-DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIV 263

Query: 184 AVLGASFDVK---EGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
            +L A   +K   + ++IH + ++ G  +   VC    NA+++ Y +CG   DAVK+F+ 
Sbjct: 264 NILPACASLKALPQIKEIHSYAIRNGTFADAFVC----NALIDTYAKCGSMNDAVKVFNV 319

Query: 239 ITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQI--------------------- 274
           +   DVVSW+  +           AF LF+++R  +  +                     
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379

Query: 275 --------------NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV---------- 310
                         N  T+I+LLS+      L  G +I A+  K   + +          
Sbjct: 380 LDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439

Query: 311 --VSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIAGYSENGFFNQALDMFC 366
             + + NALI MY KC     ARSIFD +  ++   V+W  MI GY++ G  N AL +F 
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499

Query: 367 HML--EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS--MISCLITTY 422
            M+   +++ PN YT++ IL A ++  +L+   Q+H+++ +          + +CLI  Y
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMY 559

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  ++ ++ V   + K+N V   ++ S         EAL+++  +  +    +  +F 
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKCGTIEDAKRAFRK 538
           ++L AC+    ++QG     +    R D D+       + VID+  +CG ++ A +  ++
Sbjct: 620 VLLYACSHSGMVDQGLNYFDI---MRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQE 676

Query: 539 ICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +  +  A  W A++     H          NK+     + D
Sbjct: 677 MPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAEND 717



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 231/509 (45%), Gaps = 74/509 (14%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLA 57
           ++ L+  NG   +  +   L++ +++      A   +FD   R    D+I++N++++   
Sbjct: 171 LHGLICCNGFESNVFVCNALVAMYSRCGSLEDA-SLVFDEITRKGIDDVISWNSIVAAHV 229

Query: 58  RFCQSGPALKLFDRL------RYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLG 108
           +      AL+LF  +      +    R D  +  +++ AC SL+   + + +H   ++ G
Sbjct: 230 KGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNG 289

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
             +  ++ +  I+ YAK G +  A   F      D V++ AMV GY  +G F  + E+F 
Sbjct: 290 TFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFE 349

Query: 169 EMRSLGLELNEFSLTAVLGA---------SFD---------------------------- 191
            MR   + L+  + +AV+           + D                            
Sbjct: 350 NMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLG 409

Query: 192 -VKEGEQIHGFGVKVGFLSGVCNH----------LNNAIMNLYVRCGQKLDAVKMFDEIT 240
            + +G +IH + +K   LS   +           + NA++++Y +C     A  +FD I 
Sbjct: 410 ALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIP 469

Query: 241 --EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILR 293
             E +VV+W+  I   A   D  +A  +F ++    + +  N YT+  +L +      LR
Sbjct: 470 RRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALR 529

Query: 294 AGKQIQAFCYKVGFME--VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            GKQI A+  +    E  V  + N LI MY KCG V+ AR++FD +  ++ VSW SM++G
Sbjct: 530 MGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG 589

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF--L 409
           Y  +G   +ALD+F  M +   +P+  +   +L A S+S  + Q +  +  I++  +  +
Sbjct: 590 YGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLN-YFDIMRRDYDVV 648

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
                 +C+I    +C  L+++ + + E+
Sbjct: 649 ASAEHYACVIDLLARCGRLDKAWKTIQEM 677



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 93/437 (21%), Positives = 194/437 (44%), Gaps = 54/437 (12%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR-----DIITYNALISGLARFCQSGPALKL 68
           D +    +++ +T+  +F  AF  LF+   +     D+IT++A+I+G A+   S  AL  
Sbjct: 324 DVVSWNAMVTGYTQSGNFGAAFE-LFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382

Query: 69  FDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS------------RV 113
           F ++   G  P++ T  SL+ AC   G+L +   +H   LK    S             +
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN--VAYTAMVCGYVWNGEFDKSKEVFVEM- 170
            + +  I+ Y+K     +A   F      +   V +T M+ GY   G+ + + ++F EM 
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502

Query: 171 -RSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
            +   +  N ++++ +L A      ++ G+QIH +  +          + N ++++Y +C
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
           G    A  +FD + + + VSW+  ++       G EA  +F  ++   F  ++ + + LL
Sbjct: 563 GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGN---ALISMYGKCGQVNDA-RSIFDYLIF 339
            +     ++  G  +  F       +VV+       +I +  +CG+++ A ++I +  + 
Sbjct: 623 YACSHSGMVDQG--LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPME 680

Query: 340 KDSVSWNSMIAG---YSENGFFNQALDMFCHML-----EFSLIPNGYTMASILEAVSNSK 391
             +V W ++++    +S       AL+   +M       ++LI N Y         +N++
Sbjct: 681 PSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIY---------ANAR 731

Query: 392 SLKQAMQVHSHIIKSGF 408
             K   ++   + KSG 
Sbjct: 732 RWKDVARIRQLMKKSGI 748


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 225/757 (29%), Positives = 379/757 (50%), Gaps = 73/757 (9%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFD 70
           H + +   ++IS F K      A R LFD    R+I+++N++I+      +   A +LFD
Sbjct: 43  HKNTVTHNSMISAFAKNGRISDA-RQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFD 101

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           ++  +    D ++++ ++       E      +   L +       +  +  YAK+ +  
Sbjct: 102 KMPTR----DLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFD 157

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLGLELNEFSLTAV 185
            A   F      D V++ +M+ GY  NGE     + F EM      S  L ++ F     
Sbjct: 158 EARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGD 217

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
           L +S++    E+I      V +++ +C          + R G+  +A ++FD++   +VV
Sbjct: 218 LNSSWEF--FEKIPNPNT-VSWVTMLCG---------FARFGKIAEARRLFDQMPIRNVV 265

Query: 246 SWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +W+  IAA    C   EA  LF ++   +  I+  T+IN    +G  ++  A + +    
Sbjct: 266 AWNAMIAAYVQNCHVDEAISLFMEMPEKN-SISWTTVINGYVRMG--KLDEARQLLNQMP 322

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
           Y+      V+   A+IS Y +  +++DAR IF+ +  +D V WN+MIAGYS+ G  ++AL
Sbjct: 323 YRN-----VAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEAL 377

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  M++  ++                                         + ++ +Y
Sbjct: 378 HLFKQMVKKDIVS---------------------------------------WNTMVASY 398

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            +   ++ + ++  E+ +KN V  N+L S L     + +AL+ +  +    ++ + STF+
Sbjct: 399 AQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFA 458

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
             L +CA +  L+ GK +H L +K+ Y  D+FV +A+I MY KCG+I  A+  F+ I   
Sbjct: 459 CGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHF 518

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +  WN+++  YA +G   E   LF+KM   GV PDE+T++ +L++C H GL+ +     
Sbjct: 519 DVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLF 578

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
            CM   + + P  EHYAC+VDLLGR G LE A   +  M I  +A IW +LL AC I+GN
Sbjct: 579 KCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGN 638

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           ++L   A  KLLE +P   S YVLLSN+ A AG W++V ++R+ MKEK   K+PG+SWI 
Sbjct: 639 LELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIE 698

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
           +    H F + D +H ++ E+   L  L  HM  TAK
Sbjct: 699 LQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAK 735



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/431 (20%), Positives = 183/431 (42%), Gaps = 67/431 (15%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  I+  GK GQ+++A  +F ++  K++V+ NSMI+ +++NG  + A  +F  M + +++
Sbjct: 19  NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV 78

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC----------------- 417
               +  S++ A  ++  +++A Q+   +          MI+C                 
Sbjct: 79  ----SWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL 134

Query: 418 -----------LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
                      ++  Y K    +E++R+   +  K+ V  N++ +           L+ +
Sbjct: 135 PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFF 194

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV--IDMYC 524
             +     E +  ++++++     + DL              + + I   + V  + M C
Sbjct: 195 EEM----AERDVVSWNLMVDGFVEVGDLNSS---------WEFFEKIPNPNTVSWVTMLC 241

Query: 525 ---KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
              + G I +A+R F ++   ++  WNAM+  Y Q+    E  +LF +M     + + I+
Sbjct: 242 GFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNSIS 297

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV--GLLEGAKMTID 639
           +  V+      G + EAR  L+ M       P     A    + G V    ++ A+   +
Sbjct: 298 WTTVINGYVRMGKLDEARQLLNQM-------PYRNVAAQTAMISGYVQNKRMDDARQIFN 350

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           Q+ I  D   W ++++  +  G +D  L    ++++    + +T V     YA  G  + 
Sbjct: 351 QISI-RDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVA---SYAQVGQMDA 406

Query: 700 VGKLRKEMKEK 710
             K+ +EMKEK
Sbjct: 407 AIKIFEEMKEK 417



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 50/91 (54%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L++K+G+  D  +S  LI+ + K      A     D  + D++++N+LI+  A   
Sbjct: 475 QLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNG 534

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               ALKLF ++  +G+ PD  TF  ++ AC
Sbjct: 535 NGREALKLFHKMEVEGVAPDEVTFVGILSAC 565


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 195/609 (32%), Positives = 330/609 (54%), Gaps = 12/609 (1%)

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVG 206
           MV G+   G++      F E+   G   + ++L  V+ A  D+K    G  IH    K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACDGV-EAFGL 263
               + + +  A++++YV+C +  DA  +FD++ E D+V+W+  I   A C    E+  L
Sbjct: 61  L--DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 118

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           F+ +R      ++  M+ ++ +      +   + I  +  +  F   V +G A+I MY K
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           CG V  AR IFD +  K+ +SW++MIA Y  +G   +ALD+F  ML   ++P+  T+AS+
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L A S+ K+L+    +H  + K G  LD  + + L+  YGKC  + +++ +  ++ +++ 
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298

Query: 444 VHINALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           V    +  +  YA C    E+L L+  +       +      V+ ACA +  + + + I 
Sbjct: 299 VTWTVM--IGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 356

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
               + ++  D+ + +A+IDM+ KCG +E A+  F ++   ++  W+AM+  Y  HG   
Sbjct: 357 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 416

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           +  +LF  M + G+ P++IT +++L +C HAGLV E   + S M + + +   ++HY C+
Sbjct: 417 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV 476

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           VDLLGR G L+ A   I+ M +  D  +W + L AC  + ++ L   A + LLELQP N 
Sbjct: 477 VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNP 536

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSK 741
             Y+LLSN+YA+AG W DV K R  M ++ L K PG++WI V   +H F  GD++H +SK
Sbjct: 537 GHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSK 596

Query: 742 EIYKELIKL 750
           EIY+ L  L
Sbjct: 597 EIYEMLKSL 605



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 235/448 (52%), Gaps = 14/448 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           I+ ++ K G  LD  +   L+  + K  +   A RFLFD  Q RD++T+  +I G A   
Sbjct: 52  IHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA-RFLFDKMQERDLVTWTVMIGGYAECG 110

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  +L LF+++R +G+ PD     ++V AC   G++ +  I+     +  F   V L +
Sbjct: 111 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 170

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G + SA   F    + + ++++AM+  Y ++G+  K+ ++F  M S G+  
Sbjct: 171 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLP 230

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +L ++L A  D+K    G  IH    K G    + + +  A++++Y +C +  DA  
Sbjct: 231 DKITLASLLYACSDLKNLQMGRLIHHIVYKFGL--DLDHFVCAALVDMYGKCREIEDARF 288

Query: 235 MFDEITEPDVVSWSERIA--AAC-DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD++ E D+V+W+  I   A C +  E+  LF  +R      ++  M+ ++ +      
Sbjct: 289 LFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGA 348

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +   + I  +  +  F   V +G A+I M+ KCG V  AR IFD +  K+ +SW++MIA 
Sbjct: 349 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAA 408

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           Y  +G   +ALD+F  ML   ++PN  T+ S+L A S++  +++ ++  S + +      
Sbjct: 409 YGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRA 468

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEI 438
           D    +C++   G+   L+E+ +++  +
Sbjct: 469 DVKHYTCVVDLLGRAGRLDEALKLIESM 496



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 247/517 (47%), Gaps = 13/517 (2%)

Query: 52  LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLG 108
           ++ G A+          F  L   G RPD +T   +++AC    +LQ   ++H +  K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
                ++ +  ++ Y K  EI  A   F    + D V +T M+ GY   G+ ++S  +F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 169 EMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +MR  G+  ++ ++  V+ A   +    +   I  +  +  F   V   L  A++++Y +
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI--LGTAMIDMYAK 178

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           CG    A ++FD + E +V+SWS  IAA      G +A  LF+ +  +    ++ T+ +L
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +    + L+ G+ I    YK G      +  AL+ MYGKC ++ DAR +FD +  +D 
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           V+W  MI GY+E G  N++L +F  M E  ++P+   M +++ A +   ++ +A  +  +
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           I +  F LD  + + +I  + KC  +  ++ +   +++KN +  +A+ +   Y     +A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVID 521
           L+L+  +  S    N  T   +L AC+    +E+G     L  +      D+   + V+D
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
           +  + G +++A +    +  +   G W A +     H
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTH 515


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 212/653 (32%), Positives = 338/653 (51%), Gaps = 68/653 (10%)

Query: 170 MRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M   G  L+ F+L  VL A  ++     G   HG     GF S V   + NA++ +Y RC
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV--FICNALVAMYSRC 58

Query: 227 GQKLDAVKMFDEITE---PDVVSWSERIAA---ACDGVEAFGLFKDLRF--NDFQINE-- 276
           G   +A  +FDEIT+    DV+SW+  ++A   + +   A  LF  +    ++   NE  
Sbjct: 59  GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERS 118

Query: 277 --YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
              +++N+L + G  + +   K++     + G    V +GNALI  Y KCG + +A  +F
Sbjct: 119 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 178

Query: 335 DYLIFKDSVSWNSMIAGYSENGFF-----------------------------------N 359
           + + FKD VSWN+M+AGYS++G F                                   +
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL--------- 410
           +AL++F  M+    +PN  T+ S+L A ++  +  Q M++H++ +K+  L          
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 411 DDSMI-SCLITTYGKCNALNESKRVLSEI--DKKNAVHINALASVLVYASCHAEALELYR 467
           +D M+ + LI  Y KC +   ++ +  +I  +++N V    +           +AL+L+ 
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 468 TIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDI-FVESAVIDMY 523
            +      V  N  T S +L ACA +  +  GK IH   L+  +YD    FV + +I+MY
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG ++ A+  F  + + S   W +MM GY  HG   E  ++F+KM K G  PD+IT+L
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 478

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            VL +C H G+V +  +Y   MS  +GL P+ EHYA  +DLL R G L+ A  T+  MP+
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 538

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
            P A +W +LLSAC ++ N++L   A +KL+E+  +N+ +Y L+SN+YA+AG W DV ++
Sbjct: 539 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 598

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           R  MK+  + K PG SW+     T  F+ GD SH  S +IY  L  L + + A
Sbjct: 599 RHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKA 651



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 138/576 (23%), Positives = 261/576 (45%), Gaps = 77/576 (13%)

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G R D FT   ++KACG L         HG+    GF S V++ +  +  Y++ G +  A
Sbjct: 5   GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 133 EMCFRDCLDL---DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--LNEFS------ 181
            M F +       D +++ ++V  +V +     + ++F +M  +  E   NE S      
Sbjct: 65  SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 124

Query: 182 -LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            +    G+   V + +++HG  ++ G    V   + NA+++ Y +CG   +AVK+F+ + 
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDV--FVGNALIDAYAKCGLMENAVKVFNMME 182

Query: 241 EPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQI----------------------- 274
             DVVSW+  +A    + +   AF LFK++R  +  +                       
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242

Query: 275 ------------NEYTMINLLSSVGGERILRAGKQIQAFCYKV----------GFMEVVS 312
                       N  T+I++LS+         G +I A+  K           G  E + 
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 302

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIF--KDSVSWNSMIAGYSENGFFNQALDMFCHML- 369
           + NALI MY KC     ARSIFD +    ++ V+W  MI G+++ G  N AL +F  M+ 
Sbjct: 303 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 362

Query: 370 -EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS---MISCLITTYGKC 425
             + + PN YT++ IL A ++  +++   Q+H+++++     D S   + +CLI  Y KC
Sbjct: 363 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH-HQYDSSAYFVANCLINMYSKC 421

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             ++ ++ V   + +K+A+   ++ +        +EAL+++  +  +    +  TF +VL
Sbjct: 422 GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 481

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDS 543
            AC+    ++QG + +  ++ A Y      E  +  ID+  + G ++ A +  + +  + 
Sbjct: 482 YACSHCGMVDQGLS-YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEP 540

Query: 544 LA-GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
            A  W A++     H       +  NK+ +   + D
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 576



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 212/463 (45%), Gaps = 67/463 (14%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR---DIITYNALISGLARF 59
           + L+  NG   +  +   L++ +++      A     +   R   D+I++N+++S   + 
Sbjct: 33  HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 92

Query: 60  CQSGPALKLFDRL------RYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFS 110
             +  AL LF ++      +    R D  +  +++ ACGSL+   + + VHG  ++ G  
Sbjct: 93  SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 152

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             V++ +  I+ YAK G + +A   F      D V++ AMV GY  +G F  + E+F  M
Sbjct: 153 LDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNM 212

Query: 171 RSLGLELNEFSLTAVL------GASFDV-------------------------------- 192
           R   + L+  + TAV+      G S +                                 
Sbjct: 213 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAF 272

Query: 193 KEGEQIHGFGVKVGFLS------GVCNHL--NNAIMNLYVRCGQKLDAVKMFDEIT--EP 242
            +G +IH + +K   L+      G    L   NA++++Y +C     A  +FD+I   E 
Sbjct: 273 SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 332

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQ 297
           +VV+W+  I   A   D  +A  LF ++    + +  N YT+  +L +      +R GKQ
Sbjct: 333 NVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQ 392

Query: 298 IQAFCYKVGFMEVVS--IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           I A+  +    +  +  + N LI+MY KCG V+ AR +FD +  K ++SW SM+ GY  +
Sbjct: 393 IHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 452

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           G  ++ALD+F  M +   +P+  T   +L A S+   + Q + 
Sbjct: 453 GRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 495



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 1   QIYSLLIKNGHHLDP---ILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGL 56
           QI++ ++++ H  D     ++  LI+ ++K  D   A R +FD+ + +  I++ ++++G 
Sbjct: 392 QIHAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDTA-RHVFDSMSQKSAISWTSMMTGY 449

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               +   AL +FD++R  G  PD  TF  ++ AC
Sbjct: 450 GMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 484


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 221/712 (31%), Positives = 370/712 (51%), Gaps = 24/712 (3%)

Query: 59  FCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSR 112
            C +G    A+KL + ++   +  D   F +LV+ C    + +E   V+ + L    S  
Sbjct: 69  LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V L + F+  + + G +V A   F    + +  ++  +V GY   G FD++  ++  M  
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188

Query: 173 LG-LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           +G ++ + ++   VL   G   D+  G+++H   V+ G+   +   + NA++ +YV+CG 
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDI--DVVNALITMYVKCGD 246

Query: 229 KLDAVKMFDEITEPDVVSWSERIAA-----AC-DGVEAFGLFKDLRFNDFQINEYTMINL 282
              A  +FD +   D++SW+  I+       C +G+E F   + L  +   +   ++I+ 
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
              +G  R+   G+ I A+    GF   +S+ N+L  MY   G   +A  +F  +  KD 
Sbjct: 307 CELLGDRRL---GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSW +MI+GY  N   ++A+D +  M + S+ P+  T+A++L A +    L   +++H  
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            IK+  +    + + LI  Y KC  ++++  +   I +KN +   ++ + L   +   EA
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L   R +  + +  N  T +  L ACA +  L  GK IH   L+     D F+ +A++DM
Sbjct: 484 LIFLRQMKMTLQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDM 542

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y +CG +  A   F    +D +  WN ++ GY++ G    V  LF++M K  V+PDEIT+
Sbjct: 543 YVRCGRMNTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITF 601

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +++L  C  + +VR+   Y S M D +G+ P L+HYAC+VDLLGR G L+ A   I +MP
Sbjct: 602 ISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           + PD  +W +LL+AC I+  IDLG L+   + EL   +   Y+LL NLYA  G W +V K
Sbjct: 661 VTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAK 720

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +R+ MKE  L  + G SW+ V G  H F + D  H Q+KEI   L   YE M
Sbjct: 721 VRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 225/432 (52%), Gaps = 8/432 (1%)

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-ASFDVKEGEQIHGFGVKVGFLSGV 211
           G   NG+ +++ ++   M+ L + ++E    A++    +   + E    + + +  +S +
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF-KDL 267
              L NA + ++VR G  +DA  +F +++E ++ SW+  +   A  G   EA  L+ + L
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                + + YT   +L + GG   L  GK++     + G+   + + NALI+MY KCG V
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
             AR +FD +  +D +SWN+MI+GY ENG  ++ L++F  M   S+ P+  T+ S++ A 
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
                 +    +H+++I +GF +D S+ + L   Y    +  E++++ S +++K+ V   
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            + S   Y     +A++ YR +     + +  T + VL ACA + DL+ G  +H LA+KA
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA-QHGCYHEVSNL 566
           R    + V + +I+MY KC  I+ A   F  I R ++  W +++ G    + C+  +  +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL--I 485

Query: 567 FNKMSKFGVKPD 578
           F +  K  ++P+
Sbjct: 486 FLRQMKMTLQPN 497



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 214/447 (47%), Gaps = 13/447 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +++  +++ G+ LD  +   LI+ + K  D + A R LFD    RDII++NA+ISG    
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA-RLLFDRMPRRDIISWNAMISGYFEN 275

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                 L+LF  +R   + PD  T +S++ AC  L +  +   +H   +  GF+  + + 
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +   + Y  +G    AE  F      D V++T M+ GY +N   DK+ + +  M    ++
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +E ++ AVL A     D+  G ++H   +K   +S V   + N ++N+Y +C     A+
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI--VANNLINMYSKCKCIDKAL 453

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI-- 291
            +F  I   +V+SW+  IA        F     LR     +    +    +     RI  
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGA 513

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK+I A   + G      + NAL+ MY +CG++N A S F+    KD  SWN ++ G
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTG 572

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YSE G  +  +++F  M++  + P+  T  S+L   S S+ ++Q +   S +   G   +
Sbjct: 573 YSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPN 632

Query: 412 DSMISCLITTYGKCNALNESKRVLSEI 438
               +C++   G+   L E+ + + ++
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKM 659


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 222/683 (32%), Positives = 352/683 (51%), Gaps = 17/683 (2%)

Query: 86  SLVKACG----SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
           SL++ C     SL+  ++VH   L LG    V L    I  Y    +  SA   F +  D
Sbjct: 8   SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN-FD 66

Query: 142 L--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-NEFSLTAVLGASFDVKE---G 195
           +  D   + +++ GY  N  F  + EVF  + +  + + + F+   V+ A   +     G
Sbjct: 67  IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--- 252
             IH   VK G++  V   + ++++ +Y +     +++++FDE+ E DV SW+  I+   
Sbjct: 127 RMIHTLVVKSGYVCDVV--VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184

Query: 253 AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
            + +  +A  LF  +  + F+ N  ++   +S+      L  GK+I   C K GF     
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + +AL+ MYGKC  +  AR +F  +  K  V+WNSMI GY   G     +++   M+   
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
             P+  T+ SIL A S S++L     +H ++I+S    D  +   LI  Y KC   N ++
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            V S+  K  A   N + S  +      +A+E+Y  +     + +  TF+ VL AC+ + 
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            LE+GK IH    ++R + D  + SA++DMY KCG  ++A R F  I +  +  W  M+ 
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            Y  HG   E    F++M KFG+KPD +T LAVL++C HAGL+ E   + S M   +G+ 
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD-AHIWQSLLSACTIYGNIDLGLLAGS 671
           P +EHY+C++D+LGR G L  A   I Q P   D A +  +L SAC ++    LG     
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
            L+E  PD+ STY++L NLYAS   W+   ++R +MKE  L K+PG SWI +     HF+
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664

Query: 732 AGDSSHSQSKEIYKELIKLYEHM 754
           A D SH +++ +Y+ L  L  HM
Sbjct: 665 AEDRSHLRAENVYECLALLSGHM 687



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 287/603 (47%), Gaps = 26/603 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLAR 58
           ++  ++  G   D +L  +LI+ +    D    R  F   FD ++ D+  +N+L+SG ++
Sbjct: 26  VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN-FDIRS-DVYIWNSLMSGYSK 83

Query: 59  FCQSGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVY 114
                  L++F RL    +  PD+FTF +++KA G+L       ++H + +K G+   V 
Sbjct: 84  NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  +  YAK     ++   F +  + D  ++  ++  +  +GE +K+ E+F  M S G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            E N  SLT  + A      ++ G++IH   VK GF   +  ++N+A++++Y +C     
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF--ELDEYVNSALVDMYGKCDCLEV 261

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F ++    +V+W+  I    A  D      +   +     + ++ T+ ++L +   
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L  GK I  +  +      + +  +LI +Y KCG+ N A ++F       + SWN M
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ Y   G + +A++++  M+   + P+  T  S+L A S   +L++  Q+H  I +S  
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D+ ++S L+  Y KC    E+ R+ + I KK+ V    + S         EAL  +  
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDE 501

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKC 526
           +     + +G T   VL AC     +++G       ++++Y  +  +E  S +ID+  + 
Sbjct: 502 MQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS-QMRSKYGIEPIIEHYSCMIDILGRA 560

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG-CYHEVSNLFNKMSKFGVK--PDEITYL 583
           G + +A    ++    S    NA ++       C H   +L +++++  V+  PD+ +  
Sbjct: 561 GRLLEAYEIIQQTPETSD---NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617

Query: 584 AVL 586
            VL
Sbjct: 618 MVL 620



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 10/269 (3%)

Query: 380 MASILEAVSNS-KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           + S+L   +NS KSL++   VH  I+  G   D  +   LI  Y  C     ++ V    
Sbjct: 6   LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65

Query: 439 DKKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGS-TFSIVLKACAAMTDLEQ 496
           D ++ V+I N+L S     S   + LE+++ +      V  S TF  V+KA  A+     
Sbjct: 66  DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G+ IH L +K+ Y  D+ V S+++ MY K    E++ + F ++    +A WN ++  + Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGLVREARTYLSCMSDLHGLIPQL 615
            G   +   LF +M   G +P+ ++    +++C     L R    +  C+    G   +L
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK--KGF--EL 241

Query: 616 EHY--ACIVDLLGRVGLLEGAKMTIDQMP 642
           + Y  + +VD+ G+   LE A+    +MP
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMP 270



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 48/92 (52%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  + ++    D +L + L+  ++K  + + AFR       +D++++  +IS      
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
           Q   AL  FD ++  GL+PD  T  +++ ACG
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACG 522


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 215/663 (32%), Positives = 343/663 (51%), Gaps = 52/663 (7%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           S++  + +H   +K GF + +++++  I  Y+K   I+ A   F +    + V++T MV 
Sbjct: 18  SIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVS 77

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLE-LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFL 208
               +    ++  ++ EM    +E  N+F  +AVL   G   +V+ G+ +H    +    
Sbjct: 78  VLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLD 137

Query: 209 SGVCNHLNNAIMNLYVRCG-----QKL--------------------------DAVKMFD 237
             +   L NA++++YV+CG     Q++                          DA+K+FD
Sbjct: 138 VDIV--LMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFD 195

Query: 238 EITEPDVVSWSERIAAACDGVEAFGLFKDLRF------NDFQINEYTMINLLSSVGGERI 291
           ++ EPD+VSW+  IA   D   +    + LRF         +++E+T  ++L + G    
Sbjct: 196 KMPEPDIVSWNSIIAGLVDNASS----RALRFVSMMHGKGLKMDEFTFPSVLKACGCSDE 251

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-----WN 346
           L  G++I  +  K GF       +ALI MY  C  +++A  IFD      SVS     WN
Sbjct: 252 LMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWN 311

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           SM++G+  NG + +AL M  HM    +  + YT + +L+   N  +L  A QVH  +I S
Sbjct: 312 SMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITS 371

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G+ LD  + S LI  Y K  ++N + R+   +  K+ V  ++L +          A  L+
Sbjct: 372 GYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLF 431

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             +     +++    SIVLKAC+++   + GK +H L LK  Y+ +  V +A+IDMY KC
Sbjct: 432 MDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKC 491

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G IEDA   F  +       W ++++G AQ+G   E  +L +KM + G KP++IT L VL
Sbjct: 492 GDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVL 551

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           T+C H+GLV EA    + +   HGLIP  EHY C+VD+LG+ G  E A   I +MP  PD
Sbjct: 552 TACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPD 611

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             IW SLL AC  Y N DL  +    LL   P++ S Y++LSN+YA+ GMW+ V K+R+ 
Sbjct: 612 KTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRET 671

Query: 707 MKE 709
           +K+
Sbjct: 672 VKK 674



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 217/439 (49%), Gaps = 20/439 (4%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            TLI  + K      A +        DI+++N++I+GL     S  AL+    +  +GL+
Sbjct: 175 NTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASS-RALRFVSMMHGKGLK 233

Query: 79  PDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D FTF S++KACG   E      +H   +K GF S  Y +S  I+ Y+    +  A   
Sbjct: 234 MDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKI 293

Query: 136 FRDCLDLDNVA-----YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG--A 188
           F       +V+     + +M+ G+V NG++ ++  +   M   G+  + ++ + VL    
Sbjct: 294 FDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICM 353

Query: 189 SFD-VKEGEQIHGFGVKVGF-LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           +FD +    Q+HGF +  G+ L  V   + + ++++Y + G   +A+++F+ + + DVV+
Sbjct: 354 NFDNLSLASQVHGFVITSGYELDCV---VGSILIDIYAKQGSINNALRLFERLPDKDVVA 410

Query: 247 WSERIAAACD-GVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  I      G +  AF LF D+     QI+ + +  +L +       + GKQ+ + C 
Sbjct: 411 WSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCL 470

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K G+     +  ALI MY KCG + DA S+F  L   D++SW S+I G ++NG   +A+ 
Sbjct: 471 KKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAIS 530

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSGFLLDDSMISCLITTY 422
           +   M+E    PN  T+  +L A  +S  +++A  V + I    G +      +C++   
Sbjct: 531 LLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDIL 590

Query: 423 GKCNALNESKRVLSEIDKK 441
           G+     E+ +++SE+  K
Sbjct: 591 GQAGRFEEAVKLISEMPFK 609



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 202/422 (47%), Gaps = 54/422 (12%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R ++  K + +   K GF   + I N +IS+Y KC  + DAR++FD +  ++ VSW +M+
Sbjct: 17  RSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMV 76

Query: 350 AGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  + +   ++AL ++  M+E  +  PN +  +++L+A    ++++    VH HI ++  
Sbjct: 77  SVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKL 136

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA------------ 456
            +D  +++ L+  Y KC +L +++RV  EI  KNA   N L  +L YA            
Sbjct: 137 DVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTL--ILGYAKQGLIDDAMKLF 194

Query: 457 --------------------SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
                               +  + AL     + G   +++  TF  VLKAC    +L  
Sbjct: 195 DKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELML 254

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR-----DSLAGWNAMM 551
           G+ IHC  +K+ ++   +  SA+IDMY  C  + +A + F +  R     +SLA WN+M+
Sbjct: 255 GREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSML 314

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG- 610
            G+  +G Y E  ++ + M + GV+ D  T+  VL  C +          LS  S +HG 
Sbjct: 315 SGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNF-------DNLSLASQVHGF 367

Query: 611 LIPQLEHYACIV-----DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +I       C+V     D+  + G +  A    +++P   D   W SL++ C  +G+  L
Sbjct: 368 VITSGYELDCVVGSILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGCARFGSDKL 426

Query: 666 GL 667
             
Sbjct: 427 AF 428



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 180/383 (46%), Gaps = 36/383 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  +I +G+ LD ++ + LI  + K      A R      ++D++ +++LI+G ARF 
Sbjct: 363 QVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFG 422

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               A  LF  + + GL+ D F  S ++KAC SL   Q  + VH +CLK G+ S   + +
Sbjct: 423 SDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTT 482

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G+I  A   F    ++D +++T+++ G   NG  +++  +  +M   G + 
Sbjct: 483 ALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKP 542

Query: 178 NEFSLTAVLGA---SFDVKEGEQI-HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N+ ++  VL A   S  V+E   + +      G +   C    N ++++  + G+  +AV
Sbjct: 543 NKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIP--CPEHYNCMVDILGQAGRFEEAV 600

Query: 234 KMFDEIT-EPDVVSWSERIAAACDGVEAFGLF------------KDLRFNDFQINEYTMI 280
           K+  E+  +PD   WS  +  AC   +   L             +D+       N Y  +
Sbjct: 601 KLISEMPFKPDKTIWSS-LLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAAL 659

Query: 281 NLLSSVGGERIL-------RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  SV   R         RAGK      +K  FME + +G+A   + G  G V     I
Sbjct: 660 GMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHLGHAKQGLNG--GVVKVIYPI 717

Query: 334 FDYLIFKDSVSWNSMIAGYSENG 356
            +     D VSWN++IAG ++N 
Sbjct: 718 LE----PDLVSWNNVIAGLADNA 736



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 13/217 (5%)

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
           I  + C     ++  K++H   +K+ +   IF+ + +I +Y KC +I DA+  F ++   
Sbjct: 8   IAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHR 67

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV-KPDEITYLAVLTSCCHAGLVREARTY 601
           ++  W  M+         HE  +L+N+M +  + +P++  Y AVL +C   GLVR     
Sbjct: 68  NIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKAC---GLVRNVE-- 122

Query: 602 LSCMSDLHGLIPQLE----HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
           L  M   H    +L+        ++D+  + G L  A+    ++P   +A  W +L+   
Sbjct: 123 LGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPC-KNATSWNTLILGY 181

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              G ID  +    K+ E  PD  S   +++ L  +A
Sbjct: 182 AKQGLIDDAMKLFDKMPE--PDIVSWNSIIAGLVDNA 216


>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
          Length = 787

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 213/725 (29%), Positives = 360/725 (49%), Gaps = 32/725 (4%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           L+ ++ +      A +   +  +R+++++ A++S   R        + F  +   G  P+
Sbjct: 69  LLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPN 128

Query: 81  AFTFSSLVKACGSL---QENEI-----VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            F  ++++ AC S+     N++     +HGV ++ G  S  ++ S  +  YAK G I +A
Sbjct: 129 EFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAA 188

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS-LTAVLGASFD 191
           +  F    + D   + AM+ GYV NG    +    + M   GL  + ++ ++AV   S  
Sbjct: 189 QRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSIS 248

Query: 192 VKE--GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
            +   G Q+H   +     S     + N+++++Y R  QK  A  +F +I + D VSW+ 
Sbjct: 249 AQWDLGRQLHCLVIHSMLESNTS--VMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNT 306

Query: 250 RIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
             +      D    FG   D+    F+ NE T   LL   G +     G QI A  Y+ G
Sbjct: 307 MFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHG 366

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ---ALD 363
           + + V + NA+I+M  +CG ++ A   F  L F++ V+WN +IAGY   G F++   A+ 
Sbjct: 367 YTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGY---GLFSRSEDAMR 423

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF----LLDDSMISCLI 419
           +F  ++     P+ +T +++L A   +   +   Q+H+ I+K GF     +  S+I    
Sbjct: 424 LFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANA 483

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNG 478
             +G   ++  S +++ +  K   V   A+ S  +    + E + L+    G S  + + 
Sbjct: 484 AAFG---SVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDE 540

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
              + VL ACA    +   + IH L LK  +     V SAV+D Y KCG I  A+ AF  
Sbjct: 541 FILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTA 600

Query: 539 I--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
           +    +    +N M+  YA HG  HE  NL+ +M+K  + P   T++A+L++C H GLV 
Sbjct: 601 VSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVE 660

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           + +   S M   +G+ P+  +YAC+VDLL R GLL+ AK  ID MP  P   +W+SL++ 
Sbjct: 661 QGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNG 720

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+GN  LG+LA  ++L + P ++  YV LSN+YA  G W    + R+ M +  L K  
Sbjct: 721 CRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNKLQKVH 780

Query: 717 GYSWI 721
           GYS +
Sbjct: 781 GYSRV 785



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/578 (22%), Positives = 259/578 (44%), Gaps = 29/578 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ + ++ G   +P + ++L+  + K      A R     +N+D+  +NA++ G      
Sbjct: 156 LHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGF 215

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A+     + + GL PD +T+ S VKAC    + ++   +H + +     S   +++ 
Sbjct: 216 GHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNS 275

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGL 175
            ++ Y ++ +  +A   FR     D V++  M  G+  +   +  K VF   ++M   G 
Sbjct: 276 LVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHD---EDDKAVFGYLIDMSRTGF 332

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NE + + +L   GA  +   G QI     + G+   V   + NA++N+  RCG    A
Sbjct: 333 KPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL--VANAVINMLFRCGLLDRA 390

Query: 233 VKMFDEITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F  +T  ++V+W+E IA         +A  LF+ L     + +E+T   +LS+    
Sbjct: 391 YGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEA 450

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWNSM 348
              R  +QI A   K GF     +  +LI       G V  +  I +     + VSW ++
Sbjct: 451 HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAI 510

Query: 349 IAGYSENGFFNQALDMF-CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           I+ + ++G  ++ + +F     + +  P+ + +A++L A +N+  ++    +HS ++K+G
Sbjct: 511 ISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG 570

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALEL 465
                 + S ++  Y KC  +  ++   + +     +A+  N + +         EAL L
Sbjct: 571 HSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNL 630

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA----VID 521
           Y  +  +      +TF  +L AC+ +  +EQGK      L A     +  E A    ++D
Sbjct: 631 YEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSA---YGMHPERANYACLVD 687

Query: 522 MYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           +  + G +++AK     +  +   A W +++ G   HG
Sbjct: 688 LLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHG 725



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 138/652 (21%), Positives = 257/652 (39%), Gaps = 68/652 (10%)

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           KLG  +  + ++  +  YA+ G + SA   F +    + V++TAMV     NG       
Sbjct: 56  KLGTLAHTFNMNYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 115

Query: 166 VFVEMRSLGLELNEFSLTAVLGA--------SFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
            FV M   G   NEF+L  +L A        S  +     +HG  V+ G  S     + +
Sbjct: 116 FFVSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSN--PFVGS 173

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQI 274
           +++ +Y + G+   A + F  I   D+  W+  +        G  A      +  +    
Sbjct: 174 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAP 233

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + YT I+ + +         G+Q+             S+ N+L+ MY +  Q   A S+F
Sbjct: 234 DRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVF 293

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +  KD+VSWN+M +G++ +            M      PN  T + +L      ++  
Sbjct: 294 RKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENAS 353

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +Q+ +   + G+  +  + + +I    +C  L+ +      +  +N V  N + +   
Sbjct: 354 LGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYG 413

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
             S   +A+ L+R++       +  T+S VL A          + IH + LK  +    F
Sbjct: 414 LFSRSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQF 473

Query: 515 VESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           V +++I       G+++ + +      +  L  W A++  + +HG   EV  LFN     
Sbjct: 474 VSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGD 533

Query: 574 GV-KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLG 626
              KPDE     VL +C +A L+R  R        +H L+ +  H       + +VD   
Sbjct: 534 STNKPDEFILATVLNACANAALIRHCRC-------IHSLVLKTGHSNHFCVASAVVDAYA 586

Query: 627 RVGLLEGAKMT------------------------------------IDQMPIPPDAHIW 650
           + G +  A+                                      + +  + P    +
Sbjct: 587 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 646

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWND 699
            ++LSAC+  G ++ G LA S +L    + P+  + Y  L +L A  G+ ++
Sbjct: 647 VAILSACSHLGLVEQGKLAFSTMLSAYGMHPE-RANYACLVDLLARKGLLDE 697



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 176/366 (48%), Gaps = 17/366 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L  ++G+  + +++  +I+   +     RA+ F      R+I+T+N +I+G   F 
Sbjct: 357 QIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFS 416

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +S  A++LF  L   G RPD FT+S+++ A       +++E +H + LK GF+S  ++ +
Sbjct: 417 RSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVST 476

Query: 118 GFIE-NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
             I+ N A  G + S+     D   ++ V++ A++  ++ +G  D+   +F   R     
Sbjct: 477 SLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTN 536

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +EF L  VL A  +   ++    IH   +K G  +  C  + +A+++ Y +CG+   A
Sbjct: 537 KPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFC--VASAVVDAYAKCGEITSA 594

Query: 233 VKMFDEITEP--DVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
              F  ++    D + ++  + A A  G+  EA  L++++          T + +LS+  
Sbjct: 595 ESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACS 654

Query: 288 GERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSW 345
              ++  GK          G     +    L+ +  + G +++A+ + D + F+     W
Sbjct: 655 HLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVW 714

Query: 346 NSMIAG 351
            S++ G
Sbjct: 715 RSLVNG 720


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 212/678 (31%), Positives = 342/678 (50%), Gaps = 17/678 (2%)

Query: 83  TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           T+    K   S+      H   +  GF + + L++   +  +  G I  A   F      
Sbjct: 22  TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNE----FSLTAVLGASFDVKEGEQ 197
           D   +  ++ G+  N     S  VF  +R S  L+ N     F+++A  G   D + G  
Sbjct: 82  DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR-DDRAGRV 140

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           IHG  V  G  S +   L + I+ +Y +  +  DA K+FD + E D + W+  I+     
Sbjct: 141 IHGQAVVDGCDSELL--LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198

Query: 258 ---VEAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
              VE+  +F+DL  N+   +++  T++++L +V   + LR G QI +   K G      
Sbjct: 199 EMYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +    IS+Y KCG++    ++F      D V++N+MI GY+ NG    +L +F  ++   
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
                 T+ S+   V  S  L     +H + +KS FL   S+ + L T Y K N +  ++
Sbjct: 318 ARLRSSTLVSL---VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           ++  E  +K+    NA+ S         +A+ L+R +  S    N  T + +L ACA + 
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L  GK +H L     ++  I+V +A+I MY KCG+I +A+R F  + + +   WN M+ 
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           GY  HG   E  N+F +M   G+ P  +T+L VL +C HAGLV+E     + M   +G  
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P ++HYAC+VD+LGR G L+ A   I+ M I P + +W++LL AC I+ + +L      K
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           L EL PDN   +VLLSN++++   +     +R+  K++ L K PGY+ I +G   H F +
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTS 674

Query: 733 GDSSHSQSKEIYKELIKL 750
           GD SH Q KEIY++L KL
Sbjct: 675 GDQSHPQVKEIYEKLEKL 692



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 10/359 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+SL  K G +    + T  IS ++K    +       + +  DI+ YNA+I G     
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           ++  +L LF  L   G R  + T  SLV   G L     +HG CLK  F S   + +   
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALT 361

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y+K  EI SA   F +  +    ++ AM+ GY  NG  + +  +F EM+      N  
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421

Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++T +L A   +     G+ +H       F S +  +++ A++ +Y +CG   +A ++FD
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSI--YVSTALIGMYAKCGSIAEARRLFD 479

Query: 238 EITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +T+ + V+W+  I+       G EA  +F ++  +       T + +L +     +++ 
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539

Query: 295 GKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
           G +I  +  ++ GF   V     ++ + G+ G +  A    + + I   S  W +++  
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 223/768 (29%), Positives = 395/768 (51%), Gaps = 23/768 (2%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSG 63
           LL+      DP+  T LI  +  F     + R +F+     D   Y  LI          
Sbjct: 24  LLVTGRLRRDPLPVTKLIESYA-FMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLD 82

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRVYLVSGF 119
            A+ L+ RL  +  +   F F S+++AC   +E+      VHG  +K G      + +  
Sbjct: 83  AAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSL 142

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y ++G +  AE  F      D VA++ +V   + NGE  K+  +F  M   G+E + 
Sbjct: 143 LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202

Query: 180 FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++ +V+    ++   +    +HG   +  F   +   L N+++ +Y +CG  L + ++F
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMF--DLDETLCNSLLTMYSKCGDLLSSERIF 260

Query: 237 DEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           ++I + + VSW+  I++   G    +A   F ++  +  + N  T+ ++LSS G   ++R
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320

Query: 294 AGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
            GK +  F  +        S+  AL+ +Y +CG+++D  ++   +  ++ V+WNS+I+ Y
Sbjct: 321 EGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLY 380

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +  G   QAL +F  M+   + P+ +T+AS + A  N+  +    Q+H H+I++  + D+
Sbjct: 381 AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDE 439

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + LI  Y K  +++ +  V ++I  ++ V  N++           EA+ L+  ++ S
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             E+N  TF  V++AC+++  LE+GK +H   + +   +D+F ++A+IDMY KCG +  A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +  FR +   S+  W++M+  Y  HG      + FN+M + G KP+E+ ++ VL++C H+
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G V E + Y + M    G+ P  EH+AC +DLL R G L+ A  TI +MP   DA +W S
Sbjct: 619 GSVEEGKYYFNLMKSF-GVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           L++ C I+  +D+     + L ++  D+   Y LLSN+YA  G W +  +LR  MK   L
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY-----EHMV 755
            K PGYS I +      F AG+ +  Q+ EIY+ L  L      EH+V
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVV 785



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 291/599 (48%), Gaps = 17/599 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IK G   D ++ T+L+  + +  +   A +       RD++ ++ L+S      
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL++F  +   G+ PDA T  S+V+ C   G L+    VHG   +  F     L +
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLGLE 176
             +  Y+K G+++S+E  F      + V++TAM+  Y   GEF +K+   F EM   G+E
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN-RGEFSEKALRSFSEMIKSGIE 300

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +L +VL   G    ++EG+ +HGF V+   L      L+ A++ LY  CG+  D  
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE-LDPNYESLSLALVELYAECGKLSDCE 359

Query: 234 KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +   +++ ++V+W+  I+  A  G  ++A GLF+ +     + + +T+ + +S+     
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           ++  GKQI     +    +   + N+LI MY K G V+ A ++F+ +  +  V+WNSM+ 
Sbjct: 420 LVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+S+NG   +A+ +F +M    L  N  T  ++++A S+  SL++   VH  +I SG L 
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LK 537

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D    + LI  Y KC  LN ++ V   +  ++ V  +++ +          A+  +  + 
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            S  + N   F  VL AC     +E+GK    L        +    +  ID+  + G ++
Sbjct: 598 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLK 657

Query: 531 DAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +A R  +++   + A  W +++ G   H     +  + N +S   +  D+  Y  +L++
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD--IVTDDTGYYTLLSN 714



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 51/352 (14%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           SL+   Q+H+H++ +G L  D + ++ LI +Y    + + S+ V       ++     L 
Sbjct: 13  SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 72

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARY 509
              V+      A++LY  +     +++   F  VL+ACA   + L  G  +H   +K   
Sbjct: 73  KCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D D  +E++++ MY + G + DA++ F  +    L  W+ ++    ++G   +   +F  
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ-------------LE 616
           M   GV+PD +T ++V+  C   G +R AR+       +HG I +             L 
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARS-------VHGQITRKMFDLDETLCNSLLT 245

Query: 617 HYACIVDLL------------------------GRVGLLEGAKMTIDQM---PIPPDAHI 649
            Y+   DLL                         R    E A  +  +M    I P+   
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVT 305

Query: 650 WQSLLSACTIYGNIDLG--LLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
             S+LS+C + G I  G  +   +   EL P+ ES  + L  LYA  G  +D
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 198/534 (37%), Positives = 281/534 (52%), Gaps = 18/534 (3%)

Query: 232  AVKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A   +  + + +V SW+  IA      D VEA   F  LR         +    + S   
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L +G+      +  GF   + + +ALI MY KCGQ+ DAR++FD +  ++ VSW SM
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214

Query: 349  IAGYSENGFFNQALDMFCHMLEFSL-------IP-NGYTMASILEAVSNSKSLKQAMQVH 400
            I GY +N   + AL +F   LE          +P +   M S+L A S          VH
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274

Query: 401  SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              ++K GF     + + L+  Y KC     SK+V   +++K+ +  N++ +V   +    
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334

Query: 461  EALELYRTIWGSCREV----NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
            EALE++    G  R V    N  T S VL ACA    L  GK IH   +K   + ++ V 
Sbjct: 1335 EALEVFH---GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391

Query: 517  SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            +++IDMYCKCG +E AK+ F ++   ++  W AM+ GY  HG   E  ++F KM + GVK
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451

Query: 577  PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
            P+ IT+++VL +C HAGLV E   + + M   + + P +EHY C+VDL GR G L  A  
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511

Query: 637  TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
             I +M + PD  +W SLL AC I+ N+DLG +A  KL EL PDN   YVLLSNLYA AG 
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571

Query: 697  WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            W DV ++R  MK + L K PG+S + + G  H F  GD  H   + IYK L KL
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKL 1625



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 220/449 (48%), Gaps = 43/449 (9%)

Query: 17   LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
            LS+ L + F K+ D              ++ ++N++I+ LAR   S  AL+ F  LR  G
Sbjct: 1090 LSSNLATWFYKYVD------------KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLG 1137

Query: 77   LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            L P   +F   +K+C +L +     + H      GF + +++ S  I+ Y+K G++  A 
Sbjct: 1138 LIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDAR 1197

Query: 134  MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE--------LNEFSLTAV 185
              F +    + V++T+M+ GYV N + D +  +F +      E        L+   + +V
Sbjct: 1198 ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSV 1257

Query: 186  LGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
            L A   V      E +HGF VK GF   +   + N +M+ Y +CGQ L + K+FD + E 
Sbjct: 1258 LSACSRVSGKGITEGVHGFVVKKGFDGSI--GVGNTLMDAYAKCGQPLVSKKVFDWMEEK 1315

Query: 243  DVVSWSERIAA-ACDGV--EAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            D +SW+  IA  A  G+  EA  +F  + R    + N  T+  +L +      LRAGK I
Sbjct: 1316 DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCI 1375

Query: 299  QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
                 K+     V +G ++I MY KCG+V  A+  FD +  K+  SW +M+AGY  +G  
Sbjct: 1376 HDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRA 1435

Query: 359  NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ------AMQVHSHIIKSGFLLDD 412
             +ALD+F  M+   + PN  T  S+L A S++  +++      AM+ H + I+ G     
Sbjct: 1436 KEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMK-HKYDIEPGI---- 1490

Query: 413  SMISCLITTYGKCNALNESKRVLSEIDKK 441
                C++  +G+   LNE+  ++  +  K
Sbjct: 1491 EHYGCMVDLFGRAGCLNEAYNLIKRMKMK 1519



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 175/370 (47%), Gaps = 31/370 (8%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A   + G      +   LI +Y   G++  A  +F  +    + +WN +I   + N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   QAL ++ +M+   +  + +T   +++A +N  S+     VH  +IK GF  D  + 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 416 SCLITTYGKCN-------------------------------ALNESKRVLSEIDKKNAV 444
           + LI  Y KC                                 L E++R+  EI  KN V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              A+ +  +      EALEL++ +       N  T   ++KAC  M  L  G+ IH  A
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K   +  +++ +A+IDMY KCG+I+DA   F  + R SL  WN+M+     HG   E  
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           NLF++M +  VKPD IT++ VL +C H   V+E   Y + M+  +G+ P  EHY C+ +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 625 LGRVGLLEGA 634
             R   L+ A
Sbjct: 404 YARSNNLDEA 413



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 167/388 (43%), Gaps = 36/388 (9%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C + +    +H   ++ G S+   L    I  Y+  G I  A + F    +     
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGV 203
           +  ++     NG  +++  ++  M   G+  ++F+   V+ A      +  G+ +HG  +
Sbjct: 93  WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152

Query: 204 KVGFLSGV------------CNHLNNA-----------------IMNLYVRCGQKLDAVK 234
           K GF   V            C H   A                 +++  + CG   +A +
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDEI   +VVSW+  I          EA  LFK ++  +   NEYTM++L+ +     I
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I  +  K      V +G ALI MY KCG + DA  +F+ +  K   +WNSMI  
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
              +G   +AL++F  M   ++ P+  T   +L A  + K++K+     + + +  G   
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEI 438
                 C+   Y + N L+E+ +   E+
Sbjct: 393 IPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 182/405 (44%), Gaps = 23/405 (5%)

Query: 328  NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            N A   + Y+   +  SWNS+IA  +  G   +AL  F  + +  LIP   +    +++ 
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152

Query: 388  SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
            S    L      H      GF  D  + S LI  Y KC  L +++ +  EI  +N V   
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212

Query: 448  ALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSI-------VLKACAAMTDLEQGKA 499
            ++ +  V       AL L++       EV +G+   +       VL AC+ ++     + 
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272

Query: 500  IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
            +H   +K  +D  I V + ++D Y KCG    +K+ F  +       WN+M+  YAQ G 
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332

Query: 560  YHEVSNLFNKMSK-FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              E   +F+ M +  GV+ + +T  AVL +C HAG +R  +    C+ D   +   LE+ 
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK----CIHD-QVIKMDLEYN 1387

Query: 619  AC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
             C    I+D+  + G +E AK T D+M    +   W ++++   ++G     L    K++
Sbjct: 1388 VCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446

Query: 675  E--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
               ++P N  T+V +    + AG+  +       MK K+   EPG
Sbjct: 1447 RAGVKP-NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI-EPG 1489



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 150/323 (46%), Gaps = 42/323 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I++G   D +L+  LI  ++       A    +  QN    T+N +I       
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
            S  AL L+  +  QG+  D FTF  ++KAC    S+   ++VHG  +K GFS  V++ +
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 118 GFIENYAKSGEIVSAEMCFR------------------DCLDLDN-------------VA 146
             I+ Y K G    A   F                    C DL               V+
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +TAM+ GY+ N + +++ E+F  M++  +  NE+++ +++ A  +   +  G  IH + +
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEA 260
           K     GV  +L  A++++Y +CG   DA+++F+ +    + +W+  I +      G EA
Sbjct: 285 KNCIEIGV--YLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 261 FGLFKDLRFNDFQINEYTMINLL 283
             LF ++   + + +  T I +L
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVL 365



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 145/352 (41%), Gaps = 56/352 (15%)

Query: 372 SLIPNGYTMAS-ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            L P G   A   L  + N K+ K   Q+H+ II+SG   D  +   LI  Y     +  
Sbjct: 18  PLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAY 77

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +  +  +I        N +           +AL LY+ +       +  TF  V+KAC  
Sbjct: 78  AILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTN 137

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK------------------------- 525
              ++ GK +H   +K  +  D+FV++ +ID Y K                         
Sbjct: 138 FLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTV 197

Query: 526 ------CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
                 CG +++A+R F +I   ++  W AM+ GY ++    E   LF +M    + P+E
Sbjct: 198 ISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNE 257

Query: 580 ITYLAVLTSCCHAGLVREAR-----TYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLE 632
            T ++++ +C   G++   R        +C+        ++  Y    ++D+  + G ++
Sbjct: 258 YTMVSLIKACTEMGILTLGRGIHDYAIKNCI--------EIGVYLGTALIDMYSKCGSIK 309

Query: 633 GAKMTIDQMP---IPPDAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPD 679
            A    + MP   +P     W S++++  ++  G   L L +  + + ++PD
Sbjct: 310 DAIEVFETMPRKSLP----TWNSMITSLGVHGLGQEALNLFSEMERVNVKPD 357



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++  ++K G      +  TL+  + K      + +     + +D I++N++I+  A+   
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332

Query: 62   SGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            SG AL++F  + R+ G+R +A T S+++ AC   G+L+  + +H   +K+     V + +
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I+ Y K G +  A+  F    + +  ++TAMV GY  +G   ++ ++F +M   G++ 
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452

Query: 178  NEFSLTAVLGASFD---VKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            N  +  +VL A      V+EG        H + ++ G     C      +++L+ R G  
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC------MVDLFGRAGCL 1506

Query: 230  LDAVKMFDEIT-EPDVVSWSERIAA 253
             +A  +   +  +PD V W   + A
Sbjct: 1507 NEAYNLIKRMKMKPDFVVWGSLLGA 1531



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 6/183 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           TT+IS      D + A R   +  +++++++ A+I+G  R  Q   AL+LF R++ + + 
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254

Query: 79  PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P+ +T  SL+KAC   G L     +H   +K      VYL +  I+ Y+K G I  A   
Sbjct: 255 PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEV 314

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F          + +M+     +G   ++  +F EM  + ++ +  +   VL A     +V
Sbjct: 315 FETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374

Query: 193 KEG 195
           KEG
Sbjct: 375 KEG 377



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   IKN   +   L T LI  ++K    + A         + + T+N++I+ L     
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              AL LF  +    ++PDA TF  ++ AC  ++    V   C      ++ Y ++   E
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN---VKEGCAYFTRMTQHYGIAPIPE 395

Query: 122 NYAKSGEIVSA----EMCFRDCLDLDNVAYTAMVC 152
           +Y    E+ +     +  F+   ++ ++A +  +C
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEVGSLANSPSIC 430


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 209/706 (29%), Positives = 357/706 (50%), Gaps = 19/706 (2%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ-------- 95
           R    +N+L   LA       AL++++ +   G+RPD  TF   + A  +          
Sbjct: 69  RSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128

Query: 96  ENEIVHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           +   +H   L+ G   + V+  +  +  YA  G    A   F +    D V++ ++V   
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSAL 188

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGV 211
           + NG  + +K   V M   G+ +N  SL +V+   G   D   G  +HG  +K G L  V
Sbjct: 189 LTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSG-LDSV 247

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLR 268
            N L NA++++Y + G    ++++F+ + E + VSW+  +   A A    +   +F+ + 
Sbjct: 248 VN-LGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMS 306

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            ++      T+ +LL ++        GK++  +  +      + I N+L+ MY K G + 
Sbjct: 307 EHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLE 366

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            A +IF+ +  ++ VSWN+MIA  ++NG   +A  +   M +    PN +T+ ++L A S
Sbjct: 367 KASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACS 426

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
              S+K   Q+H+  I    + D  + + LI  Y KC  L+ ++ +    +K + V  N 
Sbjct: 427 RVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDD-VSYNT 485

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           L      + C  E+L L++ +  +  E +  +F   L ACA ++  +QGK IH + ++  
Sbjct: 486 LIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRL 545

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
            +   F+ ++++D+Y K G +  A + F +I R  +A WN M++GY  HG       LF+
Sbjct: 546 LNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFD 605

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
            M   GV  D ++Y+AVL++C H GLV   + Y S M     + PQ  HYAC+VDLLGR 
Sbjct: 606 LMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMI-AQNIKPQQMHYACMVDLLGRA 664

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  +   I  MP P ++ +W +LL +C I+G+I+L  LA   L EL+P++   Y LL 
Sbjct: 665 GQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLR 724

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           N+Y+ +GMWN+  +++  MK + + K P YSW+  G     F  GD
Sbjct: 725 NMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 282/606 (46%), Gaps = 22/606 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D     TL++ +        A R   +   RDI+++N+L+S L        A +    + 
Sbjct: 146 DVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMM 205

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+  +  +  S+V ACG+ ++      VHG+ LK G  S V L +  ++ Y K G++ 
Sbjct: 206 RSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLE 265

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
           S+   F    + + V++ + +  +   G  +   E+F  M    +     +L+++L A  
Sbjct: 266 SSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALV 325

Query: 191 DV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           D+     G+++HG+ ++    S +   + N++M++Y + G    A  +F+ I   +VVSW
Sbjct: 326 DLGYFHLGKEVHGYSIRRAMESDI--FIANSLMDMYAKFGCLEKASAIFENIEGRNVVSW 383

Query: 248 SERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  IA  A +G   EAF L  +++ N    N +T++NLL +      ++ GKQI A+   
Sbjct: 384 NAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIH 443

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
              M  + + NALI +Y KCGQ++ A+ IFD    KD VS+N++I GYS++    ++L +
Sbjct: 444 RSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHL 502

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  M    +  +  +    L A +N  + KQ  ++H  +++        + + L+  Y K
Sbjct: 503 FQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTK 562

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWGSCREVNGSTF 481
              L  + ++ + I +K+    N +  +L Y   H +   A EL+  +     + +  ++
Sbjct: 563 GGMLATASKIFNRITRKDVASWNTM--ILGYG-MHGQIDVAFELFDLMKDDGVDYDHVSY 619

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             VL AC+    +++GK      +           + ++D+  + G + ++      +  
Sbjct: 620 IAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPF 679

Query: 542 DSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAGLVREAR 599
            + +  W A++     HG   E++ L  +   F +KP+   Y  +L +    +G+  EA 
Sbjct: 680 PANSDVWGALLGSCRIHGDI-ELARLAAE-HLFELKPEHSGYYTLLRNMYSESGMWNEAN 737

Query: 600 TYLSCM 605
              + M
Sbjct: 738 EIKTLM 743



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 212/451 (47%), Gaps = 22/451 (4%)

Query: 2   IYSLLIKNGHHLDPI--LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++ L++K+G  LD +  L   L+  + KF D   + R     Q ++ +++N   S L  F
Sbjct: 235 VHGLVLKSG--LDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWN---SALGCF 289

Query: 60  CQSG---PALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRV 113
             +G     L++F  +    + P + T SSL+ A    G     + VHG  ++    S +
Sbjct: 290 AHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDI 349

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  ++ YAK G +  A   F +    + V++ AM+     NG   ++  + +EM+  
Sbjct: 350 FIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKN 409

Query: 174 GLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G   N F+L  +L A      VK G+QIH + +    +S +   ++NA++++Y +CGQ  
Sbjct: 410 GECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDL--FVSNALIDVYAKCGQLS 467

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A  +FD  +E D VS++  I          E+  LF+ +R    + +  + +  LS+  
Sbjct: 468 VAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACA 526

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                + GK+I     +        + N+L+ +Y K G +  A  IF+ +  KD  SWN+
Sbjct: 527 NLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNT 586

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI GY  +G  + A ++F  M +  +  +  +  ++L A S+   + +  +  S +I   
Sbjct: 587 MILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQN 646

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
                   +C++   G+   L+ES  +++ +
Sbjct: 647 IKPQQMHYACMVDLLGRAGQLSESVEIITNM 677



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 201/424 (47%), Gaps = 33/424 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   I+     D  ++ +L+  + KF    +A     + + R+++++NA+I+ LA+  
Sbjct: 335 EVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNG 394

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A  L   ++  G  P++FT  +L+ AC    S++  + +H   +     S +++ +
Sbjct: 395 AETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSN 454

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G++  A+  F D  + D+V+Y  ++ GY  +    +S  +F +MRS G+E 
Sbjct: 455 ALIDVYAKCGQLSVAQDIF-DRSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEY 513

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S    L A  ++   K+G++IH  GV V  L      L N++++LY + G    A K
Sbjct: 514 DAVSFMGCLSACANLSAFKQGKEIH--GVLVRRLLNTHPFLANSLLDLYTKGGMLATASK 571

Query: 235 MFDEITEPDVVSWSERIAAACDGVE-----AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F+ IT  DV SW+  I     G+      AF LF  ++ +    +  + I +LS+    
Sbjct: 572 IFNRITRKDVASWNTMILGY--GMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHG 629

Query: 290 RILRAGK----QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVS 344
            ++  GK    Q+ A   K   M        ++ + G+ GQ++++  I   + F  +S  
Sbjct: 630 GLVDRGKKYFSQMIAQNIKPQQMHYA----CMVDLLGRAGQLSESVEIITNMPFPANSDV 685

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQA 396
           W +++     +G    A     H+ E        ++L+ N Y+ + +    +  K+L ++
Sbjct: 686 WGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKS 745

Query: 397 MQVH 400
            +V 
Sbjct: 746 RKVQ 749


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 305/554 (55%), Gaps = 11/554 (1%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G  +H   +K G  S V   ++N ++N+Y +CG    A ++FDE+ E ++VSWS  I+  
Sbjct: 22  GLSLHAAVLKTGTQSDV--FMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGY 79

Query: 255 CDGVEAFGLFKDLRFNDFQI-NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               E   +  DL    F + NEY   +++S+      +  G++I +   K G+  +  +
Sbjct: 80  DQAGEP-QMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N+LISMY KC Q +DA S+F      + VS+N++I G+ EN    + L+ F  M +  L
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           IP+ +    +L   + +++LK+  ++H   +K        + + +IT Y + N + E+++
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS----TFSIVLKACA 489
               I++K+ +  N L +   +   HA+ L +++ +     E N      TF+  L ACA
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHM---TEETNVRPDDFTFTSALAACA 315

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  +  GK IH   ++ R  QD+ V +A+++MY KCG I  A   F K+   +L  WN 
Sbjct: 316 GLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++ G+  HG       LF +M+  G++PD +T++ +LT+C HAGLV + + Y + M + +
Sbjct: 376 IIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETY 435

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G+ P +EH++C++D+LGR G L  A+  + + P   D  +  SLLSA  ++G++ +G   
Sbjct: 436 GIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERL 495

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
              LL+LQP   S YVLLSNLYAS GMW+ V + RK +K   L KEPG+S I V G    
Sbjct: 496 AKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEK 555

Query: 730 FYAGDSSHSQSKEI 743
           F  GD +H + KEI
Sbjct: 556 FTIGDFTHLRIKEI 569



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 238/479 (49%), Gaps = 30/479 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK-----FADFRRAFRFLFDTQNRDIITYNALISGL 56
           +++ ++K G   D  +S  +++ + K     FA  R+ F  +F+   +++++++A+ISG 
Sbjct: 25  LHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFA--RQVFDEMFE---KNLVSWSAMISGY 79

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRV 113
            +  +   A+ L+ ++    L P+ + F+S++ AC SL      + +H   LK G+ S  
Sbjct: 80  DQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESIS 136

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  I  Y K  +   A   F +  + + V+Y A++ G+V N + ++  E F  MR  
Sbjct: 137 FVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQ 196

Query: 174 GLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           GL  + F+   VLG    + ++K G ++H   VK+   S     + N I+ +Y       
Sbjct: 197 GLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDS--TPFIGNVIITMYSELNLIQ 254

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDL-RFNDFQINEYTMINLLSSV 286
           +A K F  I E DV+SW+  IAA     D  +   +FK +    + + +++T  + L++ 
Sbjct: 255 EAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAAC 314

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G   +  GKQI A   +    + + +GNAL++MY KCG +  A  IF  ++  + VSWN
Sbjct: 315 AGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWN 374

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++IAG+  +G   +A+++F  M    + P+  T   +L A  N   L    Q++ + ++ 
Sbjct: 375 TIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTAC-NHAGLVDKGQLYFNSMEE 433

Query: 407 --GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
             G   D    SCLI   G+   LNE++  + +    N   +  L S+L  +  H + +
Sbjct: 434 TYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVV--LVSLLSASRLHGDVV 490



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 212/460 (46%), Gaps = 43/460 (9%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ +LL      + LR G  + A   K G    V + N +++MY KCG    AR +FD +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             K+ VSW++MI+GY + G    A+D++  M    L+PN Y  AS++ A ++  ++    
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           ++HS  +K G+     + + LI+ Y KCN  +++  V +   + N V  NAL +  V   
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
                LE ++ +       +   F  VL  C    +L++G  +HC  +K   D   F+ +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-KFGVK 576
            +I MY +   I++A++AFR I    +  WN ++   +    + +   +F  M+ +  V+
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301

Query: 577 PDEITYLAVLTSCC-----------HAGLVREARTY---------------LSCMSDLHG 610
           PD+ T+ + L +C            HA L+R  R Y                 C+   + 
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMR-TRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 611 LIPQLEH-----YACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLSACTIYGN 662
           +  ++ H     +  I+   G  GL E A    +QM    I PD+  +  LL+AC   G 
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 663 IDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWND 699
           +D G L  + + E   + PD E  +  L ++   AG  N+
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEH-FSCLIDMLGRAGRLNE 459



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 222/468 (47%), Gaps = 18/468 (3%)

Query: 83  TFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           T SSL+  C    +L+    +H   LK G  S V++ +  +  YAK G    A   F + 
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGE 196
            + + V+++AM+ GY   GE   + +++ +M    L  NE+   +V+ A      V  G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           +IH   +K G+ S   + ++N+++++Y++C Q  DA+ +F    EP+ VS++  I    +
Sbjct: 122 KIHSRSLKFGYES--ISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179

Query: 257 GVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             +       FK +R      + +  + +L        L+ G ++     K+       I
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           GN +I+MY +   + +A   F  +  KD +SWN++IA  S      + L +F HM E + 
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299

Query: 374 I-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           + P+ +T  S L A +   S+    Q+H+H++++    D  + + L+  Y KC  +  + 
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            + S++   N V  N + +          A+EL+  +  S    +  TF  +L AC    
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419

Query: 493 DLEQGKAIHCLALKARYD--QDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            +++G+ ++  +++  Y    DI   S +IDM  + G + +A+   RK
Sbjct: 420 LVDKGQ-LYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRK 466



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 18/360 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+S  +K G+     +S +LIS + K      A     +T   + ++YNALI+G     
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L+ F  +R QGL PD F F  ++  C +   L+    +H   +KL   S  ++ +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLE 176
             I  Y++   I  AE  FR   + D +++  ++       +  K   VF  M     + 
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F+ T+ L A      +  G+QIH   ++      +   + NA++N+Y +CG    A 
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDL--GVGNALVNMYAKCGCIGYAY 359

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F ++   ++VSW+  IA   +   G  A  LF+ +  +  + +  T I LL++     
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419

Query: 291 ILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           ++  G+    +     G    +   + LI M G+ G++N+A        F     WN  +
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPF-----WNDPV 474


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 183/561 (32%), Positives = 299/561 (53%), Gaps = 34/561 (6%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQ 273
           N ++N+YV+     DA K+FDE+ E + +S+   I    + V   EA  LF  L     +
Sbjct: 77  NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHE 136

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +N +    +L  +        G  I A  +K+G      +G ALI  Y  CG+V+ AR +
Sbjct: 137 LNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREV 196

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +++KD VSW  M+  ++EN  F +AL +F  M      PN +T AS+ +A    ++ 
Sbjct: 197 FDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAF 256

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
                VH   +KS + LD  +   L+  Y K   +++++R   EI KK+ +  + + +  
Sbjct: 257 DVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARY 316

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +    EA+E++  +  +    N  TF+ VL+ACA M  L  G  IHC  +K     D+
Sbjct: 317 AQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV 376

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           FV +A++D+Y KCG +E++   F +    +   WN +++G+ Q G   +   LF  M ++
Sbjct: 377 FVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEY 436

Query: 574 -------------------------------GVKPDEITYLAVLTSCCHAGLVREARTYL 602
                                           VKPD++T++ VL++C +AGL+ + + Y 
Sbjct: 437 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYF 496

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + M   HG+ P +EHY C+V LLGR G L+ A   ID++P  P   +W++LL AC I+ +
Sbjct: 497 TSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHND 556

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           I+LG ++  ++LE++P +++T+VLLSN+YA+A  W++V  +RK MK K + KEPG SWI 
Sbjct: 557 IELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIE 616

Query: 723 VGGYTHHFYAGDSSHSQSKEI 743
             G  H F  GD+SH + + I
Sbjct: 617 SQGTVHSFTVGDTSHPEVRVI 637



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 210/413 (50%), Gaps = 17/413 (4%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGP 64
           ++K G  LD      L++ + K +DF      LFD    R+ I++  LI G A   +   
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVK-SDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIE 121
           A++LF RL  +G   + F F++++K   S    E+   +H    KLG  S  ++ +  I+
Sbjct: 123 AIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALID 182

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y+  G +  A   F   L  D V++T MV  +  N  F ++ ++F +MR +G + N F+
Sbjct: 183 AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242

Query: 182 LTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
             +V  A     +FDV  G+ +HG  +K  +   +  ++  A+++LY + G   DA + F
Sbjct: 243 FASVFKACLGLEAFDV--GKSVHGCALKSRYELDL--YVGVALLDLYTKSGDIDDARRAF 298

Query: 237 DEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           +EI + DV+ WS    R A +    EA  +F  +R      N++T  ++L +      L 
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLN 358

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G QI     K+G    V + NAL+ +Y KCG++ ++  +F     ++ V+WN++I G+ 
Sbjct: 359 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV 418

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           + G   +AL +F +MLE+ +     T +S L A ++  +L+  +Q+HS  +K 
Sbjct: 419 QLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKP 471



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 234/501 (46%), Gaps = 20/501 (3%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LK G    ++  +  +  Y KS  +  A   F +  + + +++  ++ GY  +  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLN 216
           F ++ E+FV +   G ELN F  T +L    S D  E G  IH    K+G  S     + 
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNA--FVG 177

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
            A+++ Y  CG+   A ++FD I   D+VSW+  +    +     EA  LF  +R   F+
Sbjct: 178 TALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N +T  ++  +  G      GK +     K  +   + +G AL+ +Y K G ++DAR  
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRA 297

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ +  KD + W+ MIA Y+++    +A++MF  M +  ++PN +T AS+L+A +  + L
Sbjct: 298 FEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               Q+H H+IK G   D  + + L+  Y KC  +  S  + +E   +N V  N +    
Sbjct: 358 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGH 417

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V      +AL L+  +     +    T+S  L+ACA++  LE G  IH L +K   D+  
Sbjct: 418 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKP--DKLT 475

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDS-----LAGWNAMMMGYAQHGCYHEVSNLFN 568
           FV   V+      G ++  +  F  + +D      +  +  M+    + G   +   L +
Sbjct: 476 FV--GVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID 533

Query: 569 KMSKFGVKPDEITYLAVLTSC 589
           ++     +P  + + A+L +C
Sbjct: 534 EIP---FQPSVMVWRALLGAC 551



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 171/347 (49%), Gaps = 17/347 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I++ + K GH  +  + T LI  ++       A R +FD    +D++++  +++  A   
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVA-REVFDGILYKDMVSWTGMVTCFAEND 219

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ALKLF ++R  G +P+ FTF+S+ KAC  L+  ++   VHG  LK  +   +Y+  
Sbjct: 220 CFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGV 279

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y KSG+I  A   F +    D + ++ M+  Y  + +  ++ E+F +MR   +  
Sbjct: 280 ALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLP 339

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+F+  +VL A   ++    G QIH   +K+G  S V   ++NA+M++Y +CG+  ++++
Sbjct: 340 NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV--FVSNALMDVYAKCGRMENSME 397

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F E    + V+W+  I       DG +A  LF ++     Q  E T  + L +      
Sbjct: 398 LFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 457

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           L  G QI +   K   +  V +    +S     G ++  ++ F  +I
Sbjct: 458 LEPGLQIHSLTVKPDKLTFVGV----LSACANAGLLDQGQAYFTSMI 500



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 10/250 (4%)

Query: 346 NSMIAGYSENGFFNQALDMFCHML------EFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           N+ +  +S  GF  Q+  +    +      EF    N +  A+ L+         +   +
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEF----NSHAYANALQDCIQKDEPSRGKGL 60

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  I+K G  LD    + L+  Y K + L ++ ++  E+ ++N +    L      +   
Sbjct: 61  HCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRF 120

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            EA+EL+  +     E+N   F+ +LK   +    E G  IH    K  ++ + FV +A+
Sbjct: 121 LEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTAL 180

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           ID Y  CG ++ A+  F  I    +  W  M+  +A++ C+ E   LF++M   G KP+ 
Sbjct: 181 IDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNN 240

Query: 580 ITYLAVLTSC 589
            T+ +V  +C
Sbjct: 241 FTFASVFKAC 250



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 47/94 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK G H D  +S  L+  + K      +     ++ +R+ +T+N +I G  +  
Sbjct: 362 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLG 421

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
               AL+LF  +    ++    T+SS ++AC SL
Sbjct: 422 DGEKALRLFLNMLEYRVQATEVTYSSALRACASL 455


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 185/557 (33%), Positives = 306/557 (54%), Gaps = 6/557 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D+K  +QIH   +  G        L+N++MN YV CG   DA ++F      +VVSW+  
Sbjct: 36  DLKPLQQIHAQIITSGLTHNT--FLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93

Query: 251 IAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+        VEA  +F+++   +F+ N  T+ ++L +     ++R  K +  F  + GF
Sbjct: 94  ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              V +  AL+ MY K G +  AR +F+ +  ++ V+WN++++GYS++GF  +A+D+F  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    L+ + YT+ S++ A  +   L+    +H  II++G+  D  + + L+  Y   N 
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLK 486
           ++++ RV SE+  K+      + +          A++ +  + G    +++      +L 
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           +C+    L+QG+ +H LA+K  +  +IFV SAVIDMY  CG +EDAKR F  +    +  
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WNAM+ G   +G   +  +LF +M   G+ PDE T+++VL +C HAG+V E       M 
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
               +IP L+HYAC++D+LGR G L+ A   I+ MP  PD  ++ +LL AC I+GNI LG
Sbjct: 454 KTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLG 513

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
                K+ E++P++   YVLLSN+YA AG W  V   R  ++ K + K+PG+S I +   
Sbjct: 514 HEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQE 573

Query: 727 THHFYAGDSSHSQSKEI 743
            + F AG+  H Q  +I
Sbjct: 574 IYTFMAGEKDHPQYFKI 590



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 242/487 (49%), Gaps = 36/487 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I +G   +  LS +L++ +        A +    T  ++++++  LISGLA+  
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ +F  +     +P+A T SS++ A  +L    I   VH   ++ GF   V++ +
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G +  A   F    + + V + A+V GY  +G  +++ ++F  MR  GL +
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++ +++ AS  V   + G  IHGF ++ G+ +    H+  A+M++YV      DA +
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND--KHIKTALMDIYVSHNCVDDAHR 279

Query: 235 MFDEITEPDVVSWSERIAAACDG------VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           +F E++  DV +W+  +     G      ++ F   K L   + +++   ++ +LSS   
Sbjct: 280 VFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFN--KMLGIQNLKLDSIALMGILSSCSH 337

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L+ G+++ A   K  F   + +G+A+I MY  CG + DA+  F  +  KD V WN+M
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAG   NG+   A+D+F  M    L P+  T  S+L A S++  + + +Q+  H++K+  
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 409 LLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           ++ +    +C+I   G+   L+ +   ++ +  +                      ++Y 
Sbjct: 458 VIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ-------------------PDFDVYS 498

Query: 468 TIWGSCR 474
           T+ G+CR
Sbjct: 499 TLLGACR 505



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 17/311 (5%)

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           L P     ASIL  +   K LK   Q+H+ II SG   +  + + L+  Y  C  L ++K
Sbjct: 20  LSPLAQPHASILRKL---KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK 76

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           ++      KN V    L S L    C  EA++++R +     + N  T S VL A A + 
Sbjct: 77  QIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLG 136

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            +   K++HC  ++  ++ ++FVE+A++DMY K G +  A++ F  +   ++  WNA++ 
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVS 196

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           GY+ HG   E  +LFN M + G+  D  T ++++ +    G        L   + +HG I
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGC-------LQVGTGIHGFI 249

Query: 613 PQLEH------YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            +  +         ++D+      ++ A     +M +  D   W  +L+  +   + D  
Sbjct: 250 IRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSV-KDVAAWTLMLTGFSSGRHWDRA 308

Query: 667 LLAGSKLLELQ 677
           +   +K+L +Q
Sbjct: 309 IKHFNKMLGIQ 319


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/727 (27%), Positives = 377/727 (51%), Gaps = 17/727 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           +++  +K G   D  L++ LIS +  F D   + R +FD Q  +D++++N++IS   +  
Sbjct: 262 LHAFALKGGTIDDESLTSALISMYAAFDDLSSS-RLVFDLQPVKDLVSFNSMISAYMQHS 320

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL----QENEIVHGVCLKLGFSSRVYLV 116
               A ++F  +   G+ P+  T  S++ +C  L       E VHG+ +KLG + +V +V
Sbjct: 321 NWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVV 380

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y+K G++ S+ + F    + +N+ + +M+ GY+ N E++ + + F +M+  G+ 
Sbjct: 381 SALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVA 440

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  ++  V+     + D+   + IH + V+  F S     + NA++ +Y  CG    + 
Sbjct: 441 PDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFES--YQSVMNALLAMYADCGDISTSY 498

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F ++    ++SW+  I   A   D   +  LF  +   +   +  T+I L+SS+    
Sbjct: 499 TLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSE 558

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G+ + +   K G +  VS+ NALI+MY  CG V   + +F+    ++++++N++++
Sbjct: 559 DAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMS 618

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY +N    + L +F  M++    PN  T+ ++L      +S  Q   +HS+ +++   L
Sbjct: 619 GYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC---QSQLQGKCIHSYAVRNFTRL 675

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + +  +  Y + N +   + + S +  +N +  NA  S  V        ++ ++ + 
Sbjct: 676 ETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHML 735

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 +  T   ++ AC+ + + +    I  + L+  +  +I V +A+ID + +CG+I 
Sbjct: 736 FLNVRPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSIS 795

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A+  F          W AM+  Y+ HG      +LF+ M   GV PD+IT++++L++C 
Sbjct: 796 FARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACS 855

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H GLV + RT    +   HG+ P++EHYAC+VDLLGR G L+ A   +  MP  P  ++ 
Sbjct: 856 HNGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLL 915

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +SLL AC  +GN  +G   G  L++ +     +YV+LSN+YASAG W+D  +LR +M+ K
Sbjct: 916 ESLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEAK 975

Query: 711 FLCKEPG 717
            L K  G
Sbjct: 976 GLRKNVG 982



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 181/709 (25%), Positives = 328/709 (46%), Gaps = 48/709 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ L   G   D  + T L+  +  F     A   LF    R      +L   +  F 
Sbjct: 59  EIHARLAVAGAIQDRFVVTGLVERYVSFGKPASA-ALLFAEAYRGRPAVYSLNLVVRCFS 117

Query: 61  QSGPALKLFDRLR-YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
             G   +L D  R   G   D FTF  +++AC +   LQ    VH   L+ G  S V + 
Sbjct: 118 DHGFHRELLDLYRGLCGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQ 177

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  ++ YAK+G+I  +   F DC+ L D +++ AMV GY  NG F ++ E   EM+  G+
Sbjct: 178 TALLDMYAKAGQIDVSRRVF-DCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGM 236

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  +L  ++   G++ D   G+ +H F +K G +      L +A++++Y        +
Sbjct: 237 SPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDD--ESLTSALISMYAAFDDLSSS 294

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD     D+VS++  I+A     +  EAF +F+ +       N  T++++L S    
Sbjct: 295 RLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDL 354

Query: 290 RI-LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  G+ +     K+G  E VS+ +AL+SMY K G+++ +  +F     K+++ WNSM
Sbjct: 355 LFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSM 414

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GY  N  +N ALD FC M    + P+  T+ +++     +K L  A  +H++ +++ F
Sbjct: 415 ISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRF 474

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
               S+++ L+  Y  C  ++ S  +  +++ +  +  N + S          +L L+  
Sbjct: 475 ESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQ 534

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++      +  T   ++ + +   D   G+++H LA+K+    D+ + +A+I MY  CG 
Sbjct: 535 MFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGI 594

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT- 587
           +E  ++ F   C  +   +NA+M GY ++    ++  LF +M K   KP+ +T L +L  
Sbjct: 595 VEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPV 654

Query: 588 -------SCCHAGLVR-----EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL---- 631
                   C H+  VR     E   + S M  ++     +E+   I  L+    L+    
Sbjct: 655 CQSQLQGKCIHSYAVRNFTRLETPLFTSAMG-MYSRFNNIEYCRTIFSLVSARNLIVWNA 713

Query: 632 --------EGAKMTIDQ------MPIPPDAHIWQSLLSACTIYGNIDLG 666
                   + A M +D       + + PD     +L+SAC+  GN D  
Sbjct: 714 FLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFA 762



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 133/273 (48%), Gaps = 6/273 (2%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK-KNAVH-INAL 449
           SLK   ++H+ +  +G + D  +++ L+  Y        +  + +E  + + AV+ +N +
Sbjct: 53  SLKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLV 112

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
                    H E L+LYR + G   +    TF  V++AC A + L+ G+ +HC  L+  +
Sbjct: 113 VRCFSDHGFHRELLDLYRGLCGFGSD--NFTFPPVIRACTAASCLQLGRQVHCRVLRTGH 170

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             ++ V++A++DMY K G I+ ++R F  +    L  WNAM+ GY+ +GC+ E      +
Sbjct: 171 GSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQE 230

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M + G+ P+  T + ++  C  AG  R A   L   +   G I      + ++ +     
Sbjct: 231 MQQCGMSPNASTLVGIVGMCGSAG-DRVAGDSLHAFALKGGTIDDESLTSALISMYAAFD 289

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
            L  +++  D  P+  D   + S++SA   + N
Sbjct: 290 DLSSSRLVFDLQPV-KDLVSFNSMISAYMQHSN 321


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 293/545 (53%), Gaps = 12/545 (2%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFG---LFKDLRF-NDFQINEY 277
           +YV+CG+   A ++F  + + +VVSW+  +       +A G   L  ++R  ++   NEY
Sbjct: 1   MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+   L +        AG  I   C + G+ E   + ++L+ +Y K G++ DAR +FD  
Sbjct: 61  TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120

Query: 338 IFKDSV-SWNSMIAGYSENGFFNQALDMFCHML--EFSLIPNGYTMASILEAVSNSKSLK 394
                + +WN+M++GY+  G    AL +F  M   E    P+ +T AS+L+A S   + +
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180

Query: 395 QAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           +  QVH+ +  SGF    + I    L+  Y KC  L  + +V   +++KN +   A+   
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                   EALEL+R  W S    +    S V+   A    +EQG+ +HC  +K     D
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           +   ++++DMY KCG  ++A+R FR++   ++  W  M+ G  +HG   E   LF +M  
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 360

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GV+PDE+TYLA+L++C HAGLV E R Y SC+     + P+ EHYAC+VDLLGR G L 
Sbjct: 361 GGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELR 420

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A+  I  MP+ P   +WQ+LLSAC ++ ++ +G  AG  LL +  DN   YV LSN+ A
Sbjct: 421 EARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLA 480

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG---DSSHSQSKEIYKELIK 749
            AG W +  K+R  M+ + L K+ G SW+ VG   H FY G   + +H Q+ +I + L  
Sbjct: 481 EAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540

Query: 750 LYEHM 754
           +   M
Sbjct: 541 METRM 545



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 216/448 (48%), Gaps = 26/448 (5%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFS 181
           Y K GE+  A   F    D + V++TA++ G++ +G+      +  EMR+      NE++
Sbjct: 2   YVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYT 61

Query: 182 LTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L+A L A     D   G  IHG  V+ G+     + + ++++ +Y + G+  DA ++FD 
Sbjct: 62  LSASLKACCVVGDTAAGVGIHGLCVRAGYQEH--DVVASSLVLVYSKGGRIGDARRVFDG 119

Query: 239 IT-EPDVVSWSERI---AAACDGVEAFGLFKDLRFND--FQINEYTMINLLSSVGGERIL 292
                 + +W+  +   A A  G +A  +F+++R ++   Q +E+T  +LL +  G    
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179

Query: 293 RAGKQIQAFCYKVGFMEVVS--IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           R G Q+ A     GF    +  +  AL+ MY KC ++  A  +F+ L  K+ + W +++ 
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 239

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+++ G   +AL++F         P+ + ++S++  +++   ++Q  QVH + IK     
Sbjct: 240 GHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGT 299

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D S  + ++  Y KC   +E++R+  E+   N V    + + L       EA+ L+  + 
Sbjct: 300 DVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMR 359

Query: 471 GSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLALKARYDQDIFVESA----VIDMYC 524
               E +  T+  +L AC  A + D E  +   C+    R D+ +  ++     ++D+  
Sbjct: 360 AGGVEPDEVTYLALLSACSHAGLVD-ECRRYFSCI----RRDRTVRPKAEHYACMVDLLG 414

Query: 525 KCGTIEDAKRAFRKICRDSLAG-WNAMM 551
           + G + +A+   R +  +   G W  ++
Sbjct: 415 RAGELREARDLIRTMPMEPTVGVWQTLL 442



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 184/366 (50%), Gaps = 20/366 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARF 59
           I+ L ++ G+    +++++L+  ++K      A R +FD       I T+NA++SG A  
Sbjct: 81  IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARR-VFDGAGLGSGIATWNAMVSGYAHA 139

Query: 60  CQSGPALKLFDRLR-YQGL-RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS--SR 112
                AL +F  +R ++G  +PD FTF+SL+KAC   G+ +E   VH      GFS  S 
Sbjct: 140 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 199

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
             L    ++ Y K   +  A   F      + + +TA+V G+   G+  ++ E+F     
Sbjct: 200 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 259

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G   +   L++V+G   D   V++G Q+H +G+K    +G      N+I+++Y++CG  
Sbjct: 260 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK--DPTGTDVSAGNSIVDMYLKCGLP 317

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A +MF E+  P+VVSW+  +        G EA  LF+++R    + +E T + LLS+ 
Sbjct: 318 DEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 377

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFKDSVS- 344
               ++   ++  +   +   +   +   A ++ + G+ G++ +AR +   +  + +V  
Sbjct: 378 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 437

Query: 345 WNSMIA 350
           W ++++
Sbjct: 438 WQTLLS 443


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/552 (34%), Positives = 293/552 (53%), Gaps = 36/552 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F  I EP+ +SW+  I   A + D + A  L+  +       N YT   L  S   
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  + GKQI A   K G    + +  +LISMY + G V DA  +FD             
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G + +AL++F  M++  + P+ 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TMA++L   ++S +++   Q+HS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     Y + H EAL +++ +       N  T   +L ACA +  ++ G
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330

Query: 498 KAIHCLALKARYD--QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           + IH    K       +  +++++IDMY KCG IE A + F  I   SL+  NAM+ G+A
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG      +L ++M K G++PD+IT++ +L++C HAGL    R     M+  + + P+L
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY C++DLLGR GL + A+  I+ M + PD  IW SLL AC I+ N++LG L   KL++
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMK 510

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           ++P N  +YVLLSN+YA++  W+DV ++R  + +K L K PG S I +    H F  GD 
Sbjct: 511 IEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDK 570

Query: 736 SHSQSKEIYKEL 747
            H Q+KEIYK L
Sbjct: 571 FHPQNKEIYKML 582



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 203/440 (46%), Gaps = 44/440 (10%)

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDV 192
           F+   + + +++  M+ G+  + +   +  ++V M SLGL  N ++   +  +   S   
Sbjct: 35  FKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAA 94

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA-------------------- 232
           +EG+QIH   +K G    +  H++ +++++Y + G   DA                    
Sbjct: 95  QEGKQIHAQILKYGLTVDL--HVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMIT 152

Query: 233 -----------VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYT 278
                       KMFDEI   DVVSW+  I+   +     EA  LF ++   D + +E T
Sbjct: 153 GYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDEST 212

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           M  +LS+      +  G+QI ++    GF   + + NALI +Y KCG++  A  +F+ L 
Sbjct: 213 MATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ 272

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           +KD +SWN++I GY+      +AL +F  ML+    PN  TM SIL A ++  ++     
Sbjct: 273 YKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRW 332

Query: 399 VHSHIIK--SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
           +H +I K   G + + S+ + LI  Y KC  +  + +V   I  K+    NA+       
Sbjct: 333 IHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLALKARYDQDIF 514
                A +L   +     E +  TF  +L AC  A ++DL + K    + L  R +  + 
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGR-KIFKSMTLDYRIEPKLE 451

Query: 515 VESAVIDMYCKCGTIEDAKR 534
               +ID+  + G  ++A+ 
Sbjct: 452 HYGCMIDLLGRSGLFKEAEE 471



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 221/511 (43%), Gaps = 97/511 (18%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENE 98
           Q  + +++N +I G A       AL L+  +   GL P+++TF  L K+C    + QE +
Sbjct: 39  QEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGK 98

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
            +H   LK G +  +++ +  I  YA++G +  A   F      D V+YTAM+ GY   G
Sbjct: 99  QIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRG 158

Query: 159 EFDKSK-------------------------------EVFVEMRSLGLELNEFSLTAVLG 187
             DK++                               E+F EM  + ++ +E ++  VL 
Sbjct: 159 NMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLS 218

Query: 188 A---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
               S +V+ G QIH +    GF S +   L NA+++LY +CG+   A  +F+ +   DV
Sbjct: 219 TCTHSGNVELGRQIHSWIDNHGFGSNL--KLVNALIDLYSKCGEMERAHGLFEGLQYKDV 276

Query: 245 VSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           +SW+  I   A      EA  +F+++       N+ TM+++L +      +  G+ I  +
Sbjct: 277 ISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVY 336

Query: 302 CYK--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
             K   G +   S+  +LI MY KCG +  A  +FD ++ K   S N+MI G++ +G  +
Sbjct: 337 IDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRAD 396

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNS----------KSLKQAMQVHSHIIKSGFL 409
            A D+   M +  + P+  T   +L A S++          KS+    ++   +   G  
Sbjct: 397 AAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYG-- 454

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                  C+I   G+     E++ +++ +                        +E    I
Sbjct: 455 -------CMIDLLGRSGLFKEAEELINSM-----------------------TMEPDGVI 484

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           WGS           +LKAC    +LE G+ I
Sbjct: 485 WGS-----------LLKACKIHKNLELGELI 504



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 139/319 (43%), Gaps = 39/319 (12%)

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
           C++T Y   + L  +  V   I + N +  N +      +S    AL LY  +       
Sbjct: 19  CILTPY--FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSP 76

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED----- 531
           N  TF  + K+CA     ++GK IH   LK     D+ V +++I MY + G +ED     
Sbjct: 77  NSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVF 136

Query: 532 --------------------------AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
                                     A++ F +I    +  WNAM+ GYA+ G Y E   
Sbjct: 137 DTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALE 196

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LFN+M K  VKPDE T   VL++C H+G V   R   S + D HG    L+    ++DL 
Sbjct: 197 LFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWI-DNHGFGSNLKLVNALIDLY 255

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL-QPDNESTY 684
            + G +E A    + +    D   W +L+       +    LL   ++L+L +  N+ T 
Sbjct: 256 SKCGEMERAHGLFEGLQY-KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT- 313

Query: 685 VLLSNLYASAGMWN-DVGK 702
            +LS L A A +   D+G+
Sbjct: 314 -MLSILPACAHLGAIDIGR 331



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 166/353 (47%), Gaps = 19/353 (5%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H D +  T +I+ +    +  +A +   +   +D++++NA+ISG A   +   AL+LF+ 
Sbjct: 141 HRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNE 200

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +    ++PD  T ++++  C   G+++    +H      GF S + LV+  I+ Y+K GE
Sbjct: 201 MMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGE 260

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +  A   F      D +++  ++ GY +     ++  VF EM  LG   N+ ++ ++L A
Sbjct: 261 MERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPA 320

Query: 189 -----SFDVKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLDAVKMFDEITE 241
                + D+  G  IH +  K   L G+  +  L  +++++Y +CG    A ++FD I  
Sbjct: 321 CAHLGAIDI--GRWIHVYIDKK--LKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN 376

Query: 242 PDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
             + S +  I   A       AF L   ++ +  + ++ T + LLS+     +   G++I
Sbjct: 377 KSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436

Query: 299 -QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
            ++          +     +I + G+ G   +A  + + +  + D V W S++
Sbjct: 437 FKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 198/534 (37%), Positives = 281/534 (52%), Gaps = 18/534 (3%)

Query: 232  AVKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            A   +  + + +V SW+  IA      D VEA   F  LR         +    + S   
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 289  ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               L +G+      +  GF   + + +ALI MY KCGQ+ DAR++FD +  ++ VSW SM
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 2087

Query: 349  IAGYSENGFFNQALDMFCHMLEFSL-------IP-NGYTMASILEAVSNSKSLKQAMQVH 400
            I GY +N   + AL +F   LE          +P +   M S+L A S          VH
Sbjct: 2088 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 2147

Query: 401  SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              ++K GF     + + L+  Y KC     SK+V   +++K+ +  N++ +V   +    
Sbjct: 2148 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 2207

Query: 461  EALELYRTIWGSCREV----NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
            EALE++    G  R V    N  T S VL ACA    L  GK IH   +K   + ++ V 
Sbjct: 2208 EALEVFH---GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264

Query: 517  SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            +++IDMYCKCG +E AK+ F ++   ++  W AM+ GY  HG   E  ++F KM + GVK
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324

Query: 577  PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
            P+ IT+++VL +C HAGLV E   + + M   + + P +EHY C+VDL GR G L  A  
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384

Query: 637  TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
             I +M + PD  +W SLL AC I+ N+DLG +A  KL EL PDN   YVLLSNLYA AG 
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444

Query: 697  WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            W DV ++R  MK + L K PG+S + + G  H F  GD  H   + IYK L KL
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKL 2498



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 175/370 (47%), Gaps = 31/370 (8%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A   + G      +   LI +Y   G++  A  +F  +    + +WN +I   + N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   QAL ++ +M+   +  + +T   +++A +N  S+     VH  +IK GF  D  + 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 416 SCLITTYGKCN-------------------------------ALNESKRVLSEIDKKNAV 444
           + LI  Y KC                                 L E++R+  EI  KN V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              A+ +  +      EALEL++ +       N  T   ++KAC  M  L  G+ IH  A
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K   +  +++ +A+IDMY KCG+I+DA   F  + R SL  WN+M+     HG   E  
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           NLF++M +  VKPD IT++ VL +C H   V+E   Y + M+  +G+ P  EHY C+ +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 625 LGRVGLLEGA 634
             R   L+ A
Sbjct: 404 YARSNNLDEA 413



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 211/421 (50%), Gaps = 31/421 (7%)

Query: 45   DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVH 101
            ++ ++N++I+ LAR   S  AL+ F  LR  GL P   +F   +K+C +L +     + H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038

Query: 102  GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
                  GF + +++ S  I+ Y+K G++  A   F +    + V++T+M+ GYV N + D
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098

Query: 162  KSKEVFVEMRSLGLE--------LNEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSG 210
             +  +F +      E        L+   + +VL A   V      E +HGF VK GF   
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158

Query: 211  VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
            +   + N +M+ Y +CGQ L + K+FD + E D +SW+  IA  A  G+  EA  +F  +
Sbjct: 2159 I--GVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216

Query: 268  -RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
             R    + N  T+  +L +      LRAGK I     K+     V +G ++I MY KCG+
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276

Query: 327  VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
            V  A+  FD +  K+  SW +M+AGY  +G   +ALD+F  M+   + PN  T  S+L A
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336

Query: 387  VSNSKSLKQ------AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
             S++  +++      AM+ H + I+ G         C++  +G+   LNE+  ++  +  
Sbjct: 2337 CSHAGLVEEGWHWFNAMK-HKYDIEPGI----EHYGCMVDLFGRAGCLNEAYNLIKRMKM 2391

Query: 441  K 441
            K
Sbjct: 2392 K 2392



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 167/388 (43%), Gaps = 36/388 (9%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C + +    +H   ++ G S+   L    I  Y+  G I  A + F    +     
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGV 203
           +  ++     NG  +++  ++  M   G+  ++F+   V+ A      +  G+ +HG  +
Sbjct: 93  WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152

Query: 204 KVGFLSGV------------CNHLNNA-----------------IMNLYVRCGQKLDAVK 234
           K GF   V            C H   A                 +++  + CG   +A +
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDEI   +VVSW+  I          EA  LFK ++  +   NEYTM++L+ +     I
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I  +  K      V +G ALI MY KCG + DA  +F+ +  K   +WNSMI  
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
              +G   +AL++F  M   ++ P+  T   +L A  + K++K+     + + +  G   
Sbjct: 333 LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAP 392

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEI 438
                 C+   Y + N L+E+ +   E+
Sbjct: 393 IPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 184/411 (44%), Gaps = 23/411 (5%)

Query: 322  GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            G+    N A   + Y+   +  SWNS+IA  +  G   +AL  F  + +  LIP   +  
Sbjct: 1960 GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFP 2019

Query: 382  SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
              +++ S    L      H      GF  D  + S LI  Y KC  L +++ +  EI  +
Sbjct: 2020 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 2079

Query: 442  NAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSI-------VLKACAAMTD 493
            N V   ++ +  V       AL L++       EV +G+   +       VL AC+ ++ 
Sbjct: 2080 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 2139

Query: 494  LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
                + +H   +K  +D  I V + ++D Y KCG    +K+ F  +       WN+M+  
Sbjct: 2140 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 2199

Query: 554  YAQHGCYHEVSNLFNKMSK-FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            YAQ G   E   +F+ M +  GV+ + +T  AVL +C HAG +R  +    C+ D   + 
Sbjct: 2200 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK----CIHD-QVIK 2254

Query: 613  PQLEHYAC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
              LE+  C    I+D+  + G +E AK T D+M    +   W ++++   ++G     L 
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEALD 2313

Query: 669  AGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
               K++   ++P N  T+V +    + AG+  +       MK K+   EPG
Sbjct: 2314 IFYKMVRAGVKP-NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI-EPG 2362



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 153/323 (47%), Gaps = 42/323 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I++G   D +L+  LI  ++       A    +  QN    T+N +I       
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
            S  AL L+  +  QG+  D FTF  ++KAC    S+   ++VHG  +K GFS  V++ +
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 118 GFIENYAKSGEI-----VSAEMCFRD-------------CLDLDN-------------VA 146
             I+ Y K G       V  +M  R+             C DL               V+
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +TAM+ GY+ N + +++ E+F  M++  +  NE+++ +++ A  +   +  G  IH + +
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEA 260
           K     GV  +L  A++++Y +CG   DA+++F+ +    + +W+  I +      G EA
Sbjct: 285 KNCIEIGV--YLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 261 FGLFKDLRFNDFQINEYTMINLL 283
             LF ++   + + +  T I +L
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVL 365



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 143/349 (40%), Gaps = 50/349 (14%)

Query: 372 SLIPNGYTMAS-ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            L P G   A   L  + N K+ K   Q+H+ II+SG   D  +   LI  Y     +  
Sbjct: 18  PLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAY 77

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +  +  +I        N +           +AL LY+ +       +  TF  V+KAC  
Sbjct: 78  AILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTN 137

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK------------------------- 525
              ++ GK +H   +K  +  D+FV++ +ID Y K                         
Sbjct: 138 FLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTV 197

Query: 526 ------CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
                 CG +++A+R F +I   ++  W AM+ GY ++    E   LF +M    + P+E
Sbjct: 198 ISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNE 257

Query: 580 ITYLAVLTSCCHAGLVREAR-----TYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLE 632
            T ++++ +C   G++   R        +C+        ++  Y    ++D+  + G ++
Sbjct: 258 YTMVSLIKACTEMGILTLGRGIHDYAIKNCI--------EIGVYLGTALIDMYSKCGSIK 309

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPD 679
            A    + MP       W S++++  ++  G   L L +  + + ++PD
Sbjct: 310 DAIEVFETMP-RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPD 357



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++  ++K G      +  TL+  + K      + +     + +D I++N++I+  A+   
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205

Query: 62   SGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            SG AL++F  + R+ G+R +A T S+++ AC   G+L+  + +H   +K+     V + +
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              I+ Y K G +  A+  F    + +  ++TAMV GY  +G   ++ ++F +M   G++ 
Sbjct: 2266 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 2325

Query: 178  NEFSLTAVLGASFD---VKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            N  +  +VL A      V+EG        H + ++ G     C      +++L+ R G  
Sbjct: 2326 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC------MVDLFGRAGCL 2379

Query: 230  LDAVKMFDEIT-EPDVVSWSERIAA 253
             +A  +   +  +PD V W   + A
Sbjct: 2380 NEAYNLIKRMKMKPDFVVWGSLLGA 2404



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 6/183 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           TT+IS      D + A R   +  +++++++ A+I+G  R  Q   AL+LF R++ + + 
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254

Query: 79  PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           P+ +T  SL+KAC   G L     +H   +K      VYL +  I+ Y+K G I  A   
Sbjct: 255 PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEV 314

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F          + +M+     +G   ++  +F EM  + ++ +  +   VL A     +V
Sbjct: 315 FETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374

Query: 193 KEG 195
           KEG
Sbjct: 375 KEG 377



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   IKN   +   L T LI  ++K    + A         + + T+N++I+ L     
Sbjct: 279 IHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              AL LF  +    ++PDA TF  ++ AC  ++    V   C      ++ Y ++   E
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN---VKEGCAYFTRMTQHYGIAPIPE 395

Query: 122 NYAKSGEIVSA----EMCFRDCLDLDNVAYTAMVC 152
           +Y    E+ +     +  F+   ++ ++A +  +C
Sbjct: 396 HYECMTELYARSNNLDEAFKSTKEVGSLANSPSIC 430


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 183/551 (33%), Positives = 304/551 (55%), Gaps = 5/551 (0%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G  +H   +K G  S V   ++N ++N+Y +CG    A ++FDE+ E ++VSWS  I+  
Sbjct: 22  GLSLHAAVLKTGTQSDV--FMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGY 79

Query: 255 CDGVEAFGLFKDLRFNDFQI-NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               E   +  DL    F + NEY   +++S+      +  G++I +   K G+  +  +
Sbjct: 80  DQAGEP-QMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N+LISMY KC Q +DA S+F      + VS+N++I G+ EN    + L+ F  M +  L
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           IP+ +    +L   + +++LK+  ++H   +K        + + +IT Y + N + E+++
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMT 492
               I++K+ +  N L +   +   HA+ L +++ +        +  TF+  L ACA + 
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            +  GK IH   ++ R  QD+ V +A+++MY KCG I  A   F K+   +L  WN ++ 
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G+  HG       LF +M+  G++PD +T++ +LT+C HAGLV + + Y + M + +G+ 
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIA 438

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P +EH++C++D+LGR G L  A+  + + P   D  +  SLLSA  ++G++ +G      
Sbjct: 439 PDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKW 498

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           LL+LQP   S YVLLSNLYAS GMW+ V + RK +K   L KEPG+S I V G    F  
Sbjct: 499 LLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNGSVEKFTI 558

Query: 733 GDSSHSQSKEI 743
           GD +H + KEI
Sbjct: 559 GDFTHLRIKEI 569



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 238/479 (49%), Gaps = 30/479 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK-----FADFRRAFRFLFDTQNRDIITYNALISGL 56
           +++ ++K G   D  +S  +++ + K     FA  R+ F  +F+   +++++++A+ISG 
Sbjct: 25  LHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFA--RQVFDEMFE---KNLVSWSAMISGY 79

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRV 113
            +  +   A+ L+ ++    L P+ + F+S++ AC SL      + +H   LK G+ S  
Sbjct: 80  DQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESIS 136

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  I  Y K  +   A   F +  + + V+Y A++ G+V N + ++  E F  MR  
Sbjct: 137 FVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQ 196

Query: 174 GLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           GL  + F+   VLG    + ++K G ++H   VK+   S     + N I+ +Y       
Sbjct: 197 GLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDS--TPFIGNVIITMYSELNLIQ 254

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDL-RFNDFQINEYTMINLLSSV 286
           +A K F  I E DV+SW+  IAA     D  +   +FK +    + + +++T  + L++ 
Sbjct: 255 EAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAAC 314

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G   +  GKQI A   +    + + +GNAL++MY KCG +  A  IF  ++  + VSWN
Sbjct: 315 AGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWN 374

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++IAG+  +G   +A+++F  M    + P+  T   +L A  N   L    Q++ + ++ 
Sbjct: 375 TIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTAC-NHAGLVDKGQLYFNSMEE 433

Query: 407 --GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
             G   D    SCLI   G+   LNE++  + +    N   +  L S+L  +  H + +
Sbjct: 434 TYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVV--LVSLLSASRLHGDVV 490



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 212/460 (46%), Gaps = 43/460 (9%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ +LL      + LR G  + A   K G    V + N +++MY KCG    AR +FD +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             K+ VSW++MI+GY + G    A+D++  M    L+PN Y  AS++ A ++  ++    
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           ++HS  +K G+     + + LI+ Y KCN  +++  V +   + N V  NAL +  V   
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
                LE ++ +       +   F  VL  C    +L++G  +HC  +K   D   F+ +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-KFGVK 576
            +I MY +   I++A++AFR I    +  WN ++   +    + +   +F  M+ +  V+
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301

Query: 577 PDEITYLAVLTSCC-----------HAGLVREARTY---------------LSCMSDLHG 610
           PD+ T+ + L +C            HA L+R  R Y                 C+   + 
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMR-TRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 611 LIPQLEH-----YACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLSACTIYGN 662
           +  ++ H     +  I+   G  GL E A    +QM    I PD+  +  LL+AC   G 
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 663 IDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWND 699
           +D G L  + + E   + PD E  +  L ++   AG  N+
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEH-FSCLIDMLGRAGRLNE 459



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 222/468 (47%), Gaps = 18/468 (3%)

Query: 83  TFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           T SSL+  C    +L+    +H   LK G  S V++ +  +  YAK G    A   F + 
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGE 196
            + + V+++AM+ GY   GE   + +++ +M    L  NE+   +V+ A      V  G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           +IH   +K G+ S   + ++N+++++Y++C Q  DA+ +F    EP+ VS++  I    +
Sbjct: 122 KIHSRSLKFGYES--ISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179

Query: 257 GVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             +       FK +R      + +  + +L        L+ G ++     K+       I
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           GN +I+MY +   + +A   F  +  KD +SWN++IA  S      + L +F HM E + 
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299

Query: 374 I-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           + P+ +T  S L A +   S+    Q+H+H++++    D  + + L+  Y KC  +  + 
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            + S++   N V  N + +          A+EL+  +  S    +  TF  +L AC    
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419

Query: 493 DLEQGKAIHCLALKARYD--QDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            +++G+ ++  +++  Y    DI   S +IDM  + G + +A+   RK
Sbjct: 420 LVDKGQ-LYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRK 466



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 18/360 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+S  +K G+     +S +LIS + K      A     +T   + ++YNALI+G     
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L+ F  +R QGL PD F F  ++  C +   L+    +H   +KL   S  ++ +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLE 176
             I  Y++   I  AE  FR   + D +++  ++       +  K   VF  M     + 
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F+ T+ L A      +  G+QIH   ++      +   + NA++N+Y +CG    A 
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDL--GVGNALVNMYAKCGCIGYAY 359

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F ++   ++VSW+  IA   +   G  A  LF+ +  +  + +  T I LL++     
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAG 419

Query: 291 ILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           ++  G+    +     G    +   + LI M G+ G++N+A        F     WN  +
Sbjct: 420 LVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPF-----WNDPV 474


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 208/742 (28%), Positives = 379/742 (51%), Gaps = 41/742 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  ++  L++ + KF   +       +   RD++ +N ++           A+ L     
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS-A 132
             GL P+  T   L +  G   +                    +G ++++A   +  S +
Sbjct: 239 SSGLNPNEITLRLLARISGDDSD--------------------AGQVKSFANGNDASSVS 278

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
           E+ FR+            +  Y+ +G++    + F +M    +E ++ +   +L  +  V
Sbjct: 279 EIIFRN----------KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328

Query: 193 KE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
                G+Q+H   +K+G    +   ++N+++N+Y +  +   A  +FD ++E D++SW+ 
Sbjct: 329 DSLALGQQVHCMALKLGL--DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG-ERILRAGKQIQAFCYKV 305
            IA        VEA  LF  L     + ++YTM ++L +       L   KQ+     K+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
             +    +  ALI  Y +   + +A  +F+   F D V+WN+M+AGY+++   ++ L +F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLF 505

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M +     + +T+A++ +      ++ Q  QVH++ IKSG+ LD  + S ++  Y KC
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             ++ ++     I   + V    + S  +       A  ++  +       +  T + + 
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           KA + +T LEQG+ IH  ALK     D FV ++++DMY KCG+I+DA   F++I   ++ 
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNAM++G AQHG   E   LF +M   G+KPD++T++ VL++C H+GLV EA  ++  M
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
              +G+ P++EHY+C+ D LGR GL++ A+  I+ M +   A ++++LL+AC + G+ + 
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G    +KLLEL+P + S YVLLSN+YA+A  W+++   R  MK   + K+PG+SWI V  
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865

Query: 726 YTHHFYAGDSSHSQSKEIYKEL 747
             H F   D S+ Q++ IY+++
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKV 887



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 183/696 (26%), Positives = 316/696 (45%), Gaps = 68/696 (9%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS-----GPALKLFDR 71
           L   LIS ++K      A R      +RD++++N++++  A+  +        A  LF  
Sbjct: 76  LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           LR   +     T S ++K C   G +  +E  HG   K+G     ++    +  Y K G+
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +   ++ F +    D V +  M+  Y+  G  +++ ++     S GL  NE +L  +   
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI 255

Query: 189 SFDVKEGEQIHGF--GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           S D  +  Q+  F  G     +S +     N  ++ Y+  GQ    +K F ++ E DV  
Sbjct: 256 SGDDSDAGQVKSFANGNDASSVSEII--FRNKGLSEYLHSGQYSALLKCFADMVESDV-- 311

Query: 247 WSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
                   CD V                   T I +L++      L  G+Q+     K+G
Sbjct: 312 -------ECDQV-------------------TFILMLATAVKVDSLALGQQVHCMALKLG 345

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
              ++++ N+LI+MY K  +   AR++FD +  +D +SWNS+IAG ++NG   +A+ +F 
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405

Query: 367 HMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
            +L   L P+ YTM S+L+A S+  + L  + QVH H IK   + D  + + LI  Y + 
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             + E++ +L E    + V  NA+ +    +    + L+L+  +       +  T + V 
Sbjct: 466 RCMKEAE-ILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           K C  +  + QGK +H  A+K+ YD D++V S ++DMY KCG +  A+ AF  I      
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY--LAVLTSCCHAGLVREARTY-- 601
            W  M+ G  ++G      ++F++M   GV PDE T   LA  +SC  A  + + R    
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA--LEQGRQIHA 642

Query: 602 ----LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK---MTIDQMPIPPDAHIWQSLL 654
               L+C +D     P +     +VD+  + G ++ A      I+ M I      W ++L
Sbjct: 643 NALKLNCTND-----PFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA----WNAML 691

Query: 655 SACTIY--GNIDLGLLAGSKLLELQPDNESTYVLLS 688
                +  G   L L    K L ++PD  +   +LS
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 249/493 (50%), Gaps = 38/493 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++ + +K G  L   +S +LI+ + K   F  A R +FD  + RD+I++N++I+G+A+ 
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA-RTVFDNMSERDLISWNSVIAGIAQN 394

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE----NEIVHGVCLKLGFSSRVYL 115
                A+ LF +L   GL+PD +T +S++KA  SL E    ++ VH   +K+   S  ++
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454

Query: 116 VSGFIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
            +  I+ Y+++  +  AE+ F R   DL  VA+ AM+ GY  + +  K+ ++F  M   G
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNFDL--VAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              ++F+L  V    G  F + +G+Q+H + +K G+   +   +++ I+++YV+CG    
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW--VSSGILDMYVKCGDMSA 570

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A   FD I  PD V+W+  I+   +  E   AF +F  +R      +E+T+  L  +   
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G+QI A   K+       +G +L+ MY KCG ++DA  +F  +   +  +WN+M
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSG 407
           + G +++G   + L +F  M    + P+  T   +L A S+S  + +A + + S     G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
              +    SCL    G+   + +++              N + S+ + AS       +YR
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAE--------------NLIESMSMEASA-----SMYR 791

Query: 468 TIWGSCREVNGST 480
           T+  +CR V G T
Sbjct: 792 TLLAACR-VQGDT 803



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 33/190 (17%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L+     +DL  GK  H   L    + + F+ + +I MY KCG++  A+R F K+    L
Sbjct: 46  LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105

Query: 545 AGWNAMMMGYAQHG-CYHEVSN----LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
             WN+++  YAQ   C  E       LF  + +  V    +T   +L  C H+G V  + 
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLG-------------RVGLLEGAKMTIDQMPIPPD 646
           ++       HG       YAC + L G             + G ++  K+  ++MP   D
Sbjct: 166 SF-------HG-------YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RD 210

Query: 647 AHIWQSLLSA 656
             +W  +L A
Sbjct: 211 VVLWNLMLKA 220


>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
 gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
          Length = 688

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/690 (29%), Positives = 365/690 (52%), Gaps = 32/690 (4%)

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D  T    +KAC G L+    +HG     GF+S V + +  +  Y K+G   +A   F +
Sbjct: 2   DEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 61

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---- 194
            +D D V++  ++ G+  N     +    V M+S G+  + F+ +  L  SF V      
Sbjct: 62  LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTAL--SFCVGSEGFL 116

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G Q+    VK G  S +   + N+ + +Y R G    A ++FDE++  D++SW+  ++ 
Sbjct: 117 LGLQLQSTVVKTGLESDLV--VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 174

Query: 254 ACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                  G EA  +F+D+     +++  +  +++++   E  L+  +QI   C K G+  
Sbjct: 175 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 234

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
           ++ +GN L+S Y KCG +   +S+F  +  ++ VSW +MI+   ++     A+ +F +M 
Sbjct: 235 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMR 289

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              + PN  T   ++ AV  ++ +K+ +++H   IK+GF+ + S+ +  IT Y K  AL 
Sbjct: 290 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 349

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           ++K+   +I  +  +  NA+ S         EAL+++ +        N  TF  VL A A
Sbjct: 350 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIA 408

Query: 490 AMTDL--EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
              D+  +QG+  H   LK   +    V SA++DMY K G I+++++ F ++ + +   W
Sbjct: 409 FAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVW 468

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            +++  Y+ HG +  V NLF+KM K  V PD +T+L+VLT+C   G+V +     + M +
Sbjct: 469 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 528

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           ++ L P  EHY+C+VD+LGR G L+ A+  + ++P  P   + QS+L +C ++GN+ +G 
Sbjct: 529 VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGA 588

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
                 +E++P+   +YV + N+YA    W+   ++RK M++K + KE G+SWI VG   
Sbjct: 589 KVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTE 648

Query: 728 -----HHFYAGDSSHSQSKEIYK--ELIKL 750
                  F +GD SH +S EIY+  E+I L
Sbjct: 649 GSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 678



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 291/558 (52%), Gaps = 36/558 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+     +G      +S  ++  + K   F  A     +  + D++++N ++SG   F 
Sbjct: 22  QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---FD 78

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GS------LQENEIVHGVCLKLGFSSRV 113
            +  AL    R++  G+  DAFT+S+ +  C GS      LQ    +    +K G  S +
Sbjct: 79  DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ----LQSTVVKTGLESDL 134

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRS 172
            + + FI  Y++SG    A   F +    D +++ +++ G    G F  ++  +F +M  
Sbjct: 135 VVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR 194

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+EL+  S T+V+       D+K   QIHG  +K G+ S +   + N +M+ Y +CG  
Sbjct: 195 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL--EVGNILMSRYSKCGV- 251

Query: 230 LDAVK-MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           L+AVK +F +++E +VVSW+  I++  D  +A  +F ++RF+    NE T + L+++V  
Sbjct: 252 LEAVKSVFHQMSERNVVSWTTMISSNKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKC 309

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              ++ G +I   C K GF+   S+GN+ I++Y K   + DA+  F+ + F++ +SWN+M
Sbjct: 310 NEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAM 369

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKS 406
           I+G+++NGF ++AL MF      ++ PN YT  S+L A++ ++  S+KQ  + H+H++K 
Sbjct: 370 ISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 428

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---AL 463
           G      + S L+  Y K   ++ES++V +E+ +KN        S++   S H +    +
Sbjct: 429 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF---VWTSIISAYSSHGDFETVM 485

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVID 521
            L+  +       +  TF  VL AC     +++G  I  + ++  Y+ +   E  S ++D
Sbjct: 486 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV-YNLEPSHEHYSCMVD 544

Query: 522 MYCKCGTIEDAKRAFRKI 539
           M  + G +++A+    ++
Sbjct: 545 MLGRAGRLKEAEELMSEV 562


>gi|413915870|gb|AFW55802.1| hypothetical protein ZEAMMB73_686110 [Zea mays]
          Length = 810

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 218/727 (29%), Positives = 354/727 (48%), Gaps = 26/727 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D   S  L+ H++K      A     +T +R+ +T+ A++S  AR    G  L+LF  + 
Sbjct: 93  DTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAARGGAPGLGLRLFASML 152

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
             G  P+ F  +S + AC      ++     +HG+ ++       Y+ S  +  YAK G 
Sbjct: 153 RSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGNPYVGSSLMLVYAKHGR 212

Query: 129 IVSAEMCFRDCLD--LDNVAYTAMVCGYVWNGE-FDKSKEVFVEMRSLGLELNEFSLTAV 185
           + +AE  F        D   + AM+ GYV NG  +D ++ V + M   G+  + F+  + 
Sbjct: 213 VAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVAL-MHGSGIAPDMFTYISA 271

Query: 186 LGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
             AS+  ++   G Q+HG  V+   L      + NA+M++Y + GQK  A  +F +I   
Sbjct: 272 AKASWIARDLYFGRQVHGLVVR-SVLESNNTSVMNALMDMYFKAGQKETAADIFGKIRWK 330

Query: 243 DVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           D VSW+  I+   D   A   F D+     + N+ T   +L   G       G QI    
Sbjct: 331 DTVSWNTMISGLEDERAAADCFVDMARCGCRSNQVTFSVMLRLSGAS----LGLQIFGLA 386

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
           Y+ G+ + V + NA I+M  +CG ++ A   F  L  ++ V+WN MIAGY  +G    A+
Sbjct: 387 YRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNVVTWNEMIAGYGLHGCSGDAM 446

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  ++ F   P+ +T  ++L A       +   QVH+ ++K GF     + + LI   
Sbjct: 447 RLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHASVLKQGFASCQFVSTSLIKAK 506

Query: 423 GKCNALNESK----RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
               AL  S     +++ +  + + V      S  V      EAL L+ +    C E   
Sbjct: 507 A---ALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDCPEKPD 563

Query: 479 S-TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
                 +L ACA    + Q + IH L ++  + + + V SA++D Y KCG I  AK AF 
Sbjct: 564 EFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSALVDAYAKCGDITAAKGAFA 623

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK-PDEITYLAVLTSCCHAGLVR 596
            +       +N M+  YA HG   EV +L+ +M++  +  P   T++A +++C H GLV 
Sbjct: 624 TVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATFVAAISACSHLGLVE 683

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           + +   S M   HG+ P   +YAC++DLL R GLLE A   I  MP  P   +W+SL++ 
Sbjct: 684 QGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAMPFQPWPAVWRSLMNG 743

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C I+GN +LGLLA  ++L + P+++  YV LS++YA  G W      R++M E  + K  
Sbjct: 744 CRIHGNKELGLLASEQILRMAPNSDGAYVSLSHVYAEDGDWRSAEDARRKMAENQVHKAQ 803

Query: 717 GYSWIHV 723
           GYS + +
Sbjct: 804 GYSSLQI 810



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 190/405 (46%), Gaps = 22/405 (5%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI-AA 253
           G Q+H  G+K+G +     + +N ++  Y + GQ   A+ +FDE    + V+W+  + AA
Sbjct: 77  GSQLHASGIKLGVVFAD-TYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAA 135

Query: 254 ACDGVEAFG--LFKDLRFNDFQINEYTMINLLSS----VGGERILRAGKQIQAFCYKVGF 307
           A  G    G  LF  +  + F  NE+ + + L +    V  +  ++ G  +     +   
Sbjct: 136 ARGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAAD--VKLGLSLHGLAVRAVL 193

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLI--FKDSVSWNSMIAGYSENGFFNQALDMF 365
                +G++L+ +Y K G+V  A  +F  +    +D   WN+M+ GY  NG    A    
Sbjct: 194 HGNPYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTV 253

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGK 424
             M    + P+ +T  S  +A   ++ L    QVH  +++S    ++ S+++ L+  Y K
Sbjct: 254 ALMHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFK 313

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA-LELYRTIWGSCREVNGSTFSI 483
                 +  +  +I  K+ V  N + S L      A+  +++ R     CR  N  TFS+
Sbjct: 314 AGQKETAADIFGKIRWKDTVSWNTMISGLEDERAAADCFVDMARC---GCRS-NQVTFSV 369

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L+   A   L+    I  LA +  Y  ++ V +A I+M  +CG +  A   F  +   +
Sbjct: 370 MLRLSGASLGLQ----IFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRN 425

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  WN M+ GY  HGC  +   LF  +  FG +PDE TY AVL++
Sbjct: 426 VVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSA 470



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 177/390 (45%), Gaps = 18/390 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L  ++G+  + +++   I+  ++      A+ +  D   R+++T+N +I+G     
Sbjct: 381 QIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNVVTWNEMIAGYGLHG 440

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            SG A++LF  L   G RPD FT+ +++ A       + +E VH   LK GF+S  ++ +
Sbjct: 441 CSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHASVLKQGFASCQFVST 500

Query: 118 GFIENYAKSGEIVSAEM-CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I+  A  G  V   +   +D  ++D V++   +  +V +G   ++  +F   R    E
Sbjct: 501 SLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDCPE 560

Query: 177 -LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +EF L  +L A  +   +++   IH   V+ G    +C  +++A+++ Y +CG    A
Sbjct: 561 KPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLC--VSSALVDAYAKCGDITAA 618

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL-RFNDFQINEYTMINLLSSVGG 288
              F  ++  D + ++  + A A  G+  E   L++++ +         T +  +S+   
Sbjct: 619 KGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATFVAAISACSH 678

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFKD-SVSWN 346
             ++  GK + +       M       A LI +  + G + +A  +   + F+     W 
Sbjct: 679 LGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAMPFQPWPAVWR 738

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           S++ G   +G  N+ L +        + PN
Sbjct: 739 SLMNGCRIHG--NKELGLLASEQILRMAPN 766


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/608 (31%), Positives = 314/608 (51%), Gaps = 71/608 (11%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           N I++ Y + G+   A ++FD I   D VSW+  I          +A  +F D+  +   
Sbjct: 45  NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK---------- 323
             ++T+ N+L+S         GK++ +F  K+G    V + N+L++MY K          
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 324 ---------------------CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
                                CG+V+ A + F+ L  +D VSWNSMIAG +++GF N+AL
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224

Query: 363 DMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             F  +L + SL P+ +++AS L A +N + L    Q+H +I+++ F    ++ + LI+ 
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284

Query: 422 YGKCNALNESKRVLSE---------------------------------IDKKNAVHINA 448
           Y K   +  ++R++ +                                 +   + V   A
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +    V    + +A+E+++T+       N  T + +L A +++T L  GK IH  A+++ 
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
                 V +A+  MY K G+I  A++ F   +  RD+++ W +M+M  AQHG   E   L
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVS-WTSMIMALAQHGLGEEAIEL 463

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           F +M   G+KPD ITY+ VL++C H GLV + R+Y   M ++H + P L HYAC+VDL G
Sbjct: 464 FEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFG 523

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
           R GLL+ A   ++ MP+ PD   W SLLS+C +Y N+DL  +A  +LL ++P+N   Y  
Sbjct: 524 RAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSA 583

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           L+N+Y+S G W+D  K+RK MK + + KE G SW+ +   TH F   D  H Q  EIYK 
Sbjct: 584 LANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKM 643

Query: 747 LIKLYEHM 754
           + K+++ +
Sbjct: 644 MDKIWKEI 651



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 243/526 (46%), Gaps = 90/526 (17%)

Query: 1   QIYSLLIKNGHHLD--------PILST----TLISHFTKFADFRRAFRFLFDTQNRDIIT 48
            + +L  K G HLD        P+ +T    T++S + K     +A +       RD ++
Sbjct: 15  NLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVS 74

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCL 105
           +  +I G  +  +   A+K+F  +    + P  FT ++++ +C   GS    + VH   +
Sbjct: 75  WTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVV 134

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMV-----CGYV---- 155
           KLG  + V + +  +  YAK+G++  A++ F D + L N  ++ AM+     CG V    
Sbjct: 135 KLGLHACVPVANSLLNMYAKTGDLKMAKVVF-DRMKLRNTSSWNAMISLHMNCGRVDLAL 193

Query: 156 -------------WNG--------EFDKSKEVFVE--MRSLGLELNEFSLTAVLGASFDV 192
                        WN          FD     F    ++   L+ + FSL + L A  ++
Sbjct: 194 AQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANL 253

Query: 193 KE---GEQIHGFGVKVGFLS--GVCNHLNN-----------------------------A 218
           ++   G+QIHG+ V+  F +   V N L +                             A
Sbjct: 254 EKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTA 313

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQIN 275
           ++N YV+ G    A ++F+ + +PDVV+W+  I     +G+  +A  +FK +     + N
Sbjct: 314 LLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPN 373

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
            +T+  +LS+      L  GKQI A   + G     S+GNAL +MY K G +N AR +F+
Sbjct: 374 SFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFN 433

Query: 336 YL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
            L   +D+VSW SMI   +++G   +A+++F  ML   + P+  T   +L A ++   ++
Sbjct: 434 LLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVE 493

Query: 395 QAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           Q  + +  ++K+   +D ++   +C++  +G+   L E+ + +  +
Sbjct: 494 QG-RSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 48/353 (13%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQE---NEI 99
           RDI+++N++I+G  +      AL+ F   L+   L+PD F+ +S + AC +L++    + 
Sbjct: 202 RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQ 261

Query: 100 VHGVCLKLGFSSR---------VYLVSGFIE------------------------NYAKS 126
           +HG  ++  F +          +Y  SG +E                         Y K 
Sbjct: 262 IHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKL 321

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G+I  A   F    D D VA+TAM+ GYV NG  + + EVF  M S G   N F+L A+L
Sbjct: 322 GDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAML 381

Query: 187 GASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-P 242
            AS  V     G+QIH   ++ G    +   + NA+  +Y + G    A K+F+ + +  
Sbjct: 382 SASSSVTSLNHGKQIHASAIRSG--EALSPSVGNALTTMYAKAGSINGARKVFNLLRQNR 439

Query: 243 DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D VSW+  I A      G EA  LF+ +     + +  T + +LS+     ++  G+   
Sbjct: 440 DTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYF 499

Query: 300 AFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
                V  ++  +S    ++ ++G+ G + +A    + +  + D ++W S+++
Sbjct: 500 DLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/482 (21%), Positives = 191/482 (39%), Gaps = 104/482 (21%)

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN-------- 355
           K+G    V + N L+++Y K G   DA  +F+ +  K + SWN++++GY++         
Sbjct: 3   KLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQ 62

Query: 356 -----------------------GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
                                  G F  A+ +F  M++  ++P  +T+ ++L + + + S
Sbjct: 63  VFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGS 122

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
                +VHS ++K G      + + L+  Y K   L  +K V   +  +N    NA+ S+
Sbjct: 123 RGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISL 182

Query: 453 --------------------------LVYASCHA-----EALELYRTIWGSCREVNGSTF 481
                                      + A C+      EAL+ + +I      +    F
Sbjct: 183 HMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDT-SLKPDRF 241

Query: 482 SI--VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR----- 534
           S+   L ACA +  L  GK IH   ++  +D    V +A+I MY K G +E A+R     
Sbjct: 242 SLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQS 301

Query: 535 ----------------------------AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
                                        F  +    +  W AM++GY Q+G  ++   +
Sbjct: 302 GISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEV 361

Query: 567 FNKMSKFGVKPDEITYLAVLT-SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           F  M   G +P+  T  A+L+ S     L    + + S +     L P + +   +  + 
Sbjct: 362 FKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMY 419

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL--QPDNEST 683
            + G + GA+   + +    D   W S++ A   +G  +  +    ++L L  +PD+  T
Sbjct: 420 AKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDH-IT 478

Query: 684 YV 685
           YV
Sbjct: 479 YV 480



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 151/331 (45%), Gaps = 46/331 (13%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           LD I  T L++ + K  D   A +     ++ D++ + A+I G  +   +  A+++F  +
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365

Query: 73  RYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
             +G RP++FT ++++ A     SL   + +H   ++ G +    + +     YAK+G I
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425

Query: 130 VSAEMCFRDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
             A   F     + D V++T+M+     +G  +++ E+F +M +LG++ +  +   VL A
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485

Query: 189 SFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDV 244
                 V++G         V  +    +H    +++L+ R G   +A K  + +  EPDV
Sbjct: 486 CTHGGLVEQGRSYFDLMKNVHKIDPTLSHY-ACMVDLFGRAGLLQEAYKFVENMPMEPDV 544

Query: 245 VSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           ++W   + ++C       ++K++               L+ V  ER+L            
Sbjct: 545 IAWGS-LLSSCK------VYKNVD--------------LAKVAAERLL------------ 571

Query: 305 VGFMEVVSIG--NALISMYGKCGQVNDARSI 333
              +E  + G  +AL ++Y  CG+ +DA  I
Sbjct: 572 --LIEPNNSGAYSALANVYSSCGKWDDAAKI 600



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 58/252 (23%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
           QI++  I++G  L P +   L + + K       R+ F  L   QNRD +++ ++I  LA
Sbjct: 395 QIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLL--RQNRDTVSWTSMIMALA 452

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQEN----------------EI 99
           +      A++LF+++   G++PD  T+  ++ AC  G L E                  +
Sbjct: 453 QHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTL 512

Query: 100 VHGVCL-----KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC-----LDLDNV---- 145
            H  C+     + G     Y    F+EN     ++++       C     +DL  V    
Sbjct: 513 SHYACMVDLFGRAGLLQEAY---KFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAER 569

Query: 146 ----------AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEG 195
                     AY+A+   Y   G++D + ++   M++ G++  +       G S+ V+  
Sbjct: 570 LLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQ-------GLSW-VQIQ 621

Query: 196 EQIHGFGVKVGF 207
            + H FGV+ G 
Sbjct: 622 NKTHVFGVEDGL 633


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 211/677 (31%), Positives = 342/677 (50%), Gaps = 17/677 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           F  L K   S+      H   +  GF + + L++   +  +  G I  A   F      D
Sbjct: 23  FLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPD 82

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNE----FSLTAVLGASFDVKEGEQI 198
              +  ++ G+  N     S  VF  +R S  L+ N     F+++A  G   D + G  I
Sbjct: 83  VFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFR-DDRAGCVI 141

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG- 257
           HG  +  G  S +   L + I+ +Y +  +  DA K+FD + E D + W+  I+      
Sbjct: 142 HGQAIVDGCDSELL--LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199

Query: 258 --VEAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             VE+  +F+DL  N+   +++  T++++L +V   + LR G QI +   K G      +
Sbjct: 200 MYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV 258

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
               IS+Y KCG++  A ++F      D V++N+MI GY+ NG    +L +F  ++    
Sbjct: 259 LTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
                T+ S+   V  S  L     +H + +KS FL   S+ + L T Y K N +  +++
Sbjct: 319 KLKSSTLVSL---VPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARK 375

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           +  E  +K+    NA+ S         +A+ L+R +  S    N  T + +L ACA +  
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGA 435

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GK +H L     ++  I+V +A+I MY KCG+I +A+R F  + + +   WN M+ G
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISG 495

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   E   +F++M   G+ P  +T+L VL +C HAGLV+E     + M   +G  P
Sbjct: 496 YGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            ++HYAC+VD+LGR G L+ A   I+ MPI P   +W++LL AC I+ + +L      KL
Sbjct: 556 SVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKL 615

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            EL PDN   +VLLSN++++   +     +R+  K++ L K PGY+ I +G   H F +G
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675

Query: 734 DSSHSQSKEIYKELIKL 750
           D SH Q K I+++L KL
Sbjct: 676 DQSHPQVKAIHEKLEKL 692



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 162/359 (45%), Gaps = 10/359 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+SL  K G +    + T  IS ++K    + A     + +  DI+ YNA+I G     
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNG 301

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           ++  +L LF  L   G +  + T  SLV   G L     +HG  LK  F S   + +   
Sbjct: 302 ETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALT 361

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y+K  EI SA   F +  +    ++ AM+ GY  NG  + +  +F EM++     N  
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPV 421

Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++T +L A   +     G+ +H       F S +  +++ A++ +Y +CG   +A ++FD
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSI--YVSTALIGMYAKCGSIAEARRLFD 479

Query: 238 EITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            + + + V+W+  I+       G EA  +F ++  +       T + +L +     +++ 
Sbjct: 480 FMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKE 539

Query: 295 GKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
           G +I  +  ++ GF   V     ++ + G+ G +  A    + +  +   S W +++  
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA 598


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 179/536 (33%), Positives = 311/536 (58%), Gaps = 6/536 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D+K+G  IH   ++ GF S +  HL+  ++  YV+ G+ ++A K+FD + E +VVSW+ +
Sbjct: 52  DLKQGCLIHSHIIRNGFDSNL--HLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQ 109

Query: 251 IAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+  A +G   +A  +F  +     + N++T  ++L +  G R L  G QI     K  F
Sbjct: 110 ISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRF 169

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  + + +AL+ ++ KCG + DAR +F+ +  +D VSWN++I GY+   F + +  MF  
Sbjct: 170 IGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYS 229

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M+   + P+ +T+ S+L+A S + +L +  Q+H  II+ GF     +   LI  Y K   
Sbjct: 230 MMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEG 289

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVNGSTFSIVLK 486
           +  +  +   + KK+ +   A+ +       ++ EAL+L++ +     E++  TF  +L 
Sbjct: 290 MKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLN 349

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            CA +  L  G+ IH LA+K +   D+   +A++DMY K G IEDA RAF ++   ++  
Sbjct: 350 VCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVIS 409

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W +++ GY +HG  HE   L+ KM   G+KP++IT+L++L +C H+GL  E     + M 
Sbjct: 410 WTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMI 469

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             + ++P+ EHY+C++DL  R G LE A   I +M I P++ +W ++L AC+IYG++ LG
Sbjct: 470 TKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLG 529

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            +A + LL + P+N + YV+L+ +YA++G W+   ++R  M+ + L K PGYS I 
Sbjct: 530 EVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPGYSIIQ 585



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 228/451 (50%), Gaps = 13/451 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S +I+NG   +  LST LI  + KF +   A +       R+++++ A ISG A+   
Sbjct: 59  IHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGH 118

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              AL +F ++   G+R + FT+ S+++AC     L+    +HG   K  F   +++ S 
Sbjct: 119 YQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSA 178

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ ++K G +  A   F    + D V++ A++ GY      D S  +F  M   G+  +
Sbjct: 179 LVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPD 238

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F+L +VL AS    ++ +  QIHG  +++GF S +   LN ++++ Y +      A  +
Sbjct: 239 CFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHI--DLNGSLIDAYAKSEGMKSASAL 296

Query: 236 FDEITEPDVVSWSERI---AAACD-GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +  + + DV+S++  +   A  C    EA  LFKD++    +I++ T   +L+       
Sbjct: 297 YKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIAS 356

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+QI A   K      V+ GNAL+ MY K G++ DA   F  +  K+ +SW S+I G
Sbjct: 357 LSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITG 416

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLL 410
           Y ++G+ ++A+ ++  M    L PN  T  S+L A S+S    +  +  +++I K   L 
Sbjct: 417 YGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILP 476

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKK 441
                SC+I  + +   L E+  ++ +++ K
Sbjct: 477 RAEHYSCMIDLFARGGQLEEAYNMICKMNIK 507



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 224/460 (48%), Gaps = 21/460 (4%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L++  ++H   ++ GF S ++L +  I  Y K GE ++A   F    + + V++TA + G
Sbjct: 53  LKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISG 112

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSG 210
           Y  NG +  +  VF +M   G+  N+F+  +VL A   ++    G QIHG   K  F+  
Sbjct: 113 YAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGN 172

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACD-GVEAFGLFKDL 267
           +   + +A+++L+ +CG   DA  +F+ ++E DVVSW+  I   AA D   ++F +F  +
Sbjct: 173 L--FVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSM 230

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                  + +T+ ++L +      L    QI     ++GF   + +  +LI  Y K   +
Sbjct: 231 MGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGM 290

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
             A +++  ++ KD +S+ +++ GY+    +  +ALD+F  M    +  +  T  ++L  
Sbjct: 291 KSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNV 350

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++  SL    Q+H+  IK     D +  + L+  Y K   + ++ R   E+ +KN +  
Sbjct: 351 CADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISW 410

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCL- 503
            +L +         EA+ LY+ +     + N  TF  +L AC  + +T    G+   C  
Sbjct: 411 TSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLT----GEGWECFN 466

Query: 504 ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICR 541
            +  +Y+     E  S +ID++ + G +E+   A+  IC+
Sbjct: 467 NMITKYNILPRAEHYSCMIDLFARGGQLEE---AYNMICK 503



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+  + KN    +  + + L+   +K  +   A R+LF+T + RD++++NA+I G A  
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDA-RYLFETMSERDVVSWNAVIGGYAAQ 217

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYL 115
             +  + ++F  +  +G+ PD FT  S++KA  S   N I    +HG+ ++LGF S + L
Sbjct: 218 DFNDDSFRMFYSMMGEGVTPDCFTLGSVLKA-SSRANNLIKVCQIHGIIIQLGFGSHIDL 276

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEMRSLG 174
               I+ YAKS  + SA   ++  L  D +++TA++ GY     + +   ++F +M+ + 
Sbjct: 277 NGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIF 336

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E+++ +   +L    D+     G QIH   +K      V     NA++++Y + G+  D
Sbjct: 337 MEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVAT--GNALVDMYAKSGEIED 394

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A + F E+ E +V+SW+  I        G EA  L+K + +   + N+ T ++LL +   
Sbjct: 395 ATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSH 454

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
             +   G +    C+           N +I+ Y                I   +  ++ M
Sbjct: 455 SGLTGEGWE----CF-----------NNMITKYN---------------ILPRAEHYSCM 484

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           I  ++  G   +A +M C M   ++ PN     +IL A S
Sbjct: 485 IDLFARGGQLEEAYNMICKM---NIKPNSSLWGAILGACS 521



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 8/244 (3%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           IL+    ++ LKQ   +HSHII++GF  +  + + LI  Y K      +++V   + ++N
Sbjct: 43  ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            V   A  S       + +AL ++  +  +    N  T+  VL+AC  +  LE+G  IH 
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
              K R+  ++FV+SA++D++ KCG +EDA+  F  +    +  WNA++ GYA      +
Sbjct: 163 CIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDD 222

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              +F  M   GV PD  T  +VL +   A         L  +  +HG+I QL  +   +
Sbjct: 223 SFRMFYSMMGEGVTPDCFTLGSVLKASSRA-------NNLIKVCQIHGIIIQLG-FGSHI 274

Query: 623 DLLG 626
           DL G
Sbjct: 275 DLNG 278



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 13/223 (5%)

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           + VL++  + N +    L     ++ C  E   L           + S +  +L+ C   
Sbjct: 2   RGVLTKKFRYNLLQFTFLKQRFHHSPCEPELTHL-----------SSSLYMKILQLCIET 50

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
            DL+QG  IH   ++  +D ++ + + +I  Y K G   +A++ F ++   ++  W A +
Sbjct: 51  EDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQI 110

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GYA++G Y +   +F++M + GV+ ++ TY +VL +C     +        C+   +  
Sbjct: 111 SGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQK-NRF 169

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           I  L   + +VDL  + G +E A+   + M    D   W +++
Sbjct: 170 IGNLFVQSALVDLHSKCGNMEDARYLFETMS-ERDVVSWNAVI 211


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 220/739 (29%), Positives = 369/739 (49%), Gaps = 28/739 (3%)

Query: 24  HFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL--RPDA 81
            F  F   +   + L  +    I + N  +    R   S  AL LF +    G     D 
Sbjct: 21  QFKYFHSSKHVHQPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQ 80

Query: 82  FTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
            T + ++KAC G  +    +H   +  GF S V + +  +  Y K+G    A + F +  
Sbjct: 81  VTVAIVLKACCGDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLN 140

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQ 197
           + D V++  ++ G+  +   D +    + M   G+  +  + T VL    D +    G Q
Sbjct: 141 NPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQ 197

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
           +H   +K G    V   + NA++ +Y RC + ++A ++FDE+   D+VSW+  ++     
Sbjct: 198 LHSRILKCGLDCEV--FVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQE 255

Query: 257 ---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
              G+EA  +F ++     +++  +    +S+ G  +    G+QI +   K+G+   V +
Sbjct: 256 GNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKV 315

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N LIS Y KC  + DA+ +F+ +I ++ VSW +MI+   E+     A  +F  M    +
Sbjct: 316 CNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGV 370

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            PN  T   ++ A++    +++   +H   +K+ FL + ++ + LIT Y K  ++++S +
Sbjct: 371 YPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMK 430

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK--ACAAM 491
           V  E++ +  +  N+L S         EAL+ + +     R  N  TF  VL   A A  
Sbjct: 431 VFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRP-NEFTFGSVLSSIASAEA 489

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             +  G+  H   LK   + +  V SA++DMY K G+I ++   F +    +   W A++
Sbjct: 490 ISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAII 549

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
             +A+HG Y  V NLF  M + GVKPD IT+LAV+T+C   G+V       + M   H +
Sbjct: 550 SAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLI 609

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P  EHY+ +VD+LGR G L+ A+  + Q+P      + QSLL AC I+GN+D+      
Sbjct: 610 EPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVAD 669

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG-----Y 726
            L+E++P    +YVL+SNLYA  G W  V K+RK M+E+ + KE G+SW+ VG      Y
Sbjct: 670 DLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLY 729

Query: 727 THHFYAGDSSHSQSKEIYK 745
            H F + D  H QS+EIY+
Sbjct: 730 LHGFSSDDKFHPQSEEIYR 748



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 281/549 (51%), Gaps = 30/549 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  I +G      +  +L++ + K   F RA     +  N DI+++N ++SG  R  
Sbjct: 99  QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR-- 156

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLV 116
            S  AL    R+ + G+  DA T ++++  C S  E  I    +H   LK G    V++ 
Sbjct: 157 -SDDALNFALRMNFTGVAFDAVTCTTVLAFC-SDHEGFIFGFQLHSRILKCGLDCEVFVG 214

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGL 175
           +  I  Y++   +V A   F +  + D V++ AM+ GY   G    ++  VF+EM   G+
Sbjct: 215 NALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGM 274

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +L+  S T  + A    KE   G QIH   VK+G+ + V   + N +++ Y +C    DA
Sbjct: 275 KLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHV--KVCNVLISTYSKCEDIEDA 332

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
             +F+ I + +VVSW+  I+ + +  +A  LF ++R +    N+ T + L+ ++  + ++
Sbjct: 333 KLVFESIIDRNVVSWTTMISISEE--DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLV 390

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+ I   C K  F+  +++ N+LI+MY K   ++D+  +F+ L +++ +SWNS+I+GY
Sbjct: 391 EEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGY 450

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKSGFLL 410
           ++NG + +AL  F   L  S  PN +T  S+L ++++++  S++   + HSHI+K G   
Sbjct: 451 AQNGLWQEALQTFLSALMESR-PNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNT 509

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + S L+  Y K  ++ ES  V SE   KN V   A+ S       +   + L++ + 
Sbjct: 510 NPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDME 569

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDMYC 524
               + +  TF  V+ AC     ++ G  +    +K     D  +E      S+++DM  
Sbjct: 570 REGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVK-----DHLIEPSPEHYSSMVDMLG 624

Query: 525 KCGTIEDAK 533
           + G +++A+
Sbjct: 625 RAGRLKEAE 633



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 237/451 (52%), Gaps = 21/451 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S ++K G   +  +   LI+ +++      A R   + +N+D++++NA++SG A+  
Sbjct: 197 QLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEG 256

Query: 61  QSG-PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            SG  A+ +F  +  +G++ D  +F+  + ACG  +E E+   +H + +K+G+ + V + 
Sbjct: 257 NSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVC 316

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y+K  +I  A++ F   +D + V++T M+     +   + +  +F EMR  G+ 
Sbjct: 317 NVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMI-----SISEEDATSLFNEMRRDGVY 371

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N+ +   ++ A      V+EG+ IHG  VK  FLS +  +++N+++ +Y +     D++
Sbjct: 372 PNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSEL--NVSNSLITMYAKFESMSDSM 429

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG-GE 289
           K+F+E+   +++SW+  I+  A +G+  EA   F      + + NE+T  ++LSS+   E
Sbjct: 430 KVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSA-LMESRPNEFTFGSVLSSIASAE 488

Query: 290 RI-LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            I +R G++  +   K+G      + +AL+ MY K G + ++  +F     K+ V+W ++
Sbjct: 489 AISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAI 548

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ ++ +G +   +++F  M    + P+  T  +++ A      +    Q+ + ++K   
Sbjct: 549 ISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHL 608

Query: 409 L-LDDSMISCLITTYGKCNALNESKRVLSEI 438
           +       S ++   G+   L E++  + +I
Sbjct: 609 IEPSPEHYSSMVDMLGRAGRLKEAEEFVGQI 639


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 200/644 (31%), Positives = 335/644 (52%), Gaps = 17/644 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLEL- 177
           I  + K+G++ SA   F    D   V +T ++  Y  N  FD++ ++F +M RS    L 
Sbjct: 86  ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AV 233
           +  + T +L    D        Q+H F VK+GF +     ++N ++  Y    ++LD A 
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV-RRLDLAC 204

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+EI E D V+++  I     DG+  E+  LF  +R +  Q +++T   +L +V G  
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G+Q+ A     GF    S+GN ++  Y K  +V + R +FD +   D VS+N +I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            YS+   +  +L  F  M         +  A++L   +N  SL+   Q+H   +      
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---LAT 381

Query: 411 DDSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            DS++   + L+  Y KC    E++ +   + ++  V   AL S  V    H   L+L+ 
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            + GS    + STF+ VLKA A+   L  GK +H   +++   +++F  S ++DMY KCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           +I+DA + F ++   +   WNA++  +A +G        F KM + G++PD ++ L VLT
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H G V +   Y   MS ++G+ P+ +HYAC++DLLGR G    A+  +D+MP  PD 
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKE 706
            +W S+L+AC I+ N  L   A  KL  ++   + + YV +SN+YA+AG W  V  ++K 
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKA 681

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           M+E+ + K P YSW+ V    H F + D +H    EI +++ +L
Sbjct: 682 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 277/592 (46%), Gaps = 50/592 (8%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFD 70
           H + + + T+IS   K  D   A R LFD   +R ++T+  L+   AR      A KLF 
Sbjct: 76  HKNTVSTNTMISGHVKTGDVSSA-RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134

Query: 71  RLRYQG--LRPDAFTFSSLVKACG-SLQENEI--VHGVCLKLGFSSRVYLVSG--FIENY 123
           ++        PD  TF++L+  C  ++ +N +  VH   +KLGF +  +L      +++Y
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            +   +  A + F +  + D+V +  ++ GY  +G + +S  +F++MR  G + ++F+ +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254

Query: 184 AVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            VL A     D   G+Q+H   V  GF       + N I++ Y +  + L+   +FDE+ 
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDAS--VGNQILDFYSKHDRVLETRMLFDEMP 312

Query: 241 EPDVVSWSERIA--AACDGVEA-FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           E D VS++  I+  +  D  EA    F++++   F    +    +LS       L+ G+Q
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +           ++ +GN+L+ MY KC    +A  IF  L  + +VSW ++I+GY + G 
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
               L +F  M   +L  +  T A++L+A ++  SL    Q+H+ II+SG L +    S 
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L+  Y KC ++ ++ +V  E+  +NAV  NAL S          A+  +  +  S  + +
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             +   VL AC+    +EQG           Y Q      A+  +Y     I   K+ + 
Sbjct: 553 SVSILGVLTACSHCGFVEQG---------TEYFQ------AMSPIY----GITPKKKHY- 592

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             C   L G N         G + E   L ++M     +PDEI + +VL +C
Sbjct: 593 -ACMLDLLGRN---------GRFAEAEKLMDEMP---FEPDEIMWSSVLNAC 631



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 221/452 (48%), Gaps = 18/452 (3%)

Query: 1   QIYSLLIKNGHHLDPIL--STTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q+++  +K G   +P L  S  L+  + +      A     +   +D +T+N LI+G  +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
                 ++ LF ++R  G +P  FTFS ++KA   L +    + +H + +  GFS    +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  ++ Y+K   ++   M F +  +LD V+Y  ++  Y    +++ S   F EM+ +G 
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +   F    +L  + ++     G Q+H   +     S +  H+ N+++++Y +C    +A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL--HVGNSLVDMYAKCEMFEEA 405

Query: 233 VKMFDEITEPDVVSWSERIAAACD-GVEAFG--LFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F  + +   VSW+  I+     G+   G  LF  +R ++ + ++ T   +L +    
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GKQ+ AF  + G +E V  G+ L+ MY KCG + DA  +F+ +  +++VSWN++I
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA---MQVHSHIIKS 406
           + +++NG    A+  F  M+E  L P+  ++  +L A S+   ++Q     Q  S I   
Sbjct: 526 SAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY-- 583

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           G        +C++   G+     E+++++ E+
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 170/361 (47%), Gaps = 15/361 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q+++L +  G   D  +   ++  ++K  D     R LFD     D ++YN +IS  ++ 
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKH-DRVLETRMLFDEMPELDFVSYNVVISSYSQA 329

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
            Q   +L  F  ++  G     F F++++       SLQ    +H   L     S +++ 
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ YAK      AE+ F+       V++TA++ GYV  G      ++F +MR   L 
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ +   VL AS        G+Q+H F ++ G L  V +   + ++++Y +CG   DAV
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS--GSGLVDMYAKCGSIKDAV 507

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+E+ + + VSW+  I+A     DG  A G F  +  +  Q +  +++ +L++     
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
            +  G +  QA     G          ++ + G+ G+  +A  + D + F+ D + W+S+
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627

Query: 349 I 349
           +
Sbjct: 628 L 628



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 164/363 (45%), Gaps = 6/363 (1%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-- 372
           N +IS + K G V+ AR +FD +  +  V+W  ++  Y+ N  F++A  +F  M   S  
Sbjct: 83  NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD--SMISCLITTYGKCNALNE 430
            +P+  T  ++L   +++       QVH+  +K GF  +   ++ + L+ +Y +   L+ 
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +  +  EI +K++V  N L +       + E++ L+  +  S  + +  TFS VLKA   
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           + D   G+ +H L++   + +D  V + ++D Y K   + + +  F ++       +N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           +  Y+Q   Y    + F +M   G       +  +L+   +   ++  R  L C + L  
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHCQALLAT 381

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
               L     +VD+  +  + E A++    +P       W +L+S     G    GL   
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISGYVQKGLHGAGLKLF 440

Query: 671 SKL 673
           +K+
Sbjct: 441 TKM 443


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 217/762 (28%), Positives = 387/762 (50%), Gaps = 20/762 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           Q+++ L+  G H DP+ ST L+  + +      + R +F+T  + D   +  LI      
Sbjct: 19  QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSS-RLVFETHPSPDSFMFGVLIKCYLWH 77

Query: 60  CQSGPALKLFDRLRYQGLRPD---AFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRV 113
                 + L+     +G R      F + S++KA    G L     VHG  +K G  +  
Sbjct: 78  HLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDH 137

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + +  +  Y + G +  A   F +    D V+++++V  YV NG   +  E+   M S 
Sbjct: 138 VIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSE 197

Query: 174 GLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+  +  ++ +V  A   V   +  + +HG+ ++          L N+++ +Y +C    
Sbjct: 198 GVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDA--SLRNSLIVMYGQCSYLR 255

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A  MF+ +++P    W+  I++        EA   FK ++ ++ ++N  TMI++L    
Sbjct: 256 GAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCA 315

Query: 288 GERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               L+ GK +  F  +       + +G AL+  Y  C +++    +   +     VSWN
Sbjct: 316 RLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWN 375

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++I+ Y+  G   +A+ +F  MLE  L+P+ +++AS + A + + S++   Q+H H+ K 
Sbjct: 376 TLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKR 435

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  D+ + + L+  Y KC  ++ +  +  +I +K+ V  N +           EAL+L+
Sbjct: 436 GFA-DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLF 494

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             +  +C ++N  TF   ++AC+    L +GK IH   + +   +D+++++A++DMY KC
Sbjct: 495 DEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKC 554

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G ++ A+  F  +   S+  W+AM+  Y  HG     + LF KM +  +KP+E+T++ +L
Sbjct: 555 GDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNIL 614

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C HAG V E + Y + M D +G++P  EH+A IVDLL R G ++GA   I       D
Sbjct: 615 SACRHAGSVEEGKFYFNSMRD-YGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHID 673

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
           A IW +LL+ C I+G +DL      +L E++ ++   Y LLSN+YA  G W +  K+R  
Sbjct: 674 ASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSR 733

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS-QSKEIYKEL 747
           M+   L K PGYS I +    + F AGD+S + Q  EIY+ L
Sbjct: 734 MEGMGLKKVPGYSSIEIDDKIYRFGAGDTSSAWQMDEIYRFL 775



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 293/616 (47%), Gaps = 22/616 (3%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           +  L ++C +L+    +H   +  G  S     +  +E+YA+ G + S+ + F      D
Sbjct: 4   YMPLFRSCSTLRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPD 63

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE---FSLTAVLGASFDVKE---GEQ 197
           +  +  ++  Y+W+  FD+   ++      G  L +   F   +V+ A   V     G +
Sbjct: 64  SFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRK 123

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           +HG  VK G   G  + +  +++ +Y   G   DA K+FDEI   D+VSWS  +A   + 
Sbjct: 124 VHGRIVKTGL--GTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVEN 181

Query: 258 ---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               E   + + +       +  TM+++  + G    LR  K +  +  +       S+ 
Sbjct: 182 GRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLR 241

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+LI MYG+C  +  A+ +F+ +    +  W SMI+  ++NG F +A+D F  M E  + 
Sbjct: 242 NSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVE 301

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIK---SGFLLDDSMISCLITTYGKCNALNES 431
            N  TM S+L   +    LK+   VH  I++    G  LD  +   L+  Y  C  ++  
Sbjct: 302 VNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLD--LGPALMDFYAACWKISSC 359

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           +++L  I   + V  N L S+      + EA+ L+  +       +  + +  + ACA  
Sbjct: 360 EKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGA 419

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           + +  G+ IH    K  +  D FV+++++DMY KCG ++ A   F KI   S+  WN M+
Sbjct: 420 SSVRFGQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMI 478

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G++Q+G   E   LF++M    +  +E+T+L+ + +C ++G + + + ++     + G+
Sbjct: 479 CGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGK-WIHHKLVVSGV 537

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
              L     +VD+  + G L+ A+   + MP       W ++++A  I+G I       +
Sbjct: 538 QKDLYIDTALVDMYAKCGDLKTAQGVFNSMP-EKSVVSWSAMIAAYGIHGQITAATTLFT 596

Query: 672 KLLE--LQPDNESTYV 685
           K++E  ++P NE T++
Sbjct: 597 KMVESHIKP-NEVTFM 611


>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
 gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
          Length = 841

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 209/706 (29%), Positives = 349/706 (49%), Gaps = 26/706 (3%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
           A +   +  +R+++++ A++S   R        + F  +   G  P+ F+ ++++ AC S
Sbjct: 41  ALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLATMLTACHS 100

Query: 94  L---QENEIV-----HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           +     N+++     HGV ++ G  S  ++ S  +  YAK G I +A+  F    + D  
Sbjct: 101 MVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLT 160

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS-LTAVLGASFDVKEG--EQIHGFG 202
            + AM+ GYV NG    +    + M   GL  + ++ ++AV   S   + G   Q+H   
Sbjct: 161 CWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLV 220

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVE 259
           +     S     + N+++++Y R  QK  A  +F +I + D VSW+   +      D   
Sbjct: 221 IHSMLESNTS--VMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKA 278

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
            FG   D+    F+ NE T   LL   G +     G QI A  Y+ G+ + V + NA+I+
Sbjct: 279 VFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVIN 338

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           M  +CG ++ A   F  L F++ V+WN +IAGY        A+ +F  ++     P+ +T
Sbjct: 339 MLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFT 398

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGF----LLDDSMISCLITTYGKCNALNESKRVL 435
            +++L A   +   +   Q+H+ I+K GF     +  S+I      +G   ++  S +++
Sbjct: 399 YSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFG---SVQSSLKII 455

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTDL 494
            +  K   V   A+ S  +    + E + L+    G S  + +    + VL ACA    +
Sbjct: 456 EDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALI 515

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMM 552
              + IH L LK  +     V SAV+D Y KCG I  A+ AF  +    +    +N M+ 
Sbjct: 516 RHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLT 575

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            YA HG  HE  NL+ +M+K  + P   T++A+L++C H GLV + +   S M   +G+ 
Sbjct: 576 AYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMH 635

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P   +YAC+VDLL R GLL+ AK  ID MP  P   +W+SL++ C I+GN  LG+LA  +
Sbjct: 636 PARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQ 695

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           +L + P ++  YV LSN+YA  G W    + R+ M +  L K  GY
Sbjct: 696 ILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNNLQKVHGY 741



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/575 (22%), Positives = 255/575 (44%), Gaps = 23/575 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ + ++ G   +P + ++L+  + K      A R     +N+D+  +NA++ G      
Sbjct: 115 LHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGF 174

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              A+     + + GL PD +T+ S VKAC    +      +H + +     S   +++ 
Sbjct: 175 GHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNS 234

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGL 175
            ++ Y ++ +  +A   FR     D V++  M  G+  +   +  K VF   ++M   G 
Sbjct: 235 LVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHD---EDDKAVFGYLIDMSRTGF 291

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NE + + +L   GA  +   G QI     + G+   V   + NA++N+  RCG    A
Sbjct: 292 KPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL--VANAVINMLFRCGLLDRA 349

Query: 233 VKMFDEITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F  +T  ++V+W+E IA         +A  LF+ L     + +E+T   +LS+    
Sbjct: 350 YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEA 409

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWNSM 348
              R  +QI A   K GF     +  +LI       G V  +  I +     + VSW ++
Sbjct: 410 HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAI 469

Query: 349 IAGYSENGFFNQALDMF-CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           I+ + ++G  ++ + +F     + +  P+ + +A++L A +N+  ++    +HS ++K+G
Sbjct: 470 ISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG 529

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALEL 465
                 + S ++  Y KC  +  ++   + +     +A+  N + +         EAL L
Sbjct: 530 HSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNL 589

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYC 524
           Y  +  +      +TF  +L AC+ +  +EQGK      L A          A ++D+  
Sbjct: 590 YEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLA 649

Query: 525 KCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           + G +++AK     +  +   A W +++ G   HG
Sbjct: 650 RKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHG 684



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 134/605 (22%), Positives = 244/605 (40%), Gaps = 31/605 (5%)

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           KLG  +  + ++     YA+ G + SA   F +    + V++TAMV     NG       
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 166 VFVEMRSLGLELNEFSLTAVLGA--------SFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
            FV M   G   NEFSL  +L A        S  +     +HG  V+ G  S     + +
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSN--PFVGS 132

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQI 274
           +++ +Y + G+   A + F  I   D+  W+  +        G  A      +  +    
Sbjct: 133 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAP 192

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + YT I+ + +         G+Q+             S+ N+L+ MY +  Q   A S+F
Sbjct: 193 DRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVF 252

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +  KD+VSWN+M +G++ +            M      PN  T + +L      ++  
Sbjct: 253 RKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENAS 312

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +Q+ +   + G+  +  + + +I    +C  L+ +      +  +N V  N + +   
Sbjct: 313 LGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYG 372

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
             S   +A+ L+R++       +  T+S VL A          + IH + LK  +    F
Sbjct: 373 LFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQF 432

Query: 515 VESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           V +++I       G+++ + +      +  L  W A++  + +HG   EV  LFN     
Sbjct: 433 VSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGD 492

Query: 574 GV-KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLG 626
              KPDE     VL +C +A L+R  R        +H L+ +  H       + +VD   
Sbjct: 493 STNKPDEFILATVLNACANAALIRHCRC-------IHSLVLKTGHSNHFCVASAVVDAYA 545

Query: 627 RVGLLEGAKMTIDQM-PIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNEST 683
           + G +  A+     +     DA ++ ++L+A   +G I   L L       +L P   + 
Sbjct: 546 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 605

Query: 684 YVLLS 688
             +LS
Sbjct: 606 VAILS 610



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 175/366 (47%), Gaps = 17/366 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L  ++G+  + +++  +I+   +     RA+ F      R+I+T+N +I+G   F 
Sbjct: 316 QIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFS 375

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A++LF  L   G RPD FT+S+++ A       +++E +H + LK GF+S  ++ +
Sbjct: 376 HSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVST 435

Query: 118 GFIE-NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
             I+ N A  G + S+     D   ++ V++ A++  ++ +G  D+   +F   R     
Sbjct: 436 SLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTN 495

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +EF L  VL A  +   ++    IH   +K G  +  C  + +A+++ Y +CG+   A
Sbjct: 496 KPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFC--VASAVVDAYAKCGEITSA 553

Query: 233 VKMFDEITEP--DVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
              F  ++    D + ++  + A A  G+  EA  L++++          T + +LS+  
Sbjct: 554 ESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACS 613

Query: 288 GERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSW 345
              ++  GK          G     +    L+ +  + G +++A+ + D + F+     W
Sbjct: 614 HLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVW 673

Query: 346 NSMIAG 351
            S++ G
Sbjct: 674 RSLVNG 679


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 201/593 (33%), Positives = 304/593 (51%), Gaps = 22/593 (3%)

Query: 171 RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           RS+  +L    +TA     F      Q  GF  +    +G           L  R     
Sbjct: 52  RSVSRDLPNVQITAQHFLIFPEHTAFQFSGFSKRRSICAGAV---------LRRRYSNNP 102

Query: 231 DAVKMFDE-ITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           +   +F++ + + +V SW+  IA    + D VEA   F  +R    + N  T    + S 
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L +G+Q        GF   + + +AL+ MY KCG++ DAR++FD +  ++ VSW 
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222

Query: 347 SMIAGYSENGFFNQALDMFCHML--------EFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           SMI GY +N   ++AL +F   L        +  +  +   M S+L A S          
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           VH  +IK GF  D  + + L+  Y KC  L  S+RV   + +++ +  N++ +V      
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342

Query: 459 HAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
             E++E++ R +       N  T S VL ACA       GK IH   +K   + ++FV +
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           ++IDMYCKCG +E A++AF ++   ++  W+AM+ GY  HG   E   +F +M+  GVKP
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           + IT+++VL +C HAGL+ E   +   MS    + P +EHY C+VDLLGR G L+ A   
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDL 522

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           I  M + PD  +W +LL AC ++ N+DLG ++  KL EL P N   YVLLSN+YA AG W
Sbjct: 523 IKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRW 582

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            DV ++R  MK   L K PG+S + + G  H F  GD  H Q ++IY+ L KL
Sbjct: 583 EDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKL 635



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 205/410 (50%), Gaps = 29/410 (7%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVH 101
           ++ ++N++I+ LAR   S  AL+ F  +R   L+P+  TF   +K+C +L         H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
              L  GF   +++ S  ++ Y+K GE+  A   F +    + V++T+M+ GYV N +  
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235

Query: 162 KSKEVFVE--MRSLGLE------LNEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSG 210
           ++  +F E  +   G E      ++  ++ +VL A   V E    E +HGF +K GF   
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF-KD 266
           +   + N +M+ Y +CG+   + ++FD + E DV+SW+  IA  A +G+  E+  +F + 
Sbjct: 296 LG--VENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRM 353

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           ++  +   N  T+  +L +       R GK I     K+G    V +G ++I MY KCG+
Sbjct: 354 VKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGK 413

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           V  AR  FD +  K+  SW++M+AGY  +G   +AL++F  M    + PN  T  S+L A
Sbjct: 414 VEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAA 473

Query: 387 VSNSKSLKQAMQ-----VHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            S++  L++         H   ++ G         C++   G+   L E+
Sbjct: 474 CSHAGLLEEGWHWFKAMSHEFDVEPGV----EHYGCMVDLLGRAGYLKEA 519



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 170/363 (46%), Gaps = 24/363 (6%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKL 68
           G   D  +S+ L+  ++K  + R A R LFD   +R+I+++ ++I+G  +   +  AL L
Sbjct: 182 GFEPDLFVSSALVDMYSKCGELRDA-RTLFDEISHRNIVSWTSMITGYVQNDDAHRALLL 240

Query: 69  FDRLRYQG--------LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           F     +         +  D     S++ AC  + E  I   VHG  +K GF   + + +
Sbjct: 241 FKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVEN 300

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LE 176
             ++ YAK GE+  +   F    + D +++ +++  Y  NG   +S E+F  M   G + 
Sbjct: 301 TLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 360

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +L+AVL A   S   + G+ IH   +K+G  S V   +  +I+++Y +CG+   A 
Sbjct: 361 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV--FVGTSIIDMYCKCGKVEMAR 418

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K FD + E +V SWS  +A         EA  +F ++     + N  T +++L++     
Sbjct: 419 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 478

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           +L  G    +A  ++      V     ++ + G+ G + +A  +   +  + D V W ++
Sbjct: 479 LLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGAL 538

Query: 349 IAG 351
           +  
Sbjct: 539 LGA 541



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 126/265 (47%), Gaps = 19/265 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  LIK G   D  +  TL+  + K  +   + R       RD+I++N++I+  A+   
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342

Query: 62  SGPALKLFDRLRYQG-LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           S  ++++F R+   G +  +A T S+++ AC   GS +  + +H   +K+G  S V++ +
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G++  A   F    + +  +++AMV GY  +G   ++ EVF EM   G++ 
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462

Query: 178 NEFSLTAVLGASFD---VKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           N  +  +VL A      ++EG        H F V+ G     C      +++L  R G  
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC------MVDLLGRAGYL 516

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A  +   +   PD V W   + A
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGA 541


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 207/735 (28%), Positives = 379/735 (51%), Gaps = 28/735 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+Y    K+G   +  + T ++    K    R A R   D      + +NA +SG  R  
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           + G A+++F  + +    P++FT+S  + AC + +E  +   VHG+ L+      V++ +
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G++ +A   F      + V++T  + G+V + E   +  +  EM   G+ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N+++ T++L A      V+E  QIHG  +K   +L  V   +  A+++ Y   G    + 
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCV---VKEALISTYTNFGFIELSE 326

Query: 234 KMFDEI-TEPDVVSWSERIAAACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+F+E  T  +   WS  I+   +   + +  L + +     + N+    ++ SSV    
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS-- 384

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  G Q+ +   K GF+  + +G+AL +MY +C  V D+  +F+ +  +D VSW +M+A
Sbjct: 385 -IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVA 443

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK----S 406
           G++ +G   +A   F +M+     P+  ++ +IL A +  + L +  +VH H ++    +
Sbjct: 444 GFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGET 503

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            F+ D     C I+ Y KC  +  ++R+     +K+ V  +++ S      C  EA+ L+
Sbjct: 504 TFIND-----CFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLF 558

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           + +  +   ++    S +L  CA +      K +H  A+KA    D  V S+++ +Y + 
Sbjct: 559 QLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G ++D+++ F +I    L  W  ++ GYAQHG       +F+ M + GV+PD +  ++VL
Sbjct: 619 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 678

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C   GLV +   Y + M   +G+ P+L+HY C+VDLLGR G L  AK  +D MP+ PD
Sbjct: 679 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 738

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             +W +LL+AC ++ +  LG    +K+ E   D+ S +  LSN+ A++G W +V ++RK 
Sbjct: 739 LMVWSTLLAACRVHDDTVLGRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKT 797

Query: 707 MKEKFLCKEPGYSWI 721
           MK   + KEPG+S +
Sbjct: 798 MKG--VNKEPGWSMV 810



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 155/610 (25%), Positives = 273/610 (44%), Gaps = 33/610 (5%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           E V+    K G S   Y+ +G ++  AKSG +  A   F D      V + A V G V N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH 214
           GE   + E+F +M     E N F+ +  L A    +E   G  +HG  ++      V   
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDV--F 206

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND 271
           +  +++N+Y +CG    A++ F  +   +VVSW+  IA      + V A  L +++  N 
Sbjct: 207 VGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNG 266

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             IN+YT  ++L +     ++R   QI     K        +  ALIS Y   G +  + 
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326

Query: 332 SIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            +F+      +   W++ I+G S +    +++ +   M    L PN    AS+  +V+  
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVN-- 383

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            S++   Q+HS  IK GF+    + S L T Y +C+ + +S +V  E+ +++ V   A+ 
Sbjct: 384 -SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 442

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +         EA   +R +     + +  + + +L AC     L +GK +H   L+  Y 
Sbjct: 443 AGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YG 501

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           +  F+    I MY KC  ++ A+R F    R     W++M+ GYA +GC  E  +LF  M
Sbjct: 502 ETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLM 561

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVDL 624
               ++ D     ++L+ C        AR +      LH      G++      + +V +
Sbjct: 562 VAASIRIDSYICSSILSLCADI-----ARPFYC--KPLHGYAIKAGILSDQSVSSSLVKV 614

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL--QPDNES 682
             R G ++ ++   D++ + PD   W +++     +G+    L     +++L  +PD   
Sbjct: 615 YSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPD--- 670

Query: 683 TYVLLSNLYA 692
           T VL+S L A
Sbjct: 671 TVVLVSVLSA 680


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 218/721 (30%), Positives = 375/721 (52%), Gaps = 31/721 (4%)

Query: 54  SGLARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKL 107
           S L + C SG    ALK    ++   +  +   F +L++ C + +   E E V     K 
Sbjct: 3   SRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYV----WKA 58

Query: 108 GFSSRVYLVSGFIEN-----YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
             SS V L+S  + N     + + G++ +A   F    + D  ++  +V GY   G FD+
Sbjct: 59  VLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDE 118

Query: 163 SKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI 219
           +  ++  +   G+  + ++  +VL     + D+  G ++H   V+  F   V   + NA+
Sbjct: 119 ALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDV--DVVNAL 176

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQ 273
           + +YV+CG  + A  +FD++   D +SW+  I+         +G+E F   ++L  +   
Sbjct: 177 ITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDL 236

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +   ++I+    +G ER+   G Q+ ++  +  +   +S+ N+LI MY   G   +A S+
Sbjct: 237 MTMTSVISACELLGDERL---GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESV 293

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  +D VSW ++I+G  +N   ++AL+ +  M     +P+  T+AS+L A ++   L
Sbjct: 294 FSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQL 353

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
              M++H    ++G +L   + + LI  Y KC  + ++  +  +I  K+ +   ++ + L
Sbjct: 354 DMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGL 413

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
              +   EAL  +R +    +  N  T    L ACA +  L  GK IH  ALKA    D 
Sbjct: 414 RINNRCFEALIFFRKMILKSKP-NSVTLISALSACARVGALMCGKEIHAHALKAGMGFDG 472

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           F+ +A++D+Y +CG +  A   F    +D +  WN ++ GYAQ G    V  LF +M + 
Sbjct: 473 FLPNAILDLYVRCGRMRTALNQFNLNEKD-VGAWNILLTGYAQKGKGAMVMELFKRMVES 531

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            + PD++T++++L +C  +G+V E   Y   M   + + P L+HYAC+VDLLGR G L  
Sbjct: 532 EINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNE 591

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           A   I++MPI PD  IW +LL+AC I+ ++ LG LA   + +   ++   Y+LL NLYA 
Sbjct: 592 AHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYAD 651

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
           +G W++V K+R+ MKE+ L  +PG SW+ V G  H F +GD+ H Q +EI   L   YE 
Sbjct: 652 SGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEK 711

Query: 754 M 754
           M
Sbjct: 712 M 712



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/546 (25%), Positives = 259/546 (47%), Gaps = 15/546 (2%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   L+S F +F D   A+        RD+ ++N L+ G  +      AL L+ R+ + G
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 77  LRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +RPD +TF S++++C     L     VH   ++  F   V +V+  I  Y K G++VSA 
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---F 190
           M F      D +++ AM+ GY  N E  +  E+F  MR L ++ +  ++T+V+ A     
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D + G Q+H + V+  +   +  +  N+++ +Y+  G   +A  +F  +   DVVSW+  
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVY--NSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308

Query: 251 IAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+   D +   +A   +K +       +E T+ ++LS+      L  G ++     + G 
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  V + N+LI MY KC ++  A  IF  +  KD +SW S+I G   N    +AL  F  
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M+  S  PN  T+ S L A +   +L    ++H+H +K+G   D  + + ++  Y +C  
Sbjct: 429 MILKSK-PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGR 487

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  +    + +++K+    N L +        A  +EL++ +  S    +  TF  +L A
Sbjct: 488 MRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546

Query: 488 CAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLA 545
           C+    + +G +    + +      ++   + V+D+  + G + +A     ++  +   A
Sbjct: 547 CSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPA 606

Query: 546 GWNAMM 551
            W A++
Sbjct: 607 IWGALL 612



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 221/459 (48%), Gaps = 30/459 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++++ +++    +D  +   LI+ + K  D   A R LFD    RD I++NA+ISG    
Sbjct: 156 EVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSA-RMLFDKMPTRDRISWNAMISGYFEN 214

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +    L+LF R+R   + PD  T +S++ AC  L +  +   +H   ++  +   + + 
Sbjct: 215 DECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVY 274

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y   G    AE  F      D V++T ++ G V N   DK+ E +  M   G  
Sbjct: 275 NSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTM 334

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +E ++ +VL A   + +   G ++H    + G +  V   + N+++++Y +C +   A+
Sbjct: 335 PDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVV--VANSLIDMYSKCKRIEKAL 392

Query: 234 KMFDEITEPDVVSWSE-----RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           ++F +I + DV+SW+      RI   C   EA   F+ +     + N  T+I+ LS+   
Sbjct: 393 EIFHQIPDKDVISWTSVINGLRINNRC--FEALIFFRKMILKS-KPNSVTLISALSACAR 449

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK+I A   K G      + NA++ +Y +CG++  A + F+ L  KD  +WN +
Sbjct: 450 VGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNIL 508

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK------QAMQVHSH 402
           + GY++ G     +++F  M+E  + P+  T  S+L A S S  +       Q M+V+ H
Sbjct: 509 LTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYH 568

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           I       +    +C++   G+   LNE+   +  +  K
Sbjct: 569 ITP-----NLKHYACVVDLLGRAGKLNEAHEFIERMPIK 602


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 184/583 (31%), Positives = 324/583 (55%), Gaps = 14/583 (2%)

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           + F+   +L A+       Q+H   +++G L G     + A+++ Y+R G+  DA + FD
Sbjct: 70  DAFTFPPLLRAAQGPGTAAQLHACALRLGLLRGDA-FASGALVHAYLRFGRVRDAYRAFD 128

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS--SVGGERIL 292
           E+   DV +W+  ++  C      EA GLF  +       +  T+ ++L    + G+R L
Sbjct: 129 EMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRAL 188

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
                +  +  K G  + + + NA+I +YGK G + + R +FD +  +D V+WNS+I+G+
Sbjct: 189 ALAMHL--YAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            + G    A++MFC M +  + P+  T+ S+  A++    +     VH ++++ G+ + D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 413 SMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            +  + ++  Y K + +  ++R+   +  ++AV  N L +  +     +EA+ +Y  +  
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 472 --SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
               + + G TF  VL A + +  L+QG  +H L++K   + D++V + VID+Y KCG +
Sbjct: 367 HEGLKPIQG-TFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           ++A   F +  R S   WNA++ G   HG   +  +LF++M + G+ PD +T++++L +C
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGLV + R + + M   +G+ P  +HYAC+VD+ GR G L+ A   I  MPI PD+ I
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC I+GN+++G +A   L EL P N   YVL+SN+YA  G W+ V ++R  ++ 
Sbjct: 546 WGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSS--HSQSKEIYKELIKL 750
           + L K PG+S I V    + FY+G+    H Q +EI +EL+ L
Sbjct: 606 QNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDL 648



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 252/522 (48%), Gaps = 19/522 (3%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG-FIENYAKSGEIVSAEMCFRD 138
           DAFTF  L++A         +H   L+LG        SG  +  Y + G +  A   F +
Sbjct: 70  DAFTFPPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDE 129

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEG 195
               D  A+ AM+ G   N    ++  +F  M   G+  +  ++++VL       D    
Sbjct: 130 MRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALA 189

Query: 196 EQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
             +H + VK G      VC    NA++++Y + G   +  K+FD ++  D+V+W+  I+ 
Sbjct: 190 LAMHLYAVKHGLDDELFVC----NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF-ME 309
              G     A  +F  +R +    +  T+++L S++     +  G+ +  +  + G+ + 
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            +  GNA++ MY K  ++  A+ +FD +  +D+VSWN++I GY +NG  ++A+ ++ HM 
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 370 EF-SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +   L P   T  S+L A S+  +L+Q  ++H+  IK+G  LD  + +C+I  Y KC  L
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           +E+  +  +  +++    NA+ S +      A+AL L+  +       +  TF  +L AC
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYCKCGTIEDAKRAFRKI-CRDSLAG 546
           +    ++QG+    +   A   + I    A ++DM+ + G ++DA    R +  +   A 
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           W A++     HG   E+  + ++ + F + P  + Y  ++++
Sbjct: 546 WGALLGACRIHGNV-EMGKVASQ-NLFELDPKNVGYYVLMSN 585



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 207/429 (48%), Gaps = 12/429 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D   S  L+  + +F   R A+R   + ++RD+  +NA++SGL R  ++  A+ LF R+ 
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+  DA T SS++  C  L +  +   +H   +K G    +++ +  I+ Y K G + 
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE---LNEFSLTAVLG 187
                F      D V + +++ G+   G+   + E+F  MR  G+    L   SL + + 
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
              D+  G  +H + V+ G+  G      NAI+++Y +  +   A +MFD +   D VSW
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDII-AGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSW 341

Query: 248 SERIAAACD---GVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           +  I          EA  ++  ++ ++  +  + T +++L +      L+ G ++ A   
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI 401

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K G    V +G  +I +Y KCG++++A  +F+    + +  WN++I+G   +G   +AL 
Sbjct: 402 KTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALS 461

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTY 422
           +F  M +  + P+  T  S+L A S++  + Q     + +  + G        +C++  +
Sbjct: 462 LFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMF 521

Query: 423 GKCNALNES 431
           G+   L+++
Sbjct: 522 GRAGQLDDA 530



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 159/332 (47%), Gaps = 22/332 (6%)

Query: 36  RFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---C 91
           R +FD   +RD++T+N++ISG  +  Q   A+++F  +R  G+ PD  T  SL  A   C
Sbjct: 225 RKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQC 284

Query: 92  GSLQENEIVHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
           G +     VH   ++ G+    +   +  ++ YAK  +I +A+  F      D V++  +
Sbjct: 285 GDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTL 344

Query: 151 VCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVG 206
           + GY+ NG   ++  V+  M +  GL+  + +  +VL A      +++G ++H   +K G
Sbjct: 345 ITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTG 404

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA---CDGVEAFGL 263
               V  ++   +++LY +CG+  +A+ +F++        W+  I+       G +A  L
Sbjct: 405 LNLDV--YVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSL 462

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYG 322
           F  ++      +  T ++LL++     ++  G+          G   +      ++ M+G
Sbjct: 463 FSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFG 522

Query: 323 KCGQVNDARSIFDYL----IFKDSVSWNSMIA 350
           + GQ++DA   FD++    I  DS  W +++ 
Sbjct: 523 RAGQLDDA---FDFIRNMPIKPDSAIWGALLG 551



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L IK G +LD  + T +I  + K      A      T  R    +NA+ISG+    
Sbjct: 395 RMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHG 454

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL LF +++ +G+ PD  TF SL+ AC
Sbjct: 455 HGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 205/651 (31%), Positives = 332/651 (50%), Gaps = 63/651 (9%)

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           +++  M+ LG   + ++   VL A  ++     G  +H      GF   V   + N +++
Sbjct: 131 QLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNV--FVGNGLVS 188

Query: 222 LYVRCGQKLDAVKMFDEITEP---DVVSWSERIAA---ACDGVEAFGLFKDLRFN-DFQI 274
           +Y RCG   +A ++FDE+ E    D+VSW+  +AA     D + A  +F+ +  +   + 
Sbjct: 189 MYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP 248

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  +++N+L +         GKQ+  +  + G  E V +GNA++ MY KCG + +A  +F
Sbjct: 249 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 308

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFN----------------------------------- 359
           + +  KD VSWN+M+ GYS+ G F+                                   
Sbjct: 309 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 368

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS------ 413
           +ALD+F  ML     PN  T+ S+L   +++ +L    + H H IK    LD++      
Sbjct: 369 EALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDL 428

Query: 414 -MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH----AEALELYRT 468
            +I+ LI  Y KC +   ++ +   I  K+   +    +VL+  +       EALEL+  
Sbjct: 429 MVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTW--TVLIGGNAQHGEANEALELFSQ 486

Query: 469 IWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD-IFVESAVIDMYCK 525
           +      V  N  T S  L ACA +  L  G+ IH   L+ R++   +FV + +IDMY K
Sbjct: 487 MLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSK 546

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            G ++ A+  F  + + +   W ++M GY  HG   E   +F +M K  + PD +T++ V
Sbjct: 547 SGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVV 606

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L +C H+G+V +   Y + M+   G++P  EHYAC+VDLL R G L+ A   I  MP+ P
Sbjct: 607 LYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKP 666

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
              +W +LLSAC +Y N++LG  A ++LLEL+  N+ +Y LLSN+YA+A  W DV ++R 
Sbjct: 667 TPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRY 726

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            MK   + K PG SW+     T  F+AGD SH  S++IY  L  L + + A
Sbjct: 727 LMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKA 777



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 259/559 (46%), Gaps = 76/559 (13%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARFCQS 62
           LL++   H DP   T +IS +  F    +A   L      +  +  +N LI         
Sbjct: 71  LLVQGLPH-DP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFL 126

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGF 119
              L+L+ R++  G RPD +TF  ++KACG   S +    VH V    GF   V++ +G 
Sbjct: 127 EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGL 186

Query: 120 IENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGL 175
           +  Y + G   +A   F +  +    D V++ ++V  Y+  G+  ++ ++F  M   LG+
Sbjct: 187 VSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGI 246

Query: 176 ELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +  SL  VL A   V     G+Q+HG+ ++ G    V   + NA++++Y +CG   +A
Sbjct: 247 RPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV--FVGNAVVDMYAKCGMMEEA 304

Query: 233 VKMFDEITEPDVVSWSERIAAACD------------------------------------ 256
            K+F+ +   DVVSW+  +                                         
Sbjct: 305 NKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQR 364

Query: 257 --GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM------ 308
             G EA  +F+ +     + N  T+++LLS       L  GK+    C+ + ++      
Sbjct: 365 GLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETH--CHAIKWILNLDEN 422

Query: 309 ---EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIAGYSENGFFNQALD 363
              + + + NALI MY KC     AR++FD +  KD   V+W  +I G +++G  N+AL+
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482

Query: 364 MFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI---SCL 418
           +F  ML+    ++PN +T++  L A +   +L+   Q+H++++++ F  + +M+   +CL
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRF--ESAMLFVANCL 540

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y K   ++ ++ V   + ++N V   +L +         EAL+++  +       +G
Sbjct: 541 IDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDG 600

Query: 479 STFSIVLKACAAMTDLEQG 497
            TF +VL AC+    ++QG
Sbjct: 601 VTFVVVLYACSHSGMVDQG 619



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 240/519 (46%), Gaps = 65/519 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR---DIITYNALISGLAR 58
           +++++  +G   +  +   L+S + +   +  A +   + + R   D++++N++++   +
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226

Query: 59  FCQSGPALKLFDRLRYQ-GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
              S  A+K+F+R+    G+RPDA +  +++ AC   G+    + VHG  L+ G    V+
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286

Query: 115 LVSGFIENYAKSGEIVSAEMCFR-----------------------------------DC 139
           + +  ++ YAK G +  A   F                                    + 
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIH 199
           ++L+ V ++A++ GY   G   ++ +VF +M   G E N  +L ++L        G  +H
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGC--ASAGTLLH 404

Query: 200 GFGVKVGFLSGVCN----------HLNNAIMNLYVRCGQKLDAVKMFDEITEPD--VVSW 247
           G       +  + N           + NA++++Y +C     A  MFD I   D  VV+W
Sbjct: 405 GKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTW 464

Query: 248 SERI---AAACDGVEAFGLFKD-LRFNDFQI-NEYTMINLLSSVGGERILRAGKQIQAFC 302
           +  I   A   +  EA  LF   L+ ++F + N +T+   L +      LR G+QI A+ 
Sbjct: 465 TVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYV 524

Query: 303 YKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
            +  F   ++ + N LI MY K G V+ AR +FD +  ++ VSW S++ GY  +G   +A
Sbjct: 525 LRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEA 584

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLIT 420
           L +F  M +  L+P+G T   +L A S+S  + Q +   + + K  G +      +C++ 
Sbjct: 585 LQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVD 644

Query: 421 TYGKCNALNESKRVLSEIDKK--NAVHINALASVLVYAS 457
              +   L+E+  ++  +  K   AV +  L++  VYA+
Sbjct: 645 LLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYAN 683



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 8/271 (2%)

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN +I      GF    L ++  M      P+ YT   +L+A     S +    VH+ + 
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK---NAVHINALASVLVYASCHAE 461
            SGF  +  + + L++ YG+C A   +++V  E+ ++   + V  N++ +  +       
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232

Query: 462 ALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           A++++ R         +  +   VL ACA++    +GK +H  AL++   +D+FV +AV+
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG +E+A + F ++    +  WNAM+ GY+Q G + +   LF K+ +  ++ + +
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352

Query: 581 TYLAVLTSCCHAGLVREA----RTYLSCMSD 607
           T+ AV+      GL  EA    R  L C S+
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSE 383



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 150/305 (49%), Gaps = 26/305 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFD---TQNRDIITYNALISGLARFCQSGPALKLFD 70
           D ++   LI  ++K     +A R +FD    ++R ++T+  LI G A+  ++  AL+LF 
Sbjct: 427 DLMVINALIDMYSKCKS-PKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 485

Query: 71  RLRYQG--LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG-FIENYA 124
           ++      + P+AFT S  + AC   G+L+    +H   L+  F S +  V+   I+ Y+
Sbjct: 486 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 545

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           KSG++ +A + F +    + V++T+++ GY  +G  +++ ++F EM+ + L  +  +   
Sbjct: 546 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVV 605

Query: 185 VLGA---SFDVKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           VL A   S  V +G    +G     G + G  ++    +++L  R G+  +A+++   + 
Sbjct: 606 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY--ACMVDLLSRAGRLDEAMELIRGMP 663

Query: 241 -EPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            +P    W   + +AC       ++ ++   ++  N+  ++ L S   G   L +     
Sbjct: 664 MKPTPAVWVA-LLSACR------VYANVELGEYAANQ--LLELESGNDGSYTLLSNIYAN 714

Query: 300 AFCYK 304
           A C+K
Sbjct: 715 ARCWK 719


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/643 (30%), Positives = 339/643 (52%), Gaps = 17/643 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELN 178
           I  Y K G++ SA   F    D   V +T ++  Y  N  FD++ ++F +M RS  L  +
Sbjct: 82  ISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLP-D 140

Query: 179 EFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVK 234
             + T +L    D        Q+H F VK+GF + +   + N ++  Y    ++LD A  
Sbjct: 141 YVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEV-RRLDLACV 199

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+EI + D V+++  I     DG+  EA  LF  +R +  + +++T   +L +V G   
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHD 259

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G+Q+       GF    S+GN ++  Y K  +V + R++F+ +   D VS+N +I+ 
Sbjct: 260 FALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISS 319

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS+   + ++L++F  M         +  A++L   +N  SL+   QVH   I +     
Sbjct: 320 YSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVA---TA 376

Query: 412 DSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           DS++   + L+  Y KC   +E++ +   + +++ V   AL S  V    H   L+L+  
Sbjct: 377 DSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTK 436

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           + G+    + STF+ VLKA A    L  GK +H   +++   +++F  S ++DMY KCG+
Sbjct: 437 MRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 496

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I+DA + F ++   +   WNA++  YA +G        F KM + G++PD ++ L VL +
Sbjct: 497 IKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIA 556

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H G V +   +   MS ++G+ P+ +HYAC++DLLGR G    A+  +D+MP  PD  
Sbjct: 557 CSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 616

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           +W S+L+AC IY N  L   A  +L  ++   + + YV +SN+YA+AG W +V  ++K M
Sbjct: 617 MWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAM 676

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +E+ + K P YSW+ V    H F + D +H    EI K++ +L
Sbjct: 677 RERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINEL 719



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 279/590 (47%), Gaps = 48/590 (8%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFD 70
           H + + + T+IS + K  D   A R LFD   +R ++T+  L+   A       A KLF 
Sbjct: 72  HKNTVSTNTMISGYVKMGDLSSA-RHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFR 130

Query: 71  RLRYQGLRPDAFTFSSLVKACG-SLQENEI--VHGVCLKLGFSSRVYLV--SGFIENYAK 125
           ++      PD  TF++L+  C  ++ +N +  VH   +KLGF + ++L   +  +++Y +
Sbjct: 131 QMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCE 190

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
              +  A + F + LD D+V +  ++ GY  +G + ++  +F++MR  G + ++F+ + V
Sbjct: 191 VRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGV 250

Query: 186 LGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L A     D   G+Q+HG  V  GF       + N I++ Y +  + L+   +F+E+ E 
Sbjct: 251 LKAVVGLHDFALGQQLHGLSVTTGFSRDAS--VGNQILHFYSKHDRVLETRNLFNEMPEL 308

Query: 243 DVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D VS++  I++        E+  LF++++   F    +    +LS       L+ G+Q+ 
Sbjct: 309 DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVH 368

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
                     ++ +GN+L+ MY KC   ++A  IF  L  + +VSW ++I+GY + G   
Sbjct: 369 CQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHG 428

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
             L +F  M   +L  +  T A++L+A +   SL    Q+H+ II+SG L +    S L+
Sbjct: 429 AGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLV 488

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC ++ ++ +V  E+  +NAV  NAL S          A+  +  +  S  + +  
Sbjct: 489 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSV 548

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +   VL AC+    +EQG                    A+  +Y     I   K+ +   
Sbjct: 549 SILGVLIACSHCGFVEQGTEFF---------------QAMSPIY----GITPKKKHY--A 587

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           C   L G N         G + E   L ++M     +PDEI + +VL +C
Sbjct: 588 CMLDLLGRN---------GRFAEAEKLMDEMP---FEPDEIMWSSVLNAC 625



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 185/415 (44%), Gaps = 19/415 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L +  G   D  +   ++  ++K            +    D ++YN +IS  ++  
Sbjct: 265 QLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAE 324

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   +L LF  ++  G     F F++++       SLQ    VH   +     S +++ +
Sbjct: 325 QYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGN 384

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK      AE+ F+       V++TA++ GYV  G      ++F +MR   L  
Sbjct: 385 SLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRA 444

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   VL AS        G+Q+H F ++ G L  V +   + ++++Y +CG   DAV+
Sbjct: 445 DQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFS--GSGLVDMYAKCGSIKDAVQ 502

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+E+ + + VSW+  I+A     DG  A G F  +  +  Q +  +++ +L +      
Sbjct: 503 VFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGF 562

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G +  QA     G          ++ + G+ G+  +A  + D + F+ D + W+S++
Sbjct: 563 VEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 622

Query: 350 AG---YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV---SNSKSLKQAMQ 398
                Y       +A +    M +        +M++I  A     N + +K+AM+
Sbjct: 623 NACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMR 677



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 174/385 (45%), Gaps = 9/385 (2%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N +IS Y K G ++ AR +FD +  +  V+W  ++  Y+ N  F++A  +F  M     +
Sbjct: 79  NTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTL 138

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC--LITTYGKCNALNESK 432
           P+  T  ++L   +++       QVH+  +K GF  +  +  C  L+ +Y +   L+ + 
Sbjct: 139 PDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLAC 198

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            +  EI  K++V  N L +       + EA+ L+  +  S  + +  TFS VLKA   + 
Sbjct: 199 VLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLH 258

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
           D   G+ +H L++   + +D  V + ++  Y K   + + +  F ++       +N ++ 
Sbjct: 259 DFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVIS 318

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            Y+Q   Y E  NLF +M   G       +  +L+   +   ++  R  + C + +    
Sbjct: 319 SYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQ-VHCQAIVATAD 377

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
             L     +VD+  +  + + A++    +        W +L+S     G    GL   +K
Sbjct: 378 SILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVS-WTALISGYVQKGLHGAGLKLFTK 436

Query: 673 L--LELQPDNESTYVLLSNLYASAG 695
           +    L+ D +ST+  +  L ASAG
Sbjct: 437 MRGANLRAD-QSTFATV--LKASAG 458


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 208/637 (32%), Positives = 326/637 (51%), Gaps = 15/637 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++   KSG +  A   F      + VA+T  + G   NG  + +  +F +M   G+  N+
Sbjct: 77  LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136

Query: 180 FSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+  A L A          EQ+H   V+ GF +     + + ++ LY RCG    A ++F
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAW--IGSCLIELYSRCGSLRAAEEVF 194

Query: 237 DEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             +  PDVV ++  ++A C   E   A  +   +     Q NE+TM ++L+    E    
Sbjct: 195 RRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLA----ECPRG 250

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+QI  +  KV   + V    ALI  Y + G    A+++F+ L  K+ VSW SM+    
Sbjct: 251 IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCI 310

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +G  + AL +F  M+   + PN +  +  L A     S+    Q+H   IK   + D  
Sbjct: 311 RDGRLDDALRVFSEMISEGVQPNEFAFSIALSACG---SVCLGRQIHCSAIKRDLMTDIR 367

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L++ YG+   ++E + VL +I+  + V   A  S         +A+ L   +    
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              N   FS  L +CA +  L QG+ +HCLALK   D  +   +A+I+MY KCG I  A+
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSAR 487

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            AF  +    +  WN+++ G AQHG  +     F++M     +PD+ T+L+VL  C HAG
Sbjct: 488 LAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAG 547

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV+E  T+   M+D +GL P   HYAC++D+LGR G    A   I+ MP  PD  IW++L
Sbjct: 548 LVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTL 607

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L++C ++ N+D+G LA  KL+EL   + ++YVL+SNLYA    W D  ++R+ M E  + 
Sbjct: 608 LASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVK 667

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K+ G+SWI V    + F AGD SH  S  IY+ L +L
Sbjct: 668 KDAGWSWIEVKNEVNTFVAGDMSHPDSTSIYQMLAEL 704



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 222/444 (50%), Gaps = 11/444 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + LI  +++    R A       +  D++ Y +L+S L R  
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   A+ +  ++  QGL+P+  T +S++  C      E +HG  LK+  S  VY  +  I
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR-GIGEQIHGYMLKVMGSQSVYASTALI 275

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + Y++ G+  +A+  F +    + V++ +M+   + +G  D +  VF EM S G++ NEF
Sbjct: 276 DFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEF 335

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLDAVKMFDE 238
           + +  L A   V  G QIH   +K   ++ +   ++NA++++Y R G   +L+AV    +
Sbjct: 336 AFSIALSACGSVCLGRQIHCSAIKRDLMTDI--RVSNALLSMYGRSGFVSELEAV--LGK 391

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I  PD+VSW+  I+A        +A  L   +    F  N+Y   + LSS     +L  G
Sbjct: 392 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQG 451

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +Q+     K+G    V  GNALI+MY KCG++  AR  FD +   D +SWNS+I G +++
Sbjct: 452 RQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQH 511

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSM 414
           G  N AL+ F  M      P+  T  S+L   +++  +K+       +  + G     S 
Sbjct: 512 GDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSH 571

Query: 415 ISCLITTYGKCNALNESKRVLSEI 438
            +C+I   G+     E+ R++  +
Sbjct: 572 YACMIDMLGRNGRFAEALRMIENM 595



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 216/458 (47%), Gaps = 13/458 (2%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD   R +++ +   ISG  R  +   A  +F  +   G+ P+ F  ++ + AC +   
Sbjct: 92  LFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGA 151

Query: 97  N---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
               E VH + ++ GF++  ++ S  IE Y++ G + +AE  FR     D V YT++V  
Sbjct: 152 LGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSA 211

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
              NGE  ++ +V  +M   GL+ NE ++T++L A      GEQIHG+ +KV     V  
Sbjct: 212 LCRNGELARAVDVLCQMTRQGLQPNEHTMTSML-AECPRGIGEQIHGYMLKVMGSQSV-- 268

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFN 270
           + + A+++ Y R G    A  +F+ +   +VVSW   +     DG   +A  +F ++   
Sbjct: 269 YASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISE 328

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
             Q NE+     LS+ G   +   G+QI     K   M  + + NAL+SMYG+ G V++ 
Sbjct: 329 GVQPNEFAFSIALSACGSVCL---GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSEL 385

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            ++   +   D VSW + I+   +NGF  +A+ +   M      PN Y  +S L + ++ 
Sbjct: 386 EAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADL 445

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             L Q  Q+H   +K G        + LI  Y KC  +  ++     +D  + +  N+L 
Sbjct: 446 ALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLI 505

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             L        ALE +  +  S    + STF  VL  C
Sbjct: 506 HGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGC 543



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 176/358 (49%), Gaps = 10/358 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K         ST LI  ++++ DF  A     + ++++++++ +++    R  
Sbjct: 254 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDG 313

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   AL++F  +  +G++P+ F FS  + ACGS+     +H   +K    + + + +  +
Sbjct: 314 RLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALL 373

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y +SG +   E       + D V++TA +     NG  +K+  + ++M S G   N++
Sbjct: 374 SMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 433

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           + ++ L +  D+    +G Q+H   +K+G    VC    NA++N+Y +CG+   A   FD
Sbjct: 434 AFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCT--GNALINMYSKCGRIGSARLAFD 491

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   DV+SW+  I   A   D   A   F ++  +D++ ++ T +++L       +++ 
Sbjct: 492 VMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKE 551

Query: 295 GKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
           G+   +    + G     S    +I M G+ G+  +A  + + + F+ D + W +++A
Sbjct: 552 GETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609


>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 887

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 209/706 (29%), Positives = 349/706 (49%), Gaps = 26/706 (3%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
           A +   +  +R+++++ A++S   R        + F  +   G  P+ F+ ++++ AC S
Sbjct: 41  ALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLATMLTACHS 100

Query: 94  L---QENEIV-----HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           +     N+++     HGV ++ G  S  ++ S  +  YAK G I +A+  F    + D  
Sbjct: 101 MVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLT 160

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS-LTAVLGASFDVKEG--EQIHGFG 202
            + AM+ GYV NG    +    + M   GL  + ++ ++AV   S   + G   Q+H   
Sbjct: 161 CWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLV 220

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVE 259
           +     S     + N+++++Y R  QK  A  +F +I + D VSW+   +      D   
Sbjct: 221 IHSMLESNTS--VMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKA 278

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
            FG   D+    F+ NE T   LL   G +     G QI A  Y+ G+ + V + NA+I+
Sbjct: 279 VFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVIN 338

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           M  +CG ++ A   F  L F++ V+WN +IAGY        A+ +F  ++     P+ +T
Sbjct: 339 MLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFT 398

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGF----LLDDSMISCLITTYGKCNALNESKRVL 435
            +++L A   +   +   Q+H+ I+K GF     +  S+I      +G   ++  S +++
Sbjct: 399 YSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFG---SVQSSLKII 455

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTDL 494
            +  K   V   A+ S  +    + E + L+    G S  + +    + VL ACA    +
Sbjct: 456 EDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALI 515

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMM 552
              + IH L LK  +     V SAV+D Y KCG I  A+ AF  +    +    +N M+ 
Sbjct: 516 RHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLT 575

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            YA HG  HE  NL+ +M+K  + P   T++A+L++C H GLV + +   S M   +G+ 
Sbjct: 576 AYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMH 635

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P   +YAC+VDLL R GLL+ AK  ID MP  P   +W+SL++ C I+GN  LG+LA  +
Sbjct: 636 PARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGVLAAEQ 695

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           +L + P ++  YV LSN+YA  G W    + R+ M +  L K  GY
Sbjct: 696 ILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNNLQKVHGY 741



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/575 (22%), Positives = 255/575 (44%), Gaps = 23/575 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ + ++ G   +P + ++L+  + K      A R     +N+D+  +NA++ G      
Sbjct: 115 LHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGF 174

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              A+     + + GL PD +T+ S VKAC    +      +H + +     S   +++ 
Sbjct: 175 GHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNS 234

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGL 175
            ++ Y ++ +  +A   FR     D V++  M  G+  +   +  K VF   ++M   G 
Sbjct: 235 LVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHD---EDDKAVFGYLIDMSRTGF 291

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NE + + +L   GA  +   G QI     + G+   V   + NA++N+  RCG    A
Sbjct: 292 KPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL--VANAVINMLFRCGLLDRA 349

Query: 233 VKMFDEITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F  +T  ++V+W+E IA         +A  LF+ L     + +E+T   +LS+    
Sbjct: 350 YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEA 409

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWNSM 348
              R  +QI A   K GF     +  +LI       G V  +  I +     + VSW ++
Sbjct: 410 HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAI 469

Query: 349 IAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           I+ + ++G  ++ + +F     + +  P+ + +A++L A +N+  ++    +HS ++K+G
Sbjct: 470 ISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG 529

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALEL 465
                 + S ++  Y KC  +  ++   + +     +A+  N + +         EAL L
Sbjct: 530 HSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNL 589

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYC 524
           Y  +  +      +TF  +L AC+ +  +EQGK      L A          A ++D+  
Sbjct: 590 YEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLA 649

Query: 525 KCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           + G +++AK     +  +   A W +++ G   HG
Sbjct: 650 RKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHG 684



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 134/605 (22%), Positives = 244/605 (40%), Gaps = 31/605 (5%)

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           KLG  +  + ++     YA+ G + SA   F +    + V++TAMV     NG       
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 166 VFVEMRSLGLELNEFSLTAVLGA--------SFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
            FV M   G   NEFSL  +L A        S  +     +HG  V+ G  S     + +
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNP--FVGS 132

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQI 274
           +++ +Y + G+   A + F  I   D+  W+  +        G  A      +  +    
Sbjct: 133 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAP 192

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + YT I+ + +         G+Q+             S+ N+L+ MY +  Q   A S+F
Sbjct: 193 DRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVF 252

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +  KD+VSWN+M +G++ +            M      PN  T + +L      ++  
Sbjct: 253 RKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENAS 312

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +Q+ +   + G+  +  + + +I    +C  L+ +      +  +N V  N + +   
Sbjct: 313 LGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYG 372

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
             S   +A+ L+R++       +  T+S VL A          + IH + LK  +    F
Sbjct: 373 LFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQF 432

Query: 515 VESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           V +++I       G+++ + +      +  L  W A++  + +HG   EV  LFN     
Sbjct: 433 VSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGD 492

Query: 574 GV-KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLG 626
              KPDE     VL +C +A L+R  R        +H L+ +  H       + +VD   
Sbjct: 493 STNKPDEFILATVLNACANAALIRHCRC-------IHSLVLKTGHSNHFCVASAVVDAYA 545

Query: 627 RVGLLEGAKMTIDQM-PIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNEST 683
           + G +  A+     +     DA ++ ++L+A   +G I   L L       +L P   + 
Sbjct: 546 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 605

Query: 684 YVLLS 688
             +LS
Sbjct: 606 VAILS 610



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 175/366 (47%), Gaps = 17/366 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L  ++G+  + +++  +I+   +     RA+ F      R+I+T+N +I+G   F 
Sbjct: 316 QIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFS 375

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A++LF  L   G RPD FT+S+++ A       +++E +H + LK GF+S  ++ +
Sbjct: 376 HSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVST 435

Query: 118 GFIE-NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
             I+ N A  G + S+     D   ++ V++ A++  ++ +G  D+   +F   R     
Sbjct: 436 SLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTN 495

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +EF L  VL A  +   ++    IH   +K G  +  C  + +A+++ Y +CG+   A
Sbjct: 496 KPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFC--VASAVVDAYAKCGEITSA 553

Query: 233 VKMFDEITEP--DVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
              F  ++    D + ++  + A A  G+  EA  L++++          T + +LS+  
Sbjct: 554 ESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACS 613

Query: 288 GERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSW 345
              ++  GK          G     +    L+ +  + G +++A+ + D + F+     W
Sbjct: 614 HLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVW 673

Query: 346 NSMIAG 351
            S++ G
Sbjct: 674 RSLVNG 679


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 212/687 (30%), Positives = 348/687 (50%), Gaps = 29/687 (4%)

Query: 73  RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           R++ + P AF+ +       SL     +H V +  G      + +     YAK+G   SA
Sbjct: 30  RHRRVNPIAFSAAVRASDPASLPA---LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSA 86

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGE-FDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
              F      D  +Y  ++  +    E  D +  +   +RS  +  +  + T  L  +  
Sbjct: 87  VGVFAAARARDVSSYNTILSAFPDPAEALDFASWM---LRSGAVRPDAVTCTVALSLAAG 143

Query: 192 VKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
             EG    Q+H    + G  + V   + NA++  Y R G   +A  +FD++   D+VSW+
Sbjct: 144 RGEGFLVRQLHALAWRSGLAADV--FVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWN 201

Query: 249 ERIAA-ACDG---VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
             I   A DG    E  G+F + LR  D Q +  ++ +++ + GGE  L  G+Q+  F  
Sbjct: 202 ALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAV 261

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+G    VSIGN L++MY KCG    AR +FD +  +D VSW + I+   E+     AL 
Sbjct: 262 KLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDGED-----ALT 316

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M    + PN  T  +++ A+      + A  VH+  +K+    + +  + LIT Y 
Sbjct: 317 LFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYA 376

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           K   +++++ V   + ++  +  NA+ S         +ALEL+ ++   C   N +TF+ 
Sbjct: 377 KARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFAS 435

Query: 484 VLKACAAM--TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           VL A  A+    +  G+  H  AL   +    +V  A+IDMY K G +E++++AF +  +
Sbjct: 436 VLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQ 495

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            SL  W A++   A+HG Y  V +LF  M++ GV PD +  LAVLT+C + G+V   R  
Sbjct: 496 RSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDI 555

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M+   G+    EHY+C+VD+LGR G L  A+  + +MP  P     QSLL AC I+G
Sbjct: 556 FDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHG 615

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           + ++G      L E +P     YVLLSN+YA  G W+ V K+R++M+++ + KE G+SW+
Sbjct: 616 DAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWV 675

Query: 722 HVGG----YTHHFYAGDSSHSQSKEIY 744
             G     + H F + D++H +++EIY
Sbjct: 676 DAGAGEALHLHKFSSDDTTHPRTEEIY 702



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 267/545 (48%), Gaps = 22/545 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++++ +  G H    ++ +L + + K   F  A       + RD+ +YN ++S    F  
Sbjct: 54  LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSA---FPD 110

Query: 62  SGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSLQENEIV---HGVCLKLGFSSRVYLVS 117
              AL      LR   +RPDA T +  +       E  +V   H +  + G ++ V++ +
Sbjct: 111 PAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGN 170

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEM-RSLGL 175
             +  Y++ G +  A   F D    D V++ A++CG   +G+       VF+ M R   +
Sbjct: 171 ALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDV 230

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +  S+ +V+   G    ++ G Q+HGF VK+G    V   + N ++ +Y +CG    A
Sbjct: 231 QPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVS--IGNVLVAMYYKCGAPGSA 288

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            ++FD ++E DVVSW+  I  + DG +A  LF  +R +    NE T + L+S++  +   
Sbjct: 289 RRLFDAMSERDVVSWTTAI--SMDGEDALTLFNGMRRDGVPPNEVTFVALMSALPADCPA 346

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           R  + + A C K       +  N+LI+MY K  +++DAR +FD +  ++ ++WN++I+GY
Sbjct: 347 RGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGY 406

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA--MQVHSHIIKSGFLL 410
           ++NG  N AL++F  M    L PN  T AS+L AV+  +++  A     HS  +  GF  
Sbjct: 407 AQNGRCNDALELFSSMAR-CLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGD 465

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
            + +   LI  Y K   L ES++   E ++++ +   A+ S       +   + L+  + 
Sbjct: 466 SEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMA 525

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGT 528
            S    +G     VL AC     ++ G+ I   ++ A    +++ E  S V+DM  + G 
Sbjct: 526 RSGVAPDGVVLLAVLTACRYGGMVDAGRDIFD-SMAADRGVELWPEHYSCVVDMLGRAGR 584

Query: 529 IEDAK 533
           + +A+
Sbjct: 585 LAEAE 589



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 221/479 (46%), Gaps = 30/479 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L  ++G   D  +   L++ +++      A     D   RD++++NALI GLA   
Sbjct: 152 QLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLA--- 208

Query: 61  QSG--PA--LKLFDR-LRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
           Q G  PA  + +F R LR   ++PD  +  S++ ACG    L+    VHG  +KLG    
Sbjct: 209 QDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGY 268

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V + +  +  Y K G   SA   F    + D V++T  +     +GE   +  +F  MR 
Sbjct: 269 VSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS---MDGE--DALTLFNGMRR 323

Query: 173 LGLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  NE +  A+   L A    +  + +H   +K   +SG     +N+++ +Y +  + 
Sbjct: 324 DGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAA-VSGEAA-ASNSLITMYAKARRM 381

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA  +FD +   ++++W+  I+  A +G   +A  LF  +       NE T  ++LS+V
Sbjct: 382 DDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAV 440

Query: 287 GG-ERILRA-GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
              E +  A G+   +    +GF +   +  ALI MY K G + ++R  F     +  ++
Sbjct: 441 TAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIA 500

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHI 403
           W ++I+  + +G +   + +F  M    + P+G  + ++L A      +     +  S  
Sbjct: 501 WTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMA 560

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
              G  L     SC++   G+   L E++ ++  +    +V  +AL S+L     H +A
Sbjct: 561 ADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSV--SALQSLLGACRIHGDA 617


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 187/557 (33%), Positives = 305/557 (54%), Gaps = 6/557 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D+K  +QIH   +  G        L+N++MN YV CG   DA ++F      +VVSW+  
Sbjct: 36  DLKPLQQIHAQIITSGLTHNT--FLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTIL 93

Query: 251 IAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+        VEA  +F+++   +F+ N  T+ ++L +     ++R  K +  F  + GF
Sbjct: 94  ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              V +  AL+ MY K G +  AR +F+ +  ++ VSWN++++GYS++GF  +A+D+F  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    L+ + YT+ S++ A  +   L+    +H  II++G+  D  + + L+  Y   N 
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLK 486
           ++++ RV SE+  K+      + +          A++ +  + G    +++      +L 
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           +C+    L+QG+ +H LA+K  +  +IFV SAVIDMY  CG +EDAKR F  +    +  
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WNAM+ G   +G   +  +LF +M   G+ PDE T+++VL +C HAG+V E       M 
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
                IP L+HYAC++D+LGR G L+ A   I+ MP  PD  ++ +LL AC I+GNI LG
Sbjct: 454 KTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLG 513

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
                K+ E++P++   YVLLSN+YA AG W  V   R  ++ K L K+PG+S I +   
Sbjct: 514 HEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQE 573

Query: 727 THHFYAGDSSHSQSKEI 743
            + F AG+  H Q  +I
Sbjct: 574 IYTFMAGEKDHPQYFKI 590



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 241/487 (49%), Gaps = 36/487 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I +G   +  LS +L++ +        A +    T  ++++++  LISGLA+  
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ +F  +     +P+A T SS++ A  +L    I   VH   ++ GF   V++ +
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G +  A   F    + + V++ A+V GY  +G  +++ ++F  MR  GL +
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV 221

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++ +++ AS  V   + G  IHGF ++ G+ +    H+  A+M++YV      DA +
Sbjct: 222 DFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND--KHIKTALMDIYVSHNCVDDAHR 279

Query: 235 MFDEITEPDVVSWSERIAAACDG------VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           +F E+   DV +W+  +     G      ++ F   K L   + +++   ++ +LSS   
Sbjct: 280 VFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFN--KMLGIQNLKLDSIVLMGILSSCSH 337

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L+ G+++ A   K  F   + +G+A+I MY  CG + DA+  F  +  KD V WN+M
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAG   NG+   A+D+F  M    L P+  T  S+L A S++  + + +Q+  H++K+  
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 409 LLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            + +    +C+I   G+   L+ +   ++ +  +                      ++Y 
Sbjct: 458 DIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ-------------------PDFDVYS 498

Query: 468 TIWGSCR 474
           T+ G+CR
Sbjct: 499 TLLGACR 505


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 219/733 (29%), Positives = 359/733 (48%), Gaps = 68/733 (9%)

Query: 85  SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           S+L   C SL   E++H   L  G     +  +  I  Y        A    R      +
Sbjct: 33  STLFHQCKSLASAELIHQQLLVQGLP---HDPTHIISMYLTFNSPAKALSVLRRLHPSSH 89

Query: 145 VA--YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIH 199
               +  ++   V  G  +   +++  M+ LG   + ++   VL A  ++     G  +H
Sbjct: 90  TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 149

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP---DVVSWSERIAA--- 253
                 GF   V   + N ++++Y RCG   +A ++FDE+ E    D+VSW+  +AA   
Sbjct: 150 AVVFASGFEWNV--FVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207

Query: 254 ACDGVEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
             D + A  +F+ +  +   + +  +++N+L +         GKQ+  +  + G  E V 
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM---- 368
           +GNA++ MY KCG + +A  +F+ +  KD VSWN+M+ GYS+ G F+ AL +F  +    
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327

Query: 369 LEFSLI-------------------------------PNGYTMASILEAVSNSKSLKQAM 397
           +E +++                               PN  T+ S+L   + + +L    
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387

Query: 398 QVHSHIIKSGFLLDDS-------MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           + H H IK    LD++       +I+ LI  Y KC +   ++ +   I  K+   +    
Sbjct: 388 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTW-- 445

Query: 451 SVLVYASCH----AEALELYRTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLA 504
           +VL+  +       EALEL+  +      V  N  T S  L ACA +  L  G+ IH   
Sbjct: 446 TVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYV 505

Query: 505 LKARYDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
           L+ R++   +FV + +IDMY K G ++ A+  F  + + +   W ++M GY  HG   E 
Sbjct: 506 LRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEA 565

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
             +F +M K G+ PD +T++ VL +C H+G+V +   Y + M+   G++P  EHYAC+VD
Sbjct: 566 LQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVD 625

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           LL R G L+ A   I  MP+ P   +W +LLSAC +Y N++LG  A ++LLEL+  N+ +
Sbjct: 626 LLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGS 685

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           Y LLSN+YA+A  W DV ++R  MK   + K PG SW+     T  F+AGD SH  S++I
Sbjct: 686 YTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQI 745

Query: 744 YKELIKLYEHMVA 756
           Y  L  L + + A
Sbjct: 746 YDLLRDLMQRIKA 758



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 260/562 (46%), Gaps = 75/562 (13%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARF 59
           I+  L+  G   DP   T +IS +  F    +A   L      +  +  +N LI      
Sbjct: 48  IHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHL 104

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
                 L+L+ R++  G RPD +TF  ++KACG   S +    VH V    GF   V++ 
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEFDKSKEVFVEM-RS 172
           +G +  Y + G   +A   F +  +    D V++ ++V  Y+  G+  ++ ++F  M   
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224

Query: 173 LGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           LG+  +  SL  VL A   V     G+Q+HG+ ++ G    V   + NA++++Y +CG  
Sbjct: 225 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV--FVGNAVVDMYAKCGMM 282

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD--------------------------------- 256
            +A K+F+ +   DVVSW+  +                                      
Sbjct: 283 EEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGY 342

Query: 257 -----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM--- 308
                G EA  +F+ +R    + N  T+++LLS       L  GK+    C+ + ++   
Sbjct: 343 AQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETH--CHAIKWILNL 400

Query: 309 ------EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIAGYSENGFFNQ 360
                 + + + NALI MY KC     AR++FD +  KD   V+W  +I G +++G  N+
Sbjct: 401 DENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANE 460

Query: 361 ALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--- 415
           AL++F  ML+    ++PN +T++  L A +   +L+   Q+H++++++ F  + +M+   
Sbjct: 461 ALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRF--ESAMLFVA 518

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           +CLI  Y K   ++ ++ V   + ++N V   +L +         EAL+++  +      
Sbjct: 519 NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLV 578

Query: 476 VNGSTFSIVLKACAAMTDLEQG 497
            +G TF +VL AC+    ++QG
Sbjct: 579 PDGVTFVVVLYACSHSGMVDQG 600



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 151/305 (49%), Gaps = 26/305 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFD---TQNRDIITYNALISGLARFCQSGPALKLFD 70
           D ++   LI  ++K     +A R +FD    ++R ++T+  LI G A+  ++  AL+LF 
Sbjct: 408 DLMVINALIDMYSKCKS-PKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFS 466

Query: 71  RLRYQG--LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG-FIENYA 124
           ++      + P+AFT S  + AC   G+L+    +H   L+  F S +  V+   I+ Y+
Sbjct: 467 QMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYS 526

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           KSG++ +A + F +    + V++T+++ GY  +G  +++ ++F EM+ +GL  +  +   
Sbjct: 527 KSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVV 586

Query: 185 VLGA---SFDVKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           VL A   S  V +G    +G     G + G  ++    +++L  R G+  +A+++   + 
Sbjct: 587 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYA--CMVDLLSRAGRLDEAMELIRGMP 644

Query: 241 -EPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            +P    W   + +AC       ++ ++   ++  N+  ++ L S   G   L +     
Sbjct: 645 MKPTPAVWVA-LLSACR------VYANVELGEYAANQ--LLELESGNDGSYTLLSNIYAN 695

Query: 300 AFCYK 304
           A C+K
Sbjct: 696 ARCWK 700


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 205/638 (32%), Positives = 338/638 (52%), Gaps = 9/638 (1%)

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           GE   A   F    + D  ++  MV GY   G  +++ +++  M   G+  + ++   VL
Sbjct: 143 GETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVL 202

Query: 187 ---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
              G   D + G ++H   ++ GF   V   + NA+M +Y +CG  + A K+FD +   D
Sbjct: 203 RSCGGVPDWRMGREVHAHVLRFGFAEEV--DVLNALMTMYAKCGDVVAARKVFDSMAVMD 260

Query: 244 VVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
            +SW+  IA   +  E      LF  +  ++ Q N  T+ ++  + G    +   K++  
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              K GF   V+  N+LI MY   G +  AR++F  +  +D++SW +MI+GY +NGF ++
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK 380

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           AL+++  M   ++ P+  T+AS L A +   SL   +++H      GF+    + + L+ 
Sbjct: 381 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLE 440

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y K   ++++  V   + +K+ V  +++ +   +   + EAL  +R +    +  N  T
Sbjct: 441 MYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKP-NSVT 499

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F   L ACAA   L  GK IH   L+     + ++ +A+ID+Y KCG    A   F    
Sbjct: 500 FIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHG 559

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
              +  WN M+ G+  HG      + FN+M K G  PDE+T++A+L +C   G+V E   
Sbjct: 560 AKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWE 619

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
               M+D + ++P L+HYAC+VDLL RVG L  A   I++MPI PDA +W +LL+ C I+
Sbjct: 620 LFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 679

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
            +++LG LA   +LEL+P++   +VLL +LYA AG+W+ + ++RK M+EK L  + G SW
Sbjct: 680 RHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSW 739

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           + V G  H F   D SH Q +EI   L  +YE M A+ 
Sbjct: 740 VEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG 777



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 265/553 (47%), Gaps = 16/553 (2%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   ++S   +F +   A+R       RD+ ++N ++ G  +      AL L+ R+ + G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +RPD +TF  ++++CG + +  +   VH   L+ GF+  V +++  +  YAK G++V+A 
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---F 190
             F     +D +++ AM+ G+  NGE +   E+F+ M    ++ N  ++T+V  AS    
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D+   +++HG  VK GF + V     N+++ +Y   G    A  +F  +   D +SW+  
Sbjct: 311 DITFAKEMHGLAVKRGFATDVA--FCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368

Query: 251 IAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G   +A  ++  +  N+   ++ T+ + L++      L  G ++       GF
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 428

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           M  V + NAL+ MY K  +++ A  +F  +  KD VSW+SMIAG+  N    +AL  F H
Sbjct: 429 MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRH 488

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN  T  + L A + + +L+   ++H+H+++ G   +  + + LI  Y KC  
Sbjct: 489 MLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQ 547

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
              +         K+ V  N + +  V       AL  +  +       +  TF  +L A
Sbjct: 548 TGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCA 607

Query: 488 CAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK--ICRDSL 544
           C+    + +G +  H +  K     ++   + ++D+  + G + +A     +  I  D+ 
Sbjct: 608 CSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDA- 666

Query: 545 AGWNAMMMGYAQH 557
           A W A++ G   H
Sbjct: 667 AVWGALLNGCRIH 679



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 217/451 (48%), Gaps = 19/451 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           ++++ +++ G   +  +   L++ + K  D   A R +FD+    D I++NA+I+G    
Sbjct: 216 EVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAA-RKVFDSMAVMDCISWNAMIAGHFEN 274

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            +    L+LF  +    ++P+  T +S+  A G L +    + +HG+ +K GF++ V   
Sbjct: 275 GECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFC 334

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ YA  G +  A   F      D +++TAM+ GY  NG  DK+ EV+  M    + 
Sbjct: 335 NSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVS 394

Query: 177 LNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            ++ ++           S DV  G ++H      GF+S V   + NA++ +Y +  +   
Sbjct: 395 PDDITIASALAACACLGSLDV--GVKLHELAESKGFMSYVV--VTNALLEMYAKSKRIDK 450

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+++F  + E DVVSWS  IA  C      EA   F+ +   D + N  T I  L++   
Sbjct: 451 AIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAA 509

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              LR+GK+I A   + G      + NALI +Y KCGQ   A + F     KD VSWN M
Sbjct: 510 TGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIM 569

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSG 407
           IAG+  +G    AL  F  M++    P+  T  ++L A S    + +  ++ HS   K  
Sbjct: 570 IAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYS 629

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            + +    +C++    +   L E+   ++E+
Sbjct: 630 IVPNLKHYACMVDLLSRVGQLTEAYNFINEM 660



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 160/364 (43%), Gaps = 18/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++ L +K G   D     +LI  +       +A         RD +++ A+ISG  +  
Sbjct: 317 EMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNG 376

Query: 61  QSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL+++  +    + PD  T     +     GSL     +H +    GF S V + +
Sbjct: 377 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTN 436

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +E YAKS  I  A   F+   + D V++++M+ G+ +N    ++ E     R +  ++
Sbjct: 437 ALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFN---HRNFEALYYFRHMLADV 493

Query: 178 NEFSLTAV-----LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
              S+T +       A+  ++ G++IH   ++ G       +L NA+++LYV+CGQ   A
Sbjct: 494 KPNSVTFIAALAACAATGALRSGKEIHAHVLRCGI--AYEGYLPNALIDLYVKCGQTGYA 551

Query: 233 VKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F      DVVSW+  IA   A  +G  A   F  +       +E T + LL +    
Sbjct: 552 WAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRG 611

Query: 290 RILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNS 347
            ++  G ++  +   K   +  +     ++ +  + GQ+ +A +  + + I  D+  W +
Sbjct: 612 GMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGA 671

Query: 348 MIAG 351
           ++ G
Sbjct: 672 LLNG 675


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 169/523 (32%), Positives = 298/523 (56%), Gaps = 10/523 (1%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD++  P +  W+  I          +A  ++ +++      + +T  +LL +  G
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWN 346
              L+ G+ + A  +++GF   V + N LI++Y KC ++  AR++F+ L   +   VSW 
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++++ Y++NG   +AL++F HM +  + P+   + S+L A +  + LKQ   +H+ ++K 
Sbjct: 192 AIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G  ++  ++  L T Y KC  +  +K +  ++   N +  NA+ S         EA++++
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311

Query: 467 RTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
             +    ++V   T SI   + ACA +  LEQ ++++    ++ Y  D+F+ SA+IDM+ 
Sbjct: 312 HEMIN--KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG++E A+  F +     +  W+AM++GY  HG   E  +L+  M + GV P+++T+L 
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C H+G+VRE   + + M+D H + PQ +HYAC++DLLGR G L+ A   I  MP+ 
Sbjct: 430 LLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P   +W +LLSAC  + +++LG  A  +L  + P N   YV LSNLYA+A +W+ V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             MKEK L K+ G SW+ V G    F  GD SH + +EI +++
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQV 591



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 220/447 (49%), Gaps = 15/447 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ L+  G      L T LI   + F D   A +   D     I  +NA+I G +R  
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL ++  ++   + PD+FTF  L+KAC     LQ    VH    +LGF + V++ +
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           G I  YAK   + SA   F + L L     V++TA+V  Y  NGE  ++ E+F  MR + 
Sbjct: 159 GLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 175 LELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +  +L +VL A     D+K+G  IH   VK+G    +   L  ++  +Y +CGQ   
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL--EIEPDLLISLNTMYAKCGQVAT 275

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD++  P+++ W+  I+  A +G   EA  +F ++   D + +  ++ + +S+   
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L   + +  +  +  + + V I +ALI M+ KCG V  AR +FD  + +D V W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY  +G   +A+ ++  M    + PN  T   +L A ++S  +++     + +     
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKI 455

Query: 409 LLDDSMISCLITTYGKCNALNESKRVL 435
                  +C+I   G+   L+++  V+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVI 482



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 232/491 (47%), Gaps = 12/491 (2%)

Query: 76  GLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           G+  D+F ++SL+ +     + + +H   L LG     +L++  I   +  G+I  A   
Sbjct: 17  GIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE- 194
           F D        + A++ GY  N  F  +  ++  M+   +  + F+   +L A   +   
Sbjct: 76  FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135

Query: 195 --GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD--VVSWSER 250
             G  +H    ++GF + V   + N ++ LY +C +   A  +F+ +  P+  +VSW+  
Sbjct: 136 QMGRFVHAQVFRLGFDADV--FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193

Query: 251 IAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           ++A     + +EA  +F  +R  D + +   ++++L++    + L+ G+ I A   K+G 
Sbjct: 194 VSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +  +L +MY KCGQV  A+ +FD +   + + WN+MI+GY++NG+  +A+DMF  
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M+   + P+  ++ S + A +   SL+QA  ++ ++ +S +  D  + S LI  + KC +
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  ++ V      ++ V  +A+           EA+ LYR +       N  TF  +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAG 546
           C     + +G     L    + +      + VID+  + G ++ A    + +  +  +  
Sbjct: 434 CNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493

Query: 547 WNAMMMGYAQH 557
           W A++    +H
Sbjct: 494 WGALLSACKKH 504



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 8/371 (2%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           KQI A    +G      +   LI      G +  AR +FD L       WN++I GYS N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             F  AL M+ +M    + P+ +T   +L+A S    L+    VH+ + + GF  D  + 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 416 SCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + LI  Y KC  L  ++ V     + ++  V   A+ S         EALE++  +    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            + +      VL A   + DL+QG++IH   +K   + +  +  ++  MY KCG +  AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F K+   +L  WNAM+ GYA++G   E  ++F++M    V+PD I+  + +++C   G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 594 LVREARTYLSCM--SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            + +AR+    +  SD       +   + ++D+  + G +EGA++  D+  +  D  +W 
Sbjct: 338 SLEQARSMYEYVGRSDYRD---DVFISSALIDMFAKCGSVEGARLVFDRT-LDRDVVVWS 393

Query: 652 SLLSACTIYGN 662
           +++    ++G 
Sbjct: 394 AMIVGYGLHGR 404



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 16/197 (8%)

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           T   Q K IH   L        F+ + +I      G I  A++ F  + R  +  WNA++
Sbjct: 32  THKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAII 91

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GY+++  + +   +++ M    V PD  T+  +L +C  +GL     ++L     +H  
Sbjct: 92  RGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGL-----SHLQMGRFVHAQ 144

Query: 612 IPQLEHYACI------VDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYGNI- 663
           + +L   A +      + L  +   L  A+   + +P+P    + W +++SA    G   
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204

Query: 664 -DLGLLAGSKLLELQPD 679
             L + +  + ++++PD
Sbjct: 205 EALEIFSHMRKMDVKPD 221


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 206/691 (29%), Positives = 351/691 (50%), Gaps = 47/691 (6%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LKLG     +L +  I  Y K G +V A   F      D V+Y+A++  +     
Sbjct: 126 LHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNR 183

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
             ++ ++F  MR  G+E NE+S  A+L A   S +++ G Q+H   +K+G+   V   + 
Sbjct: 184 ETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLV--FVA 241

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND-F 272
           NA++ LY +CG    A+ +FDE+ + D+ SW+  I++   G+   +A  LF+ L  N  F
Sbjct: 242 NALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGF 301

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + +++T+  LL++         G++I A+  ++G    +S+ NA+I  Y +CG +N   +
Sbjct: 302 KADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAA 361

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE---------------------- 370
           +F+ +  +D ++W  MI  Y E G  + A+DMF  M E                      
Sbjct: 362 LFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKA 421

Query: 371 ----FSLIPNG-----YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
                 ++  G     +T+  ++ A      L+ + Q+H  IIK GF  +  + + LI  
Sbjct: 422 LNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDM 481

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYA--SCHAEALEL-YRTIWGSCREVNG 478
             KC  ++++ R+   +       I   + +  YA      EA+ L YR        ++ 
Sbjct: 482 CSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDE 541

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
             F+ +L  C  +   E GK IHC ALK  +  ++ V +++I MY KC  I+DA +AF  
Sbjct: 542 VAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNT 601

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS--CCHAGLVR 596
           +    +  WN ++ G   H    E   +++ M K G+KPD IT++ ++++     + L+ 
Sbjct: 602 MPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLD 661

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E R+    M  +H L P  EHYA +V +LG  GLLE A+  I++MP  P+  +W++LL  
Sbjct: 662 ECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDG 721

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C ++ N  +G      ++ ++P + STYVL+SNLYA++G W+    +R+ M+++ L K P
Sbjct: 722 CRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHP 781

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             SW+ +    H FYA D SH QS +IY  L
Sbjct: 782 CRSWVIIKKQLHTFYARDKSHPQSNDIYSGL 812



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/626 (23%), Positives = 298/626 (47%), Gaps = 63/626 (10%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L   +I+ + K      A+         D+++Y+ALIS  ++  +   A++LF R+R
Sbjct: 136 DTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMR 195

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+ P+ ++F +++ AC    E E+   VH + +KLG+S  V++ +  I  Y K G + 
Sbjct: 196 ISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLD 255

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRSLGLELNEFSLTAVLGAS 189
            A   F +    D  ++  M+   V    ++K+ E+F V  ++ G + ++F+L+ +L A 
Sbjct: 256 HAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTAC 315

Query: 190 FDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                  +G +IH + +++G  + +   ++NAI+  Y RCG       +F+ +   D+++
Sbjct: 316 ARCHARIQGREIHAYAIRIGLENNL--SVSNAIIGFYTRCGSLNHVAALFERMPVRDIIT 373

Query: 247 WSERIAA---------ACD-------------------------GVEAFGLFKDLRFNDF 272
           W+E I A         A D                         G++A  LF  +     
Sbjct: 374 WTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGA 433

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           ++ ++T+  ++++ G    L   +QI  F  K GF     I  ALI M  KCG+++DA  
Sbjct: 434 ELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADR 493

Query: 333 IFDYLIFK--DSVSWNSMIAGYSENGFFNQALDMF--CHMLEFSLIPNGYTMASILEAVS 388
           +F  L     +S+   SMI GY+ NG   +A+ +F  C   E +++ +     SIL    
Sbjct: 494 MFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQS-EGTMVLDEVAFTSILGVCG 552

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
                +   Q+H   +K+GF  +  + + +I+ Y KC  ++++ +  + +   + V  N 
Sbjct: 553 TLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNG 612

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD--LEQGKAIHCLALK 506
           L +  +      EAL ++ ++  +  + +  TF +++ A    +   L++ +++  L++K
Sbjct: 613 LIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLF-LSMK 671

Query: 507 ARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDS-LAGWNAMMMGYAQHGC-YHE 562
             +D +   E  ++++ +    G +E+A+    K+  D  ++ W A++      GC  H 
Sbjct: 672 MIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALL-----DGCRLHA 726

Query: 563 VSNLFNKMSK--FGVKP-DEITYLAV 585
            +++  +++K   G++P D  TY+ V
Sbjct: 727 NTSIGKRVAKHIIGMEPRDPSTYVLV 752



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 159/641 (24%), Positives = 277/641 (43%), Gaps = 100/641 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L IK G+     ++  LI  + K      A     +   RDI ++N +IS L +  
Sbjct: 224 QVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGL 283

Query: 61  QSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYL 115
               AL+LF  L + +G + D FT S+L+ AC      +Q  EI H   +++G  + + +
Sbjct: 284 SYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREI-HAYAIRIGLENNLSV 342

Query: 116 VSGFIENYAKSG---------------------EIVSAEM----------CFRDCLDLDN 144
            +  I  Y + G                     E+++A M           F    + ++
Sbjct: 343 SNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNS 402

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGF 201
           V+Y A++ G+  N E  K+  +FV M   G EL +F+LT V+ A      ++   QIHGF
Sbjct: 403 VSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGF 462

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP---DVVSWSERIAAACDGV 258
            +K GF S  C  +  A++++  +CG+  DA +MF  ++      ++  S     A +G+
Sbjct: 463 IIKFGFRSNAC--IEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGL 520

Query: 259 --EAFGLFKDLRFNDFQI-NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
             EA  LF   +     + +E    ++L   G       GKQI     K GF   + +GN
Sbjct: 521 PEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGN 580

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ++ISMY KC  ++DA   F+ +   D VSWN +IAG   +   ++AL ++  M +  + P
Sbjct: 581 SIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKP 640

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +  T   I+ A               +   S  LLD+            C +L  S +++
Sbjct: 641 DAITFVLIVSA---------------YKFTSSNLLDE------------CRSLFLSMKMI 673

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            +++  +  H  +L  VL Y     EA EL   +     +   S +  +L  C    +  
Sbjct: 674 HDLEPTSE-HYASLVGVLGYWGLLEEAEELINKM---PFDPEVSVWRALLDGCRLHANTS 729

Query: 496 QGKAI--HCLALKARYDQDIFVESAVIDMYCKCGTIEDAK--------RAFRK-ICRDSL 544
            GK +  H + ++ R D   +V   V ++Y   G    ++        R  RK  CR  +
Sbjct: 730 IGKRVAKHIIGMEPR-DPSTYV--LVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWV 786

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFN-------KMSKFGVKPD 578
                +   YA+   + + +++++       K  K G +PD
Sbjct: 787 IIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPD 827


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 214/688 (31%), Positives = 350/688 (50%), Gaps = 27/688 (3%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRV-YLVSGFIENYAKSGEIVSAEMCFRD 138
           D+     LV+ C S+   +++H         SR  YL S  +  Y + G + SA   F  
Sbjct: 28  DSAAAVRLVRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHK 87

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEG 195
                 V +T ++  YV  G    +  +F  +   G+ L+     +VL A      +  G
Sbjct: 88  IAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAG 147

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIAAA 254
             IH   V+ G   G+   + +A++++Y RCG   DA  +F  +    DVV W+  I A 
Sbjct: 148 RLIHRCAVEAGL--GLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITAN 205

Query: 255 CDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF--CY-KVGFM 308
                  EA  +F  +       +  T +++  +      LRA  Q++ F  C  + G  
Sbjct: 206 SQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRA-SQVKGFHACLDETGLG 264

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +  AL++ Y +CG+++ AR  F  +  +++VSW SMIA +++ G    A++ F  M
Sbjct: 265 SDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHL-LAVETFHAM 323

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L   ++P   T +++  A+   + L+ A  V +   + G + D ++++ L+  Y +C+  
Sbjct: 324 LLEGVVP---TRSTLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQ 380

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV---- 484
            ++ RV S  ++         A + VYA C          +WG+  E   S   I+    
Sbjct: 381 EDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTF--KLWGAAIERGISPDRILYITA 438

Query: 485 LKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRD 542
           L ACA++  L +G+ IH C+A   R D+D+ + +A++ MY +CG++ DA+ AF  +  RD
Sbjct: 439 LDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARD 498

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            ++ WNAM+   AQHG   +  +LF  M + G   + I +L +L++C HAGLV+    + 
Sbjct: 499 EIS-WNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHF 557

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           S M+  HG++P  EHY C+VDLLGR G L  A   +  MP+PPDA  W +L+ AC IYG+
Sbjct: 558 SAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGD 617

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            + G  A  ++LEL+ D+ + YV L N+Y++AG W+D   +RK M +  L K PG S I 
Sbjct: 618 TERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIE 677

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +    H F   D SH QS+ IY EL ++
Sbjct: 678 IRSKVHEFVVRDRSHPQSEAIYAELERV 705



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 212/493 (43%), Gaps = 25/493 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+++L+  + +      A        ++ I+ +  LIS       S  A+ LF R+ 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 74  YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+  DA  F S++ AC S   L    ++H   ++ G   +  + S  +  Y + G + 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 131 SAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA- 188
            A   F      LD V + AM+     NG   ++ E+F  M  LG+  +  +  +V  A 
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 189 -SFDVKEGEQIHGFGV---KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
            S       Q+ GF     + G  S V   +  A++N Y RCG+   A K F E+ E + 
Sbjct: 241 SSSPSLRASQVKGFHACLDETGLGSDVV--VATALVNAYARCGEIDCARKFFAEMPERNA 298

Query: 245 VSWSERIAA--ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           VSW+  IAA      + A   F  +          T   L +++ G   LR  + ++A  
Sbjct: 299 VSWTSMIAAFTQIGHLLAVETFHAMLLEGVVPTRST---LFAALEGCEDLRVARLVEAIA 355

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN-----SMIAGYSENGF 357
            ++G +  V+I   L+  Y +C    DA  +F     ++   W+     +MIA Y++   
Sbjct: 356 QEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDAALVTAMIAVYAQCRD 412

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMIS 416
                 ++   +E  + P+     + L+A ++  +L +  Q+H+ +     L  D ++ +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            +++ YG+C +L +++     +  ++ +  NA+ S         +  +L+R +     + 
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDA 532

Query: 477 NGSTFSIVLKACA 489
               F  +L ACA
Sbjct: 533 ERIAFLNLLSACA 545


>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 201/681 (29%), Positives = 358/681 (52%), Gaps = 26/681 (3%)

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D  T    +KAC G L+    +HG     GF+S V + +  +  Y K+G   +A   F +
Sbjct: 2   DEVTLCLALKACRGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFEN 61

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEG 195
            +D D V++  ++ G+  N     +    V M+S G+  + F+ +  L     S   + G
Sbjct: 62  LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLG 118

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
            Q+    VK G  S +   + N+ + +Y R G    A ++FDE+   D++SW+  ++   
Sbjct: 119 LQLQSTVVKSGLESDLV--VGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLS 176

Query: 256 D----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                G EA  +F+D+     +++  +  +++++   E  L+  +QI   C K G+  ++
Sbjct: 177 QEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 236

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            +GN L+S Y KCG +   +S+F  +  ++ VSW +MI+   ++     A+ +F +M   
Sbjct: 237 EVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISSNRDD-----AVSIFLNMRLD 291

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + PN  T   +L AV  ++ +K+ +++H   IK+GF+ + S+ +  IT Y K  AL ++
Sbjct: 292 GVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDA 351

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           K+   +I  +  +  NA+ S         EAL+++ +        N  TF  VL A A  
Sbjct: 352 KKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETMP-NEYTFGSVLNAIAFA 410

Query: 492 TDL--EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            D+  + G+  H   LK   +    V SA++DMY K G I ++++ F ++ + +   W +
Sbjct: 411 EDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTS 470

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++  Y+ HG ++ V NLF++M K  V PD +T+L+VLT+C   G+V +    L+ M + +
Sbjct: 471 IISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDY 530

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
            L P  EHY+C+VD+LGR G L+ A+  + ++P  P   + QS+L +C ++GN+ +G   
Sbjct: 531 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV 590

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT-- 727
               +E++P+   +YV + N+YA    W+   ++RK M++K + KE G+SWI VG     
Sbjct: 591 AELAMEMKPELSGSYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGS 650

Query: 728 ---HHFYAGDSSHSQSKEIYK 745
                F +GD SH +S EIY+
Sbjct: 651 LTMQGFSSGDKSHPKSDEIYR 671



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 149/538 (27%), Positives = 282/538 (52%), Gaps = 28/538 (5%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           +S  ++  + K   F  A     +  + D++++N ++SG   F  +  AL    R++  G
Sbjct: 38  VSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSG---FDDNQIALNFVVRMKSAG 94

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +  DAFT+S+ +  C   +   +   +    +K G  S + + + FI  Y++SG    A 
Sbjct: 95  VVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGAR 154

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGLELNEFSLTAVLGA---S 189
             F +    D +++ +++ G    G F  ++  +F +M   G+EL+  S T+V+      
Sbjct: 155 RVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHE 214

Query: 190 FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-MFDEITEPDVVSWS 248
            D+K   QIHG  +K G+ S +   + N +M+ Y +CG  L+AVK +F +++E +VVSW+
Sbjct: 215 TDLKLARQIHGLCIKRGYESLL--EVGNILMSRYSKCGV-LEAVKSVFYQMSERNVVSWT 271

Query: 249 ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
             I++  D  +A  +F ++R +    NE T + LL++V     ++ G +I   C K GF+
Sbjct: 272 TMISSNRD--DAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFV 329

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
              S+GN+ I+MY K   + DA+  FD + F++ +SWN+MI+G+++NGF ++AL MF   
Sbjct: 330 SEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSA 389

Query: 369 LEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
              ++ PN YT  S+L A++ ++  S+K   + H+H++K G      + S L+  Y K  
Sbjct: 390 TAETM-PNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRG 448

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSI 483
            +NES++V +E+ ++N        S++   S H +    + L+  +       +  TF  
Sbjct: 449 NINESEKVFNEMSQRNQF---VWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLS 505

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI 539
           VL AC     +++G  I  + ++  Y+ +   E  S ++DM  + G +++A+    ++
Sbjct: 506 VLTACNRKGMVDKGHEILNMMIE-DYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 562



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 242/452 (53%), Gaps = 23/452 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ S ++K+G   D ++  + I+ +++   FR A R   +   +D+I++N+L+SGL++  
Sbjct: 120 QLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEG 179

Query: 61  QSG-PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
             G  A+ +F  +  +G+  D  +F+S++  C     L+    +HG+C+K G+ S + + 
Sbjct: 180 TFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 239

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y+K G + + +  F    + + V++T M+     +   D +  +F+ MR  G+ 
Sbjct: 240 NILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMI-----SSNRDDAVSIFLNMRLDGVY 294

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NE +   +L A   +  +KEG +IHG  +K GF+S     + N+ + +Y +     DA 
Sbjct: 295 PNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPS--VGNSFITMYAKFEALEDAK 352

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG-GE 289
           K FD+IT  +++SW+  I+  A +G   EA  +F          NEYT  ++L+++   E
Sbjct: 353 KAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETMP-NEYTFGSVLNAIAFAE 411

Query: 290 RI-LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            I ++ G++  A   K+G      + +AL+ MY K G +N++  +F+ +  ++   W S+
Sbjct: 412 DISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSI 471

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ YS +G FN  +++F  M++ ++ P+  T  S+L A +    + +  ++ + +I+  +
Sbjct: 472 ISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIED-Y 530

Query: 409 LLDDS--MISCLITTYGKCNALNESKRVLSEI 438
            L+ S    SC++   G+   L E++ ++SE+
Sbjct: 531 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 562


>gi|297611068|ref|NP_001065556.2| Os11g0109800 [Oryza sativa Japonica Group]
 gi|77548352|gb|ABA91149.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125533131|gb|EAY79679.1| hypothetical protein OsI_34825 [Oryza sativa Indica Group]
 gi|125575946|gb|EAZ17168.1| hypothetical protein OsJ_32674 [Oryza sativa Japonica Group]
 gi|255679705|dbj|BAF27401.2| Os11g0109800 [Oryza sativa Japonica Group]
          Length = 748

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 213/724 (29%), Positives = 357/724 (49%), Gaps = 30/724 (4%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL--KLFDRLRYQGLR 78
           L+ ++ +      A +   +   R+++++ A++S  A      P L  + F  +   G  
Sbjct: 30  LLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVS--ASTGNGAPHLGFRFFVSMIRSGFC 87

Query: 79  PDAFTFSSLVKACGSL---QENEIV-----HGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           P+ F+ ++++ AC S+     N+++     HGV ++ G  S  ++ S  +  YAK G I 
Sbjct: 88  PNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIA 147

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS-LTAVLGAS 189
           +A+  F    + D   + AM+ GYV NG    +    + M   GL  + ++ ++AV   S
Sbjct: 148 AAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDRYTYISAVKACS 207

Query: 190 FDVKE--GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
              +   G Q+H   +     S     + N+++++Y R  QK  A  +F +I + D VSW
Sbjct: 208 ISAQWDLGRQLHCLVIHSMLESNTS--VMNSLVDMYFRARQKETAASVFRKIRQKDTVSW 265

Query: 248 SERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I+      D    FG   D+     + NE T   LL   G +     G QI A  Y+
Sbjct: 266 NTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLGLQIVALAYR 325

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            G+ + V + NA+I+M  +CG +N A   F  L   + V+WN MIAGY       + + +
Sbjct: 326 HGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMKL 385

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF----LLDDSMISCLIT 420
           F  ++ F   P+ +T +++L A   ++  +   Q+H+ I+K GF     +  S+I   + 
Sbjct: 386 FRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQFVSTSLIKANVA 445

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGS 479
            +G   ++  S +++ +  K   V    + S  +    + E + L+    G S  + +  
Sbjct: 446 AFG---SVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDSTNKPDEF 502

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             + VL ACA    +   + IH L LK  + +   V SAV+D Y KCG I  A+ AF  +
Sbjct: 503 ILATVLNACANAALIRHCRCIHSLVLKTGHSKHFCVASAVVDAYAKCGEITSAESAFTVV 562

Query: 540 CR--DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
               D    +N M+  YA HG  HE  NL+ +M+K  + P   T++A+L++C H GLV +
Sbjct: 563 SSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATFVAILSACSHLGLVEQ 622

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            +   S M   +G+ P   +YAC+VDLL R GLL+ AK  ID MP  P   +W+SL+  C
Sbjct: 623 GKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVIGC 682

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+GN  LG+LA  ++L + P ++  Y+ LSN+YA  G W    + R+ M +  + K  G
Sbjct: 683 RIHGNKQLGVLAAEQILRMAPSSDGAYISLSNVYADDGEWQSAEETRRRMVQNHVQKLQG 742

Query: 718 YSWI 721
           YS I
Sbjct: 743 YSRI 746



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/575 (22%), Positives = 262/575 (45%), Gaps = 23/575 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ + ++ G   +P + ++L+  + K      A R     +N+D+  +NA++ G      
Sbjct: 117 LHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGF 176

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A++    + + GL PD +T+ S VKAC    + ++   +H + +     S   +++ 
Sbjct: 177 GHHAIRTVLLMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNS 236

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGL 175
            ++ Y ++ +  +A   FR     D V++  M+ G+  +   +  K VF   ++M  +G 
Sbjct: 237 LVDMYFRARQKETAASVFRKIRQKDTVSWNTMISGFAHD---EDDKAVFGCLIDMSRIGC 293

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + NE + + +L   GA  +   G QI     + G+   V   + NA++N+  RCG    A
Sbjct: 294 KPNEVTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNVL--VANAVINMLSRCGLLNRA 351

Query: 233 VKMFDEITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F  +T  ++V+W+E IA         E   LF+ L     + +E+T   +LS+    
Sbjct: 352 YGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEA 411

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALI-SMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
           +  R  +QI A   K GF     +  +LI +     G V  +  I +     + VSW  +
Sbjct: 412 QGARDHEQIHATILKQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVV 471

Query: 349 IAGYSENGFFNQALDMF-CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           I+ + ++G  ++ + +F     + +  P+ + +A++L A +N+  ++    +HS ++K+G
Sbjct: 472 ISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG 531

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALEL 465
                 + S ++  Y KC  +  ++   + +     +A+  N + +         EAL L
Sbjct: 532 HSKHFCVASAVVDAYAKCGEITSAESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNL 591

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYC 524
           Y  +  +      +TF  +L AC+ +  +EQGK +    L A          A ++D+  
Sbjct: 592 YEEMTKAKLSPTPATFVAILSACSHLGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLA 651

Query: 525 KCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           + G +++AK     +  +   A W ++++G   HG
Sbjct: 652 RKGLLDEAKGVIDAMPFQPWPAVWRSLVIGCRIHG 686



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 135/605 (22%), Positives = 243/605 (40%), Gaps = 31/605 (5%)

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           KLG  +  + ++  +  YA+ G + SA   F +    + V++TAMV     NG       
Sbjct: 17  KLGTLAHTFNMNHLLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFR 76

Query: 166 VFVEMRSLGLELNEFSLTAVLGA--------SFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
            FV M   G   NEFSL  +L A        S  +     +HG  V+ G  S     + +
Sbjct: 77  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSN--PFVGS 134

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQI 274
           +++ +Y + G+   A + F  I   D+  W+  +        G  A      +  +    
Sbjct: 135 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAP 194

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + YT I+ + +         G+Q+             S+ N+L+ MY +  Q   A S+F
Sbjct: 195 DRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVF 254

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             +  KD+VSWN+MI+G++ +            M      PN  T + +L      ++  
Sbjct: 255 RKIRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENES 314

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +Q+ +   + G+  +  + + +I    +C  LN +      +   N V  N + +   
Sbjct: 315 LGLQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYG 374

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
             S   E ++L+R++       +  T+S VL A          + IH   LK  +    F
Sbjct: 375 LFSHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQF 434

Query: 515 VESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           V +++I       G+++ + +      +  L  W  ++  + +HG   EV  LFN     
Sbjct: 435 VSTSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGD 494

Query: 574 GV-KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIVDLLG 626
              KPDE     VL +C +A L+R  R        +H L+ +  H       + +VD   
Sbjct: 495 STNKPDEFILATVLNACANAALIRHCRC-------IHSLVLKTGHSKHFCVASAVVDAYA 547

Query: 627 RVGLLEGAKMTIDQMPI-PPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNEST 683
           + G +  A+     +     DA ++ ++L+A   +G I   L L       +L P   + 
Sbjct: 548 KCGEITSAESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATF 607

Query: 684 YVLLS 688
             +LS
Sbjct: 608 VAILS 612



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 172/366 (46%), Gaps = 17/366 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI +L  ++G+  + +++  +I+  ++     RA+ F     + +I+T+N +I+G   F 
Sbjct: 318 QIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLFS 377

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
            S   +KLF  L   G RPD FT+S+++ A    Q   ++E +H   LK GF+S  ++ +
Sbjct: 378 HSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQFVST 437

Query: 118 GFIE-NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL- 175
             I+ N A  G +  +     D   ++ V++  ++  ++ +G  D+   +F   R     
Sbjct: 438 SLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDSTN 497

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +EF L  VL A  +   ++    IH   +K G     C  + +A+++ Y +CG+   A
Sbjct: 498 KPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSKHFC--VASAVVDAYAKCGEITSA 555

Query: 233 VKMFDEITE--PDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
              F  ++    D + ++  + A A  G+  EA  L++++          T + +LS+  
Sbjct: 556 ESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATFVAILSACS 615

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFKD-SVSW 345
              ++  GK + +       M       A L+ +  + G +++A+ + D + F+     W
Sbjct: 616 HLGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVW 675

Query: 346 NSMIAG 351
            S++ G
Sbjct: 676 RSLVIG 681


>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Brachypodium distachyon]
          Length = 689

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 198/635 (31%), Positives = 333/635 (52%), Gaps = 15/635 (2%)

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + +A   F +    D  ++ +++  +V  G    +  +   M + G+  N F+L + L +
Sbjct: 41  LAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRS 100

Query: 189 SFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
           +   +    G Q+     K G    V     +A++++Y +CG+  DA ++FD + E + V
Sbjct: 101 AAAARCPALGAQLQSLAFKSGLADNV--FAASALLHMYAKCGRVRDARRVFDGMPERNTV 158

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+  IA   +    ++A  LF ++       +E T   LL++           Q+    
Sbjct: 159 SWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDSNYFLM-HQLHGKI 217

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQA 361
            K G    +++ NA I+ Y +CG + ++R IFD +   +D +SWN+M+  Y+ +G    A
Sbjct: 218 VKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDA 277

Query: 362 LDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           +  F  M+  S +  + Y+  SI+          Q   +H  +IK+G      + + LI 
Sbjct: 278 MGFFVRMIRESGVQLDMYSFTSIISTCPEHDD-HQGRAIHGLVIKNGLEGATPVCNALIA 336

Query: 421 TYGKCNA---LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
            Y + +    + ++ +    +  K+ V  N++ +     +  A+AL  +R +  +    +
Sbjct: 337 MYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCD 396

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
              FS  L++C+ +  L+ G+ IH   + + +  + FV S++I MY K G ++DAK++F 
Sbjct: 397 EYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFE 456

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +  + S   WN+M+ GYAQHG  H V +LFN+M +  V  D +T++ ++TSC HAGLV E
Sbjct: 457 EADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDE 516

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
               L+ M   +G+  ++EHYAC VDL GR G LE AK  ID MP  PDA +W +LL AC
Sbjct: 517 GSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGAC 576

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+GN++L     S LL  +P   STY+LLS++Y+  GMW+D   +++EMK + L K PG
Sbjct: 577 RIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPG 636

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           +SWI V    H F A D SH +  EIY+ L  L +
Sbjct: 637 WSWIEVKNEVHSFNAEDRSHPRMDEIYEMLSLLLQ 671



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 258/520 (49%), Gaps = 28/520 (5%)

Query: 34  AFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
           A R +FD   R D  ++N+L++          A  L   +  QG+  + F   S +++  
Sbjct: 43  AARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAA 102

Query: 93  SLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
           + +   +   +  +  K G +  V+  S  +  YAK G +  A   F    + + V++ A
Sbjct: 103 AARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNA 162

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVG 206
           ++ GYV +G+  ++ E+F+ M +  L  +E +  A+L A FD        Q+HG  VK G
Sbjct: 163 LIAGYVESGKVLQALELFINMETERLVPDEATFAALLTA-FDDSNYFLMHQLHGKIVKYG 221

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIAA-ACDGV--EAFG 262
              G+   ++NA +  Y +CG   ++ ++FD+I +  D++SW+  + A    G+  +A G
Sbjct: 222 SALGLT--VSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMG 279

Query: 263 LF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            F + +R +  Q++ Y+  +++S+   E     G+ I     K G      + NALI+MY
Sbjct: 280 FFVRMIRESGVQLDMYSFTSIISTC-PEHDDHQGRAIHGLVIKNGLEGATPVCNALIAMY 338

Query: 322 ----GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
               G C  + DA   FD L+ KD+VSWNSM+ GYS++     AL  F  M   ++  + 
Sbjct: 339 TRISGNC-MMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDE 397

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           Y  ++ L + S    L+   Q+H  II SGF  ++ + S LI  Y K   L+++K+   E
Sbjct: 398 YAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEE 457

Query: 438 IDKKNAVHINALASVLVYAS-CHAEALE-LYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            DK ++V  N++  +  YA   HA  +  L+  +      ++  TF  ++ +C+    ++
Sbjct: 458 ADKGSSVPWNSM--IFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVD 515

Query: 496 QGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
           +G  I   A++ RY   + +E  +  +D+Y + G +E AK
Sbjct: 516 EGSEI-LNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAK 554



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 211/453 (46%), Gaps = 19/453 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ SL  K+G   +   ++ L+  + K    R A R       R+ +++NALI+G     
Sbjct: 112 QLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESG 171

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--NEIVHGVCLKLGFSSRVYLVSG 118
           +   AL+LF  +  + L PD  TF++L+ A           +HG  +K G +  + + + 
Sbjct: 172 KVLQALELFINMETERLVPDEATFAALLTAFDDSNYFLMHQLHGKIVKYGSALGLTVSNA 231

Query: 119 FIENYAKSGEIVSAEMCFRDCLD-LDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLE 176
            I  Y++ G +  +   F    D  D +++ AM+  Y ++G    +   FV M R  G++
Sbjct: 232 AITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQ 291

Query: 177 LNEFSLTAVLG--ASFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRCGQKL-- 230
           L+ +S T+++      D  +G  IHG  +K G    + VC    NA++ +Y R       
Sbjct: 292 LDMYSFTSIISTCPEHDDHQGRAIHGLVIKNGLEGATPVC----NALIAMYTRISGNCMM 347

Query: 231 -DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA K FD +   D VSW+  +          +A   F+ ++  + + +EY     L S 
Sbjct: 348 EDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSC 407

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               +L+ G+QI       GF     + ++LI MY K G ++DA+  F+      SV WN
Sbjct: 408 SELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWN 467

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IK 405
           SMI GY+++G  +    +F  M+E  +  +  T   ++ + S++  + +  ++ + +  +
Sbjct: 468 SMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETR 527

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            G  L     +C +  YG+   L ++K ++  +
Sbjct: 528 YGIPLRMEHYACGVDLYGRAGQLEKAKELIDSM 560


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 207/735 (28%), Positives = 379/735 (51%), Gaps = 28/735 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+Y    K+G   +  + T ++    K    R A R   D      + +NA +SG  R  
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           + G A+++F  + +    P++FT+S  + AC + +E  +   VHG+ L+      V++ +
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G++ +A   F      + V++T  + G+V + E   +  +  EM   G+ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N+++ T++L A      V+E  QIHG  +K   +L  V   +  A+++ Y   G    + 
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCV---VKEALISTYTNFGFIELSE 326

Query: 234 KMFDEI-TEPDVVSWSERIAAACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+F+E  T  +   WS  I+   +   + +  L + +     + N+    ++ SSV    
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS-- 384

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  G Q+ +   K GF+  + +G+AL +MY +C  V D+  +F+ +  +D VSW +M+A
Sbjct: 385 -IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVA 443

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK----S 406
           G++ +G   +A   F +M+     P+  ++ +IL A + S+ L +  +VH H ++    +
Sbjct: 444 GFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGET 503

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            F+ D     C I+ Y KC  +  ++R+      K+ V  +++ S      C  EA+ L+
Sbjct: 504 TFIND-----CFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLF 558

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           + +  +   ++    S +L  CA +      K +H  A+KA    D  V S+++ +Y + 
Sbjct: 559 QLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G ++D+++ F +I    L  W  ++ GYAQHG       +F+ M + GV+PD +  ++VL
Sbjct: 619 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 678

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C   GLV +   Y + M   +G+ P+L+HY C+VDLLGR G L  AK  +D MP+ PD
Sbjct: 679 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 738

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             +W +L++AC ++ +  LG    +K+ E   D+ S +  LSN+ A++G W +V ++RK 
Sbjct: 739 LMVWSTLVAACRVHDDTVLGRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKT 797

Query: 707 MKEKFLCKEPGYSWI 721
           MK   + KEPG+S +
Sbjct: 798 MKG--VNKEPGWSMV 810



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/611 (25%), Positives = 276/611 (45%), Gaps = 35/611 (5%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           E V+    K G S   Y+ +G ++  AKSG +  A   F D      V + A V G V N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH 214
           GE   + E+F +M     E N F+ +  L A    +E   G  +HG  ++      V   
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDV--F 206

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND 271
           +  +++N+Y +CG    A++ F  +   +VVSW+  IA      + V A  L +++  N 
Sbjct: 207 VGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNG 266

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             IN+YT  ++L +     ++R   QI     K        +  ALIS Y   G +  + 
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326

Query: 332 SIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            +F+      +   W++ I+G S +    +++ +   M    L PN    AS+  +V+  
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVN-- 383

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            S++   Q+HS  IK GF+    + S L T Y +C+ + +S +V  E+ +++ V   A+ 
Sbjct: 384 -SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 442

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +         EA   +R +     + +  + + +L AC     L +GK +H   L+  Y 
Sbjct: 443 AGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YG 501

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           +  F+    I MY KC  ++ A+R F    C+D +  W++M+ GYA +GC  E  +LF  
Sbjct: 502 ETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVM-WSSMISGYATNGCGEEAISLFQL 560

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVD 623
           M    ++ D     ++L+ C        AR +      LH      G++      + +V 
Sbjct: 561 MVAASIRIDSYICSSILSLCADI-----ARPFYC--KPLHGYAIKAGILSDQSVSSSLVK 613

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL--QPDNE 681
           +  R G ++ ++   D++ + PD   W +++     +G+    L     +++L  +PD  
Sbjct: 614 VYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPD-- 670

Query: 682 STYVLLSNLYA 692
            T VL+S L A
Sbjct: 671 -TVVLVSVLSA 680


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 199/577 (34%), Positives = 307/577 (53%), Gaps = 41/577 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAF----GLFKDLRF 269
           N +++ Y + G      ++F  +   D VSW+  I+   C G  VEA      + KD   
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           N  +I   TM+ L+SS G    +  G+QI     K GF   V +G++L+ MY K G V+ 
Sbjct: 135 NLNRITFSTMLLLVSSQG---CVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191

Query: 330 ARSIFDYL--------------------------IF-----KDSVSWNSMIAGYSENGFF 358
           A  +FD +                          +F     +DS+SW +MI G  +NG  
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +A+D+F  M +  +  + YT  S+L A    ++LK+  ++H+ II+SG+  +  + S L
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC ++  ++ V   +  KN V   A+           EA+ ++  +  +  E + 
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   V+ +CA +  LE+G   HC AL +     I V +A+I +Y KCG+IED+ + F +
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDE 431

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +       W A++ GYAQ G  +E  +LF +M   G+KPD +T++AVL++C  AGLV   
Sbjct: 432 MSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERG 491

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           + Y   M   HG+IP  +HY C++DL GR G LE AK  I++MP  PD+  W +LLS+C 
Sbjct: 492 QQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCR 551

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           +YGN ++G  A   LLEL P N + Y+LLS++YA+ G W++V +LR+ M+EK   KEPG+
Sbjct: 552 LYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGF 611

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           SWI      + F A D S   S +IY EL KL   M+
Sbjct: 612 SWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMI 648



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 259/553 (46%), Gaps = 86/553 (15%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHG 102
           N +   YN LI+  ++      A  +FD++     +P++F++++++ A            
Sbjct: 37  NPETFLYNNLINAYSKLGNITYARHVFDKMP----QPNSFSWNTMLSA------------ 80

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
                               Y+KSG++ + +  F    + D V++ +++ GYV  G   +
Sbjct: 81  --------------------YSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVE 120

Query: 163 SKEVFVEMRSLG-LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           + + +  M   G L LN  + + +L    +   V  G QIHG  VK GF  G    + ++
Sbjct: 121 AVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGF--GAYVFVGSS 178

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVV-------------------------------SW 247
           ++++Y + G    A ++FDE+ E +VV                               SW
Sbjct: 179 LVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISW 238

Query: 248 SERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I          EA  LF+D+R     +++YT  ++L++ GG R L+ GK+I     +
Sbjct: 239 TTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIR 298

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            G+   V +G+AL+ MY KC  V  A ++F  +  K+ VSW +M+ GY +NGF  +A+ +
Sbjct: 299 SGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRV 358

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           FC M    + P+ +T+ S++ + +N  SL++  Q H   + SG +   ++ + LIT YGK
Sbjct: 359 FCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGK 418

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C ++ +S ++  E+  ++ V   AL S         E ++L+  +     + +  TF  V
Sbjct: 419 CGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAV 478

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVES----AVIDMYCKCGTIEDAKRAFRKI- 539
           L AC+    +E+G+      LK   D  I   S     +ID++ + G +E+AK    K+ 
Sbjct: 479 LSACSRAGLVERGQQYFESMLK---DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMP 535

Query: 540 -CRDSLAGWNAMM 551
              DS+ GW  ++
Sbjct: 536 FSPDSI-GWATLL 547



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 232/462 (50%), Gaps = 44/462 (9%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG-L 77
            T++S ++K  D            NRD +++N+LISG   +     A+K ++ +   G L
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 78  RPDAFTFSS---LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK--------- 125
             +  TFS+   LV + G +     +HG  +K GF + V++ S  ++ YAK         
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 126 ----------------------SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                                 SG +  ++  F    + D++++T M+ G + NG   ++
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 164 KEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            ++F +MR  G+ +++++  +VL   G    +KEG++IH   ++ G+   V   + +A++
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV--FVGSALV 312

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEY 277
           ++Y +C     A  +F  +   +VVSW+  +     +G   EA  +F D++ N  + +++
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ +++SS      L  G Q        G +  +++ NALI++YGKCG + D+  +FD +
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
            F+D VSW ++++GY++ G  N+ +D+F  ML   L P+  T  ++L A S +  +++  
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492

Query: 398 QVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           Q    ++K  G +      +C+I  +G+   L E+K  ++++
Sbjct: 493 QYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKM 534



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 210/411 (51%), Gaps = 22/411 (5%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  T+I+   +    + + R     + RD I++  +I+GL +      A+ LF  +R +
Sbjct: 205 VMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQE 264

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+  D +TF S++ ACG   +L+E + +H + ++ G++  V++ S  ++ Y K   +  A
Sbjct: 265 GMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYA 324

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
           E  F+   + + V++TAM+ GY  NG  +++  VF +M+  G+E ++F+L +V+ +  + 
Sbjct: 325 EAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANL 384

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++EG Q H   +  G +S +   ++NA++ LY +CG   D+ ++FDE++  D VSW+ 
Sbjct: 385 ASLEEGAQFHCQALVSGLISFIT--VSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTA 442

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKV 305
            ++         E   LF+ +     + +  T I +LS+     ++  G+Q  ++     
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDM 364
           G +        +I ++G+ G++ +A++  + + F  DS+ W ++++     G  N+ +  
Sbjct: 503 GIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG--NEEIGK 560

Query: 365 FC--HMLEFSLI-PNGYTMASILEAV----SNSKSLKQAMQVHSHIIKSGF 408
           +    +LE     P GY + S + A     SN   L++ M+      + GF
Sbjct: 561 WAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGF 611



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 130/260 (50%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L+I++G++ +  + + L+  + K    R A        N++++++ A++ G  +  
Sbjct: 291 EIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNG 350

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A+++F  ++  G+ PD FT  S++ +C    SL+E    H   L  G  S + + +
Sbjct: 351 FSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSN 410

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G I  +   F +    D V++TA+V GY   G+ +++ ++F  M   GL+ 
Sbjct: 411 ALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKP 470

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +  AVL A      V+ G+Q     +K   +    +H    +++L+ R G+  +A  
Sbjct: 471 DAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHY-TCMIDLFGRAGRLEEAKN 529

Query: 235 MFDEIT-EPDVVSWSERIAA 253
             +++   PD + W+  +++
Sbjct: 530 FINKMPFSPDSIGWATLLSS 549



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
           K C    +  Q K +HCL +K+  + + F+ + +I+ Y K G I  A+  F K+ + +  
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS-CCHAGLVREARTYLSC 604
            WN M+  Y++ G    +  +F+ M       D +++ ++++   C+  +V   +TY S 
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMP----NRDGVSWNSLISGYVCYGSVVEAVKTYNSM 128

Query: 605 MSD 607
           M D
Sbjct: 129 MKD 131


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 333/644 (51%), Gaps = 17/644 (2%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K G +  A   F      ++V++T +V  +  NG + ++   +  M   GL  +    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 183 TAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
              +G   +S D+K+G+ +H   ++   L      L  A++ +Y RC     A K FDE+
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDII-LGTALITMYARCRDLELARKTFDEM 120

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI---LR 293
            +  +V+W+  IA      D   A  +++D+     +  +   I   S++    +   + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G++I+A     G+     + NALI+MY KCG +  AR +FD L  +D ++WN+MI+GY+
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           + G   QAL++F  M      PN  T   +L A +N + L+Q   +H  + + G+  D  
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 414 MISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           + + L+  Y KC++ L E+++V   +  ++ +  N L    V      +AL++++ +   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               N  T S VL ACA +    QGKA+H L    R   D+ +E+++++MY +CG+++D 
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
              F  I   SL  W+ ++  YAQHG        F ++ + G+  D++T ++ L++C H 
Sbjct: 421 VGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHG 480

Query: 593 GLVREA-RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           G+++E  +T+LS + D HGL P   H+ C+VDLL R G LE A+  I  MP  PDA  W 
Sbjct: 481 GMLKEGVQTFLSMVGD-HGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNE-STYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           SLLS C ++ +         KL EL+ ++E ST  LLSN+YA AG W+DV K R     +
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAAR 599

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
              K PG S+I +    H F AGD SH + + I  E+ +L + M
Sbjct: 600 ---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQM 640



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 230/462 (49%), Gaps = 26/462 (5%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYT 278
           +Y +CG   DA+ +F  I  P+ VSW+  +AA A +G   EA G ++ +     + +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYL 337
            +  +      + L+ G+ + A   +   +E  + +G ALI+MY +C  +  AR  FD +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS---LIPNGYTMASILEAVSNSKSLK 394
             K  V+WN++IAGYS NG    AL ++  M+  S   + P+  T +S L A +    + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           Q  ++ +  + SG+  D  + + LI  Y KC +L  +++V   +  ++ +  N + S   
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 +ALEL++ +  +  + N  TF  +L AC  + DLEQG+AIH    +  Y+ D+ 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 515 VESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           + + +++MY KC  ++E+A++ F ++    +  WN +++ Y Q+G   +  ++F +M   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV------DLLGR 627
            V P+EIT   VL++C   G  R+ +        +H LI      A +V      ++  R
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKA-------VHALIASGRCKADVVLENSLMNMYNR 413

Query: 628 VGLLEGAKMTIDQMPIPPDAHI--WQSLLSACTIYGNIDLGL 667
            G L+    T+       D  +  W +L++A   +G+   GL
Sbjct: 414 CGSLDD---TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 214/440 (48%), Gaps = 16/440 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
            D IL T LI+ + +  D   A +   +   + ++T+NALI+G +R      ALK++  +
Sbjct: 92  FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151

Query: 73  ---RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
                +G++PDA TFSS + AC   G + +   +    +  G++S   + +  I  Y+K 
Sbjct: 152 VSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKC 211

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G + SA   F    + D +A+  M+ GY   G   ++ E+F  M     + N  +   +L
Sbjct: 212 GSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLL 271

Query: 187 GASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEP 242
            A     D+++G  IH    + G+ S +   + N ++N+Y +C   L +A ++F+ +   
Sbjct: 272 TACTNLEDLEQGRAIHRKVREDGYESDLV--IGNVLLNMYTKCSSSLEEARQVFERMRTR 329

Query: 243 DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           DV++W+  I A        +A  +FK ++  +   NE T+ N+LS+       R GK + 
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A          V + N+L++MY +CG ++D   +F  +  K  VSW+++IA Y+++G   
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH-SHIIKSGFLLDDSMISCL 418
             L+ F  +L+  L  +  TM S L A S+   LK+ +Q   S +   G   D     C+
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCM 509

Query: 419 ITTYGKCNALNESKRVLSEI 438
           +    +   L  ++ ++ ++
Sbjct: 510 VDLLSRAGRLEAAENLIHDM 529



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 255/549 (46%), Gaps = 36/549 (6%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGV 103
           +++  +++  AR      AL  + R+  +GLRPD   F   +  C S   L++ +++H +
Sbjct: 24  VSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAM 83

Query: 104 CLK---LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
            L+   L F   + L +  I  YA+  ++  A   F +      V + A++ GY  NG+ 
Sbjct: 84  ILETRLLEFD--IILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141

Query: 161 DKSKEVFVEMRSL---GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNH 214
             + +++ +M S    G++ +  + ++ L A     D+ +G +I    V  G+ S     
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSI-- 199

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND 271
           + NA++N+Y +CG    A K+FD +   DV++W+  I   A      +A  LF+ +  ND
Sbjct: 200 VQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPND 259

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDA 330
            + N  T I LL++      L  G+ I     + G+   + IGN L++MY KC   + +A
Sbjct: 260 PKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEA 319

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R +F+ +  +D ++WN +I  Y + G    ALD+F  M   ++ PN  T++++L A +  
Sbjct: 320 RQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVL 379

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            + +Q   VH+ I       D  + + L+  Y +C +L+++  V + I  K+ V  + L 
Sbjct: 380 GAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLI 439

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI-------HCL 503
           +           LE +  +       +  T    L AC+    L++G          H L
Sbjct: 440 AAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGL 499

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYH 561
           A   R+    F+   ++D+  + G +E A+     +    D++A W +++ G   H    
Sbjct: 500 APDYRH----FL--CMVDLLSRAGRLEAAENLIHDMPFLPDAVA-WTSLLSGCKLHNDTK 552

Query: 562 EVSNLFNKM 570
             + + +K+
Sbjct: 553 RAARVADKL 561



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 195/421 (46%), Gaps = 27/421 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I +  + +G+  D I+   LI+ ++K      A +     +NRD+I +N +ISG A+  
Sbjct: 184 EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQG 243

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
            +  AL+LF R+     +P+  TF  L+ AC +L++ E    +H    + G+ S + + +
Sbjct: 244 AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGN 303

Query: 118 GFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             +  Y K S  +  A   F      D + +  ++  YV  G+   + ++F +M+   + 
Sbjct: 304 VLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVA 363

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH---LNNAIMNLYVRCGQKLDAV 233
            NE +L+ VL A   +  G +  G  V     SG C     L N++MN+Y RCG   D V
Sbjct: 364 PNEITLSNVLSACAVL--GAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTV 421

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  I +  +VSWS  IAA A  G    GL  F +L       ++ TM++ LS+     
Sbjct: 422 GVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGG 481

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGN---ALISMYGKCGQVNDARS-IFDYLIFKDSVSWN 346
           +L+ G  +Q F   VG   +         ++ +  + G++  A + I D     D+V+W 
Sbjct: 482 MLKEG--VQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 347 SMIAGYSENGFFNQALDMFCHMLEF---------SLIPNGYTMASILEAVSNSKSLKQAM 397
           S+++G   +    +A  +   + E          +L+ N Y  A   + V  +++ + A 
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAAR 599

Query: 398 Q 398
           +
Sbjct: 600 K 600


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 207/735 (28%), Positives = 379/735 (51%), Gaps = 28/735 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+Y    K+G   +  + T ++    K    R A R   D      + +NA +SG  R  
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           + G A+++F  + +    P++FT+S  + AC + +E  +   VHG+ L+      V++ +
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G++ +A   F      + V++T  + G+V + E   +  +  EM   G+ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N+++ T++L A      V+E  QIHG  +K   +L  V   +  A+++ Y   G    + 
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCV---VKEALISTYTNFGFIELSE 326

Query: 234 KMFDEI-TEPDVVSWSERIAAACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+F+E  T  +   WS  I+   +   + +  L + +     + N+    ++ SSV    
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS-- 384

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  G Q+ +   K GF+  + +G+AL +MY +C  V D+  +F+ +  +D VSW +M+A
Sbjct: 385 -IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVA 443

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK----S 406
           G++ +G   +A   F +M+     P+  ++ +IL A + S+ L +  +VH H ++    +
Sbjct: 444 GFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGET 503

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            F+ D     C I+ Y KC  +  ++R+      K+ V  +++ S      C  EA+ L+
Sbjct: 504 TFIND-----CFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLF 558

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           + +  +   ++    S +L  CA +      K +H  A+KA    D  V S+++ +Y + 
Sbjct: 559 QLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRS 618

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G ++D+++ F +I    L  W  ++ GYAQHG       +F+ M + GV+PD +  ++VL
Sbjct: 619 GNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVL 678

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C   GLV +   Y + M   +G+ P+L+HY C+VDLLGR G L  AK  +D MP+ PD
Sbjct: 679 SACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPD 738

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             +W +L++AC ++ +  LG    +K+ E   D+ S +  LSN+ A++G W +V ++RK 
Sbjct: 739 LMVWSTLVAACRVHDDTVLGRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKT 797

Query: 707 MKEKFLCKEPGYSWI 721
           MK   + KEPG+S +
Sbjct: 798 MKG--VNKEPGWSMV 810



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/611 (25%), Positives = 276/611 (45%), Gaps = 35/611 (5%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           E V+    K G S   Y+ +G ++  AKSG +  A   F D      V + A V G V N
Sbjct: 89  EQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRN 148

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH 214
           GE   + E+F +M     E N F+ +  L A    +E   G  +HG  ++      V   
Sbjct: 149 GEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDV--F 206

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND 271
           +  +++N+Y +CG    A++ F  +   +VVSW+  IA      + V A  L +++  N 
Sbjct: 207 VGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNG 266

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             IN+YT  ++L +     ++R   QI     K        +  ALIS Y   G +  + 
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326

Query: 332 SIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            +F+      +   W++ I+G S +    +++ +   M    L PN    AS+  +V+  
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVN-- 383

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            S++   Q+HS  IK GF+    + S L T Y +C+ + +S +V  E+ +++ V   A+ 
Sbjct: 384 -SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMV 442

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +         EA   +R +     + +  + + +L AC     L +GK +H   L+  Y 
Sbjct: 443 AGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YG 501

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           +  F+    I MY KC  ++ A+R F    C+D +  W++M+ GYA +GC  E  +LF  
Sbjct: 502 ETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVM-WSSMISGYATNGCGEEAISLFQL 560

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVD 623
           M    ++ D     ++L+ C        AR +      LH      G++      + +V 
Sbjct: 561 MVAASIRIDSYICSSILSLCADI-----ARPFYC--KPLHGYAIKAGILSDQSVSSSLVK 613

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL--QPDNE 681
           +  R G ++ ++   D++ + PD   W +++     +G+    L     +++L  +PD  
Sbjct: 614 VYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPD-- 670

Query: 682 STYVLLSNLYA 692
            T VL+S L A
Sbjct: 671 -TVVLVSVLSA 680


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 207/683 (30%), Positives = 349/683 (51%), Gaps = 22/683 (3%)

Query: 84  FSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG-------FIENYAKSGEIVSAE 133
           +++LV AC    SL +   VH   +    SS    ++G        I  Y +     SA 
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF--- 190
             F +    + V++ +++  +V NG    +  +F  M   G   ++F+L + + A     
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           DV  G Q+H   +K    S +   + NA++ +Y + G   D   +F+ I + D++SW   
Sbjct: 167 DVGTGRQVHAHALKSERGSDLI--VQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 224

Query: 251 IAA-ACDG--VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           IA  A  G  +EA  +F+++        NE+   +   + G       G+QI     K  
Sbjct: 225 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 284

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               + +G +L  MY +C  ++ AR  F  +   D VSWNS++  YS  G  ++AL +F 
Sbjct: 285 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 344

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M +  L P+G T+  +L A     +L     +HS+++K G   D S+ + L++ Y +C+
Sbjct: 345 EMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCS 404

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L+ +  V  EI  ++ V  N++ +     +   E L+L+  +  S   ++  + + VL 
Sbjct: 405 DLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 464

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSL 544
           A A +   E  K +H  A KA    D  + + +ID Y KCG+++DA R F  +   RD  
Sbjct: 465 ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVF 524

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
           + W+++++GYAQ G   E  +LF++M   G++P+ +T++ VLT+C   G V E   Y S 
Sbjct: 525 S-WSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSI 583

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           M   +G++P  EH +CIVDLL R G L  A   IDQMP  PD  +W++LL+A  ++ +++
Sbjct: 584 MEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDME 643

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           +G  A   +L + P + + YVLL N+YA++G WN+  +L+K M+   + K PG SW+ + 
Sbjct: 644 MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLK 703

Query: 725 GYTHHFYAGDSSHSQSKEIYKEL 747
           G    F   D SH +S+EIY  L
Sbjct: 704 GELKVFIVEDRSHPESEEIYAML 726



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 218/451 (48%), Gaps = 16/451 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K+    D I+   L++ ++K       F      +++D+I++ ++I+G A+  
Sbjct: 173 QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG 232

Query: 61  QSGPALKLFDRLRYQGL-RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
               AL++F  +  +G   P+ F F S  +AC   GS +  E +HG+ +K      +Y+ 
Sbjct: 233 FEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG 292

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
               + YA+   + SA + F      D V++ ++V  Y   G   ++  +F EMR  GL 
Sbjct: 293 CSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 352

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  ++  +L A      +  G  IH + VK+G    V   + N+++++Y RC     A+
Sbjct: 353 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS--VCNSLLSMYARCSDLSSAM 410

Query: 234 KMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            +F EI + DVV+W+  I  AC       E   LF  L  ++  ++  ++ N+LS+    
Sbjct: 411 DVFHEIKDQDVVTWNS-ILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 469

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSM 348
                 KQ+ A+ +K G ++   + N LI  Y KCG ++DA  +F+ +   +D  SW+S+
Sbjct: 470 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 529

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSG 407
           I GY++ G+  +A D+F  M    + PN  T   +L A S    + +    +S +  + G
Sbjct: 530 IVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 589

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +      SC++    +   L E+   + ++
Sbjct: 590 IVPTREHCSCIVDLLARAGKLTEAANFIDQM 620



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 263/535 (49%), Gaps = 22/535 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           + +L   LI+ + + A    A +   +   R+ +++ ++I+   +  ++G AL LF  + 
Sbjct: 85  NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G   D F   S V+AC   G +     VH   LK    S + + +  +  Y+K+G + 
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVL--- 186
              M F    D D +++ +++ G+   G   ++ +VF EM   G    NEF   +     
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRAC 264

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM-FDEITEPDVV 245
           GA    + GEQIHG  +K      +  ++  ++ ++Y RC + LD+ ++ F  I  PD+V
Sbjct: 265 GAVGSWEYGEQIHGLSIKYRLDRDL--YVGCSLSDMYARC-KNLDSARVAFYRIEAPDLV 321

Query: 246 SWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+  + A + +G+  EA  LF ++R +  + +  T+  LL +  G   L  G+ I ++ 
Sbjct: 322 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 381

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K+G    VS+ N+L+SMY +C  ++ A  +F  +  +D V+WNS++   +++    + L
Sbjct: 382 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVL 441

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITT 421
            +F  + +     +  ++ ++L A +     +   QVH++  K+G L+DD M+S  LI T
Sbjct: 442 KLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAG-LVDDRMLSNTLIDT 500

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGS 479
           Y KC +L+++ R+  EI   N    +  + ++ YA      EA +L+  +       N  
Sbjct: 501 YAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHV 559

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           TF  VL AC+ +  + +G   + + ++  Y      E  S ++D+  + G + +A
Sbjct: 560 TFIGVLTACSRVGFVNEGCYYYSI-MEPEYGIVPTREHCSCIVDLLARAGKLTEA 613



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L IK     D  +  +L   + +  +   A    +  +  D++++N++++  +   
Sbjct: 275 QIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEG 334

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  +R  GLRPD  T   L+ AC    +L    ++H   +KLG    V + +
Sbjct: 335 LLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 394

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+  ++ SA   F +  D D V + +++     +   ++  ++F  +      L
Sbjct: 395 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 454

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL  VL AS ++   E   Q+H +  K G +      L+N +++ Y +CG   DA++
Sbjct: 455 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD--RMLSNTLIDTYAKCGSLDDAMR 512

Query: 235 MFDEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F+ +    DV SWS  I          EAF LF  +R    + N  T I +L++     
Sbjct: 513 LFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVG 572

Query: 291 ILRAGKQIQAFCYKVGFME----VVSIG---NALISMYGKCGQVNDARSIFDYLIFK-DS 342
            +  G      CY    ME    +V      + ++ +  + G++ +A +  D + F+ D 
Sbjct: 573 FVNEG------CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDI 626

Query: 343 VSWNSMIAG 351
           + W +++A 
Sbjct: 627 IMWKTLLAA 635



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 33/273 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S L+K G   D  +  +L+S + + +D   A     + +++D++T+N++++  A+   
Sbjct: 377 IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH 436

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
               LKLF  L       D  + ++++ A   L   E+   VH    K G      L + 
Sbjct: 437 PEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT 496

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G +  A   F    +  +V ++++++ GY   G   ++ ++F  MRSLG+  
Sbjct: 497 LIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRP 556

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN---------------NAIMNL 222
           N  +   VL A               +VGF++  C + +               + I++L
Sbjct: 557 NHVTFIGVLTAC-------------SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDL 603

Query: 223 YVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAA 254
             R G+  +A    D++  EPD++ W   +AA+
Sbjct: 604 LARAGKLTEAANFIDQMPFEPDIIMWKTLLAAS 636


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 204/663 (30%), Positives = 342/663 (51%), Gaps = 15/663 (2%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   LK G SS     +  +  Y+ +G + +A   F +    D  ++ +++  +V  G  
Sbjct: 15  HATLLKSGASSPTPW-NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAH 72

Query: 161 DKSKEVFVEMRSLGLELNEFSL---TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
             +  +   M + GL  + F+L        A+   + G Q+  F V+ G    V     +
Sbjct: 73  RDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFP--AS 130

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQI 274
           A++++Y +CG+  DA ++FD +   ++VSW+  IA   D     EA  LF +++      
Sbjct: 131 ALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVP 190

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  T   LL+++ G R     +Q+     K G    +   NA I+ Y +C  + D+R IF
Sbjct: 191 DGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIF 250

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSK-S 392
           D +  +D +SWNSM+  Y+ +G  ++A+  F  M+  S I P+ Y+  S +   S     
Sbjct: 251 DGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCD 310

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN---ALNESKRVLSEIDKKNAVHINAL 449
            +Q   +HS +IK G      + + +I  Y +      + ++    S +  K+AV  N++
Sbjct: 311 DQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSM 370

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +   +    ++AL+ +R +       +    S  L++C+ +  L  G+ +H L +++ +
Sbjct: 371 LTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGF 430

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             + FV S++I MY KCG + DA+++F +  + S   WN+MM GYAQHG    V++LFN+
Sbjct: 431 ASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNE 490

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M    V  D +T++A++T+  H GLV E    L+ M   + +  ++EHYAC VDL GR G
Sbjct: 491 MLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAG 550

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L+ AK  I+ MP  PDA +W +LL AC I+GN++L       L   +P   STYVLLS+
Sbjct: 551 QLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSS 610

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +Y+  GMW+D   ++K M+ + L K PG+SWI V    H F A D SH +  EI+  L  
Sbjct: 611 MYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNEVHSFNADDRSHPRMVEIFDMLRM 670

Query: 750 LYE 752
           L +
Sbjct: 671 LLQ 673



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 275/556 (49%), Gaps = 39/556 (7%)

Query: 3   YSLLIKNGHHLDPILSTTLISHF--TKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++ L+K+G    P     L++ +  T  A  RR F    +  + D  ++N+L++      
Sbjct: 15  HATLLKSGAS-SPTPWNQLLTAYSATGLAAARRVFD---EIPHPDAASWNSLLAAHVAAG 70

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A +L   +  +GL    F   S +++  + +  E+   +    ++ G +  V+  S
Sbjct: 71  AHRDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPAS 130

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             ++ YAK G +  A   F D + + N V++ A++ GY  + +  ++ E+F+EM+ +G  
Sbjct: 131 ALLDVYAKCGRLGDARRVF-DGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVG-S 188

Query: 177 LNEFSLTAVLGASFDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + + +  AVL A+           Q+HG  VK G   G+     NA +  Y +C    D+
Sbjct: 189 VPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVAL--NAAITAYSQCDALADS 246

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF-KDLRFNDFQINEYTM---INLLSS 285
            K+FD I   D++SW+  + A A  G+  EA   F + +R +  Q + Y+    I++ S 
Sbjct: 247 RKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSE 306

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ---VNDARSIFDYLIFKDS 342
            G +   + G+ I +   K G   V  + NA+I+MY +      + DA + F  L+FKD+
Sbjct: 307 HGCDD--QQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDA 364

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWNSM+ GYS +G  + AL  F  M   ++  + + +++ L + S+   L+   QVHS 
Sbjct: 365 VSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSL 424

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           +++SGF  +D + S LI  Y KC  L ++++   E DK ++V  N++  +  YA  H +A
Sbjct: 425 VVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSM--MFGYAQ-HGQA 481

Query: 463 ---LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--S 517
               +L+  +      ++  TF  ++ A +    +++G  I    ++ RY   + +E  +
Sbjct: 482 QTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEI-LNTMETRYKIPMRMEHYA 540

Query: 518 AVIDMYCKCGTIEDAK 533
             +D+Y + G ++ AK
Sbjct: 541 CGVDLYGRAGQLDKAK 556



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 204/430 (47%), Gaps = 26/430 (6%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           +  D RR F  +     R+I+++NA+I+G     +   A++LF  ++  G  PD  TF+ 
Sbjct: 141 RLGDARRVFDGM---PVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAV 197

Query: 87  LVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           L+      +   +   +HG  +K G +  +  ++  I  Y++   +  +   F      D
Sbjct: 198 LLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRD 257

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVE-MRSLGLELNEFSLTAVLGA----SFDVKEGEQI 198
            +++ +M+  Y ++G  D++   FV  MR  G++ + +S T+ +        D ++G  I
Sbjct: 258 LISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSI 317

Query: 199 HGFGVKVGF--LSGVCNHLNNAIMNLYVRCGQKL---DAVKMFDEITEPDVVSWSERIAA 253
           H   +K G   ++ VC    NA++ +Y R        DA   F  +   D VSW+  +  
Sbjct: 318 HSLVIKFGLEGVTPVC----NAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTG 373

Query: 254 ACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   +A   F+ +R  + + +E+ +   L S     +LR G+Q+ +   + GF   
Sbjct: 374 YSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASN 433

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             + ++LI MY KCG + DAR  F+      SV WNSM+ GY+++G      D+F  ML+
Sbjct: 434 DFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLD 493

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNAL 428
             +  +  T  +++ A S+   + +  ++  + +++ + +   M   +C +  YG+   L
Sbjct: 494 LEVPLDHVTFVALITAYSHGGLVDEGSEI-LNTMETRYKIPMRMEHYACGVDLYGRAGQL 552

Query: 429 NESKRVLSEI 438
           +++K ++  +
Sbjct: 553 DKAKELIESM 562



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 21/261 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFAD---FRRAFRFLFDTQNRDIITYNALISGLAR 58
           I+SL+IK G      +   +I+ +T+FAD      A+        +D +++N++++G + 
Sbjct: 317 IHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSH 376

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYL 115
              S  ALK F  +R + +R D F  S+ +++C  L   +    VH + ++ GF+S  ++
Sbjct: 377 HGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFV 436

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  I  Y+K G +  A   F +     +V + +M+ GY  +G+     ++F EM  L +
Sbjct: 437 SSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEV 496

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHG-----FGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            L+  +  A++ A      V EG +I       + + +      C       ++LY R G
Sbjct: 497 PLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACG------VDLYGRAG 550

Query: 228 QKLDAVKMFDEIT-EPDVVSW 247
           Q   A ++ + +  +PD + W
Sbjct: 551 QLDKAKELIESMPFQPDAIVW 571


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 213/721 (29%), Positives = 370/721 (51%), Gaps = 51/721 (7%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQ---ENEI 99
             +I  N L++ L R   +  +++LF ++     L+PD FT SS + AC +L+       
Sbjct: 15  EQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQ 74

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC------- 152
           +H   ++ G  +  ++ +  +  YAKS ++VS +  F +  + D  ++T ++        
Sbjct: 75  LHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQ 134

Query: 153 -GY--------------VWNGEF-----DKSKEV----FVEMRSLGLELNEFSLTAVLG- 187
            GY              VWN        +K  E+    F EM  LG+  ++++  +VL  
Sbjct: 135 IGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSL 194

Query: 188 ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI--TEPDV 244
            S ++ + G ++H   +K GFL  V   + NA++ +Y   G+  DA ++F+E   T  D 
Sbjct: 195 CSLELLDFGREVHTLVIKTGFL--VRASVINALLTMYFNSGKVADAYEVFEEAESTVHDD 252

Query: 245 VSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           ++++  I   A+     EA  +FK+++    +  E T ++++SS    R+     Q+ A 
Sbjct: 253 ITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARV---SHQVHAQ 309

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K+GF     + NA ++MY  CG ++    +FD L  KD +SWN +I  Y++  F+  A
Sbjct: 310 AIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLA 369

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +  F  M    + P+ +T+ S+L   ++S+SL+      + + K+G      + + L++ 
Sbjct: 370 ILAFLQMQRAGIEPDEFTIGSLL---ASSESLEIVKMFQALVSKNGLNSKIEVSNALVSA 426

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           + K   + ++ +V + +   N +  N + S  ++     + LE +  +  S  + N  T 
Sbjct: 427 FSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTL 486

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           SIVL  CA+++ L  GK IH   L++       + +A+I MY KCG ++ + R F  +  
Sbjct: 487 SIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNG 546

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREART 600
             +  WNAM+  YAQHG   E  + F  M    GVKPD+ T+ AVL++C HAGLV +   
Sbjct: 547 RDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTR 606

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
             + M + +G  P  +H +CIVDLLGR G LE A+  I+   +   + IW +L SAC  +
Sbjct: 607 IFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAH 666

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           GN+ LG +    LLE++ ++ + YVLLSN+YA+AG W +    R  M++  + K+PG SW
Sbjct: 667 GNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSW 726

Query: 721 I 721
           I
Sbjct: 727 I 727



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 262/526 (49%), Gaps = 16/526 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           TTL+S  TK      A      T     + +NA+I+G A    +  AL LF  +   G+R
Sbjct: 123 TTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVR 182

Query: 79  PDAFTFSSLVKACG--SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
            D +TF+S++  C    L     VH + +K GF  R  +++  +  Y  SG++  A   F
Sbjct: 183 HDKYTFASVLSLCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVF 242

Query: 137 RDCLDL--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            +      D++ +  M+ G    G  +++  +F EM+   L   E +  +V+ +    + 
Sbjct: 243 EEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARV 302

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM-FDEITEPDVVSWSERIAA 253
             Q+H   +K+GF +  C  ++NA M +Y  CG  L AV M FD + E D++SW+  I  
Sbjct: 303 SHQVHAQAIKMGFEA--CTPVSNAAMTMYSSCG-NLHAVHMVFDRLEEKDLISWNIIIMN 359

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
              G     A   F  ++    + +E+T+ +LL+S     I+   K  QA   K G    
Sbjct: 360 YAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV---KMFQALVSKNGLNSK 416

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + + NAL+S + K GQ+  A  +F+ +   + +SWN++I+G+  NGF  Q L+ F  +L 
Sbjct: 417 IEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLM 476

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            +L PN YT++ +L   ++  +L+   Q+H +I++SG     S+ + LIT Y KC  L+ 
Sbjct: 477 STLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDW 536

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACA 489
           S R+ + ++ ++ V  NA+ S         EA+  ++ +  S   + + +TF+ VL AC+
Sbjct: 537 SLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACS 596

Query: 490 AMTDLEQGKAI-HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
               ++ G  I + +     ++      S ++D+  + G +E+A+R
Sbjct: 597 HAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAER 642



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 252/487 (51%), Gaps = 20/487 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHF---TKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           ++++L+IK G  +   +   L++ +    K AD    F     T + DI T+N +I GLA
Sbjct: 205 EVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDI-TFNVMIGGLA 263

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
              +   AL +F  ++   LRP   TF S++ +C S + +  VH   +K+GF +   + +
Sbjct: 264 SVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARVSHQVHAQAIKMGFEACTPVSN 323

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+  G + +  M F    + D +++  ++  Y     +  +   F++M+  G+E 
Sbjct: 324 AAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEP 383

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +EF++ ++L +S  ++  +       K G  S +   ++NA+++ + + GQ   A ++F+
Sbjct: 384 DEFTIGSLLASSESLEIVKMFQALVSKNGLNSKI--EVSNALVSAFSKHGQIEQAYQVFN 441

Query: 238 EITEPDVVSWSERIAAAC-DGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            ++ P+++SW+  I+    +G    GL  F +L  +  + N YT+  +LS       LR 
Sbjct: 442 NMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRH 501

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQI  +  + G   V S+GNALI+MY KCG ++ +  IF+ +  +D VSWN+MI+ Y++
Sbjct: 502 GKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQ 561

Query: 355 NGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDD 412
           +G   +A+  F  M +   + P+  T  ++L A S++  +    ++ + ++   GF    
Sbjct: 562 HGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGA 621

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV--LVYASCHAEA-LELYRTI 469
             +SC++   G+   L E++R++      N+ H+  ++S+   ++++C A   L L R +
Sbjct: 622 DHLSCIVDLLGRAGYLEEAERLI------NSKHLKIVSSIWWTLFSACAAHGNLRLGRIV 675

Query: 470 WGSCREV 476
            G   E+
Sbjct: 676 AGFLLEI 682


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/641 (30%), Positives = 327/641 (51%), Gaps = 10/641 (1%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   L+ G  + V+  +  +  YA  G    A   F +    D V++ ++V  ++ N  
Sbjct: 98  LHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKM 157

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLN 216
           FD +++  + M   G+ +N  SL +V+ A    +EG     +HG  +K G  S V  +L 
Sbjct: 158 FDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIV--NLG 215

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQ 273
           NA++++Y + G    ++K+F+ + E + VSW+  I    +     +   LF+ +    F 
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
               T+ +LL ++        G+++  +  K      + + N+L+ MY K G +  A ++
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ +  ++ VSWN+MIA   +NG  ++A  +   M +    PN  T+ ++L A S   SL
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASL 395

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           K   Q+H+  I++G + D  + + LI  Y KC  L  ++ +  ++ +K+ V  N L    
Sbjct: 396 KTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLILGY 454

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +    E+L L++ +     E +  +F   L AC  ++  +QGK IH + ++       
Sbjct: 455 SQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHP 514

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           F+ + ++ +Y K G ++ A + F +I    +A WN M+MGY  HG      +LF+ M   
Sbjct: 515 FLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDH 574

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           GV  D ++Y+AVL+ C H GLV   + Y S M     L PQ  HYAC+VDLLGR G L  
Sbjct: 575 GVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLA-QNLEPQQMHYACMVDLLGRSGQLTE 633

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           +   I  MP   ++ +W +LL AC I+GNI+L   A   L EL+P++   Y +L N+YA 
Sbjct: 634 SVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAE 693

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           AG WN+  K+R  MK + + K P YSW+  G     F  GD
Sbjct: 694 AGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 152/628 (24%), Positives = 288/628 (45%), Gaps = 40/628 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++  +++GH  D     TL++ +        A R   +   RD++++N+L+S      
Sbjct: 97  ELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL--- 153

Query: 61  QSGPALKLFDRLRY-------QGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS 110
               A K+FD  R         G+  +  +  S+V ACG  QE      VHG+ LK G  
Sbjct: 154 ----ANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLD 209

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
           S V L +  ++ Y K G + ++   F    + + V++ + +  ++  G +     +F  M
Sbjct: 210 SIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGM 269

Query: 171 RSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
              G      +L+++L A      FD+  G ++HG+ +K      +   + N+++++Y +
Sbjct: 270 SERGFMPGSITLSSLLPALVELGYFDL--GREVHGYSIKRAMELDI--FVANSLVDMYAK 325

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
            G    A  +F++I   +VVSW+  IA         EAFGL   ++ +    N  T++NL
Sbjct: 326 FGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNL 385

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +      L+ GKQI A+  + G M  + I NALI MY KCGQ+  A+SIFD L  KD 
Sbjct: 386 LPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDD 444

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VS+N++I GYS++ +  ++L++F  +    +  +  +    L A +N  S KQ  ++H  
Sbjct: 445 VSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGV 504

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE- 461
           +++        + + L+  Y K   L+ + ++ + I +K+    N +  ++ Y   H + 
Sbjct: 505 LVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNM--IMGYG-MHGQI 561

Query: 462 --ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
             A  L+  +       +  ++  VL  C+    +E+GK      L    +      + +
Sbjct: 562 DAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACM 621

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +D+  + G + ++      +   + +  W A++     HG         + +  F +KP+
Sbjct: 622 VDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHL--FELKPE 679

Query: 579 EITYLAVLTSC-CHAGLVREARTYLSCM 605
              Y +VL +    AG   EA    + M
Sbjct: 680 HSGYYSVLRNMYAEAGRWNEAHKIRTLM 707


>gi|242082542|ref|XP_002441696.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
 gi|241942389|gb|EES15534.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
          Length = 810

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 215/735 (29%), Positives = 346/735 (47%), Gaps = 20/735 (2%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G   D   +  L+ ++ K      A     +T  R+++T+ A++S   R       L
Sbjct: 78  IKLGVSADTFTANHLLIYYAKRGHLGSALDVFDETPRRNLVTWTAMVSAAVRGGAPDLGL 137

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC------GSLQENEIVHGVCLKLG-FSSRVYLVSGF 119
            L   +   G  P+ F  +S + AC        ++    +HG+ +K G      Y+ S  
Sbjct: 138 ALLSSMVRSGFCPNEFALASALGACCQSAAAADVKLGLSLHGLAVKAGGLDGNPYVGSSL 197

Query: 120 IENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           +  YAK G + + E  F        D   +  M+ GYV  G         V M   G+  
Sbjct: 198 MLLYAKHGRVAAVERVFAGISSSSRDVACWNTMLEGYVATGRGYDVMRTVVLMHHSGIAA 257

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+  + + AS    D+  G Q+HG  +   F S     + N +M++Y + GQK  AV 
Sbjct: 258 DLFTYISAVKASSITCDLNFGRQVHGLVIHSEFESN--TSVMNTLMDMYFKAGQKEAAVV 315

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F +I   D VSW+  I+      D   A   F D+     + N+ T   +L   G +  
Sbjct: 316 IFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMSRYGCKPNQVTFSVMLRLSGAKES 375

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G QI    Y+ G+ + V + NA+I+M  +CG +  A   F  L  ++ V+WN MIAG
Sbjct: 376 ASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEMIAG 435

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    A+ +F  ++ F   P+ +T  ++L A       +   Q+H+ ++K GF   
Sbjct: 436 YGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGFASC 495

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + LI       ++ +  +++ E  K + V      S  V      EAL L+     
Sbjct: 496 QFVSTSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISAFVKHDLDKEALFLFNLFRV 555

Query: 472 SCREVNGS-TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            C E         +L ACA    + Q + IH L ++  + +   V SA++D Y KCG I 
Sbjct: 556 DCPEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSKHFCVSSALVDAYAKCGDIT 615

Query: 531 DAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            AK  F ++    D    +N M+  YA HG  HEV +L+  M++  + P   T++AV+++
Sbjct: 616 AAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLAPTPATFIAVISA 675

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV + +   S M   HG+ P   +Y C++DLL R GLLE AK  I+ MP  P   
Sbjct: 676 CSHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLLARRGLLEEAKGVIEAMPFQPWPA 735

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W+SL++ C I+GN +LGLLA  ++L + P+++  YV LS++YA  G W      R++M 
Sbjct: 736 VWRSLMNGCRIHGNKELGLLAAEQILTMAPNSDGAYVSLSHVYAEDGDWQSAEDTRRKMA 795

Query: 709 EKFLCKEPGYSWIHV 723
           E    K  GYS + +
Sbjct: 796 ENQAQKPQGYSSVEI 810



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/609 (24%), Positives = 258/609 (42%), Gaps = 29/609 (4%)

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H   +KLG S+  +  +  +  YAK G + SA   F +    + V +TAMV   V  G  
Sbjct: 74  HASTIKLGVSADTFTANHLLIYYAKRGHLGSALDVFDETPRRNLVTWTAMVSAAVRGGAP 133

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLG------ASFDVKEGEQIHGFGVKVGFLSGVCNH 214
           D    +   M   G   NEF+L + LG      A+ DVK G  +HG  VK G L G   +
Sbjct: 134 DLGLALLSSMVRSGFCPNEFALASALGACCQSAAAADVKLGLSLHGLAVKAGGLDG-NPY 192

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEP--DVVSWS---ERIAAACDGVEAFGLFKDLRF 269
           + +++M LY + G+     ++F  I+    DV  W+   E   A   G +       +  
Sbjct: 193 VGSSLMLLYAKHGRVAAVERVFAGISSSSRDVACWNTMLEGYVATGRGYDVMRTVVLMHH 252

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           +    + +T I+ + +      L  G+Q+        F    S+ N L+ MY K GQ   
Sbjct: 253 SGIAADLFTYISAVKASSITCDLNFGRQVHGLVIHSEFESNTSVMNTLMDMYFKAGQKEA 312

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A  IF  + +KD+VSWN+MI+G + +     A D F  M  +   PN  T + +L     
Sbjct: 313 AVVIFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMSRYGCKPNQVTFSVMLRLSGA 372

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
            +S    +Q+     + G+  +  + + +I    +C  L  +      +  +N V  N +
Sbjct: 373 KESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEM 432

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            +      C  +A+ L+R++       +  T+  VL A     D    + IH   LK  +
Sbjct: 433 IAGYGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGF 492

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
               FV +++I      G++ D  +   +  +  L  W   +  + +H    E   LFN 
Sbjct: 493 ASCQFVSTSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISAFVKHDLDKEALFLFNL 552

Query: 570 MS-KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH------YACIV 622
                  KPDE     +L +C +A L+R+ R        +H L+ +  H       + +V
Sbjct: 553 FRVDCPEKPDEFILGTILNACANAALIRQCRC-------IHALVVRTGHSKHFCVSSALV 605

Query: 623 DLLGRVGLLEGAKMTIDQM-PIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPD 679
           D   + G +  AK T  ++  +  DA ++ ++L+A   +G I   L L      L+L P 
Sbjct: 606 DAYAKCGDITAAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLAPT 665

Query: 680 NESTYVLLS 688
             +   ++S
Sbjct: 666 PATFIAVIS 674



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 213/452 (47%), Gaps = 17/452 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+I +    +  +  TL+  + K      A       Q +D +++N +ISGLA   
Sbjct: 280 QVHGLVIHSEFESNTSVMNTLMDMYFKAGQKEAAVVIFGKIQWKDTVSWNTMISGLAHDE 339

Query: 61  QSGPALK-LFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
               A    FD  RY G +P+  TFS +++  G+ +   +   + G+  + G+S  V + 
Sbjct: 340 DERAAADCFFDMSRY-GCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVA 398

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I   ++ G +  A   F +    + V +  M+ GY  +G  + +  +F  +   G  
Sbjct: 399 NAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGAR 458

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +EF+  AVL A     D +  EQIH   +K GF S  C  ++ +++   V  G  LD +
Sbjct: 459 PDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGFAS--CQFVSTSLIKAKVALGSVLDPL 516

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFN-DFQINEYTMINLLSSVGGE 289
           K+ +E  + D+VSW   I+A        EA  LF   R +   + +E+ +  +L++    
Sbjct: 517 KIIEEAGKMDLVSWGVTISAFVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANA 576

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNS 347
            ++R  + I A   + G  +   + +AL+  Y KCG +  A+S F  +  +  D++ +N+
Sbjct: 577 ALIRQCRCIHALVVRTGHSKHFCVSSALVDAYAKCGDITAAKSTFAEVSSVTDDAILYNT 636

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS- 406
           M+  Y+ +G  ++ L ++  M +  L P   T  +++ A S+   ++Q   + S ++ + 
Sbjct: 637 MLTAYANHGLIHEVLSLYQDMTQLQLAPTPATFIAVISACSHLGLVEQGKLLFSSMLSAH 696

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           G     +  +CLI    +   L E+K V+  +
Sbjct: 697 GMNPTRANYTCLIDLLARRGLLEEAKGVIEAM 728



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/393 (20%), Positives = 174/393 (44%), Gaps = 24/393 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI  L  ++G+  + +++  +I+  ++      A+ F  +   R+++T+N +I+G     
Sbjct: 381 QILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEMIAGYGLHG 440

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            S  A++LF  L   G RPD FT+ +++ A       + +E +H   LK GF+S  ++ +
Sbjct: 441 CSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGFASCQFVST 500

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+     G ++       +   +D V++   +  +V   + D  KE         ++ 
Sbjct: 501 SLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISAFV---KHDLDKEALFLFNLFRVDC 557

Query: 178 ----NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
               +EF L  +L A  +   +++   IH   V+ G     C  +++A+++ Y +CG   
Sbjct: 558 PEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSKHFC--VSSALVDAYAKCGDIT 615

Query: 231 DAVKMFDEITE--PDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSS 285
            A   F E++    D + ++  + A A  G+  E   L++D+          T I ++S+
Sbjct: 616 AAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLAPTPATFIAVISA 675

Query: 286 VGGERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SV 343
                ++  GK +  +     G     +    LI +  + G + +A+ + + + F+    
Sbjct: 676 CSHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLLARRGLLEEAKGVIEAMPFQPWPA 735

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
            W S++ G   +G  N+ L +       ++ PN
Sbjct: 736 VWRSLMNGCRIHG--NKELGLLAAEQILTMAPN 766


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 173/509 (33%), Positives = 284/509 (55%), Gaps = 9/509 (1%)

Query: 244 VVSWSERIAAACDGVEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +V W   + AA     +  +   D RF+D+          +++    + L  G+Q+ A  
Sbjct: 15  LVRWDMSVVAARHAASSLAVPGADARFHDYDAA-------ITACVERQALGEGRQVHAHM 67

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K  +   V +   LI +Y +CG ++DAR++ D +  ++ VSW +MI+GYS++G   +AL
Sbjct: 68  VKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEAL 127

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           ++F  ML      N +T+A++L +    +S++Q  QVHS ++K+ F     + S L+  Y
Sbjct: 128 ELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMY 187

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           GK   + E+++V   + +++ V   A+ S         EAL+L+R ++ S  + N  TF+
Sbjct: 188 GKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFT 247

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            +L + + +  L  GK +H L L+      I +++++IDMY KCG +  ++R F  + + 
Sbjct: 248 TLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQR 307

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           S   WNAM+MGY +HG   EV  LF  M++  VKPD +T LAVL+ C H GLV E     
Sbjct: 308 SAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGLVDEGLDIF 366

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             +      +  + HY C++DLLGR G L+ A   I+ MP  P   IW SLL AC ++ N
Sbjct: 367 DLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHIN 426

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           + +G +   KLL+++P N   YV+LSN+YA+AGMW DV ++RK M E  + KEP  SWI 
Sbjct: 427 VSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWII 486

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           +    H F++ +  H + K+I  ++ ++Y
Sbjct: 487 LDKVIHTFHSSERFHPRKKDINAKIKEVY 515



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 201/431 (46%), Gaps = 44/431 (10%)

Query: 84  FSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           + + + AC    +L E   VH   +K  +   VYL +  I  Y + G +  A        
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQ 197
           + + V++TAM+ GY  +G   ++ E+F+ M   G + NEF+L  VL +      +++ EQ
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACD 256
           +H   VK  F S +   + ++++++Y + G   +A K+FD + E D VS +  I+  A  
Sbjct: 164 VHSLVVKTNFESHM--FVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221

Query: 257 GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           G+  EA  LF+ L  +  Q N  T   LL+S+ G   L  GKQ+     +      + + 
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+LI MY KCG++  +R +FD +  + ++SWN+M+ GY  +G   + + +F  M E  + 
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVK 340

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKR 433
           P+  T+ ++L   S+   + + + +   I+K    ++      C+I   G+   L ++  
Sbjct: 341 PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALD 400

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS----CR-EVNGSTFSIVLKAC 488
           ++  +                         E    IWGS    CR  +N S   +V +  
Sbjct: 401 LIEHM-----------------------PFEPTPAIWGSLLGACRVHINVSVGEVVAQ-- 435

Query: 489 AAMTDLEQGKA 499
             + D+E G A
Sbjct: 436 -KLLDMEPGNA 445



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 184/363 (50%), Gaps = 16/363 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K  +     L+T LI  + +      A   L     R+++++ A+ISG ++  
Sbjct: 62  QVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSG 121

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL+LF R+   G + + FT ++++ +C    S+Q+ E VH + +K  F S +++ S
Sbjct: 122 RHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGS 181

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y KSG I  A   F    + D V+ TA++ GY   G  D++ ++F ++ S G++ 
Sbjct: 182 SLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQC 241

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  + T +L +   +     G+Q+HG  ++      +   L N+++++Y +CG+ L + +
Sbjct: 242 NYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIV--LQNSLIDMYSKCGKLLYSRR 299

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + +   +SW+  +        G E   LF+ +   + + +  T++ +LS      +
Sbjct: 300 VFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCSHGGL 358

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSM 348
           +  G  I     K     V+ IG+   +I + G+ GQ+  A  + +++ F+ + + W S+
Sbjct: 359 VDEGLDIFDLIVKEQ-NAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSL 417

Query: 349 IAG 351
           +  
Sbjct: 418 LGA 420


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 207/686 (30%), Positives = 352/686 (51%), Gaps = 15/686 (2%)

Query: 80  DAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           DA+TF SL+KAC  L    +   +H   L  G S   Y+ S  I  YAK G    A   F
Sbjct: 60  DAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVF 119

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE 196
               + + V +T ++  Y   G   ++  +F EMR  G++ +  ++ ++L    ++   +
Sbjct: 120 DYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQ 179

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC- 255
            +HG  +  GF+S +  +L+N+++N+Y +CG    + K+FD +   D+VSW+  I+A   
Sbjct: 180 CLHGCAILYGFMSDI--NLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQ 237

Query: 256 --DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             +  E   L K +R   F+    T  ++LS       L+ G+ +     + GF     +
Sbjct: 238 IGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHV 297

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
             +LI +Y K G+++ A  +F+    KD V W +MI+G  +NG  ++AL +F  ML+F +
Sbjct: 298 ETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGV 357

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+  TMAS++ A +   S      +  +I++    LD +  + L+T Y KC  L++S  
Sbjct: 358 KPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSI 417

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V   +++++ V  NA+ +         EAL L+  +    +  +  T   +L+ CA+   
Sbjct: 418 VFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQ 477

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GK IH   ++      I V+++++DMYCKCG ++ A+R F ++    L  W+A+++G
Sbjct: 478 LHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVG 537

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG        ++K  + G+KP+ + +L+VL+SC H GLV +       M+   G+ P
Sbjct: 538 YGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAP 597

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            LEH+AC+VDLL R G +E A     +    P   +   +L AC   GN +LG    + +
Sbjct: 598 DLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDI 657

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           L L+P +   +V L++ YAS   W +VG+    M+   L K PG+S+I + G    F+  
Sbjct: 658 LMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTD 717

Query: 734 DSSHSQSKEIY-------KELIKLYE 752
            +SH Q +EI        KE+IK+ E
Sbjct: 718 HNSHPQFQEIVCTLKILRKEMIKMEE 743



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 266/555 (47%), Gaps = 19/555 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           ++  ++ +G  LD  ++++LI+ + KF  F    R +FD    R+++ +  +I   +R  
Sbjct: 83  LHQRILVSGLSLDAYIASSLINFYAKFG-FADVARKVFDYMPERNVVPWTTIIGCYSRTG 141

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   A  LFD +R QG++P + T  SL+     L   + +HG  +  GF S + L +  +
Sbjct: 142 RVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSML 201

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K G I  +   F      D V++ +++  Y   G   +   +   MR  G E    
Sbjct: 202 NVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQ 261

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  +VL  +    ++K G  +HG  ++ GF   +  H+  +++ +Y++ G+   A +MF+
Sbjct: 262 TFGSVLSVAASRGELKLGRCLHGQILRAGFY--LDAHVETSLIVVYLKGGKIDIAFRMFE 319

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
             ++ DVV W+  I+         +A  +F+ +     + +  TM +++++         
Sbjct: 320 RSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNL 379

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G  I  +  +      V+  N+L++MY KCG ++ +  +FD +  +D VSWN+M+ GY++
Sbjct: 380 GTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQ 439

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF----LL 410
           NG+  +AL +F  M   +  P+  T+ S+L+  +++  L     +HS +I++G     L+
Sbjct: 440 NGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILV 499

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D S    L+  Y KC  L+ ++R  +++   + V  +A+     Y      AL  Y    
Sbjct: 500 DTS----LVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFL 555

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTI 529
            S  + N   F  VL +C+    +EQG  I+  +        D+   + V+D+  + G +
Sbjct: 556 ESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRV 615

Query: 530 EDAKRAFRKICRDSL 544
           E+A   ++K   D +
Sbjct: 616 EEAYNVYKKKFPDPV 630



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 5/205 (2%)

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
           H + L  Y ++  +    +  TF  +LKAC+ +     G  +H   L +    D ++ S+
Sbjct: 42  HHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASS 101

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +I+ Y K G  + A++ F  +   ++  W  ++  Y++ G   E  +LF++M + G++P 
Sbjct: 102 LINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPS 161

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
            +T L++L        V+     L   + L+G +  +     ++++ G+ G +E ++   
Sbjct: 162 SVTVLSLLFGVSELAHVQ----CLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLF 217

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNI 663
           D M    D   W SL+SA    GNI
Sbjct: 218 DYMD-HRDLVSWNSLISAYAQIGNI 241


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/606 (33%), Positives = 332/606 (54%), Gaps = 16/606 (2%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
           N   D S E +V + S      E+SL   +G    +K+G ++HG  +  G +  +   + 
Sbjct: 21  NSMIDVSPESYVILLS---SFPEYSLAEQVG----LKKGREVHGHVITTGLVDFMVG-IG 72

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           N ++N+Y +CG   DA ++F  + E D VSW+  I         +EA   ++ +R ++  
Sbjct: 73  NGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEIL 132

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
              +T+I+ LSS    +  + G+QI     K+G    VS+ NAL+++Y + G +N+ R I
Sbjct: 133 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 192

Query: 334 FDYLIFKDSVSWNSMIAGY-SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           F  +   D VSWNS+I    S      +A+  F + L      N  T +S+L AVS+   
Sbjct: 193 FSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSF 252

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALAS 451
            +   Q+H   +K     + +  + LI  YGKC  ++  +++ S + ++++ V  N++ S
Sbjct: 253 GELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMIS 312

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             ++    A+AL+L   +  + + ++   ++ VL A A++  LE+G  +H  +++A  + 
Sbjct: 313 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 372

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+ V SA++DMY KCG ++ A R F  +   +   WN+M+ GYA+HG   E   LF  M 
Sbjct: 373 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMK 432

Query: 572 KFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
             G   PD +T++ VL++C HAGL+ E   +   MSD +GL P++EH++C+ DLLGR G 
Sbjct: 433 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGE 492

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLS 688
           L+  +  ID+MP+ P+  IW+++L AC        +LG  A   L +L+P+N   YVLL 
Sbjct: 493 LDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 552

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YA+ G W D+ K RK+MK+  + KE GYSW+ +    H F AGD SH  +  IYK+L 
Sbjct: 553 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLK 612

Query: 749 KLYEHM 754
           +L   M
Sbjct: 613 ELNRKM 618



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 238/466 (51%), Gaps = 15/466 (3%)

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVG----GERI-LRAGKQIQAFCYKVGFME-V 310
           G EA  LF D+  +   ++  + + LLSS       E++ L+ G+++       G ++ +
Sbjct: 10  GEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFM 68

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V IGN L++MY KCG + DAR +F +++ KDSVSWNSMI G  +NG F +A++ +  M  
Sbjct: 69  VGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRR 128

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             ++P  +T+ S L + ++ K  K   Q+H   +K G  L+ S+ + L+T Y +   LNE
Sbjct: 129 HEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 188

Query: 431 SKRVLSEIDKKNAVHINALASVLVYAS-CHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +++ S + + + V  N++   L  +     EA+  +     + +++N  TFS VL A +
Sbjct: 189 CRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVS 248

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGW 547
           +++  E GK IH LALK     +   E+A+I  Y KCG ++  ++ F ++   RD +  W
Sbjct: 249 SLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVT-W 307

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N+M+ GY  +    +  +L   M + G + D   Y  VL++      +       +C S 
Sbjct: 308 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC-SV 366

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--L 665
              L   +   + +VD+  + G L+ A    + MP+  +++ W S++S    +G  +  L
Sbjct: 367 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGEEAL 425

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            L A  KL    P +  T+V + +  + AG+  +  K  + M + +
Sbjct: 426 KLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 471



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 240/529 (45%), Gaps = 60/529 (11%)

Query: 81  AFTFSSLVKACGSLQENEIVHGVCLKLGFSS-RVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           +F   SL +  G L++   VHG  +  G     V + +G +  YAK G I  A   F   
Sbjct: 37  SFPEYSLAEQVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM 95

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GE 196
           ++ D+V++ +M+ G   NG F ++ E +  MR   +    F+L + L +   +K    G+
Sbjct: 96  MEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQ 155

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           QIHG  +K+G    V   ++NA+M LY   G   +  K+F  + E D VSW+  I A   
Sbjct: 156 QIHGESLKLGIDLNVS--VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAS 213

Query: 257 G----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 EA   F +      ++N  T  ++LS+V        GKQI     K    +  +
Sbjct: 214 SERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEAT 273

Query: 313 IGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
             NALI+ YGKCG+++    IF  +   +D V+WNSMI+GY  N    +ALD+   ML+ 
Sbjct: 274 TENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQT 333

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
               + +  A++L A ++  +L++ M+VH+  +++    D  + S L+  Y KC  L+ +
Sbjct: 334 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 393

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS------TFSIVL 485
            R  + +  +N+   N++ S         EAL+L+  +     +++G       TF  VL
Sbjct: 394 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANM-----KLDGQTPPDHVTFVGVL 448

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDS 543
            AC+    LE+G   H  ++   Y     +E  S + D+  + G                
Sbjct: 449 SACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCMADLLGRAG---------------- 491

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
                             E+  L + + K  VKP+ + +  VL +CC A
Sbjct: 492 ------------------ELDKLEDFIDKMPVKPNVLIWRTVLGACCRA 522



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 239/526 (45%), Gaps = 53/526 (10%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSL 87
            AD RR F F+ +   +D +++N++I+GL +      A++ +  +R   + P +FT  S 
Sbjct: 85  IADARRVFCFMME---KDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISS 141

Query: 88  VKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           + +C SL+  ++   +HG  LKLG    V + +  +  YA++G +      F    + D 
Sbjct: 142 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 201

Query: 145 VAYTAMVCGYVWNGEFDKSKEV--FVEMRSLGLELNEFSLTAVLGASFDVKEGE---QIH 199
           V++ +++ G + + E    + V  F+     G +LN  + ++VL A   +  GE   QIH
Sbjct: 202 VSWNSII-GALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 260

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAAACDG- 257
           G  +K            NA++  Y +CG+     K+F  ++E  D V+W+  I+      
Sbjct: 261 GLALKYNIADEATTE--NALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNE 318

Query: 258 --VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              +A  L   +     +++ +    +LS+      L  G ++ A   +      V +G+
Sbjct: 319 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 378

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLI 374
           AL+ MY KCG+++ A   F+ +  ++S SWNSMI+GY+ +G   +AL +F +M L+    
Sbjct: 379 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTP 438

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKR 433
           P+  T   +L A S++  L++  +    +  S G        SC+    G+   L++   
Sbjct: 439 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDK--- 495

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
            L +   K  V  N L               ++RT+ G+C   NG    +  KA   +  
Sbjct: 496 -LEDFIDKMPVKPNVL---------------IWRTVLGACCRANGRKAELGKKAAEMLFQ 539

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           LE   A++ + L               +MY   G  ED  +A +K+
Sbjct: 540 LEPENAVNYVLLG--------------NMYAAGGRWEDLVKARKKM 571



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 5/125 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D ++ + L+  ++K      A RF      R+  ++N++ISG AR  Q   ALKLF  ++
Sbjct: 373 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMK 432

Query: 74  YQG-LRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
             G   PD  TF  ++ AC   G L+E  +    +    G + R+   S   +   ++GE
Sbjct: 433 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGE 492

Query: 129 IVSAE 133
           +   E
Sbjct: 493 LDKLE 497


>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 204/677 (30%), Positives = 354/677 (52%), Gaps = 17/677 (2%)

Query: 81  AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           +F +SSL+ +C +LQ  + +H   +       + + S  I  Y++  +  SA        
Sbjct: 51  SFPYSSLLHSCNNLQALKRIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNSFE 110

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD----VKEGE 196
           + + V + +++  +V +G F  +   +  MR LG+  + F+   +  A +     V+ GE
Sbjct: 111 EPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGE 170

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
            +H   +K+GF   V  +  N ++ +YV+CG   +A K+FDE+T  D+VSW+  I+    
Sbjct: 171 TVHCVAMKMGFGQDV--YFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIY 228

Query: 257 G---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
           G      F LF  +R  + + N  TM+ +L +      +  G+++ ++  K GFM   S+
Sbjct: 229 GESFSRGFKLFNKMRM-EMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSV 287

Query: 314 GNALISMYGKCG-QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
            N+++ MY K G    +  + F  +  +D +SWN +IA YS  G   +  + F  M    
Sbjct: 288 QNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRR-E 346

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           +  +  ++  ++ A++N  +L +   +H   IK+G L D  +++CL+  Y KC AL  S 
Sbjct: 347 VTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTG-LHDTVLMTCLLALYAKCGALEISA 405

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           ++  +I  +N++  +++ S         EA+ELY+ +  S  + N    S ++ A   + 
Sbjct: 406 QLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLG 465

Query: 493 DLEQGKAIHCLALKA----RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
            L+ GKA H   ++       +    +E+++++MY +CG+I  A   F ++    +  W 
Sbjct: 466 ALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWT 525

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +M+ G+  HG   E    F  M +  V+P+ +T+L++L++C H+GLVRE       M   
Sbjct: 526 SMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWG 585

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
             + P L HY C+VDLLGR G L+ A   I ++   PD+ IW +LL+A  ++ +  LG  
Sbjct: 586 FRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEY 645

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           A  KLLEL+PDN   Y L SN+ AS   W +V ++R+ M E+ L K+PG+S I V G  H
Sbjct: 646 AAEKLLELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIH 705

Query: 729 HFYAGDSSHSQSKEIYK 745
            F +GD+SH Q +EI K
Sbjct: 706 GFVSGDTSHHQVEEICK 722



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 294/573 (51%), Gaps = 27/573 (4%)

Query: 4   SLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           SL++ +G    P+ +++ LI+ +++  DFR AF      +  + + +N++I         
Sbjct: 73  SLIVSSG--FQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLF 130

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSL----QENEIVHGVCLKLGFSSRVYLVSG 118
           G AL  + R+R  G+  D+FTF  + +A  SL    +  E VH V +K+GF   VY  + 
Sbjct: 131 GYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNT 190

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +E Y K G I +A   F +    D V++T+++ GY++   F +  ++F +MR + +E N
Sbjct: 191 MLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMR-MEMEPN 249

Query: 179 EFSLTAVLGA--SFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK- 234
             ++  +L A  +F+ V EG ++H + +K GF+  V   + N+I+ +Y + G   + V+ 
Sbjct: 250 SVTMVVMLQACSAFESVNEGRELHSYVIKKGFM--VDRSVQNSILRMYTKTGGSGEEVET 307

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F EI E D++SW+  IA      D  E    F ++R  +   +  ++  ++S++     
Sbjct: 308 FFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMR-REVTSSIESLTLVVSAIANCAN 366

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G  +     K G  + V +   L+++Y KCG +  +  +F  +  ++S++W+SM++G
Sbjct: 367 LSEGGMLHCSAIKTGLHDTV-LMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSG 425

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK--SGFL 409
           +++NGFF +A++++  ML   L PN   +++++ A ++  +L+     H+  I+  S + 
Sbjct: 426 FTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWP 485

Query: 410 LDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            +DS  + + L+  Y +C +++ +    + +  K+ V   ++           EAL+ ++
Sbjct: 486 EEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFK 545

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKC 526
           ++  S  + N  TF  +L AC+    + +G +  H +    R + D+   + ++D+  + 
Sbjct: 546 SMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGRS 605

Query: 527 GTIEDAKRAFRKI--CRDSLAGWNAMMMGYAQH 557
           G +++A     K+  C DS   W A++     H
Sbjct: 606 GKLKEALTVILKLVTCPDSRI-WGALLAASRVH 637



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 213/452 (47%), Gaps = 26/452 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ + +K G   D     T++  + K      A +   +  +RD++++ ++ISG      
Sbjct: 172 VHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGES 231

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
                KLF+++R + + P++ T   +++AC    S+ E   +H   +K GF     + + 
Sbjct: 232 FSRGFKLFNKMRME-MEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNS 290

Query: 119 FIENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  Y K   SGE V  E  F +  + D +++  ++  Y + G+  +  E F EMR    
Sbjct: 291 ILRMYTKTGGSGEEV--ETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVT 348

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
              E SLT V+ A     ++ EG  +H   +K G    V   L   ++ LY +CG    +
Sbjct: 349 SSIE-SLTLVVSAIANCANLSEGGMLHCSAIKTGLHDTV---LMTCLLALYAKCGALEIS 404

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F +I   + ++WS  ++         EA  L++ +  +  Q N   +  L+ +    
Sbjct: 405 AQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHL 464

Query: 290 RILRAGKQIQAFCYK----VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
             L+ GK   AF  +        +   +  +L++MY +CG ++ A   F+ ++ KD V+W
Sbjct: 465 GALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTW 524

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            SMI G+  +G   +AL  F  MLE  + PN  T  S+L A S+S  +++  +V  H +K
Sbjct: 525 TSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVF-HSMK 583

Query: 406 SGFLLDDSM--ISCLITTYGKCNALNESKRVL 435
            GF ++  +   +C++   G+   L E+  V+
Sbjct: 584 WGFRIEPDLNHYTCMVDLLGRSGKLKEALTVI 615



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 179/368 (48%), Gaps = 22/368 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARF 59
           +++S +IK G  +D  +  +++  +TK           F + + RDII++N LI+  +  
Sbjct: 271 ELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFR 330

Query: 60  CQSGPALKLFDRLRYQGLRP-DAFTF-SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
                  + F+ +R +     ++ T   S +  C +L E  ++H   +K G    V L++
Sbjct: 331 GDIAEVAERFNEMRREVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGLHDTV-LMT 389

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G +  +   FRD    +++ +++M+ G+  NG F ++ E++ +M + GL+ 
Sbjct: 390 CLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQP 449

Query: 178 NEFSLTAV------LGASFDVKEGEQIHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQK 229
           N   ++ +      LGA   ++ G+  H F ++    +       L  +++N+Y+RCG  
Sbjct: 450 NHDIISTLVIAYTHLGA---LQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSI 506

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A+  F+ +   DVV+W+  I      G+  EA   FK +  ++ Q N  T ++LLS+ 
Sbjct: 507 SSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSAC 566

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYLIF-KDSV 343
               ++R G ++     K GF     + +   ++ + G+ G++ +A ++   L+   DS 
Sbjct: 567 SHSGLVREGCEV-FHSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSR 625

Query: 344 SWNSMIAG 351
            W +++A 
Sbjct: 626 IWGALLAA 633


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 182/535 (34%), Positives = 300/535 (56%), Gaps = 7/535 (1%)

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQ 273
           HL   ++  Y R  +  DA+K+FD ++  DVVSW+  I    D      L    R  D +
Sbjct: 44  HLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLD---CGNLGMATRLFD-E 99

Query: 274 INEYTMINLLSSVGGERILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + E  +I+  + V G   L+ G+ ++    +    ++ V+  NA++  Y + G+V +   
Sbjct: 100 MPEKNVISWTTMVNG--YLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVR 157

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F+ +  +D +SW SMI G   NG   +AL +F  ML   + P   T A +L A +N+  
Sbjct: 158 LFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVE 217

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
               +QVH H++K G    + +   LIT Y  C  +  + ++ +E   KN V   AL + 
Sbjct: 218 FNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTA 277

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            V+ + H +AL ++  +       N STFSI LKAC  +  L++GK IH +A+K   + D
Sbjct: 278 YVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETD 337

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           +FV ++++ MY +CG +  A   FR I    +  WN++++G AQHG        FN+M +
Sbjct: 338 VFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIR 397

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GV P+EIT+  +L++C  +G++ + R +   +S     + + +HYAC+VD+LGR G L+
Sbjct: 398 RGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLD 457

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A+  +  MP+  ++ IW +LLSAC ++ N+++   A   +L+L+P+  S YVLLSN+YA
Sbjct: 458 EAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYA 517

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SAG W DV ++R +MK+  L K+PG SW+ + G  H F + D SH  S+ IY++L
Sbjct: 518 SAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKL 572



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 222/504 (44%), Gaps = 73/504 (14%)

Query: 12  HLDPILSTTLISHFTKFADFRR-----AFRFLFDT-QNRDIITYNALISGLARFCQSGPA 65
           H+     T  +S+ T  A+  +       R +FD   + ++  Y  +I+G  R  +   A
Sbjct: 3   HITRYTRTITLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDA 62

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVY-------LVS- 117
           LKLFDR+  +    D  +++S++K C            C  LG ++R++       ++S 
Sbjct: 63  LKLFDRMSVR----DVVSWNSMIKGCLD----------CGNLGMATRLFDEMPEKNVISW 108

Query: 118 -GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSL- 173
              +  Y K G +  A+  F D    D  A+ AMV GY  NG  ++   +F EM  R + 
Sbjct: 109 TTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVI 168

Query: 174 -------GLELNEFSLTA---------------------VLGASFDVKE---GEQIHGFG 202
                  GL+LN  S  A                     VL A  +  E   G Q+HG  
Sbjct: 169 SWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHV 228

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVE 259
           VK+G        ++ +++  Y  C +   A K+F+E    +VV W+  + A        +
Sbjct: 229 VKLGCF--FHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQD 286

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  +F D+       N+ T    L +  G   L  GK+I     K+G    V +GN+L+ 
Sbjct: 287 ALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVV 346

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY +CG VN A ++F  +  KD VSWNS+I G +++GF   AL  F  M+   + PN  T
Sbjct: 347 MYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEIT 406

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
              +L A S S  L +      +I +    +L     +C++   G+C  L+E++    E+
Sbjct: 407 FTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAE----EL 462

Query: 439 DKKNAVHINALASVLVYASCHAEA 462
            +   V  N++  + + ++C   +
Sbjct: 463 VRYMPVKANSMIWLALLSACRVHS 486



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 95/191 (49%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G      +S +LI+ +        A +   +T  ++++ + AL++      
Sbjct: 223 QVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNN 282

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL++F  +   G  P+  TFS  +KAC    +L + + +H + +KLG  + V++ +
Sbjct: 283 KHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGN 342

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y + G + SA   FR+  + D V++ +++ G   +G    +   F +M   G++ 
Sbjct: 343 SLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDP 402

Query: 178 NEFSLTAVLGA 188
           NE + T +L A
Sbjct: 403 NEITFTGLLSA 413


>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 699

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 208/668 (31%), Positives = 337/668 (50%), Gaps = 30/668 (4%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           +  H + +K G  S +Y  +  I  Y+K  ++  A   F      D V++ A++ GYV  
Sbjct: 19  QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH 214
            + D + ++   MR  G   +  +  + L      +    G+Q+H   +K+     V + 
Sbjct: 79  ADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFS- 137

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFND 271
             +A++++Y +CG+  DA+ +F  + E + VSW+  IA      D   AF L +      
Sbjct: 138 -GSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEG 196

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             I++ T+  LL+ + G R      Q+     K G      + NA+I+ Y +C  + DA 
Sbjct: 197 VGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAE 256

Query: 332 SIFDYLIF---KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            +F   +    +D V+WNSM+A Y  +   N A D+F  M  F   P+ Y+   ++   S
Sbjct: 257 RVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCS 316

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY----GKCNALNESKRVLSEIDKKNAV 444
             +   +   +H  +IK G  +   + + LI  Y     +C  + ++ R+   +D K+  
Sbjct: 317 IKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCC 374

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             N++ +  V      +AL L+  +     E++  TFS V++ C+ +  L+ G+ +H L+
Sbjct: 375 TWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLS 434

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           LK  +D + +V              +DAK+ F     D+   WN+++ GYAQHG  +   
Sbjct: 435 LKVGFDTNKYVG-------------KDAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIAL 481

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF  M +  VKPD IT++AVLT+C H GLV E R  +  M    G+  ++EHYAC VDL
Sbjct: 482 ELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDL 541

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
            GR G LE  K  ++ MP  PDA + ++LL AC   GNI+L       LL L+P++ STY
Sbjct: 542 YGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTY 601

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VLLS+LY    MW++   + + M+E+ + K PG+SWI V    H F A D SH QSKEIY
Sbjct: 602 VLLSDLYGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIY 661

Query: 745 KELIKLYE 752
           + L++L E
Sbjct: 662 ELLLQLKE 669



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 258/553 (46%), Gaps = 44/553 (7%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L IK+G   D   S  LI+ ++K A    A +       RD +++NA+ISG       
Sbjct: 22  HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADL 81

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGF 119
               +L + +R  G   D  TF S +K     Q  E+   +H V +K+  +  V+  S  
Sbjct: 82  DSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSAL 141

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF--VEMRSLGLEL 177
           ++ YAK G +  A + FR   + + V++  ++ GY   G+ D +  +    E+  +G++ 
Sbjct: 142 LDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDD 201

Query: 178 NEFS--LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
              S  LT + G  F      Q+H   VK G  +   N + NAI+  Y  C    DA ++
Sbjct: 202 GTVSPLLTLLDGVRF-YSLVMQLHCKIVKHGLEA--FNIVCNAIITAYSECCSLQDAERV 258

Query: 236 F---DEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           F     +T  D+V+W+  +AA     +   AF +F +++   F+ ++Y+   ++S    +
Sbjct: 259 FVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIK 318

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMY----GKCGQVNDARSIFDYLIFKDSVSW 345
                G+ +     K G    V + NALI+MY     +C  + DA  IF  +  KD  +W
Sbjct: 319 EHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTW 376

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NS++AGY + G    AL +F  +    +  + YT ++++   S+  +L+   QVH   +K
Sbjct: 377 NSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLK 436

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---A 462
            GF  +  +        GK     ++K+        NA+  N++  +  YA  H +   A
Sbjct: 437 VGFDTNKYV--------GK-----DAKKCFETTSNDNAIIWNSI--IFGYAQ-HGQGNIA 480

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           LEL+  +     + +  TF  VL AC+    +E+G+ I   ++++ +   + +E  +  +
Sbjct: 481 LELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKI-IQSMESDFGIPLRMEHYACAV 539

Query: 521 DMYCKCGTIEDAK 533
           D+Y + G +E+ K
Sbjct: 540 DLYGRAGYLEEGK 552



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 84/167 (50%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L      H   IKSG + D    + LIT Y KC  L  + ++  ++ +++ V  NA+ S
Sbjct: 14  TLPYLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVIS 73

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             V  +      +L   +  S    +  TF   LK  A    LE G+ +H + +K R ++
Sbjct: 74  GYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNE 133

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           ++F  SA++DMY KCG ++DA   FR +   +   WN ++ GY++ G
Sbjct: 134 NVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVG 180


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 203/646 (31%), Positives = 334/646 (51%), Gaps = 21/646 (3%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K G +  A   F      ++V++T +V  +  NG + ++   +  M   GL  +    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 183 TAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
              +G   +S D+K+G+ +H   ++   L      L  A++ +Y RC     A K FDE+
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDII-LGTALITMYARCRDLELARKTFDEM 120

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLS-----SVGGERI 291
            +  +V+W+  IA      D   A  +++D+     +  +   I   S     SV G+  
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD-- 178

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G++I+A     G+     + NALI+MY KCG +  AR +FD L  +D ++WN+MI+G
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++ G   QAL++F  M      PN  T   +L A +N + L+Q   +H  + + G+  D
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298

Query: 412 DSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
             + + L+  Y KC++ L E+++V   +  ++ +  N L    V      +AL++++ + 
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N  T S VL ACA +    QGKA+H L    R   D+ +E+++++MY +CG+++
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           D    F  I   SL  W+ ++  YAQHG        F ++ + G+  D++T ++ L++C 
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478

Query: 591 HAGLVREA-RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           H G+++E  +++LS + D HGL P   H+ C+VDLL R G LE A+  I  MP  PDA  
Sbjct: 479 HGGMLKEGVQSFLSMVGD-HGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA 537

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNE-STYVLLSNLYASAGMWNDVGKLRKEMK 708
           W SLLS C ++ +         KL EL+ ++E ST  LLSN+YA AG W+DV K R    
Sbjct: 538 WTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRA 597

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            +   K PG S+I +    H F AGD SH + + I  E+ +L + M
Sbjct: 598 AR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQM 640



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 230/462 (49%), Gaps = 26/462 (5%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYT 278
           +Y +CG   DA+ +F  I  P+ VSW+  +AA A +G   EA G ++ +     + +   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYL 337
            +  +      + L+ G+ + A   +   +E  + +G ALI+MY +C  +  AR  FD +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS---LIPNGYTMASILEAVSNSKSLK 394
             K  V+WN++IAGYS NG    AL ++  M+  S   + P+  T +S L A S    + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           Q  ++ +  + SG+  D  + + LI  Y KC +L  +++V   +  ++ +  N + S   
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 +ALEL++ +  +  + N  TF  +L AC  + DLEQG+AIH    +  Y+ D+ 
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 515 VESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           + + +++MY KC  ++E+A++ F ++    +  WN +++ Y Q+G   +  ++F +M   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV------DLLGR 627
            V P+EIT   VL++C   G  R+ +        +H LI      A +V      ++  R
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKA-------VHALIASGRCKADVVLENSLMNMYNR 413

Query: 628 VGLLEGAKMTIDQMPIPPDAHI--WQSLLSACTIYGNIDLGL 667
            G L+    T+       D  +  W +L++A   +G+   GL
Sbjct: 414 CGSLDD---TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGL 452



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 214/440 (48%), Gaps = 16/440 (3%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
            D IL T LI+ + +  D   A +   +   + ++T+NALI+G +R      ALK++  +
Sbjct: 92  FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151

Query: 73  ---RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
                +G++PDA TFSS + AC   G + +   +    +  G++S   + +  I  Y+K 
Sbjct: 152 VSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKC 211

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G + SA   F    + D +A+  M+ GY   G   ++ E+F  M     + N  +   +L
Sbjct: 212 GSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLL 271

Query: 187 GASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEP 242
            A     D+++G  IH    + G+ S +   + N ++N+Y +C   L +A ++F+ +   
Sbjct: 272 TACTNLEDLEQGRAIHRKVKEHGYESDLV--IGNVLLNMYTKCSSSLEEARQVFERLRTR 329

Query: 243 DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           DV++W+  I A        +A  +FK ++  +   NE T+ N+LS+       R GK + 
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A          V + N+L++MY +CG ++D   +F  +  K  VSW+++IA Y+++G   
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH-SHIIKSGFLLDDSMISCL 418
             L+ F  +L+  L  +  TM S L A S+   LK+ +Q   S +   G   D     C+
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCM 509

Query: 419 ITTYGKCNALNESKRVLSEI 438
           +    +   L  ++ ++ ++
Sbjct: 510 VDLLSRAGRLEAAENLIHDM 529



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 255/549 (46%), Gaps = 36/549 (6%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGV 103
           +++  +++  AR      AL  + R+  +GLRPD   F   +  C S   L++ +++H +
Sbjct: 24  VSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAM 83

Query: 104 CLK---LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
            L+   L F   + L +  I  YA+  ++  A   F +      V + A++ GY  NG+ 
Sbjct: 84  ILETQLLEFD--IILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141

Query: 161 DKSKEVFVEMRSL---GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNH 214
             + +++ +M S    G++ +  + ++ L A     D+ +G +I    V  G+ S     
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSI-- 199

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND 271
           + NA++N+Y +CG    A K+FD +   DV++W+  I   A      +A  LF+ +  ND
Sbjct: 200 VQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPND 259

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDA 330
            + N  T I LL++      L  G+ I     + G+   + IGN L++MY KC   + +A
Sbjct: 260 PKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEA 319

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R +F+ L  +D ++WN +I  Y + G    ALD+F  M   ++ PN  T++++L A +  
Sbjct: 320 RQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVL 379

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            + +Q   VH+ I       D  + + L+  Y +C +L+++  V + I  K+ V  + L 
Sbjct: 380 GAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLI 439

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-------KAIHCL 503
           +           LE +  +       +  T    L AC+    L++G          H L
Sbjct: 440 AAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGL 499

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYH 561
           A   R+    F+   ++D+  + G +E A+     +    D++A W +++ G   H    
Sbjct: 500 APDYRH----FL--CMVDLLSRAGRLEAAENLIHDMPFLPDAVA-WTSLLSGCKLHNDTK 552

Query: 562 EVSNLFNKM 570
             + + +K+
Sbjct: 553 RAARVADKL 561



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 176/365 (48%), Gaps = 18/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I +  + +G+  D I+   LI+ ++K      A +     +NRD+I +N +ISG A+  
Sbjct: 184 EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQG 243

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVS 117
            +  AL+LF R+     +P+  TF  L+ AC +L++ E    +H    + G+ S + + +
Sbjct: 244 AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGN 303

Query: 118 GFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             +  Y K S  +  A   F      D + +  ++  YV  G+   + ++F +M+   + 
Sbjct: 304 VLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVA 363

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH---LNNAIMNLYVRCGQKLDAV 233
            NE +L+ VL A   +  G +  G  V     SG C     L N++MN+Y RCG   D V
Sbjct: 364 PNEITLSNVLSACAVL--GAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTV 421

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGER 290
            +F  I +  +VSWS  IAA A  G    GL  F +L       ++ TM++ LS+     
Sbjct: 422 GVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGG 481

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGN---ALISMYGKCGQVNDARS-IFDYLIFKDSVSWN 346
           +L+ G  +Q+F   VG   +         ++ +  + G++  A + I D     D+V+W 
Sbjct: 482 MLKEG--VQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 347 SMIAG 351
           S+++G
Sbjct: 540 SLLSG 544


>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 652

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 190/572 (33%), Positives = 311/572 (54%), Gaps = 11/572 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D   G+QIHGF V+ GFL      +  +++N+Y +CG    AV +F   +E DV  ++  
Sbjct: 74  DSVSGQQIHGFMVRKGFLDDSPRAVT-SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNAL 131

Query: 251 IAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G  ++A  +++++R      ++YT  +LL       +    K++ A  +K+GF
Sbjct: 132 ISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSDV-KKVHALAFKLGF 190

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSENGFFNQALDMFC 366
           +    +G+AL++ Y K   V DA+ +FD L  +D SV WN+++ GYS    F  AL +F 
Sbjct: 191 VSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFS 250

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M E  +  + +T+ S+L + + S  L     +H   +K GF     + + LI  YGK  
Sbjct: 251 KMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSK 310

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L E+  +   +D+++    N++  V  Y   H   L L+ T+  S    +  T + VL 
Sbjct: 311 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLP 370

Query: 487 ACAAMTDLEQGKAIH----CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            C  +  L+QG+ IH       L  R   + F+ ++++DMY KCG + DA+  F  +   
Sbjct: 371 TCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVK 430

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
             A WN M+ GY    C     ++F+ M + GVKPDEIT++ +L +C H+G V E R +L
Sbjct: 431 DSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFL 490

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + M  L+ ++P  +HYAC++D+LGR   LE A      MPI  +  +W+S+LS+C ++GN
Sbjct: 491 AQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGN 550

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            DL ++AG +L EL+P++   YVL+SN+Y  A  + +V  +R  MKE+ + K PG SWI 
Sbjct: 551 KDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIG 610

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +    H F+ GD +H + + I+  L  L  HM
Sbjct: 611 LQNGVHTFFTGDQTHPEFESIHGWLSLLISHM 642



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 229/446 (51%), Gaps = 18/446 (4%)

Query: 1   QIYSLLIKNGHHLD-PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI+  +++ G   D P   T+L++ + K    RRA   +F    RD+  YNALISG    
Sbjct: 80  QIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAV-LVFGGSERDVFGYNALISGFVVN 138

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--VHGVCLKLGFSSRVYLVS 117
                A+ ++  +R +G+ PD +TF SL+K   +++ +++  VH +  KLGF S  Y+ S
Sbjct: 139 GSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSDVKKVHALAFKLGFVSDCYVGS 198

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             + +Y+K   +  A+  F +  D D+ V + A+V GY     F+ +  VF +MR  G+ 
Sbjct: 199 ALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREEGVA 258

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  ++T+VL +   S D+  G  IHG  VK+GF SG+   ++NA+++LY +     +A 
Sbjct: 259 MSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIV--VSNALIDLYGKSKWLEEAN 316

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+ + E D+ +W+  +       D      LF+ +  +  + +  T+  +L + G   
Sbjct: 317 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLA 376

Query: 291 ILRAGKQIQAFCYKVGFMEVVS----IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            L+ G++I  +    G +   S    I N+L+ MY KCG + DAR +FD +  KDS SWN
Sbjct: 377 SLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 436

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            MI GY        ALDMF  M    + P+  T   +L+A S+S  + +     + +   
Sbjct: 437 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETL 496

Query: 407 GFLLDDS-MISCLITTYGKCNALNES 431
             +L  S   +C+I   G+ + L E+
Sbjct: 497 YNILPTSDHYACVIDMLGRADKLEEA 522



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 177/365 (48%), Gaps = 16/365 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRD-IITYNALISGLARF 59
           ++++L  K G   D  + + L++ ++KF     A +   +  +RD  + +NAL++G +  
Sbjct: 180 KVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHI 239

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLV 116
            +   AL +F ++R +G+     T +S++ +    G L     +HG+ +K+GF S + + 
Sbjct: 240 FRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVS 299

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y KS  +  A   F    + D   + +++C + + G+ D +  +F  M   G+ 
Sbjct: 300 NALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIR 359

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLD 231
            +  +LT VL   G    +K+G +IHG+ +  G L+   ++  ++N++M++YV+CG   D
Sbjct: 360 PDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRD 419

Query: 232 AVKMFDEITEPDVVSWSERI----AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A  +FD +   D  SW+  I      +C G  A  +F  +     + +E T + LL +  
Sbjct: 420 ARMVFDSMRVKDSASWNIMINGYGVQSC-GELALDMFSCMCRAGVKPDEITFVGLLQACS 478

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSI-FDYLIFKDSVSW 345
               +  G+   A    +  +   S   A +I M G+  ++ +A  +     I  + V W
Sbjct: 479 HSGFVNEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVW 538

Query: 346 NSMIA 350
            S+++
Sbjct: 539 RSILS 543



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 141/303 (46%), Gaps = 21/303 (6%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS--MISCLITTYGKCNALNESKR 433
           N  T  + L+  +  K      Q+H  +++ GF LDDS   ++ L+  Y KC  +  +  
Sbjct: 58  NVATSIATLQRCAQRKDSVSGQQIHGFMVRKGF-LDDSPRAVTSLVNMYAKCGLMRRAVL 116

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V     +++    NAL S  V      +A+++YR +       +  TF  +LK   AM +
Sbjct: 117 VFGG-SERDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAM-E 174

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMM 552
           +   K +H LA K  +  D +V SA++  Y K  ++EDA++ F ++  RD    WNA++ 
Sbjct: 175 VSDVKKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 234

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           GY+    + +   +F+KM + GV     T  +VL+S   +G +   R+       +HGL 
Sbjct: 235 GYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRS-------IHGLA 287

Query: 613 PQLEHYACIV------DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            ++   + IV      DL G+   LE A    + M    D   W S+L      G+ D G
Sbjct: 288 VKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHD-G 345

Query: 667 LLA 669
            LA
Sbjct: 346 TLA 348


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 219/684 (32%), Positives = 351/684 (51%), Gaps = 16/684 (2%)

Query: 86  SLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           SL++ C    SL++ ++VH   L +G  S V L    I  Y    +  SA + F + +D+
Sbjct: 8   SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFEN-IDI 66

Query: 143 --DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-NEFSLTAVLGASFDVKE---GE 196
             D   + ++V GY  N  F  + +VF  + +  + + + F+   V+ A   +     G 
Sbjct: 67  RSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGR 126

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--- 253
            IH   VK G +  V   + ++++ +Y +     D+V++FDE+ E DV SW+  I++   
Sbjct: 127 MIHTVVVKSGHVCDVV--VASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQ 184

Query: 254 ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             D  +A  LF  +  +DF+ N  ++   +S+      L  GK+I     K  F     +
Sbjct: 185 RGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYV 244

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            +AL+ MYG+C  +  AR +F  +  K  V+WNSMI GY   G     +++   M+    
Sbjct: 245 NSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT 304

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+  T+ SIL A S S++L     VH ++I+S    D  +   LI  Y KC  +  ++ 
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAET 364

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V  +  K      N + S  V      +A+++Y  +     + +  TF+ VL  C+ +  
Sbjct: 365 VFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAA 424

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           LE+GK IH    ++R + D  + SA++DMY KCG +++A R F  I +  +  W  M+  
Sbjct: 425 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISA 484

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y  HG   E    F++M KFGVKPD +T+LAVL++C HAGL+ E   Y S M   +G+  
Sbjct: 485 YGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEA 544

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD-AHIWQSLLSACTIYGNIDLGLLAGSK 672
            +E Y+C++D+LGR G L  A   + Q P   D A +  +L  AC ++ +  LG      
Sbjct: 545 SIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKL 604

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           L+E  PD+ STY +L NLYAS   W+   ++R +MKE  + K+PG SWI +     HF+A
Sbjct: 605 LVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFA 664

Query: 733 GDSSHSQSKEIYKELIKLYEHMVA 756
            D SH Q++ +Y+ L  L  HM A
Sbjct: 665 EDRSHPQAENVYECLALLSGHMEA 688



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 262/546 (47%), Gaps = 20/546 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLARF 59
           ++  ++  G   D +L  +LI+ +    D   A R +F+  +   D+  +N+L+SG ++ 
Sbjct: 25  VHQRILTVGLRSDVVLCKSLINVYFACKDHCSA-RLVFENIDIRSDVYIWNSLVSGYSKN 83

Query: 60  CQSGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYL 115
                 LK+F RL    +  PD+FT+ +++KA G+L       ++H V +K G    V +
Sbjct: 84  SMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVV 143

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  +  YAK      +   F +  + D  ++  ++  +   G+ +K+ E+F  M     
Sbjct: 144 ASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDF 203

Query: 176 ELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E N  S+T  + A      ++ G++IH   +K  F   +  ++N+A++++Y RC     A
Sbjct: 204 EPNSVSITVAISACSRLLCLERGKEIHRKYLKKEF--ELDEYVNSALVDMYGRCDFLEMA 261

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F ++    +V+W+  I    A  D      L   +     + ++ T+ ++L +    
Sbjct: 262 REVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRS 321

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSM 348
           R L  GK +  +  +      + I  +LI +Y KCG+V  A ++F     KD V SWN M
Sbjct: 322 RNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVF-LKTQKDVVESWNVM 380

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+GY   G + +A+D++  M+   + P+  T  S+L   S   +L++  Q+H  I +S  
Sbjct: 381 ISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRL 440

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D+ ++S L+  Y KC  + E+ R+ + I KK+ V    + S         EAL  +  
Sbjct: 441 ETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDE 500

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKC 526
           +     + +G TF  VL AC     +++G   +   ++++Y  +  +E  S +ID+  + 
Sbjct: 501 MQKFGVKPDGVTFLAVLSACGHAGLIDEG-VKYFSQMRSKYGIEASIEQYSCLIDILGRA 559

Query: 527 GTIEDA 532
           G + +A
Sbjct: 560 GRLLEA 565



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 231/469 (49%), Gaps = 18/469 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+++++K+GH  D +++++L+  + KF  F  + +   +   RD+ ++N +IS   +   
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           +  AL+LF R+      P++ + +  + AC     L+  + +H   LK  F    Y+ S 
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y +   +  A   F+       VA+ +M+ GYV  G+     E+   M   G   +
Sbjct: 248 LVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPS 307

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + +LT++L A   S ++  G+ +HG+ ++    + +  ++N ++++LY +CG+   A  +
Sbjct: 308 QTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADI--YINCSLIDLYFKCGEVKLAETV 365

Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F +  +  V SW+  I+   +  +  +A  ++  +     Q +  T  ++LS+      L
Sbjct: 366 FLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAAL 425

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GKQI     +        + +AL+ MY KCG V +A  IF+ +  KD VSW  MI+ Y
Sbjct: 426 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAY 485

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +G   +AL  F  M +F + P+G T  ++L A  ++  + + ++  S  ++S + ++ 
Sbjct: 486 GSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQ-MRSKYGIEA 544

Query: 413 SM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINA-LASVLVYASC 458
           S+   SCLI   G+   L E+  +L +   K     NA L S L  A C
Sbjct: 545 SIEQYSCLIDILGRAGRLLEAYGILQQ---KPETRDNAELLSTLFCACC 590



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 167/345 (48%), Gaps = 14/345 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           +I+   +K    LD  +++ L+  + +  DF    R +F    R  ++ +N++I G    
Sbjct: 228 EIHRKYLKKEFELDEYVNSALVDMYGR-CDFLEMAREVFQQMRRKSLVAWNSMIRGYVAR 286

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
             S   ++L +R+  +G RP   T +S++ AC    +L   + VHG  ++    + +Y+ 
Sbjct: 287 GDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYIN 346

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I+ Y K GE+  AE  F         ++  M+ GYV  G + K+ +V+ +M S+G++
Sbjct: 347 CSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQ 406

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  + T+VL        +++G+QIH   +    L      L +A++++Y +CG   +A 
Sbjct: 407 PDIVTFTSVLSTCSQLAALEKGKQIH-LSISESRLE-TDELLLSALLDMYSKCGNVKEAS 464

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+ I + DVVSW+  I+A        EA   F +++    + +  T + +LS+ G   
Sbjct: 465 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAG 524

Query: 291 ILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           ++  G K       K G    +   + LI + G+ G++ +A  I 
Sbjct: 525 LIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGIL 569



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 11/268 (4%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           + S+L   +N+KSL+QA  VH  I+  G   D  +   LI  Y  C     ++ V   ID
Sbjct: 6   LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65

Query: 440 KKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGS-TFSIVLKACAAMTDLEQG 497
            ++ V+I N+L S     S   + L++++ +      V  S T+  V+KA  A+     G
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLG 125

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + IH + +K+ +  D+ V S+++ MY K    ED+ + F ++    +A WN ++  + Q 
Sbjct: 126 RMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQR 185

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA----RTYLSCMSDLHGLIP 613
           G   +   LF +M +   +P+ ++    +++C     +       R YL    +L   + 
Sbjct: 186 GDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVN 245

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQM 641
                + +VD+ GR   LE A+    QM
Sbjct: 246 -----SALVDMYGRCDFLEMAREVFQQM 268


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 175/497 (35%), Positives = 272/497 (54%), Gaps = 32/497 (6%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG------------------------ 325
           R L  GK++ A      F+  + I N LI MY KCG                        
Sbjct: 77  RKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMI 136

Query: 326 -------QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF-SLIPNG 377
                  ++  AR +FD +  +D+ SWN++I+GY   G++ +ALD+F  M E  S   N 
Sbjct: 137 SGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNM 196

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           +T++S L A +   SL++  ++H ++I+SG  LD+ + + L+  YGKC +LNE++ +  +
Sbjct: 197 FTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQ 256

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ V    +           E   L+R + GS    N  TF+ VL ACA +   + G
Sbjct: 257 MADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMG 316

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K +H    +  YD   F  SA++ +Y KCG  E A+R F ++ R  L  W ++++GYAQ+
Sbjct: 317 KEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQN 376

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G        F  + + G KPDEIT++ VL++C HAGLV     Y   + + HGL+   +H
Sbjct: 377 GQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADH 436

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC++DLL R G  + A+  ID MP+ PD  +W SLL  C I+GNI+L   A   L EL+
Sbjct: 437 YACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELE 496

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P+N +TY+ LSN+YA+AG+W +  K+R +M  + + K+PG SWI +    H F  GD+SH
Sbjct: 497 PENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSH 556

Query: 738 SQSKEIYKELIKLYEHM 754
            +  +I++ L +L + M
Sbjct: 557 PKISDIHEYLGELSKKM 573



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 194/430 (45%), Gaps = 55/430 (12%)

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
           FCQ     +  D L ++  +P    +S+L+ AC     L+  + VH       F   + +
Sbjct: 42  FCQQNRLKEAVDYL-HRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVI 100

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I  YAK G +V A+M F +    D  ++  M+ GY   G  ++++++F EM     
Sbjct: 101 SNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMP---- 156

Query: 176 ELNEFSLTAVLGA---------SFDV------------------------------KEGE 196
             + FS  AV+           + D+                              + G+
Sbjct: 157 HRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGK 216

Query: 197 QIHGFGVKVGF-LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
           +IHG+ ++ G  L  V   +  A+++LY +CG   +A  +FD++ + D+VSW+  I    
Sbjct: 217 EIHGYLIRSGLELDEV---VWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCF 273

Query: 256 -DG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
            DG   E F LF+DL  +  + NEYT   +L++       + GK++  +  +VG+     
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSF 333

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
             +AL+ +Y KCG    AR +F+ +   D VSW S+I GY++NG  + AL  F  +L   
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSG 393

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
             P+  T   +L A +++  +   ++  HS   K G +      +C+I    +     E+
Sbjct: 394 TKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEA 453

Query: 432 KRVLSEIDKK 441
           + ++  +  K
Sbjct: 454 ENIIDNMPMK 463



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 201/449 (44%), Gaps = 58/449 (12%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA-- 252
           G+++H       F+ G+   ++N ++++Y +CG  +DA  +FDEI + D+ SW+  I+  
Sbjct: 82  GKRVHAHTKASNFIPGIV--ISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGY 139

Query: 253 -------------------------AACDG-------VEAFGLFKDLRFNDF-QINEYTM 279
                                    A   G       +EA  LF+ ++ N+    N +T+
Sbjct: 140 ANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTL 199

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            + L++      LR GK+I  +  + G      +  AL+ +YGKCG +N+AR IFD +  
Sbjct: 200 SSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMAD 259

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD VSW +MI    E+G   +   +F  ++   + PN YT A +L A ++  + +   +V
Sbjct: 260 KDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEV 319

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H ++ + G+       S L+  Y KC     ++RV +++ + + V   +L          
Sbjct: 320 HGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQP 379

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDL-----EQGKAIHCLALKARYDQD 512
             AL+ + ++  S  + +  TF  VL AC  A + D+        K  H L   A +   
Sbjct: 380 DMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADH--- 436

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
               + VID+  + G  ++A+     +  +     W +++ G   HG       L  + +
Sbjct: 437 ---YACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNI----ELAERAA 489

Query: 572 K--FGVKPD-EITYLAVLTSCCHAGLVRE 597
           K  F ++P+   TY+ +     +AGL  E
Sbjct: 490 KALFELEPENPATYITLSNIYANAGLWTE 518



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 46/394 (11%)

Query: 346 NSMIAGYSENGFFNQALDMFCHM---------LEFSLIPNGYTMASILEAVSNSKSLKQA 396
           ++ ++ +SE+  F + +++FC           L     P+    ++++ A    + L+  
Sbjct: 23  DTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELG 82

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNAL---------------------------- 428
            +VH+H   S F+    + + LI  Y KC +L                            
Sbjct: 83  KRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANV 142

Query: 429 ---NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW-GSCREVNGSTFSIV 484
               +++++  E+  ++    NA+ S  V    + EAL+L+R +        N  T S  
Sbjct: 143 GRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSA 202

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L A AA++ L +GK IH   +++  + D  V +A++D+Y KCG++ +A+  F ++    +
Sbjct: 203 LAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDI 262

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             W  M+    + G   E  +LF  +   GV+P+E T+  VL +C      +  +     
Sbjct: 263 VSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGY 322

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           M+ + G  P     + +V +  + G  E A+   +QMP  PD   W SL+      G  D
Sbjct: 323 MTRV-GYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPD 380

Query: 665 LGLLAGSKLLE--LQPDNESTYVLLSNLYASAGM 696
           + L     LL    +PD E T+V + +    AG+
Sbjct: 381 MALQFFESLLRSGTKPD-EITFVGVLSACTHAGL 413



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/383 (21%), Positives = 165/383 (43%), Gaps = 53/383 (13%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++S  LI  + K      A     +   +D+ ++N +ISG A   +   A KLFD + ++
Sbjct: 99  VISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR 158

Query: 76  GLRPDAFTFSSLVKACGS-------------LQENEI----------------------- 99
               D F++++++    S             +QENE                        
Sbjct: 159 ----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRR 214

Query: 100 ---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +HG  ++ G      + +  ++ Y K G +  A   F    D D V++T M+     
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCN 213
           +G   +   +F ++   G+  NE++   VL A  D+   + G+++HG+  +VG+     +
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGY--DPFS 332

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFN 270
              +A++++Y +CG    A ++F+++  PD+VSW+  I       +   A   F+ L  +
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
             + +E T + +LS+     ++  G +   +   K G +        +I +  + G+  +
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452

Query: 330 ARSIFDYLIFK-DSVSWNSMIAG 351
           A +I D +  K D   W S++ G
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGG 475



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 12/257 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +I+  LI++G  LD ++ T L+  + K      A R +FD   ++DI+++  +I      
Sbjct: 217 EIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEA-RGIFDQMADKDIVSWTTMIHRCFED 275

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +      LF  L   G+RP+ +TF+ ++ AC  L   ++   VHG   ++G+    +  
Sbjct: 276 GRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAA 335

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y+K G   +A   F      D V++T+++ GY  NG+ D + + F  +   G +
Sbjct: 336 SALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTK 395

Query: 177 LNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            +E +   VL A      V  G E  H    K G +    ++    +++L  R G+  +A
Sbjct: 396 PDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYA--CVIDLLARSGRFKEA 453

Query: 233 VKMFDEIT-EPDVVSWS 248
             + D +  +PD   W+
Sbjct: 454 ENIIDNMPMKPDKFLWA 470


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 207/708 (29%), Positives = 367/708 (51%), Gaps = 33/708 (4%)

Query: 72  LRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGF-SSRVYLVSGFIENYAKSG 127
           L  Q +R +  T++ L++ C    +L E   +H + +K       + L +  +  YA   
Sbjct: 34  LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93

Query: 128 EIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
               A+  F D L+  N+ ++T +V  +  +G+  ++      MR  G+  +  +    L
Sbjct: 94  SPGDAKAAF-DALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152

Query: 187 GASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP- 242
           G+  D   +++G +IH   V       +   ++NA++N+Y +CG    A ++F ++    
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRL--EIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTR 210

Query: 243 DVVSWSERIAAACDGV-----EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           +V+SWS  I A    +     EA   F+ +     +  +  M+ +LS+     +++ G+ 
Sbjct: 211 NVISWS--IMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRL 268

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMIAGYSEN 355
           I +     GF   + + NA+++MYG+CG V +AR +FD +    +D VSWN M++ Y  N
Sbjct: 269 IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHN 328

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
                A+ ++  M    L  +  T  S+L A S+++ +     +H  I+      +  + 
Sbjct: 329 DRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG 385

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW----- 470
           + L++ Y KC +  E++ V  ++++++ +    + S  V     AEA  L++ +      
Sbjct: 386 NALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKN 445

Query: 471 GSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           GS + V  +   F  +L ACA ++ LEQGK +   A       D  V +AV+++Y KCG 
Sbjct: 446 GSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 505

Query: 529 IEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           IE+ +R F  +C R  +  WNAM+  YAQ G  HE   LF +M   GV+PD  +++++L 
Sbjct: 506 IEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 565

Query: 588 SCCHAGLVREARTYLSCMS-DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           +C H GL  + ++Y + M+ +   +   ++H+ C+ DLLGR G L+ A+  ++++P+ PD
Sbjct: 566 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPD 625

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
           A  W SLL+AC  + ++       +KLL L+P   + YV LSN+YA    W+ V K+RK 
Sbjct: 626 AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKF 685

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           M E+ + KE G S I +G Y H F  GD +H +++EI +EL KL+  M
Sbjct: 686 MAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQM 733



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/603 (24%), Positives = 279/603 (46%), Gaps = 41/603 (6%)

Query: 1   QIYSLLIKNGHHLDP---ILSTTLIS---HFTKFADFRRAFRFLFDTQNRDIITYNALIS 54
           +I+SL +K  H+L P   IL   ++S   H     D + AF  L   + R++ ++  L++
Sbjct: 64  KIHSLAVK--HNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDAL---EQRNLYSWTGLVA 118

Query: 55  GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSS 111
             A   QS   L+  +R+R  G+RPDA TF + + +CG   SL++   +H + +      
Sbjct: 119 AFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEI 178

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEM 170
              + +  +  Y K G +  A+  F       NV +++ M   +  +G   ++   F  M
Sbjct: 179 DPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFM 238

Query: 171 RSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
             LG++  + ++  +L A      V++G  IH      GF S +   + NA+M +Y RCG
Sbjct: 239 LLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELL--VANAVMTMYGRCG 296

Query: 228 QKLDAVKMFDEITEP--DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINL 282
              +A K+FD + E   DVVSW+  ++A      G +A  L++ ++    + ++ T ++L
Sbjct: 297 AVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSL 353

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           LS+      +  G+ +          + V +GNAL+SMY KCG   +AR++FD +  +  
Sbjct: 354 LSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSI 413

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFS-------LIPNGYTMASILEAVSNSKSLKQ 395
           +SW ++I+ Y       +A  +F  MLE         + P+     +IL A ++  +L+Q
Sbjct: 414 ISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQ 473

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI-NALASVLV 454
              V       G   D ++ + ++  YGKC  + E +R+   +  +  V + NA+ +V  
Sbjct: 474 GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYA 533

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY---DQ 511
                 EAL+L+  +       +  +F  +L AC+     +QGK+ +  ++   Y    +
Sbjct: 534 QFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKS-YFTSMTTEYRNVTR 592

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            I     V D+  + G +++A+    K+  +     W +++     H        + NK+
Sbjct: 593 TIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKL 652

Query: 571 SKF 573
            + 
Sbjct: 653 LRL 655


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 176/536 (32%), Positives = 289/536 (53%), Gaps = 3/536 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFND 271
           + N ++ +Y  CG  +D  K+FDE+   ++VSW   I+A     E   A  LF D++ + 
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + N    ++LL S  G   L  GKQI +   +      +++  A+ +MY +CG +  A+
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD +  +++V+W  ++ GY++      AL++F  M    +  + +  + +L+     +
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLE 303

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
                 Q+HSHI+K G   + S+ + L+  Y KC  +  + R    I + N V  +AL S
Sbjct: 304 DWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
               +    + ++++ ++      +N   ++ V +ACAA  +L  G   H  A+K     
Sbjct: 364 GFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            ++ ESA++ MY KCG ++ A+RAF  I       W A++ GYA HG   E    F +M 
Sbjct: 424 YLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQ 483

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
            +GV+P+ +T++AVLT+C H+GLV EA+ YL  MS  +G+ P ++HY C++D   R GLL
Sbjct: 484 SYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLL 543

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A   I++MP  PDA  W+SLL  C  + ++ LG +A   L  L P + + Y+LL NLY
Sbjct: 544 QEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLY 603

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           ++ G W + G +RK M E+ L KE   SWI V G  H F  GD  H Q++ IY +L
Sbjct: 604 SAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKL 659



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 193/410 (47%), Gaps = 14/410 (3%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA    K++   D  +  ++   L  + G  R L  G+ I     +       SI N L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY  CG   D + +FD ++ K+ VSW  +I+ Y++NG   +A+ +F  M    + PN  
Sbjct: 130 RMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSA 189

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
              S+L++      L+   Q+HSH+I++    + ++ + +   Y +C  L  +K V   +
Sbjct: 190 VYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM 249

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           D +NAV    L      A     ALEL+  +     E++   FSIVLK C  + D + G+
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGR 309

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH   +K   + ++ V + ++D Y KCG IE A R+F +I   +   W+A++ G++Q G
Sbjct: 310 QIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSG 369

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH------GLI 612
              +   +F  +   GV  +   Y +V  +C        A+  L+  S  H      GL+
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA-------AQANLNMGSQAHGDAIKRGLV 422

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             L   + +V +  + G L+ A+   + +   PDA  W +++S    +GN
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 204/406 (50%), Gaps = 14/406 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           ++++++  +IS  A+  +   A++LF  ++  G+RP++  + SL+++C     L+  + +
Sbjct: 151 KNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQI 210

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGE 159
           H   ++   ++ + + +     Y + G +  A++ F D +D  N V +T ++ GY    +
Sbjct: 211 HSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF-DGMDAQNAVTWTGLMVGYTQAKK 269

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
            + + E+F  M   G+EL+EF  + VL     +++   G QIH   VK+G  S V   + 
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEV--SVG 327

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
             +++ YV+CG    A + F  I+EP+ VSWS  I+         +   +F  LR     
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +N +   ++  +   +  L  G Q      K G +  +   +A+++MY KCG+++ AR  
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ +   D+V+W ++I+GY+ +G   +AL  F  M  + + PN  T  ++L A S+S  +
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507

Query: 394 KQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +A Q    + +  G         C+I TY +   L E+  +++ +
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRM 553



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 188/363 (51%), Gaps = 15/363 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           QI+S +I+   + +  + T + + + +      A + +FD  + ++ +T+  L+ G  + 
Sbjct: 209 QIHSHVIRAQLNANITVETAICNMYVRCGWLEGA-KLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   AL+LF R+  +G+  D F FS ++K C  L++ ++   +H   +KLG  S V + 
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVG 327

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K G+I SA   F    + ++V+++A++ G+  +G  +   ++F  +RS G+ 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           LN F  T+V     A  ++  G Q HG  +K G +S +  +  +A++ +Y +CG+   A 
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL--YGESAMVTMYSKCGRLDYAR 445

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           + F+ I EPD V+W+  I+      +  EA G F+ ++    + N  T I +L++     
Sbjct: 446 RAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++   KQ + +     G    +   + +I  Y + G + +A  + + + F+ D++SW S+
Sbjct: 506 LVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSL 565

Query: 349 IAG 351
           + G
Sbjct: 566 LGG 568



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 6/321 (1%)

Query: 346 NSMIAGYSENGFFNQALDMFCHM--LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           N  +   S+ G   +A D    M   + S+ P+ Y    + EA    +SL     +H  +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQ--CLFEACGKLRSLADGRLIHDRL 113

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
            ++      S+ +CL+  Y  C +  + ++V  E+  KN V    + S         +A+
Sbjct: 114 RRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAI 173

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +  S    N + +  +L++C   + LE GK IH   ++A+ + +I VE+A+ +MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMY 233

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            +CG +E AK  F  +   +   W  +M+GY Q         LF +M+  GV+ DE  + 
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            VL  CC        R   S +  L G   ++     +VD   + G +E A  +  ++  
Sbjct: 294 IVLKVCCGLEDWDMGRQIHSHIVKL-GAESEVSVGTPLVDFYVKCGDIESAYRSFGRISE 352

Query: 644 PPDAHIWQSLLSACTIYGNID 664
           P D   W +L+S  +  G ++
Sbjct: 353 PNDVS-WSALISGFSQSGRLE 372


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 199/645 (30%), Positives = 331/645 (51%), Gaps = 17/645 (2%)

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  I  Y +     SA M F   LD + V++ A++  +  N     +  +F  M  LG
Sbjct: 82  LSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLG 141

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQK 229
              +EF+L + + A  ++ +   G Q+H   +K    S    HL   NA++ +Y + G  
Sbjct: 142 TAPDEFALGSAVRACAELGDLGLGRQVHAQAIK----SDNGGHLIVQNALVTMYSKSGSV 197

Query: 230 LDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQ-INEYTMINLLSS 285
            D   +F+ I + D+ SW   IA  A  G E  A  +F+++        NE+   ++  +
Sbjct: 198 GDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRA 257

Query: 286 VGGE-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                  L  G+QI   C K         G +L  MY +C +++ A  +F  +   D VS
Sbjct: 258 CSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVS 317

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WNS+I  +S +G  ++A+ +F  M   SL P+G T+ ++L A     +L+Q   +HS+++
Sbjct: 318 WNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLV 377

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K G   D  + + LI+ Y +C     +  V  E + ++ V  N++ +  V      +  +
Sbjct: 378 KLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFK 437

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+R +  S   ++  + + VL A A +   E  K +H  A K     D  + +A+ID Y 
Sbjct: 438 LFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYA 497

Query: 525 KCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           KCG+++DA + F  +   RD  + W+++++GYAQ G   E  +LF +M   GVKP+ +T+
Sbjct: 498 KCGSLDDANKLFEIMGTGRDVFS-WSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTF 556

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           + VL +C   GLV E   Y S M   +G++P  EH +C++DLL R G L  A   +DQMP
Sbjct: 557 VGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMP 616

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
             PD  +W +LL+A   + ++++G  A   +L + P + + YVLL N+YAS+G WN+  +
Sbjct: 617 FEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFAR 676

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           L+K+M+   + K PG SWI + G    F   D SH +S E+Y  L
Sbjct: 677 LKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTML 721



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 270/564 (47%), Gaps = 28/564 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRL 72
           + ILS  LI+ + + A    A R +FD   +R+ +++ A+I+  A+  +   A+ LF  +
Sbjct: 79  NTILSNHLITMYGRCAAPDSA-RMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM 137

Query: 73  RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              G  PD F   S V+AC   G L     VH   +K      + + +  +  Y+KSG +
Sbjct: 138 LRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSV 197

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVLGA 188
                 F    D D  ++ +++ G    G    +  +F EM + G+   NEF   +V  A
Sbjct: 198 GDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRA 257

Query: 189 SFDV----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
              V    + GEQIHG  VK        ++   ++ ++Y RC +   A+K+F  I  PD+
Sbjct: 258 CSVVINSLEYGEQIHGLCVKYKLDRN--SYAGCSLGDMYARCNKLDSAMKVFYRIESPDL 315

Query: 245 VSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  I A + DG+  EA  LF ++R++  + +  T++ LL +  G   LR G+ I ++
Sbjct: 316 VSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSY 375

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K+G    V + N+LISMY +C     A  +F     +D V+WNS++    ++      
Sbjct: 376 LVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDV 435

Query: 362 LDMFCHMLEFSLIP--NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
             +F   L  S +P  +  ++ ++L A +     + A QVH++  K G + D  + + LI
Sbjct: 436 FKLF--RLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALI 493

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLV-YASC--HAEALELYRTIWGSCREV 476
            TY KC +L+++ ++   +     V   + +S++V YA      EAL+L+  +     + 
Sbjct: 494 DTYAKCGSLDDANKLFEIMGTGRDVF--SWSSLIVGYAQFGYAKEALDLFARMRNLGVKP 551

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
           N  TF  VL AC+ +  +++G   + + ++  Y      E  S VID+  + G + +A +
Sbjct: 552 NHVTFVGVLIACSRVGLVDEGCYYYSI-MEPEYGIVPTKEHCSCVIDLLARAGRLSEAAK 610

Query: 535 AFRKIC-RDSLAGWNAMMMGYAQH 557
              ++     +  WN ++     H
Sbjct: 611 FVDQMPFEPDIIMWNTLLAASRTH 634



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 171/369 (46%), Gaps = 26/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L +K     +     +L   + +      A +  +  ++ D++++N+LI+  +   
Sbjct: 270 QIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADG 329

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF  +RY  L+PD  T  +L+ A   C +L++   +H   +KLG    V + +
Sbjct: 330 LLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCN 389

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y +  +  SA   F +  D D V + +++   V +   +   ++F  + S    L
Sbjct: 390 SLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSL 449

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL  VL AS ++   +  +Q+H +  KVG +S     L+NA+++ Y +CG   DA K
Sbjct: 450 DRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAI--LSNALIDTYAKCGSLDDANK 507

Query: 235 MFDEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F+ + T  DV SWS  I          EA  LF  +R    + N  T + +L +     
Sbjct: 508 LFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVG 567

Query: 291 ILRAGKQIQAFCYKVGFME----VVSIG---NALISMYGKCGQVNDARSIFDYLIFK-DS 342
           ++  G      CY    ME    +V      + +I +  + G++++A    D + F+ D 
Sbjct: 568 LVDEG------CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDI 621

Query: 343 VSWNSMIAG 351
           + WN+++A 
Sbjct: 622 IMWNTLLAA 630



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 9/261 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S L+K G   D ++  +LIS +T+  DF  A     +T +RD++T+N++++   +   
Sbjct: 372 IHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRH 431

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
                KLF  L       D  + ++++ A   L   E+   VH    K+G  S   L + 
Sbjct: 432 MEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNA 491

Query: 119 FIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G +  A   F       D  ++++++ GY   G   ++ ++F  MR+LG++ 
Sbjct: 492 LIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKP 551

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL A      V EG   +        +     H  + +++L  R G+  +A K
Sbjct: 552 NHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHC-SCVIDLLARAGRLSEAAK 610

Query: 235 MFDEIT-EPDVVSWSERIAAA 254
             D++  EPD++ W+  +AA+
Sbjct: 611 FVDQMPFEPDIIMWNTLLAAS 631


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 178/534 (33%), Positives = 298/534 (55%), Gaps = 11/534 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAA 253
           G QIH   +K G        + N+++ LY + G    +  K+FD +   DV+SW+  I+ 
Sbjct: 78  GLQIHAHVIKSGL--EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISG 135

Query: 254 ---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                  + +  LF  +     + N +T+  ++ +      L+ G+         GF   
Sbjct: 136 YVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSN 195

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-L 369
             I +ALI M+G+   ++DAR +FD L+  D++ W S+I+  + N FF++AL  F  M  
Sbjct: 196 YVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQR 255

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  + P+G+T  ++L A  N   LKQ  +VH+ +I +GF  +  + S L+  YGKC ++ 
Sbjct: 256 DHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVG 315

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           ES+R+   +  KN+V  +AL             ++++R +     +V+   F  +L+ CA
Sbjct: 316 ESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCA 371

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  + QGK +HC  ++    +D+ VESA++D+Y KCG IE A+  F ++   +L  WN+
Sbjct: 372 GLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNS 431

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ G+AQ+G   E   +FN+M K G+KPD I+++ +L +C H GLV E R Y   M+  +
Sbjct: 432 MIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDY 491

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G+   +EHY+C+VDLLGR GLLE A++ I+      D+ +W +LL ACT   N ++    
Sbjct: 492 GIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERI 551

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
             +++EL+PD   +YVLL+N+Y + G WND  ++R+ MK++ + K PG SWI  
Sbjct: 552 AKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIET 605



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 237/454 (52%), Gaps = 18/454 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHF----TKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           QI++ +IK+G   D  +  +L++ +    T F + R+ F  LF    +D+I++ ++ISG 
Sbjct: 80  QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLF---VKDVISWTSMISGY 136

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
            R  +   +L+LF ++   G+ P+AFT S+++KAC   G L+   I HGV L  GF S  
Sbjct: 137 VRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY 196

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RS 172
            + S  I+ + ++  +  A   F + L+ D + +T+++     N  FD++   F  M R 
Sbjct: 197 VIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRD 256

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  + F+   VL A  +   +K+G+++H   +  GF   V   + ++++++Y +CG  
Sbjct: 257 HGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV--VESSLVDMYGKCGSV 314

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++ ++FD +   + VSWS  +   C   +   + +  R  + +++ Y    +L +  G 
Sbjct: 315 GESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME-KVDLYCFGTILRTCAGL 373

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             +R GK++     + G    V + +AL+ +Y KCG +  A++IFD +  ++ ++WNSMI
Sbjct: 374 AAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 433

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
            G+++NG   +AL +F  M++  + P+  +   IL A S+   + +  +    + K  G 
Sbjct: 434 GGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGI 493

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
            +     SC++   G+   L E++ ++   D ++
Sbjct: 494 KVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD 527



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 155/327 (47%), Gaps = 4/327 (1%)

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           S+   L   D+ +  S I    ++G  + AL +   +    +       AS+L+  +   
Sbjct: 14  SLLTPLNLSDNTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVL 73

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALA 450
           +    +Q+H+H+IKSG   D  + + L+T Y K      E+++V   +  K+ +   ++ 
Sbjct: 74  AFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMI 133

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S  V       +LEL+  +     E N  T S V+KAC+ + DL+ G+  H + L   +D
Sbjct: 134 SGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFD 193

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            +  + SA+IDM+ +   ++DA++ F ++       W +++    ++  + E    F  M
Sbjct: 194 SNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSM 253

Query: 571 SK-FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
            +  G+ PD  T+  VLT+C + G +++ +  +       G    +   + +VD+ G+ G
Sbjct: 254 QRDHGMCPDGFTFGTVLTACGNLGRLKQGKE-VHAKVITTGFCGNVVVESSLVDMYGKCG 312

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +  ++   D+MPI  ++  W +LL  
Sbjct: 313 SVGESQRIFDRMPI-KNSVSWSALLGG 338



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 171/361 (47%), Gaps = 20/361 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + +++  G   + ++++ LI    +      A +   +    D I + ++IS L R    
Sbjct: 184 HGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFF 243

Query: 63  GPALKLFDRL-RYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
             AL+ F  + R  G+ PD FTF +++ ACG+L   ++ + VH   +  GF   V + S 
Sbjct: 244 DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESS 303

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G +  ++  F      ++V+++A++ GY  NG+F    ++F +M  + L   
Sbjct: 304 LVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCF 363

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
              L    G +  V++G+++H   ++ G    V   + +A+++LY +CG    A  +FD+
Sbjct: 364 GTILRTCAGLA-AVRQGKEVHCQYIRKGGWRDVI--VESALVDLYAKCGCIEYAQTIFDQ 420

Query: 239 ITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   ++++W+  I   A    G EA  +F  +     + +  + I +L +     ++  G
Sbjct: 421 MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEG 480

Query: 296 KQ-----IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           ++      + +  KVG        + ++ + G+ G + +A  + +   F+D  S W +++
Sbjct: 481 REYFISMTKDYGIKVGIEHY----SCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 536

Query: 350 A 350
            
Sbjct: 537 G 537


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 186/551 (33%), Positives = 297/551 (53%), Gaps = 38/551 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A   D V A  L+  +       N Y+   LL S   
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ---------------------- 326
            + L  G+QI     K+G+   + +  +LISMY + G+                      
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 327 ---------VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                    +N+AR +FD +  KD VSWN+MI+GY E   F +AL+++  M++ ++ P+ 
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM +++ A + S S++   Q+HS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + KK+ +  N L     + + + EAL L++ +  S    N  T   VL ACA +  ++ G
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +    + S +IDMY KCG IE AK+ F  +   SL+ WNAM+ G+
Sbjct: 318 RWIHVYINKRLKGVTNASSLLTS-LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG  +   +LF+KM K G+ PD+IT++ +L++C H+G++   R     MS  + + P+
Sbjct: 377 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK 436

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + AK  I  MP+ PD  IW SLL AC ++ N++LG      L+
Sbjct: 437 LEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLI 496

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P+N  +YVLLSN+YA+AG W+ V K+R  + +K + K PG S I +    H F  GD
Sbjct: 497 KIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGD 556

Query: 735 SSHSQSKEIYK 745
             H +++EIY+
Sbjct: 557 KFHPRNREIYR 567



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 212/448 (47%), Gaps = 58/448 (12%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---S 93
           +F+T Q  +++ +N +  G A    S  ALKL+  +   GL P++++F  L+K+C    +
Sbjct: 21  IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L E + +HG  LKLG+   +Y+ +  I  YA++G +  A   F        V+YTA++ G
Sbjct: 81  LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140

Query: 154 YV----------------------WNG---------EFDKSKEVFVEMRSLGLELNEFSL 182
           Y                       WN           F ++ E++ +M    ++ +E ++
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200

Query: 183 TAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
             V+ A   S  ++ G Q+H +    GF S +   + N +++LY +CG+   A  +F  +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNI--KIVNVLIDLYSKCGEVETACGLFQGL 258

Query: 240 TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
            + DV+SW+  I          EA  LF+++  +    N+ TM+++L +      +  G+
Sbjct: 259 AKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 318

Query: 297 QIQAFCYK--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            I  +  K   G     S+  +LI MY KCG +  A+ +FD ++ +   SWN+MI G++ 
Sbjct: 319 WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +G  N A D+F  M +  + P+  T   +L A S+S  L     +  HI +S  +  D  
Sbjct: 379 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGML----DLGRHIFRS--MSQDYK 432

Query: 415 IS-------CLITTYGKCNALNESKRVL 435
           I+       C+I   G C    E+K ++
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMI 460



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 204/433 (47%), Gaps = 42/433 (9%)

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGV 203
           +  M  G+  N +   + +++V M SLGL  N +S   +L +    K   EG+QIHG  +
Sbjct: 33  WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDA------------------------------- 232
           K+G+   +  ++N +++++Y + G+  DA                               
Sbjct: 93  KLGY--DLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNA 150

Query: 233 VKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+FDEI+  DVVSW+  I+     C+  EA  L+KD+   + + +E TM+ ++S+    
Sbjct: 151 RKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQS 210

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             +  G+Q+ ++    GF   + I N LI +Y KCG+V  A  +F  L  KD +SWN++I
Sbjct: 211 GSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLI 270

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK--SG 407
            G++    + +AL +F  ML     PN  TM S+L A ++  ++     +H +I K   G
Sbjct: 271 GGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKG 330

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
                S+++ LI  Y KC  +  +K+V   +  ++    NA+            A +L+ 
Sbjct: 331 VTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFS 390

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI-HCLALKARYDQDIFVESAVIDMYCKC 526
            +  +  + +  TF  +L AC+    L+ G+ I   ++   +    +     +ID+   C
Sbjct: 391 KMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHC 450

Query: 527 GTIEDAKRAFRKI 539
           G  ++AK   R +
Sbjct: 451 GLFKEAKEMIRTM 463



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 180/395 (45%), Gaps = 50/395 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFT---KFADFRRAF---------------------- 35
           QI+  ++K G+ LD  ++T+LIS +    +  D  + F                      
Sbjct: 86  QIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRG 145

Query: 36  -----RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK 89
                R LFD  + +D++++NA+ISG    C    AL+L+  +    ++PD  T  ++V 
Sbjct: 146 YINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVS 205

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC   GS++    +H      GF S + +V+  I+ Y+K GE+ +A   F+     D ++
Sbjct: 206 ACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVIS 265

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
           +  ++ G+     + ++  +F EM   G   N+ ++ +VL A     + D+  G  IH +
Sbjct: 266 WNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI--GRWIHVY 323

Query: 202 GVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
             K   L GV N   L  +++++Y +CG    A ++FD +    + SW+  I   A    
Sbjct: 324 INKR--LKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGK 381

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGN 315
              AF LF  +R N    ++ T + LLS+     +L  G+ I ++          +    
Sbjct: 382 ANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYG 441

Query: 316 ALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
            +I + G CG   +A+ +   +  + D V W S++
Sbjct: 442 CMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 10/262 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +  +G   +  +   LI  ++K  +   A         +D+I++N LI G     
Sbjct: 218 QLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMN 277

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL-----GFSSRVYL 115
               AL LF  +   G  P+  T  S++ AC  L   +I   + + +     G ++   L
Sbjct: 278 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSL 337

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           ++  I+ YAK G+I +A+  F   L     ++ AM+ G+  +G+ + + ++F +MR  G+
Sbjct: 338 LTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGI 397

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + ++ +   +L A   S  +  G  I     +   ++    H    +++L   CG   +A
Sbjct: 398 DPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY-GCMIDLLGHCGLFKEA 456

Query: 233 VKMFDEIT-EPDVVSWSERIAA 253
            +M   +  EPD V W   + A
Sbjct: 457 KEMIRTMPMEPDGVIWCSLLKA 478


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 212/761 (27%), Positives = 393/761 (51%), Gaps = 26/761 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+    H +P+ ST L+  +++    + +    +   + D   ++ LI       
Sbjct: 19  QLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNH 78

Query: 61  QSGPALKLFDRLRYQGLRPD---AFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
                L LF+     G +     AF + S+++A    G L     +HG  LK GF     
Sbjct: 79  LFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRV 138

Query: 115 LVSGFIENYA-----KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           + +  +  Y      +  + V  EMC RD      V +++++  YV NG + +  E+F  
Sbjct: 139 IGTSLVGMYGELCFLRDAKKVFDEMCVRDL-----VLWSSIISCYVENGVYREGLEMFRS 193

Query: 170 MRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M   G+  +   L +V  A   +   +  + +HG+ ++ G +      L+N+++ +Y +C
Sbjct: 194 MICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGD--GSLSNSLIVMYSQC 251

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLL 283
           G    A ++F+ I +     W+  I+A        EA  +F  ++ ++ + N+ TMI++L
Sbjct: 252 GYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVL 311

Query: 284 SSVGGERILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +S      L+ GK +  F  +    +  + +G ALI  Y  C +++    +   +  ++ 
Sbjct: 312 NSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENI 371

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN++I+ Y+  G  ++A+  F  M+   ++P+ +++AS + A ++S S++   Q+H H
Sbjct: 372 VSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGH 431

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           ++K GF  D+ + + L+  Y KC   + +  + ++I  K+ V  N +           EA
Sbjct: 432 VMKRGFF-DEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEA 490

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           L L+  ++ +  E+N  TF   ++AC+ +  L++GK IH   +      D+++++A++DM
Sbjct: 491 LSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDM 550

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG ++ A++ F  I   S+  W+ M+  +  HG  +  ++LF+KM    +KP+E+T+
Sbjct: 551 YAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTF 610

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           + +L++C HAG V+E + Y + M D +G++P +EH+A IVDLL R G + GA   I  + 
Sbjct: 611 MNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIR 670

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
            P  A IW +LL+ C IYG +D+      +L  +  D+   Y LLSN+YA  G W +  K
Sbjct: 671 TPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRK 730

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           +R +M+   L K PGYS + +    + F +GD+S  Q KEI
Sbjct: 731 VRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEI 771



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 147/614 (23%), Positives = 296/614 (48%), Gaps = 18/614 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           +  L + C +L+    +H   +     +     +  +E+Y++ G + S+ + F      D
Sbjct: 4   YMPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPD 63

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE---FSLTAVLGASFDVKE---GEQ 197
           +  ++ ++  ++WN  F +   +F     +G +L +   F   +V+ A   V E   G +
Sbjct: 64  SFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRK 123

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
           +HG  +K GF       +  +++ +Y       DA K+FDE+   D+V WS  I+   + 
Sbjct: 124 LHGRILKSGFCEDRV--IGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVEN 181

Query: 257 GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
           GV  E   +F+ +     + +   ++++  + G    LR  K +  +  + G +   S+ 
Sbjct: 182 GVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLS 241

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+LI MY +CG +  A+ +F+ +  + +  W SMI+ Y++N  F +ALD+F  M +  + 
Sbjct: 242 NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVE 301

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCNALNESKR 433
           PN  TM S+L + +    LK+   VH  ++++   +    +   LI  Y  C  ++  ++
Sbjct: 302 PNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEK 361

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           +L  I  +N V  N L S       + EA+  +  +       +  + +  + A A+   
Sbjct: 362 LLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGS 421

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           ++ G+ IH   +K  +  D FV+++++DMY KCG    A   F KI   S+  WN M+ G
Sbjct: 422 IQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICG 480

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           ++Q+G   E  +LF++M K  ++ +++T+L+ + +C + G + + + ++     + G   
Sbjct: 481 FSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGK-WIHHKIIVTGNQN 539

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGS 671
            L     +VD+  + G L+ A+   D + +      W ++++A  I+G I+    L    
Sbjct: 540 DLYIDTALVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAAHGIHGQINAATSLFHKM 598

Query: 672 KLLELQPDNESTYV 685
            L  ++P NE T++
Sbjct: 599 VLSNIKP-NEVTFM 611


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 166/472 (35%), Positives = 273/472 (57%), Gaps = 2/472 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++L+    +  +R G+++ A   K  +   V +   LI +Y KC  + DAR + D +  +
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW +MI+GYS+ G+ ++AL +F  ML     PN +T A++L + ++S   +   Q+H
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           S +IK+ F     + S L+  Y K   + E++RV   + +++ V   A+ S         
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL+L+R +       N  T++ VL A + +  L+ G+ +H   L+A+    + +++++I
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDE 579
           DMY KCG++  ++R F  +   ++  WNAM++GY++HG   E   LF  M +   VKPD 
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314

Query: 580 ITYLAVLTSCCHAGLV-REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           +T+LAVL+ C H G+  R    +   ++   G  P++EHY C+VDL GR G +E A   I
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
            +MP  P A IW SLL AC ++ N+ +G     +LLE++ +N   YV+LSNLYASAG W+
Sbjct: 375 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 434

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           DV  +R+ MKEK + KEPG SWI +    H F+A D SH + +E++ ++ +L
Sbjct: 435 DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVREL 486



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 193/380 (50%), Gaps = 15/380 (3%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           ++EG+++H   +K  +   V  +L   ++ LY +C    DA ++ DE+ E +VVSW+  I
Sbjct: 26  IREGQRVHAHMIKTCYEPPV--YLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMI 83

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         EA  LF ++  +    NE+T   +L+S       + G+QI +   K  F 
Sbjct: 84  SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 143

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + +G++L+ MY K G++ +AR +FD L  +D VS  ++I+GY++ G   +ALD+F  +
Sbjct: 144 SHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 203

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               +  N  T AS+L A+S   +L    QVHSH++++       + + LI  Y KC +L
Sbjct: 204 QREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSL 263

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHA---EALELYRTIWGSCR-EVNGSTFSIV 484
             S+R+   + ++  +  NA+   LV  S H    EA+EL++ +    + + +  TF  V
Sbjct: 264 TYSRRIFDSMPERTVISWNAM---LVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAV 320

Query: 485 LKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
           L  C+     ++G  I    +  K  ++ +I     V+D++ + G +E+A    +K+  +
Sbjct: 321 LSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFE 380

Query: 543 SLAG-WNAMMMGYAQHGCYH 561
             A  W +++     H   H
Sbjct: 381 PTAAIWGSLLGACRVHQNVH 400



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 199/399 (49%), Gaps = 16/399 (4%)

Query: 75  QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           QGL  +   + S++  C S   ++E + VH   +K  +   VYL +  I  Y K   +  
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GA 188
           A     +  + + V++TAM+ GY   G   ++  +FVEM   G   NEF+   VL    +
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           S   + G QIH   +K  F S +   + ++++++Y + G+  +A ++FD + E DVVS +
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHI--FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCT 181

Query: 249 ERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I+         EA  LF+ L+    + N  T  ++L+++ G   L  G+Q+ +   + 
Sbjct: 182 AIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA 241

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                V + N+LI MY KCG +  +R IFD +  +  +SWN+M+ GYS++G   +A+++F
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 301

Query: 366 CHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII--KSGFLLDDSMISCLITTY 422
             M E + + P+  T  ++L   S+     + +++   ++  K GF  +     C++  +
Sbjct: 302 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLF 361

Query: 423 GKCNALNESKRVLSEI--DKKNAVHINALASVLVYASCH 459
           G+   + E+   + ++  +   A+  + L +  V+ + H
Sbjct: 362 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH 400



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 177/364 (48%), Gaps = 15/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ +IK  +     L T LI  + K      A R L +   R+++++ A+ISG ++  
Sbjct: 31  RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +  AL LF  +   G  P+ FTF++++ +C S    Q    +H + +K  F S +++ S
Sbjct: 91  YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGS 150

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+G+I  A   F    + D V+ TA++ GY   G  +++ ++F  ++  G+  
Sbjct: 151 SLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRS 210

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +  +VL A      +  G Q+H   ++      V   L N+++++Y +CG    + +
Sbjct: 211 NYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVV--LQNSLIDMYSKCGSLTYSRR 268

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR-FNDFQINEYTMINLLSSVGGER 290
           +FD + E  V+SW+  +        G EA  LFK ++  N  + +  T + +LS      
Sbjct: 269 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 328

Query: 291 ILRAGKQI--QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNS 347
           +   G +I  +    K GF   +     ++ ++G+ G+V +A      + F+ + + W S
Sbjct: 329 MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGS 388

Query: 348 MIAG 351
           ++  
Sbjct: 389 LLGA 392



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 13/174 (7%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           EV    +  VL  C + T + +G+ +H   +K  Y+  +++ + +I +Y KC  + DA+R
Sbjct: 7   EVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARR 66

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
              ++   ++  W AM+ GY+Q G   E  +LF +M   G  P+E T+  VLTSC  +  
Sbjct: 67  VLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSG 126

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACI------VDLLGRVGLLEGAKMTIDQMP 642
            +  R        +H L+ +    + I      +D+  + G +  A+   D +P
Sbjct: 127 FQLGR-------QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 178/534 (33%), Positives = 298/534 (55%), Gaps = 11/534 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAA 253
           G QIH   +K G        + N+++ LY + G    +  K+FD +   DV+SW+  I+ 
Sbjct: 137 GLQIHAHVIKSGL--EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISG 194

Query: 254 ---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                  + +  LF  +     + N +T+  ++ +      L+ G+         GF   
Sbjct: 195 YVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSN 254

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-L 369
             I +ALI M+G+   ++DAR +FD L+  D++ W S+I+  + N FF++AL  F  M  
Sbjct: 255 YVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQR 314

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  + P+G+T  ++L A  N   LKQ  +VH+ +I +GF  +  + S L+  YGKC ++ 
Sbjct: 315 DHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVG 374

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           ES+R+   +  KN+V  +AL             ++++R +     +V+   F  +L+ CA
Sbjct: 375 ESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCA 430

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  + QGK +HC  ++    +D+ VESA++D+Y KCG IE A+  F ++   +L  WN+
Sbjct: 431 GLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNS 490

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ G+AQ+G   E   +FN+M K G+KPD I+++ +L +C H GLV E R Y   M+  +
Sbjct: 491 MIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDY 550

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G+   +EHY+C+VDLLGR GLLE A++ I+      D+ +W +LL ACT   N ++    
Sbjct: 551 GIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERI 610

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
             +++EL+PD   +YVLL+N+Y + G WND  ++R+ MK++ + K PG SWI  
Sbjct: 611 AKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIET 664



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 237/454 (52%), Gaps = 18/454 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHF----TKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           QI++ +IK+G   D  +  +L++ +    T F + R+ F  LF    +D+I++ ++ISG 
Sbjct: 139 QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLF---VKDVISWTSMISGY 195

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
            R  +   +L+LF ++   G+ P+AFT S+++KAC   G L+   I HGV L  GF S  
Sbjct: 196 VRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY 255

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RS 172
            + S  I+ + ++  +  A   F + L+ D + +T+++     N  FD++   F  M R 
Sbjct: 256 VIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRD 315

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  + F+   VL A  +   +K+G+++H   +  GF   V   + ++++++Y +CG  
Sbjct: 316 HGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV--VESSLVDMYGKCGSV 373

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++ ++FD +   + VSWS  +   C   +   + +  R  + +++ Y    +L +  G 
Sbjct: 374 GESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME-KVDLYCFGTILRTCAGL 432

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             +R GK++     + G    V + +AL+ +Y KCG +  A++IFD +  ++ ++WNSMI
Sbjct: 433 AAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 492

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
            G+++NG   +AL +F  M++  + P+  +   IL A S+   + +  +    + K  G 
Sbjct: 493 GGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGI 552

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
            +     SC++   G+   L E++ ++   D ++
Sbjct: 553 KVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD 586



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 142/289 (49%), Gaps = 6/289 (2%)

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-L 428
           E S  P  Y  AS+L+  +   +    +Q+H+H+IKSG   D  + + L+T Y K     
Sbjct: 113 EISAKPVLY--ASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDF 170

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E+++V   +  K+ +   ++ S  V       +LEL+  +     E N  T S V+KAC
Sbjct: 171 PETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKAC 230

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           + + DL+ G+  H + L   +D +  + SA+IDM+ +   ++DA++ F ++       W 
Sbjct: 231 SELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWT 290

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSK-FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           +++    ++  + E    F  M +  G+ PD  T+  VLT+C + G +++ +  +     
Sbjct: 291 SIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKE-VHAKVI 349

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
             G    +   + +VD+ G+ G +  ++   D+MPI  ++  W +LL  
Sbjct: 350 TTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPI-KNSVSWSALLGG 397



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 171/361 (47%), Gaps = 20/361 (5%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + +++  G   + ++++ LI    +      A +   +    D I + ++IS L R    
Sbjct: 243 HGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFF 302

Query: 63  GPALKLFDRL-RYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
             AL+ F  + R  G+ PD FTF +++ ACG+L   ++ + VH   +  GF   V + S 
Sbjct: 303 DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESS 362

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G +  ++  F      ++V+++A++ GY  NG+F    ++F +M  + L   
Sbjct: 363 LVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCF 422

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
              L    G +  V++G+++H   ++ G    V   + +A+++LY +CG    A  +FD+
Sbjct: 423 GTILRTCAGLA-AVRQGKEVHCQYIRKGGWRDVI--VESALVDLYAKCGCIEYAQTIFDQ 479

Query: 239 ITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   ++++W+  I   A    G EA  +F  +     + +  + I +L +     ++  G
Sbjct: 480 MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEG 539

Query: 296 KQ-----IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           ++      + +  KVG        + ++ + G+ G + +A  + +   F+D  S W +++
Sbjct: 540 REYFISMTKDYGIKVGIEHY----SCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 595

Query: 350 A 350
            
Sbjct: 596 G 596


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 210/674 (31%), Positives = 340/674 (50%), Gaps = 18/674 (2%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           +L + C +LQ  + +H   +       V + +  +  Y   G +  A   F    + D  
Sbjct: 59  TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118

Query: 146 AYTAMVCGYVWNGEFDKSKEVF----VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGF 201
           A+  M+ GY   G    S EV     + M S GL  +  +  +VL A   V +G +IH  
Sbjct: 119 AWNLMISGY---GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
            +K GF+  V  ++  ++++LY R     +A  +FDE+   D+ SW+  I+  C   +  
Sbjct: 176 ALKFGFMWDV--YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA  L   LR  D      T+++LLS+         G  I ++  K G    + + N LI
Sbjct: 234 EALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            +Y + G++ D + +FD +  +D +SWNS+I  Y  N    +A+ +F  M    + P+  
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSE 437
           T+ S+   +S    ++    V    ++ G+ L+D  I + ++  Y K   ++ ++ V + 
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQ 496
           +   + +  N + S        +EA+E+Y  +        N  T+  VL AC+    L Q
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G  +H   LK     D+FV +++ DMY KCG +EDA   F +I R +   WN ++  +  
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           HG   +   LF +M   GVKPD IT++ +L++C H+GLV E +     M   +G+ P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY C+VD+ GR G LE A   I  M + PDA IW +LLSAC ++GN+DLG +A   L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
           +P++   +VLLSN+YASAG W  V ++R     K L K PG+S + V      FY G+ +
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709

Query: 737 HSQSKEIYKELIKL 750
           H   +E+Y+EL  L
Sbjct: 710 HPMYEEMYRELTAL 723



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 295/568 (51%), Gaps = 26/568 (4%)

Query: 36  RFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGS 93
           R  FD  QNRD+  +N +ISG  R   S   ++ F   +   GL PD  TF S++KAC +
Sbjct: 106 RHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT 165

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           + +   +H + LK GF   VY+ +  I  Y++   + +A + F +    D  ++ AM+ G
Sbjct: 166 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
           Y  +G   ++  +   +R++   +   SL +    + D   G  IH + +K G  S +  
Sbjct: 226 YCQSGNAKEALTLSNGLRAMD-SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-- 282

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFN 270
            ++N +++LY   G+  D  K+FD +   D++SW+  I A       + A  LF+++R +
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVND 329
             Q +  T+I+L S +     +RA + +Q F  + G F+E ++IGNA++ MY K G V+ 
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVS 388
           AR++F++L   D +SWN++I+GY++NGF ++A++M+  M E   I  N  T  S+L A S
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
            + +L+Q M++H  ++K+G  LD  +++ L   YGKC  L ++  +  +I + N+V  N 
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           L +   +     +A+ L++ +     + +  TF  +L AC+    +++G+   C  +  +
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ--WCFEM-MQ 579

Query: 509 YDQDIFVE----SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEV 563
            D  I         ++DMY + G +E A +  + +     A  W A++     HG     
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD-- 637

Query: 564 SNLFNKMSK---FGVKPDEITYLAVLTS 588
                K++    F V+P+ + Y  +L++
Sbjct: 638 ---LGKIASEHLFEVEPEHVGYHVLLSN 662



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 226/457 (49%), Gaps = 32/457 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+ L +K G   D  ++ +LI  ++++     A R LFD    RD+ ++NA+ISG   +
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA-RILFDEMPVRDMGSWNAMISG---Y 226

Query: 60  CQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
           CQSG    AL L + LR      D+ T  SL+ AC   G       +H   +K G  S +
Sbjct: 227 CQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  I+ YA+ G +   +  F      D +++ +++  Y  N +  ++  +F EMR  
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342

Query: 174 GLE---LNEFSLTAVLGASFDVKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQK 229
            ++   L   SL ++L    D++    + GF ++ G FL  +   + NA++ +Y + G  
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT--IGNAVVVMYAKLGLV 400

Query: 230 LDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
             A  +F+ +   DV+SW+  I+       A + +E + + ++    +   N+ T +++L
Sbjct: 401 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE--GEIAANQGTWVSVL 458

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            +      LR G ++     K G    V +  +L  MYGKCG++ DA S+F  +   +SV
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
            WN++IA +  +G   +A+ +F  ML+  + P+  T  ++L A S+S  + +  Q    +
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QWCFEM 577

Query: 404 IKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           +++ + +  S+    C++  YG+   L  + + +  +
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 188/419 (44%), Gaps = 35/419 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S  IK+G   +  +S  LI  + +F   R   +       RD+I++N++I       Q
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328

Query: 62  SGPALKLFDRLRYQGLRPDAFT---FSSLVKACGSLQENEIVHGVCLKLG-FSSRVYLVS 117
              A+ LF  +R   ++PD  T    +S++   G ++    V G  L+ G F   + + +
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LE 176
             +  YAK G + SA   F    + D +++  ++ GY  NG   ++ E++  M   G + 
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N+ +  +VL A   +  +++G ++HG  +K G    V   +  ++ ++Y +CG+  DA+
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV--FVVTSLADMYGKCGRLEDAL 506

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFG-----LFKDLRFNDFQINEYTMINLLSSVGG 288
            +F +I   + V W+  I  AC G    G     LFK++     + +  T + LLS+   
Sbjct: 507 SLFYQIPRVNSVPWNTLI--ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564

Query: 289 ERILRAGKQIQAFCYKV-----GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DS 342
             ++  G+    +C+++     G    +     ++ MYG+ GQ+  A      +  + D+
Sbjct: 565 SGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFS--------LIPNGYTMASILEAVSNSKSL 393
             W ++++    +G  +       H+ E          L+ N Y  A   E V   +S+
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 183/568 (32%), Positives = 302/568 (53%), Gaps = 6/568 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           ++ +G+Q+H   ++ G L      L+N  +NLY +CG+    +K+FD++++ ++VSW+  
Sbjct: 90  ELNKGKQLHAMLIRGGCLPNT--FLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSI 147

Query: 251 IAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EA   F  +R       ++ + ++L +      ++ G Q+     K GF
Sbjct: 148 ITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGF 207

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              + +G+ L  MY KCG+++DA   F+ +  KD+V W SMI G+ +NG F +AL  +  
Sbjct: 208 GCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMK 267

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M+   +  + + + S L A S  K+      +H+ I+K GF  +  + + L   Y K   
Sbjct: 268 MVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGD 327

Query: 428 LNESKRVLS-EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           +  +  V     D  + V + A+    V      +AL  +  +     E N  TF+ ++K
Sbjct: 328 MVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIK 387

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACA    LE G  +H   +K  + +D FV S ++DMY KCG  + + + F +I       
Sbjct: 388 ACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIA 447

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN ++  ++QHG        FN M   G+KP+ +T++ +L  C HAG+V +   Y S M 
Sbjct: 448 WNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSME 507

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            ++G++P+ EHY+C++DLLGR G L+ A+  I+ MP  P+   W S L AC I+G+++  
Sbjct: 508 KIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA 567

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
             A  KL++L+P+N   +VLLSN+YA    W DV  LRK +K+  + K PGYSW+ +   
Sbjct: 568 KFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNK 627

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHM 754
           TH F   D SH Q KEIY++L  L + +
Sbjct: 628 THVFGVEDWSHPQKKEIYEKLDNLLDQI 655



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 223/452 (49%), Gaps = 19/452 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++++LI+ G   +  LS   ++ ++K  +     +       R+++++ ++I+G A   
Sbjct: 96  QLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNS 155

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL  F ++R +G     F  SS+++AC   G++Q    VH + +K GF   +++ S
Sbjct: 156 RFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGS 215

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              + Y+K GE+  A   F +    D V +T+M+ G+V NG+F K+   +++M +  + +
Sbjct: 216 NLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFI 275

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++  L + L A   +K    G+ +H   +K+GF       + NA+ ++Y + G  + A  
Sbjct: 276 DQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET--FIGNALTDMYSKSGDMVSASN 333

Query: 235 MFDEITEPDVVSWSERIAAACDGV-------EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +F      D +S    + A  DG        +A   F DLR    + NE+T  +L+ +  
Sbjct: 334 VFQ--IHSDCISIVS-LTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACA 390

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            +  L  G Q+     K  F     + + L+ MYGKCG  + +  +FD +   D ++WN+
Sbjct: 391 NQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNT 450

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-S 406
           ++  +S++G    A++ F  M+   L PN  T  ++L+  S++  ++  +   S + K  
Sbjct: 451 LVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIY 510

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           G +  +   SC+I   G+   L E++  ++ +
Sbjct: 511 GVVPKEEHYSCVIDLLGRAGKLKEAEDFINNM 542



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 222/482 (46%), Gaps = 27/482 (5%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L + + +H + ++ G     +L + F+  Y+K GE+      F      + V++T+++ G
Sbjct: 91  LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITG 150

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSG 210
           +  N  F ++   F +MR  G    +F+L++VL A      ++ G Q+H   VK GF  G
Sbjct: 151 FAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGF--G 208

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDL 267
               + + + ++Y +CG+  DA K F+E+   D V W+  I       D  +A   +  +
Sbjct: 209 CELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKM 268

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
             +D  I+++ + + LS+    +    GK + A   K+GF     IGNAL  MY K G +
Sbjct: 269 VTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDM 328

Query: 328 NDARSIFDYLIFKDS---VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             A ++F   I  D    VS  ++I GY E     +AL  F  +    + PN +T  S++
Sbjct: 329 VSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLI 386

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +A +N   L+   Q+H  ++K  F  D  + S L+  YGKC   + S ++  EI+  + +
Sbjct: 387 KACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEI 446

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG------- 497
             N L  V         A+E +  +     + N  TF  +LK C+    +E G       
Sbjct: 447 AWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSM 506

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQ 556
           + I+ +  K  +       S VID+  + G +++A+     +    ++ GW + +     
Sbjct: 507 EKIYGVVPKEEH------YSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKI 560

Query: 557 HG 558
           HG
Sbjct: 561 HG 562



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 219/458 (47%), Gaps = 24/458 (5%)

Query: 256 DGVE---AFGLFKDLRFNDFQINEY-TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
           +GVE   +F   K+L  +  ++++  T+ +L+ +    + L  GKQ+ A   + G +   
Sbjct: 51  EGVEEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNT 110

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + N  +++Y KCG+++    +FD +  ++ VSW S+I G++ N  F +AL  FC M   
Sbjct: 111 FLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIE 170

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
             I   + ++S+L+A ++  +++   QVH  ++K GF  +  + S L   Y KC  L+++
Sbjct: 171 GEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDA 230

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +   E+  K+AV   ++    V      +AL  Y  +      ++       L AC+A+
Sbjct: 231 CKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSAL 290

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD--SLAGWNA 549
                GK++H   LK  ++ + F+ +A+ DMY K G +  A   F+ I  D  S+    A
Sbjct: 291 KASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQ-IHSDCISIVSLTA 349

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++ GY +     +  + F  + + G++P+E T+ +++ +C +   +          S LH
Sbjct: 350 IIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHG-------SQLH 402

Query: 610 GLIPQLEHY------ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY--G 661
           G + +          + +VD+ G+ GL + +    D++   PD   W +L+   + +  G
Sbjct: 403 GQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHGLG 461

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
              +    G     L+P N  T+V L    + AGM  D
Sbjct: 462 RNAIETFNGMIHRGLKP-NAVTFVNLLKGCSHAGMVED 498


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 233/753 (30%), Positives = 379/753 (50%), Gaps = 56/753 (7%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVC 104
           ++ T   L+SG AR  +   A ++FD +   G+R +   ++++V     +Q  +I     
Sbjct: 94  NLRTGTILLSGYARAGRVRDARRVFDGM---GVR-NTVAWNAMVTCY--VQNGDITLARK 147

Query: 105 LKLGFSSR-VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
           L     SR V   +  +  Y  S  +  A   F    + + V++T M+ GYV   +  ++
Sbjct: 148 LFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRA 207

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDV-KEG--EQIHGFGVKVGFLSGVCNHLNNAIM 220
            ++F  M   G+   + +L +VL A   + K G  E IH    K GF   V   +  AI+
Sbjct: 208 WDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVV--VGTAIL 265

Query: 221 NLYVRCGQKLD-AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINE 276
           N Y +    LD AVK F+ +   +  +WS  IAA        +AF +++         + 
Sbjct: 266 NGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP-SR 324

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            +M+  L+  G  RI  A    +    ++    VVS  NA+I+ Y +   V++A  +F+ 
Sbjct: 325 TSMLTGLARYG--RIDDA----KILFDQIHEPNVVSW-NAMITGYMQNEMVDEAEDLFNR 377

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           + F++++SW  MIAGY+ NG   QAL     +    ++P+  ++ S   A SN ++L+  
Sbjct: 378 MPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETG 437

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY- 455
            QVHS  +K+G   +  + + LIT YGK  ++   +++   +  K+ V  N+  S LV  
Sbjct: 438 KQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQN 497

Query: 456 ------------------------------ASCHAEALELYRTIWGSCREVNGSTFSIVL 485
                                         A    EA+E++R++       N    +I+L
Sbjct: 498 NLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILL 557

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
                +   + G+ IH +A+K   D  + V +A++ MY KC +  D+ + F  +    + 
Sbjct: 558 GLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIF 616

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN ++ GYAQHG   E   ++  M   GV P+E+T++ +L +C H+GLV E   +   M
Sbjct: 617 TWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSM 676

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           S  +GL P LEHYAC+VDLLGR G ++GA+  I  MPI PD+ IW +LL AC I+ N+++
Sbjct: 677 SSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEI 736

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G  A  KL  ++P N   YV+LSN+Y+S GMW++V K+RK MKE+ + K+PG SW+ +  
Sbjct: 737 GRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKN 796

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
             H F  GD  H Q + IY  L +LY  + AT 
Sbjct: 797 KMHSFVTGDEEHEQIQNIYATLWELYTLLKATG 829



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 201/437 (45%), Gaps = 50/437 (11%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFC 60
           I+ L+ K G   D ++ T +++ +TK  +    A +F      R+  T++ +I+ L++  
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   A  ++ R   + +       + L +  G + + +I+     +    S   +++G++
Sbjct: 305 RIDDAFAVYQRDPLKSVPSRTSMLTGLAR-YGRIDDAKILFDQIHEPNVVSWNAMITGYM 363

Query: 121 EN-YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---GLE 176
           +N      E +   M FR     + +++  M+ GY  NG   +S++  V +++L   G+ 
Sbjct: 364 QNEMVDEAEDLFNRMPFR-----NTISWAGMIAGYARNG---RSEQALVSLQALHRKGML 415

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVG--FLSGVCNHL---------------- 215
            +  SLT+   A  ++   + G+Q+H   VK G  F S VCN L                
Sbjct: 416 PSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQI 475

Query: 216 -----------NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAF 261
                       N+ M+  V+     +A  +F+ +  PDVVSW+  I+A   A  G EA 
Sbjct: 476 FDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAV 535

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            +F+ +       N   +  LL   G     + G+QI     K+G    + + NAL+SMY
Sbjct: 536 EIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMY 595

Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            KC    D+  +FD +  +D  +WN++I GY+++G   +A+ M+  M+   ++PN  T  
Sbjct: 596 FKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFV 654

Query: 382 SILEAVSNSKSLKQAMQ 398
            +L A S+S  + +  Q
Sbjct: 655 GLLHACSHSGLVDEGHQ 671



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 118/571 (20%), Positives = 225/571 (39%), Gaps = 114/571 (19%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           R LF+    R+ +++  +ISG     Q G A  +F  +  +G+ P+     S++ A   L
Sbjct: 177 RNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHL 236

Query: 95  QEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
            +    E +H +  K GF   V + +  +  Y K   ++ + + F + +   N       
Sbjct: 237 GKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARN------- 289

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGV 211
             Y W+                   +   S    +  +F V + + +     +   L+G+
Sbjct: 290 -EYTWS-----------------TIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGL 331

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLR 268
                        R G+  DA  +FD+I EP+VVSW+  I          EA  LF  + 
Sbjct: 332 A------------RYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMP 379

Query: 269 FND----------FQINEYTMINLLSSVGGER---------------------ILRAGKQ 297
           F +          +  N  +   L+S     R                      L  GKQ
Sbjct: 380 FRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQ 439

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + +   K G      + NALI++YGK   +   R IFD +  KD+VS+NS ++   +N  
Sbjct: 440 VHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNL 499

Query: 358 F-------------------------------NQALDMFCHMLEFSLIPNGYTMASILEA 386
           F                               N+A+++F  ML    +PN   +  +L  
Sbjct: 500 FDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGL 559

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAV 444
             N  + +   Q+H+  IK G  +D  ++  + L++ Y KC++  +S +V   +++++  
Sbjct: 560 SGNLGAPQLGQQIHTIAIKLG--MDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIF 616

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             N + +         EA+ +Y+ +  +    N  TF  +L AC+    +++G      +
Sbjct: 617 TWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFF-KS 675

Query: 505 LKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
           + + Y     +E  + ++D+  + G ++ A+
Sbjct: 676 MSSDYGLTPLLEHYACMVDLLGRAGDVQGAE 706



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 148/354 (41%), Gaps = 65/354 (18%)

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF----- 365
            S  +A I   G+ G++++AR +FD + F+D ++WNSMI  Y  NG  +    +      
Sbjct: 33  TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISG 92

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI---------IKSGFL-----LD 411
            ++   +++ +GY  A     V +++ +   M V + +         +++G +     L 
Sbjct: 93  GNLRTGTILLSGYARAG---RVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLF 149

Query: 412 DSMIS-------CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           D+M S        ++T Y     + E++ +   + ++N V    + S  V    H  A +
Sbjct: 150 DAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWD 209

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           ++RT+              VL A   +      ++IH L  K  +++D+ V +A+++ Y 
Sbjct: 210 MFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYT 269

Query: 525 K--------------------------------CGTIEDAKRAFRKICRDSLAGWNAMMM 552
           K                                 G I+DA   +++    S+    +M+ 
Sbjct: 270 KDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLT 329

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           G A++G   +   LF+++     +P+ +++ A++T      +V EA    + M 
Sbjct: 330 GLARYGRIDDAKILFDQIH----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMP 379


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 190/598 (31%), Positives = 318/598 (53%), Gaps = 9/598 (1%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH-- 214
           +G+ +++ E F EM   G+ ++ +S   +  A  +++     HG  +      G+ N   
Sbjct: 59  HGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLS--HGRLLHNRMRMGIENPSV 116

Query: 215 -LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFN 270
            L N ++ +Y  CG   DA K+FDE+++ + VS +  I+A A  G+  +A GLF  +  +
Sbjct: 117 LLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLES 176

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
             +        LL S+   R L  G+QI A   + G     SI   +++MY KCG +  A
Sbjct: 177 GDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGA 236

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           + +FD +  K  V+W  ++ GY++ G    AL +F  ++   +  + +  + +L+A ++ 
Sbjct: 237 KRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASL 296

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           + L+   Q+H+ + K G   + S+ + L+  Y KC++   + R   EI + N V  +A+ 
Sbjct: 297 EELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 356

Query: 451 SVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           S     S   EA++ ++++      V N  T++ + +AC+ + D   G  +H  A+K   
Sbjct: 357 SGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 416

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
               + ESA+I MY KCG ++DA   F  +    +  W A + G+A +G   E   LF K
Sbjct: 417 IGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 476

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M   G+KP+ +T++AVLT+C HAGLV + + YL  M   + + P ++HY C++D+  R G
Sbjct: 477 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSG 536

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
           LL+ A   +  MP  PDA  W+  LS C  + N++LG +AG +L +L P++ + YVL  N
Sbjct: 537 LLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFN 596

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           LY  AG W +  ++ K M E+ L KE   SWI   G  H F  GD  H QS+EIY++L
Sbjct: 597 LYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKL 654



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 246/556 (44%), Gaps = 17/556 (3%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           P++ T   +    +   + +   +  +  +  +    L+S L++  +   A + F  +  
Sbjct: 16  PVIKTANFNQIPSWVSLKSSTSSVKISHKQGQVENLHLVS-LSKHGKLNEAFEFFQEMDK 74

Query: 75  QGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGF-SSRVYLVSGFIENYAKSGEIV 130
            G+    +++  L +AC    SL    ++H   +++G  +  V L +  ++ Y + G + 
Sbjct: 75  AGVSVSLYSYQCLFEACRELRSLSHGRLLHNR-MRMGIENPSVLLQNCVLQMYCECGSLE 133

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A+  F +  DL+ V+ T M+  Y   G  DK+  +F  M   G +      T +L +  
Sbjct: 134 DADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLV 193

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           + +    G QIH   ++ G  S     +   I+N+YV+CG  + A ++FD++     V+W
Sbjct: 194 NPRALDIGRQIHAHVIRAGLCSNA--SIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAW 251

Query: 248 SERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  +     A    +A  LF DL     + + +    +L +      LR GKQI A   K
Sbjct: 252 TGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAK 311

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +G    VS+G  L+  Y KC     A   F  +   + VSW+++I+GY +   F +A+  
Sbjct: 312 LGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKT 371

Query: 365 FCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           F  +  + +++ N +T  SI +A S         QVH+  IK   +      S LIT Y 
Sbjct: 372 FKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYS 431

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  L+++  V   +D  + V   A  S   Y    +EAL L+  +     + N  TF  
Sbjct: 432 KCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIA 491

Query: 484 VLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
           VL AC+    +EQGK  +  +  K      I     +ID+Y + G +++A R  + +  +
Sbjct: 492 VLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFE 551

Query: 543 SLA-GWNAMMMGYAQH 557
             A  W   + G   H
Sbjct: 552 PDAMSWKCFLSGCWTH 567


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 168/523 (32%), Positives = 297/523 (56%), Gaps = 10/523 (1%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD++  P +  W+  I          +A  ++ +++      + +T  +LL +  G
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWN 346
              L+ G+ + A  +++GF   V + N LI++Y KC ++  AR++F+ L   +   VSW 
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++++ Y++NG   +AL++F  M +  + P+   + S+L A +  + LKQ   +H+ ++K 
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G  ++  ++  L T Y KC  +  +K +  ++   N +  NA+ S         EA++++
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311

Query: 467 RTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
             +    ++V   T SI   + ACA +  LEQ ++++    ++ Y  D+F+ SA+IDM+ 
Sbjct: 312 HEMIN--KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG++E A+  F +     +  W+AM++GY  HG   E  +L+  M + GV P+++T+L 
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C H+G+VRE   + + M+D H + PQ +HYAC++DLLGR G L+ A   I  MP+ 
Sbjct: 430 LLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P   +W +LLSAC  + +++LG  A  +L  + P N   YV LSNLYA+A +W+ V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             MKEK L K+ G SW+ V G    F  GD SH + +EI +++
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQV 591



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 221/447 (49%), Gaps = 15/447 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ L+  G      L T LI   + F D   A +   D     I  +NA+I G +R  
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL ++  ++   + PD+FTF  L+KAC     LQ    VH    +LGF + V++ +
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           G I  YAK   + SA   F + L L     V++TA+V  Y  NGE  ++ E+F +MR + 
Sbjct: 159 GLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 175 LELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +  +L +VL A     D+K+G  IH   VK+G    +   L  ++  +Y +CGQ   
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL--EIEPDLLISLNTMYAKCGQVAT 275

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD++  P+++ W+  I+  A +G   EA  +F ++   D + +  ++ + +S+   
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L   + +  +  +  + + V I +ALI M+ KCG V  AR +FD  + +D V W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY  +G   +A+ ++  M    + PN  T   +L A ++S  +++     + +     
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455

Query: 409 LLDDSMISCLITTYGKCNALNESKRVL 435
                  +C+I   G+   L+++  V+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVI 482



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/491 (23%), Positives = 231/491 (47%), Gaps = 12/491 (2%)

Query: 76  GLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           G+  D+F ++SL+ +     + + +H   L LG     +L++  I   +  G+I  A   
Sbjct: 17  GIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE- 194
           F D        + A++ GY  N  F  +  ++  M+   +  + F+   +L A   +   
Sbjct: 76  FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135

Query: 195 --GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD--VVSWSER 250
             G  +H    ++GF + V   + N ++ LY +C +   A  +F+ +  P+  +VSW+  
Sbjct: 136 QMGRFVHAQVFRLGFDADV--FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193

Query: 251 IAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           ++A     + +EA  +F  +R  D + +   ++++L++    + L+ G+ I A   K+G 
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +  +L +MY KCGQV  A+ +FD +   + + WN+MI+GY++NG+  +A+DMF  
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M+   + P+  ++ S + A +   SL+QA  ++ ++ +S +  D  + S LI  + KC +
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  ++ V      ++ V  +A+           EA+ LYR +       N  TF  +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAG 546
           C     + +G          + +      + VID+  + G ++ A    + +  +  +  
Sbjct: 434 CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493

Query: 547 WNAMMMGYAQH 557
           W A++    +H
Sbjct: 494 WGALLSACKKH 504



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 8/371 (2%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           KQI A    +G      +   LI      G +  AR +FD L       WN++I GYS N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             F  AL M+ +M    + P+ +T   +L+A S    L+    VH+ + + GF  D  + 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 416 SCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + LI  Y KC  L  ++ V     + ++  V   A+ S         EALE++  +    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            + +      VL A   + DL+QG++IH   +K   + +  +  ++  MY KCG +  AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F K+   +L  WNAM+ GYA++G   E  ++F++M    V+PD I+  + +++C   G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 594 LVREARTYLSCM--SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            + +AR+    +  SD       +   + ++D+  + G +EGA++  D+  +  D  +W 
Sbjct: 338 SLEQARSMYEYVGRSDYRD---DVFISSALIDMFAKCGSVEGARLVFDRT-LDRDVVVWS 393

Query: 652 SLLSACTIYGN 662
           +++    ++G 
Sbjct: 394 AMIVGYGLHGR 404



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 16/197 (8%)

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           T   Q K IH   L        F+ + +I      G I  A++ F  + R  +  WNA++
Sbjct: 32  THKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAII 91

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GY+++  + +   +++ M    V PD  T+  +L +C  +GL     ++L     +H  
Sbjct: 92  RGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGL-----SHLQMGRFVHAQ 144

Query: 612 IPQLEHYACI------VDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYGNI- 663
           + +L   A +      + L  +   L  A+   + +P+P    + W +++SA    G   
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204

Query: 664 -DLGLLAGSKLLELQPD 679
             L + +  + ++++PD
Sbjct: 205 EALEIFSQMRKMDVKPD 221


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 199/660 (30%), Positives = 346/660 (52%), Gaps = 14/660 (2%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
            H   +    S+  ++ +  ++ Y+    + +A   F        +   AM+CGY+ +G 
Sbjct: 51  THAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGR 110

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
           + ++ E+F  MRS  LE++  S T  L A   S D + G +I    V+ G        + 
Sbjct: 111 YRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKN--RFVG 168

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA----AACDGVEAFGLFKDLRFNDF 272
           +++++  V+ G+  +A ++FD +   DVV W+  I     A C  V AF LF ++  +  
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDV-AFQLFFEMHGSGI 227

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + +  TM +L+ + GG   L+ GK +  +   +G    + +  + + MY K G +  AR 
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARW 287

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +F  +  ++ VSWN+MI+G   NG   ++ D+F  ++  S   +  T+ S+L+  S + S
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTAS 347

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L     +H   I+S F  +  + + ++  Y KC +L ++  V + +  +N +   A+   
Sbjct: 348 LATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVG 406

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           L       +AL L+  +       N  TF  ++ +CA +  L++G++IH    +  +  D
Sbjct: 407 LAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFD 466

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           I   +A++DMY KCG I  A+R F    I +D +  WN+M+ GY  HG  ++   +++KM
Sbjct: 467 IVNMTALVDMYAKCGKINLAERIFSHGSISKDVVL-WNSMITGYGMHGHGYQAVGIYHKM 525

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            + G+KP++ T+L++L++C H+ LV +  +  + M   H + P  +HYAC+VDLL R G 
Sbjct: 526 IEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGR 585

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
            E A+  I++MP  P   + ++LLS C  + NI+LG+    KLL L   N   Y++LSN+
Sbjct: 586 FEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNI 645

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           YA A  W+ V  +R  M+ + L K PGYS +  G + H F+AGD+SH   +EIY  L  L
Sbjct: 646 YAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESL 705



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 228/449 (50%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I S  ++ G   +  + +++IS   KF     A R      N+D++ +N++I G  +  
Sbjct: 151 EIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAG 210

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A +LF  +   G++P   T +SL++AC   G+L+  + +HG  L LG  + + +++
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLT 270

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGL 175
            F++ Y+K G+I SA   F      + V++ AM+ G V NG   +S ++F  +   S G 
Sbjct: 271 SFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF 330

Query: 176 ELNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +L    SL      +  +  G+ +HG  ++  F S +   L+ AI++LY +CG    A  
Sbjct: 331 DLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLI--LSTAIVDLYSKCGSLKQATF 387

Query: 235 MFDEITEPDVVSWSER---IAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + + +V++W+     +A      +A  LF  ++      N  T ++L+ S      
Sbjct: 388 VFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGS 447

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY-LIFKDSVSWNSMIA 350
           L+ G+ I    +++GF   +    AL+ MY KCG++N A  IF +  I KD V WNSMI 
Sbjct: 448 LKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMIT 507

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY  +G   QA+ ++  M+E  L PN  T  S+L A S+S+ ++Q + + + + +   + 
Sbjct: 508 GYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIR 567

Query: 411 D-DSMISCLITTYGKCNALNESKRVLSEI 438
             +   +CL+    +     E++ ++ ++
Sbjct: 568 PIEKHYACLVDLLSRAGRFEEAQALIEKM 596



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/550 (23%), Positives = 268/550 (48%), Gaps = 18/550 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT--QNRDIITYNALISGLARFC 60
           ++ +I N    D  ++T L+  ++       A R++FD   Q + ++  NA++ G  +  
Sbjct: 52  HAQIITNSLSTDQFVATKLVKAYSDLRSLEAA-RYVFDQFFQPKGLLC-NAMLCGYLQSG 109

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +    L+LF  +R + L  D+ + +  +KAC S  + E+   +    ++ G     ++ S
Sbjct: 110 RYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I    K G+I  A+  F    + D V + +++ GYV  G FD + ++F EM   G++ 
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++T+++   G   ++K G+ +HG+ + +G  + +   +  + +++Y + G    A  
Sbjct: 230 SPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDIL--VLTSFVDMYSKMGDIESARW 287

Query: 235 MFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++   ++VSW+  I+    +G+  E+F LF  L  +    +  T+++LL        
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTAS 347

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK +   C    F   + +  A++ +Y KCG +  A  +F+ +  ++ ++W +M+ G
Sbjct: 348 LATGKILHG-CAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVG 406

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            ++NG    AL +F  M E  +  N  T  S++ + ++  SLK+   +H H+ + GF  D
Sbjct: 407 LAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFD 466

Query: 412 DSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIW 470
              ++ L+  Y KC  +N ++R+ S     K+ V  N++ +         +A+ +Y  + 
Sbjct: 467 IVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMI 526

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA-VIDMYCKCGTI 529
               + N +TF  +L AC+    +EQG ++     +    + I    A ++D+  + G  
Sbjct: 527 EEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRF 586

Query: 530 EDAKRAFRKI 539
           E+A+    K+
Sbjct: 587 EEAQALIEKM 596



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 2/273 (0%)

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           +SK+L      H+ II +    D  + + L+  Y    +L  ++ V  +  +   +  NA
Sbjct: 41  SSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNA 100

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +    + +  + E LEL+  +     EV+  + +  LKACA+  D E G  I   A++  
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
            +++ FV S++I    K G I +A+R F  +    +  WN+++ GY Q GC+     LF 
Sbjct: 161 MEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFF 220

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M   G+KP  IT  +++ +C   G ++  +     +  L GL   +      VD+  ++
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL-GLGNDILVLTSFVDMYSKM 279

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           G +E A+    +MP   +   W +++S C   G
Sbjct: 280 GDIESARWVFYKMPT-RNLVSWNAMISGCVRNG 311


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 229/809 (28%), Positives = 390/809 (48%), Gaps = 86/809 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            T I    +      A R   +   RD++++N++I+G ++  +   A  LFD    + +R
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234

Query: 79  PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIEN---------------- 122
                 +   K  G ++E   V     +    S   ++SG+++N                
Sbjct: 235 TWTILLTGYAKE-GRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK 293

Query: 123 -----------YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
                      Y     +  A   F    + ++V++  M+ GYV   ++ ++ +VFV+M 
Sbjct: 294 NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353

Query: 172 SLGLELNEFSLTAVLGASFDVKEGEQI---HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
                 ++     VL A   + + E I       +K G+   V   + +AI+N Y R G 
Sbjct: 354 RTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVV--VGSAILNAYTRNGS 411

Query: 229 KLDAVKMFDEITEPDVVSWSERIAA--ACDGVE-AFGLFKDLRFNDFQINEYT-MINLLS 284
              A+  F+ + E +  SW+  IAA   C  ++ A  L++  R  +  +   T M+   +
Sbjct: 412 LDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYE--RVPEQTVATKTAMMTAYA 469

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIG----NALISMYGKCGQVNDARSIFDYLIFK 340
            VG  RI +A         ++ F E+++      NA+I+ Y + G + +A+ +F  +  K
Sbjct: 470 QVG--RIQKA---------RLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK 518

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           +S SW +MIAG+ +N    +AL++   +     +P+  +  S L A +N   ++    +H
Sbjct: 519 NSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIH 578

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCN-------------------------------ALN 429
           S  IK+G   +  +++ LI+ Y KC                                 L+
Sbjct: 579 SLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLD 638

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           +++ V  ++ K++ V   A+ S  V A     AL+L+  +     + N  T + +L AC 
Sbjct: 639 DARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACG 698

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  ++ G+  H L  K  +D  +FV +++I MY KCG  ED    F ++    L  WNA
Sbjct: 699 NLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNA 757

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           +++G AQ+G   E   +F +M   G+ PD++++L VL +C HAGLV E   + + M+  +
Sbjct: 758 VLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKY 817

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G++P + HY C+VDLLGR G L  A+  I+ MP+ PD+ IW++LL AC I+ N++LG   
Sbjct: 818 GIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRV 877

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
             +L ++     +TYVLLSNL+AS GMW+ V ++RK MK++ L KEPG SWI V    H 
Sbjct: 878 AERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHC 937

Query: 730 FYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           F  GD +H Q +EIY  L + Y    AT 
Sbjct: 938 FVTGDRTHDQIEEIYSALKEYYGCFRATG 966


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 197/583 (33%), Positives = 313/583 (53%), Gaps = 9/583 (1%)

Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMF 236
           S  AV  A+  V     G   H F  K+   SG  N  ++ A++N+Y + G   DA ++F
Sbjct: 122 SFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVF 181

Query: 237 DEITEPDVVSWSERIAAACDGV---EAFGLFK-DLRFNDFQINEYTMINLLSSVGGERIL 292
           D++   + VSW+  ++    G    EAF LF+  L+    + NE+    +LS+V     L
Sbjct: 182 DQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGL 241

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G Q+     K G +  VS+ N+L++MY K   ++ A ++F     ++S++W++MI GY
Sbjct: 242 LIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGY 301

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           ++NG  + A  MF  M      P  +T   IL A S+  +L    Q H  ++K GF    
Sbjct: 302 AQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQV 361

Query: 413 SMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            + S L+  Y KC    ++K    ++ D  + V   A+ +  V    H EAL LY  +  
Sbjct: 362 YVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDK 421

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                +  T + VL+ACA +  LE GK +H   LK  +     V +A+  MY KCG +ED
Sbjct: 422 EGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLED 481

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           +   FR++    +  WN+++ G++QHG   +  +LF +M   G+ PD IT++ VL +C H
Sbjct: 482 SMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSH 541

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV     Y   MS  +GLIP+L+HYACIVD+L R G L+ AK  I+ + I     +W+
Sbjct: 542 MGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWR 601

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +L AC    + D+G  AG +L+EL  ++ S Y+LLSN+YA+   WNDV ++R  M+ + 
Sbjct: 602 IVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRG 661

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + K+PG SW+ +    + F  G+  H ++++I  ELI+L +HM
Sbjct: 662 VSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHM 704



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 258/572 (45%), Gaps = 48/572 (8%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKACG---SLQENE 98
           RD+ ++N+L++ L+R  Q   AL  F  +      + P   +F+++  A     S     
Sbjct: 82  RDVASWNSLLNPLSRH-QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGA 140

Query: 99  IVHGVCLKLGFSS---RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV 155
           + H    KL  SS    V++ +  +  Y K G I  A   F      + V++ AMV GY 
Sbjct: 141 VAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYA 200

Query: 156 WNGEFDKSKEVF-VEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVK---VGFL 208
                +++ E+F + ++   LE NEF  TAVL A      +  G Q+HG  +K   VGF+
Sbjct: 201 TGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFV 260

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFK 265
           S     + N+++ +Y +      A+ +F    E + ++WS  I       E   A  +F 
Sbjct: 261 S-----VENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFL 315

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +    F   E+T + +L++      L  GKQ      K+GF   V + +AL+ MY KCG
Sbjct: 316 QMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCG 375

Query: 326 QVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
              DA+  F  L    D V W +MI G+ +NG   +AL ++  M +  ++P+  T+ S+L
Sbjct: 376 CTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVL 435

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A +   +L+   Q+H+ I+K GF L  S+ + L T Y KC  L +S  V   +  ++ +
Sbjct: 436 RACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDII 495

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG------- 497
             N++ S         +AL+L+  +       +  TF  VL AC+ M  +++G       
Sbjct: 496 SWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAM 555

Query: 498 --------KAIH--CLA-LKARYDQ----DIFVESAVIDM-YCKCGTIEDAKRAFRKICR 541
                   K  H  C+  + +R  Q      F+ES  ID   C    +  A R+ R    
Sbjct: 556 SKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDV 615

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            + AG   M +G      Y  +SN++    K+
Sbjct: 616 GAYAGEQLMELGTEDSSAYILLSNIYAAQRKW 647



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 226/474 (47%), Gaps = 35/474 (7%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ- 75
           +ST L++ + K      A R      +R+ +++ A++SG A    S  A +LF RL  Q 
Sbjct: 160 VSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELF-RLMLQE 218

Query: 76  -GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
             L  + F  ++++ A      L     +HG+ LK G    V + +  +  YAK+  + +
Sbjct: 219 CPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F    + +++ ++AM+ GY  NGE D +  +F++M S G    EF+   +L AS D
Sbjct: 279 AMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSD 338

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSW 247
           +     G+Q HG  VK+GF   V  ++ +A++++Y +CG   DA   F ++ +  DVV W
Sbjct: 339 MGALVVGKQAHGLMVKLGFERQV--YVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIW 396

Query: 248 SERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I       +  EA  L+  +       +  T+ ++L +      L  GKQ+ A   K
Sbjct: 397 TAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILK 456

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            GF    S+G AL +MY KCG + D+  +F  +  +D +SWNS+I+G+S++G    ALD+
Sbjct: 457 CGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDL 516

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYG 423
           F  M    + P+  T  ++L A S+   + +       + K  G +      +C++    
Sbjct: 517 FEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILS 576

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           +   L E+K  +  I              + + +C      L+R + G+CR + 
Sbjct: 577 RAGQLKEAKDFIESI-------------TIDHGTC------LWRIVLGACRSLR 611



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 174/394 (44%), Gaps = 12/394 (3%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ--VNDARSIFDYLI--FKDSVSW 345
           R  RAG  +  +  K G      + N+LI+ Y    +  +  A ++F  +    +D  SW
Sbjct: 28  RTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASW 87

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           NS++   S +     AL  F  M+  +  ++P  ++ A++  A +   S       H+  
Sbjct: 88  NSLLNPLSRHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFA 146

Query: 404 IK--SGFLLDDSMIS-CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            K  S    ++  +S  L+  Y K  A+++++RV  ++  +NAV   A+ S      C  
Sbjct: 147 CKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSE 206

Query: 461 EALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           EA EL+R +   C  E N    + VL A +    L  G  +H L LK      + VE+++
Sbjct: 207 EAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSL 266

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           + MY K   ++ A   F      +   W+AM+ GYAQ+G     + +F +M   G  P E
Sbjct: 267 VTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTE 326

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T++ +L +    G +   +     M  L G   Q+   + +VD+  + G    AK    
Sbjct: 327 FTFVGILNASSDMGALVVGKQAHGLMVKL-GFERQVYVKSALVDMYAKCGCTGDAKDGFH 385

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           Q+    D  IW ++++     G  +  L+  S++
Sbjct: 386 QLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRM 419



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 54/94 (57%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K G  L   + T L + ++K  +   +        +RDII++N++ISG ++  
Sbjct: 449 QLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHG 508

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           +   AL LF+ ++ +G+ PD  TF +++ AC  +
Sbjct: 509 RGRDALDLFEEMKLEGIAPDHITFINVLCACSHM 542


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 165/461 (35%), Positives = 268/461 (58%), Gaps = 2/461 (0%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +R G+++ A   K  +   V +   LI +Y KC  + DAR + D +  ++ VSW +MI+G
Sbjct: 493 IREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISG 552

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS+ G+ ++AL +F  ML     PN +T A++L + ++S   +   Q+HS +IK+ F   
Sbjct: 553 YSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH 612

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y K   + E++RV   + +++ V   A+ S         EAL+L+R +  
Sbjct: 613 IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQR 672

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                N  T++ VL A + +  L+ G+ +H   L+A+    + +++++IDMY KCG++  
Sbjct: 673 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 732

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCC 590
           ++R F  +   ++  WNAM++GY++HG   E   LF  M +   VKPD +T+LAVL+ C 
Sbjct: 733 SRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 792

Query: 591 HAGLV-REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           H G+  R    +   ++   G  P++EHY C+VDL GR G +E A   I +MP  P A I
Sbjct: 793 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 852

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W SLL AC ++ N+ +G     +LLE++ +N   YV+LSNLYASAG W+DV  +R+ MKE
Sbjct: 853 WGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKE 912

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           K + KEPG SWI +    H F+A D SH + +E++ ++ +L
Sbjct: 913 KAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVREL 953



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 206/411 (50%), Gaps = 18/411 (4%)

Query: 164 KEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           KE  +EM   GLE+      +VL    +   ++EG+++H   +K  +   V  +L   ++
Sbjct: 462 KEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPV--YLRTRLI 519

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEY 277
            LY +C    DA ++ DE+ E +VVSW+  I+         EA  LF ++  +    NE+
Sbjct: 520 VLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEF 579

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T   +L+S       + G+QI +   K  F   + +G++L+ MY K G++ +AR +FD L
Sbjct: 580 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 639

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D VS  ++I+GY++ G   +ALD+F  +    +  N  T AS+L A+S   +L    
Sbjct: 640 PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 699

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           QVHSH++++       + + LI  Y KC +L  S+R+   + ++  +  NA+   LV  S
Sbjct: 700 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAM---LVGYS 756

Query: 458 CHA---EALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQ 511
            H    EA+EL++ +    + + +  TF  VL  C+     ++G  I    +  K  ++ 
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYH 561
           +I     V+D++ + G +E+A    +K+  +  A  W +++     H   H
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH 867



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 210/435 (48%), Gaps = 16/435 (3%)

Query: 39  FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQ 95
           F  Q   + T+ A    L   C +    +    +  QGL  +   + S++  C S   ++
Sbjct: 435 FSRQRILLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIR 494

Query: 96  ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV 155
           E + VH   +K  +   VYL +  I  Y K   +  A     +  + + V++TAM+ GY 
Sbjct: 495 EGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYS 554

Query: 156 WNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVC 212
             G   ++  +FVEM   G   NEF+   VL    +S   + G QIH   +K  F S + 
Sbjct: 555 QRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI- 613

Query: 213 NHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRF 269
             + ++++++Y + G+  +A ++FD + E DVVS +  I+         EA  LF+ L+ 
Sbjct: 614 -FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQR 672

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              + N  T  ++L+++ G   L  G+Q+ +   +      V + N+LI MY KCG +  
Sbjct: 673 EGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 732

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVS 388
           +R IFD +  +  +SWN+M+ GYS++G   +A+++F  M E + + P+  T  ++L   S
Sbjct: 733 SRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 792

Query: 389 NSKSLKQAMQVHSHII--KSGFLLDDSMISCLITTYGKCNALNESKRVLSEI--DKKNAV 444
           +     + +++   ++  K GF  +     C++  +G+   + E+   + ++  +   A+
Sbjct: 793 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 852

Query: 445 HINALASVLVYASCH 459
             + L +  V+ + H
Sbjct: 853 WGSLLGACRVHQNVH 867



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 177/363 (48%), Gaps = 15/363 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ +IK  +     L T LI  + K      A R L +   R+++++ A+ISG ++  
Sbjct: 498 RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 557

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            +  AL LF  +   G  P+ FTF++++ +C S    Q    +H + +K  F S +++ S
Sbjct: 558 YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGS 617

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK+G+I  A   F    + D V+ TA++ GY   G  +++ ++F  ++  G+  
Sbjct: 618 SLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRS 677

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +  +VL A      +  G Q+H   ++      V   L N+++++Y +CG    + +
Sbjct: 678 NYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVV--LQNSLIDMYSKCGSLTYSRR 735

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR-FNDFQINEYTMINLLSSVGGER 290
           +FD + E  V+SW+  +        G EA  LFK ++  N  + +  T + +LS      
Sbjct: 736 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 795

Query: 291 ILRAGKQI--QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNS 347
           +   G +I  +    K GF   +     ++ ++G+ G+V +A      + F+ + + W S
Sbjct: 796 MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGS 855

Query: 348 MIA 350
           ++ 
Sbjct: 856 LLG 858



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 13/174 (7%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           EV    +  VL  C + T + +G+ +H   +K  Y+  +++ + +I +Y KC  + DA+R
Sbjct: 474 EVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARR 533

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
              ++   ++  W AM+ GY+Q G   E  +LF +M   G  P+E T+  VLTSC  +  
Sbjct: 534 VLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSG 593

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACI------VDLLGRVGLLEGAKMTIDQMP 642
            +  R        +H L+ +    + I      +D+  + G +  A+   D +P
Sbjct: 594 FQLGR-------QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 8/261 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+SL+IK        + ++L+  + K      A R       RD+++  A+ISG A+  
Sbjct: 599 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLG 658

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF RL+ +G+R +  T++S++ A     +L     VH   L+      V L +
Sbjct: 659 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 718

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LE 176
             I+ Y+K G +  +   F    +   +++ AM+ GY  +G   ++ E+F  M+    ++
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 778

Query: 177 LNEFSLTAVL-GASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAV 233
            +  +  AVL G S    E   +  F   V    G    + +   +++L+ R G+  +A 
Sbjct: 779 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 838

Query: 234 KMFDEIT-EPDVVSWSERIAA 253
           +   ++  EP    W   + A
Sbjct: 839 EFIKKMPFEPTAAIWGSLLGA 859


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 221/736 (30%), Positives = 361/736 (49%), Gaps = 74/736 (10%)

Query: 60  CQSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
           C++   LK+F   L  QGL  D    + LV     L   E        L F+  V+    
Sbjct: 41  CKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRE-------SLSFAKEVF---- 89

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
                 ++GE  S   CF          Y +++ GY  +G   ++  +F+ M + G+  +
Sbjct: 90  ------ENGE--SYGTCF---------MYNSLIRGYASSGLCKEAILLFIRMMNSGISPD 132

Query: 179 EFSLT---AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +++     +V   S D   G QIHG  +K+ +   +   + N++++ Y  CG+   A K+
Sbjct: 133 KYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDL--FVQNSLVHFYAECGELDCARKV 190

Query: 236 FDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           FDE++E +VVSW+  I        A D V+ F  F+ +R  D   N  TM+ ++S+    
Sbjct: 191 FDEMSERNVVSWTSMICGYARREFAKDAVDLF--FRMVRDEDVIPNSVTMVCVISACAKL 248

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+++  F    G      + +AL+ MY KC  ++ A+ +FD     +    N+M 
Sbjct: 249 EDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMA 308

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y   G   +AL +   M++  + P+  +M S + + S  +++      H +++++GF 
Sbjct: 309 SNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 368

Query: 410 LDDSMISCLITTYGKCNALNESKRVLS---------------------EID--------- 439
             D++ + LI  Y KC+  + + R+                       E+D         
Sbjct: 369 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTM 428

Query: 440 -KKNAVHINALASVLVYASCHAEALELYRTIWGS-CREVNGSTFSIVLKACAAMTDLEQG 497
            +KN V  N + S LV  + + EA+E++  +    C  V+G T   +  AC  +  L+  
Sbjct: 429 PEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLA 488

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K I+    K R   D+ + + ++DM+ +CG  E A   F  +    ++ W A +   A  
Sbjct: 489 KWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 548

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G       LFN+M + G+KPD + ++  LT+CCH GLV++ +   + M  LHG+ P+  H
Sbjct: 549 GNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVH 608

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDLLGR GLLE A   I  MP  P+  IW SLL+AC + GN+++   A  K+  L 
Sbjct: 609 YGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLA 668

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P+   +YVLLSN+YASAG WND+ K+R  MKEK L K PG S I + G TH F +GD SH
Sbjct: 669 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESH 728

Query: 738 SQSKEIYKELIKLYEH 753
            + ++I   L +L + 
Sbjct: 729 PEMRKIEAMLDELSQR 744



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 134/559 (23%), Positives = 254/559 (45%), Gaps = 56/559 (10%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--NEI-VHGVCL 105
           YN+LI G A       A+ LF R+   G+ PD +TF   +  C   ++  N I +HG+ +
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK- 164
           K+ ++  +++ +  +  YA+ GE+  A   F +  + + V++T+M+CGY    EF K   
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYA-RREFAKDAV 219

Query: 165 EVFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           ++F  M R   +  N  ++  V+ A     D++ GE+++ F    G    V + + +A++
Sbjct: 220 DLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGI--EVNDLMISALV 277

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV------EAFGLFKDLRFNDFQI 274
           ++Y++C     A ++FDE    ++   +   A A + V      EA G+   +  +  + 
Sbjct: 278 DMYMKCNAIDIAKRLFDEYGASNLDLCN---AMASNYVRQGLTKEALGVLNLMMDSGIRP 334

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  +M++ +SS    R +  GK    +  + GF    +I NALI MY KC + + A  IF
Sbjct: 335 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 394

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP------------------- 375
           D +  K  V+WNS++AGY ENG  + A + F  M E +++                    
Sbjct: 395 DRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIE 454

Query: 376 -------------NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
                        +G TM SI  A  +  +L  A  ++ +I K+   LD  + + L+  +
Sbjct: 455 VFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMF 514

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            +C     +  + + +  ++     A    +  A     A+EL+  +     + +G  F 
Sbjct: 515 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFI 574

Query: 483 IVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
             L AC     ++QGK I      L     +D+     ++D+  + G +E+A +  + + 
Sbjct: 575 GALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHY-GCMVDLLGRAGLLEEALQLIKDMP 633

Query: 541 RD-SLAGWNAMMMGYAQHG 558
            + +   WN+++      G
Sbjct: 634 TEPNDVIWNSLLAACRVQG 652



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 112/497 (22%), Positives = 223/497 (44%), Gaps = 54/497 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L+IK  +  D  +  +L+  + +  +   A +   +   R+++++ ++I G AR  
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARRE 213

Query: 61  QSGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            +  A+ LF R+ R + + P++ T   ++ AC  L++    E V+      G      ++
Sbjct: 214 FAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMI 273

Query: 117 SGFIENYAKSGEIVSAEMCFRD----CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           S  ++ Y K   I  A+  F +     LDL N    AM   YV  G   ++  V   M  
Sbjct: 274 SALVDMYMKCNAIDIAKRLFDEYGASNLDLCN----AMASNYVRQGLTKEALGVLNLMMD 329

Query: 173 LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  +  S+ + + +   ++    G+  HG+ ++ GF S   +++ NA++++Y++C ++
Sbjct: 330 SGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW--DNICNALIDMYMKCHRQ 387

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDF-----------QIN 275
             A ++FD ++   VV+W+  +A   +  E   A+  F  +   +            Q N
Sbjct: 388 DTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQEN 447

Query: 276 EY---------------------TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            Y                     TM+++ S+ G    L   K I  +  K      V +G
Sbjct: 448 MYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLG 507

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             L+ M+ +CG    A SIF+ L  +D  +W + I   +  G   +A+++F  M+E  L 
Sbjct: 508 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLK 567

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKR 433
           P+G      L A  +   ++Q  ++ + + K  G   +D    C++   G+   L E+ +
Sbjct: 568 PDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQ 627

Query: 434 VLSEID-KKNAVHINAL 449
           ++ ++  + N V  N+L
Sbjct: 628 LIKDMPTEPNDVIWNSL 644


>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 167/543 (30%), Positives = 305/543 (56%), Gaps = 4/543 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND-F 272
           N+++++Y RCG+  DA K+FD +   D +SW+ RI+      D    F +FK L  +  +
Sbjct: 93  NSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIY 152

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           Q ++ T+  +L++          K I +  +  G+   +++GNALI+ Y +CG  +  R 
Sbjct: 153 QFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRR 212

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +FD +  K+ V+W ++I+G S+  F+ ++L +F  M +  + PN  T  S L A S  ++
Sbjct: 213 VFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQA 272

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           +++  Q+H  + K G   D  + S L+  Y KC +L ++ ++    ++ + V +  +   
Sbjct: 273 IREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVG 332

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           L       E+++++  +  +   ++ +  S +L      T L  GK IH L +K  +  +
Sbjct: 333 LAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSN 392

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            FV + +I+MY KCG ++D+ + F  + + +   WN+M+  +A+HG       L+ +M  
Sbjct: 393 YFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRL 452

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            GV P ++T+L++L +C H GLV +   +L  M+  +G+ P++EHYAC+VD++GR GLL 
Sbjct: 453 EGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLN 512

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            AK  I+++P  P   +WQ+LL AC+I+GN ++G  A ++L    P++ + Y+LL+N+Y+
Sbjct: 513 EAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYS 572

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           S G W +  +  K+MK+  + KE G SWI +    H F   D  H  ++ IY  L +L++
Sbjct: 573 SEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFK 632

Query: 753 HMV 755
            M+
Sbjct: 633 LMM 635



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 204/424 (48%), Gaps = 32/424 (7%)

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFME---------VVSIGNALIS 319
           + F IN+  +  LLS  G E  L  G  + A   K  GF++         V+ + N+L+S
Sbjct: 38  SKFAINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLS 97

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP-NGY 378
           MY +CG++ DA  +FD++  KD++SWNS I+G   NG       +F  + E  +   +  
Sbjct: 98  MYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQA 157

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+ ++L A    +    +  +HS +   G+  + ++ + LIT+Y +C   +  +RV  E+
Sbjct: 158 TLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEM 217

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            +KN V   A+ S L     + E+L+L+  +     + N  T+   L AC+ +  + +G+
Sbjct: 218 SEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGR 277

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH L  K     D+ +ESA++DMY KCG++EDA + F             +++G AQ+G
Sbjct: 278 QIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNG 337

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              E   +F KM K GV  D     A+L        V    T L+    +H LI +    
Sbjct: 338 FEEESIQVFVKMVKNGVVIDPNMISAILG-------VFGIDTSLALGKQIHSLIIKKSFG 390

Query: 619 A------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           +       ++++  + G L+ +      MP   ++  W S+++A   +GN       GS+
Sbjct: 391 SNYFVNNGLINMYSKCGDLDDSIKIFCWMP-QRNSVSWNSMIAAFARHGN-------GSR 442

Query: 673 LLEL 676
            L+L
Sbjct: 443 ALQL 446



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 219/440 (49%), Gaps = 13/440 (2%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  +L+S +++  + R A +       +D I++N+ ISGL          ++F +L   
Sbjct: 90  VVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYES 149

Query: 76  GL-RPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           G+ + D  T ++++ AC   +    ++++H +    G+   + + +  I +Y + G   S
Sbjct: 150 GIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSS 209

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
               F +  + + V +TA++ G      +++S ++F +MR   ++ N  +  + L A   
Sbjct: 210 GRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSG 269

Query: 192 ---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
              ++EG QIHG   K+G    +C  + +A+M++Y +CG   DA K+F+   E D VS +
Sbjct: 270 LQAIREGRQIHGLVWKLGVHFDLC--IESALMDMYSKCGSLEDAWKIFESAEEVDEVSMT 327

Query: 249 E-RIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
              +  A +G   E+  +F  +  N   I+   +  +L   G +  L  GKQI +   K 
Sbjct: 328 VILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKK 387

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
            F     + N LI+MY KCG ++D+  IF ++  ++SVSWNSMIA ++ +G  ++AL ++
Sbjct: 388 SFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLY 447

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGK 424
             M    + P   T  S+L A ++   +++ M     + K  G        +C++   G+
Sbjct: 448 EEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGR 507

Query: 425 CNALNESKRVLSEIDKKNAV 444
              LNE+K+ +  + +K  +
Sbjct: 508 AGLLNEAKKFIERLPEKPGI 527



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 42/391 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+SL+   G+  +  +   LI+ + +        R   +   ++++T+ A+ISGL++   
Sbjct: 178 IHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQF 237

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              +LKLF ++R   + P++ T+ S + AC  LQ   E   +HG+  KLG    + + S 
Sbjct: 238 YEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESA 297

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+K G +  A   F    ++D V+ T ++ G   NG  ++S +VFV+M   G+ ++
Sbjct: 298 LMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVID 357

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
              ++A+LG       +  G+QIH   +K  F  G    +NN ++N+Y +CG   D++K+
Sbjct: 358 PNMISAILGVFGIDTSLALGKQIHSLIIKKSF--GSNYFVNNGLINMYSKCGDLDDSIKI 415

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  + + + VSW+  IAA     +G  A  L++++R       + T ++LL +     ++
Sbjct: 416 FCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLV 475

Query: 293 RAGKQIQAFCYKVGFMEVVS----IGNAL------ISMYGKCGQVNDARSIFDYLIFKD- 341
             G         +GF+E ++    IG  +      + M G+ G +N+A+   + L  K  
Sbjct: 476 EKG---------MGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPG 526

Query: 342 -----------SVSWNSMIAGYSENGFFNQA 361
                      S+  NS +  Y+ N  F QA
Sbjct: 527 ILVWQALLGACSIHGNSEMGKYAANQLFLQA 557



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 122/259 (47%), Gaps = 6/259 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L+ K G H D  + + L+  ++K      A++     +  D ++   ++ GLA+  
Sbjct: 278 QIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNG 337

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               ++++F ++   G+  D    S+++   G   SL   + +H + +K  F S  ++ +
Sbjct: 338 FEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNN 397

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I  Y+K G++  +   F      ++V++ +M+  +  +G   ++ +++ EMR  G+  
Sbjct: 398 GLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWP 457

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKM 235
            + +  ++L A   V   E+  GF   +    G+   + +   ++++  R G   +A K 
Sbjct: 458 TDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKF 517

Query: 236 FDEITE-PDVVSWSERIAA 253
            + + E P ++ W   + A
Sbjct: 518 IERLPEKPGILVWQALLGA 536


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 194/553 (35%), Positives = 280/553 (50%), Gaps = 37/553 (6%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAF---GLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F  I  P+ V W+  I         F     +  +  +  + NEYT  ++  S   
Sbjct: 81  ALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTK 140

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV--------------------- 327
            R    GKQ+ A   K+G      +  +LI+MY + G++                     
Sbjct: 141 IRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTAL 200

Query: 328 ----------NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                     ++AR +FD +  +D VSWN+MI+GY+++G   +A+  F  M    + PN 
Sbjct: 201 ITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV 260

Query: 378 YTMASILEAVSNS-KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            TM S+L A + S  SL+    V S I   G   +  +++ LI  Y KC  L E+  +  
Sbjct: 261 STMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE 320

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           +I  KN V  N +     + SC+ EAL L+R +  S  + N  TF  +L ACA +  L+ 
Sbjct: 321 KIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDL 380

Query: 497 GKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           GK +H    K        + + +++IDMY KCG +  AKR F  +   SLA WNAM+ G+
Sbjct: 381 GKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGF 440

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG       LF++M+  G  PD+IT++ VLT+C HAGL+   R Y S M   + + P+
Sbjct: 441 AMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPK 500

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           L HY C++DL GR GL + A+  +  M + PD  IW SLL AC I+  I+L       L 
Sbjct: 501 LPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLF 560

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           EL+P+N S YVLLSN+YA AG W DV K+R  + +  + K PG S I V    H F  GD
Sbjct: 561 ELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGD 620

Query: 735 SSHSQSKEIYKEL 747
             H QS EIYK L
Sbjct: 621 KVHPQSNEIYKML 633



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 227/489 (46%), Gaps = 52/489 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI+S +IK G H      + LI     +   D   A       +N + + +N +I GL+ 
Sbjct: 46  QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
                 AL+ +  +   G  P+ +TF S+ K+C  ++   E + VH   LKLG     ++
Sbjct: 106 SESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFV 165

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV--------- 166
            +  I  YA++GE+V+A + F      D V++TA++ GY   G  D+++E+         
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV 225

Query: 167 ----------------------FVEMRSLGLELNEFSLTAVLGA----SFDVKEGEQIHG 200
                                 F EMR   +  N  ++ +VL A       ++ G  +  
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACD 256
           +    G  S +   L N ++++YV+CG   +A  +F++I + +VVSW+  I      +C 
Sbjct: 286 WIEDRGLGSNI--RLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCY 343

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA GLF+ +  ++   N+ T +++L +      L  GK + A+  K        V++ 
Sbjct: 344 K-EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALW 402

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A+ IFD +  K   +WN+MI+G++ +G  + AL +F  M     +
Sbjct: 403 TSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFV 462

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESK 432
           P+  T   +L A  ++  L    +  S +I+  + +   +    C+I  +G+    +E++
Sbjct: 463 PDDITFVGVLTACKHAGLLSLGRRYFSSMIQD-YKVSPKLPHYGCMIDLFGRAGLFDEAE 521

Query: 433 RVLSEIDKK 441
            ++  ++ K
Sbjct: 522 TLVKNMEMK 530



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 234/549 (42%), Gaps = 83/549 (15%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS--GEIVSAEMCFRDCLDLD 143
           +L+  C +LQ  + +H   +K G  +  + +S  IE  A S  G++  A   F+   + +
Sbjct: 33  TLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPN 92

Query: 144 NVAYTAMVCG--------------------------YVWNGEFD---------KSKEVFV 168
           +V +  M+ G                          Y +   F          + K+V  
Sbjct: 93  HVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHA 152

Query: 169 EMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGV--KVGFLSGVCNHLNNAIMNLYVRC 226
            +  LGLE N F  T+++  +   + GE ++   V  K      V      A++  Y   
Sbjct: 153 HVLKLGLEHNAFVHTSLI--NMYAQNGELVNARLVFDKSSMRDAVS---FTALITGYASK 207

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL 283
           G   +A ++FDEI   DVVSW+  I+         EA   F+++R      N  TM+++L
Sbjct: 208 GFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVL 267

Query: 284 SSVGGE-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           S+       L+ G  ++++    G    + + N LI MY KCG + +A ++F+ +  K+ 
Sbjct: 268 SACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNV 327

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN MI GY+    + +AL +F  M++ ++ PN  T  SIL A +N  +L     VH++
Sbjct: 328 VSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387

Query: 403 IIKSGFLLDDS--MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           + K+   + ++  + + LI  Y KC  L  +KR+   ++ K+    NA+ S         
Sbjct: 388 VDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTD 447

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            AL L+  +       +  TF  VL AC         K    L+L  RY   +       
Sbjct: 448 TALGLFSRMTSEGFVPDDITFVGVLTAC---------KHAGLLSLGRRYFSSM------- 491

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
                   I+D K + +      L  +  M+  + + G + E   L   M    +KPD  
Sbjct: 492 --------IQDYKVSPK------LPHYGCMIDLFGRAGLFDEAETLVKNME---MKPDGA 534

Query: 581 TYLAVLTSC 589
            + ++L +C
Sbjct: 535 IWCSLLGAC 543



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 39/287 (13%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSG-----FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           L  +SN K+L+   Q+HS IIK+G     F L   +  C ++ +G    L+ +  +   I
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGD---LSYALSLFKTI 88

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
              N V  N +   L  +     ALE Y  +  S  E N  TF  + K+C  +    +GK
Sbjct: 89  RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLA------------ 545
            +H   LK   + + FV +++I+MY + G + +A+  F K   RD+++            
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208

Query: 546 ------------------GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
                              WNAM+ GYAQ G   E    F +M +  V P+  T L+VL+
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           +C  +G   +   ++    +  GL   +     ++D+  + G LE A
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 175/391 (44%), Gaps = 23/391 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D +  T LI+ +     F    R LFD    RD++++NA+ISG A+  +   A+  F+ +
Sbjct: 193 DAVSFTALITGYAS-KGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM 251

Query: 73  RYQGLRPDAFTFSSLVKACG----SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           R   + P+  T  S++ AC     SLQ    V       G  S + LV+G I+ Y K G+
Sbjct: 252 RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGD 311

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           +  A   F    D + V++  M+ GY     + ++  +F  M    ++ N+ +  ++L A
Sbjct: 312 LEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPA 371

Query: 189 SFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
             ++     G+ +H +  K          L  +++++Y +CG    A ++FD +    + 
Sbjct: 372 CANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA 431

Query: 246 SWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ----- 297
           +W+  I+  A  G    A GLF  +    F  ++ T + +L++     +L  G++     
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
           IQ   YKV     +     +I ++G+ G  ++A ++   +  K D   W S++     + 
Sbjct: 492 IQD--YKVS--PKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHR 547

Query: 357 FFNQALDMFCHMLEFSL-IPNGYTMASILEA 386
               A  +  H+ E     P+ Y + S + A
Sbjct: 548 RIELAESVAKHLFELEPENPSAYVLLSNIYA 578


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 190/550 (34%), Positives = 297/550 (54%), Gaps = 4/550 (0%)

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG--VEA-FGLFKDLR 268
           C  L    +N  +  G    A K F E++EPD++ W+  I        V+A   ++ D++
Sbjct: 18  CRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQ 77

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            +    N +T + +L + GG  +   GKQI    +K GF   V + N+L+SMY K GQ++
Sbjct: 78  ISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQIS 137

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            AR +FD L  +  VSW S+I+GY +NG   +AL++F  M + ++ P+   + S++ A +
Sbjct: 138 YARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYT 197

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           N + L Q   +H  + K G   +  ++  L T Y K   +  ++   + ++K N +  NA
Sbjct: 198 NVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 257

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           + S         EA++L+R +      V+  T    + A A +  LE  + +     K+ 
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 317

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           Y  D FV + +IDMY KCG+I  A+  F ++    +  W+ M+MGY  HG   E   L+N
Sbjct: 318 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 377

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M + GV P++ T++ +LT+C ++GLV+E       M D HG+ P  +HY+C+VDLLGR 
Sbjct: 378 EMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRA 436

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  A   I  MPI P   +W +LLSAC I+  + LG +A  +L  L P N   YV LS
Sbjct: 437 GYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLS 496

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           NLYASA +W  V  +R  M +K L K+ G+S I + G    F  GD SH +SKEI++EL 
Sbjct: 497 NLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 556

Query: 749 KLYEHMVATA 758
           +L + + A  
Sbjct: 557 RLEKRLKAAG 566



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 217/457 (47%), Gaps = 15/457 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+Y  LI +G H    L    I+    F D   A +   +    DI+ +NA+I G  +  
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                ++++  ++   + P+ FTF  ++KACG      I   +HG   K GF S V++ +
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G+I  A + F    D   V++T+++ GYV NG+  ++  VF EMR   ++ 
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +  +L +V+ A  +V+   +G+ IHG   K+G  F   +   L      +Y + G    A
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT----TMYAKRGLVEVA 240

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F+ + +P+++ W+  I+   +   G EA  LF+++   + +++  TM + + +    
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   + +  +  K  + +   +   LI MY KCG +  AR +FD +  KD V W+ MI
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY  +G   +A+ ++  M +  + PN  T   +L A  NS  +K+  ++   +   G  
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 420

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                 SC++   G+   LN++   +  +  K  V +
Sbjct: 421 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSV 457


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 190/550 (34%), Positives = 297/550 (54%), Gaps = 4/550 (0%)

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG--VEA-FGLFKDLR 268
           C  L    +N  +  G    A K F E++EPD++ W+  I        V+A   ++ D++
Sbjct: 33  CRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQ 92

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            +    N +T + +L + GG  +   GKQI    +K GF   V + N+L+SMY K GQ++
Sbjct: 93  ISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQIS 152

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            AR +FD L  +  VSW S+I+GY +NG   +AL++F  M + ++ P+   + S++ A +
Sbjct: 153 YARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYT 212

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           N + L Q   +H  + K G   +  ++  L T Y K   +  ++   + ++K N +  NA
Sbjct: 213 NVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 272

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           + S         EA++L+R +      V+  T    + A A +  LE  + +     K+ 
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 332

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           Y  D FV + +IDMY KCG+I  A+  F ++    +  W+ M+MGY  HG   E   L+N
Sbjct: 333 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 392

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M + GV P++ T++ +LT+C ++GLV+E       M D HG+ P  +HY+C+VDLLGR 
Sbjct: 393 EMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRA 451

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  A   I  MPI P   +W +LLSAC I+  + LG +A  +L  L P N   YV LS
Sbjct: 452 GYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLS 511

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           NLYASA +W  V  +R  M +K L K+ G+S I + G    F  GD SH +SKEI++EL 
Sbjct: 512 NLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 571

Query: 749 KLYEHMVATA 758
           +L + + A  
Sbjct: 572 RLEKRLKAAG 581



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 217/457 (47%), Gaps = 15/457 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+Y  LI +G H    L    I+    F D   A +   +    DI+ +NA+I G  +  
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                ++++  ++   + P+ FTF  ++KACG      I   +HG   K GF S V++ +
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G+I  A + F    D   V++T+++ GYV NG+  ++  VF EMR   ++ 
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +  +L +V+ A  +V+   +G+ IHG   K+G  F   +   L      +Y + G    A
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT----TMYAKRGLVEVA 255

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F+ + +P+++ W+  I+   +   G EA  LF+++   + +++  TM + + +    
Sbjct: 256 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 315

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   + +  +  K  + +   +   LI MY KCG +  AR +FD +  KD V W+ MI
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY  +G   +A+ ++  M +  + PN  T   +L A  NS  +K+  ++   +   G  
Sbjct: 376 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 435

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                 SC++   G+   LN++   +  +  K  V +
Sbjct: 436 PHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSV 472


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 215/749 (28%), Positives = 363/749 (48%), Gaps = 55/749 (7%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKL 68
           H D +   T+++ +    D   A   L    + D++++NAL+SG   +CQ G     + L
Sbjct: 94  HRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSG---YCQRGMFRDLVGL 150

Query: 69  FDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAK 125
              +   G+ PD  T + L+KACG L +  +   +H + +K G    V   S  ++ Y K
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
              +  A   F    + ++V++ A++ G V N ++ +  E+    +++            
Sbjct: 211 CRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKAITC---------- 260

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
                 +    Q+H   +K  F S     +  AI+++Y +    +DA + F  +    V 
Sbjct: 261 ------LSTARQLHAHAIKNKFSSD--RVVGTAIVDVYAKADSLVDARRAFFGLPNHTVE 312

Query: 246 SWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           + +  +        G EA  LF+ +  +       ++  + S+                C
Sbjct: 313 TCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSA----------------C 356

Query: 303 YKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
            +V GF   V + NA++ +YGKC  + +A  +F  +  +DSVSWN++IA   +N  +   
Sbjct: 357 AEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDT 416

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +     ML   +  + +T  S+L+A +  +SL+  + VH   IKSG  LD  + S ++  
Sbjct: 417 IVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDM 476

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC  + E+ ++   I  +  V  N++ +         EA + +  +     + +  T+
Sbjct: 477 YCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTY 536

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + VL +CA +  +E GK IH   +K     D F+ S ++DMY KCG + D++  F K+ +
Sbjct: 537 ATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQK 596

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
                WNAM+ GYA HG   E   +F +  K  V P+  T++AVL +C H GL+ +   Y
Sbjct: 597 LDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRY 656

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M+  + L PQLEH+AC+       G  E  K  I  MP+  DA IW++LLS C I  
Sbjct: 657 FHLMTSRYKLEPQLEHFACM-------GPQEALKF-IRSMPLEADAVIWKTLLSICKIRQ 708

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           ++++   A S +L L PD+ S Y+LLSN+YA +G W DV + R+ M++  L KEPG SWI
Sbjct: 709 DVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWI 768

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            V    H F  G+  H +S+E+Y+ L  L
Sbjct: 769 EVQSEMHGFLVGEKVHPRSREVYEMLNNL 797



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 163/666 (24%), Positives = 280/666 (42%), Gaps = 93/666 (13%)

Query: 83  TFSSLVKACGS-----LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF- 136
           TFS + + C S     L   +  H   L  GF   +++ +  ++ YA+ G    A   F 
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 137 ----RDCL--------------------------DLDNVAYTAMVCGYVWNGEFDKSKEV 166
               RD +                          D D V++ A++ GY   G F     +
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 167 FVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
            +EM   G+  +  +L  +L   G   D+  G QIH   VK G    V     +A++++Y
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDV--RAGSALVDMY 208

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTM--IN 281
            +C    DA+  F  + E + VSW   IA                      NE  M  + 
Sbjct: 209 GKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQ------------------NEQYMRGLE 250

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LL        L   +Q+ A   K  F     +G A++ +Y K   + DAR  F  L    
Sbjct: 251 LLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHT 310

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
             + N+M+ G    G   +A+ +F  M    +   G+ + S+    S    +K       
Sbjct: 311 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGI---GFGVVSLSGVFSACAEVK------- 360

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
                GF +D  + + ++  YGKC AL E+  V  E++++++V  N + + L    C+ +
Sbjct: 361 -----GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYED 415

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
            +     +  S  E +  T+  VLKACA +  LE G  +H  A+K+    D FV S V+D
Sbjct: 416 TIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVD 475

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MYCKCG I +A +   +I    L  WN+++ G++ +    E    F++M   GVKPD  T
Sbjct: 476 MYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFT 535

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEGAK 635
           Y  VL SC +   +   +        +HG I + E        + +VD+  + G +  ++
Sbjct: 536 YATVLDSCANLATIELGK-------QIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQ 588

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGN--IDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           +  +++    D   W +++    ++G     L +   ++   + P N +T+V +    + 
Sbjct: 589 LMFEKVQ-KLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAP-NHATFVAVLRACSH 646

Query: 694 AGMWND 699
            G+ +D
Sbjct: 647 VGLLDD 652



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 231/501 (46%), Gaps = 35/501 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K G  +D    + L+  + K      A  F      R+ +++ A+I+G  +  
Sbjct: 184 QIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNE 243

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           Q    L+L  R                 KA   L     +H   +K  FSS   + +  +
Sbjct: 244 QYMRGLELLCR----------------CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIV 287

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + YAK+  +V A   F    +       AM+ G V  G   ++ ++F  M   G+     
Sbjct: 288 DVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVV 347

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           SL+ V  A  +VK            GF   VC  + NAI++LY +C   ++A  +F E+ 
Sbjct: 348 SLSGVFSACAEVK------------GFDVDVC--VRNAILDLYGKCKALVEAYLVFQEME 393

Query: 241 EPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           + D VSW+  IAA     C       L + LR +  + +++T  ++L +  G + L  G 
Sbjct: 394 QRDSVSWNTIIAALEQNECYEDTIVHLNEMLR-SGMEADDFTYGSVLKACAGLQSLEYGL 452

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            +     K G      + + ++ MY KCG + +A  + D +  ++ VSWNS+IAG+S N 
Sbjct: 453 VVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNK 512

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +A   F  ML+  + P+ +T A++L++ +N  +++   Q+H  IIK   L D+ + S
Sbjct: 513 QSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISS 572

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+  Y KC  + +S+ +  ++ K + V  NA+           EALE++     +    
Sbjct: 573 TLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAP 632

Query: 477 NGSTFSIVLKACAAMTDLEQG 497
           N +TF  VL+AC+ +  L+ G
Sbjct: 633 NHATFVAVLRACSHVGLLDDG 653



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 201/423 (47%), Gaps = 27/423 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++  IKN    D ++ T ++  + K     D RRAF   F   N  + T NA++ GL 
Sbjct: 266 QLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAF---FGLPNHTVETCNAMMVGLV 322

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           R      A++LF  +   G+     + S +  AC  ++            GF   V + +
Sbjct: 323 RTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK------------GFDVDVCVRN 370

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K   +V A + F++    D+V++  ++     N  ++ +     EM   G+E 
Sbjct: 371 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEA 430

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++F+  +VL A   ++    G  +HG  +K G   G+   +++ ++++Y +CG   +A+K
Sbjct: 431 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGL--GLDAFVSSTVVDMYCKCGMITEALK 488

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           + D I   ++VSW+  IA         EA   F ++     + + +T   +L S      
Sbjct: 489 LHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLAT 548

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQI     K   +    I + L+ MY KCG + D++ +F+ +   D VSWN+MI G
Sbjct: 549 IELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICG 608

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ +G   +AL+MF    + ++ PN  T  ++L A S+   L    + + H++ S + L+
Sbjct: 609 YALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCR-YFHLMTSRYKLE 667

Query: 412 DSM 414
             +
Sbjct: 668 PQL 670


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 216/692 (31%), Positives = 355/692 (51%), Gaps = 33/692 (4%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL-- 94
           LFD   +R    +N L+       +    L+L+ R+  +  +P A  F   + ACG +  
Sbjct: 107 LFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKD 166

Query: 95  --QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
             Q   I + V    G +S +   S  +  YA+ G I  A   F D  +L    + A++ 
Sbjct: 167 LAQGRSIHYRVATGRGINSSIQ--SALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMS 224

Query: 153 GYVWNGEFDKSKEVFVEM-------RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKV 205
                G   ++ E+F +M       RS  + L   +    L     + +  Q    G +V
Sbjct: 225 ALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRV 284

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFG-- 262
             L        NA++++YVRCG+  +A+++F ++   +VVSW+  IAA A  G  +F   
Sbjct: 285 LVL--------NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVK 336

Query: 263 LFKDLRFNDFQINEYTMINLLSSV---GGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           LF  +       NE T  +++S++   G + IL  G++I +     G      + N+LI+
Sbjct: 337 LFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLIN 396

Query: 320 MYGKCGQVNDARSIFDYLI--FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           MY + G + +AR +FD ++   K  VS+ +MIA Y+ NG   QAL++F  M    + PN 
Sbjct: 397 MYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNE 456

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLS 436
            T A++L A      L     +H  +I+SG    D    + L+  Y KC  L  + RV  
Sbjct: 457 ITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFE 516

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  K+ V    + +  V +  +  AL+LY  +  S    + +T S +L ACA + DL  
Sbjct: 517 TMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAM 576

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS-LAGWNAMMMGYA 555
           G+ IH  AL+++ +QD   ++A+  MY KCG++E A R +R+ CR S +A W +M+  ++
Sbjct: 577 GEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRR-CRGSDVATWTSMLAAHS 635

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           Q G       L+ +M   GV+P+E+T++ VL SC  AGLV E R +   ++  +G  P  
Sbjct: 636 QQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSA 695

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EH+ C+VD+LGR G L  A+  +D MP  PD   WQSLLS+C ++ + ++G  A   LLE
Sbjct: 696 EHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLE 755

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           L P++ S +V LS +YA+AG  +D+ ++++E+
Sbjct: 756 LDPESTSQFVALSQIYAAAGRNSDIDEIKREL 787



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 205/453 (45%), Gaps = 16/453 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +    H    ++   LIS + +      A R   D  +R+++++ ++I+ +A+  
Sbjct: 270 QIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSG 329

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
               A+KLFD +  +G+ P+  T++S+V A   L  + I      +H      G  +   
Sbjct: 330 HYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPI 389

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDN--VAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           + +  I  YA+SG +  A   F   L+     V++T M+  Y  NG   ++ E+F EM +
Sbjct: 390 VQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTA 449

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  NE +   VL A     D+  G  IH   ++ G L        N+++++Y +CG  
Sbjct: 450 RGVAPNEITFATVLAACVAIGDLASGAWIHERMIESG-LDSSDPFAYNSLVDMYAKCGDL 508

Query: 230 LDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++F+ +   D+V+W+  IAA   + +   A  L+  +  +    +  T+  LL + 
Sbjct: 509 GFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVAC 568

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G++I     +    +     NAL +MY KCG +  A  ++      D  +W 
Sbjct: 569 ANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWT 628

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIK 405
           SM+A +S+ G  + AL+++  M    + PN  T   +L + S +  + +  +  HS    
Sbjct: 629 SMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSD 688

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            G         C++   G+   L +++ +L  +
Sbjct: 689 YGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSM 721



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 132/598 (22%), Positives = 254/598 (42%), Gaps = 52/598 (8%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +  G  ++  + + L++ + +      A     D +      +NA++S LA       A+
Sbjct: 177 VATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAI 236

Query: 67  KLFDRL-RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           +LF ++ ++Q              A G L+    +H         +RV +++  I  Y +
Sbjct: 237 ELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVR 296

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G++  A   F D    + V++T+M+     +G +  + ++F  M + G+  NE +  +V
Sbjct: 297 CGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASV 356

Query: 186 ------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
                 LG    +  G +IH      G  +     + N+++N+Y R G   +A ++FD I
Sbjct: 357 VSAIAHLGRDAILDRGRKIHSQITASGIDADPI--VQNSLINMYARSGLLAEAREVFDSI 414

Query: 240 TE--PDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            E    VVS++  IAA A +G   +A  +F+++       NE T   +L++      L +
Sbjct: 415 LENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLAS 474

Query: 295 GKQIQAFCYKVGFMEVVSIG-NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
           G  I     + G         N+L+ MY KCG +  A  +F+ +  KD V+W ++IA   
Sbjct: 475 GAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANV 534

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           ++G    ALD++  ML+  + P+  T++++L A +N   L    ++H   ++S    D  
Sbjct: 535 QSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAH 594

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
             + L   Y KC +L ++ R+       +     ++ +        + ALELY  +    
Sbjct: 595 FQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEG 654

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIED 531
              N  TF  VL +C+    + +G+     ++ + Y      E    ++D+  + G + D
Sbjct: 655 VRPNEVTFIPVLISCSQAGLVAEGREFFH-SITSDYGSQPSAEHFGCMVDVLGRAGKLRD 713

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           A+                                L + M  +   PDEI + ++L+SC
Sbjct: 714 AE-------------------------------ELLDSMPFY---PDEIAWQSLLSSC 737



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 224/487 (45%), Gaps = 22/487 (4%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFND 271
           L   +  +Y RC     A+ +FD + +     W+   +   AA    +   L++ +   +
Sbjct: 87  LGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVEN 146

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV--SIGNALISMYGKCGQVND 329
            Q +    +  + + G  + L  G+ I    Y+V     +  SI +AL++MY +CG+++ 
Sbjct: 147 TQPSACGFMWAIVACGRIKDLAQGRSIH---YRVATGRGINSSIQSALVTMYAQCGRIDL 203

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A + FD      +  WN++++  +  G   +A+++F  M +     +  + A  L A + 
Sbjct: 204 AMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQC--SDRSCAIALGACAA 261

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           +  L+  +Q+H  I          +++ LI+ Y +C  L+E+ RV +++  +N V   ++
Sbjct: 262 AGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSM 321

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD---LEQGKAIHCLALK 506
            + +  +  ++ A++L+  +       N  T++ V+ A A +     L++G+ IH     
Sbjct: 322 IAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITA 381

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS--LAGWNAMMMGYAQHGCYHEVS 564
           +  D D  V++++I+MY + G + +A+  F  I  +S  +  +  M+  YA +G   +  
Sbjct: 382 SGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQAL 441

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM--SDLHGLIPQLEHYACIV 622
            +F +M+  GV P+EIT+  VL +C   G +         M  S L    P    Y  +V
Sbjct: 442 EIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFA--YNSLV 499

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
           D+  + G L  A    + M    D   W ++++A    GN    L    ++L+  + PD 
Sbjct: 500 DMYAKCGDLGFAARVFETMKT-KDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558

Query: 681 ESTYVLL 687
            +   LL
Sbjct: 559 ATLSTLL 565



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 197/474 (41%), Gaps = 47/474 (9%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           NLL   G +R L  G+++ A            +G  +  MY +C   + A ++FD +  +
Sbjct: 55  NLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDR 114

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
               WN ++  +         L+++  M   +  P+       + A    K L Q   +H
Sbjct: 115 RPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH 174

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + + +G  ++ S+ S L+T Y +C  ++ +     +  +      NA+ S L  A  H 
Sbjct: 175 -YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHR 233

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            A+EL+  +     + +  + +I L ACAA   L  G  IH       +   + V +A+I
Sbjct: 234 RAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALI 291

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY +CG +++A R F  +   ++  W +M+   AQ G Y     LF+ M   G+ P+E 
Sbjct: 292 SMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEK 351

Query: 581 TYLAVLTSCCHAG----LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           TY +V+++  H G    L R  + +    +      P +++   ++++  R GLL  A+ 
Sbjct: 352 TYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQN--SLINMYARSGLLAEARE 409

Query: 637 TIDQM----------------------P--------------IPPDAHIWQSLLSACTIY 660
             D +                      P              + P+   + ++L+AC   
Sbjct: 410 VFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAI 469

Query: 661 GNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           G++  G     +++E  L   +   Y  L ++YA  G      ++ + MK K L
Sbjct: 470 GDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDL 523



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 11/255 (4%)

Query: 2   IYSLLIKNG-HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           I+  +I++G    DP    +L+  + K  D   A R     + +D++ +  +I+   +  
Sbjct: 478 IHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSG 537

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +  AL L+DR+   G+ PD  T S+L+ AC   G L   E +H   L+       +  +
Sbjct: 538 NNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQN 597

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                YAK G +  A   +R C   D   +T+M+  +   G    + E++ EM S G+  
Sbjct: 598 ALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRP 657

Query: 178 NEFSLTAVL---GASFDVKEGEQ-IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           NE +   VL     +  V EG +  H      G       H    ++++  R G+  DA 
Sbjct: 658 NEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPS-AEHF-GCMVDVLGRAGKLRDAE 715

Query: 234 KMFDEIT-EPDVVSW 247
           ++ D +   PD ++W
Sbjct: 716 ELLDSMPFYPDEIAW 730



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A++L    N ++L    +VH+HI+      +  +   +   Y +C   + +  +   +  
Sbjct: 54  ANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPD 113

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +     N L    + A    + LELYR +     + +   F   + AC  + DL QG++I
Sbjct: 114 RRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSI 173

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H      R   +  ++SA++ MY +CG I+ A  AF        A WNA+M   A  G +
Sbjct: 174 HYRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHH 232

Query: 561 HEVSNLFNKMSK 572
                LF +M +
Sbjct: 233 RRAIELFFQMEQ 244


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 205/659 (31%), Positives = 332/659 (50%), Gaps = 11/659 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++ NG   + IL T L+  +     F  A    +  +      +N +I G     
Sbjct: 67  QAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMG 126

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q   AL  + ++   G  PD +TF  ++KACG L       +VH     +GF   V++ S
Sbjct: 127 QFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGS 186

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+++G I  A   F      D V +  M+ GYV NG++D +  VF+EMR      
Sbjct: 187 SLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNP 246

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL    +   +  G Q+HG  V  G    + + + N ++ +Y +CG   DA +
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGL--EMDSPVANTLLAMYAKCGHLFDARR 304

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + + D+V+W+  I+         EA  LF ++     + +  T  + L  +     
Sbjct: 305 LFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGAT 364

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR GK+I  +  + G    V + +ALI +Y KC  V  A  IFD     D V   +MI+G
Sbjct: 365 LRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISG 424

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  NG  N AL++F  +L+  +  N  T+AS+L A +   +L    ++H HI+K+G    
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S ++  Y KC  L+ + +    I  K+AV  N++ +         EA++L+R +  
Sbjct: 485 CYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  + +  + S  L ACA +  L  GK IH   ++  +  D+F ESA+IDMY KCG ++ 
Sbjct: 545 AGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A R F  +   +   WN+++  Y  HG   +  NLF+ M   G++PD +T+LA++++C H
Sbjct: 605 ACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGH 664

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           AG V E   Y  CM++  G++ ++EHYAC+VDL GR G L  A   I+ MP  PDA +W
Sbjct: 665 AGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/615 (26%), Positives = 278/615 (45%), Gaps = 17/615 (2%)

Query: 86  SLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           S+++ C     L      H   L  G      L +  +  Y   G  + A+  F      
Sbjct: 51  SILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIH 199
            +  +  M+ G+   G+FD +   + +M   G   ++++   V+   G    V  G  +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---D 256
                +GF   V   + ++++  Y   G   DA  +FD +   D V W+  +       D
Sbjct: 171 DKIQFMGFELDV--FVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
              A G+F ++R  +   N  T   +LS    E ++  G Q+       G      + N 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L++MY KCG + DAR +FD +   D V+WN MI+GY +NGF ++A  +F  M+   + P+
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPD 348

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T +S L  +S   +L+Q  ++H +II++G  LD  + S LI  Y KC  +  + ++  
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFD 408

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           +    + V   A+ S  V    +  ALE++R +       N  T + VL ACA +  L  
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           GK +H   LK  +    +V SA++DMY KCG ++ A + F  I       WN+M+   +Q
Sbjct: 469 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQ 528

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI-PQL 615
           +G   E  +LF +M   G K D ++  A L++C +   +   +   + M  + G     L
Sbjct: 529 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFM--MRGAFRSDL 586

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI--DLGLLAGSKL 673
              + ++D+  + G L+ A    D M    +   W S+++A   +G +   L L  G   
Sbjct: 587 FAESALIDMYSKCGNLDLACRVFDMMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGMLG 645

Query: 674 LELQPDNESTYVLLS 688
             +QPD+ +   ++S
Sbjct: 646 DGIQPDHVTFLAIIS 660



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 17/299 (5%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           SL P    + SIL+  ++   L    Q H+ ++ +G   +  + + L+  Y  C A  ++
Sbjct: 44  SLAPQ---LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           K +  ++    +   N +            AL  Y  + G     +  TF  V+KAC  +
Sbjct: 101 KNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL 160

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             +  G+ +H       ++ D+FV S++I  Y + G I DA+  F ++       WN M+
Sbjct: 161 NSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVML 220

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            GY ++G +   + +F +M +    P+ +T+  VL+ C        +   ++  S LHGL
Sbjct: 221 NGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA-------SEIMINFGSQLHGL 273

Query: 612 IPQ--LEHYACIVDLL----GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           +    LE  + + + L     + G L  A+   D MP   D   W  ++S     G +D
Sbjct: 274 VVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTWNGMISGYVQNGFMD 331


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 212/736 (28%), Positives = 364/736 (49%), Gaps = 44/736 (5%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSL 87
             +  RA  +L       I   +     L R C+       + R R +G R   +++ S+
Sbjct: 84  LGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCE-------WKRARKEGSR--VYSYVSI 134

Query: 88  VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
             +  SLQ                   L +  +  + + G +V A   F      +  ++
Sbjct: 135 SMSHLSLQ-------------------LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSW 175

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVK 204
             +V GY   G FD++ +++  M  +G++ + ++   VL   G   ++  G +IH   ++
Sbjct: 176 NVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIR 235

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGV 258
            GF S V   + NA++ +YV+CG    A  +FD++   D +SW+  I+         +G+
Sbjct: 236 YGFESDV--DVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGL 293

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
             FG+      +   +   ++I     +G +R+   G+QI  +  +  F    SI N+LI
Sbjct: 294 RLFGMMIKYPVDPDLMTMTSVITACELLGDDRL---GRQIHGYVLRTEFGRDPSIHNSLI 350

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY   G + +A ++F     +D VSW +MI+GY       +AL+ +  M    ++P+  
Sbjct: 351 PMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEI 410

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+A +L A S   +L   M +H    + G +    + + LI  Y KC  ++++  +    
Sbjct: 411 TIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHST 470

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            +KN V   ++   L   +   EAL  +R +    +  N  T   VL ACA +  L  GK
Sbjct: 471 LEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLKP-NSVTLVCVLSACARIGALTCGK 529

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH  AL+     D F+ +A++DMY +CG +E A + F  +  + +  WN ++ GYA+ G
Sbjct: 530 EIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHE-VTSWNILLTGYAERG 588

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
                + LF +M +  V P+E+T++++L +C  +G+V E   Y + M   + ++P L+HY
Sbjct: 589 KGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHY 648

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
           AC+VDLLGR G LE A   I +MP+ PD  +W +LL++C I+ +++LG LA   + +   
Sbjct: 649 ACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDT 708

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
            +   Y+LLSNLYA  G W+ V ++RK M++  L  +PG SW+ V G  H F + D+ H 
Sbjct: 709 TSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHP 768

Query: 739 QSKEIYKELIKLYEHM 754
           Q KEI   L + Y+ M
Sbjct: 769 QIKEINALLERFYKKM 784



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 266/562 (47%), Gaps = 15/562 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++YS +  +  HL   L   L+S F +F +   A+      + R++ ++N L+ G A+  
Sbjct: 127 RVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAG 186

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               AL L+ R+ + G++PD +TF  +++ CG   +L     +H   ++ GF S V +V+
Sbjct: 187 LFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVN 246

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G++ +A + F    + D +++ AM+ GY  NG   +   +F  M    ++ 
Sbjct: 247 ALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDP 306

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++T+V+ A     D + G QIHG+ ++  F  G    ++N+++ +Y   G   +A  
Sbjct: 307 DLMTMTSVITACELLGDDRLGRQIHGYVLRTEF--GRDPSIHNSLIPMYSSVGLIEEAET 364

Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F      D+VSW+  I+   + +   +A   +K +       +E T+  +LS+      
Sbjct: 365 VFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCN 424

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G  +     + G +    + N+LI MY KC  ++ A  IF   + K+ VSW S+I G
Sbjct: 425 LDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILG 484

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
              N    +AL  F  M+   L PN  T+  +L A +   +L    ++H+H +++G   D
Sbjct: 485 LRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFD 543

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             M + ++  Y +C  +  + +    +D +     N L +        A A EL++ +  
Sbjct: 544 GFMPNAILDMYVRCGRMEYAWKQFFSVDHE-VTSWNILLTGYAERGKGAHATELFQRMVE 602

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           S    N  TF  +L AC+    + +G +  + +  K     ++   + V+D+  + G +E
Sbjct: 603 SNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLE 662

Query: 531 DAKRAFRKI-CRDSLAGWNAMM 551
           +A    +K+  +   A W A++
Sbjct: 663 EAYEFIQKMPMKPDPAVWGALL 684


>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 215/688 (31%), Positives = 359/688 (52%), Gaps = 20/688 (2%)

Query: 86  SLVKACG---SLQENEIVHGVCLKL--GFSSR-VYLVSGFIENYAKSGEIVSAEMCFRDC 139
           SL++ C    SL+E   +H + L     F+S+  ++ +  +  YA+ G +  + + F   
Sbjct: 15  SLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKM 74

Query: 140 LDLDNVAYTAMVCGY--VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE--- 194
                V+Y A++  Y          + E++ +M + GL  +  + T++L AS  ++    
Sbjct: 75  PRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWF 134

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G  +H  G K+G L+ +C  L  +++N+Y  CG    A  +F ++ + D V+W+  I   
Sbjct: 135 GSSLHAKGFKLG-LNDIC--LQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGY 191

Query: 255 CDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                  E   LF  +    F   ++T   +L+S    +  R+G+ I A          +
Sbjct: 192 LKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDL 251

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + NAL+ MY   G +  A  IF  +   D VSWNSMIAGYSEN    +A+++F  + E 
Sbjct: 252 HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEM 311

Query: 372 SLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
               P+ YT A I+ A     S      +H+ +IK+GF     + S L++ Y K +  + 
Sbjct: 312 CFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDA 371

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           + RV   I  K+ V    + +     +    A+  +  +     EV+    S V+ ACA 
Sbjct: 372 AWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACAN 431

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           +  L QG+ IHC A+K  YD ++ V  ++IDMY K G++E A   F ++    L  WN+M
Sbjct: 432 LAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSM 491

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + GY+ HG   E   +F ++ K G+ PD++T+L++L++C H+ LV + +   + M+ + G
Sbjct: 492 LGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSI-G 550

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNIDLGLLA 669
           LIP L+HY+C+V L  R  LLE A+  I++ P I  +  +W++LLSAC I  N  +G+ A
Sbjct: 551 LIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHA 610

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
             ++L L+ ++  T VLLSNLYA+A  W+ V ++R+ M+   L K PG SWI      H 
Sbjct: 611 AEEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIEAKNDIHV 670

Query: 730 FYAGDSSHSQSKEIYKELIKLYEHMVAT 757
           F +GD SH ++ E++ EL +L  +M+ T
Sbjct: 671 FSSGDQSHPKADEVHAELHRLKRNMIRT 698



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 263/551 (47%), Gaps = 17/551 (3%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP--ALKLFDRL 72
           P +   ++S + +      +         R I++YNAL++  +R   +    AL+L+ ++
Sbjct: 48  PFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALELYTQM 107

Query: 73  RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              GLRP + TF+SL++A   L+       +H    KLG +  + L +  +  Y+  G++
Sbjct: 108 VTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGLND-ICLQTSLLNMYSNCGDL 166

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
            SAE+ F D +D D+VA+ +++ GY+ N + ++   +F++M S+G    +F+   VL + 
Sbjct: 167 SSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSC 226

Query: 190 F---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
               D + G  IH   +       +  HL NA++++Y   G    A ++F  +  PD+VS
Sbjct: 227 SRLKDYRSGRLIHAHVIVRNVSLDL--HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVS 284

Query: 247 WSERIAAAC---DGVEAFGLFKDLRFNDF-QINEYTMINLLSSVGGERILRAGKQIQAFC 302
           W+  IA      DG +A  LF  L+   F + ++YT   ++S+ G       GK + A  
Sbjct: 285 WNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEV 344

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K GF   V +G+ L+SMY K  + + A  +F  +  KD V W  MI GYS+      A+
Sbjct: 345 IKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAI 404

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
             F  M+      + Y ++ ++ A +N   L+Q   +H + +K G+ ++ S+   LI  Y
Sbjct: 405 RCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMY 464

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            K  +L  +  V S++ + +    N++     +     EAL+++  I       +  TF 
Sbjct: 465 AKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFL 524

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK--IC 540
            +L AC+    +EQGK +            +   S ++ ++ +   +E+A+    K    
Sbjct: 525 SLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYI 584

Query: 541 RDSLAGWNAMM 551
            D+L  W  ++
Sbjct: 585 EDNLELWRTLL 595



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/543 (23%), Positives = 255/543 (46%), Gaps = 43/543 (7%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L T+L++ ++   D   A    +D  +RD + +N+LI G  +  +    + LF ++ 
Sbjct: 149 DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMM 208

Query: 74  YQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G  P  FT+  ++ +C  L++     ++H   +    S  ++L +  ++ Y  +G + 
Sbjct: 209 SVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQ 268

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVLGAS 189
           +A   F    + D V++ +M+ GY  N + +K+  +FV+++ +   + ++++   ++ A+
Sbjct: 269 TAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISAT 328

Query: 190 ---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                   G+ +H   +K GF   V   + + ++++Y +  +   A ++F  I+  DVV 
Sbjct: 329 GVFPSSSYGKSLHAEVIKTGFERSV--FVGSTLVSMYFKNHESDAAWRVFCSISVKDVVL 386

Query: 247 WSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+E I   +   DG+ A   F  +     ++++Y +  ++++     +LR G+ I  +  
Sbjct: 387 WTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAV 446

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+G+   +S+  +LI MY K G +  A  +F  +   D   WNSM+ GYS +G   +AL 
Sbjct: 447 KLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQ 506

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  +L+  LIP+  T  S+L A S+S+ ++Q   + +++   G +      SC++T + 
Sbjct: 507 VFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFS 566

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           +   L E++ +   I+K   +  N               LEL+RT+  +C  V    F +
Sbjct: 567 RAALLEEAEEI---INKSPYIEDN---------------LELWRTLLSAC--VINKNFKV 606

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            + A           A   L LKA     + + S +     K   + + +R  R +  D 
Sbjct: 607 GIHA-----------AEEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDK 655

Query: 544 LAG 546
             G
Sbjct: 656 YPG 658



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 172/344 (50%), Gaps = 12/344 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ +I     LD  L   L+  +    + + A+R     +N D++++N++I+G +    
Sbjct: 238 IHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENED 297

Query: 62  SGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVS 117
              A+ LF +L+     +PD +T++ ++ A G    +   + +H   +K GF   V++ S
Sbjct: 298 GEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGS 357

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K+ E  +A   F      D V +T M+ GY    +   +   F +M   G E+
Sbjct: 358 TLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEV 417

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +++ L+ V+ A  +   +++GE IH + VK+G+   V   ++ +++++Y + G    A  
Sbjct: 418 DDYVLSGVVNACANLAVLRQGEIIHCYAVKLGY--DVEMSVSGSLIDMYAKNGSLEAAYL 475

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F +++EPD+  W+  +   +  G+  EA  +F+++       ++ T ++LLS+    R+
Sbjct: 476 VFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRL 535

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           +  GK +  +   +G +  +   + +++++ +   + +A  I +
Sbjct: 536 VEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIIN 579


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 199/637 (31%), Positives = 338/637 (53%), Gaps = 29/637 (4%)

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           GF+E    SG + +A   F      D   +  ++ GY  NG F ++ + +  M   G+  
Sbjct: 67  GFVE----SGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRS 122

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+   V+   G    +  G+++HG  +K+GF   V  ++ N ++++Y++ G    A K
Sbjct: 123 DNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDV--YVCNFLIDMYLKIGFIELAEK 180

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FDE+   D+VSW+  ++      DG+ +   FK++     + + + MI+ L +   E  
Sbjct: 181 VFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHC 240

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           LR+G +I     +      + +  +LI MYGKCG+V+ A  +F+ +  K+ V+WN+MI G
Sbjct: 241 LRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG 300

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             E+                 +IP+  TM ++L + S S +L +   +H   I+  FL  
Sbjct: 301 MQEDD---------------KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY 345

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  YGKC  L  ++ V +++++KN V  N + +  V    + EAL++++ I  
Sbjct: 346 LVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN 405

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              + +  T + VL A A +    +GK IH   +K     + F+ +A++ MY KCG ++ 
Sbjct: 406 EPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQT 465

Query: 532 AKRAFR-KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           A+  F   +C+D +  WN M+M YA HG        F++M   G KP+  T++++LT+C 
Sbjct: 466 AREFFDGMVCKD-VVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACS 524

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
            +GL+ E   + + M   +G+ P +EHY C++DLLGR G L+ AK  I++MP+ P A IW
Sbjct: 525 ISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIW 584

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            SLL+A   + ++ L  LA   +L L+ DN   YVLLSN+YA AG W DV +++  MKE+
Sbjct: 585 GSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQ 644

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            L K  G S + + G +  F   D SH+ +  IY  L
Sbjct: 645 GLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVL 681



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/577 (27%), Positives = 278/577 (48%), Gaps = 47/577 (8%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---S 93
           +F+  N  D   +N +I G         A+  + R+  +G+R D FTF  ++KACG   +
Sbjct: 80  MFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLA 139

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L   + VHG  +K+GF   VY+ +  I+ Y K G I  AE  F +    D V++ +MV G
Sbjct: 140 LMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSG 199

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFD--VKEGEQIHGFGVKVGFLSG 210
           Y  +G+   S   F EM  LG + + F + + LGA S +  ++ G +IH   ++      
Sbjct: 200 YQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELD 259

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFN 270
           +   +  +++++Y +CG+   A ++F+ I   ++V+W+  I          G+ +D   +
Sbjct: 260 IM--VQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIG---------GMQED---D 305

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
               +  TMINLL S      L  GK I  F  +  F+  + +  AL+ MYGKCG++  A
Sbjct: 306 KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLA 365

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F+ +  K+ VSWN+M+A Y +N  + +AL MF H+L   L P+  T+AS+L AV+  
Sbjct: 366 EHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAEL 425

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            S  +  Q+HS+I+K G   +  + + ++  Y KC  L  ++     +  K+ V  N + 
Sbjct: 426 ASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMI 485

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
                      +++ +  + G   + NGSTF  +L AC+    +++G      ++K  Y 
Sbjct: 486 MAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFN-SMKVEYG 544

Query: 511 QDIFVE--SAVIDMYCKCGTIEDAK----------------------RAFRKICRDSLAG 546
            D  +E    ++D+  + G +++AK                      R    +    LA 
Sbjct: 545 IDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAA 604

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            + + + +   GCY  +SN++ +  ++    D I YL
Sbjct: 605 RHILSLKHDNTGCYVLLSNMYAEAGRWE-DVDRIKYL 640



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 233/543 (42%), Gaps = 60/543 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  LIK G  LD  +   LI  + K      A +   +   RD++++N+++SG     
Sbjct: 145 KVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDG 204

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               +L  F  +   G + D F   S + AC     L+    +H   ++      + + +
Sbjct: 205 DGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQT 264

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G++  AE  F      + VA+ AM+ G     E DK     + M       
Sbjct: 265 SLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM---QEDDKVIPDVITM------- 314

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
              +L      S  + EG+ IHGF ++  FL  +   L  A++++Y +CG+   A  +F+
Sbjct: 315 --INLLPSCSQSGALLEGKSIHGFAIRKMFLPYLV--LETALVDMYGKCGELKLAEHVFN 370

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++ E ++VSW+  +AA        EA  +F+ +     + +  T+ ++L +V        
Sbjct: 371 QMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSE 430

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQI ++  K+G      I NA++ MY KCG +  AR  FD ++ KD VSWN+MI  Y+ 
Sbjct: 431 GKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAI 490

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDS 413
           +GF   ++  F  M      PNG T  S+L A S S  + +     +S  ++ G      
Sbjct: 491 HGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIE 550

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT--IWG 471
              C++   G+   L+E+K                         C  E + L  T  IWG
Sbjct: 551 HYGCMLDLLGRNGNLDEAK-------------------------CFIEEMPLVPTARIWG 585

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S    + +   +VL   AA          H L+LK     +      + +MY + G  ED
Sbjct: 586 SLLAASRNHNDVVLAELAAR---------HILSLK---HDNTGCYVLLSNMYAEAGRWED 633

Query: 532 AKR 534
             R
Sbjct: 634 VDR 636



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 157/364 (43%), Gaps = 60/364 (16%)

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-----LEFSLIPNGY------ 378
           +++ F  L   + ++    + G+ E+G    ALDMF  M       +++I  GY      
Sbjct: 46  SKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLF 105

Query: 379 --------------------TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
                               T   +++A     +L    +VH  +IK GF LD  + + L
Sbjct: 106 QEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFL 165

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y K   +  +++V  E+  ++ V  N++ S          +L  ++ +     + + 
Sbjct: 166 IDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADR 225

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
                 L AC+    L  G  IHC  +++  + DI V++++IDMY KCG ++ A+R F +
Sbjct: 226 FGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNR 285

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           I   ++  WNAM+ G  +                  V PD IT + +L SC  +G + E 
Sbjct: 286 IYSKNIVAWNAMIGGMQEDD---------------KVIPDVITMINLLPSCSQSGALLEG 330

Query: 599 RTYLSCMSDLHG------LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           ++       +HG       +P L     +VD+ G+ G L+ A+   +QM    +   W +
Sbjct: 331 KS-------IHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMN-EKNMVSWNT 382

Query: 653 LLSA 656
           +++A
Sbjct: 383 MVAA 386


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 214/723 (29%), Positives = 345/723 (47%), Gaps = 64/723 (8%)

Query: 40  DTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA--FTFSSLVKACG---SL 94
           +T +  I  YN  I    RFC+ G  L+    L  Q  +PD    T+ S+++ C    S+
Sbjct: 62  ETIDCKITDYNIEI---CRFCELG-NLRRAMELINQSPKPDLELRTYCSVLQLCADLKSI 117

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           Q+   +H +           L S  +  Y   G++      F    +     +  ++ GY
Sbjct: 118 QDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGY 177

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH 214
              G F +S  +F  MR LG+   E                                   
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRVE----------------------------------- 202

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLRFND 271
                            A K+FDE+ + DV+SW+  I+    +G+   GL  F+ +    
Sbjct: 203 ----------------SARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
              +  TM+++++      +L  G+ +  +  K  F + +++ N L+ MY K G +N A 
Sbjct: 247 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 306

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +F+ +  +  VSW SMIAGY+  G  + ++ +F  M +  + P+ +T+ +IL A + + 
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 366

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L+    VH++I ++    D  + + L+  Y KC ++ ++  V SE+  K+ V  N +  
Sbjct: 367 LLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIG 426

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                S   EAL L+  +  + +  N  T + +L ACA++  LE+G+ IH   L+  +  
Sbjct: 427 GYSKNSLPNEALNLFVEMQYNSKP-NSITMACILPACASLAALERGQEIHGHILRNGFSL 485

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D  V +A++DMY KCG +  A+  F  I    L  W  M+ GY  HG   E    FN+M 
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR 545

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             G++PDE++++++L +C H+GL+ E   + + M +   + P+ EHYACIVDLL R G L
Sbjct: 546 NSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNL 605

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
             A   I  MPI PDA IW +LL  C IY ++ L       + EL+P+N   YVLL+N+Y
Sbjct: 606 SKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIY 665

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A A  W +V KLR+ +  + L K PG SWI + G  H F  GDSSH  + +I   L K  
Sbjct: 666 AEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTR 725

Query: 752 EHM 754
             M
Sbjct: 726 TRM 728



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 190/371 (51%), Gaps = 13/371 (3%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--- 91
           R LFD   +RD+I++N++ISG      S   L LF+++   G+  D  T  S+V  C   
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNT 264

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           G L     +HG  +K  F   + L +  ++ Y+KSG + SA   F    +   V++T+M+
Sbjct: 265 GMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 324

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFL 208
            GY   G  D S  +F EM   G+  + F++T +L A   +  ++ G+ +H +  +    
Sbjct: 325 AGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQ 384

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFK 265
           S +   ++NA+M++Y +CG   DA  +F E+   D+VSW+  I          EA  LF 
Sbjct: 385 SDL--FVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFV 442

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           ++++N  + N  TM  +L +      L  G++I     + GF     + NAL+ MY KCG
Sbjct: 443 EMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCG 501

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            +  AR +FD +  KD VSW  MIAGY  +G+ ++A+  F  M    + P+  +  SIL 
Sbjct: 502 ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILY 561

Query: 386 AVSNSKSLKQA 396
           A S+S  L + 
Sbjct: 562 ACSHSGLLDEG 572



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 149/288 (51%), Gaps = 12/288 (4%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L+  L+  ++K  +   A +       R ++++ ++I+G AR   S  +++LF  +  +G
Sbjct: 288 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG 347

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           + PD FT ++++ AC   G L+  + VH    +    S +++ +  ++ YAK G +  A 
Sbjct: 348 ISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-- 191
             F +    D V++  M+ GY  N   +++  +FVEM+    + N  ++  +L A     
Sbjct: 408 SVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLA 466

Query: 192 -VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            ++ G++IHG  ++ GF   +  H+ NA++++Y++CG    A  +FD I E D+VSW+  
Sbjct: 467 ALERGQEIHGHILRNGF--SLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 524

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           IA       G EA   F ++R +  + +E + I++L +     +L  G
Sbjct: 525 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 168/456 (36%), Positives = 264/456 (57%), Gaps = 1/456 (0%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R L+ G+ I A      F + + + N +++MY KCG + +A+ +FD +  KD VSW  +I
Sbjct: 119 RKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLI 178

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GYS++G  ++AL +F  ML     PN +T++S+L+A     S     Q+H+  +K G+ 
Sbjct: 179 SGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           ++  + S L+  Y +   + E+K + + +  KN V  NAL +           + L+  +
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM 298

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                E    T+S V  ACA+   LEQGK +H   +K+      ++ + +IDMY K G+I
Sbjct: 299 LRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 358

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           +DAK+ FR++ +  +  WN+++ GYAQHG   E   LF +M K  V+P+EIT+L+VLT+C
Sbjct: 359 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 418

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E + Y   M   H +  Q+ H+  +VDLLGR G L  A   I++MPI P A +
Sbjct: 419 SHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 477

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL +C ++ N+DLG+ A  ++ EL P +   +VLLSN+YASAG  +D  K+RK MKE
Sbjct: 478 WGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 537

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
             + KEP  SW+ +    H F A D SH   +EI +
Sbjct: 538 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQR 573



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 189/364 (51%), Gaps = 6/364 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +K+G  IH       F   +   L N I+N+Y +CG   +A  +FD++   D+VSW+  I
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLV--LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLI 178

Query: 252 AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +    +    EA  LF  +    FQ NE+T+ +LL + G       G+Q+ AF  K G+ 
Sbjct: 179 SGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +G++L+ MY +   + +A+ IF+ L  K+ VSWN++IAG++  G     + +F  M
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM 298

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L     P  +T +S+  A ++S SL+Q   VH+H+IKSG      + + LI  Y K  ++
Sbjct: 299 LRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 358

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++K+V   + K++ V  N++ S        AEAL+L+  +  +  + N  TF  VL AC
Sbjct: 359 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 418

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGW 547
           +    L++G+    L  K + +  +     V+D+  + G + +A +   ++  + + A W
Sbjct: 419 SHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVW 478

Query: 548 NAMM 551
            A++
Sbjct: 479 GALL 482



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 188/385 (48%), Gaps = 11/385 (2%)

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           L + D +    L P+   +S ++  C     L++   +H       F   + L++  +  
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAK G +  A+  F      D V++T ++ GY  +G+  ++  +F +M  LG + NEF+L
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 183 TAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
           +++L AS        G Q+H F +K G+   V  H+ ++++++Y R     +A  +F+ +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNV--HVGSSLLDMYARWAHMREAKVIFNSL 267

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              +VVSW+  IA      +G     LF  +    F+   +T  ++ ++      L  GK
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK 327

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            + A   K G   +  IGN LI MY K G + DA+ +F  L+ +D VSWNS+I+GY+++G
Sbjct: 328 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 387

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +AL +F  ML+  + PN  T  S+L A S+S  L +       + K       +   
Sbjct: 388 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 447

Query: 417 CLITTYGKCNALNESKRVLSEIDKK 441
            ++   G+   LNE+ + + E+  K
Sbjct: 448 TVVDLLGRAGRLNEANKFIEEMPIK 472



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 169/347 (48%), Gaps = 12/347 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +L   +++ + K      A         +D++++  LISG ++  Q+  AL LF ++ 
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           + G +P+ FT SSL+KA G   S      +H   LK G+   V++ S  ++ YA+   + 
Sbjct: 199 HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMR 258

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A++ F      + V++ A++ G+   GE +    +F++M   G E   F+ ++V  A  
Sbjct: 259 EAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACA 318

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            S  +++G+ +H   +K G       ++ N ++++Y + G   DA K+F  + + D+VSW
Sbjct: 319 SSGSLEQGKWVHAHVIKSG--GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 376

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I+       G EA  LF+ +     Q NE T +++L++     +L  G+       K
Sbjct: 377 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK 436

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIA 350
                 V+    ++ + G+ G++N+A    + +  K + + W +++ 
Sbjct: 437 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLG 483



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 160/330 (48%), Gaps = 5/330 (1%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           SL P     + +L   +  + LKQ   +H+HI  S F  D  +++ ++  Y KC +L E+
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           + +  ++  K+ V    L S    +   +EAL L+  +     + N  T S +LKA    
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
                G+ +H  +LK  YD ++ V S+++DMY +   + +AK  F  +   ++  WNA++
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G+A+ G    V  LF +M + G +P   TY +V T+C  +G + + + ++       G 
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK-WVHAHVIKSGG 338

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P       ++D+  + G ++ AK    ++ +  D   W S++S    +G     L    
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFE 397

Query: 672 KLL--ELQPDNESTYVLLSNLYASAGMWND 699
           ++L  ++QP NE T++ +    + +G+ ++
Sbjct: 398 QMLKAKVQP-NEITFLSVLTACSHSGLLDE 426



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 134/254 (52%), Gaps = 9/254 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K G+ ++  + ++L+  + ++A  R A         ++++++NALI+G AR  
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 286

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +    ++LF ++  QG  P  FT+SS+  AC   GSL++ + VH   +K G     Y+ +
Sbjct: 287 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 346

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAKSG I  A+  FR  +  D V++ +++ GY  +G   ++ ++F +M    ++ 
Sbjct: 347 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 406

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE +  +VL A   S  + EG+       K    + V +H+   +++L  R G+  +A K
Sbjct: 407 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVT--VVDLLGRAGRLNEANK 464

Query: 235 MFDEIT-EPDVVSW 247
             +E+  +P    W
Sbjct: 465 FIEEMPIKPTAAVW 478



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 124/276 (44%), Gaps = 8/276 (2%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E   + +S +L  C  +  L+QG+AIH     + ++ D+ + + +++MY KCG++E+A+ 
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F K+    +  W  ++ GY+Q G   E   LF KM   G +P+E T L+ L      G 
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFT-LSSLLKASGTGP 220

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
                  L   S  +G    +   + ++D+  R   +  AK+  + +    +   W +L+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALI 279

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK-EMKEKFLC 713
           +     G  +  +    ++L  +   E T+   S+++ +       G L + +     + 
Sbjct: 280 AGHARKGEGEHVMRLFLQML--RQGFEPTHFTYSSVFTACA---SSGSLEQGKWVHAHVI 334

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           K  G    ++G      YA   S   +K++++ L+K
Sbjct: 335 KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 370


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 202/715 (28%), Positives = 370/715 (51%), Gaps = 28/715 (3%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           ++    K    R A R   D      + +NA +SG  R  + G A+++F  + +    P+
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60

Query: 81  AFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
           +FT+S  + AC + +E  +   VHG+ L+      V++ +  +  YAK G++ +A   F 
Sbjct: 61  SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKE 194
                + V++T  + G+V + E   +  +  EM   G+ +N+++ T++L A      V+E
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180

Query: 195 GEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDVVSWSERIA 252
             QIHG  +K   +L  V   +  A+++ Y   G    + K+F+E  T  +   WS  I+
Sbjct: 181 ASQIHGMVLKTEMYLDCV---VKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFIS 237

Query: 253 AACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
              +   + +  L + +     + N+    ++ SSV     +  G Q+ +   K GF+  
Sbjct: 238 GVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHG 294

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           + +G+AL +MY +C  V D+  +F+ +  +D VSW +M+AG++ +G   +A   F +M+ 
Sbjct: 295 ILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMIL 354

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK----SGFLLDDSMISCLITTYGKCN 426
               P+  ++ +IL A +  + L +  +VH H ++    + F+ D     C I+ Y KC 
Sbjct: 355 DGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFIND-----CFISMYSKCQ 409

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            +  ++R+     +K+ V  +++ S      C  EA+ L++ +  +   ++    S +L 
Sbjct: 410 GVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILS 469

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            CA +      K +H  A+KA    D  V S+++ +Y + G ++D+++ F +I    L  
Sbjct: 470 LCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVA 529

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W  ++ GYAQHG       +F+ M + GV+PD +  ++VL++C   GLV +   Y + M 
Sbjct: 530 WTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMR 589

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             +G+ P+L+HY C+VDLLGR G L  AK  +D MP+ PD  +W +LL+AC ++ +  LG
Sbjct: 590 TAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLG 649

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
               +K+ E   D+ S +  LSN+ A++G W +V ++RK MK   + KEPG+S +
Sbjct: 650 RFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKTMKG--VNKEPGWSMV 701



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 239/503 (47%), Gaps = 11/503 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L+++     D  + T+L++ + K  D   A R  +    R+++++   I+G  +  +
Sbjct: 83  VHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDE 142

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              A+ L   +   G+  + +T +S++ AC  +   +E   +HG+ LK        +   
Sbjct: 143 PVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEA 202

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I  Y   G I  +E  F +   + N + ++A + G V N    +S ++   M   GL  
Sbjct: 203 LISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFHQGLRP 261

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           N+    +V  +   ++ G Q+H   +K GF+ G+   + +A+  +Y RC    D+ K+F+
Sbjct: 262 NDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGIL--VGSALSTMYSRCDNVQDSYKVFE 319

Query: 238 EITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           E+ E D VSW+  +A  A  G  VEAF  F+++  + F+ +  ++  +LS+      L  
Sbjct: 320 EMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLK 379

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GK++     +V + E   I +  ISMY KC  V  AR IFD    KD V W+SMI+GY+ 
Sbjct: 380 GKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYAT 438

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG   +A+ +F  M+  S+  + Y  +SIL   ++         +H + IK+G L D S+
Sbjct: 439 NGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSV 498

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S L+  Y +   +++S++V  EI   + V    +            AL ++  +     
Sbjct: 499 SSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGV 558

Query: 475 EVNGSTFSIVLKACAAMTDLEQG 497
             +      VL AC+    +EQG
Sbjct: 559 RPDTVVLVSVLSACSRNGLVEQG 581



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 247/512 (48%), Gaps = 29/512 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
           QI+ +++K   +LD ++   LIS +T F       + F       NR I  ++A ISG++
Sbjct: 183 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVS 240

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
                  +++L  R+ +QGLRP+   ++S+  +  S++    +H   +K GF   + + S
Sbjct: 241 NHSLL-RSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGS 299

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---G 174
                Y++   +  +   F +  + D V++TAMV G+  +G    S E F+  R++   G
Sbjct: 300 ALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGH---SVEAFLTFRNMILDG 356

Query: 175 LELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            + +  SLTA+L A    +   +G+++HG  ++V    G    +N+  +++Y +C     
Sbjct: 357 FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV---YGETTFINDCFISMYSKCQGVQT 413

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD     D V WS  I+       G EA  LF+ +     +I+ Y   ++LS    
Sbjct: 414 ARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCAD 473

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                  K +  +  K G +   S+ ++L+ +Y + G ++D+R +FD +   D V+W ++
Sbjct: 474 IARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTI 533

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY+++G    AL MF  M++  + P+   + S+L A S +  ++Q    + + +++ +
Sbjct: 534 IDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFN-YFNSMRTAY 592

Query: 409 LLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
            ++  +    C++   G+   L E+K  +  +  K  + +   +++L     H + + L 
Sbjct: 593 GVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMV--WSTLLAACRVHDDTV-LG 649

Query: 467 RTIWGSCREVN--GSTFSIVLKACAAMTDLEQ 496
           R +    RE N    +F+ +    A   D E+
Sbjct: 650 RFVENKIREGNYDSGSFATLSNILANSGDWEE 681


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/580 (33%), Positives = 310/580 (53%), Gaps = 18/580 (3%)

Query: 176 ELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            LN    TA+   S  +K   QIH   +   + S     L N ++NLY +CG    A+ +
Sbjct: 144 HLNHLLNTAIQTRS--LKHATQIHTQIIINNYTS--LPFLFNNLINLYAKCGCLNQALLL 199

Query: 236 FDEITE---PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           F  IT      +V+W+  I         ++A  LF  +R +    N++T  ++LS+    
Sbjct: 200 FS-ITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAAT 258

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            ++  G+Q+ +  +K GF   + +G AL+ MY KC  ++ A  +FD +  ++ VSWNSMI
Sbjct: 259 MMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMI 318

Query: 350 AGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            G+  N  +++A+ +F  +L E ++IPN  +++S+L A +N   L    QVH  ++K G 
Sbjct: 319 VGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGL 378

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           +    +++ L+  Y KC   +E  ++   +  ++ V  N L    V      EA   +  
Sbjct: 379 VPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYF-- 436

Query: 469 IWGSCRE---VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            W   RE    + ++FS VL + A++  L QG AIH   +K  Y +++ +  ++I MY K
Sbjct: 437 -WVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAK 495

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG++ DA + F  I   ++  W AM+  Y  HGC ++V  LF  M   G++P  +T++ V
Sbjct: 496 CGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCV 555

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C H G V E   + + M  +H + P  EHYAC+VDLLGR G L+ AK  I+ MP+ P
Sbjct: 556 LSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKP 615

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
              +W +LL AC  YGN+ +G  A  +L E++P N   YVLL+N+   +G   +  ++R+
Sbjct: 616 TPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRR 675

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
            M    + KEPG SWI V   T  F A D SHS S EIYK
Sbjct: 676 LMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 715



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 233/455 (51%), Gaps = 17/455 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLAR 58
           QI++ +I N +   P L   LI+ + K     +A      T +  + I+T+ +LI+ L+ 
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSH 222

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
           F     AL LF+++R  G  P+ FTFSS++ A  +   +   + +H +  K GF + +++
Sbjct: 223 FNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSLG 174
            +  ++ YAK  ++ SA   F    + + V++ +M+ G+  N  +D++  VF + +R   
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT 342

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  NE S+++VL A  +   +  G Q+HG  VK G +     ++ N++M++Y +C    +
Sbjct: 343 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVP--LTYVMNSLMDMYFKCRFFDE 400

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
            VK+F  + + DVV+W+  +          EA   F  +R      +E +   +L S   
Sbjct: 401 GVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSAS 460

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G  I     K+G+++ + I  +LI+MY KCG + DA  +F+ +   + +SW +M
Sbjct: 461 LAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAM 520

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+ Y  +G  NQ +++F HML   + P+  T   +L A S++  +++ +  H + +K   
Sbjct: 521 ISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGL-AHFNSMKKIH 579

Query: 409 LLD--DSMISCLITTYGKCNALNESKRVLSEIDKK 441
            ++      +C++   G+   L+E+KR +  +  K
Sbjct: 580 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMK 614


>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
 gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
          Length = 551

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 182/533 (34%), Positives = 301/533 (56%), Gaps = 6/533 (1%)

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           K G  IH   +  GF S +  HL+  ++  Y + G  + A K+FD + E  VVSWS +I+
Sbjct: 14  KPGHLIHNQILTNGFASNI--HLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQIS 71

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                    +A  +F D+    F+ N++T  ++L +  G R L+ G QIQ    K  F  
Sbjct: 72  GYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFAS 131

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + +AL+ ++ KCG++ DA  +F  +  +D VSWN++I  Y+  GF   +  MF  M+
Sbjct: 132 NLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMM 191

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  + P+ +T  S+L+A   +  + +  Q+H  II+ G+    S+   LI  Y KC +L 
Sbjct: 192 QEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLA 251

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVNGSTFSIVLKAC 488
            +  +   +  K+ +   AL +     S ++ +AL+L++ I     +++      +   C
Sbjct: 252 SAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNIC 311

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A ++ L  G+ IH LALK +   D+ + +A+IDMY K G I+DA RAF ++   ++  W 
Sbjct: 312 ANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWT 371

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ GY  HG  HE   LF KM   G+KP++IT+L++L +C H GL  E     + M   
Sbjct: 372 SLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISK 431

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           + ++P+ EH++C+VDL  R GLLE A   I++M I P+A +W ++L AC IYGN+ L   
Sbjct: 432 YNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEE 491

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           A   L ++ P+N   YV+L+++YA+AG W++  K+RK M+E+ L K PGYS+I
Sbjct: 492 AAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFI 544



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 221/455 (48%), Gaps = 16/455 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF-C 60
           I++ ++ NG   +  LST LI  ++K  D   A +       R +++++A ISG ++  C
Sbjct: 19  IHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGC 78

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
                L   D LR  G + + FT+ S+++AC     LQ    + G   K  F+S + + S
Sbjct: 79  YQDALLVFLDMLR-AGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQS 137

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ ++K G++  A   F    + D V++ A++  Y   G    S  +F  M   G+  
Sbjct: 138 ALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSP 197

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+  +VL AS    DV    QIH   +++G+ S +   L+ ++++ Y +C     A  
Sbjct: 198 DLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHI--SLSGSLIDAYAKCESLASAHC 255

Query: 235 MFDEITEPDVVSWSERIAAACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++  +   D++S +  +           +A  LFK+++    +I++  + ++ +      
Sbjct: 256 LYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANIS 315

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+QI A   K      V++GNALI MY K G++ DA   F+ +  K+ +SW S+I 
Sbjct: 316 SLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLIT 375

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFL 409
           GY  +G  ++A+ +F  M    L PN  T  S+L A ++     +  +  +++I K   L
Sbjct: 376 GYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNIL 435

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEID-KKNA 443
                 SC++  + +   L E+  ++++++ K NA
Sbjct: 436 PRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNA 470



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 234/471 (49%), Gaps = 21/471 (4%)

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           +   ++H   L  GF+S ++L +  I  Y+K G+ VSA   F    +   V+++A + GY
Sbjct: 14  KPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGY 73

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGV 211
             NG +  +  VF++M   G + N+F+  +VL A   ++    G QI G   K  F S +
Sbjct: 74  SQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNL 133

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLR 268
              + +A+++L+ +CG+  DA  +F  + E DVVSW+  I A A  G   ++F +F+ + 
Sbjct: 134 I--VQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMM 191

Query: 269 FNDFQINEYTMINLLSSVG-GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                 + +T  ++L + G    ++R   QI     ++G+   +S+  +LI  Y KC  +
Sbjct: 192 QEGMSPDLFTFGSVLKASGMASDVIRVC-QIHQLIIQLGYGSHISLSGSLIDAYAKCESL 250

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYS-ENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
             A  ++  +  KD +S  +++ GY+ ++ + ++ALD+F  + +  +  +   + S+   
Sbjct: 251 ASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNI 310

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +N  SL    Q+H+  +K     D +M + LI  Y K   + ++ R  +E+++KN +  
Sbjct: 311 CANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISW 370

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCL- 503
            +L +         EA+ L++ +     + N  TF  +L AC    +T    G+   C  
Sbjct: 371 TSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLT----GEGWECFN 426

Query: 504 ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
            + ++Y+     E  S ++D++ + G +E+A     K+  + + + W A++
Sbjct: 427 NMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAIL 477



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 151/294 (51%), Gaps = 14/294 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI   L K+    + I+ + L+   +K      A       + RD++++NA+I   A   
Sbjct: 119 QIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQG 178

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLV 116
            SG + ++F  +  +G+ PD FTF S++KA G +  + I    +H + ++LG+ S + L 
Sbjct: 179 FSGDSFRMFRSMMQEGMSPDLFTFGSVLKASG-MASDVIRVCQIHQLIIQLGYGSHISLS 237

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLGL 175
              I+ YAK   + SA   ++     D ++ TA++ GY  +  +  K+ ++F E++ + +
Sbjct: 238 GSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHM 297

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           ++++  L ++     ++     G QIH   +K      V   + NA++++Y + G+  DA
Sbjct: 298 KIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVA--MGNALIDMYAKSGEIKDA 355

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
            + F+E+ E +V+SW+  I    +   G EA  LFK + +   + N+ T ++LL
Sbjct: 356 NRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLL 409



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 164/382 (42%), Gaps = 41/382 (10%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L+    +K+ K    +H+ I+ +GF  +  + + LI  Y K      +++V   + ++  
Sbjct: 4   LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           V  +A  S      C+ +AL ++  +  +  + N  T+  VL+AC  +  L++G  I   
Sbjct: 64  VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
             K+R+  ++ V+SA++D++ KCG +EDA   F  +    +  WNA++  YA  G   + 
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHA-------------------------GLVREA 598
             +F  M + G+ PD  T+ +VL +   A                         G + +A
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243

Query: 599 RTYLSCMSDLHGL---IPQLEHYACIVDLLGRVGLLEGAKMTID------QMPIPPDAHI 649
                 ++  H L   +P  +  +C   + G       +   +D      QM +  D  I
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVI 303

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNE-STYVLLSNLYASAGMWNDVGKLRKEMK 708
             S+ + C    ++ +G    +  L+ +P  + +    L ++YA +G   D  +   EM+
Sbjct: 304 LCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME 363

Query: 709 EKFLCKEPGYSWIH-VGGYTHH 729
           EK +      SW   + GY  H
Sbjct: 364 EKNVI-----SWTSLITGYGSH 380



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K     D  +   LI  + K  + + A R   + + +++I++ +LI+G     
Sbjct: 322 QIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHG 381

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A+ LF ++ Y+GL+P+  TF SL+ AC
Sbjct: 382 HGHEAIALFKKMEYEGLKPNDITFLSLLFAC 412


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 218/771 (28%), Positives = 367/771 (47%), Gaps = 108/771 (14%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGF 109
           N   S L+      P L    +  +  LRP       L+K+C +++E   +H        
Sbjct: 8   NIFFSSLSPSIHKPPTLN--PKTSHSVLRPHWII--DLLKSCSNIREFSPIHA------- 56

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY-------VWN----- 157
               +L++    N     EI S  + F   L ++N+     +  Y       +WN     
Sbjct: 57  ----HLITA---NLIHDPEITSQVLAF--LLSVNNLDCAHQILSYSHEPESIIWNTLLEN 107

Query: 158 ----GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG 210
               G   +  E +  M + G+ L+  +   ++ A   +FDVK G ++HG  +K GF  G
Sbjct: 108 KLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGF--G 165

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
               LNN +M LY +CG+  +  ++F+++T  DV+SW+  I+     G+  EA  LF ++
Sbjct: 166 RNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEM 225

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
             +    +E TM++L+S+    + L  GK++  +          S+ N L+ MY KCG++
Sbjct: 226 LVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKM 285

Query: 328 NDA---------------------------------RSIFDYLIFKDSVSWNSMIAGYSE 354
           ++A                                 R +FD +  +  VSW +M++GY +
Sbjct: 286 DEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQ 345

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            G++ ++L++F  M   ++IP+   + ++L A  + +       VH+ I+  G L+D  +
Sbjct: 346 GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFL 405

Query: 415 ISCLITTYGKCNALNESKRVLSE-------------------------------IDKKNA 443
            + L+  Y KC  L+E+ R   +                               I +K+ 
Sbjct: 406 GNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDI 465

Query: 444 VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           V  N + +  V      E+ E++  +  S  + + +T   +L +CA +  L  G  ++  
Sbjct: 466 VSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVY 525

Query: 504 ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
             K     D  + +A+IDMY KCG +E A   F +I   ++  W AMM  YA  G   E 
Sbjct: 526 IEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEA 585

Query: 564 SNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
            +L+ +M + GVKPD +T++A+L +C H GLV E   Y + +   + +IP + HY C+VD
Sbjct: 586 IDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVD 645

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           LLGRVG LE     I++MPI PD  IW SL+ AC  + N++L   A  +L+E+ P N   
Sbjct: 646 LLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGA 705

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +VLLSN+YA AG W+DV K+R ++ E  + K+PG++ I   G  H F A +
Sbjct: 706 HVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 190/414 (45%), Gaps = 58/414 (14%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLAR---FCQSGPALKL 68
           +D +L TTL+S + K     +A R LFD  N R ++++  ++SG  +   +C+S   L+L
Sbjct: 300 VDVVLWTTLVSGYVKSNKIDKA-RQLFDKMNERSLVSWTTMMSGYVQGGYYCES---LEL 355

Query: 69  FDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAK 125
           F ++R++ + PD     +++ AC  L++ ++   VH   +  G     +L +  ++ YAK
Sbjct: 356 FQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAK 415

Query: 126 SGEIVSAEMCF---------------------------RDCL----DLDNVAYTAMVCGY 154
            G++  A   F                           RD      + D V++  MV  Y
Sbjct: 416 CGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAY 475

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLS---GV 211
           V +  F++S E+F +M+S  ++ ++ +L ++L +    K G   HG  V V       G+
Sbjct: 476 VKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSC--AKVGALNHGIWVNVYIEKNEIGI 533

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLR 268
              L  A++++Y +CG    A ++F +I E +V  W+  +AA A +G  +EA  L+ ++ 
Sbjct: 534 DAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEME 593

Query: 269 FNDFQINEYTMINLLSSVGGERILRAG----KQIQAFCYKVGFMEVVSIGNALISMYGKC 324
               + +  T I LL++     ++  G     ++++F      +  +     ++ + G+ 
Sbjct: 594 ERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSF---YNIIPTIHHYGCMVDLLGRV 650

Query: 325 GQVNDARSIFDYLIFKDSVS-WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           G + +     + +  +  VS W+S++     +     A   F  ++E     NG
Sbjct: 651 GHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNG 704



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           KN   +D +L T LI  + K      A+        +++  + A+++  A   Q+  A+ 
Sbjct: 528 KNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAID 587

Query: 68  LFDRLRYQGLRPDAFTFSSLVKACG 92
           L+  +  +G++PD  TF +L+ AC 
Sbjct: 588 LYLEMEERGVKPDHVTFIALLAACS 612


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 216/771 (28%), Positives = 383/771 (49%), Gaps = 21/771 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+ L+++NG  +   L   L++ + K      A       Q++ ++ + +LI   AR  
Sbjct: 61  RIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSG 120

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLG-FSSRVYLVSGF 119
               A  LF  ++ QG+ P+  T+ +++ ACG   E + +       G     V + +  
Sbjct: 121 HPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTIRARVEACGSLELDVIVATAV 180

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y K G++ SA   F   L  D   + AM+   V + + D++ E+F +MR  G+  N+
Sbjct: 181 MNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNK 240

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHL-NNAIMNLYVRCGQKLDAVKM 235
            +  A L A   S D  E  +IH F  +   L+G  + +   A++N+Y + G+  DA ++
Sbjct: 241 GTCVAALNACCHSRDFSEALRIHAFARE---LAGDADTVVQTALVNMYGKFGKVDDAEEI 297

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+ I E DVVSW+  + A AC+G   +AF  F+++       +  T + +L++      L
Sbjct: 298 FERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHL 357

Query: 293 RAGKQIQAFCYKVGF-MEVVSI--GNALISMYGKCGQVNDARSIFDYLIFKDS-----VS 344
           + G  ++    + G  +E V +  G A+++MY +C     A S    L+ +D      + 
Sbjct: 358 KHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFS-SSLLLEQDRDQPSIMM 416

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN++++ Y EN  F +A  +F  ML   +  +  ++ ++  A  +S SL++   +HS + 
Sbjct: 417 WNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLT 476

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           +S       + + L+T Y +  +L +++ +   +  +N +   A+  V      + EAL 
Sbjct: 477 ESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALR 536

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           ++R+I       N  TF+ VL AC  +  +   K +     +  +  ++ V + ++    
Sbjct: 537 IFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLG 596

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG++E+    F+ +   +   WN  +   AQHG       LF  M   G+    +T + 
Sbjct: 597 KCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIG 656

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL+SC HAGLV +  +Y   M   +G   + EHY+C++DLL R G LE A+  + ++P  
Sbjct: 657 VLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFG 716

Query: 645 PDA-HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
             +   W +LL  C ++G+++ G  A  ++L L P +   Y+++ NLYA AG W +   +
Sbjct: 717 DQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAV 776

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           RK M E    KEPG SWI V G  H F  GD+SH +S EI++EL +L E M
Sbjct: 777 RKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEM 827



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 288/618 (46%), Gaps = 18/618 (2%)

Query: 59  FCQSGPALKLFDRLRY-QGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVY 114
           F  S P  +  D L+Y      DA TF++L+  C  L    +   +HG+ L+ G     +
Sbjct: 18  FSTSAPQHRT-DELKYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDF 76

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  +  Y K G    A   F+   D   VA+T+++     +G   ++  +F EM+  G
Sbjct: 77  LGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQG 136

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  N+ +  AVLGA     E + I       G L  +   +  A+MN Y +CG    A  
Sbjct: 137 VMPNDVTYVAVLGACGHPWEVDTIRARVEACGSLE-LDVIVATAVMNAYGKCGDLDSAWG 195

Query: 235 MFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD I   D   W+  I+   A   G EA  LF+ +R      N+ T +  L++    R 
Sbjct: 196 VFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRD 255

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
                +I AF  ++       +  AL++MYGK G+V+DA  IF+ +  +D VSWN+M+  
Sbjct: 256 FSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTA 315

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF--- 408
            + NGF ++A   F  ML    +P+  T  +IL A   +  LK    V +  ++ G    
Sbjct: 316 NACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIE 375

Query: 409 LLDDSMISCLITTYGKC----NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
            +D  M + ++  Y +C    +A + S  +  + D+ + +  N + S+ V      EA  
Sbjct: 376 SVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFT 435

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           ++R +      ++  +   V  AC +   LE+GK IH L  ++   +   V++A++ MY 
Sbjct: 436 IFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYA 495

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           + G++EDA+  F  +   ++  W AM+  ++Q G   E   +F  +   GV P+E+T+ A
Sbjct: 496 RLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTA 555

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL +C +   +  A+   +C+S+  G    +E    ++  LG+ G LE        M + 
Sbjct: 556 VLNACGNLASIPAAKLVQACLSET-GFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVK 614

Query: 645 PDAHIWQSLLSACTIYGN 662
                W + ++A   +GN
Sbjct: 615 NQVS-WNTAIAANAQHGN 631


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 296/549 (53%), Gaps = 36/549 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +FD I EP+++ W+      A + D V A  L+  +       N YT   LL +   
Sbjct: 56  AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  R G+QI     K+G    + +  +LI+MY K G+  DAR +FD             
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTAL 175

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN++I+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 176 IKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDE 235

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM ++L A + S S++   QVHS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 236 STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG 355

Query: 498 KAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           + IH    K          + +++IDMY KCG IE A++ F  +   SL+ WNAM+ G+A
Sbjct: 356 RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG  +   ++F++M K G++PD+IT++ +L++C H+G++   R     M++ + + P+L
Sbjct: 416 MHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKL 475

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC ++GN++LG      L++
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIK 535

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           ++P N  +YVLLSN+YA+AG WN+V K R  + +K + K PG S I +    H F  GD 
Sbjct: 536 IEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 595

Query: 736 SHSQSKEIY 744
            H +++EIY
Sbjct: 596 LHPRNREIY 604



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 233/492 (47%), Gaps = 64/492 (13%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  ++  +++S    F     A       Q  +++ +N +  G 
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEFSVLS--PHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       AL L+  +   GL P+++TF  L+KAC    + +E + +HG  LKLG    +
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138

Query: 114 Y----LVSGFIEN---------------------------YAKSGEIVSAEMCFRDCLDL 142
           Y    L++ +++N                           YA +G I SA+  F +    
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
           D V++ A++ GY   G + ++ E+F EM    ++ +E ++  VL A   S  ++ G Q+H
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF S +   + NA+++LY++CG+   A  +F+ ++  DV+SW+  I        
Sbjct: 259 SWIDDHGFGSNL--KIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNL 316

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +    NE TM+++L +      +  G+ I  +  K   G     S+ 
Sbjct: 317 YKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLR 376

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A+ +FD ++ +   SWN+MI G++ +G  N A D+F  M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-------CLITTYGKCNA 427
           P+  T   +L A S+S  L     +  HI +S  + +D  I+       C+I   G    
Sbjct: 437 PDDITFVGLLSACSHSGML----DLGRHIFRS--MTEDYKITPKLEHYGCMIDLLGHSGL 490

Query: 428 LNESKRVLSEID 439
             E++ +++ ++
Sbjct: 491 FKEAEEMINSME 502



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 213/460 (46%), Gaps = 50/460 (10%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
           SL+  C +LQ   I+H   +K G  +  Y +S  IE    S     +  A   F    + 
Sbjct: 7   SLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEP 66

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
           + + +  M  G+  + +   +  ++V M SLGL  N ++   +L A   S   +EG+QIH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIH 126

Query: 200 GFGVKVGFLSGVCN---HLNNAIMNLYVRCGQKLDA------------------------ 232
           G  +K+G     C+   +++ +++ +YV+ G+  DA                        
Sbjct: 127 GHVLKLG-----CDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYAS 181

Query: 233 -------VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
                   KMFDEI   DVVSW+  I+   +     EA  LFK++   + + +E TM+ +
Sbjct: 182 NGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTV 241

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           LS+      +  G+Q+ ++    GF   + I NALI +Y KCG+V  A  +F+ L +KD 
Sbjct: 242 LSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDV 301

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +SWN++I GY+    + +AL +F  ML     PN  TM SIL A ++  ++     +H +
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVY 361

Query: 403 IIK--SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           I K   G     S+ + LI  Y KC  +  +++V   +  ++    NA+           
Sbjct: 362 IDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRAN 421

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
            A +++  +     E +  TF  +L AC+    L+ G+ I
Sbjct: 422 PAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 162/360 (45%), Gaps = 19/360 (5%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H D +  T LI  +        A +   +   +D++++NALISG A       AL+LF  
Sbjct: 166 HRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKE 225

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +    ++PD  T  +++ AC    S++    VH      GF S + +V+  I+ Y K GE
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + +A   F      D +++  ++ GY     + ++  +F EM   G   NE ++ ++L A
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPA 345

Query: 189 -----SFDVKEGEQIHGFGVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITE 241
                + D+  G  IH +  K   L GV N   L  +++++Y +CG    A ++FD +  
Sbjct: 346 CAHLGAIDI--GRWIHVYIDKR--LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLN 401

Query: 242 PDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
             + SW+  I   A       AF +F  +R +  + ++ T + LLS+     +L  G+ I
Sbjct: 402 RSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461

Query: 299 -QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENG 356
            ++          +     +I + G  G   +A  + + + +  D V W S++     +G
Sbjct: 462 FRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 131/309 (42%), Gaps = 36/309 (11%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI---TTYGKCNALNESKRVLSEIDK 440
           L  + N K+L+    +H+ +IK+G    +  +S LI         + L  +  V   I +
Sbjct: 6   LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
            N +  N +      +S    AL LY  +       N  TF  +LKACA      +G+ I
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK---------------------- 538
           H   LK   D D++V +++I MY K G  EDA++ F +                      
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185

Query: 539 ---------ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                    I    +  WNA++ GYA+ G Y E   LF +M K  VKPDE T + VL++C
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             +  +   R   S + D HG    L+    ++DL  + G +E A    + +    D   
Sbjct: 246 AQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY-KDVIS 303

Query: 650 WQSLLSACT 658
           W +L+   T
Sbjct: 304 WNTLIGGYT 312



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 5/193 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +  +G   +  +   LI  + K  +   A         +D+I++N LI G     
Sbjct: 256 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMN 315

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL-----GFSSRVYL 115
               AL LF  +   G  P+  T  S++ AC  L   +I   + + +     G S+   L
Sbjct: 316 LYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSL 375

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ YAK G+I +A+  F   L+    ++ AM+ G+  +G  + + ++F  MR  G+
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGI 435

Query: 176 ELNEFSLTAVLGA 188
           E ++ +   +L A
Sbjct: 436 EPDDITFVGLLSA 448


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/549 (33%), Positives = 293/549 (53%), Gaps = 36/549 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F  I EP+ + W+  +   A + D V A  L+  +       N YT   LL S   
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +    G+QI     K+G+   + +  +LISMY + G++ DA  +FD             
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM ++L A + S+S++   QVHS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ V  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 498 KAIHCLALKARYD--QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           + IH    K   D      + +++IDMY KCG IE A + F  +   SL+ WNAM+ G+A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG  +   +LF++M K G++PD+IT++ +L++C H+G +   R     M+  + + P+L
Sbjct: 379 MHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKL 438

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY C++DLLG  GL + AK  I  MP+ PD  IW SLL AC  +GN++L       L++
Sbjct: 439 EHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMK 498

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           ++P+N  +YVLLSN+YA+AG W++V K+R  +  K + K PG S I +    H F  GD 
Sbjct: 499 VEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDK 558

Query: 736 SHSQSKEIY 744
            H +++EIY
Sbjct: 559 LHPRNREIY 567



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 227/510 (44%), Gaps = 77/510 (15%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSL 87
           F  F  A       Q  + + +N ++ G A       ALKL+  +   GL P+++TF  L
Sbjct: 13  FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72

Query: 88  VKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           +K+C    + +E + +HG  LKLG+   +Y+ +  I  YA++G +  A   F      D 
Sbjct: 73  LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132

Query: 145 VAYTAMVCGYV----------------------WN---------GEFDKSKEVFVEMRSL 173
           V+YTA++ GY                       WN         G + ++ E+F EM   
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192

Query: 174 GLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +  +E ++  VL A   S  V+ G Q+H +    GF S +   + NA+++LY +CGQ  
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNL--KIVNALIDLYSKCGQVE 250

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A  +F+ ++  DVVSW+  I          EA  LF+++  +    N+ T++++L +  
Sbjct: 251 TACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACA 310

Query: 288 GERILRAGKQIQAFCYK--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
               +  G+ I  +  K         S+  +LI MY KCG +  A  +F+ ++ K   SW
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N+MI G++ +G  N   D+F  M +  + P+  T   +L A S+S  L     +  HI K
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKL----DLGRHIFK 426

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           S  +  D  I+  +  YG                         +  +L ++    EA E+
Sbjct: 427 S--MTQDYDITPKLEHYG------------------------CMIDLLGHSGLFKEAKEM 460

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            +T+     E +G  +  +LKAC    +LE
Sbjct: 461 IKTM---PMEPDGVIWCSLLKACRRHGNLE 487



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 213/466 (45%), Gaps = 47/466 (10%)

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDV 192
           F    + + + +  M+ GY  + +   + +++V M SLGL  N ++   +L +   S   
Sbjct: 23  FATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAF 82

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLN-----------------------------NAIMNLY 223
           +EG+QIHG  +K+G+   +  H +                              A++  Y
Sbjct: 83  EEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGY 142

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
              G    A +MFDEI   DVVSW+  I+   +     EA  LFK++   + + +E TM+
Sbjct: 143 ASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMV 202

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            +LS+    R +  G+Q+ ++    GF   + I NALI +Y KCGQV  A  +F+ L  K
Sbjct: 203 TVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCK 262

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D VSWN++I GY+    + +AL +F  ML     PN  T+ SIL A ++  ++     +H
Sbjct: 263 DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIH 322

Query: 401 SHIIKSGFLLDD-----SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
            +I K    L D     S+ + LI  Y KC  +  + +V + +  K+    NA+      
Sbjct: 323 VYIDKK---LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 379

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                   +L+  +  +  E +  TF  +L AC+    L+ G+ I   ++   YD    +
Sbjct: 380 HGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIF-KSMTQDYDITPKL 438

Query: 516 E--SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           E    +ID+    G  ++AK   + +  +     W +++    +HG
Sbjct: 439 EHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 179/405 (44%), Gaps = 27/405 (6%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H D +  T LI+ +    + R A     +   +D++++NA+ISG A       AL+LF  
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +    +RPD  T  +++ AC   +  E+   VH      GF S + +V+  I+ Y+K G+
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + +A   F      D V++  ++ GY     + ++  +F EM   G   N+ ++ ++L A
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308

Query: 189 -----SFDVKEGEQIHGFGVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITE 241
                + D+  G  IH +  K   L  V N   L  +++++Y +CG    A ++F+ +  
Sbjct: 309 CAHLGAIDI--GRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH 364

Query: 242 PDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
             + SW+  I   A        F LF  +R N  + ++ T + LLS+      L  G+ I
Sbjct: 365 KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424

Query: 299 -QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
            ++          +     +I + G  G   +A+ +   +  + D V W S++     +G
Sbjct: 425 FKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484

Query: 357 FFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
               A     ++++        + L+ N Y  A   + V+  ++L
Sbjct: 485 NLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRAL 529


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 162/429 (37%), Positives = 262/429 (61%), Gaps = 1/429 (0%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N L++MY K   + DA  +FD +  ++++S+ ++I GY+E+  F +A+++F   L   ++
Sbjct: 77  NILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVR-LHREVL 135

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN +T AS+L+A +  + L    Q+H H+IK G   D  + + L+  Y KC  +  S  +
Sbjct: 136 PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMEL 195

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
            +E   +N V  N +    V      +AL L+  +     +    T+S  L+ACA++  L
Sbjct: 196 FAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 255

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           E G  IH L +K  +D+DI V +A+IDMY KCG+I+DA+  F  + +     WNAM+ GY
Sbjct: 256 EPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGY 315

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           + HG   E   +F+KM +  VKPD++T++ VL++C +AGL+ + + Y + M   HG+ P 
Sbjct: 316 SMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 375

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EHY C+V LLGR G L+ A   ID++P  P   +W++LL AC I+ +I+LG ++  ++L
Sbjct: 376 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVL 435

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           E++P +++T+VLLSN+YA+A  W++V  +RK MK K + KEPG SWI   G  H F  GD
Sbjct: 436 EMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGD 495

Query: 735 SSHSQSKEI 743
           +SH + + I
Sbjct: 496 TSHPEVRVI 504



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 180/354 (50%), Gaps = 10/354 (2%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   LK G    ++  +  +  Y KS  +  A   F +  + + +++  ++ GY  +  
Sbjct: 60  LHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
           F ++ E+FV +    L  N+F+  +VL A   ++    G QIH   +K+G  S V   ++
Sbjct: 120 FLEAIELFVRLHREVLP-NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV--FVS 176

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQ 273
           NA+M++Y +CG+  +++++F E    + V+W+  I       DG +A  LF ++     Q
Sbjct: 177 NALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQ 236

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             E T  + L +      L  G QI +   K  F + + + NALI MY KCG + DAR +
Sbjct: 237 ATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLV 296

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  +D VSWN+MI+GYS +G   +AL +F  M E  + P+  T   +L A +N+  L
Sbjct: 297 FDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLL 356

Query: 394 KQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            Q     + +I+  G        +C++   G+   L+++ +++ EI  + +V +
Sbjct: 357 DQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 410



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 179/358 (50%), Gaps = 16/358 (4%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGP 64
           ++K G  LD      L++ + K +DF      LFD    R+ I++  LI G A   +   
Sbjct: 64  ILKRGGCLDLFAWNILLNMYVK-SDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIE 121
           A++LF RL  + L P+ FTF+S+++AC +++   +   +H   +K+G  S V++ +  ++
Sbjct: 123 AIELFVRLHREVL-PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 181

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            YAK G + ++   F +    ++V +  ++ G+V  G+ +K+  +F+ M    ++  E +
Sbjct: 182 VYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
            ++ L A      ++ G QIH   VK  F   +   + NA++++Y +CG   DA  +FD 
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIV--VTNALIDMYAKCGSIKDARLVFDL 299

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + + D VSW+  I+       G EA  +F  ++  + + ++ T + +LS+     +L  G
Sbjct: 300 MNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQG 359

Query: 296 KQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMIAG 351
           +    +     G    +     ++ + G+ G ++ A  + D + F+ SV  W +++  
Sbjct: 360 QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 6/259 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK G H D  +S  L+  + K      +     ++ +R+ +T+N +I G  +  
Sbjct: 159 QIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLG 218

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL+LF  +    ++    T+SS ++AC SL   E    +H + +K  F   + + +
Sbjct: 219 DGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN 278

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  A + F      D V++ AM+ GY  +G   ++  +F +M+   ++ 
Sbjct: 279 ALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKP 338

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGV--CNHLNNAIMNLYVRCGQKLDAVKM 235
           ++ +   VL A  +    +Q   +   +    G+  C      ++ L  R G    AVK+
Sbjct: 339 DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL 398

Query: 236 FDEIT-EPDVVSWSERIAA 253
            DEI  +P V+ W   + A
Sbjct: 399 IDEIPFQPSVMVWRALLGA 417


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 215/692 (31%), Positives = 355/692 (51%), Gaps = 33/692 (4%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL-- 94
           LFD   +R    +N L+       +    L+L+ R+  +  +P A  F   + ACG +  
Sbjct: 107 LFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKD 166

Query: 95  --QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
             Q   I + V    G +S +   S  +  YA+ G I  A   F D  +L    + A++ 
Sbjct: 167 LAQGRSIHYRVATGRGINSSIQ--SALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMS 224

Query: 153 GYVWNGEFDKSKEVFVEM-------RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKV 205
                G   ++ E+F +M       RS  + L   +    L     + +  Q    G +V
Sbjct: 225 ALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRV 284

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFG-- 262
             L        NA++++YVRCG+  +A+++F ++   +VVSW+  IAA A  G  +F   
Sbjct: 285 LVL--------NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVK 336

Query: 263 LFKDLRFNDFQINEYTMINLLSSV---GGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           LF  +       NE T  +++S++   G + IL  G++I +     G      + N+LI+
Sbjct: 337 LFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLIN 396

Query: 320 MYGKCGQVNDARSIFDYLI--FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           MY + G + +AR +FD ++   K  VS+ +MI+ Y+ NG   QAL++F  M    + PN 
Sbjct: 397 MYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNE 456

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLS 436
            T A++L A      L     +H  +I+SG    D    + L+  Y KC  L  + RV  
Sbjct: 457 ITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFE 516

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  K+ V    + +  V +  +  AL+LY  +  S    + +T S +L ACA + DL  
Sbjct: 517 TMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAM 576

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS-LAGWNAMMMGYA 555
           G+ IH  AL+++ +QD   ++A+  MY KCG++E A R +R+ CR S +A W +M+  ++
Sbjct: 577 GEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRR-CRGSDVATWTSMLAAHS 635

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           Q G       L+ +M   GV+P+E+T++ VL SC  AGLV E R +   ++  +G  P  
Sbjct: 636 QQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSA 695

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EH+ C+VD+LGR G L  A+  +D MP  PD   WQSLLS+C ++ + ++G  A   LLE
Sbjct: 696 EHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLE 755

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           L P++ S +V LS +YA+AG  +D+ ++++E+
Sbjct: 756 LDPESTSQFVALSQIYAAAGRNSDIDEIKREL 787



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 205/453 (45%), Gaps = 16/453 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +    H    ++   LIS + +      A R   D  +R+++++ ++I+ +A+  
Sbjct: 270 QIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTG 329

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
               ++KLFD +  +G+ P+  T++S+V A   L  + I      +H      G  +   
Sbjct: 330 HYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPI 389

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDN--VAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           + +  I  YA+SG +  A   F   L+     V++T M+  Y  NG   ++ E+F EM +
Sbjct: 390 VQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTA 449

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  NE +   VL A     D+  G  IH   ++ G L        N+++++Y +CG  
Sbjct: 450 RGVAPNEITFATVLAACVAIGDLASGAWIHERMIESG-LDSSDPFAYNSLVDMYAKCGDL 508

Query: 230 LDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++F+ +   D+V+W+  IAA   + +   A  L+  +  +    +  T+  LL + 
Sbjct: 509 GFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVAC 568

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G++I     +    +     NAL +MY KCG +  A  ++      D  +W 
Sbjct: 569 ANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWT 628

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIK 405
           SM+A +S+ G  + AL+++  M    + PN  T   +L + S +  + +  +  HS    
Sbjct: 629 SMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSD 688

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            G         C++   G+   L +++ +L  +
Sbjct: 689 YGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSM 721



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 132/598 (22%), Positives = 253/598 (42%), Gaps = 52/598 (8%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +  G  ++  + + L++ + +      A     D +      +NA++S LA       A+
Sbjct: 177 VATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAI 236

Query: 67  KLFDRL-RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           +LF ++ ++Q              A G L+    +H         +RV +++  I  Y +
Sbjct: 237 ELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVR 296

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G++  A   F D    + V++T+M+      G +  S ++F  M + G+  NE +  +V
Sbjct: 297 CGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASV 356

Query: 186 ------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
                 LG    +  G +IH      G  +     + N+++N+Y R G   +A ++FD I
Sbjct: 357 VSAIAHLGRDAILDRGRKIHSQITASGIDADPI--VQNSLINMYARSGLLAEAREVFDSI 414

Query: 240 TE--PDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            E    VVS++  I+A A +G   +A  +F+++       NE T   +L++      L +
Sbjct: 415 LENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLAS 474

Query: 295 GKQIQAFCYKVGFMEVVSIG-NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
           G  I     + G         N+L+ MY KCG +  A  +F+ +  KD V+W ++IA   
Sbjct: 475 GAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANV 534

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           ++G    ALD++  ML+  + P+  T++++L A +N   L    ++H   ++S    D  
Sbjct: 535 QSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAH 594

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
             + L   Y KC +L ++ R+       +     ++ +        + ALELY  +    
Sbjct: 595 FQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEG 654

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIED 531
              N  TF  VL +C+    + +G+     ++ + Y      E    ++D+  + G + D
Sbjct: 655 VRPNEVTFIPVLISCSQAGLVAEGREFFH-SITSDYGSQPSAEHFGCMVDVLGRAGKLRD 713

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           A+                                L + M  +   PDEI + ++L+SC
Sbjct: 714 AE-------------------------------ELLDSMPFY---PDEIAWQSLLSSC 737



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 223/487 (45%), Gaps = 22/487 (4%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFND 271
           L   +  +Y RC     A+ +FD + +     W+   +   AA    +   L++ +   +
Sbjct: 87  LGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVEN 146

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV--SIGNALISMYGKCGQVND 329
            Q +    +  + + G  + L  G+ I    Y+V     +  SI +AL++MY +CG+++ 
Sbjct: 147 TQPSACGFMWAIVACGRIKDLAQGRSIH---YRVATGRGINSSIQSALVTMYAQCGRIDL 203

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A + FD      +  WN++++  +  G   +A+++F  M +     +  + A  L A + 
Sbjct: 204 AMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQC--SDRSCAIALGACAA 261

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           +  L+  +Q+H  I          +++ LI+ Y +C  L+E+ RV +++  +N V   ++
Sbjct: 262 AGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSM 321

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD---LEQGKAIHCLALK 506
            + +     ++ +++L+  +       N  T++ V+ A A +     L++G+ IH     
Sbjct: 322 IAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITA 381

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS--LAGWNAMMMGYAQHGCYHEVS 564
           +  D D  V++++I+MY + G + +A+  F  I  +S  +  +  M+  YA +G   +  
Sbjct: 382 SGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQAL 441

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM--SDLHGLIPQLEHYACIV 622
            +F +M+  GV P+EIT+  VL +C   G +         M  S L    P    Y  +V
Sbjct: 442 EIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFA--YNSLV 499

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
           D+  + G L  A    + M    D   W ++++A    GN    L    ++L+  + PD 
Sbjct: 500 DMYAKCGDLGFAARVFETMKT-KDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558

Query: 681 ESTYVLL 687
            +   LL
Sbjct: 559 ATLSTLL 565



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 197/474 (41%), Gaps = 47/474 (9%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           NLL   G +R L  G+++ A            +G  +  MY +C   + A ++FD +  +
Sbjct: 55  NLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDR 114

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
               WN ++  +         L+++  M   +  P+       + A    K L Q   +H
Sbjct: 115 RPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH 174

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + + +G  ++ S+ S L+T Y +C  ++ +     +  +      NA+ S L  A  H 
Sbjct: 175 -YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHR 233

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            A+EL+  +     + +  + +I L ACAA   L  G  IH       +   + V +A+I
Sbjct: 234 RAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALI 291

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY +CG +++A R F  +   ++  W +M+   AQ G Y     LF+ M   G+ P+E 
Sbjct: 292 SMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEK 351

Query: 581 TYLAVLTSCCHAG----LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           TY +V+++  H G    L R  + +    +      P +++   ++++  R GLL  A+ 
Sbjct: 352 TYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQN--SLINMYARSGLLAEARE 409

Query: 637 TIDQM----------------------P--------------IPPDAHIWQSLLSACTIY 660
             D +                      P              + P+   + ++L+AC   
Sbjct: 410 VFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAI 469

Query: 661 GNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           G++  G     +++E  L   +   Y  L ++YA  G      ++ + MK K L
Sbjct: 470 GDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDL 523



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 11/255 (4%)

Query: 2   IYSLLIKNG-HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           I+  +I++G    DP    +L+  + K  D   A R     + +D++ +  +I+   +  
Sbjct: 478 IHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSG 537

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +  AL L+DR+   G+ PD  T S+L+ AC   G L   E +H   L+       +  +
Sbjct: 538 NNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQN 597

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                YAK G +  A   +R C   D   +T+M+  +   G    + E++ EM S G+  
Sbjct: 598 ALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRP 657

Query: 178 NEFSLTAVL---GASFDVKEGEQ-IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           NE +   VL     +  V EG +  H      G       H    ++++  R G+  DA 
Sbjct: 658 NEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPS-AEHF-GCMVDVLGRAGKLRDAE 715

Query: 234 KMFDEIT-EPDVVSW 247
           ++ D +   PD ++W
Sbjct: 716 ELLDSMPFYPDEIAW 730



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A++L    N ++L    +VH+HI+      +  +   +   Y +C   + +  +   +  
Sbjct: 54  ANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPD 113

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +     N L    + A    + LELYR +     + +   F   + AC  + DL QG++I
Sbjct: 114 RRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSI 173

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H      R   +  ++SA++ MY +CG I+ A  AF        A WNA+M   A  G +
Sbjct: 174 HYRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHH 232

Query: 561 HEVSNLFNKMSK 572
                LF +M +
Sbjct: 233 RRAIELFFQMEQ 244


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 172/509 (33%), Positives = 268/509 (52%), Gaps = 32/509 (6%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  NL+      R L  GK++       GF+  + I N L+ MY KCG + DAR +FD +
Sbjct: 87  TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE-----FSLIPNGY----------TMAS 382
             +D  SWN M+ GY+E G   +A  +F  M E     ++ +  GY           + S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206

Query: 383 ILEAVSNS-----------------KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
           +++ V NS                 K +++  ++H HI+++G   D+ + S L+  YGKC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             ++E++ +  +I +K+ V   ++      +S   E   L+  + GSC   N  TF+ VL
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            ACA +T  E GK +H    +  +D   F  S+++DMY KCG IE AK       +  L 
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W +++ G AQ+G   E    F+ + K G KPD +T++ VL++C HAGLV +   +   +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           ++ H L    +HY C+VDLL R G  E  K  I +MP+ P   +W S+L  C+ YGNIDL
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
              A  +L +++P+N  TYV ++N+YA+AG W + GK+RK M+E  + K PG SW  +  
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             H F A D+SH    +I + L +L + M
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKM 595



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 209/438 (47%), Gaps = 27/438 (6%)

Query: 31  FRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL----KLFDRLRYQGLRPDAFTFSS 86
            R A + L   +     TY  LI    + C    AL    K+ + +R  G  P    ++ 
Sbjct: 70  LREAVQLLGRAKKPPASTYCNLI----QVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125

Query: 87  LVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           L++    CGSL +   V          S   +V+G    YA+ G +  A   F +  + D
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNG----YAEVGLLEEARKLFDEMTEKD 181

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFD---VKEGEQIH 199
           + ++TAMV GYV   + +++  ++  M R      N F+++  + A+     ++ G++IH
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACD 256
           G  V+ G  S     L +++M++Y +CG   +A  +FD+I E DVVSW+   +R   +  
Sbjct: 242 GHIVRAGLDSDEV--LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             E F LF +L  +  + NEYT   +L++         GKQ+  +  +VGF       ++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L+ MY KCG +  A+ + D     D VSW S+I G ++NG  ++AL  F  +L+    P+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS-MISCLITTYGKCNALNESKRVL 435
             T  ++L A +++  +++ ++    I +   L   S   +CL+    +     + K V+
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479

Query: 436 SEIDKKNAVHINALASVL 453
           SE+  K +  +   ASVL
Sbjct: 480 SEMPMKPSKFL--WASVL 495



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 107/455 (23%), Positives = 204/455 (44%), Gaps = 42/455 (9%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +L  V   +  ++EG+++H      GF+ G+   + N ++ +Y +CG  +DA K+FDE+ 
Sbjct: 90  NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV--IWNRLLRMYAKCGSLVDARKVFDEMP 147

Query: 241 EPDVVSWSERIAAACD-GV--EAFGLFKDL------------------------------ 267
             D+ SW+  +    + G+  EA  LF ++                              
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207

Query: 268 --RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
             R  + + N +T+   +++    + +R GK+I     + G      + ++L+ MYGKCG
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            +++AR+IFD ++ KD VSW SMI  Y ++  + +   +F  ++     PN YT A +L 
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A ++  + +   QVH ++ + GF       S L+  Y KC  +  +K V+    K + V 
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVS 387

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLA 504
             +L           EAL+ +  +  S  + +  TF  VL AC     +E+G +  + + 
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 447

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEV 563
            K R        + ++D+  + G  E  K    ++  + S   W +++ G + +G     
Sbjct: 448 EKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507

Query: 564 SNLFNKMSKFGVKPD-EITYLAVLTSCCHAGLVRE 597
                ++  F ++P+  +TY+ +      AG   E
Sbjct: 508 EEAAQEL--FKIEPENPVTYVTMANIYAAAGKWEE 540



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 167/374 (44%), Gaps = 45/374 (12%)

Query: 358 FNQALDMFC---------HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           F +A+D+ C          +L  +  P   T  ++++  S +++L++  +VH HI  SGF
Sbjct: 57  FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116

Query: 409 LLDDSMISCLITTYGKCNA-------------------------------LNESKRVLSE 437
           +    + + L+  Y KC +                               L E++++  E
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTDLEQ 496
           + +K++    A+ +  V      EAL LY  +        N  T SI + A AA+  + +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           GK IH   ++A  D D  + S+++DMY KCG I++A+  F KI    +  W +M+  Y +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
              + E  +LF+++     +P+E T+  VL +C         +     M+ + G  P   
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSF 355

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE- 675
             + +VD+  + G +E AK  +D  P  PD   W SL+  C   G  D  L     LL+ 
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414

Query: 676 -LQPDNESTYVLLS 688
             +PD+ +   +LS
Sbjct: 415 GTKPDHVTFVNVLS 428



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 170/371 (45%), Gaps = 27/371 (7%)

Query: 36  RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRL-RYQGLRPDAFTFS---SLVKA 90
           R LFD    +D  ++ A+++G  +  Q   AL L+  + R    RP+ FT S   +   A
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAA 230

Query: 91  CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
              ++  + +HG  ++ G  S   L S  ++ Y K G I  A   F   ++ D V++T+M
Sbjct: 231 VKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSM 290

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF 207
           +  Y  +  + +   +F E+       NE++   VL A  D+     G+Q+HG+  +VGF
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF 264
                +  +++++++Y +CG    A  + D   +PD+VSW+  I   A +G   EA   F
Sbjct: 351 --DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF 408

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN----ALISM 320
             L  +  + +  T +N+LS+     ++  G +   F Y +     +S  +     L+ +
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE---FFYSITEKHRLSHTSDHYTCLVDL 465

Query: 321 YGKCGQVNDARSIFDYLIFKDS-VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG-- 377
             + G+    +S+   +  K S   W S++ G S  G  + A +    +  F + P    
Sbjct: 466 LARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL--FKIEPENPV 523

Query: 378 --YTMASILEA 386
              TMA+I  A
Sbjct: 524 TYVTMANIYAA 534



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 5/192 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I+  +++ G   D +L ++L+  + K      A R +FD    +D++++ ++I    + 
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEA-RNIFDKIVEKDVVSWTSMIDRYFKS 297

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +      LF  L     RP+ +TF+ ++ AC  L   E+   VHG   ++GF    +  
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ Y K G I SA+     C   D V++T+++ G   NG+ D++ + F  +   G +
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417

Query: 177 LNEFSLTAVLGA 188
            +  +   VL A
Sbjct: 418 PDHVTFVNVLSA 429



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 46/91 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + + G       S++L+  +TK  +   A   +      D++++ +LI G A+  
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           Q   ALK FD L   G +PD  TF +++ AC
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430


>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 591

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 176/469 (37%), Positives = 269/469 (57%), Gaps = 2/469 (0%)

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFD 335
           +T+  +L ++   + +R G+QI A   K G +   V + N L+ +Y  CG ++D + +FD
Sbjct: 111 FTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFD 170

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
               +D VSW ++I  +++ G +++A++ F  M +  L  +G T+  +L A SN   L  
Sbjct: 171 ECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNL 230

Query: 396 AMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             +VHS+I     +  D  + + L+  Y KC+ LN + +V  E+  KN V  NA+ S L 
Sbjct: 231 GQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLA 290

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
           Y   + EAL+ +R +     + +  T   VL +CA +  LE GK +H    +     D F
Sbjct: 291 YQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKF 350

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++DMY KCG+I++A R F  + R  +  + AM+ G A HG  +    +F++M + G
Sbjct: 351 VGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVG 410

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++P+E+T+L +L +C H GLV E + Y   MSD + L PQ EHY C++DLLGR GL++ A
Sbjct: 411 IEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEA 470

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
           +  I +M I PD     +LL AC I+GN+D+G     KL EL PD E TY+L++NLY+S 
Sbjct: 471 EEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSV 530

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
             W D  K+RK MK K + K PG S I V G  H F  GD SH +SK I
Sbjct: 531 HRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVI 579



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 243/519 (46%), Gaps = 34/519 (6%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI----------ENYAKSGEIVSAE 133
           FS  + +C S+   + +HGV +K    S   L+   I          + +     +++  
Sbjct: 9   FSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHS 68

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF--- 190
              + CL L N    A++     N       E   EM  +GLE + F++  VL A     
Sbjct: 69  HDAQFCLSLCN----AIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQ 124

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            ++EG+QIH   +K G + G   +++N +M LY  CG   D  K+FDE    D+VSW+  
Sbjct: 125 GIREGQQIHARSIKTGMV-GFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTL 183

Query: 251 IAAACD------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC-Y 303
           I A          VEAF    DLR    + +  T++ +LS+      L  G+++ ++  +
Sbjct: 184 IQAFTKAGLYSRAVEAFMEMCDLR---LRADGRTLVVVLSACSNLGDLNLGQKVHSYIRH 240

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
            +     V +GNAL+ MY KC  +N A  +FD +  K+ V+WN+MI+G +  G + +ALD
Sbjct: 241 YIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALD 300

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            F  M +  + P+  T+  +L + +N   L+    VH+++ ++  L D  + + L+  Y 
Sbjct: 301 TFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYA 360

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC +++E+ RV   + +++     A+   L        A +++  ++    E N  TF  
Sbjct: 361 KCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLG 420

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI-C 540
           +L AC+    + +GK  +   +  +Y      E    +ID+  + G +++A+    K+  
Sbjct: 421 LLMACSHGGLVAEGKK-YFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 479

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           R  +    A++     HG      ++  K+++  + PDE
Sbjct: 480 RPDVFACGALLGACRIHGNVDIGESVMQKLTE--LDPDE 516



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 197/411 (47%), Gaps = 22/411 (5%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLK 106
           NA+I  ++R   +   ++  + +   GL PD FT   ++KA   +Q   E + +H   +K
Sbjct: 79  NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138

Query: 107 LGFSS-RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
            G     VY+ +  +  Y+  G I   +  F +C   D V++T ++  +   G + ++ E
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198

Query: 166 VFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGF-----GVKVGFLSGVCNHLNN 217
            F+EM  L L  +  +L  VL A     D+  G+++H +      +K     G      N
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVG------N 252

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQI 274
           A++++Y++C     A K+FDE+   +VV+W+  I+  A  G   EA   F+ ++    + 
Sbjct: 253 ALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKP 312

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +E T++ +L+S     +L  GK + A+  +   +    +GNAL+ MY KCG +++A  +F
Sbjct: 313 DEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVF 372

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           + +  +D  S+ +MI G + +G  N A  +F  M    + PN  T   +L A S+   + 
Sbjct: 373 ESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVA 432

Query: 395 QAMQVHSHII-KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +  +    +  K           C+I   G+   + E++ ++ +++ +  V
Sbjct: 433 EGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDV 483



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 3/178 (1%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +   L+  + K  D   A++   +   ++++T+NA+ISGLA   +   AL  F  ++
Sbjct: 247 DVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQ 306

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G++PD  T   ++ +C +L   EI   VH    +    +  ++ +  ++ YAK G I 
Sbjct: 307 DKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSID 366

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
            A   F      D  +YTAM+ G   +GE + + +VF EM  +G+E NE +   +L A
Sbjct: 367 EAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMA 424



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 118/262 (45%), Gaps = 12/262 (4%)

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+   +   S +   +E    +     E +G T  +VLKA A +  + +G+ IH  ++K
Sbjct: 79  NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138

Query: 507 -ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
                 +++V + ++ +Y  CG+I D ++ F +     L  W  ++  + + G Y     
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAG---LVREARTYLSCMSDLHGLIPQLEHYACIV 622
            F +M    ++ D  T + VL++C + G   L ++  +Y+    D+      +     ++
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKA---DVFVGNALL 255

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
           D+  +   L  A    D+MP+  +   W +++S     G     L     + +  ++PD 
Sbjct: 256 DMYLKCDDLNSAYKVFDEMPV-KNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPD- 313

Query: 681 ESTYVLLSNLYASAGMWNDVGK 702
           E T V + N  A+ G+  ++GK
Sbjct: 314 EVTLVGVLNSCANLGVL-EIGK 334



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ + +N    D  +   L+  + K      AFR     + RD+ +Y A+I GLA   +
Sbjct: 336 VHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGE 395

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +  A ++F  +   G+ P+  TF  L+ AC
Sbjct: 396 ANWAFQVFSEMFRVGIEPNEVTFLGLLMAC 425


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 187/580 (32%), Positives = 305/580 (52%), Gaps = 7/580 (1%)

Query: 174 GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           G + + F  +++L  S   +   QIH   V  G +      L    +N     G+   A 
Sbjct: 67  GFDFDSF-FSSLLDHSVHKRHLNQIHAQLVVSGLVES--GFLVTKFVNASWNIGEIGYAR 123

Query: 234 KMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FDE  EP V  W+  I          +A  ++  ++ +    + +T+  +L +  G  
Sbjct: 124 KVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVP 183

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +L  GK++    +++GF   V + N L+++Y KCG+V  AR +F+ L  ++ VSW SMI+
Sbjct: 184 VLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMIS 243

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY +NG   +AL +F  M + ++ P+   + S+L A ++ + L+Q   +H  ++K G   
Sbjct: 244 GYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEF 303

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  ++  L   Y KC  +  ++    +++  N +  NA+ S         EA+ L++ + 
Sbjct: 304 EPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMI 363

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 +  T    + ACA +  L+  K +     K  Y  D+FV +A+IDM+ KCG+++
Sbjct: 364 SKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVD 423

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A+  F +     +  W+AM++GY  HG   +  +LF  M + GV P+++T++ +LT+C 
Sbjct: 424 LAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACN 483

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+GLV E       M   +G+  + +HYAC+VDLLGR G L  A   I  MPI P   +W
Sbjct: 484 HSGLVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVW 542

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL AC IY ++ LG  A  +L  L P N   YV LSNLYAS+ +W+ V K+R  M+EK
Sbjct: 543 GALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREK 602

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            L K+ GYS I + G    F  GD SH + KEI++EL  L
Sbjct: 603 GLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESL 642



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 229/455 (50%), Gaps = 11/455 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ L+ +G      L T  ++      +   A +   +     +  +NA+I G +   
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
             G A++++ R++  G+ PD FT   ++KAC  +   E+   VHG   +LGF S V++ +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  YAK G +  A + F    D + V++T+M+ GY  NG   ++  +F +MR   ++ 
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 178 NEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L +VL A  DV++ EQ   IHG  VK+G        L  ++  +Y +CGQ + A  
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGL--EFEPDLLISLTAMYAKCGQVMVARS 326

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            FD++  P+V+ W+  I+  A +G   EA GLF+++   + + +  T+ + + +      
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGS 386

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   K +  +  K  +   V +  ALI M+ KCG V+ AR +FD  + KD V W++MI G
Sbjct: 387 LDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVG 446

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G    A+D+F  M +  + PN  T   +L A ++S  +++  ++   +   G    
Sbjct: 447 YGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEAR 506

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
               +C++   G+   LNE+   ++ +  +  V +
Sbjct: 507 HQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSV 541


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 170/456 (37%), Positives = 265/456 (58%), Gaps = 2/456 (0%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R L+ G+ I A      F + + + N +++MY KCG + +A+ +FD +  KD VSW  +I
Sbjct: 119 RKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLI 178

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GYS++G  ++AL +F  ML     PN +T++S+L+A     S     Q+H+  +K G+ 
Sbjct: 179 SGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           ++  + S L+  Y +   + E+K + + +  KN V  NAL +           + L+  +
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM 298

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                E    T+S VL ACA+   LEQGK +H   +K+      ++ + +IDMY K G+I
Sbjct: 299 LRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 357

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           +DAK+ FR++ +  +  WN+++ GYAQHG   E   LF +M K  V+P+EIT+L+VLT+C
Sbjct: 358 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 417

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E + Y   M   H +  Q+ H+  +VDLLGR G L  A   I++MPI P A +
Sbjct: 418 SHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 476

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC ++ N+DLG+ A  ++ EL P +   +VLLSN+YASAG  +D  K+RK MKE
Sbjct: 477 WGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 536

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
             + KEP  SW+ +    H F A D SH   +EI +
Sbjct: 537 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQR 572



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +K+G  IH       F   +   L N I+N+Y +CG   +A  +FD++   D+VSW+  I
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLV--LLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLI 178

Query: 252 AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +    +    EA  LF  +    FQ NE+T+ +LL + G       G+Q+ AF  K G+ 
Sbjct: 179 SGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +G++L+ MY +   + +A+ IF+ L  K+ VSWN++IAG++  G     + +F  M
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM 298

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L     P  +T +S+L A ++S SL+Q   VH+H+IKSG      + + LI  Y K  ++
Sbjct: 299 LRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 357

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++K+V   + K++ V  N++ S        AEAL+L+  +  +  + N  TF  VL AC
Sbjct: 358 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 417

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGW 547
           +    L++G+    L  K + +  +     V+D+  + G + +A +   ++  + + A W
Sbjct: 418 SHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVW 477

Query: 548 NAMM 551
            A++
Sbjct: 478 GALL 481



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 188/385 (48%), Gaps = 12/385 (3%)

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           L + D +    L P+   +S ++  C     L++   +H       F   + L++  +  
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAK G +  A+  F      D V++T ++ GY  +G+  ++  +F +M  LG + NEF+L
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 183 TAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
           +++L AS        G Q+H F +K G+   V  H+ ++++++Y R     +A  +F+ +
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNV--HVGSSLLDMYARWAHMREAKVIFNSL 267

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              +VVSW+  IA      +G     LF  +    F+   +T  ++L+       L  GK
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGS-LEQGK 326

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            + A   K G   +  IGN LI MY K G + DA+ +F  L+ +D VSWNS+I+GY+++G
Sbjct: 327 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 386

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +AL +F  ML+  + PN  T  S+L A S+S  L +       + K       +   
Sbjct: 387 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHV 446

Query: 417 CLITTYGKCNALNESKRVLSEIDKK 441
            ++   G+   LNE+ + + E+  K
Sbjct: 447 TVVDLLGRAGRLNEANKFIEEMPIK 471



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +L   +++ + K      A         +D++++  LISG ++  Q+  AL LF ++ 
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           + G +P+ FT SSL+KA G   S      +H   LK G+   V++ S  ++ YA+   + 
Sbjct: 199 HLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMR 258

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL--GA 188
            A++ F      + V++ A++ G+   GE +    +F +M   G E   F+ ++VL   +
Sbjct: 259 EAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACAS 318

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           S  +++G+ +H   +K G       ++ N ++++Y + G   DA K+F  + + D+VSW+
Sbjct: 319 SGSLEQGKWVHAHVIKSG--GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 376

Query: 249 ERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I+       G EA  LF+ +     Q NE T +++L++     +L  G+       K 
Sbjct: 377 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 436

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
                V+    ++ + G+ G++N+A    + +  K + + W +++  
Sbjct: 437 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGA 483



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 160/330 (48%), Gaps = 6/330 (1%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           SL P     + +L   +  + LKQ   +H+HI  S F  D  +++ ++  Y KC +L E+
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEA 159

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           + +  ++  K+ V    L S    +   +EAL L+  +     + N  T S +LKA    
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
                G+ +H  +LK  YD ++ V S+++DMY +   + +AK  F  +   ++  WNA++
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G+A+ G    V  LF +M + G +P   TY +VL +C  +G + + + ++       G 
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGK-WVHAHVIKSGG 337

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P       ++D+  + G ++ AK    ++ +  D   W S++S    +G     L    
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFE 396

Query: 672 KLL--ELQPDNESTYVLLSNLYASAGMWND 699
           ++L  ++QP NE T++ +    + +G+ ++
Sbjct: 397 QMLKAKVQP-NEITFLSVLTACSHSGLLDE 425



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 137/260 (52%), Gaps = 10/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K G+ ++  + ++L+  + ++A  R A         ++++++NALI+G AR  
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 286

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +    ++LF ++  QG  P  FT+SS++ AC   GSL++ + VH   +K G     Y+ +
Sbjct: 287 EGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 345

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAKSG I  A+  FR  +  D V++ +++ GY  +G   ++ ++F +M    ++ 
Sbjct: 346 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 405

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE +  +VL A   S  + EG+       K    + V +H+   +++L  R G+  +A K
Sbjct: 406 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVT--VVDLLGRAGRLNEANK 463

Query: 235 MFDEIT-EPDVVSWSERIAA 253
             +E+  +P    W   + A
Sbjct: 464 FIEEMPIKPTAAVWGALLGA 483



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 9/276 (3%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E   + +S +L  C  +  L+QG+AIH     + ++ D+ + + +++MY KCG++E+A+ 
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F K+    +  W  ++ GY+Q G   E   LF KM   G +P+E T L+ L      G 
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFT-LSSLLKASGTGP 220

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
                  L   S  +G    +   + ++D+  R   +  AK+  + +    +   W +L+
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALI 279

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK-EMKEKFLC 713
           +     G  +  +    ++L  +   E T+   S++ A A      G L + +     + 
Sbjct: 280 AGHARKGEGEHVMRLFXQML--RQGFEPTHFTYSSVLACA----SSGSLEQGKWVHAHVI 333

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           K  G    ++G      YA   S   +K++++ L+K
Sbjct: 334 KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVK 369


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 201/638 (31%), Positives = 338/638 (52%), Gaps = 9/638 (1%)

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           GE   A   F    + D  ++  MV GY  +G  D++ +++  M   G+  + ++   VL
Sbjct: 137 GETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVL 196

Query: 187 ---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
              G   D + G ++H   ++ GF   V   + NA+M +Y +CG  + A K+FD +T  D
Sbjct: 197 RSCGGVPDWRMGREVHAHVLRFGFGEEV--DVLNALMTMYAKCGDVMAARKVFDSMTVMD 254

Query: 244 VVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
            +SW+  IA   +  E      LF  +  ++ Q N  T+ ++  + G    +   K++  
Sbjct: 255 CISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHG 314

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              K GF   V+  N+LI MY   G +  AR++F  +  +D+++W +MI+GY +NGF ++
Sbjct: 315 LAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK 374

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           AL+++  M   ++ P+  T+AS L A +   SL   +++H      GF+    + + ++ 
Sbjct: 375 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILE 434

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y K   ++++  V   + +K+ V  +++ +   +   + EAL  +R +    +  N  T
Sbjct: 435 MYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKP-NSVT 493

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F   L ACAA   L  GK IH   L+   + + ++ +A+ID+Y KCG    A   F    
Sbjct: 494 FIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHG 553

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
              +  WN M+ G+  HG      + FN+M K G  PDE+T++A+L +C   G+V E   
Sbjct: 554 AKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWE 613

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
               M++ + ++P L+HYAC+VDLL R G L  A   I++MPI PDA +W +LL+ C I+
Sbjct: 614 LFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 673

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
            +++LG LA   +L L+P++   +VLL +LYA A +W+ + ++RK M+EK L  + G SW
Sbjct: 674 RHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSW 733

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           + V G  H F   D SH Q +EI   L  +YE M A+ 
Sbjct: 734 VEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG 771



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/629 (23%), Positives = 283/629 (44%), Gaps = 54/629 (8%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   ++S   +F +   A+R       RD+ ++N ++ G  +      AL L+ R+ + G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +RPD +TF  ++++CG + +  +   VH   L+ GF   V +++  +  YAK G++++A 
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---F 190
             F     +D +++ AM+ G+  NGE +   E+F+ M    ++ N  ++T+V  AS    
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           DV   +++HG  VK GF   V     N+++ +Y   G    A  +F  +   D ++W+  
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVA--FCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362

Query: 251 IAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G   +A  ++  +  N+   ++ T+ + L++      L  G ++       GF
Sbjct: 363 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 422

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  + + NA++ MY K  +++ A  +F  +  KD VSW+SMIAG+  N    +AL  F H
Sbjct: 423 ISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRH 482

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN  T  + L A + + +L+   ++H+H+++ G   +  + + LI  Y KC  
Sbjct: 483 MLA-DVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQ 541

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
              +         K+ V  N + +  V       AL  +  +       +  TF  +L A
Sbjct: 542 TGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCA 601

Query: 488 CAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           C+    + +G +  H +  K     ++   + ++D+  + G + +A              
Sbjct: 602 CSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEA-------------- 647

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVREARTYLS 603
                               +N +++  + PD   + A+L  C    H  L   A  Y+ 
Sbjct: 648 --------------------YNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVL 687

Query: 604 CM----SDLHGLIPQLEHYACIVDLLGRV 628
            +    +  H L+  L   AC+ D L RV
Sbjct: 688 ALEPNDAGYHVLLCDLYADACLWDKLARV 716



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 217/451 (48%), Gaps = 19/451 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           ++++ +++ G   +  +   L++ + K  D   A R +FD+    D I++NA+I+G    
Sbjct: 210 EVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA-RKVFDSMTVMDCISWNAMIAGHFEN 268

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            +    L+LF  + +  ++P+  T +S+  A G L +    + +HG+ +K GF+  V   
Sbjct: 269 GECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFC 328

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ YA  G +  A   F      D + +TAM+ GY  NG  DK+ EV+  M    + 
Sbjct: 329 NSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVS 388

Query: 177 LNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            ++ ++           S DV  G ++H      GF+S +   + NAI+ +Y +  +   
Sbjct: 389 PDDITIASALAACACLGSLDV--GVKLHELAESKGFISYIV--VTNAILEMYAKSKRIDK 444

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+++F  + E DVVSWS  IA  C      EA   F+ +   D + N  T I  L++   
Sbjct: 445 AIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAA 503

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              LR+GK+I A   + G      + NALI +Y KCGQ   A + F     KD VSWN M
Sbjct: 504 TGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIM 563

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSG 407
           IAG+  +G  + AL  F  M++    P+  T  ++L A S    + +  ++ HS   K  
Sbjct: 564 IAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYS 623

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            + +    +C++    +   L E+   ++E+
Sbjct: 624 IVPNLKHYACMVDLLSRAGQLTEAYNFINEM 654



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 160/364 (43%), Gaps = 18/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++ L +K G   D     +LI  +      R+A         RD +T+ A+ISG  +  
Sbjct: 311 EMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNG 370

Query: 61  QSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL+++  +    + PD  T     +     GSL     +H +    GF S + + +
Sbjct: 371 FPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTN 430

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +E YAKS  I  A   F+   + D V++++M+ G+ +N    ++ E     R +  ++
Sbjct: 431 AILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFN---HRNFEALYYFRHMLADV 487

Query: 178 NEFSLTAV-----LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
              S+T +       A+  ++ G++IH   ++ G       +L NA+++LYV+CGQ   A
Sbjct: 488 KPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYE--GYLPNALIDLYVKCGQTGYA 545

Query: 233 VKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F      DVVSW+  IA   A   G  A   F  +       +E T + LL +    
Sbjct: 546 WAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRG 605

Query: 290 RILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNS 347
            ++  G ++  +   K   +  +     ++ +  + GQ+ +A +  + + I  D+  W +
Sbjct: 606 GMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGA 665

Query: 348 MIAG 351
           ++ G
Sbjct: 666 LLNG 669


>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
 gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
          Length = 770

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 210/684 (30%), Positives = 348/684 (50%), Gaps = 34/684 (4%)

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D FT ++ +KAC G       +HG  +   F +   + +  +  Y KSG+   A   F +
Sbjct: 65  DEFTVANALKACRGYPLLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFEN 124

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGLELNEFSLTAVLGASFDVKE- 194
               D V++  ++ G         S++ F    +M S G+  +  + T VL   +   E 
Sbjct: 125 LTHPDIVSWNTVLSGC------QTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEA 178

Query: 195 ----GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
               G Q+H   VK GF   V   + NA++++Y R G  ++A ++F+E+   D+VSW+  
Sbjct: 179 YFLIGLQLHSCIVKFGFDCEV--FVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAM 236

Query: 251 IAAACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           I+        G+EA  +F  +     +++  +  + +S+ G E+ L   +QI     K  
Sbjct: 237 ISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTR 296

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
             + V++ N LIS Y KC  + DAR +F  +  ++ VSW +MI+         +A+  F 
Sbjct: 297 HEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEA-----EAVSFFN 351

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M    + PN  T   ++ A++  + + Q   VH    K+GF    ++ + +IT Y K  
Sbjct: 352 EMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFK 411

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           ++ +S +V  E+  ++ +  NAL S  V+     EA+  + +     +  N  +F  +L 
Sbjct: 412 SMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKP-NQYSFGSILN 470

Query: 487 ACAAMTD--LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           A  A  D  L+ G+  H   +K   + D  V SA++DMY K G+I ++++ F +  + S 
Sbjct: 471 AIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQ 530

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             W  ++  YA+HG Y  V N F +M +  V+PD IT+L++LT+C   G+V         
Sbjct: 531 FAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGS 590

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           M   + + P  EHY+C+VD+LGR G LE A+  +  +P  P   + QSLL AC ++GN+D
Sbjct: 591 MVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVD 650

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           +G      L+E++P    +YVL+SNLYA  G W  V K+RK M+ K + KE G+SW+ VG
Sbjct: 651 MGERVADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWVDVG 710

Query: 725 GYT-----HHFYAGDSSHSQSKEI 743
           G       H F +GD+SH QS+ I
Sbjct: 711 GIDSSLSLHGFSSGDTSHPQSEAI 734



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 261/538 (48%), Gaps = 24/538 (4%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ-SGPALKLFDRLRY 74
           I+S +L++ + K   F +A     +  + DI+++N ++SG    CQ S  A     ++  
Sbjct: 100 IVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSG----CQTSEDAFSFACKMNS 155

Query: 75  QGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
            G+  DA T+++++  C    E        +H   +K GF   V++ +  I  Y++ G +
Sbjct: 156 SGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHL 215

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRSLGLELNEFSLTAVL-- 186
           V A   F +    D V++ AM+ GY   G +  ++  +F++M   G+EL+  S T+ +  
Sbjct: 216 VEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSA 275

Query: 187 -GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
            G   +++   QIHG  +K      V   ++N +++ Y +C    DA  +F  + E +VV
Sbjct: 276 CGYEKNLELARQIHGLSIKTRHEKHVA--VSNVLISTYFKCQVIEDARLVFQNMNERNVV 333

Query: 246 SWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
           SW+  I+   D  EA   F ++R +    N+ T + L+ ++    ++  GK +  FC K 
Sbjct: 334 SWTTMISI--DEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKT 391

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           GF    ++ N++I+MY K   + D+  +F  L ++D ++WN++I+G+  NG   +A+  F
Sbjct: 392 GFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAF 451

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
              L  S  PN Y+  SIL A+  ++  SLK   + HS IIK G   D  + S L+  Y 
Sbjct: 452 FSGLIESK-PNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYA 510

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           K  ++ ES++V  E  +++      + S       +   +  +  +       +  TF  
Sbjct: 511 KRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLS 570

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI 539
           +L AC     ++ G  +    +K  Y  +   E  S ++DM  + G +E+A+R    I
Sbjct: 571 ILTACGRRGMVDMGCHLFGSMVK-DYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHI 627



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 228/464 (49%), Gaps = 47/464 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S ++K G   +  +   LIS ++++     A R   + + RD++++NA+ISG   + 
Sbjct: 185 QLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISG---YS 241

Query: 61  QSG----PALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           Q G     A+ +F ++   G+  D  +F+S V ACG   +L+    +HG+ +K      V
Sbjct: 242 QEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHV 301

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV--FVEMR 171
            + +  I  Y K   I  A + F++  + + V++T M+         D+++ V  F EMR
Sbjct: 302 AVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMI-------SIDEAEAVSFFNEMR 354

Query: 172 SLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGF--LSGVCNHLNNAIMNLYVRC 226
             G+  N+ +   ++ A      V +G+ +HGF  K GF   S VC    N+I+ +Y + 
Sbjct: 355 LDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVC----NSIITMYAKF 410

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAF--GLFKDLRFNDFQINEYT 278
               D+VK+F E+   D+++W+  I+         + + AF  GL +       + N+Y+
Sbjct: 411 KSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES------KPNQYS 464

Query: 279 MINLLSSVGG--ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
             ++L+++G   +  L+ G++  +   K+G      + +AL+ MY K G + +++ +F  
Sbjct: 465 FGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVE 524

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
              +   +W ++I+ Y+ +G +   ++ F  M    + P+  T  SIL A      +   
Sbjct: 525 TPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMG 584

Query: 397 MQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
             +   ++K  + ++ S    SCL+   G+   L E++R++S I
Sbjct: 585 CHLFGSMVKD-YQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHI 627


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 210/719 (29%), Positives = 354/719 (49%), Gaps = 58/719 (8%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           K  D   A         RD++++N +IS L R      AL ++ R+   G  P  FT +S
Sbjct: 50  KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 109

Query: 87  LVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           ++ AC  + +       HGV +K G    +++ +  +  YAK G IV   +   + L   
Sbjct: 110 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 169

Query: 144 N-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS------------F 190
           N V+YTA++ G     +  ++ ++F  M   G++++   L+ +L  S            +
Sbjct: 170 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 229

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
             + G+QIH   +++GF   +  HLNN+++ +Y +      A  +F E+ E +VVSW+  
Sbjct: 230 GNELGKQIHCLALRLGFGGDL--HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 287

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          ++      +R + FQ NE T I++L +                C++   
Sbjct: 288 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA----------------CFR--- 328

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                            G V   R IF  +      +WN+M++GYS    + +A+  F  
Sbjct: 329 ----------------SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 372

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M   +L P+  T++ IL + +  + L+   Q+H  +I++    +  ++S LI  Y +C  
Sbjct: 373 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 432

Query: 428 LNESKRVLSE-IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVL 485
           +  S+ +  + I++ +    N++ S   +     +AL L+R +  +     N ++F+ VL
Sbjct: 433 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 492

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +C+ +  L  G+  H L +K+ Y  D FVE+A+ DMYCKCG I+ A++ F  + R +  
Sbjct: 493 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 552

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN M+ GY  +G   E   L+ KM   G KPD IT+++VLT+C H+GLV      LS M
Sbjct: 553 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 612

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
             +HG+ P+L+HY CIVD LGR G LE A+   +  P    + +W+ LLS+C ++G++ L
Sbjct: 613 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 672

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
                 KL+ L P + + YVLLSN Y+S   W+D   L+  M +  + K PG SW   G
Sbjct: 673 ARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYG 731



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/569 (22%), Positives = 251/569 (44%), Gaps = 75/569 (13%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VY  + F+    K G++  A   F    + D V++  M+   V  G  +K+  V+  M  
Sbjct: 38  VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 97

Query: 173 LGLELNEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G   + F+L +VL A   V +G    + HG  VK G    +   + NA++++Y +CG  
Sbjct: 98  DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNI--FVGNALLSMYAKCGFI 155

Query: 230 LD-AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLS- 284
           +D  V++F+ +++P+ VS++  I   A     +EA  +F+ +     Q++   + N+LS 
Sbjct: 156 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 215

Query: 285 -----------SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
                       + G  +   GKQI     ++GF   + + N+L+ +Y K   +N A  I
Sbjct: 216 SAPREGCDSLSEIYGNEL---GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 272

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +   + VSWN MI G+ +    +++++    M +    PN  T  S+L A   S  +
Sbjct: 273 FAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV 332

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +                                     +R+ S I + +    NA+ S  
Sbjct: 333 ETG-----------------------------------RRIFSSIPQPSVSAWNAMLSGY 357

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                + EA+  +R +     + + +T S++L +CA +  LE GK IH + ++    ++ 
Sbjct: 358 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 417

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRD-SLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
            + S +I +Y +C  +E ++  F     +  +A WN+M+ G+  +    +   LF +M +
Sbjct: 418 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 477

Query: 573 FGVK-PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLL 625
             V  P+E ++  VL+SC     +   R +       HGL+ +  + +       + D+ 
Sbjct: 478 TAVLCPNETSFATVLSSCSRLCSLLHGRQF-------HGLVVKSGYVSDSFVETALTDMY 530

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            + G ++ A+   D + +  +  IW  ++
Sbjct: 531 CKCGEIDSARQFFDAV-LRKNTVIWNEMI 558



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 170/356 (47%), Gaps = 18/356 (5%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           NA ++   K G + +A  +FD +  +D VSWN+MI+     GF  +AL ++  M+    +
Sbjct: 42  NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 101

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN-ALNESKR 433
           P+ +T+AS+L A S        M+ H   +K+G   +  + + L++ Y KC   ++   R
Sbjct: 102 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 161

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL------KA 487
           V   + + N V   A+   L   +   EA++++R +     +V+    S +L      + 
Sbjct: 162 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 221

Query: 488 CAAMTDL---EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           C +++++   E GK IHCLAL+  +  D+ + ++++++Y K   +  A+  F ++   ++
Sbjct: 222 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 281

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             WN M++G+ Q     +      +M   G +P+E+T ++VL +C  +G V   R   S 
Sbjct: 282 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 341

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLSAC 657
           +       P +  +  ++         E A     QM    + PD      +LS+C
Sbjct: 342 IPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 392



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 207/454 (45%), Gaps = 47/454 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L ++ G   D  L+ +L+  + K  D   A     +    +++++N +I G  +  
Sbjct: 236 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 295

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +S  +++   R+R  G +P+  T  S++ AC                             
Sbjct: 296 RSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------------------- 326

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               +SG++ +    F         A+ AM+ GY     ++++   F +M+   L+ ++ 
Sbjct: 327 ---FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 383

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L+ +L +   ++    G+QIHG  ++        +H+ + ++ +Y  C +   +  +FD
Sbjct: 384 TLSVILSSCARLRFLEGGKQIHGVVIRTEISKN--SHIVSGLIAVYSECEKMEISECIFD 441

Query: 238 E-ITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQI---NEYTMINLLSSVGGER 290
           + I E D+  W+  I+     +   +A  LF+  R +   +   NE +   +LSS     
Sbjct: 442 DCINELDIACWNSMISGFRHNMLDTKALILFR--RMHQTAVLCPNETSFATVLSSCSRLC 499

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q      K G++    +  AL  MY KCG+++ AR  FD ++ K++V WN MI 
Sbjct: 500 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 559

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFL 409
           GY  NG  ++A+ ++  M+     P+G T  S+L A S+S  ++  +++ S + +  G  
Sbjct: 560 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIE 619

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
            +     C++   G+   L +++++      K++
Sbjct: 620 PELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 653



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/450 (22%), Positives = 188/450 (41%), Gaps = 90/450 (20%)

Query: 213 NHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------------DGV-- 258
            +L N +++LY+ CG    A K+FDE++  DV SW+  +   C            DG+  
Sbjct: 7   TYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPE 66

Query: 259 --------------------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA--GK 296
                               +A  ++K +  + F  + +T+ ++LS+    ++L    G 
Sbjct: 67  RDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSAC--SKVLDGVFGM 124

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVND-ARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +      K G  + + +GNAL+SMY KCG + D    +F+ L   + VS+ ++I G +  
Sbjct: 125 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARE 184

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASIL---------EAVSNSKSLKQAMQVHSHIIKS 406
               +A+ MF  M E  +  +   +++IL         +++S     +   Q+H   ++ 
Sbjct: 185 NKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRL 244

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  D  + + L+  Y K   +N ++ + +E+ + N V  N +           +++E  
Sbjct: 245 GFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFL 304

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             +  S  + N  T   VL AC    D+E G                             
Sbjct: 305 TRMRDSGFQPNEVTCISVLGACFRSGDVETG----------------------------- 335

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
                 +R F  I + S++ WNAM+ GY+ +  Y E  + F +M    +KPD+ T   +L
Sbjct: 336 ------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 389

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           +SC           +L     +HG++ + E
Sbjct: 390 SSCARL-------RFLEGGKQIHGVVIRTE 412


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 210/719 (29%), Positives = 354/719 (49%), Gaps = 58/719 (8%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           K  D   A         RD++++N +IS L R      AL ++ R+   G  P  FT +S
Sbjct: 84  KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143

Query: 87  LVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           ++ AC  + +       HGV +K G    +++ +  +  YAK G IV   +   + L   
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203

Query: 144 N-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS------------F 190
           N V+YTA++ G     +  ++ ++F  M   G++++   L+ +L  S            +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
             + G+QIH   +++GF   +  HLNN+++ +Y +      A  +F E+ E +VVSW+  
Sbjct: 264 GNELGKQIHCLALRLGFGGDL--HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321

Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          ++      +R + FQ NE T I++L +                C++   
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA----------------CFR--- 362

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                            G V   R IF  +      +WN+M++GYS    + +A+  F  
Sbjct: 363 ----------------SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M   +L P+  T++ IL + +  + L+   Q+H  +I++    +  ++S LI  Y +C  
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466

Query: 428 LNESKRVLSE-IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVL 485
           +  S+ +  + I++ +    N++ S   +     +AL L+R +  +     N ++F+ VL
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +C+ +  L  G+  H L +K+ Y  D FVE+A+ DMYCKCG I+ A++ F  + R +  
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WN M+ GY  +G   E   L+ KM   G KPD IT+++VLT+C H+GLV      LS M
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
             +HG+ P+L+HY CIVD LGR G LE A+   +  P    + +W+ LLS+C ++G++ L
Sbjct: 647 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 706

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
                 KL+ L P + + YVLLSN Y+S   W+D   L+  M +  + K PG SW   G
Sbjct: 707 ARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYG 765



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 135/615 (21%), Positives = 264/615 (42%), Gaps = 106/615 (17%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGE-----IVSAEMCFRDCL------------ 140
           +++HG  +++G  S  YL +  ++ Y + G+      V  EM  RD              
Sbjct: 26  KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85

Query: 141 --------------DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
                         + D V++  M+   V  G  +K+  V+  M   G   + F+L +VL
Sbjct: 86  GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145

Query: 187 GASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEP 242
            A   V +G    + HG  VK G    +   + NA++++Y +CG  +D  V++F+ +++P
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNI--FVGNALLSMYAKCGFIVDYGVRVFESLSQP 203

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLS------------SVG 287
           + VS++  I   A     +EA  +F+ +     Q++   + N+LS             + 
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
           G  +   GKQI     ++GF   + + N+L+ +Y K   +N A  IF  +   + VSWN 
Sbjct: 264 GNEL---GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI G+ +    +++++    M +    PN  T  S+L A   S  ++             
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG----------- 369

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
                                   +R+ S I + +    NA+ S       + EA+  +R
Sbjct: 370 ------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +     + + +T S++L +CA +  LE GK IH + ++    ++  + S +I +Y +C 
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECE 465

Query: 528 TIEDAKRAFRKICRD-SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK-PDEITYLAV 585
            +E ++  F     +  +A WN+M+ G+  +    +   LF +M +  V  P+E ++  V
Sbjct: 466 KMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATV 525

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTID 639
           L+SC     +   R +       HGL+ +  + +       + D+  + G ++ A+   D
Sbjct: 526 LSSCSRLCSLLHGRQF-------HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578

Query: 640 QMPIPPDAHIWQSLL 654
            + +  +  IW  ++
Sbjct: 579 AV-LRKNTVIWNEMI 592



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 192/427 (44%), Gaps = 50/427 (11%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N+Y + +LL     ER   +GK I  F  ++G      + N L+ +Y +CG  + AR +F
Sbjct: 6   NKY-LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVF 64

Query: 335 D------------YLIFK-------------------DSVSWNSMIAGYSENGFFNQALD 363
           D            +L F+                   D VSWN+MI+     GF  +AL 
Sbjct: 65  DEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALV 124

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           ++  M+    +P+ +T+AS+L A S        M+ H   +K+G   +  + + L++ Y 
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184

Query: 424 KCN-ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           KC   ++   RV   + + N V   A+   L   +   EA++++R +     +V+    S
Sbjct: 185 KCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLS 244

Query: 483 IVL------KACAAMTDL---EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            +L      + C +++++   E GK IHCLAL+  +  D+ + ++++++Y K   +  A+
Sbjct: 245 NILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAE 304

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F ++   ++  WN M++G+ Q     +      +M   G +P+E+T ++VL +C  +G
Sbjct: 305 LIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIW 650
            V   R   S +       P +  +  ++         E A     QM    + PD    
Sbjct: 365 DVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419

Query: 651 QSLLSAC 657
             +LS+C
Sbjct: 420 SVILSSC 426



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 207/454 (45%), Gaps = 47/454 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L ++ G   D  L+ +L+  + K  D   A     +    +++++N +I G  +  
Sbjct: 270 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 329

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +S  +++   R+R  G +P+  T  S++ AC                             
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------------------- 360

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               +SG++ +    F         A+ AM+ GY     ++++   F +M+   L+ ++ 
Sbjct: 361 ---FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +L+ +L +   ++    G+QIHG  ++        +H+ + ++ +Y  C +   +  +FD
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTEISKN--SHIVSGLIAVYSECEKMEISECIFD 475

Query: 238 E-ITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQI---NEYTMINLLSSVGGER 290
           + I E D+  W+  I+     +   +A  LF+  R +   +   NE +   +LSS     
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFR--RMHQTAVLCPNETSFATVLSSCSRLC 533

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+Q      K G++    +  AL  MY KCG+++ AR  FD ++ K++V WN MI 
Sbjct: 534 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFL 409
           GY  NG  ++A+ ++  M+     P+G T  S+L A S+S  ++  +++ S + +  G  
Sbjct: 594 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIE 653

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
            +     C++   G+   L +++++      K++
Sbjct: 654 PELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 687



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 199/468 (42%), Gaps = 92/468 (19%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+ IHGF V++G  S    +L N +++LY+ CG    A K+FDE++  DV SW+  +   
Sbjct: 25  GKVIHGFIVRMGMKSDT--YLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82

Query: 255 C------------DGV----------------------EAFGLFKDLRFNDFQINEYTMI 280
           C            DG+                      +A  ++K +  + F  + +T+ 
Sbjct: 83  CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142

Query: 281 NLLSSVGGERILRA--GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND-ARSIFDYL 337
           ++LS+    ++L    G +      K G  + + +GNAL+SMY KCG + D    +F+ L
Sbjct: 143 SVLSAC--SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL---------EAVS 388
              + VS+ ++I G +      +A+ MF  M E  +  +   +++IL         +++S
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
                +   Q+H   ++ GF  D  + + L+  Y K   +N ++ + +E+ + N V  N 
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +           +++E    +  S  + N  T   VL AC    D+E G           
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG----------- 369

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
                                   +R F  I + S++ WNAM+ GY+ +  Y E  + F 
Sbjct: 370 ------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           +M    +KPD+ T   +L+SC           +L     +HG++ + E
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARL-------RFLEGGKQIHGVVIRTE 446


>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 836

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 216/734 (29%), Positives = 384/734 (52%), Gaps = 29/734 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+ L+ + G   D  + T L+  + K  D   A R +FD    +DI+T+N ++SGLA+ 
Sbjct: 121 RIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSA-RQVFDKMPVKDIVTWNTMVSGLAQN 179

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
             S  AL+LF  +    +  D  +  +L+ A   L++N++   +HG+ +K GF+S     
Sbjct: 180 GCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSA--FS 237

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           SG I+ Y K  ++ +AE  F +    D  ++  M+  Y  NG F++  E+F  MR+  + 
Sbjct: 238 SGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVR 297

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +N+ +  + L A+    ++++G  IH + V+ G +S +   +  +++N+Y +CG+   A 
Sbjct: 298 MNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDI--SVATSLINMYSKCGELELAE 355

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F +I + DVVSWS  IA+   A    EA  LF+D+    F+ N  T+ ++L    G  
Sbjct: 356 QLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVA 415

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             R GK I  +  K      +    A+ISMY KCG  +     F+ L  KD++++N++  
Sbjct: 416 ASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQ 475

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY++ G  ++A D++ +M    + P+  TM  +L+  +      +   V+  IIK GF  
Sbjct: 476 GYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDS 535

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
           +  +   LI  + KC+AL  +K +  +   +K+ V  N + +  +      EA+  +R +
Sbjct: 536 ECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQM 595

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                + N  TF  +++A A +  L  G ++H   ++  +     V ++++DMY KCG I
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMI 655

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E +K+ F +I   ++  WN M+  YA HG  +   +LF  M +  +KPD +++L+VL++C
Sbjct: 656 ESSKKCFIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSAC 715

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGL  E +     M + H +  ++EHYAC+VDLLG+ GL + A   + +M +     +
Sbjct: 716 RHAGLAEEGKRIFKEMEERHKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGV 775

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL++  ++ N+ L   A  +L++L+P N S Y     L    G  N+V +++     
Sbjct: 776 WGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYGQDQRL----GEANNVSRIK----- 826

Query: 710 KFLCKEPGYSWIHV 723
               K P  SWI V
Sbjct: 827 ----KVPACSWIQV 836



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 189/725 (26%), Positives = 348/725 (48%), Gaps = 28/725 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  LI  G  L P     LI+ ++ F     + + +       ++ +N++I G  R  
Sbjct: 23  QIHGSLIVAG--LKP--HNQLINAYSLFQRPDLSRKIVDSVPYPGVVLWNSMIRGYTRAG 78

Query: 61  QSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC-GSL--QENEIVHGVCLKLGFSSRVYLV 116
               AL++F  +   +G+ PD +TF+  +KAC GS+  +E   +H +  ++GF S VY+ 
Sbjct: 79  LHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIG 138

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +E Y K+G++VSA   F      D V +  MV G   NG   ++  +F +M S  ++
Sbjct: 139 TALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVD 198

Query: 177 LNEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  SL  ++ A   +++ +    +HG  +K GF S      ++ ++++Y +C     A 
Sbjct: 199 IDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSA----FSSGLIDMYCKCADLYAAE 254

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+E+   D  SW   +AA A +G   E   LF  +R  D ++N+    + L +     
Sbjct: 255 CVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVG 314

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G  I  +  + G M  +S+  +LI+MY KCG++  A  +F  +  +D VSW++MIA
Sbjct: 315 NLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIA 374

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            + + G  ++AL +F  M+     PN  T+ S+L+  +   + +    +H + IK+    
Sbjct: 375 SFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVES 434

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT-- 468
           +    + +I+ Y KC   + + +    +  K+A+  NALA         ++A ++Y+   
Sbjct: 435 ELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMK 494

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           + G C +    T   +L+ CA  +D  +G  ++   +K  +D +  V  A+IDM+ KC  
Sbjct: 495 LHGVCPD--SGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDA 552

Query: 529 IEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           +  AK  F K     S   WN MM GY  HG   E    F +M     +P+ +T++ ++ 
Sbjct: 553 LAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVR 612

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +      +    +  S +    G          +VD+  + G++E +K    ++    + 
Sbjct: 613 AAAELAALSLGMSVHSSLIQF-GFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIR-NKNM 670

Query: 648 HIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
             W ++LSA   +G  N  + L    +  EL+PD+ S   +LS     AG+  +  ++ K
Sbjct: 671 VSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACR-HAGLAEEGKRIFK 729

Query: 706 EMKEK 710
           EM+E+
Sbjct: 730 EMEER 734



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 5/294 (1%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIG--NALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
           R+LR  K  +      G + V  +   N LI+ Y    + + +R I D + +   V WNS
Sbjct: 10  RMLRECKNFRLLLQIHGSLIVAGLKPHNQLINAYSLFQRPDLSRKIVDSVPYPGVVLWNS 69

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           MI GY+  G   +AL++F +M E   I P+ YT    L+A + S   ++ +++H  I + 
Sbjct: 70  MIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEM 129

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  D  + + L+  Y K   L  +++V  ++  K+ V  N + S L    C +EAL L+
Sbjct: 130 GFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLF 189

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           R +  S  +++  +   ++ A + +   +  + +H L +K  +       S +IDMYCKC
Sbjct: 190 RDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAF--SSGLIDMYCKC 247

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
             +  A+  F ++     + W  MM  YA +G + EV  LF+ M  + V+ +++
Sbjct: 248 ADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKV 301


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 206/683 (30%), Positives = 347/683 (50%), Gaps = 22/683 (3%)

Query: 84  FSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG-------FIENYAKSGEIVSAE 133
           +++LV AC    SL +   VH   +    SS    ++G        I  Y +     SA 
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF--- 190
             F +    + V++ +++  +V NG    +  +F  M   G   ++F+L + + A     
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           DV  G Q+H   +K    S +   + NA++ +Y + G   D   +F+ I + D++SW   
Sbjct: 167 DVGTGRQVHAHALKSERGSDLI--VQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSI 224

Query: 251 IAA-ACDG--VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           IA  A  G  +EA  +F+ +        NE+   +   + G       G+QI     K  
Sbjct: 225 IAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 284

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               + +G +L  MY +   ++ AR  F  +   D VSWNS++  YS  G  ++AL +F 
Sbjct: 285 LDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 344

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M +  L P+G T+  +L A     +L     +HS+++K G   D S+ + L++ Y +C+
Sbjct: 345 EMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCS 404

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L+ +  V  EI  ++ V  N++ +     +   E L+L+  +  S   ++  + + VL 
Sbjct: 405 DLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 464

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSL 544
           A A +   E  K +H  A KA    D  + + +ID Y KCG+++DA R F  +   RD  
Sbjct: 465 ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVF 524

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
           + W+++++GYAQ G   E  +LF++M   G++P+ +T++ VLT+C   G V E   Y S 
Sbjct: 525 S-WSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSI 583

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           M   +G++P  EH +CIVDLL R G L  A   IDQMP  PD  +W++LL+A  ++ +++
Sbjct: 584 MEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDME 643

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           +G  A   +L + P + + YVLL N+YA++G WN+  +L+K M+   + K PG SW+ + 
Sbjct: 644 MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLK 703

Query: 725 GYTHHFYAGDSSHSQSKEIYKEL 747
           G    F   D SH +S+EIY  L
Sbjct: 704 GELKVFIVEDRSHPESEEIYAML 726



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 220/451 (48%), Gaps = 16/451 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K+    D I+   L++ ++K       F      +++D+I++ ++I+G A+  
Sbjct: 173 QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG 232

Query: 61  QSGPALKLFDRLRYQGL-RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
               AL++F ++  +G   P+ F F S  +AC   GS +  E +HG+ +K      +Y+ 
Sbjct: 233 FEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG 292

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
               + YA+   + SA + F      D V++ ++V  Y   G   ++  +F EMR  GL 
Sbjct: 293 CSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 352

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  ++  +L A      +  G  IH + VK+G    V   + N+++++Y RC     A+
Sbjct: 353 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS--VCNSLLSMYARCSDLSSAM 410

Query: 234 KMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            +F EI + DVV+W+  I  AC       E   LF  L  ++  ++  ++ N+LS+    
Sbjct: 411 DVFHEIKDQDVVTWNS-ILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 469

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSM 348
                 KQ+ A+ +K G ++   + N LI  Y KCG ++DA  +F+ +   +D  SW+S+
Sbjct: 470 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 529

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSG 407
           I GY++ G+  +ALD+F  M    + PN  T   +L A S    + +    +S +  + G
Sbjct: 530 IVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 589

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +      SC++    +   L E+   + ++
Sbjct: 590 IVPTREHCSCIVDLLARAGKLTEAANFIDQM 620



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 263/535 (49%), Gaps = 22/535 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           + +L   LI+ + + A    A +   +   R+ +++ ++I+   +  ++G AL LF  + 
Sbjct: 85  NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G   D F   S V+AC   G +     VH   LK    S + + +  +  Y+K+G + 
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVL--- 186
              M F    D D +++ +++ G+   G   ++ +VF +M   G    NEF   +     
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRAC 264

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM-FDEITEPDVV 245
           GA    + GEQIHG  +K      +  ++  ++ ++Y R  + LD+ ++ F  I  PD+V
Sbjct: 265 GAVGSWEYGEQIHGLSIKYRLDRDL--YVGCSLSDMYARF-KNLDSARVAFYRIEAPDLV 321

Query: 246 SWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           SW+  + A + +G+  EA  LF ++R +  + +  T+  LL +  G   L  G+ I ++ 
Sbjct: 322 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 381

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K+G    VS+ N+L+SMY +C  ++ A  +F  +  +D V+WNS++   +++    + L
Sbjct: 382 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVL 441

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITT 421
            +F  + +     +  ++ ++L A +     +   QVH++  K+G L+DD M+S  LI T
Sbjct: 442 KLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAG-LVDDRMLSNTLIDT 500

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGS 479
           Y KC +L+++ R+  EI   N    +  + ++ YA      EAL+L+  +       N  
Sbjct: 501 YAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHV 559

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           TF  VL AC+ +  + +G   + + ++  Y      E  S ++D+  + G + +A
Sbjct: 560 TFIGVLTACSRVGFVNEGCYYYSI-MEPEYGIVPTREHCSCIVDLLARAGKLTEA 613



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L IK     D  +  +L   + +F +   A    +  +  D++++N++++  +   
Sbjct: 275 QIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEG 334

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  +R  GLRPD  T   L+ AC    +L    ++H   +KLG    V + +
Sbjct: 335 LLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 394

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+  ++ SA   F +  D D V + +++     +   ++  ++F  +      L
Sbjct: 395 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 454

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL  VL AS ++   E   Q+H +  K G +      L+N +++ Y +CG   DA++
Sbjct: 455 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD--RMLSNTLIDTYAKCGSLDDAMR 512

Query: 235 MFDEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F+ +    DV SWS  I          EA  LF  +R    + N  T I +L++     
Sbjct: 513 LFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVG 572

Query: 291 ILRAGKQIQAFCYKVGFME----VVSIG---NALISMYGKCGQVNDARSIFDYLIFK-DS 342
            +  G      CY    ME    +V      + ++ +  + G++ +A +  D + F+ D 
Sbjct: 573 FVNEG------CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDI 626

Query: 343 VSWNSMIAG 351
           + W +++A 
Sbjct: 627 IMWKTLLAA 635



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 33/273 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S L+K G   D  +  +L+S + + +D   A     + +++D++T+N++++  A+   
Sbjct: 377 IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH 436

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
               LKLF  L       D  + ++++ A   L   E+   VH    K G      L + 
Sbjct: 437 PEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT 496

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G +  A   F    +  +V ++++++ GY   G   ++ ++F  MRSLG+  
Sbjct: 497 LIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRP 556

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN---------------NAIMNL 222
           N  +   VL A               +VGF++  C + +               + I++L
Sbjct: 557 NHVTFIGVLTAC-------------SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDL 603

Query: 223 YVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAA 254
             R G+  +A    D++  EPD++ W   +AA+
Sbjct: 604 LARAGKLTEAANFIDQMPFEPDIIMWKTLLAAS 636


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 209/720 (29%), Positives = 366/720 (50%), Gaps = 15/720 (2%)

Query: 46  IITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHG 102
           I ++NA+I+  +        L  +  +    +  DA+TF SL+KAC SL    +   +H 
Sbjct: 34  INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
             L  G S   Y+ S  I  YAK G    A   F    + + V +T+++  Y   G   +
Sbjct: 94  RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153

Query: 163 SKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +  +F EMR  G++ +  ++ ++L    ++   + +HG  +  GF+S +  +L+N+++++
Sbjct: 154 AFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDI--NLSNSMLSM 211

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTM 279
           Y +C     + K+FD + + D+VSW+  ++A        E   L K +R   F+ +  T 
Sbjct: 212 YGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTF 271

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            ++LS       L+ G+ +     +  F     +  +LI MY K G ++ A  +F+  + 
Sbjct: 272 GSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLD 331

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD V W +MI+G  +NG  ++AL +F  ML+F +  +  TMAS++ A +   S      V
Sbjct: 332 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSV 391

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H ++ +    +D +  + L+T + KC  L++S  V  +++K+N V  NA+ +        
Sbjct: 392 HGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYV 451

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            +AL L+  +    +  +  T   +L+ CA+   L  GK IH   ++      I V++++
Sbjct: 452 CKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSL 511

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           +DMYCKCG ++ A+R F ++    L  W+A+++GY  HG        ++K  + G+KP+ 
Sbjct: 512 VDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNH 571

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           + +L+VL+SC H GLV +       M+   G+ P LEH+AC+VDLL R G +E A     
Sbjct: 572 VIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYK 631

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +    P   +   +L AC   GN +LG    + +L L+P +   +V L++ YAS   W +
Sbjct: 632 KKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEE 691

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY-------KELIKLYE 752
           VG+    M+   L K PG+S+I + G    F+   +SH Q +EI        KE+IK+ E
Sbjct: 692 VGEAWTHMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKFLRKEMIKMEE 751



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 264/555 (47%), Gaps = 19/555 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           ++  ++ +G  LD  ++++LI+ + KF  F    R +FD    R+++ + ++I   +R  
Sbjct: 91  LHQRILVSGLSLDAYIASSLINFYAKFG-FADVARKVFDFMPERNVVPWTSIIGCYSRTG 149

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   A  LFD +R QG++P + T  SL+     L   + +HG  +  GF S + L +  +
Sbjct: 150 RVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSML 209

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K   I  +   F      D V++ ++V  Y   G   +   +   MR  G E +  
Sbjct: 210 SMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQ 269

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  +VL  +    ++K G  +HG  ++  F   +  H+  +++ +Y++ G    A +MF+
Sbjct: 270 TFGSVLSVAASRGELKLGRCLHGQILRTCF--DLDAHVETSLIVMYLKGGNIDIAFRMFE 327

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              + DVV W+  I+         +A  +F+ +     + +  TM +++++         
Sbjct: 328 RSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNL 387

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G  +  + ++      ++  N+L++M+ KCG ++ +  +FD +  ++ VSWN+MI GY++
Sbjct: 388 GTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQ 447

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF----LL 410
           NG+  +AL +F  M      P+  T+ S+L+  +++  L     +HS +I++G     L+
Sbjct: 448 NGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILV 507

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D S    L+  Y KC  L+ ++R  +++   + V  +A+     Y      AL  Y    
Sbjct: 508 DTS----LVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFL 563

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTI 529
            S  + N   F  VL +C+    +EQG  I+  +        ++   + V+D+  + G +
Sbjct: 564 ESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRV 623

Query: 530 EDAKRAFRKICRDSL 544
           E+A   ++K   D +
Sbjct: 624 EEAYNLYKKKFSDPV 638


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 212/688 (30%), Positives = 346/688 (50%), Gaps = 27/688 (3%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-VYLVSGFIENYAKSGEIVSAEMCFRD 138
           D+     LV+ C S+   +++H         SR  YL S  +  Y + G + SA   F  
Sbjct: 28  DSAAAVRLVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHK 87

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEG 195
                 V +T ++  YV  G    +  +F  +   G+ L+     +VL A      +  G
Sbjct: 88  IAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAG 147

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIAAA 254
             IH   V+ G   G+   + +A++++Y RCG   DA  +F  +    DVV W+  I A 
Sbjct: 148 RLIHRCAVEAGL--GLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITAN 205

Query: 255 CDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF--CY-KVGFM 308
                  EA  +F  +       +  T +++  +      LRA  Q++ F  C  + G  
Sbjct: 206 SQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRA-SQVKGFHTCLDETGLG 264

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +  AL++ Y +CG+++ AR  F  +  +++VSW SMIA +++ G    A++ F  M
Sbjct: 265 SDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHL-LAVETFHAM 323

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L   ++P   T +++  A+   + L  A  V +   + G   D ++++ L+  Y +C+  
Sbjct: 324 LLEGVVP---TRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQ 380

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV---- 484
            ++ RV S  ++         A + VYA C          +WG+  E   S   I+    
Sbjct: 381 EDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTF--KLWGAAIERGISPDRILYITA 438

Query: 485 LKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRD 542
           L ACA++  L +G+ IH C+A   R D+D+ + +A++ MY +CG++ DA+ AF  +  RD
Sbjct: 439 LDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARD 498

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            ++ WNAM+   AQHG   +  +LF  M + G   + + +L +L++C HAGLV     + 
Sbjct: 499 EIS-WNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHF 557

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           S M+  HG++P  EHY C+VDLLGR G L  A   +  MP+PPDA  W +L+ AC IYG+
Sbjct: 558 SAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGD 617

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            + G  A  ++LEL+ ++ + YV L N+Y++AG W D   +RK M +  L K PG S I 
Sbjct: 618 TERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIE 677

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +    H F   D SH QS+ IY EL ++
Sbjct: 678 IRSKVHEFVVRDRSHPQSEAIYAELERV 705



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/504 (22%), Positives = 212/504 (42%), Gaps = 31/504 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+++L+  + +      A        ++ I+ +  LIS       S  A+ LF R+ 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 74  YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +G+  DA  F S++ AC S   L    ++H   ++ G   +  + S  +  Y + G + 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 131 SAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA- 188
            A   F      LD V + AM+     NG   ++ E+F  M  LG+  +  +  +V  A 
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240

Query: 189 -SFDVKEGEQIHGFGV---KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
            S       Q+ GF     + G  S V   +  A++N Y RCG+   A + F  + E + 
Sbjct: 241 SSSPSLRASQVKGFHTCLDETGLGSDVV--VATALVNAYARCGEIDCAREFFAAMPERNA 298

Query: 245 VSWSERIAAACD-----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           VSW+  IAA         VE F           +    T   L +++ G   L   + ++
Sbjct: 299 VSWTSMIAAFAQIGHLLAVETFHAML------LEGVVPTRSTLFAALEGCEDLHTARLVE 352

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN-----SMIAGYSE 354
           A   ++G    V+I   L+  Y +C    DA  +F     ++   W+     +MIA Y++
Sbjct: 353 AIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSA---REEGEWDAALVTAMIAVYAQ 409

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-S 413
                    ++   +E  + P+     + L+A ++  +L +  Q+H+ +     L  D +
Sbjct: 410 CRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVT 469

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + +++ YG+C +L +++     +  ++ +  NA+ S         +  +L+R +    
Sbjct: 470 LGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEG 529

Query: 474 REVNGSTFSIVLKACAAMTDLEQG 497
            +     F  +L ACA    +E G
Sbjct: 530 FDAERVAFLNLLSACAHAGLVEAG 553


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 206/709 (29%), Positives = 373/709 (52%), Gaps = 15/709 (2%)

Query: 58  RFCQSGPALKLFDRLRYQGLR-PDAFTFSSLVKACGSL--QENEIVHGVCLKLGFSSRVY 114
           ++  S  A   + +++  G +  D     S++KAC SL  +  + +H   LK GF S   
Sbjct: 26  KWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTS 85

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             +  ++ Y K+G + SA   F      D+V++  M+ G++  G  DK    F + R + 
Sbjct: 86  TGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIA 145

Query: 175 LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            E N  +L   + A   +   +EG ++HG+ ++ GFL      + N+++++Y     +  
Sbjct: 146 FEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLD--IPSVQNSLLSMYADNDME-R 202

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFN-DFQINEYTMINLLSSVG 287
           A ++FDE+ E DV+SWS  I       EA     LF ++  N   +++  TM+++L +  
Sbjct: 203 AEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACA 262

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               +  G+ +       G    + +GN++I MY KC     A   F+ +  +++VSWNS
Sbjct: 263 NTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNS 322

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I+G       ++AL +F  M +     +  T+ ++L++        Q   +HS +I+ G
Sbjct: 323 IISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWG 382

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           + L++ +I+ LI  Y KC+ +  + ++   +  K+ V  +A+ +   +     EA+ L++
Sbjct: 383 YELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQ 442

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +  +  + NG T   +L+A +   DL++ K  H +A++     ++ V +A++DMY KCG
Sbjct: 443 EMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCG 502

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            I  +++AF +I   ++  W AM+     +G   +   L ++M   G+KP+ +T L+VL+
Sbjct: 503 EIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLS 562

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP--IPP 645
           +C H GLV E  ++   M   HG+ P LEHY+C+VD+L R G L  A   I++MP  +  
Sbjct: 563 ACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRD 622

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
            A +W +LLSAC   GN  LG  A  ++LEL+P + + Y L S++YA++G+W D  ++R 
Sbjct: 623 GAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRW 682

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            +K + +    GYS +HV      F AGD SH ++ EI+  + +L++ M
Sbjct: 683 LVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCM 731



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 160/576 (27%), Positives = 275/576 (47%), Gaps = 41/576 (7%)

Query: 2   IYSLLIKNGHHLDPILST--TLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLAR 58
           I++ L+K G   D + ST  +++  + K      A  F+FD+ ++RD +++N +I G   
Sbjct: 71  IHASLLKQG--FDSLTSTGNSVLDFYMKTGALDSAL-FVFDSMRSRDSVSWNIMIHGHLS 127

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF----SS 111
              S   L  F + R     P+  T    + AC   G+++E   +HG  ++ GF    S 
Sbjct: 128 RGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSV 187

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
           +  L+S + +N  +  E +  EMC RD      ++++ M+ GYV  GE   + ++F+EM 
Sbjct: 188 QNSLLSMYADNDMERAEELFDEMCERDV-----ISWSVMIGGYVQTGEAKMALQLFLEMT 242

Query: 172 S-LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           S   +EL+  ++ +VL A   + D+  G  +HG  +  G    +   + N+I+++Y +C 
Sbjct: 243 SNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDL--FVGNSIIDMYSKCD 300

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLS 284
               A K F+E+   + VSW+  I+         EA  LF  +    F+ +E T++NLL 
Sbjct: 301 DHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQ 360

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S          K I +   + G+     + N+LI  Y KC  +  A  +FD L  KD+VS
Sbjct: 361 SCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVS 420

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W++MIAG++  G  ++A+ +F  M +    PNG T+ S+LEA S S  LK++   H   I
Sbjct: 421 WSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAI 480

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G   + ++ + ++  Y KC  +  S++   +I +KN V   A+ +         +AL 
Sbjct: 481 RRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALA 540

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SA 518
           L   +     + N  T   VL AC+    +E+G     L+      QD  VE      S 
Sbjct: 541 LLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG-----LSFFENMVQDHGVEPGLEHYSC 595

Query: 519 VIDMYCKCGTIEDAKRAFRKI---CRDSLAGWNAMM 551
           ++DM  + G +  A     K+    RD    W A++
Sbjct: 596 MVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALL 631



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 195/407 (47%), Gaps = 28/407 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ ++I  G   D  +  ++I  ++K  D   AF+   +   R+ +++N++ISGL R  +
Sbjct: 273 VHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEK 332

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSG 118
              AL LF  +   G R D  T  +L+++C    +    + +H + ++ G+    ++++ 
Sbjct: 333 HSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINS 392

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ Y+K   I  A   F      D V+++AM+ G+   G+ D++  +F EM     + N
Sbjct: 393 LIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPN 452

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++ ++L A   S D+K  +  HG  ++ G  + V   +  AI+++Y +CG+   + K 
Sbjct: 453 GVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVA--VGTAILDMYAKCGEIGLSRKA 510

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD+I E ++VSW   IAA   +G+  +A  L  +++ +  + N  T +++LS+     ++
Sbjct: 511 FDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLV 570

Query: 293 RAG-----KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI--FKDSVS- 344
             G       +Q    + G        + ++ M  + G++N A ++ + +    +D    
Sbjct: 571 EEGLSFFENMVQDHGVEPGLEHY----SCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGL 626

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPN---GYTMASILEAVS 388
           W ++++    +G  N  L          L P    GY +AS + A S
Sbjct: 627 WGALLSACRSSG--NSRLGAGAAFRVLELEPQSSAGYFLASSMYAAS 671


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 188/561 (33%), Positives = 304/561 (54%), Gaps = 7/561 (1%)

Query: 199 HGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA---AA 254
           H    K+   S V N ++  +++N+Y + G   DA +MFD + + +  SWS  +A   A 
Sbjct: 140 HALACKIP--SAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAE 197

Query: 255 CDGVEAFGLFK-DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               EAF LF+  L     + +E+    +LS+V     L  G+Q+     K G ++ VS+
Sbjct: 198 KCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSV 257

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N+L++MY K G +  A  +F+    ++S++W++MI GY++NG  + A+ MF  M     
Sbjct: 258 ENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 317

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P  +T   +L A S+  +L    Q H  ++K GF +   + S L+  Y KC  + ++K 
Sbjct: 318 TPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKE 377

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              ++ + + V   A+ S  V    H EAL LY  +       + ST +  L+ACA +  
Sbjct: 378 GFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAA 437

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           LE GK +H   +K        V SA+  MY KCG +ED    FR+I    +  WN+++ G
Sbjct: 438 LEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISG 497

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           ++Q+GC +   +LF +M   G  PD IT++ +L +C H GLV     Y S M+  +GL P
Sbjct: 498 FSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTP 557

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           +L+HYAC+VD+L R G+L+ AK  I+ + I     +W+ +L AC    + D+G  AG +L
Sbjct: 558 RLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERL 617

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           +EL   + S Y+LLSN+YAS   WNDV ++R  M+ + + K+PG SW+ +    H F  G
Sbjct: 618 MELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVG 677

Query: 734 DSSHSQSKEIYKELIKLYEHM 754
           +  H +++ I  +L +L +HM
Sbjct: 678 EQQHPEAENINAQLRRLAKHM 698



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 155/610 (25%), Positives = 269/610 (44%), Gaps = 40/610 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRF-LFD---TQNRDIITYNALISGLA 57
           +++  +K+G      ++ +LI+ ++       A  F +FD      RD+ ++N+L++ L+
Sbjct: 34  LHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLNPLS 93

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIV---HGVCLKLGFS-SRV 113
           R        +    L    + P   +F++   A             H +  K+  + S V
Sbjct: 94  RHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNV 153

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRS 172
           Y+ +  +  Y K G +  A   F      ++ +++ MV GY      +++ ++F + +  
Sbjct: 154 YVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 213

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
              E +EF  TAVL A      +  GEQ+HG  VK G L  V   + N+++ +Y + G  
Sbjct: 214 CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVS--VENSLVTMYAKAGCM 271

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +F+   E + ++WS  I       E   A  +F  +    F   E+T + +L++ 
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GKQ      K+GF   + + +AL+ MY KCG + DA+  FD L   D V W 
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M++G+ +NG   +AL ++  M +  +IP+  T+AS L A +   +L+   Q+H+ I+K 
Sbjct: 392 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 451

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G  L   + S L T Y KC  L +   V   I  ++ +  N++ S      C   AL+L+
Sbjct: 452 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 511

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-----ALKARYDQ-----DI--- 513
             +       +  TF  +L AC+ M  +++G     L      L  R D      DI   
Sbjct: 512 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 571

Query: 514 ---------FVESAVIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
                    F+ES  ID   C    +  A R+ R     + AG   M +G      Y  +
Sbjct: 572 AGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILL 631

Query: 564 SNLFNKMSKF 573
           SN++    K+
Sbjct: 632 SNIYASQRKW 641



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 158/293 (53%), Gaps = 13/293 (4%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q++ L++K+G  LD + +  +L++ + K      AF     ++ R+ IT++A+I+G A+ 
Sbjct: 241 QMHGLIVKDGL-LDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQN 299

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            ++  A+ +F ++   G  P  FTF  ++ A    G+L   +  HG+ +KLGF  ++Y+ 
Sbjct: 300 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK 359

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK G I  A+  F    ++D V +TAMV G+V NGE +++  ++  M   G+ 
Sbjct: 360 SALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 419

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ ++ + L A   +   + G+Q+H   VK G   G+   + +A+  +Y +CG   D +
Sbjct: 420 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL--GLGAPVGSALSTMYSKCGNLEDGM 477

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
            +F  I + DV++W+  I+       G  A  LF++++      +  T IN+L
Sbjct: 478 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL 530


>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 676

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 170/538 (31%), Positives = 292/538 (54%), Gaps = 4/538 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQ 273
           N++++LYV+CG+  DA+K+FDE+   DV+S +          E    F L K +      
Sbjct: 94  NSLLSLYVKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRM-LGSGG 152

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            ++ T+  +LS           K I A     G+ + +S+GN LI+ Y KCG     R +
Sbjct: 153 FDQATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWV 212

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  ++ ++W ++I+G  EN      L +FC M    + PN  T  S L A S S+ +
Sbjct: 213 FSEMAHRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMI 272

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            +  Q+H+ + K G   +  + S L+  Y KC ++ ++ ++     + + V +  +   L
Sbjct: 273 VEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGL 332

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  EA++ +  +  +  E++ +  S +L        L  GK +H L +K ++  + 
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNT 392

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           FV + +I+MY KCG + D++  FR++ + +   WN+M+  +A+HG       L+ +M+  
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            VKP ++T+L++L +C H GL+ + R  L+ M ++HG+ P+ EHY CI+D+LGR GL++ 
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKE 512

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           AK  ID +P+ PD  IWQ+LL AC+ +G+ ++G  A  +L E  PD+ + ++L++N+Y+S
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFETAPDSSAAHILMANIYSS 572

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
            G W +  K  K MKE  + KE G SWI +   TH F   D  H Q++ IY  L  L+
Sbjct: 573 RGKWKERAKTIKRMKEMGVTKETGISWIEMEKKTHSFVVEDKMHPQAEAIYDVLSGLF 630



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 184/367 (50%), Gaps = 15/367 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARFC 60
           I++L I +G+  +  +   LI+ + K      + R++F +  +R++IT+ A+ISGL    
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFK-CGCSVSGRWVFSEMAHRNVITWTAVISGLIENE 235

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
                L+LF  +R   + P++ T+ S + AC   Q   E + +H +  K G  S + + S
Sbjct: 236 LHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQIHALLWKFGIESELCIES 295

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G I  A   F    ++D V+ T ++ G   NG  +++ + F+ M   G+E+
Sbjct: 296 ALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   ++A+LG SF    +  G+Q+H   +K  F       +NN ++N+Y +CG   D+  
Sbjct: 356 DANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGN--TFVNNGLINMYSKCGDLTDSQT 413

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + + VSW+  IAA      G+ A  L++++   + +  + T ++LL +     +
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473

Query: 292 LRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G+++     +V G          +I M G+ G + +A+S  D L  K D   W +++
Sbjct: 474 IDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSLPLKPDCKIWQALL 533

Query: 350 AGYSENG 356
              S +G
Sbjct: 534 GACSFHG 540



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 191/415 (46%), Gaps = 38/415 (9%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY-----SENGFFNQALDMFCH 367
           + N+L+S+Y KCG++ DA  +FD +  +D +S N +  G+     +E+GF          
Sbjct: 92  VWNSLLSLYVKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFV--------- 142

Query: 368 MLEFSLIPNGY---TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           +L+  L   G+   T+  +L      +       +H+  I SG+  + S+ + LIT+Y K
Sbjct: 143 LLKRMLGSGGFDQATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFK 202

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C      + V SE+  +N +   A+ S L+    H + L L+  +       N  T+   
Sbjct: 203 CGCSVSGRWVFSEMAHRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSA 262

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L AC+    + +G+ IH L  K   + ++ +ESA++DMY KCG+IEDA + F        
Sbjct: 263 LAACSGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDE 322

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
                +++G AQ+G   E    F +M + GV+ D     A+L        V      L  
Sbjct: 323 VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAILG-------VSFVDNSLGL 375

Query: 605 MSDLHGLIPQLEHYAC--------IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              LH L+  ++   C        ++++  + G L  ++    +MP   +   W S+++A
Sbjct: 376 GKQLHSLV--IKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAA 432

Query: 657 CTIYGN--IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
              +G+    L L      LE++P  + T++ L +  +  G+ +   +L  EMKE
Sbjct: 433 FARHGHGLAALKLYEEMTTLEVKP-TDVTFLSLLHACSHVGLIDKGRELLNEMKE 486



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL+IK     +  ++  LI+ ++K  D   +         R+ +++N++I+  AR  
Sbjct: 378 QLHSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----------LQENEIVHGV 103
               ALKL++ +    ++P   TF SL+ AC            L E + VHG+
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490


>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 180/534 (33%), Positives = 295/534 (55%), Gaps = 11/534 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
           G Q+H   +K+GF   +  ++  A++++Y +C    DA K+FDE++ P VV+W+  +   
Sbjct: 87  GIQVHSTIIKLGF--SLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGY 144

Query: 254 --ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA--GKQIQAFCYKVGFME 309
             A   + A  LF ++     +   +++   L  VG  ++ +   G Q+ A   K+ F  
Sbjct: 145 LQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGL--VGCSQLQKGDLGSQLHAMSLKLRFSS 202

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V +G  LI MY KC  + D+R +FD ++ K+  +W SMI+GY+ N   ++A+ +   ML
Sbjct: 203 NVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREML 262

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NAL 428
             +L PNG T  S+L + S  +   +  Q+H  II  G+  ++ +   L+T Y +C  +L
Sbjct: 263 HLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSL 322

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            + ++V S I   + +  NA+ +         EALE +  +     +V+  TF+ + KA 
Sbjct: 323 EDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAI 382

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
              + LE+GK IH L  K  Y  ++ V++ ++ MY + G I D+K  F  +    L  WN
Sbjct: 383 GMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWN 442

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ G A HGC  E  +LF KM +  +KPD  ++LAVLT+C H GL+ +   Y   M + 
Sbjct: 443 SLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNS 502

Query: 609 HGL-IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             +  P+LEHYA +VDL GR G L  A+  I+ +PI P   I+++LLSAC I+GN D+ +
Sbjct: 503 ELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAI 562

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
               KLLEL P + +TY++LSN     G W+D   +R+ M  + + KEPG+SW+
Sbjct: 563 RTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 228/461 (49%), Gaps = 20/461 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +IK G  L+P + T L+  + K      A +   +     ++T+N+L++G  +  
Sbjct: 89  QVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAG 148

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ LF  +  +G+ P  F+ S  +  C  LQ+ ++   +H + LKL FSS V + +
Sbjct: 149 YPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGT 208

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y+K   +  +   F   L+ +   +T+M+ GY  N    ++  +  EM  L LE 
Sbjct: 209 GLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEP 268

Query: 178 NEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR-CGQKLD 231
           N  +  ++L +      FD  + +QIH   +  G+ S   N++   ++  Y   CG   D
Sbjct: 269 NGMTYNSLLSSFSCPRHFD--KCKQIHCRIITEGYESN--NYIAVTLVTAYSECCGSLED 324

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+   I   D +SW+  IA   +   G EA   F  +R   F ++ +T  ++  ++G 
Sbjct: 325 YRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGM 384

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GKQI    YK G+   +S+ N L+SMY + G + D++ +F  +   D +SWNS+
Sbjct: 385 TSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSL 444

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++G + +G   +A+D+F  M    + P+  +  ++L A S+   L + ++ +  ++++  
Sbjct: 445 LSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLE-YFKLMRNSE 503

Query: 409 LLDDSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           L++   +   + L+  +G+   L E++  +  I  +  + I
Sbjct: 504 LVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISI 544



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 183/407 (44%), Gaps = 17/407 (4%)

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +L  G Q+ +   K+GF     I  AL+ MYGKC  ++DA  +FD +     V+WNS++ 
Sbjct: 83  LLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVT 142

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY + G+   A+ +F  ML+  + P  ++++  L   S  +      Q+H+  +K  F  
Sbjct: 143 GYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSS 202

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + + LI  Y KC  L +S+RV   +  KN     ++ S         EA+ L R + 
Sbjct: 203 NVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREML 262

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK-CGTI 529
               E NG T++ +L + +     ++ K IHC  +   Y+ + ++   ++  Y + CG++
Sbjct: 263 HLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSL 322

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           ED ++    I       WNA++ G+   G   E    F +M +     D  T+ ++  + 
Sbjct: 323 EDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAI 382

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQ------LEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
                + E +        +HGL+ +      L     +V +  R G +  +KM    M  
Sbjct: 383 GMTSALEEGK-------QIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMN- 434

Query: 644 PPDAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPDNESTYVLLS 688
             D   W SLLS C  +  G   + L    +   ++PDN S   +L+
Sbjct: 435 EHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLT 481



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 115/227 (50%)

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +     +L     P    +   +   + S  L   +QVHS IIK GF L+  + + L+  
Sbjct: 53  IQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDM 112

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           YGKC +++++ +V  E+   + V  N+L +  + A     A+ L+  +     E    + 
Sbjct: 113 YGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSL 172

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S  L  C+ +   + G  +H ++LK R+  ++ V + +IDMY KC  ++D++R F  +  
Sbjct: 173 SGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLN 232

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            ++  W +M+ GYA++   HE   L  +M    ++P+ +TY ++L+S
Sbjct: 233 KNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSS 279



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 27/191 (14%)

Query: 402 HIIKSGFLLDDS---MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           H++K   +L+ +   +ISC  T        +E   +   +   N V I  L  +L + S 
Sbjct: 13  HLLKPSSILNSNHRPLISCHYTH-------SEDVSIKPLLQTHNVVDIQFLVQLLRHGSP 65

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
               + L +TI                  C   T L+ G  +H   +K  +  + ++ +A
Sbjct: 66  PTPPI-LTKTI----------------SICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTA 108

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++DMY KC +I DA + F ++   S+  WN+++ GY Q G      +LF +M K G++P 
Sbjct: 109 LVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPT 168

Query: 579 EITYLAVLTSC 589
             +    L  C
Sbjct: 169 PFSLSGGLVGC 179


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 205/675 (30%), Positives = 338/675 (50%), Gaps = 19/675 (2%)

Query: 80  DAFTFSSLVKACGSLQENEIV-----HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           D+  + ++++ C  +++N+ V     H   LK G    ++  +  +  Y K+G    A  
Sbjct: 48  DSHAYGTMLRRC--IRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            F +  + +NV+Y  +  GY           ++  +   G ELN    T+ L     + +
Sbjct: 106 LFDEMPERNNVSYVTLTQGYACQDPVG----LYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 195 GE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
            E    +H   VK+G+ S     +  A++N Y  CG    A  +F+ I   D+V W+  +
Sbjct: 162 AEICWWLHSPIVKLGYDSNA--FVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIV 219

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +   +     ++  L   +  + F  N YT    L +  G       K +     K  + 
Sbjct: 220 SCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYE 279

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               +G  L+ +Y + G ++DA  +F+ +   D V W+ MIA + +NGF N+A+D+F  M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM 339

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            E  ++PN +T++SIL   +  K      Q+H  ++K GF LD  + + LI  Y KC  +
Sbjct: 340 REGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKM 399

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           + + ++ +E+  KN V  N +           +AL ++R    +   V   TFS  L AC
Sbjct: 400 DTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC 459

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A++  +E G  +H LA+K    + + V +++IDMY KCG I+ A+  F ++    +A WN
Sbjct: 460 ASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWN 519

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           A++ GY+ HG   +   +F+ M     KP+ +T+L VL+ C +AGL+ + +     M   
Sbjct: 520 ALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICD 579

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           HG+ P LEHY C+V L GR G L+ A   I+ +P  P   IW+++LSA     N +    
Sbjct: 580 HGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARR 639

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           +  ++L++ P +E+TYVLLSN+YA A  W +V  +RK MKEK + KEPG SWI   G  H
Sbjct: 640 SAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVH 699

Query: 729 HFYAGDSSHSQSKEI 743
            F  G S H   K I
Sbjct: 700 FFSVGSSDHPDMKLI 714



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 241/506 (47%), Gaps = 15/506 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  ++K G  LD   +  L++ + K    + A     +   R+ ++Y  L  G A  CQ
Sbjct: 71  IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYA--CQ 128

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
               + L+ RL  +G   +   F+S +K   SL + EI   +H   +KLG+ S  ++ + 
Sbjct: 129 D--PVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAA 186

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y+  G + SA   F   L  D V +  +V  YV NG F+ S ++   M   G   N
Sbjct: 187 LINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPN 246

Query: 179 EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            ++    L AS  +      + +HG  +K  +   +   +   ++ LY + G   DA K+
Sbjct: 247 NYTFDTALKASIGLGAFHFAKSVHGQILKTCY--ELDPRVGVGLLQLYTQLGDMSDAFKV 304

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+E+ + DVV WS  IA  C      +A  +F  +R      NE+T+ ++L+     +  
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCS 364

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+Q+     KVGF   V + NALI +Y KC +++ A  +F  L  K+ VSWN++I GY
Sbjct: 365 GLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGY 424

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
              G   +AL+MF   L   +     T +S L A ++  S++  +QVH   IK+      
Sbjct: 425 ENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRV 484

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           ++ + LI  Y KC  +  ++ V +E++  +    NAL S         +AL ++  + GS
Sbjct: 485 AVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGS 544

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGK 498
             + NG TF  VL  C+    ++QG+
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQ 570



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 183/364 (50%), Gaps = 19/364 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K  + LDP +   L+  +T+  D   AF+   +    D++ ++ +I   ARFCQ
Sbjct: 269 VHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI---ARFCQ 325

Query: 62  SG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
           +G    A+ +F R+R   + P+ FT SS++  C   +     E +HG+ +K+GF   VY+
Sbjct: 326 NGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYV 385

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ YAK  ++ +A   F +    + V++  ++ GY   GE  K+  +F E     +
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQV 445

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            + E + ++ LGA   +     G Q+HG  +K      V   ++N+++++Y +CG    A
Sbjct: 446 SVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVA--VSNSLIDMYAKCGDIKVA 503

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F+E+   DV SW+  I+       G +A  +F  ++ +D + N  T + +LS     
Sbjct: 504 QTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNA 563

Query: 290 RILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNS 347
            ++  G+   ++     G    +     ++ ++G+ GQ++ A ++ + + ++ SV  W +
Sbjct: 564 GLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRA 623

Query: 348 MIAG 351
           M++ 
Sbjct: 624 MLSA 627



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 22/268 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L++K G  LD  +S  LI  + K      A +   +  +++++++N +I G     
Sbjct: 369 QLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLG 428

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           + G AL +F       +     TFSS + AC SL   E+   VHG+ +K   + RV + +
Sbjct: 429 EGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSN 488

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G+I  A+  F +   +D  ++ A++ GY  +G   ++  +F  M+    + 
Sbjct: 489 SLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKP 548

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNH-------LNNAIMNLYVRCG 227
           N  +   VL    +   + +G+          F S +C+H           ++ L+ R G
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQDC--------FESMICDHGIEPCLEHYTCMVRLFGRSG 600

Query: 228 QKLDAVKMFDEIT-EPDVVSWSERIAAA 254
           Q   A+ + + I  EP V+ W   ++A+
Sbjct: 601 QLDKAMNLIEGIPYEPSVMIWRAMLSAS 628


>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 985

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 210/691 (30%), Positives = 353/691 (51%), Gaps = 19/691 (2%)

Query: 83  TFSSLVKAC---GSLQENEIVHGVCLKLGFSS---RVYLVSGFIENYAKSGEIVSAEMCF 136
           T + L+K C    SLQE   +H + L    +S     +L +  I  Y++ G +  A   F
Sbjct: 281 TDTLLLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVF 340

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFD--KSKEVFVEMRSLGLELNEFSLTAVLGASF---D 191
                  +V+Y A++  Y    E     +  ++ +M ++GL  +  ++T++L A+    D
Sbjct: 341 DKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGD 400

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +  G  +H   +K GFL+ +C  +  +++N+Y  C     A  +F ++ E D V+W+  I
Sbjct: 401 LLIGLLLHAKSLKFGFLNDIC--VQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLI 458

Query: 252 AAAC--DGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                 D +E    LF ++ +  F    YT   +LS+    +   +G+ I A        
Sbjct: 459 LGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVS 518

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + + NAL+ MY   G    A  IF  +   D VSWNSMI+GY EN    +A+++F  +
Sbjct: 519 PDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQL 578

Query: 369 LEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
                  P+ YT A I+ A            +H  +IK+GF+    + S L++ Y K   
Sbjct: 579 KALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQE 638

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
              + RV   I  K+A+    + +     +    A+  +  +     E++    S VL  
Sbjct: 639 TEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSV 698

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA +  L QG+ IHC A K  YD ++ V  ++IDMY K G +E A   F ++    L  W
Sbjct: 699 CAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCW 758

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N+M+ G++ HG   +   LF ++ K G+ PD++T+L++L++C H+ LV + +   + MS 
Sbjct: 759 NSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSS 818

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNIDLG 666
           + GL+P  +HY+C+V LL R  LLE A+  I++ P +  +  +W++LLSAC I  N+ +G
Sbjct: 819 I-GLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVG 877

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
           + A  ++L    ++  T +LLSNLYA+AG W++V ++R+ MK   + KEPG SWI     
Sbjct: 878 VRAAEEVLRFNAEDGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPGLSWIEAKND 937

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHMVAT 757
            H F +GD SH +  ++  EL +L  +M+ T
Sbjct: 938 IHVFSSGDQSHPKVDQVQAELHRLKGNMIRT 968



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 235/477 (49%), Gaps = 30/477 (6%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K G   D  + T+L++ ++   D   A     D   RD + +N+LI G  +  +    +
Sbjct: 412 LKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGV 471

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENY 123
            LF  + + G  P  +TF  ++ AC  L++     ++H   +    S  ++L +  ++ Y
Sbjct: 472 YLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMY 531

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSL 182
             +G+  +A M F      D V++ +M+ GY  N + +K+  +FV++++L   + ++++ 
Sbjct: 532 CNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTY 591

Query: 183 TAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
             ++ A+        G+ +HG  +K GF+  V   + + ++++Y +  +   A+++F  I
Sbjct: 592 AGIISATGAFPCFSYGKPLHGQVIKAGFVRSV--FVGSTLVSMYFKNQETEAALRVFCSI 649

Query: 240 TEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              D + W+E I   +   DG+ A   F ++     +I++Y +  +LS      ILR G+
Sbjct: 650 PGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGE 709

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            I  + YK+G+   +S+  +LI MY K G +  A  +F  +   D   WNSM+ G+S +G
Sbjct: 710 IIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHG 769

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
             + AL +F  +++  L+P+  T  S+L A S+S+ ++Q   + +++   G +      S
Sbjct: 770 MVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKHYS 829

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           C++T   +   L E++ +   I+K   V  N               +EL+RT+  +C
Sbjct: 830 CMVTLLSRAALLEEAEEI---INKSPYVEDN---------------VELWRTLLSAC 868



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 234/496 (47%), Gaps = 14/496 (2%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG--PALKLFDRLRY 74
           L   +IS +++      A +       R  ++YNAL++  +R  +     A  L+ ++  
Sbjct: 319 LYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMEN 378

Query: 75  QGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
            GLRP   T +SL++A    G L    ++H   LK GF + + + +  +  Y+   ++ S
Sbjct: 379 MGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSS 438

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           AE  F D  + DNVA+ +++ GY+ N + +K   +F+EM  +G     ++   +L A   
Sbjct: 439 AESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSR 498

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +K+   G  IH   V VG +S    HL NA++++Y   G    A  +F  + + D+VSW+
Sbjct: 499 LKDYFSGRLIHA-RVIVGNVSPDL-HLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWN 556

Query: 249 ERIAAAC---DGVEAFGLFKDLRFNDF-QINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
             I+      DG +A  LF  L+   F + ++YT   ++S+ G       GK +     K
Sbjct: 557 SMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIK 616

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            GF+  V +G+ L+SMY K  +   A  +F  +  KD++ W  MI GYS+      A+  
Sbjct: 617 AGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRC 676

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  M       + Y ++ +L   +    L+Q   +H +  K G+ ++ S+   LI  Y K
Sbjct: 677 FSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAK 736

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
              L  +  V S++   +    N++     +     +AL+L+  I       +  TF  +
Sbjct: 737 NGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSL 796

Query: 485 LKACAAMTDLEQGKAI 500
           L AC+    +EQGK +
Sbjct: 797 LSACSHSRLVEQGKLL 812


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 194/638 (30%), Positives = 340/638 (53%), Gaps = 28/638 (4%)

Query: 138 DCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VK 193
           D L+  N+ ++T +V  +  +G+  ++      MR  G+  +  +    LG+  D   ++
Sbjct: 16  DALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLR 75

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIA 252
           +G +IH   V       +   ++NA++N+Y +CG    A ++F ++    +V+SWS  I 
Sbjct: 76  DGIRIHQMVVDSRL--EIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWS--IM 131

Query: 253 AACDGV-----EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           A    +     EA   F+ +     +  +  M+ +LS+     +++ G+ I +     GF
Sbjct: 132 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGF 191

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMIAGYSENGFFNQALDMF 365
              + + NA+++MYG+CG V +AR +FD +    +D VSWN M++ Y  N     A+ ++
Sbjct: 192 ESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLY 251

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M    L P+  T  S+L A S+++ +     +H  I+      +  + + L++ Y KC
Sbjct: 252 QRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC 308

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW-----GSCREV--NG 478
            +  E++ V  ++++++ +    + S  V     AEA  L++ +      GS + V  + 
Sbjct: 309 GSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDA 368

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
             F  +L ACA ++ LEQGK +   A       D  V +AV+++Y KCG IE+A+R F  
Sbjct: 369 LAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDA 428

Query: 539 IC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +C R  +  WNAM+  YAQ G  HE   LF +M   GV+PD  +++++L +C H GL  +
Sbjct: 429 VCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQ 488

Query: 598 ARTYLSCMS-DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            ++Y + M+ +   +   ++H+ C+ DLLGR G L+ A+  ++++P+ PDA  W SLL+A
Sbjct: 489 GKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 548

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C  + ++       +KLL L+P   + YV LSN+YA    W+ V K+RK M E+ + KE 
Sbjct: 549 CRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKER 608

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G S I +G Y H F  GD +H +++EI +EL KL+  M
Sbjct: 609 GVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQM 646



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 264/577 (45%), Gaps = 33/577 (5%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           + +H     D + AF  L   + R++ ++  L++  A   QS   L+  +R+R  G+RPD
Sbjct: 1   MYAHCDSPGDAKAAFDAL---EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPD 57

Query: 81  AFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
           A TF + + +CG   SL++   +H + +         + +  +  Y K G +  A+  F 
Sbjct: 58  AVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 117

Query: 138 DCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VK 193
                 NV +++ M   +  +G   ++   F  M  LG++  + ++  +L A      V+
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP--DVVSWSERI 251
           +G  IH      GF S +   + NA+M +Y RCG   +A K+FD + E   DVVSW+  +
Sbjct: 178 DGRMIHSCIALSGFESELL--VANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML 235

Query: 252 AAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +       G +A  L++ ++      ++ T ++LLS+      +  G+ +          
Sbjct: 236 STYVHNDRGKDAIQLYQRMQLRP---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE 292

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
           + V +GNAL+SMY KCG   +AR++FD +  +  +SW ++I+ Y       +A  +F  M
Sbjct: 293 KNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM 352

Query: 369 LEFS-------LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           LE         + P+     +IL A ++  +L+Q   V       G   D ++ + ++  
Sbjct: 353 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 412

Query: 422 YGKCNALNESKRVLSEIDKKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGST 480
           YGKC  + E++R+   +  +  V + NA+ +V        EAL+L+  +       +  +
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 472

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARY---DQDIFVESAVIDMYCKCGTIEDAKRAFR 537
           F  +L AC+     +QGK+ +  ++   Y    + I     V D+  + G +++A+    
Sbjct: 473 FVSILLACSHTGLEDQGKS-YFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLE 531

Query: 538 KI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           K+  +     W +++     H        + NK+ + 
Sbjct: 532 KLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 568



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 147/278 (52%), Gaps = 10/278 (3%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY  C    DA++ FD L  ++  SW  ++A ++ +G   + L     M +  + P+  T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
             + L +  + +SL+  +++H  ++ S   +D  + + L+  Y KC +L+ +KRV ++++
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 440 K-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           + +N +  + +A          EAL  +R +     +   S    +L AC++   ++ G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 499 AIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI---CRDSLAGWNAMMMGY 554
            IH C+AL   ++ ++ V +AV+ MY +CG +E+A++ F  +    RD +  WN M+  Y
Sbjct: 181 MIHSCIALSG-FESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRD-VVSWNIMLSTY 238

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
             +    +   L+ +M    ++PD++TY+++L++C  A
Sbjct: 239 VHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSA 273



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT--QNRDIITYNALISGLARFCQSGPALKLFDR 71
           D  + T +++ + K  +   A R +FD      D+  +NA+I+  A+F QS  ALKLF R
Sbjct: 402 DKAVGTAVVNLYGKCGEIEEARR-IFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWR 460

Query: 72  LRYQGLRPDAFTFSSLVKAC 91
           +  +G+RPD+F+F S++ AC
Sbjct: 461 MEMEGVRPDSFSFVSILLAC 480


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 170/509 (33%), Positives = 269/509 (52%), Gaps = 32/509 (6%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T  NL+      R L  GK++       GF+  + I N ++ MY KCG + DAR +FD +
Sbjct: 89  TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEM 148

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE-----FSLIPNGY----------TMAS 382
             +D  SWN M+ GY+E G   +A ++F  M E     ++ +  GY           + S
Sbjct: 149 PERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYS 208

Query: 383 ILEAVSNSKS-----------------LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
           +++ V NSK                  +++  ++H HI+++G   D+ + S L+  YGKC
Sbjct: 209 LMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 268

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             ++E++ +  +I  K+ V   ++      +S   E   L+  + GSC   N  TFS VL
Sbjct: 269 GCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVL 328

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            ACA +T  E G+ +H    +  +D   F  S++IDMY KCG IE A+       +  L 
Sbjct: 329 NACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLV 388

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
              +++ GYAQ+G   E    F+ + K G KPD +T++ VL++C HAGLV +   +   +
Sbjct: 389 SLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 448

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           ++ H L    +HY C+VDLL R G  E  K  + +MP+ P   +W S+L  C+ YGNIDL
Sbjct: 449 TEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDL 508

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
              A  +L +++P+N  TYV ++N+YA+AG W + GK+RK M+E  + K+PG SW  +  
Sbjct: 509 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKR 568

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             H F A D+SH    +I + L +L + M
Sbjct: 569 KRHVFIAADTSHPMYNQIIEFLGELRKKM 597



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 211/438 (48%), Gaps = 27/438 (6%)

Query: 31  FRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL----KLFDRLRYQGLRPDAFTFSS 86
            R A + L   +     TY  LI    + C    AL    K+ + +R  G  P    ++ 
Sbjct: 72  LREAVQLLGRAKKPPASTYCNLI----QVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127

Query: 87  LV---KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           ++     CGSL +   V     +    S   +V+G    YA+ G +  A   F +  + D
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNG----YAEVGLLEEARNLFDEMPERD 183

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDVK---EGEQIH 199
           + ++TAMV GYV   + +++  ++  M R    + N F++++ + A+  +K    G++IH
Sbjct: 184 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIH 243

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACD 256
           G  V+ G  S     L +++M++Y +CG   +A  +FD+I + DVVSW+   +R   +  
Sbjct: 244 GHIVRAGLDSDEV--LWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSR 301

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             E F LF +L  +  + NEYT   +L++         G+Q+  +  +VGF       ++
Sbjct: 302 WREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSS 361

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI MY KCG +  AR + D     D VS  S+I GY++NG  ++AL  F  +L+    P+
Sbjct: 362 LIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPD 421

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS-MISCLITTYGKCNALNESKRVL 435
             T  ++L A +++  +++ ++    I +   L   S   +CL+    +     + K VL
Sbjct: 422 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVL 481

Query: 436 SEIDKKNAVHINALASVL 453
           SE+  K +  +   ASVL
Sbjct: 482 SEMPMKPSKFL--WASVL 497



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 206/455 (45%), Gaps = 42/455 (9%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +L  V   +  ++EG+++H      GF+ G+   + N I+ +Y +CG  +DA K+FDE+ 
Sbjct: 92  NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV--IWNRILGMYAKCGSLVDARKVFDEMP 149

Query: 241 EPDVVSWSERIAAACD-GV--EAFGLFKDL------------------------------ 267
           E DV SW+  +    + G+  EA  LF ++                              
Sbjct: 150 ERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSL 209

Query: 268 --RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
             R  + + N +T+ + +++    + +R GK+I     + G      + ++L+ MYGKCG
Sbjct: 210 MQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 269

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            +++AR+IFD +I KD VSW SMI  Y ++  + +   +F  ++     PN YT + +L 
Sbjct: 270 CIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLN 329

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A ++  + +   QVH ++ + GF       S LI  Y KC  +  ++ V+    K + V 
Sbjct: 330 ACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVS 389

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLA 504
           + +L           EAL+ +  +  S  + +  TF  VL AC     +E+G +  + + 
Sbjct: 390 LTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 449

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEV 563
            K          + ++D+  + G  E  K    ++  + S   W +++ G + +G     
Sbjct: 450 EKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLA 509

Query: 564 SNLFNKMSKFGVKPD-EITYLAVLTSCCHAGLVRE 597
                ++  F ++P+  +TY+ +      AG   E
Sbjct: 510 EEAAQEL--FKIEPENPVTYVTMANIYAAAGKWEE 542



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/469 (20%), Positives = 188/469 (40%), Gaps = 90/469 (19%)

Query: 358 FNQALDMFC---------HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           F +A+D+ C          +L  +  P   T  ++++  S +++L++  +VH HI  SGF
Sbjct: 59  FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 118

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           +    + + ++  Y KC +L ++++V  E+ +++    N    V+V        LE  R 
Sbjct: 119 VPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWN----VMVNGYAEVGLLEEARN 174

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQ-------------------------------- 496
           ++    E +  +++ ++         E+                                
Sbjct: 175 LFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIK 234

Query: 497 ----GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
               GK IH   ++A  D D  + S+++DMY KCG I++A+  F KI    +  W +M+ 
Sbjct: 235 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMID 294

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            Y +   + E  +LF+++     +P+E T+  VL +C         R     M+ + G  
Sbjct: 295 RYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRV-GFD 353

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP---------------------------- 644
           P     + ++D+  + G +E A+  +D  P P                            
Sbjct: 354 PYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLL 413

Query: 645 ------PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST--YVLLSNLYASAGM 696
                 PD   + ++LSACT  G ++ GL     + E      ++  Y  L +L A +G 
Sbjct: 414 LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGR 473

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           +  +  +  EM      K   + W  V G    +   D +   ++E++K
Sbjct: 474 FEQLKSVLSEMP----MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK 518



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 21/368 (5%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRL-RYQGLRPDAFTFSSLVKACGS 93
           R LFD    RD  ++ A+++G  +  Q   AL L+  + R    +P+ FT SS V A  +
Sbjct: 173 RNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAA 232

Query: 94  LQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
           ++     + +HG  ++ G  S   L S  ++ Y K G I  A   F   +D D V++T+M
Sbjct: 233 IKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSM 292

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF 207
           +  Y  +  + +   +F E+       NE++ + VL A  D+     G Q+HG+  +VGF
Sbjct: 293 IDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGF 352

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF 264
                +  +++++++Y +CG    A  + D   +PD+VS +  I   A +G   EA   F
Sbjct: 353 --DPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYF 410

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGK 323
             L  +  + +  T +N+LS+     ++  G +   +   K            L+ +  +
Sbjct: 411 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLAR 470

Query: 324 CGQVNDARSIFDYLIFKDS-VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG----Y 378
            G+    +S+   +  K S   W S++ G S  G  + A +    +  F + P       
Sbjct: 471 SGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL--FKIEPENPVTYV 528

Query: 379 TMASILEA 386
           TMA+I  A
Sbjct: 529 TMANIYAA 536



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 5/192 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +I+  +++ G   D +L ++L+  + K      A R +FD   ++D++++ ++I    + 
Sbjct: 241 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEA-RNIFDKIIDKDVVSWTSMIDRYFKS 299

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +      LF  L     RP+ +TFS ++ AC  L   E+   VHG   ++GF    +  
Sbjct: 300 SRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFAS 359

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I+ Y K G I SA      C   D V+ T+++ GY  NG+ D++ + F  +   G +
Sbjct: 360 SSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTK 419

Query: 177 LNEFSLTAVLGA 188
            +  +   VL A
Sbjct: 420 PDHVTFVNVLSA 431



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + + G       S++LI  +TK  +   A   +      D+++  +LI G A+  
Sbjct: 342 QVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNG 401

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   ALK FD L   G +PD  TF +++ AC
Sbjct: 402 KPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 432


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 186/540 (34%), Positives = 302/540 (55%), Gaps = 13/540 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQ 273
           N +++ Y +      A ++FDE+ +PD VS++  IAA     D   AF LF ++R     
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 274 INEYTMINLLSSVGGERILRAG--KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           ++ +T+  ++++ G    +  G  +Q+ A     G    VS+GNALI+ Y K G + +AR
Sbjct: 138 MDGFTLSGIITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEAR 193

Query: 332 SIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            IF +L   +D VSWNSM+  Y ++   ++AL+++  M    LI + +T+AS+L A +N 
Sbjct: 194 RIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNV 253

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINAL 449
           + L   +Q H+ +IKSG+  +  + S LI  Y KC   + + ++V  EI   + V  N +
Sbjct: 254 QDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTM 313

Query: 450 AS-VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            S   +Y     EALE +R + G     +  +   V+ AC+ M+   QG+ +H LALK  
Sbjct: 314 ISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLD 373

Query: 509 YDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
              + I V +A+I MY KCG + DAK  F  +   +   +N+M+ GYAQHG   +  +LF
Sbjct: 374 IPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLF 433

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M +    P  IT+++VL +C H G V + + Y + M    G+ P+  H++C++DLLGR
Sbjct: 434 QRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGR 493

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L  A+  I+ +P  P    W +LL AC I+GN++L + A ++LL+L P N + YV+L
Sbjct: 494 AGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVML 553

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+Y+  G   D   +RK M+++ + K+PG SWI V    H F A D+ H   K+I + L
Sbjct: 554 ANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYL 613



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 234/433 (54%), Gaps = 16/433 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            TLIS + K +    A +   +    D ++YN LI+  AR   + PA +LF  +R   L 
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 79  PDAFTFSSLVKACG-SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            D FT S ++ ACG ++     +H + +  G  S V + +  I +Y+K+G +  A   F 
Sbjct: 138 MDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFH 197

Query: 138 -DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
               D D V++ +MV  Y+ + E  K+ E+++EM   GL ++ F+L +VL A  +V++  
Sbjct: 198 WLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLL 257

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ-KLDAVKMFDEITEPDVVSWSERIA 252
            G Q H   +K G+     +H+ + +++LY +CG   LD  K+FDEI+ PD+V W+  I+
Sbjct: 258 GGLQFHAKLIKSGYHQN--SHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315

Query: 253 AAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                     EA   F+ L+    + ++ +++ ++S+         G+Q+     K+   
Sbjct: 316 GYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIP 375

Query: 309 -EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              +S+ NALI+MY KCG + DA+++FD +   ++VS+NSMIAGY+++G   Q+L +F  
Sbjct: 376 SNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKC 425
           MLE    P   T  S+L A +++  ++   +++ +++K  F ++      SC+I   G+ 
Sbjct: 436 MLEMDFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRA 494

Query: 426 NALNESKRVLSEI 438
             L+E++R++  I
Sbjct: 495 GKLSEAERLIETI 507



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 234/521 (44%), Gaps = 48/521 (9%)

Query: 83  TFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGF-------------------- 119
           +F   +K C     L+  + +H + +K    +  YL + F                    
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 120 -----------IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
                      I  YAK   +  A   F +    D+V+Y  ++  Y   G+   + ++F+
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 169 EMRSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           EMR   L+++ F+L+ ++ A   +V    Q+H   V  G  S V   + NA++  Y + G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVS--VGNALITSYSKNG 187

Query: 228 QKLDAVKMFDEITEP-DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLL 283
              +A ++F  ++E  D VSW+  + A     +G +A  L+ ++      ++ +T+ ++L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ-VNDARSIFDYLIFKDS 342
           ++    + L  G Q  A   K G+ +   +G+ LI +Y KCG  + D R +FD +   D 
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 343 VSWNSMIAGYS-ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           V WN+MI+GYS      ++AL+ F  +      P+  ++  ++ A SN  S  Q  QVH 
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367

Query: 402 HIIKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             +K     +  S+ + LI  Y KC  L ++K +   + + N V  N++ +         
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY--DQDIFVESA 518
           ++L L++ +          TF  VL ACA    +E GK I+   +K ++  + +    S 
Sbjct: 428 QSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSC 486

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDS-LAGWNAMMMGYAQHG 558
           +ID+  + G + +A+R    I  D     W+A++     HG
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHG 527



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 213/481 (44%), Gaps = 60/481 (12%)

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           ++    L +    R LR GK + A   K        + N  + +Y KC +++ AR +FD+
Sbjct: 9   HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 337 L----IF---------------------------KDSVSWNSMIAGYSENGFFNQALDMF 365
                +F                            DSVS+N++IA Y+  G    A  +F
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M E  L  +G+T++ I+ A   +  L +  Q+H+  + +G     S+ + LIT+Y K 
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITSYSKN 186

Query: 426 NALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
             L E++R+   + + ++ V  N++    +     ++ALELY  +      V+  T + V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDS 543
           L A   + DL  G   H   +K+ Y Q+  V S +ID+Y KC G + D ++ F +I    
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306

Query: 544 LAGWNAMMMGYAQHGCYHEVSN----LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
           L  WN M+ GY+    Y ++S+     F ++   G +PD+ + + V+++C +     + R
Sbjct: 307 LVLWNTMISGYS---LYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGR 363

Query: 600 TYLSCMSDLHGLIPQLEHYA-------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
                   +HGL  +L+  +        ++ +  + G L  AK   D MP   +   + S
Sbjct: 364 -------QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNS 415

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQ--PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           +++    +G     L    ++LE+   P N  T++ +    A  G   D       MK+K
Sbjct: 416 MIAGYAQHGMGFQSLHLFQRMLEMDFTPTN-ITFISVLAACAHTGRVEDGKIYFNMMKQK 474

Query: 711 F 711
           F
Sbjct: 475 F 475



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 25/270 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q ++ LIK+G+H +  + + LI  ++K        R +FD   N D++ +N +ISG + +
Sbjct: 261 QFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLY 320

Query: 60  CQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGF-SSRVY 114
              S  AL+ F +L+  G RPD  +   ++ AC ++    +   VHG+ LKL   S+R+ 
Sbjct: 321 EDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRIS 380

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y+K G +  A+  F    + + V+Y +M+ GY  +G   +S  +F  M  + 
Sbjct: 381 VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMD 440

Query: 175 LELNEFSLTAVLGA---SFDVKEG-------EQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
                 +  +VL A   +  V++G       +Q  G   + G  S         +++L  
Sbjct: 441 FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS--------CMIDLLG 492

Query: 225 RCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
           R G+  +A ++ + I  +P    WS  + A
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFXWSALLGA 522


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 173/486 (35%), Positives = 272/486 (55%), Gaps = 4/486 (0%)

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           LR  D    +Y  +  L+    +R +R G+++ A   K  ++  V +   LI  Y KC  
Sbjct: 51  LRGLDTNFQDYNTV--LNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDS 108

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           + DAR +FD +  ++ VSW +MI+ YS+ G+ +QAL +F  ML     PN +T A++L +
Sbjct: 109 LRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTS 168

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
              S       Q+HSHIIK  +     + S L+  Y K   ++E++ +   + +++ V  
Sbjct: 169 CIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSC 228

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
            A+ S         EALEL+R +     + N  T++ VL A + +  L+ GK +H   L+
Sbjct: 229 TAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLR 288

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
           +     + +++++IDMY KCG +  A+R F  +   ++  WNAM++GY++HG   EV  L
Sbjct: 289 SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLEL 348

Query: 567 FNKM-SKFGVKPDEITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEHYACIVDL 624
           FN M  +  VKPD +T LAVL+ C H GL  +    +    S    + P  +HY C+VD+
Sbjct: 349 FNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDM 408

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR G +E A   + +MP  P A IW  LL AC+++ N+D+G   G +LL+++P+N   Y
Sbjct: 409 LGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNY 468

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           V+LSNLYASAG W DV  LR  M +K + KEPG SWI +    H F+A D SH + +E+ 
Sbjct: 469 VILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVS 528

Query: 745 KELIKL 750
            ++ +L
Sbjct: 529 AKVQEL 534



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 194/407 (47%), Gaps = 18/407 (4%)

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           +E  + M   GL+ N      VL        ++EG+++H   +K  +L   C +L   ++
Sbjct: 43  REALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLP--CVYLRTRLI 100

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEY 277
             YV+C    DA  +FD + E +VVSW+  I+A        +A  LF  +  +  + NE+
Sbjct: 101 VFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEF 160

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T   +L+S  G      G+QI +   K+ +   V +G++L+ MY K G++++AR IF  L
Sbjct: 161 TFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCL 220

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D VS  ++I+GY++ G   +AL++F  +    +  N  T  S+L A+S   +L    
Sbjct: 221 PERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGK 280

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           QVH+H+++S       + + LI  Y KC  L  ++R+   + ++  +  NA+   LV  S
Sbjct: 281 QVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAM---LVGYS 337

Query: 458 CHAEA---LELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQ 511
            H E    LEL+  +    + + +  T   VL  C+     ++G  I     + K     
Sbjct: 338 KHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQP 397

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQH 557
           D      V+DM  + G +E A    +K+    S A W  ++   + H
Sbjct: 398 DSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVH 444



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 173/336 (51%), Gaps = 14/336 (4%)

Query: 75  QGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +GL  +   +++++  C    +++E + VH   +K  +   VYL +  I  Y K   +  
Sbjct: 52  RGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRD 111

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS----LTAVLG 187
           A   F    + + V++TAM+  Y   G   ++  +FV+M   G E NEF+    LT+ +G
Sbjct: 112 ARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIG 171

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           +S  V  G QIH   +K+ + + V  ++ ++++++Y + G+  +A  +F  + E DVVS 
Sbjct: 172 SSGFVL-GRQIHSHIIKLNYEAHV--YVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSC 228

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I+         EA  LF+ L+    Q N  T  ++L+++ G   L  GKQ+     +
Sbjct: 229 TAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLR 288

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
                 V + N+LI MY KCG +  AR IFD L  +  +SWN+M+ GYS++G   + L++
Sbjct: 289 SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLEL 348

Query: 365 FCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           F  M+ E  + P+  T+ ++L   S+     + M +
Sbjct: 349 FNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDI 384



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 167/358 (46%), Gaps = 40/358 (11%)

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           +   HM    L  N     ++L      +++++  +VH+H+IK+ +L    + + LI  Y
Sbjct: 44  EALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFY 103

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC++L +++ V   + ++N V   A+ S        ++AL L+  +  S  E N  TF+
Sbjct: 104 VKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFA 163

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            VL +C   +    G+ IH   +K  Y+  ++V S+++DMY K G I +A+  F+ +   
Sbjct: 164 TVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPER 223

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-----------CH 591
            +    A++ GYAQ G   E   LF ++ + G++ + +TY +VLT+             H
Sbjct: 224 DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVH 283

Query: 592 AGLVR-EARTYL---SCMSDLHGLIPQLEHYACIVDLL--------------------GR 627
             L+R E  +Y+   + + D++     L +   I D L                    GR
Sbjct: 284 NHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGR 343

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL----LAGSKLLELQPDNE 681
             +LE   + ID+  + PD+    ++LS C+  G  D G+       S  + +QPD++
Sbjct: 344 -EVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSK 400



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 177/368 (48%), Gaps = 19/368 (5%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLAR 58
           ++++ +IK  H+L  + L T LI  + K    R A R +FD    R+++++ A+IS  ++
Sbjct: 79  RVHAHMIKT-HYLPCVYLRTRLIVFYVKCDSLRDA-RHVFDVMPERNVVSWTAMISAYSQ 136

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
              +  AL LF ++   G  P+ FTF++++ +C           +H   +KL + + VY+
Sbjct: 137 RGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYV 196

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  ++ YAK G+I  A   F+   + D V+ TA++ GY   G  +++ E+F  ++  G+
Sbjct: 197 GSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + N  + T+VL A      +  G+Q+H   ++    S V   L N+++++Y +CG    A
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVV--LQNSLIDMYSKCGNLTYA 314

Query: 233 VKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFK-DLRFNDFQINEYTMINLLSSVGG 288
            ++FD + E  V+SW+  +       +G E   LF   +  N  + +  T++ +LS    
Sbjct: 315 RRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSH 374

Query: 289 ERILRAGKQI--QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-W 345
             +   G  I       K+           ++ M G+ G+V  A      + F+ S + W
Sbjct: 375 GGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIW 434

Query: 346 NSMIAGYS 353
             ++   S
Sbjct: 435 GCLLGACS 442


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 194/685 (28%), Positives = 356/685 (51%), Gaps = 15/685 (2%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C S      +H  CLK G     ++V+     YA+   I  A   F++        
Sbjct: 145 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYL 204

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMR-----SLGLELNEFSLTAVLGASFDVKE---GEQI 198
           + A++  Y + GE+ ++  +F +M      S+    + +S++  L +   +++   G+ I
Sbjct: 205 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 264

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---AC 255
           HGF  KV     +   + +A+++LY +CGQ  DAVK+F E  +PDVV W+  I+    + 
Sbjct: 265 HGFLKKVRIDGDM--FVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 322

Query: 256 DGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               A   F  +  ++    +  T++++ S+       + G+ +  F  + G    + + 
Sbjct: 323 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLA 382

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N+L+ +YGK G + +A ++F  +  KD +SW++M+A Y++NG     LD+F  ML+  + 
Sbjct: 383 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 442

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN  T+ S+L A +   +L++ M++H   +  GF ++ ++ + L+  Y KC +  ++  +
Sbjct: 443 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDL 502

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
            + + KK+ +    L S         E++ ++R +  S    +      +L   + +  L
Sbjct: 503 FNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGIL 562

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           +Q   +H   +K  ++ + F+ +++I++Y KC +IEDA + F+ +    +  W++++  Y
Sbjct: 563 QQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAY 622

Query: 555 AQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
             HG   E   LF +M+     KP+ +T++++L++C H+GL++E       M + + L P
Sbjct: 623 GFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKP 682

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EHYA +VDLLGR+G L+ A   I+ MP+     IW +LL AC I+ NI +G +A   L
Sbjct: 683 NSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNL 742

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
             L P++   Y+LLSN+Y+    W+   KLR+ +KEK L K  G S + +      F AG
Sbjct: 743 FSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAG 802

Query: 734 DSSHSQSKEIYKELIKLYEHMVATA 758
           D  H +S  IY+ L KL+  M   A
Sbjct: 803 DRIHDESDHIYEILTKLHAKMREVA 827



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 251/516 (48%), Gaps = 24/516 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S  +K G   D  + T L   + ++A    A +   +T +R +  +NAL   L  +C
Sbjct: 157 QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNAL---LRSYC 213

Query: 61  QSGPALKLFDRLRYQG--------LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF 109
             G  ++     R            RPD ++ S  +K+C  L++    +++HG   K+  
Sbjct: 214 FEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRI 273

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
              +++ S  I+ Y K G++  A   F +    D V +T+++ GY  +G  + +   F  
Sbjct: 274 DGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSR 333

Query: 170 M-RSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           M  S  +  +  +L +V  A   +   K G  +HGF  + G  + +C  L N++++LY +
Sbjct: 334 MVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLC--LANSLLHLYGK 391

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
            G   +A  +F E+++ D++SWS  +A   D     +   LF ++     + N  T++++
Sbjct: 392 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 451

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           L +      L  G +I       GF    ++  AL+ MY KC     A  +F+ +  KD 
Sbjct: 452 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 511

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           ++W  + +GY++NG  ++++ +F +ML     P+   +  IL  +S    L+QA+ +H+ 
Sbjct: 512 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAF 571

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           +IK+GF  +  + + LI  Y KC+++ ++ +V   +  K+ V  +++ +   +     EA
Sbjct: 572 VIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEA 631

Query: 463 LEL-YRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           L+L Y+    S  + N  TF  +L AC+    +++G
Sbjct: 632 LKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEG 667



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 203/414 (49%), Gaps = 24/414 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + + LI  +TK      A +   +    D++ + ++ISG  +      AL  F R+ 
Sbjct: 276 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 335

Query: 74  Y-QGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
             + + PD  T  S+  AC  L   ++   VHG   + G  +++ L +  +  Y K+G I
Sbjct: 336 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 395

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
            +A   FR+  D D ++++ MV  Y  NG      ++F EM    ++ N  ++ +VL A 
Sbjct: 396 KNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRAC 455

Query: 190 F---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
               +++EG +IH   V  GF   +   ++ A+M++Y++C     AV +F+ + + DV++
Sbjct: 456 ACISNLEEGMKIHELAVNYGF--EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIA 513

Query: 247 WSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+   +   D     E+  +F+++  +  + +   ++ +L+++    IL+    + AF  
Sbjct: 514 WAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVI 573

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K GF     IG +LI +Y KC  + DA  +F  + +KD V+W+S+IA Y  +G   +AL 
Sbjct: 574 KNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALK 633

Query: 364 MFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
           +F  M   S   PN  T  SIL A S           HS +IK G  + D M++
Sbjct: 634 LFYQMANHSDTKPNNVTFISILSACS-----------HSGLIKEGINMFDIMVN 676



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 13/255 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+ L +  G  ++  +ST L+  + K     +A         +D+I +  L SG A   
Sbjct: 466 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNG 525

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               ++ +F  +   G RPDA     +   +   G LQ+   +H   +K GF +  ++ +
Sbjct: 526 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGA 585

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LE 176
             IE YAK   I  A   F+     D V +++++  Y ++G+ +++ ++F +M +    +
Sbjct: 586 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTK 645

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM-NLYVRCGQ---K 229
            N  +  ++L A   S  +KEG  I+ F + V       N  + AIM +L  R G+    
Sbjct: 646 PNNVTFISILSACSHSGLIKEG--INMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMA 703

Query: 230 LDAVKMFDEITEPDV 244
           LD +        PD+
Sbjct: 704 LDVINNMPMQAGPDI 718


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 169/466 (36%), Positives = 268/466 (57%), Gaps = 6/466 (1%)

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G++I  +    G +  V +G A+ISMYGKCG+++DAR+ F+ L +K+SV+WN+M+  Y  
Sbjct: 50  GREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKL 109

Query: 355 NGFFNQALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +G   +AL++F  M E S    P+ ++ +  +EA SN + L+Q  ++H  + + G  L  
Sbjct: 110 DGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHK 169

Query: 413 SMI--SCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTI 469
            ++  + L+  Y KC  L E+++V   I    ++V  NA+ +         +AL+LYR++
Sbjct: 170 DVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSM 229

Query: 470 WGSCR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
             +        TF  V+  CA ++ L+QG+AIH       +D ++ V +A++ MY KCG 
Sbjct: 230 HDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGC 289

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +++A   F  +       WN ++  YA HG   +   L+ +M   GVKP E+T++ +L++
Sbjct: 290 LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSA 349

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GLV +   Y   M D H + P + H+ CI+DLLGR G L  A++ +  MPI  +A 
Sbjct: 350 CSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAV 409

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W SLL AC  +G++  G+ A  ++++  P     YVLLSN+YA+AG W DV K+RK M 
Sbjct: 410 QWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMA 469

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + + K PG SWI +G   H F +GD SH Q +EIY EL K+ E M
Sbjct: 470 ARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEM 515



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 190/426 (44%), Gaps = 31/426 (7%)

Query: 56  LARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLV-----KACGSLQENEIVHGVCLKL 107
           +A F  +G    AL  F R+   G RPD  TFS ++         ++ +   +H      
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           G    V + +  I  Y K G +  A   F +    ++V + AM+  Y  +G   ++ E+F
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 168 VEM--RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            EM  RS     ++FS +  + A     D+++G +IH    + G        +  A++N+
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 223 YVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAACD---GVEAFGLFKDLR-FNDFQINEY 277
           Y +CG   +A K+FD I  + D V W+  IAA      G +A  L++ +    D    + 
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T + ++        L+ G+ I A      F   + + NAL+ MYGKCG +++A  +F  +
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             KD +SWN++I+ Y+ +G  +QAL ++  M    + P   T   +L A S+   +   +
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 398 QV-----HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
                    H IK           C+I   G+   L E++ VL    K   +  NA+  +
Sbjct: 361 DYFYRMQDDHRIKPSV----PHFGCIIDLLGRGGRLAEAELVL----KSMPIQANAVQWM 412

Query: 453 LVYASC 458
            +  +C
Sbjct: 413 SLLGAC 418



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVL--KACAAMTDLEQGKAIHCLALKARYDQDIFV 515
           CH+EAL  +R ++ S    +  TFS++L   A      ++QG+ IH  A  +    ++ V
Sbjct: 9   CHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVV 68

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--F 573
            +AVI MY KCG ++DA+ AF ++   +   WNAMM  Y   G   E   LF +M +   
Sbjct: 69  GTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSR 128

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCM----SDLHGLIPQLEHYACIVDLLGRVG 629
             +PD+ ++   + +C +   + + R     +     +LH     +     ++++  + G
Sbjct: 129 SARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELH---KDVVVGTALLNMYSKCG 185

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
            LE A+   D +    D+  W ++++A   +G 
Sbjct: 186 DLEEARKVFDSIRHDADSVCWNAMIAAYAQHGR 218



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 91/428 (21%), Positives = 191/428 (44%), Gaps = 39/428 (9%)

Query: 16  ILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           ++ T +IS + K     D R AF  L   Q ++ +T+NA+++      +   AL+LF  +
Sbjct: 67  VVGTAVISMYGKCGRLDDARAAFEEL---QWKNSVTWNAMMTNYKLDGRDREALELFREM 123

Query: 73  --RYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG--FSSRVYLVSGFIENYAK 125
             R +  RPD F+FS  ++AC +L++ E    +H +  + G      V + +  +  Y+K
Sbjct: 124 CERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSK 183

Query: 126 SGEIVSAEMCFRDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLT 183
            G++  A   F     D D+V + AM+  Y  +G   ++ +++  M  +  L   + +  
Sbjct: 184 CGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFV 243

Query: 184 AVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            V+    ++   K+G  IH       F + +   ++NA++++Y +CG   +A+ +F  + 
Sbjct: 244 TVIDVCAELSALKQGRAIHARVRATNFDANLL--VSNALVHMYGKCGCLDEALDVFHSMK 301

Query: 241 EPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             D +SW+  I++        +A  L++++     +  E T + LLS+     ++  G  
Sbjct: 302 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD 361

Query: 298 IQAFCYKVG----FMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGY 352
              + Y++         V     +I + G+ G++ +A  +   + I  ++V W S++   
Sbjct: 362 ---YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGAC 418

Query: 353 SENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
             +G   + +     +++        + L+ N Y  A   + V   + +  A  V     
Sbjct: 419 KTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPG 478

Query: 405 KSGFLLDD 412
           KS   + D
Sbjct: 479 KSWIEIGD 486



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 9/196 (4%)

Query: 1   QIYSLLIKNGH--HLDPILSTTLISHFTKFADFRRAFRFLFDT--QNRDIITYNALISGL 56
           +I+ +L + G   H D ++ T L++ ++K  D   A R +FD+   + D + +NA+I+  
Sbjct: 155 EIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEA-RKVFDSIRHDADSVCWNAMIAAY 213

Query: 57  ARFCQSGPALKLFDRLR-YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSR 112
           A+  +   AL L+  +     L P   TF +++  C    +L++   +H       F + 
Sbjct: 214 AQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDAN 273

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           + + +  +  Y K G +  A   F      D +++  ++  Y ++G  D++  ++ EM  
Sbjct: 274 LLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDL 333

Query: 173 LGLELNEFSLTAVLGA 188
            G++  E +   +L A
Sbjct: 334 QGVKPTEVTFVGLLSA 349



 Score = 39.3 bits (90), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 10/117 (8%)

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV-----REARTYLSCM 605
           M  ++ +GC+ E    F +M + G +PD +T+  +L +    G       RE   Y    
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRY---- 56

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + + GL+P +     ++ + G+ G L+ A+   +++    ++  W ++++   + G 
Sbjct: 57  ARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQW-KNSVTWNAMMTNYKLDGR 112


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 184/547 (33%), Positives = 299/547 (54%), Gaps = 14/547 (2%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFND 271
           L N ++N+Y +CG    A +MFDE+ E ++VSW+  ++         E F +F+ +    
Sbjct: 102 LTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH 161

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK-CGQVNDA 330
            Q  E+   +++S+ GG+     G+Q+ A   K  F   V +GNALI MY K CG  ++A
Sbjct: 162 -QPTEFAFASVISACGGDD--NCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEA 218

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN- 389
            ++++ + F++ VSWNSMIAG+   G  N+AL++F  M    +  +  T+ SI   +   
Sbjct: 219 WNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGM 278

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINA 448
              L+   Q+    IK+GF+L   + + L+  Y      +++  R+  E+D +  V ++ 
Sbjct: 279 GDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDV-VSW 337

Query: 449 LASVLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
              +  +A    + AL ++R     C   +   FSIVLKACA +        +    LK 
Sbjct: 338 TGIIAAFAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKV 397

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            ++ DI + +A+I    +CG++  +K+ F K+       WN+M+  YA HG   E   LF
Sbjct: 398 GFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLF 457

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           ++M     +PD  T++A+L++C HAG+  E       MS+ HG++PQL+HYAC+VD+LGR
Sbjct: 458 SQMD---AQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGR 514

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G +  AK  ID+MP+ PD+ +W +LL +C  +G   L  LA  KL EL P+N   YVL+
Sbjct: 515 AGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLM 574

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN++ + G +N+   +R+EM+ K + KEPG SWI VG   H F +G   H + + I   L
Sbjct: 575 SNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARL 634

Query: 748 IKLYEHM 754
            +L   +
Sbjct: 635 EELVRRL 641



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 259/557 (46%), Gaps = 43/557 (7%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLRPDAF-- 82
           F+ F R F     + N + I    L+  +   C  G    ALKLF    Y    P     
Sbjct: 9   FSGFFRGFSTTGVSLNSEAIN---LLHHIRLLCSRGHLQEALKLF----YSITPPPPLVH 61

Query: 83  ---TFSSLVKACG---SLQENEIVHGVCLKLGFSS--RVYLVSGFIENYAKSGEIVSAEM 134
              T+++L +AC    SL E + +H        +S   ++L +  +  YAK G +  A  
Sbjct: 62  SHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQ 121

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL--ELNEFSLTAVLGA-SFD 191
            F +  + + V++TA+V GY  +G   +S E F   R + +  +  EF+  +V+ A   D
Sbjct: 122 MFDEMPEKNIVSWTALVSGYAQHG---RSNECFRVFRGMLIWHQPTEFAFASVISACGGD 178

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR-CGQKLDAVKMFDEITEPDVVSWSER 250
              G Q+H   +K  F S  C ++ NA++ +Y + CG   +A  +++ +   ++VSW+  
Sbjct: 179 DNCGRQVHALALKTSFDS--CVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSM 236

Query: 251 IAA--ACD-GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG-ERILRAGKQIQAFCYKVG 306
           IA    C  G  A  LF  +     + +  T++++ S + G    L    Q+Q    K G
Sbjct: 237 IAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTG 296

Query: 307 FMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFK-DSVSWNSMIAGYSENGFFNQALDM 364
           F+  + +  AL+  Y    G+V+D   IF  L  + D VSW  +IA ++E     +AL +
Sbjct: 297 FILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKKALVI 355

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F   L   L P+ +  + +L+A +   + + A+ V SH++K GF  D  + + LI    +
Sbjct: 356 FRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACAR 415

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C ++  SK+V  ++  ++ V  N++           EAL L+  +     + +G+TF  +
Sbjct: 416 CGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA---QPDGATFVAL 472

Query: 485 LKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--R 541
           L AC+     E+G K    ++        +   + ++D+  + G I +AK    K+    
Sbjct: 473 LSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEP 532

Query: 542 DSLAGWNAMMMGYAQHG 558
           DS+  W+A++    +HG
Sbjct: 533 DSVV-WSALLGSCRKHG 548



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 76/132 (57%), Gaps = 4/132 (3%)

Query: 461 EALELYRTIWGSCREVNGS-TFSIVLKACAAMTDLEQGKAIH--CLALKARYDQDIFVES 517
           EAL+L+ +I      V+   T++ + +ACA  + L +G+A+H          D ++F+ +
Sbjct: 45  EALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTN 104

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            V++MY KCG+++ A + F ++   ++  W A++ GYAQHG  +E   +F  M  +  +P
Sbjct: 105 HVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWH-QP 163

Query: 578 DEITYLAVLTSC 589
            E  + +V+++C
Sbjct: 164 TEFAFASVISAC 175


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 185/557 (33%), Positives = 303/557 (54%), Gaps = 48/557 (8%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+ + W+      A + D V A  L+  +       N +T   LL S   
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  + G+QI     K+GF   + +  +LISMY + G++ DA+ +FD             
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TMA+++ A + S S++   QVHS I   GF  +  +++ LI  Y KC  +  +  +L  
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327

Query: 498 KAIHCLALKARYDQDIF----VESAVIDMYCKCGTIEDAKR-----AFRKICRDSLAGWN 548
           + IH    K      +     + +++IDMY KCG I+ A +     AF +    SL+ WN
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNR----SLSTWN 383

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           AM+ G+A HG  +   ++F++M K G++PD+IT++ +L++C H+G++   R     M   
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQD 443

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           + + P+LEHY C++DLLG  GL + A+  I+ MP+ PD  IW SLL AC I+GN++LG  
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 503

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE-PGYSWIHVGGYT 727
              KL++++P+N  +YVLLSN+YA+AG WN+V K+R  + +K + K+ PG S I +    
Sbjct: 504 FAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVV 563

Query: 728 HHFYAGDSSHSQSKEIY 744
           H F  GD  H Q++EIY
Sbjct: 564 HEFIIGDKLHPQNREIY 580



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 226/498 (45%), Gaps = 80/498 (16%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGV 103
           + +N +  G A       ALKL+  +   GL P+ FTF  L+K+C    + +E + +HG 
Sbjct: 41  LIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGH 100

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV-------- 155
            LKLGF   +Y+ +  I  YA++G +  A+  F      D V+YTA++ GY         
Sbjct: 101 VLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESA 160

Query: 156 --------------WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---S 189
                         WN         G + K+ E+F EM    ++ +E ++  V+ A   S
Sbjct: 161 QKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQS 220

Query: 190 FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++ G Q+H +    GF S +   + NA+++LY +CG+   A ++ + ++  DV+SW+ 
Sbjct: 221 GSIELGRQVHSWINDHGFGSNL--KIVNALIDLYSKCGEVETACELLEGLSNKDVISWNT 278

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-- 304
            I          EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K  
Sbjct: 279 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL 338

Query: 305 --VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENGFFNQA 361
             V      S+  +LI MY KCG ++ A  + D   F  S+S WN+MI G++ +G  N A
Sbjct: 339 KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAA 398

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
            D+F  M +  + P+  T   +L A S+S  L     +  +I +S  +  D  I+  +  
Sbjct: 399 FDIFSRMRKNGIEPDDITFVGLLSACSHSGML----DLGRNIFRS--MRQDYNITPKLEH 452

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           YG                         +  +L ++    EA E+  T+     E +G  +
Sbjct: 453 YG------------------------CMIDLLGHSGLFKEAEEMINTM---PMEPDGVIW 485

Query: 482 SIVLKACAAMTDLEQGKA 499
             +LKAC    +LE G++
Sbjct: 486 CSLLKACKIHGNLELGES 503



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 44/407 (10%)

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDV 192
           F    + + + +  M  G+  + +   + +++V M SLGL  N F+   +L +   S   
Sbjct: 32  FETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTF 91

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK------------------ 234
           KEG+QIHG  +K+GF   +  +++ +++++Y + G+  DA K                  
Sbjct: 92  KEGQQIHGHVLKLGFDLDL--YVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALIT 149

Query: 235 -------------MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYT 278
                        MFDEI   DVVSW+  I+   +     +A  LFK++   + + +E T
Sbjct: 150 GYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDEST 209

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           M  ++S+      +  G+Q+ ++    GF   + I NALI +Y KCG+V  A  + + L 
Sbjct: 210 MATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLS 269

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            KD +SWN++I GY+    + +AL +F  ML     PN  TM SIL A ++  ++     
Sbjct: 270 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 329

Query: 399 VHSHIIK--SGFLLDD--SMISCLITTYGKCNALNESKRVL-SEIDKKNAVHINALASVL 453
           +H +I K   G ++ +  S+ + LI  Y KC  ++ + +V  S    ++    NA+    
Sbjct: 330 IHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGF 389

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
                   A +++  +  +  E +  TF  +L AC+    L+ G+ I
Sbjct: 390 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H D +  T LI+ +        A +   +   +D++++NA+ISG A       AL+LF  
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +    ++PD  T +++V AC   GS++    VH      GF S + +V+  I+ Y+K GE
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + +A        + D +++  ++ GY     + ++  +F EM   G   N+ ++ ++L A
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317

Query: 189 -----SFDVKEGEQIHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT- 240
                + D+  G  IH +  K   G +    + L  +++++Y +CG  +DA     + + 
Sbjct: 318 CAHLGAIDI--GRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGD-IDAAPQVSDSSA 374

Query: 241 -EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
               + +W+  I   A       AF +F  +R N  + ++ T + LLS+     +L  G+
Sbjct: 375 FNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434

Query: 297 QI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
            I ++          +     +I + G  G   +A  + + +  + D V W S++
Sbjct: 435 NIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLL 489


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 191/614 (31%), Positives = 324/614 (52%), Gaps = 12/614 (1%)

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIH 199
           + V++ +++  +V NG    +  +F  M   G   ++F+L + + A     DV  G Q+H
Sbjct: 99  NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVH 158

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG- 257
              +K    S +   + NA++ +Y + G   D   +F+ I + D++SW   IA  A  G 
Sbjct: 159 AHALKSERGSDLI--VQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGF 216

Query: 258 -VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
            +EA  +F+++        NE+   +   + G       G+QI     K      + +G 
Sbjct: 217 EMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGC 276

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           +L  MY +C  ++ AR  F  +   D VSWNS++  YS  G  ++AL +F  M +  L P
Sbjct: 277 SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 336

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +G T+  +L A     +L     +HS+++K G   D S+ + L++ Y +C+ L+ +  V 
Sbjct: 337 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 396

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            EI  ++ V  N++ +     +   E L+L+  +  S   ++  + + VL A A +   E
Sbjct: 397 HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFE 456

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMG 553
             K +H  A KA    D  + + +ID Y KCG+++DA R F  +   RD  + W+++++G
Sbjct: 457 MVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS-WSSLIVG 515

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           YAQ G   E  +LF++M   G++P+ +T++ VLT+C   G V E   Y S M   +G++P
Sbjct: 516 YAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVP 575

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EH +CIVDLL R G L  A   IDQMP  PD  +W++LL+A  ++ ++++G  A   +
Sbjct: 576 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 635

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           L + P + + YVLL N+YA++G WN+  +L+K M+   + K PG SW+ + G    F   
Sbjct: 636 LNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVE 695

Query: 734 DSSHSQSKEIYKEL 747
           D SH +S+EIY  L
Sbjct: 696 DRSHPESEEIYAML 709



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 218/451 (48%), Gaps = 16/451 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K+    D I+   L++ ++K       F      +++D+I++ ++I+G A+  
Sbjct: 156 QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQG 215

Query: 61  QSGPALKLFDRLRYQGL-RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
               AL++F  +  +G   P+ F F S  +AC   GS +  E +HG+ +K      +Y+ 
Sbjct: 216 FEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG 275

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
               + YA+   + SA + F      D V++ ++V  Y   G   ++  +F EMR  GL 
Sbjct: 276 CSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 335

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  ++  +L A      +  G  IH + VK+G    V   + N+++++Y RC     A+
Sbjct: 336 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVS--VCNSLLSMYARCSDLSSAM 393

Query: 234 KMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            +F EI + DVV+W+  I  AC       E   LF  L  ++  ++  ++ N+LS+    
Sbjct: 394 DVFHEIKDQDVVTWNS-ILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 452

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSM 348
                 KQ+ A+ +K G ++   + N LI  Y KCG ++DA  +F+ +   +D  SW+S+
Sbjct: 453 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 512

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSG 407
           I GY++ G+  +A D+F  M    + PN  T   +L A S    + +    +S +  + G
Sbjct: 513 IVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 572

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +      SC++    +   L E+   + ++
Sbjct: 573 IVPTREHCSCIVDLLARAGKLTEAANFIDQM 603



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 252/511 (49%), Gaps = 22/511 (4%)

Query: 38  LFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSL 94
           L     R+ +++ ++I+   +  ++G AL LF  +   G   D F   S V+AC   G +
Sbjct: 92  LITMYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDV 151

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
                VH   LK    S + + +  +  Y+K+G +    M F    D D +++ +++ G+
Sbjct: 152 GTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGF 211

Query: 155 VWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSG 210
              G   ++ +VF EM   G    NEF   +     GA    + GEQIHG  +K      
Sbjct: 212 AQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRD 271

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKM-FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKD 266
           +  ++  ++ ++Y RC + LD+ ++ F  I  PD+VSW+  + A + +G+  EA  LF +
Sbjct: 272 L--YVGCSLSDMYARC-KNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 328

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +R +  + +  T+  LL +  G   L  G+ I ++  K+G    VS+ N+L+SMY +C  
Sbjct: 329 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 388

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++ A  +F  +  +D V+WNS++   +++    + L +F  + +     +  ++ ++L A
Sbjct: 389 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 448

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKRVLSEIDKKNAVH 445
            +     +   QVH++  K+G L+DD M+S  LI TY KC +L+++ R+  EI   N   
Sbjct: 449 SAELGYFEMVKQVHAYAFKAG-LVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDV 506

Query: 446 INALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
            +  + ++ YA      EA +L+  +       N  TF  VL AC+ +  + +G   + +
Sbjct: 507 FSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSI 566

Query: 504 ALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
            ++  Y      E  S ++D+  + G + +A
Sbjct: 567 -MEPEYGIVPTREHCSCIVDLLARAGKLTEA 596



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L IK     D  +  +L   + +  +   A    +  +  D++++N++++  +   
Sbjct: 258 QIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEG 317

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  +R  GLRPD  T   L+ AC    +L    ++H   +KLG    V + +
Sbjct: 318 LLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 377

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+  ++ SA   F +  D D V + +++     +   ++  ++F  +      L
Sbjct: 378 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 437

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL  VL AS ++   E   Q+H +  K G +      L+N +++ Y +CG   DA++
Sbjct: 438 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD--RMLSNTLIDTYAKCGSLDDAMR 495

Query: 235 MFDEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F+ +    DV SWS  I          EAF LF  +R    + N  T I +L++     
Sbjct: 496 LFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVG 555

Query: 291 ILRAGKQIQAFCYKVGFME----VVSIG---NALISMYGKCGQVNDARSIFDYLIFK-DS 342
            +  G      CY    ME    +V      + ++ +  + G++ +A +  D + F+ D 
Sbjct: 556 FVNEG------CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDI 609

Query: 343 VSWNSMIAG 351
           + W +++A 
Sbjct: 610 IMWKTLLAA 618



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 33/273 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S L+K G   D  +  +L+S + + +D   A     + +++D++T+N++++  A+   
Sbjct: 360 IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH 419

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
               LKLF  L       D  + ++++ A   L   E+   VH    K G      L + 
Sbjct: 420 PEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT 479

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G +  A   F    +  +V ++++++ GY   G   ++ ++F  MRSLG+  
Sbjct: 480 LIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRP 539

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN---------------NAIMNL 222
           N  +   VL A               +VGF++  C + +               + I++L
Sbjct: 540 NHVTFIGVLTAC-------------SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDL 586

Query: 223 YVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAA 254
             R G+  +A    D++  EPD++ W   +AA+
Sbjct: 587 LARAGKLTEAANFIDQMPFEPDIIMWKTLLAAS 619


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 186/540 (34%), Positives = 302/540 (55%), Gaps = 13/540 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQ 273
           N +++ Y +      A ++FDE+ +PD VS++  IAA     D   AF LF ++R     
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 274 INEYTMINLLSSVGGERILRAG--KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           ++ +T+  ++++ G    +  G  +Q+ A     G    VS+GNALI+ Y K G + +AR
Sbjct: 138 MDGFTLSGIITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEAR 193

Query: 332 SIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            IF +L   +D VSWNSM+  Y ++   ++AL+++  M    LI + +T+AS+L A +N 
Sbjct: 194 RIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNV 253

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINAL 449
           + L   +Q H+ +IKSG+  +  + S LI  Y KC   + + ++V  EI   + V  N +
Sbjct: 254 QDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTM 313

Query: 450 AS-VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            S   +Y     EALE +R +       +  +   V+ AC+ M+   QG+ +H LALK  
Sbjct: 314 ISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLD 373

Query: 509 YDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
              + I V +A+I MY KCG + DAK  F  +   +   +N+M+ GYAQHG   +  +LF
Sbjct: 374 IPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLF 433

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M + G  P  IT+++VL +C H G V + + Y + M    G+ P+  H++C++DLLGR
Sbjct: 434 QRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGR 493

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L  A+  I+ +P  P    W +LL AC I+GN++L + A ++LL+L P N + YV+L
Sbjct: 494 AGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVML 553

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+Y+  G   D   +RK M+++ + K+PG SWI V    H F A D+ H   K+I + L
Sbjct: 554 ANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYL 613



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 234/433 (54%), Gaps = 16/433 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            TLIS + K +    A +   +    D ++YN LI+  AR   + PA +LF  +R   L 
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 79  PDAFTFSSLVKACG-SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            D FT S ++ ACG ++     +H + +  G  S V + +  I +Y+K+G +  A   F 
Sbjct: 138 MDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFH 197

Query: 138 -DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
               D D V++ +MV  Y+ + E  K+ E+++EM   GL ++ F+L +VL A  +V++  
Sbjct: 198 WLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLL 257

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ-KLDAVKMFDEITEPDVVSWSERIA 252
            G Q H   +K G+     +H+ + +++LY +CG   LD  K+FDEI+ PD+V W+  I+
Sbjct: 258 GGLQFHAKLIKSGYHQN--SHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315

Query: 253 AAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                     EA   F+ L+    + ++ +++ ++S+         G+Q+     K+   
Sbjct: 316 GYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIP 375

Query: 309 -EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              +S+ NALI+MY KCG + DA+++FD +   ++VS+NSMIAGY+++G   Q+L +F  
Sbjct: 376 SNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKC 425
           MLE    P   T  S+L A +++  ++   +++ +++K  F ++      SC+I   G+ 
Sbjct: 436 MLEMGFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRA 494

Query: 426 NALNESKRVLSEI 438
             L+E++R++  I
Sbjct: 495 GKLSEAERLIETI 507



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 233/521 (44%), Gaps = 48/521 (9%)

Query: 83  TFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGF-------------------- 119
            F   +K C     L+  + +H + +K    +  YL + F                    
Sbjct: 10  NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 120 -----------IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
                      I  YAK   +  A   F +    D+V+Y  ++  Y   G+   + ++F+
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 169 EMRSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           EMR   L+++ F+L+ ++ A   +V    Q+H   V  G  S V   + NA++  Y + G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVS--VGNALITSYSKNG 187

Query: 228 QKLDAVKMFDEITEP-DVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLL 283
              +A ++F  ++E  D VSW+  + A     +G +A  L+ ++      ++ +T+ ++L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ-VNDARSIFDYLIFKDS 342
           ++    + L  G Q  A   K G+ +   +G+ LI +Y KCG  + D R +FD +   D 
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 343 VSWNSMIAGYS-ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           V WN+MI+GYS      ++AL+ F  +      P+  ++  ++ A SN  S  Q  QVH 
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367

Query: 402 HIIKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             +K     +  S+ + LI  Y KC  L ++K +   + + N V  N++ +         
Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGF 427

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY--DQDIFVESA 518
           ++L L++ +          TF  VL ACA    +E GK I+   +K ++  + +    S 
Sbjct: 428 QSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQKFGIEPEAGHFSC 486

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDS-LAGWNAMMMGYAQHG 558
           +ID+  + G + +A+R    I  D     W+A++     HG
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHG 527



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 183/406 (45%), Gaps = 56/406 (13%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--- 337
             L +    R LR GK + A   K        + N  + +Y KC +++ AR +FD+    
Sbjct: 13  QFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDC 72

Query: 338 -IF---------------------------KDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            +F                            DSVS+N++IA Y+  G    A  +F  M 
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR 132

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  L  +G+T++ I+ A   +  L +  Q+H+  + +G     S+ + LIT+Y K   L 
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 430 ESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           E++R+   + + ++ V  N++    +     ++ALELY  +      V+  T + VL A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGW 547
             + DL  G   H   +K+ Y Q+  V S +ID+Y KC G + D ++ F +I    L  W
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLW 310

Query: 548 NAMMMGYAQHGCYHEVSN----LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           N M+ GY+    Y ++S+     F ++   G +PD+ + + V+++C +     + R    
Sbjct: 311 NTMISGYS---LYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGR---- 363

Query: 604 CMSDLHGLIPQLEHYA-------CIVDLLGRVGLLEGAKMTIDQMP 642
               +HGL  +L+  +        ++ +  + G L  AK   D MP
Sbjct: 364 ---QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 25/270 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q ++ LIK+G+H +  + + LI  ++K        R +FD   N D++ +N +ISG + +
Sbjct: 261 QFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLY 320

Query: 60  CQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGF-SSRVY 114
              S  AL+ F +L+  G RPD  +   ++ AC ++    +   VHG+ LKL   S+R+ 
Sbjct: 321 EDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRIS 380

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y+K G +  A+  F    + + V+Y +M+ GY  +G   +S  +F  M  +G
Sbjct: 381 VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMG 440

Query: 175 LELNEFSLTAVLGA---SFDVKEG-------EQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
                 +  +VL A   +  V++G       +Q  G   + G  S         +++L  
Sbjct: 441 FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS--------CMIDLLG 492

Query: 225 RCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
           R G+  +A ++ + I  +P    WS  + A
Sbjct: 493 RAGKLSEAERLIETIPFDPGFFFWSALLGA 522



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 4/119 (3%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
            F   LK C A  DL  GK++H L +K+      ++ +  + +Y KC  +  A+R F   
Sbjct: 10  NFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
              ++  +N ++  YA+         LF++M     +PD ++Y  ++ +    G  + A
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPA 124


>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
          Length = 591

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 173/527 (32%), Positives = 288/527 (54%), Gaps = 4/527 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-LRFNDFQIN 275
           N+++++Y RCG++ DA ++FDE+   D VSW+  IAA+    +A  LF+  LR +    +
Sbjct: 61  NSLVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRMLRSDARACD 120

Query: 276 EYTMINLLS--SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             T   +LS  +  G   L A   +       GF   V +GNAL++ Y +CG    A  +
Sbjct: 121 RATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERV 180

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  K+ ++W +MI+G +    + ++  +F  M+  ++  N  T +  L A + S + 
Sbjct: 181 FHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIR-TVDANNATYSCALLACARSLAA 239

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           ++  QVH  ++K+GF  D  + S L+  Y KC  + ++  V     + + V +  +    
Sbjct: 240 REGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGF 299

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  +A EL+  + G+  E++ +T S VL A  A      GK IH L +K  +  + 
Sbjct: 300 AQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNT 359

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V + +++MY KCG + ++ R F ++   +   WN+++  +A+HG   EV  LF  M   
Sbjct: 360 YVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKAD 419

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G KP ++T+L++L +C H G  ++    L+ MS  +G++P++EHYAC+VD+LGR GLL+ 
Sbjct: 420 GAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDD 479

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           AK  I+  P   +A +WQ+L+ AC+ +GN ++G  A  KLL L P   + YVLLSN+Y+S
Sbjct: 480 AKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSS 539

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
            G W+D  K+ K M E  L K+ G SWI +    H F    +SH  S
Sbjct: 540 EGRWDDRAKVMKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTSHPNS 586



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 226/459 (49%), Gaps = 28/459 (6%)

Query: 2   IYSLLIKNGHHLD-----PILS------TTLISHFTKFADFRRAFRFLFDTQNRDIITYN 50
           +++ ++KN  H       P L        +L+S + +      A R   + + RD +++N
Sbjct: 33  LHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRREDAARVFDEMRVRDAVSWN 92

Query: 51  ALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACG-----SLQENEIVHGVC 104
           +LI+       +G AL LF R LR      D  TF++++  C      SL    +VHG+ 
Sbjct: 93  SLIAASR---GAGDALALFRRMLRSDARACDRATFTTVLSECARAGAASLPACAMVHGLV 149

Query: 105 LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
           +  GF + V + +  +  Y + G   SAE  F    + + + +TAM+ G      + +S 
Sbjct: 150 VSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKESF 209

Query: 165 EVFVEM-RSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            +F +M R++      +S   +  A S   +EG+Q+HG  VK GF   +  H+ + +M++
Sbjct: 210 SLFGQMIRTVDANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDL--HVESGLMDV 267

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTM 279
           Y +CG   DA+ +F    EPD V  +  +   A +G+E  AF LF ++     +I+E T+
Sbjct: 268 YSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTV 327

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
             +L + G       GKQI A   K  F     + N L++MY KCG++ ++  +FD +  
Sbjct: 328 SAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPS 387

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+SVSWNS+IA ++ +G  ++   +F  M      P   T  S+L A S+  S K+ +++
Sbjct: 388 KNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEI 447

Query: 400 -HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            +S   + G L      +C++   G+   L+++K  + +
Sbjct: 448 LNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIED 486



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 192/366 (52%), Gaps = 14/366 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L++  G   +  +   L++ + +      A R       +++IT+ A+ISG+AR   
Sbjct: 145 VHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAEL 204

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              +  LF ++  + +  +  T+S  + AC    + +E + VHG+ +K GF   +++ SG
Sbjct: 205 YKESFSLFGQM-IRTVDANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDLHVESG 263

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+K G +  A   FR C + D V  T ++ G+  NG  +K+ E+F EM   G E++
Sbjct: 264 LMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEID 323

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E +++AVL   GAS     G+QIH   +K  F  GV  ++ N ++N+Y +CG+  ++V++
Sbjct: 324 ENTVSAVLGAFGASAPFALGKQIHALVIKRCF--GVNTYVCNGLVNMYSKCGELRESVRV 381

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FDE+   + VSW+  IAA      G E + LF+ ++ +  +  + T ++LL +       
Sbjct: 382 FDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSA 441

Query: 293 RAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIA 350
           + G +I  +   + G +  +     ++ M G+ G ++DA+S  +   F D ++ W +++ 
Sbjct: 442 KKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMG 501

Query: 351 GYSENG 356
             S +G
Sbjct: 502 ACSFHG 507



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 86/169 (50%), Gaps = 7/169 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L+IK    ++  +   L++ ++K  + R + R   +  +++ +++N++I+  AR  
Sbjct: 345 QIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHG 404

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRVYLV 116
                 +LF+ ++  G +P   TF SL+ AC   GS ++  EI++ +  + G   R+   
Sbjct: 405 HGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHY 464

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMV--CGYVWNGEFDK 162
           +  ++   ++G +  A+    D    DN + + A++  C +  N E  K
Sbjct: 465 ACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGK 513


>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 180/534 (33%), Positives = 295/534 (55%), Gaps = 11/534 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
           G Q+H   +K+GF   +  ++  A++++Y +C    DA K+FDE++ P VV+W+  +   
Sbjct: 87  GIQVHSTIIKLGF--SLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGY 144

Query: 254 --ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA--GKQIQAFCYKVGFME 309
             A   + A  LF ++     +   +++   L  VG  ++ +   G Q+ A   K+ F  
Sbjct: 145 LQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGL--VGCSQLQKGDLGSQLHAMSLKLRFSS 202

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V +G  LI MY KC  + D+R +FD ++ K+  +W SMI+GY+ N   ++A+ +   ML
Sbjct: 203 NVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREML 262

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NAL 428
             +L PNG T  S+L + S  +   +  Q+H  II  G+  ++ +   L+T Y +C  +L
Sbjct: 263 HLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSL 322

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            + ++V S I   + +  NA+ +         EALE +  +     +V+  TF+ + KA 
Sbjct: 323 EDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAI 382

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
              + LE+GK IH L  K  Y  ++ V++ ++ MY + G I D+K  F  +    L  WN
Sbjct: 383 GMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWN 442

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ G A HGC  E  +LF KM +  +KPD  ++LAVLT+C H GL+ +   Y   M + 
Sbjct: 443 SLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNS 502

Query: 609 HGL-IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             +  P+LEHYA +VDL GR G L  A+  I+ +PI P   I+++LLSAC I+GN D+ +
Sbjct: 503 ELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAI 562

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
               KLLEL P + +TY++LSN     G W+D   +R+ M  + + KEPG+SW+
Sbjct: 563 RTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 228/461 (49%), Gaps = 20/461 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +IK G  L+P + T L+  + K      A +   +     ++T+N+L++G  +  
Sbjct: 89  QVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAG 148

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A+ LF  +  +G+ P  F+ S  +  C  LQ+ ++   +H + LKL FSS V + +
Sbjct: 149 YPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGT 208

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y+K   +  +   F   L+ +   +T+M+ GY  N    ++  +  EM  L L+ 
Sbjct: 209 GLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKP 268

Query: 178 NEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR-CGQKLD 231
           N  +  ++L +      FD  + +QIH   +  G+ S   N++   ++  Y   CG   D
Sbjct: 269 NGMTYNSLLSSFSCPRHFD--KCKQIHCRIITEGYESN--NYIAVTLVTAYSECCGSLED 324

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+   I   D +SW+  IA   +   G EA   F  +R   F ++ +T  ++  ++G 
Sbjct: 325 YRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGM 384

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GKQI    YK G+   +S+ N L+SMY + G + D++ +F  +   D +SWNS+
Sbjct: 385 TSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSL 444

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++G + +G   +A+D+F  M    + P+  +  ++L A S+   L + ++ +  ++++  
Sbjct: 445 LSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLE-YFKLMRNSE 503

Query: 409 LLDDSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           L++   +   + L+  +G+   L E++  +  I  +  + I
Sbjct: 504 LVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISI 544



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 183/407 (44%), Gaps = 17/407 (4%)

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +L  G Q+ +   K+GF     I  AL+ MYGKC  ++DA  +FD +     V+WNS++ 
Sbjct: 83  LLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVT 142

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY + G+   A+ +F  ML+  + P  ++++  L   S  +      Q+H+  +K  F  
Sbjct: 143 GYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSS 202

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  + + LI  Y KC  L +S+RV   +  KN     ++ S         EA+ L R + 
Sbjct: 203 NVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREML 262

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK-CGTI 529
               + NG T++ +L + +     ++ K IHC  +   Y+ + ++   ++  Y + CG++
Sbjct: 263 HLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSL 322

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           ED ++    I       WNA++ G+   G   E    F +M +     D  T+ ++  + 
Sbjct: 323 EDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAI 382

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQ------LEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
                + E +        +HGL+ +      L     +V +  R G +  +KM    M  
Sbjct: 383 GMTSALEEGK-------QIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMN- 434

Query: 644 PPDAHIWQSLLSACTIY--GNIDLGLLAGSKLLELQPDNESTYVLLS 688
             D   W SLLS C  +  G   + L    +   ++PDN S   +L+
Sbjct: 435 EHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLT 481



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 115/227 (50%)

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           +     +L     P    +   +   + S  L   +QVHS IIK GF L+  + + L+  
Sbjct: 53  IQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDM 112

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           YGKC +++++ +V  E+   + V  N+L +  + A     A+ L+  +     E    + 
Sbjct: 113 YGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSL 172

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S  L  C+ +   + G  +H ++LK R+  ++ V + +IDMY KC  ++D++R F  +  
Sbjct: 173 SGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLN 232

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            ++  W +M+ GYA++   HE   L  +M    +KP+ +TY ++L+S
Sbjct: 233 KNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSS 279



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 27/191 (14%)

Query: 402 HIIKSGFLLDDS---MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           H++K   +L+ +   +ISC  T        +E   +   +   N V I  L  +L + S 
Sbjct: 13  HLLKPSSILNSNHRPLISCHYTH-------SEDVSIKPLLQTHNVVDIQFLVQLLRHGSP 65

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
               + L +TI                  C   T L+ G  +H   +K  +  + ++ +A
Sbjct: 66  PTPPI-LTKTI----------------SICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTA 108

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++DMY KC +I DA + F ++   S+  WN+++ GY Q G      +LF +M K G++P 
Sbjct: 109 LVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPT 168

Query: 579 EITYLAVLTSC 589
             +    L  C
Sbjct: 169 PFSLSGGLVGC 179


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 222/746 (29%), Positives = 387/746 (51%), Gaps = 36/746 (4%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLR-PDAF 82
           +F++F+   R             + LIS +     SG    AL+L+  +R  G +  D +
Sbjct: 2   RFSNFQAGLRL------------SDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTW 49

Query: 83  TFSSLVKACGSLQEN--EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
              S++KAC +   N    +HG  +K G  S   + +  I+ Y K G++ SA+  F    
Sbjct: 50  VLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTK 109

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQ 197
           + D+V++  MV G   NG        F++ R    + N  SL  V+ A  ++K   +G  
Sbjct: 110 NKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFA 169

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAAC- 255
            HG+  + GF S + + + N++++LY        A K+F E++   DVVSWS  I     
Sbjct: 170 FHGYIFRSGF-SAILS-VQNSLLSLYAEVHMYF-AYKLFGEMSVRNDVVSWSVMIGGFVQ 226

Query: 256 --DGVEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
             +  + F +F+++        +  T++++L +    + +  G  +       G  + + 
Sbjct: 227 IGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLF 286

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +GN+LI MY KC  V+ A   F  +  K+ +SWN M++ Y  N    +AL +   M+   
Sbjct: 287 VGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREG 346

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
              +  T+A++L+   +     +   VH  II+ G+  ++ +++ +I  Y KCN +  ++
Sbjct: 347 AEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELAR 406

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI--VLKACAA 490
            V   ++KK+ V  + + +         EA+ +++ +     EV  +  SI  +++ACA 
Sbjct: 407 MVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM---NEEVIPNNVSIMNLMEACAV 463

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
             +L Q K  H +A++     ++ + +++IDMY KCG IE + RAF +I + ++  W+AM
Sbjct: 464 SAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAM 523

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           +  +  +G  HE   LF K+ + G KP+ +T L++L++C H GL+ E  ++ + M   HG
Sbjct: 524 ISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHG 583

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP--IPPDAHIWQSLLSACTIYGNIDLGLL 668
           + P LEHY+CIVD+L R G    A   I+++P  +   A IW +LLS+C  YGNI LG  
Sbjct: 584 IEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSG 643

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           A S++L+L+P + + Y+L SNLYA+ G+  D  K+R+  KEK +    GYS +H+   T 
Sbjct: 644 AASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTW 703

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHM 754
            F AGD  + ++ EIY  + KL+  M
Sbjct: 704 RFVAGDVLNPRADEIYLMVKKLHGVM 729



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 271/578 (46%), Gaps = 31/578 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  LIK G      ++ + I  + K+ D   A R    T+N+D +++N ++ G      
Sbjct: 69  MHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGS 128

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVYL 115
               L  F + R+   +P+    SSL+    + +E +I       HG   + GFS+ + +
Sbjct: 129 IMAGLCWFIKGRFAHFQPN---ISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSV 185

Query: 116 VSGFIENYAKSGEIVS----AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            +  +  YA+     +     EM  R+    D V+++ M+ G+V  GE ++   +F  M 
Sbjct: 186 QNSLLSLYAEVHMYFAYKLFGEMSVRN----DVVSWSVMIGGFVQIGEDEQGFLMFRNMV 241

Query: 172 S-LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           +  G+  +  ++ +VL A  ++K+   G  +HG  +  G    +   + N+++++Y +C 
Sbjct: 242 TEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDL--FVGNSLIDMYSKCF 299

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLS 284
               A K F EI E +++SW+  ++A       +EA  L   +     + +E T+ N+L 
Sbjct: 300 NVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQ 359

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                      + +     + G+     + N++I  Y KC  V  AR +FD +  KD V+
Sbjct: 360 IAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVA 419

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W++MIAG++ NG  ++A+ +F  M E  +IPN  ++ +++EA + S  L+Q+   H   +
Sbjct: 420 WSTMIAGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAV 478

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G   + ++ + +I  Y KC  +  S R  ++I +KN V  +A+ S         EAL 
Sbjct: 479 RRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALM 538

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC-LALKARYDQDIFVESAVIDMY 523
           L+  I  +  + N  T   +L AC+    +E+G +    +  K   +  +   S ++DM 
Sbjct: 539 LFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDML 598

Query: 524 CKCGTIEDAKRAFRKICRDSLAG---WNAMMMGYAQHG 558
            + G   +A     K+ ++  AG   W  ++     +G
Sbjct: 599 SRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYG 636



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 40/239 (16%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + + ++ G   +  + T++I  ++K  D   + R       ++++ ++A+IS       +
Sbjct: 474 HGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLA 533

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF--- 119
             AL LF++++  G +P+A T  SL+ AC         HG  ++ G S    +V      
Sbjct: 534 HEALMLFEKIKQNGTKPNAVTALSLLSACS--------HGGLIEEGLSFFTSMVQKHGIE 585

Query: 120 --IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG-YVWNGEFDKSKEVFVEMRSLGLE 176
             +E+Y+   +++S    F + L+L       M  G  +W         +    RS G  
Sbjct: 586 PGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWG-------TLLSSCRSYG-- 636

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
               SL +  GA+  V + E +   G  +               NLY  CG  +D+ KM
Sbjct: 637 --NISLGS--GAASRVLQLEPLSSAGYMLA-------------SNLYANCGLMIDSAKM 678


>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
 gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 192/592 (32%), Positives = 312/592 (52%), Gaps = 13/592 (2%)

Query: 170 MRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M   G + NE +   +L A  D+ +   GEQIHGF +K GF   V   +  +++++Y R 
Sbjct: 1   MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENV--FVGTSLISMYSRS 58

Query: 227 GQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
           G   +A K+F+ +   D+   +  I     A     A G+F  L       N+YT  N++
Sbjct: 59  GNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNII 118

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S+   E     GKQ+     K G +   S+GNA+I+MYGK G V +A  +F  +  K+ +
Sbjct: 119 STCNVEE----GKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLI 174

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW ++I+GY+ NG+  +A+D F  +    +  +   +A+IL+  S  K+L    Q+H  +
Sbjct: 175 SWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLV 234

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA-LASVLVYASCHAEA 462
           IK G+  D ++ + LI  Y KC     ++ V + +  ++    NA L   +   S   + 
Sbjct: 235 IKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDP 294

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           +     +  +  + +  +FS +L   A    L +G+ +H  ++K  +   I V +A+I M
Sbjct: 295 MVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITM 354

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG +EDA +AF  +  +    WNA++  Y+ HG   +   L+ +M + G  PDEIT 
Sbjct: 355 YAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITI 414

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           L +L +C ++GL  +     + M   +G+ P LEHYAC+VDLLGR G L  A   I++ P
Sbjct: 415 LVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSP 474

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
                 +W++L++ C + G+++LG LA   LL+L PD   +YVL+SN+YA  GM ++  K
Sbjct: 475 FSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASK 534

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +R  MK+  L KE G SW+ +    H+F A  + H +S EIY  L  L   M
Sbjct: 535 VRTTMKDLKLSKEAGSSWVEIDNMVHYFVASGTDHPESIEIYARLDLLRNEM 586



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 198/397 (49%), Gaps = 10/397 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK+G   +  + T+LIS +++  +F  A +       +D+   N +I    +  
Sbjct: 31  QIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAG 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               A+ +F  L   GL P+ +TF++++  C +++E + +HG+ +K G   +  + +  I
Sbjct: 91  YEKRAIGVFIYLISVGLDPNDYTFTNIISTC-NVEEGKQLHGLAVKYGVLLQTSVGNAVI 149

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K+G +  A   F      + +++TA++ GY  NG  +K+ + F+E+R  G+E +  
Sbjct: 150 TMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSG 209

Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
            L  +L    + K    G QIHG  +K+G+   +  ++  A+++LY +C     A  +F+
Sbjct: 210 LLATILDGCSECKNLDLGTQIHGLVIKLGYPCDI--NIGTALIDLYAKCKNFQSARTVFN 267

Query: 238 EITEPDVVSWSERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            ++     S++  +    +      +       LR    + +  +   LLS       L 
Sbjct: 268 GLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLV 327

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+ + A+  K GF   +S+ NALI+MY KCG V DA   F+ +   D +SWN++I+ YS
Sbjct: 328 KGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYS 387

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            +G   +AL ++  M E    P+  T+  IL+A + S
Sbjct: 388 LHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYS 424



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 255/538 (47%), Gaps = 27/538 (5%)

Query: 87  LVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR--DCLD 141
           +++AC   G +   E +HG  +K GF   V++ +  I  Y++SG    AE  F    C D
Sbjct: 16  ILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKD 75

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGF 201
           L       M+  Y   G   ++  VF+ + S+GL+ N+++ T ++ ++ +V+EG+Q+HG 
Sbjct: 76  LR--CLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNII-STCNVEEGKQLHGL 132

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GV 258
            VK G L  +   + NA++ +Y + G   +A +MF  + + +++SW+  I+       G 
Sbjct: 133 AVKYGVL--LQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGE 190

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           +A   F +LR    + +   +  +L      + L  G QI     K+G+   ++IG ALI
Sbjct: 191 KAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALI 250

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNG 377
            +Y KC     AR++F+ L  + + S+N+++ G+ EN    +   +F   L  + I P+ 
Sbjct: 251 DLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDS 310

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            + + +L   +N  SL +   +H++ IK+GF    S+ + LIT Y KC  + ++ +  + 
Sbjct: 311 VSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNS 370

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +   + +  NA+ S         +AL LY+ +       +  T  ++L+AC      E G
Sbjct: 371 MSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSEDG 430

Query: 498 KAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAF-RKICRDSLAGWNAMMMG 553
             +H    ++++Y     +E  + ++D+  + G +  A     R    +S   W  ++  
Sbjct: 431 --LHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNV 488

Query: 554 YAQHGCYHEVSNLFNKMSK--FGVKPDEI-TYLAVLTSCCHAGLVREARTYLSCMSDL 608
               G      NL    SK    + PDE  +Y+ V       G++ EA    + M DL
Sbjct: 489 CKLCGDL----NLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTMKDL 542


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/644 (29%), Positives = 355/644 (55%), Gaps = 13/644 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y KSG + +A   F   +    V +T ++ GY  +  F ++  +F +M   G+  + 
Sbjct: 80  IMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDH 139

Query: 180 FSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVK 234
            +L  +L     F+ V E  Q+HG  VKVG+ S   VCN    ++++ Y +      A  
Sbjct: 140 ITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCN----SLLDSYCKTRSLGLACH 195

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D V+++  +   + +G   +A  LF  ++   F+ +E+T   +L++      
Sbjct: 196 LFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD 255

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ +F  K  F+  V + NAL+  Y K  ++ +AR +F  +   D +S+N +I  
Sbjct: 256 IEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITC 315

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            + NG   ++L++F  +         +  A++L   +NS +L+   Q+HS  I +  + +
Sbjct: 316 CAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISE 375

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KC+   E+ R+ +++  +++V   AL S  V    H + L+L+  +  
Sbjct: 376 VLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHR 435

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +    + +T++ +L+ACA +  L  GK +H   +++    ++F  SA++DMY KCG+I++
Sbjct: 436 AKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKE 495

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A + F+++   +   WNA++  YAQ+G        F +M   G++P+ +++L++L +C H
Sbjct: 496 ALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSH 555

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            GLV E   Y + M+ ++ L P+ EHYA +VD+L R G  + A+  + +MP  PD  +W 
Sbjct: 556 CGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWS 615

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           S+L++C I+ N +L + A  +L  ++   + + YV +SN+YA+AG W+ VGK++K ++E+
Sbjct: 616 SILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRER 675

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + K P YSW+ +   TH F A D+SH Q+KEI ++L +L + M
Sbjct: 676 GIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQM 719



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/593 (27%), Positives = 284/593 (47%), Gaps = 56/593 (9%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFD 70
           H + I + T+I  + K  +   A R LFD+   R ++T+  LI G A+  +   A  LF 
Sbjct: 70  HKNVISTNTMIMGYLKSGNLSTA-RSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFA 128

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQE-NEI--VHGVCLKLGFSSRVYLVSGFIENYAKSG 127
            +   G+ PD  T ++L+      +  NE+  VHG  +K+G+ S + + +  +++Y K+ 
Sbjct: 129 DMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTR 188

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            +  A   F+   + DNV + A++ GY   G    +  +F +M+ LG   +EF+  AVL 
Sbjct: 189 SLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLT 248

Query: 188 ASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A     D++ G+Q+H F VK  F+  V   + NA+++ Y +  + ++A K+F E+ E D 
Sbjct: 249 AGIQMDDIEFGQQVHSFVVKCNFVWNV--FVANALLDFYSKHDRIVEARKLFYEMPEVDG 306

Query: 245 VSWSERIA-AACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           +S++  I   A +G   E+  LF++L+F  F   ++    LLS       L  G+QI + 
Sbjct: 307 ISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQ 366

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
                 +  V +GN+L+ MY KC +  +A  IF  L  + SV W ++I+GY + G     
Sbjct: 367 AIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDG 426

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L +F  M    +  +  T ASIL A +N  SL    Q+HS II+SG L +    S L+  
Sbjct: 427 LKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDM 486

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC ++ E+ ++  E+  +N+V  NAL S          AL  +  +  S  + N  +F
Sbjct: 487 YAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSF 546

Query: 482 SIVLKACAAMTDLEQG-----KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
             +L AC+    +E+G            L+ R +      ++++DM C+ G  ++A++  
Sbjct: 547 LSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREH----YASMVDMLCRSGRFDEAEKL- 601

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                                            M++   +PDEI + ++L SC
Sbjct: 602 ---------------------------------MARMPFEPDEIMWSSILNSC 621



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 207/407 (50%), Gaps = 11/407 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G+    ++  +L+  + K      A         +D +T+NAL++G ++  
Sbjct: 160 QVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEG 219

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  A+ LF +++  G RP  FTF++++ A   + + E    VH   +K  F   V++ +
Sbjct: 220 FNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVAN 279

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K   IV A   F +  ++D ++Y  ++    WNG  ++S E+F E++    + 
Sbjct: 280 ALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDR 339

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +F   +L ++   S +++ G QIH   +    +S V   + N+++++Y +C +  +A +
Sbjct: 340 RQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVL--VGNSLVDMYAKCDKFGEANR 397

Query: 235 MFDEITEPDVVSWSERIAAACD-GVEAFG--LFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F ++     V W+  I+     G+   G  LF ++       +  T  ++L +      
Sbjct: 398 IFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLAS 457

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ+ +   + G +  V  G+AL+ MY KCG + +A  +F  +  ++SVSWN++I+ 
Sbjct: 458 LTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISA 517

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           Y++NG    AL  F  M+   L PN  +  SIL A S+   +++ +Q
Sbjct: 518 YAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQ 564


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 216/732 (29%), Positives = 362/732 (49%), Gaps = 20/732 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q +SL+I  G+  +   +T L++ +    K A     FR +    ++DI  +N++I    
Sbjct: 58  QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLI---HSKDIFLWNSIIQSHF 114

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLG-FSSRV 113
                  A   + ++R     P+ FT   +V  C  L        +HG+  KLG F    
Sbjct: 115 SNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNS 174

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + S FI  Y+K G + SA + F +    D V +TA++ GYV N E  +  +   EM  +
Sbjct: 175 AIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRI 234

Query: 174 GLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G   N  ++ +   A  D+    EG+ +HG  +K GFL      + + I+++Y RCG   
Sbjct: 235 GGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL--CFEVVKSTILSMYSRCGSPE 292

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A + F ++ + D++SW+  IA     G+  E   LF +++ ++   +E  +  +L   G
Sbjct: 293 EAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFG 352

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               +  GK   A   K          NAL+SMY K G +  A  IF +   K S  W++
Sbjct: 353 NSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIF-HSFHKSSEDWST 411

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI GYS  G   + +     ML     P+  ++ S++ + S   ++     +H + IK+ 
Sbjct: 412 MILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNS 471

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            + + S+ + L+  YGK   +  + R+     +++ +  N L S    +   AEA+ L+ 
Sbjct: 472 IIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFD 531

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       N  T  IVL ACA +  L++G+ IH    +  ++ +I + +A+IDMY KCG
Sbjct: 532 KMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCG 591

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            +E +++ F       +  WN M+  Y  HG       +F  M +  +KP+  T+L++L+
Sbjct: 592 ELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLS 651

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H G V E R     M   +G+ P L+HYA I+DLLGR G LE A+  +  MPI PD 
Sbjct: 652 ACNHTGHVLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDG 710

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W SLLSAC I+   ++G+      +E  P N+  Y++LS+LY+  G W++V K+R  M
Sbjct: 711 TVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMM 770

Query: 708 KEKFLCKEPGYS 719
           K++ + K  G+S
Sbjct: 771 KKRGVEKRAGWS 782


>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 197/617 (31%), Positives = 318/617 (51%), Gaps = 63/617 (10%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+Q+H   +K GF       +   ++ +Y R G   DA  +F ++ + ++ SW+  ++  
Sbjct: 78  GKQVHAHTLKTGFHGH--EFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVH 135

Query: 255 CDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK------- 304
            D     EA  LF+ L+ +D  +  +    +L   GG R+L  G+Q+     K       
Sbjct: 136 VDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGS 195

Query: 305 -----VGF--MEVVSIGNALISMYGKCGQVNDARSIFDY--LIFKDSVSWNSMIAGYSEN 355
                 GF    VVS  N +I  Y + G V  A+ +FD   L+ KD++SWNSMI+GY++N
Sbjct: 196 ALKIFSGFSVKNVVSY-NTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADN 254

Query: 356 GFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
             F++AL MF  +L E  +  + +T+ S+L A ++  SL++  +VH+  +  G   +  +
Sbjct: 255 LLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFV 314

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC---------------- 458
              L+  Y KC  L  ++     + +++    N L S   YA C                
Sbjct: 315 GGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISG--YACCNQLENIQNLIQKMKGD 372

Query: 459 ---------------HAE------ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
                          H E      AL L+  +  S    +  T  I+L ACA +  + +G
Sbjct: 373 GFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARG 432

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K +H  +++  Y+ D+ + +A++DMY KCG+I+ A + + +I   +L   NAM+  YA H
Sbjct: 433 KQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMH 492

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   E   LF  M   G +PD +T+L+VL+SC HAG V     +   M+  + + P L+H
Sbjct: 493 GHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKH 551

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y CIVDLL R G L+ A   + ++P  PD+ +W +LL  C I+GN++LG +A   L+EL+
Sbjct: 552 YTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELE 611

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P+N   YVLL+NLYA AG W+D+ + R+ +K++ + K PG SWI      H F + D SH
Sbjct: 612 PNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSH 671

Query: 738 SQSKEIYKELIKLYEHM 754
            ++++IY  L  L  HM
Sbjct: 672 EKTEDIYTTLDNLNTHM 688



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 245/531 (46%), Gaps = 58/531 (10%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           D+ T++SL+++C +L   + VH   LK GF    ++ +  ++ Y + G +  A + F   
Sbjct: 61  DSSTYASLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVF--VEMRSLGLELNEFSLTAVLGASFDVKE-GE 196
              +  ++TA++  +V +G F+++  +F  +++  +GLE   F +   L     V E G 
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGR 180

Query: 197 QIHGFGVK--------VGFLSG--VCNHLN-NAIMNLYVRCGQKLDAVKMFD--EITEPD 243
           Q+HG  +K        +   SG  V N ++ N ++  Y   G    A ++FD  E+   D
Sbjct: 181 QLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKD 240

Query: 244 VVSWSERIAAACDGV---EAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQ 299
            +SW+  I+   D +   EA  +F+DL   +  + + +T+ ++L++      LR GK++ 
Sbjct: 241 TISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVH 300

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS------ 353
           A     G      +G AL+ MY KC  +  A+  FD +  +D+ +WN +I+GY+      
Sbjct: 301 AQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLE 360

Query: 354 -----------------------------ENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
                                        ENG    AL +F  M   SL P+ YT+  IL
Sbjct: 361 NIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIIL 420

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A +   ++ +  QVH+H I+ G+ LD  + + L+  Y KC ++  + +V + I   N V
Sbjct: 421 PACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLV 480

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             NA+ +         E + L+R + G+    +  TF  VL +C     +E G     L 
Sbjct: 481 SQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM 540

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR--DSLAGWNAMMMG 553
                   +   + ++D+  + G +++A    +KI R  DS+  W A++ G
Sbjct: 541 TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVM-WGALLGG 590



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 225/506 (44%), Gaps = 72/506 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  +K G H    + T L+  + +F     A         R++ ++ A++S      
Sbjct: 80  QVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHG 139

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLK--LGFSSRVYL 115
               AL LF++L+   +  + F F  ++K CG L+  E+   +HGV +K      S + +
Sbjct: 140 YFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKI 199

Query: 116 VSGF-----------IENYAKSGEIVSAEMCFRDCLDL---DNVAYTAMVCGYVWNGEFD 161
            SGF           I  Y ++G +  A+  F D ++L   D +++ +M+ GY  N  FD
Sbjct: 200 FSGFSVKNVVSYNTMIVGYCENGNVEKAKELF-DQMELVGKDTISWNSMISGYADNLLFD 258

Query: 162 KSKEVFVEM-RSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNN 217
           ++  +F ++    G+E + F+L +VL A  D   ++ G+++H   V  G       H N 
Sbjct: 259 EALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGL------HWNT 312

Query: 218 ----AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-AC----------------D 256
               A++ +Y +C     A   FD +TE D  +W+  I+  AC                D
Sbjct: 313 FVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGD 372

Query: 257 GVE---------------------AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           G E                     A  LF +++ +  + + YT+  +L +      +  G
Sbjct: 373 GFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARG 432

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           KQ+ A   + G+   V IG AL+ MY KCG +  A  +++ +   + VS N+M+  Y+ +
Sbjct: 433 KQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMH 492

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  ++ + +F +ML     P+  T  S+L +  ++ +++   +    +            
Sbjct: 493 GHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHY 552

Query: 416 SCLITTYGKCNALNESKRVLSEIDKK 441
           +C++    +   L+E+  ++ +I +K
Sbjct: 553 TCIVDLLSRAGRLDEAYELVKKIPRK 578



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 162/345 (46%), Gaps = 31/345 (8%)

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           D QI+  T  +LL S    R L  GKQ+ A   K GF     +   L+ MYG+ G ++DA
Sbjct: 57  DKQIDSSTYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDA 113

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM------LEFSLIPNGYTMASIL 384
             +F  +  ++  SW ++++ + ++G+F +AL +F  +      LEF + P       +L
Sbjct: 114 NLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFP------VVL 167

Query: 385 EAVSNSKSLKQAMQVHSHIIK------------SGFLLDDSM-ISCLITTYGKCNALNES 431
           +     + L+   Q+H  +IK            SGF + + +  + +I  Y +   + ++
Sbjct: 168 KLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKA 227

Query: 432 KRVLSEID--KKNAVHINALASVLVYASCHAEALELYRT-IWGSCREVNGSTFSIVLKAC 488
           K +  +++   K+ +  N++ S         EAL ++R  +     E +  T   VL AC
Sbjct: 228 KELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAAC 287

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A M  L +GK +H  A+      + FV  A+++MY KC  ++ A+ AF  +     A WN
Sbjct: 288 ADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWN 347

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            ++ GYA       + NL  KM   G +P+  T+  +++     G
Sbjct: 348 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENG 392



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 140/295 (47%), Gaps = 23/295 (7%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T AS+LE+    ++L    QVH+H +K+GF   + + + L+  YG+   L+++  V  ++
Sbjct: 64  TYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            ++N     A+ SV V      EAL L+  +      +    F +VLK C  +  LE G+
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGR 180

Query: 499 AIHCLALKARYD-------------QDIFVESAVIDMYCKCGTIEDAKRAFRK---ICRD 542
            +H + +K   D             +++   + +I  YC+ G +E AK  F +   + +D
Sbjct: 181 QLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKD 240

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNK-MSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
           +++ WN+M+ GYA +  + E  ++F   + + G++ D  T  +VL +C     +R  +  
Sbjct: 241 TIS-WNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKE- 298

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           +   + + GL         +V++  +   L+ A++  D +    D   W  L+S 
Sbjct: 299 VHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGV-TERDTATWNVLISG 352



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 16/196 (8%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           ++++ ST++ +L++C     L  GK +H   LK  +    FVE+ ++ MY + G ++DA 
Sbjct: 58  KQIDSSTYASLLESCRT---LNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDAN 114

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---- 589
             F K+ + +L  W A++  +  HG + E  +LF K+    +  +   +  VL  C    
Sbjct: 115 LVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLR 174

Query: 590 -------CHAGLVREARTYLSCMSDLHGL-IPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
                   H  +++      S +    G  +  +  Y  ++      G +E AK   DQM
Sbjct: 175 VLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQM 234

Query: 642 P-IPPDAHIWQSLLSA 656
             +  D   W S++S 
Sbjct: 235 ELVGKDTISWNSMISG 250


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 199/677 (29%), Positives = 353/677 (52%), Gaps = 10/677 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L +AC + +    +H    K G     +  +     YAK   + +A   F +    +   
Sbjct: 10  LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL 69

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDVKE---GEQIHGFG 202
           + + +  Y    +++++  +F  M  + G   + F++   L A   ++    G+ IHGF 
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVE 259
            K   + G    + +A++ LY +CGQ  +A+K+F+E   PD V W+  +       D  E
Sbjct: 130 KKNDEI-GSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEE 188

Query: 260 AFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           A  LF  +   D   ++  T+++++S+      ++AG  +     +  F   + + N+L+
Sbjct: 189 ALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLL 248

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           ++Y K G    A ++F  +  KD +SW++MIA Y+ N   N+AL++F  M+E    PN  
Sbjct: 249 NLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSV 308

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+ S L+A + S++L++  ++H   +  GF LD S+ + LI  Y KC+  +E+  +   +
Sbjct: 309 TVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRL 368

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            KK+ V   AL S         +++ ++R +     + +      +L A + +   +Q  
Sbjct: 369 PKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQAL 428

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            +H   +++ ++ ++FV +++I++Y KCG++ DA + F+ +    +  W++M+  Y  HG
Sbjct: 429 CLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHG 488

Query: 559 CYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
              E   +F++M K   V+P+ +T+L++L++C HAGLV E       M   + L P  EH
Sbjct: 489 RGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEH 548

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           +  +VDLLGR+G L  A   I++MPIP   H+W +LL AC I+ NI++G  A   L  L 
Sbjct: 549 FGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLD 608

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P +   Y+LLSN+YA  G W++V +LR  +KE+ L K  G S + V G  H F A D  H
Sbjct: 609 PSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFH 668

Query: 738 SQSKEIYKELIKLYEHM 754
             S++IY+ L KL   M
Sbjct: 669 PDSQKIYELLRKLEAQM 685



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 197/729 (27%), Positives = 344/729 (47%), Gaps = 65/729 (8%)

Query: 47   ITYNALISGLARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKACGSL----QENEIV 100
            +T+ +++S  +        LK+FDR+   YQ LRPD+  F  +V   G +    +  +I+
Sbjct: 511  VTFLSILSACSHAGLVEEGLKIFDRMVHDYQ-LRPDSEHFGIMVDLLGRIGQLGKAMDII 569

Query: 101  HGVCLKLGFSSRVYLVSG-FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG-YVWNG 158
            + + +  G      L+    I +  + GE  +  + +   LD  +  Y  ++   Y  +G
Sbjct: 570  NRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFW---LDPSHAGYYILLSNIYAVDG 626

Query: 159  EFDKSKEVFVEMRSLGLELNEFSLTAVLGASF-DVKEGEQIHGFGVKVGFLSGVCNHLNN 217
            ++D   E+   ++  GL+        + G S  +V+ G  +H F     F      H ++
Sbjct: 627  KWDNVAELRTRIKERGLK-------KMFGQSMVEVRGG--VHSFLASDRF------HPDS 671

Query: 218  AIMNLYVRCGQKLDAVKMFDEITEPD----------VVSWSERIAAACDGVEAFGLFKDL 267
              +   +R   KL+A +M  E+  PD          V+ + +RI A     +  G     
Sbjct: 672  QKIYELLR---KLEA-QMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIG----- 722

Query: 268  RFNDFQINEYTMINLLSSVGGERI--LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
                            S+ G + I      K+  A  +  G      I      MY    
Sbjct: 723  ----------------SAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFN 766

Query: 326  QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            +++ A  +F+ +    S  WN MI G++ +G F  +L+++  M+E  L P+ +     L+
Sbjct: 767  RIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALK 826

Query: 386  AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
            + +    L++   +H H++  G   D  + + L+  Y KC  +  ++ V  ++  ++ V 
Sbjct: 827  SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS 886

Query: 446  INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
              ++ S   +   ++E L  +  +  S    N  +   VL AC  +  L +G+  H   +
Sbjct: 887  WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 946

Query: 506  KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
            +  ++ DI V +A++DMY KCG+++ A+  F +     L  W+AM+  Y  HG   +  +
Sbjct: 947  QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 1006

Query: 566  LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
            LF++M K GV+P  +T+  VL++C H+GL+ E + Y   M++   +  +L +YAC+VDLL
Sbjct: 1007 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLL 1066

Query: 626  GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
            GR G L  A   I+ MP+ PDA IW SLL AC I+ N+DL       L  L P +   +V
Sbjct: 1067 GRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHV 1126

Query: 686  LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
            LLSN+YA+   WN+V K+RK M  +   K  G+S +      H F  GD SH Q +++Y 
Sbjct: 1127 LLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYA 1186

Query: 746  ELIKLYEHM 754
            +L +L   M
Sbjct: 1187 KLEELAAPM 1195



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 258/513 (50%), Gaps = 15/513 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S + K G   D   +T L S + K A  + A +   +T + ++  +N+ +    R  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 61  QSGPALKLFDRLR-YQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLG-FSSRVYL 115
           Q    L+LF  +    G  PD FT    +KAC  L+  E   ++HG   K     S +++
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG- 174
            S  +E Y+K G++  A   F +    D V +T+MV GY  N + +++  +F +M  +  
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + L+  +L +V+ A     +VK G  +HG  ++  F   +   L N+++NLY + G +  
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL--PLVNSLLNLYAKTGCEKI 259

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F ++ E DV+SWS  IA   +     EA  LF ++    F+ N  T+++ L +   
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            R L  GK+I       GF    S+  ALI MY KC   ++A  +F  L  KD VSW ++
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVAL 379

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++GY++NG   +++ +F +ML   + P+   +  IL A S     +QA+ +H ++++SGF
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 439

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY-R 467
             +  + + LI  Y KC +L ++ ++   +  ++ V  +++ +         EALE++ +
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 499

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
            +  S    N  TF  +L AC+    +E+G  I
Sbjct: 500 MVKNSTVRPNNVTFLSILSACSHAGLVEEGLKI 532



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 177/372 (47%), Gaps = 20/372 (5%)

Query: 25   FTKFA----DFRR--AFRFLF-DTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL 77
             TKFA     F R  A   +F D  N     +N +I G A   +   +L+L+ ++  +GL
Sbjct: 755  LTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGL 814

Query: 78   RPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
            +PD F F   +K+C     LQ  +++H   +  G S+ +++ +  ++ YAK G+I +A +
Sbjct: 815  KPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARL 874

Query: 135  CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD--- 191
             F      D V++T+M+ GY  NG   ++   F  MRS G+  N  S+ +VL A  +   
Sbjct: 875  VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGA 934

Query: 192  VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
            +++GE  H + ++ GF   +   +  AIM++Y +CG    A  +FDE    D+V WS  I
Sbjct: 935  LRKGEWFHSYVIQTGFEFDIL--VATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMI 992

Query: 252  AA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGF 307
            A+      G +A  LF  +     + +  T   +LS+     +L  GK   Q    +   
Sbjct: 993  ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVI 1052

Query: 308  MEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               +S    ++ + G+ GQ+++A  + + + +  D+  W S++     +   + A  +  
Sbjct: 1053 ARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIAD 1112

Query: 367  HMLEFSLIPNGY 378
            H+     +  GY
Sbjct: 1113 HLFHLDPVHAGY 1124



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 5/101 (4%)

Query: 3    YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQ 61
            +S +I+ G   D +++T ++  ++K      A R LFD T  +D++ ++A+I+       
Sbjct: 942  HSYVIQTGFEFDILVATAIMDMYSKCGSLDLA-RCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
               A+ LFD++   G+RP   TF+ ++ AC   G L+E ++
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKM 1041


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 306/580 (52%), Gaps = 46/580 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLF-----KDLR 268
           NA+++         D   +F  +T+ D+VS++  IA    G    +A  ++      D  
Sbjct: 76  NALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSS 135

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK----- 323
               +I   TM+ + +S  G+R L  GKQ      ++GF     +G+ L+ MY K     
Sbjct: 136 VRPSRITMSTMV-MAASALGDRAL--GKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVG 192

Query: 324 --------------------------CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
                                     C  V +AR +F+ +  +DS++W +M+ G+++NG 
Sbjct: 193 DAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGL 252

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-- 415
            ++AL++F  M    +  + YT  SIL A     +L+Q  Q+H++II++ +  DD++   
Sbjct: 253 ESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRY--DDNVFVG 310

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S L+  Y KC ++  ++ V   +  KN +   AL        C  EA+ ++  +     +
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T   V+ +CA +  LE+G   HCLAL +     I V +A++ +Y KCG+IEDA R 
Sbjct: 371 PDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++       W A++ GYAQ G   E  +LF KM   GVKPD +T++ VL++C  AG V
Sbjct: 431 FDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFV 490

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            + R+Y   M   HG++P  +HY C++DL  R G L+ A+  I QMP+ PDA  W +LLS
Sbjct: 491 EKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC + G++++G  A   LLE+ P N ++YVLL +++A+ G WN+V +LR+ M+++ + KE
Sbjct: 551 ACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKE 610

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           PG SWI      H F A D SH  SK IY++L  L   M+
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKML 650



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 224/460 (48%), Gaps = 51/460 (11%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRY--QGLRPDAFTFSSLVKACGSLQENEI- 99
            RDI++YNA+I+G +       A++++  L      +RP   T S++V A  +L +  + 
Sbjct: 100 QRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALG 159

Query: 100 --VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC------------------ 139
              H   L+LGF +  ++ S  ++ YAK   +  A+  F +                   
Sbjct: 160 KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRC 219

Query: 140 -------------LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
                         D D++ +T MV G+  NG   ++ E+F  MR  G+ +++++  ++L
Sbjct: 220 KMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSIL 279

Query: 187 ---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
              GA   +++G+QIH + ++  +   V   + +A++++Y +C     A  +F  +T  +
Sbjct: 280 TACGALSALEQGKQIHAYIIRTRYDDNV--FVGSALVDMYSKCRSIKLAETVFRRMTCKN 337

Query: 244 VVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           ++SW+  I       C   EA  +F +++ +    ++YT+ +++SS      L  G Q  
Sbjct: 338 IISWTALIVGYGQNGCSE-EAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFH 396

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
                 G M  +++ NAL+++YGKCG + DA  +FD + F D VSW ++++GY++ G   
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAK 456

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCL 418
           + +D+F  ML   + P+G T   +L A S +  +++     HS     G +  D   +C+
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCM 516

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           I  Y +   L E++    E  K+  +H +A+    + ++C
Sbjct: 517 IDLYSRSGKLKEAE----EFIKQMPMHPDAIGWGTLLSAC 552



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 176/347 (50%), Gaps = 13/347 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  T+I+   +      A R      +RD IT+  +++G  +      AL++F R+R+Q
Sbjct: 207 VMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQ 266

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+  D +TF S++ ACG   +L++ + +H   ++  +   V++ S  ++ Y+K   I  A
Sbjct: 267 GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLA 326

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
           E  FR     + +++TA++ GY  NG  +++  VF EM+  G++ ++++L +V+ +  + 
Sbjct: 327 ETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANL 386

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++EG Q H   +  G +  +   ++NA++ LY +CG   DA ++FDE++  D VSW+ 
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYIT--VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 444

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKV 305
            ++         E   LF+ +     + +  T I +LS+      +  G+    +     
Sbjct: 445 LVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDH 504

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
           G + +      +I +Y + G++ +A      + +  D++ W ++++ 
Sbjct: 505 GIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 181/550 (32%), Positives = 297/550 (54%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 87  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  + G+QI     K+G+   + +  +LIS+Y + G++ DAR +FD             
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM +++ A + S S++   QVHS I   GF  +  +++ L+  Y KC  L  +  +   
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEG 326

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIG 386

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK+  +    + +++IDMY KCG IE A + F  I   SL+ WNAM+ G+
Sbjct: 387 RWIHVYIDKRLKSATNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG      ++F++M K G++PD+IT++ +L++C  +G++   R     M+  + + P+
Sbjct: 446 AMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPK 505

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC I GN++LG      L+
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLI 565

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P+N   YVLLSN+YA+AG WN+V K+R  + +K + K PG S I +    H F  GD
Sbjct: 566 KIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 626 KFHPRNREIY 635



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 224/492 (45%), Gaps = 64/492 (13%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  +L   +IS    F     A       Q  +++ +N +  G 
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVIS--PHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       ALKL+  +   GL P+++TF  L+K+C    + +E + +HG  LKLG+   +
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           ++ +  I  Y ++G +  A   F      D V+YTA++ GY                   
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G + ++ E+F EM    +  +E ++  V+ A   S  ++ G Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF S +   + N++M+LY +CG+   A  +F+ +   DV+SW+  I        
Sbjct: 290 SWIDDHGFGSNL--KIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNL 347

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +  + N+ TM+++L +      +  G+ I  +  K         S+ 
Sbjct: 348 YKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLR 407

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A  +F+ ++ K   SWN+MI G++ +G  + A D+F  M +  + 
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-------CLITTYGKCNA 427
           P+  T   +L A S S  L     +  HI ++  +  D  I+       C+I   G    
Sbjct: 468 PDDITFVGLLSACSRSGML----DLGRHIFRT--MTQDYKITPKLEHYGCMIDLLGHSGL 521

Query: 428 LNESKRVLSEID 439
             E++ +++ ++
Sbjct: 522 FKEAEEMINNME 533



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/563 (23%), Positives = 243/563 (43%), Gaps = 87/563 (15%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
           SL+  C +LQ   ++H   +K G  +  Y +S  +E    S     +  A   F    + 
Sbjct: 38  SLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEP 97

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
           + + +  M  G+  + +   + +++V M SLGL  N ++   +L +   S   KEG+QIH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIH 157

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA--------------------------- 232
           G  +K+G+   +  H   +++++YV+ G+  DA                           
Sbjct: 158 GHVLKLGYDLDLFVH--TSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215

Query: 233 ----VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSS 285
                K+FDEI   DVVSW+  I+   +     EA  LFK++   + + +E TM+ ++S+
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 +  G+Q+ ++    GF   + I N+L+ +Y KCG++  A  +F+ L++KD +SW
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N++I GY+    + +AL +F  ML     PN  TM SIL A ++  ++     +H +I K
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 406 --SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
                    S+ + LI  Y KC  +  + +V + I  K+    NA+            A 
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           +++  +     E +  TF  +L AC+                                  
Sbjct: 456 DIFSRMRKIGIEPDDITFVGLLSACS---------------------------------- 481

Query: 524 CKCGTIEDAKRAFRKICRD-----SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
            + G ++  +  FR + +D      L  +  M+      G + E   + N M    ++PD
Sbjct: 482 -RSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME---MEPD 537

Query: 579 EITYLAVLTSCCHAGLVREARTY 601
            + + ++L +C   G V    ++
Sbjct: 538 GVIWCSLLKACKIRGNVELGESF 560



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 39/287 (13%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSG-----FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           L  + N K+L+    +H+ +IK+G     + L   +  C+I+ +   + L  +  V   I
Sbjct: 37  LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPH--FDGLPYAISVFETI 94

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            + N +  N +      +S    AL+LY  +       N  TF  +LK+CA     ++G+
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF-RKICRD--------------- 542
            IH   LK  YD D+FV +++I +Y + G +EDA++ F R   RD               
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214

Query: 543 ---------------SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
                           +  WNAM+ GYA+ G Y E   LF +M K  ++PDE T + V++
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           +C  +G +   R   S + D HG    L+    ++DL  + G LE A
Sbjct: 275 ACAQSGSIELGRQVHSWIDD-HGFGSNLKIVNSLMDLYSKCGELETA 320



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 173/393 (44%), Gaps = 46/393 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  ++K G+ LD  + T+LIS + +      A +    + +RD+++Y ALI G A   
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF  +    +RPD  T  ++V 
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC   GS++    VH      GF S + +V+  ++ Y+K GE+ +A   F   L  D ++
Sbjct: 275 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVIS 334

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
           +  ++ GY     + ++  +F EM   G   N+ ++ ++L A     + D+  G  IH +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDI--GRWIHVY 392

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGV 258
             K    +   + L  +++++Y +CG    A ++F+ I    + SW+  I   A      
Sbjct: 393 IDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGNAL 317
            AF +F  +R    + ++ T + LLS+     +L  G+ I +           +     +
Sbjct: 453 AAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCM 512

Query: 318 ISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
           I + G  G   +A  + + + +  D V W S++
Sbjct: 513 IDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLL 545


>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
          Length = 591

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/527 (32%), Positives = 287/527 (54%), Gaps = 4/527 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-LRFNDFQIN 275
           NA++++Y RCG++ DA ++FDE+   D VSW+  IAA+    +A  LF+  LR +    +
Sbjct: 61  NALVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGDALALFRRMLRSDARACD 120

Query: 276 EYTMINLLS--SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             T   +LS  +  G   L A   +       GF   V +GNAL++ Y +CG    A  +
Sbjct: 121 RATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERV 180

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  K+ ++W +MI+G +    + ++  +F  M+  ++  N  T +  L A + S + 
Sbjct: 181 FHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIR-TVDANNATYSCTLLACARSLAA 239

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           ++  QVH  ++K+GF  D  + S L+  Y KC  + ++  V     + + V +  +    
Sbjct: 240 REGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGF 299

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  +A EL+  + G+  E++ +T S VL A  A      GK IH L +K  +  + 
Sbjct: 300 AQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNT 359

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V + +++MY KCG + ++ + F ++   +   WN+++  +A+HG   EV  LF  M   
Sbjct: 360 YVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKAD 419

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G KP ++T+L++L +C H G  ++    L+ MS  +G++P++EHYAC+VD+LGR GLL+ 
Sbjct: 420 GAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDD 479

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           AK  I+  P    A +WQ+L+ AC+ +GN ++G  A  KLL L P   + YVLLSN+Y+S
Sbjct: 480 AKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSS 539

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
            G W+D  K+ K M E  L K+ G SWI +    H F    +SH  S
Sbjct: 540 EGRWDDRAKVMKRMSEMGLRKDTGKSWIELEKEVHSFVVRSTSHPNS 586



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 227/459 (49%), Gaps = 28/459 (6%)

Query: 2   IYSLLIKNGHHLD-----PILS------TTLISHFTKFADFRRAFRFLFDTQNRDIITYN 50
           +++ ++KN  H       P L         L+S + +      A R   + + RD +++N
Sbjct: 33  LHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRREDAARVFDEMRVRDAVSWN 92

Query: 51  ALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACG-----SLQENEIVHGVC 104
           +LI+       +G AL LF R LR      D  TF++++  C      SL    +VHG+ 
Sbjct: 93  SLIAASR---GAGDALALFRRMLRSDARACDRATFTTVLSECARAGAASLPACAMVHGLV 149

Query: 105 LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
           +  GF + V + +  +  Y + G   SAE  F    + + + +TAM+ G      + +S 
Sbjct: 150 VSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKESF 209

Query: 165 EVFVEM-RSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            +F +M R++      +S T +  A S   +EG+Q+HG  VK GF + +  H+ + +M++
Sbjct: 210 SLFGQMIRTVDANNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADL--HVESGLMDV 267

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTM 279
           Y +CG   DA+ +F    EPD V  +  +   A +G+E  AF LF ++     +I+E T+
Sbjct: 268 YSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTV 327

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
             +L + G       GKQI A   K  F     + N L++MY KCG++ ++  +FD +  
Sbjct: 328 STVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPS 387

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+SVSWNS+IA ++ +G  ++   +F  M      P   T  S+L A S+  S K+ +++
Sbjct: 388 KNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEI 447

Query: 400 -HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            +S   + G L      +C++   G+   L+++K  + +
Sbjct: 448 LNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIED 486



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 192/366 (52%), Gaps = 14/366 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L++  G   +  +   L++ + +      A R       +++IT+ A+ISG+AR   
Sbjct: 145 VHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAEL 204

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              +  LF ++  + +  +  T+S  + AC    + +E + VHG+ +K GF + +++ SG
Sbjct: 205 YKESFSLFGQM-IRTVDANNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADLHVESG 263

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+K G +  A   FR C + D V  T ++ G+  NG  +K+ E+F EM   G E++
Sbjct: 264 LMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEID 323

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E +++ VL   GAS     G+QIH   +K  F  GV  ++ N ++N+Y +CG+  ++V++
Sbjct: 324 ENTVSTVLGAFGASAPFALGKQIHALVIKRCF--GVNTYVCNGLVNMYSKCGELRESVQV 381

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FDE+   + VSW+  IAA      G E + LF+ ++ +  +  + T ++LL +       
Sbjct: 382 FDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSA 441

Query: 293 RAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS-VSWNSMIA 350
           + G +I  +   + G +  +     ++ M G+ G ++DA+S  +   F DS + W +++ 
Sbjct: 442 KKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMG 501

Query: 351 GYSENG 356
             S +G
Sbjct: 502 ACSFHG 507



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 74/142 (52%), Gaps = 4/142 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L+IK    ++  +   L++ ++K  + R + +   +  +++ +++N++I+  AR  
Sbjct: 345 QIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHG 404

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRVYLV 116
                 +LF+ ++  G +P   TF SL+ AC   GS ++  EI++ +  + G   R+   
Sbjct: 405 HGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHY 464

Query: 117 SGFIENYAKSGEIVSAEMCFRD 138
           +  ++   ++G +  A+    D
Sbjct: 465 ACVVDMLGRAGLLDDAKSFIED 486


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 186/561 (33%), Positives = 303/561 (54%), Gaps = 7/561 (1%)

Query: 199 HGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
           H    K+   S V N ++  +++N+Y + G   DA ++FD + + +  SWS  +A     
Sbjct: 140 HALACKIP--SAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAE 197

Query: 257 --GVEAFGLFK-DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               EAF LF+  L     + +E+    +LS+V     L  G+Q+     K G ++ VS+
Sbjct: 198 KCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSV 257

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N+L++MY K G +  A  +F+    ++S++W++MI GY++NG  + A+ MF  M     
Sbjct: 258 ENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 317

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P  +T   +L A S+  +L    Q H  ++K GF +   + S L+  Y KC  + ++K 
Sbjct: 318 TPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKE 377

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              ++ + + V   A+ S  V    H EAL LY  +       + ST +  L+ACA +  
Sbjct: 378 GFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAA 437

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           LE GK +H   +K        V SA+  MY KCG +ED    FR+I    +  WN+++ G
Sbjct: 438 LEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISG 497

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           ++Q+GC +   +LF +M   G  PD IT++ +L +C H GLV     Y S M+  +GL P
Sbjct: 498 FSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTP 557

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           +L+HYAC+VD+L R G+L+ AK  I+ + I     +W+ +L AC    + D+G  AG +L
Sbjct: 558 RLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERL 617

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           +EL   + S Y+LLSN+YAS   WNDV ++R  M+ + + K+PG SW+ +    H F  G
Sbjct: 618 MELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVG 677

Query: 734 DSSHSQSKEIYKELIKLYEHM 754
           +  H +++ I  +L +L +HM
Sbjct: 678 EQQHPEAENINAQLRRLAKHM 698



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 34/470 (7%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           T+L++ + K      A R       R+  +++ +++G A    S  A  LF RL  +   
Sbjct: 157 TSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF-RLMLEECP 215

Query: 79  PDAFTFS-----SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            +   F      S V     L   E +HG+ +K G    V + +  +  YAK+G + +A 
Sbjct: 216 SEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAF 275

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F    + +++ ++AM+ GY  NGE D +  +F +M + G    EF+   VL AS D+ 
Sbjct: 276 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335

Query: 194 E---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
               G+Q HG  VK+GF   +  ++ +A++++Y +CG   DA + FD++ E D+V W+  
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQI--YVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAM 393

Query: 251 IAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           ++      +  EA  L+  +       ++ T+ + L +  G   L  GKQ+     K G 
Sbjct: 394 VSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL 453

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +G+AL +MY KCG + D  S+F  +  +D ++WNS+I+G+S+NG  N ALD+F  
Sbjct: 454 GLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEE 513

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCN 426
           M     IP+  T  +IL A S+   + +  +  S + K  G        +C++    +  
Sbjct: 514 MKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAG 573

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L E+K  +  I              + + +C      L+R + G+CR +
Sbjct: 574 MLKEAKDFIESI-------------TIDHGTC------LWRIVLGACRSL 604



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 154/610 (25%), Positives = 268/610 (43%), Gaps = 40/610 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRF-LFD---TQNRDIITYNALISGLA 57
           +++  +K+G      ++ +LI+ ++       A  F +FD      RD+ ++N+L++ L+
Sbjct: 34  LHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLNPLS 93

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIV---HGVCLKLGFS-SRV 113
                    +    L    + P   +F++   A             H +  K+  + S V
Sbjct: 94  GHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNV 153

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRS 172
           Y+ +  +  Y K G +  A   F      ++ +++ MV GY      +++ ++F + +  
Sbjct: 154 YVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 213

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
              E +EF  TAVL A      +  GEQ+HG  VK G L  V   + N+++ +Y + G  
Sbjct: 214 CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVS--VENSLVTMYAKAGCM 271

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +F+   E + ++WS  I       E   A  +F  +    F   E+T + +L++ 
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GKQ      K+GF   + + +AL+ MY KCG + DA+  FD L   D V W 
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M++G+ +NG   +AL ++  M +  +IP+  T+AS L A +   +L+   Q+H+ I+K 
Sbjct: 392 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 451

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G  L   + S L T Y KC  L +   V   I  ++ +  N++ S      C   AL+L+
Sbjct: 452 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 511

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-----ALKARYDQ-----DI--- 513
             +       +  TF  +L AC+ M  +++G     L      L  R D      DI   
Sbjct: 512 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 571

Query: 514 ---------FVESAVIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEV 563
                    F+ES  ID   C    +  A R+ R     + AG   M +G      Y  +
Sbjct: 572 AGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILL 631

Query: 564 SNLFNKMSKF 573
           SN++    K+
Sbjct: 632 SNIYASQRKW 641



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 158/293 (53%), Gaps = 13/293 (4%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q++ L++K+G  LD + +  +L++ + K      AF     ++ R+ IT++A+I+G A+ 
Sbjct: 241 QMHGLIVKDGL-LDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQN 299

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            ++  A+ +F ++   G  P  FTF  ++ A    G+L   +  HG+ +KLGF  ++Y+ 
Sbjct: 300 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK 359

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK G I  A+  F    ++D V +TAMV G+V NGE +++  ++  M   G+ 
Sbjct: 360 SALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 419

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ ++ + L A   +   + G+Q+H   VK G   G+   + +A+  +Y +CG   D +
Sbjct: 420 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL--GLGAPVGSALSTMYSKCGNLEDGM 477

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
            +F  I + DV++W+  I+       G  A  LF++++      +  T IN+L
Sbjct: 478 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL 530


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 187/609 (30%), Positives = 305/609 (50%), Gaps = 49/609 (8%)

Query: 190 FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
           ++++ G Q+H   V  G    VC  L + ++ +Y + G   DA +MFD+++E +V SW+ 
Sbjct: 24  YNLRLGFQVHAQLVVNGV--DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTA 81

Query: 250 RIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            +   C   D  E   LF  +     + + +    +  +    +  R GK +  +   +G
Sbjct: 82  IMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG 141

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F     +  +++ M+ KCG+++ AR  F+ + FKD   WN M++GY+  G F +AL++F 
Sbjct: 142 FEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFR 201

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKC 425
            M+   + PN  T+AS + A +N   L+   ++H + IK   L  D ++ + L+  Y KC
Sbjct: 202 KMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC 261

Query: 426 NALNESKR-------------------------------------------VLSEIDKKN 442
            ++  ++R                                           V SE+  ++
Sbjct: 262 RSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRD 321

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            V  N++ S    +     AL+L R +  S  EVN  T    L AC+ +  L QGK IH 
Sbjct: 322 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 381

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
             ++   D   F+ +++IDMY +CG+I+ ++R F  + +  L  WN M+  Y  HG   +
Sbjct: 382 FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMD 441

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
             NLF +    G+KP+ IT+  +L++C H+GL+ E   Y   M   + + P +E YAC+V
Sbjct: 442 AVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMV 501

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
           DLL R G        I++MP  P+A +W SLL AC I+ N DL   A   L EL+P +  
Sbjct: 502 DLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSG 561

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKE 742
            YVL++N+Y++AG W D  K+R  MKE+ + K PG SWI V    H F  GD+SH   ++
Sbjct: 562 NYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQ 621

Query: 743 IYKELIKLY 751
           I  ++  LY
Sbjct: 622 ISAKMESLY 630



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 218/485 (44%), Gaps = 56/485 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ L+ NG  +   L + L+  + +      A R       R++ ++ A++       
Sbjct: 31  QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                +KLF  +  +G+RPD F F  + KAC  L+   +   V+   L +GF     +  
Sbjct: 91  DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 150

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ + K G +  A   F +    D   +  MV GY   GEF K+  VF +M   G++ 
Sbjct: 151 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKP 210

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++ + + A  +   ++ G +IHG+ +KV  L      + N++++ Y +C     A +
Sbjct: 211 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL-LVGNSLVDYYAKCRSVEVARR 269

Query: 235 MFDEITEPDVVSWS---------------------ERIAAACD----------------- 256
            F  I + D+VSW+                     +R+  AC                  
Sbjct: 270 KFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSII 329

Query: 257 --------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                    V A  L +++  ++ ++N  TM++ L +      LR GK+I  F  + G  
Sbjct: 330 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 389

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               I N+LI MYG+CG +  +R IFD +  +D VSWN MI+ Y  +GF   A+++F   
Sbjct: 390 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 449

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCN 426
               L PN  T  ++L A S+S  +++  + +  ++K+ + +D ++   +C++    +  
Sbjct: 450 RTMGLKPNHITFTNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYACMVDLLSRAG 508

Query: 427 ALNES 431
             NE+
Sbjct: 509 QFNET 513



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 120/237 (50%), Gaps = 7/237 (2%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           ASIL+      +L+   QVH+ ++ +G  + + + S L+  Y +   + +++R+  ++ +
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +N     A+  +      + E ++L+  +       +   F  V KAC+ + +   GK +
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           +   L   ++ +  V+ +++DM+ KCG ++ A+R F +I    +  WN M+ GY   G +
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
            +  N+F KM   GVKP+ IT  + +++C +  L+R  R       ++HG   ++E 
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGR-------EIHGYCIKVEE 243



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 10/198 (5%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +L+ C  + +L  G  +H   +    D   F+ S ++++YC+ G +EDA+R F K+ 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             ++  W A+M  Y   G Y E   LF  M   GV+PD   +  V  +C      R  + 
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 601 YLSCMSDLHGLIPQLEHYAC----IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
               M     L    E  +C    I+D+  + G ++ A+   +++    D  +W  ++S 
Sbjct: 133 VYDYM-----LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-KDVFMWNIMVSG 186

Query: 657 CTIYGNIDLGLLAGSKLL 674
            T  G     L    K++
Sbjct: 187 YTSKGEFKKALNVFRKMV 204



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 37/255 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  +I+ G      +  +LI  + +    +++ R       RD++++N +IS      
Sbjct: 378 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 437

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               A+ LF + R  GL+P+  TF++L+ AC                         SG I
Sbjct: 438 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSH-----------------------SGLI 474

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           E   K  +++  E      ++     Y  MV      G+F+++ E F+E   +  E N  
Sbjct: 475 EEGWKYFKMMKTEYAMDPAVE----QYACMVDLLSRAGQFNETLE-FIE--KMPFEPNAA 527

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM-NLYVRCGQKLDAVK---MF 236
              ++LGA   +     +  +  +  F     +  N  +M N+Y   G+  DA K   + 
Sbjct: 528 VWGSLLGAC-RIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLM 586

Query: 237 DE--ITEPDVVSWSE 249
            E  +T+P   SW E
Sbjct: 587 KERGVTKPPGCSWIE 601


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 207/732 (28%), Positives = 378/732 (51%), Gaps = 16/732 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
            IY  ++ NG   D  + T+LI  F K      A R +FD    +D + +NA+ISGL++ 
Sbjct: 120 NIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA-RNVFDKMPVKDGVCWNAMISGLSQS 178

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLV 116
                AL++F R++ +G   D  +  +L  A   L +    + +HG  ++      V   
Sbjct: 179 LNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVV--S 236

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y K G++ SA+  F      D+V++  M+ GYV NG + +  ++  +MR   ++
Sbjct: 237 NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVK 296

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +N+ ++   L       D+++G++I+ + +++G +S +   +   I+ +Y +CG+   A 
Sbjct: 297 MNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIV--VATPIVCMYAKCGELKKAR 354

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F  +   D+V+WS  ++A  +     E   +F+ +++   + ++  +  L+S      
Sbjct: 355 ELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEIS 414

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  GK +  +  K      +S+   L+SMY +      A ++F+ +  KD V WN++I 
Sbjct: 415 NIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLIN 474

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+++ G  + AL+MF  +    ++P+  TM  +  A +    L     +H  I KSGF  
Sbjct: 475 GFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFES 534

Query: 411 DDSMISCLITTYGKCNALNESKRV-LSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           D  +   L+  Y KC +L   +R+ L     K+ V  N + +  ++     EA+  +R +
Sbjct: 535 DIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRM 594

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  N  TF  +L A + ++ L +  A H   ++  +     + +++IDMY KCG +
Sbjct: 595 KLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQL 654

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             +++ F ++       WNAM+  YA HG       LF+ M +  V+ D ++Y++VL++C
Sbjct: 655 RYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSAC 714

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL++E     + M + H + P +EHYAC+VDLLG  GL +     +++M   PDA +
Sbjct: 715 RHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARV 774

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL+AC I+ N+ LG +A   LL+L+P N   +V+LS++YA  G WND  + R  +  
Sbjct: 775 WGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINN 834

Query: 710 KFLCKEPGYSWI 721
             L K PGYSW+
Sbjct: 835 HGLKKIPGYSWV 846



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 171/684 (25%), Positives = 327/684 (47%), Gaps = 27/684 (3%)

Query: 11  HHLDPILSTTLISHFTKFAD-------FRRAFRFLFDTQNRDIITYNALISGLARFCQSG 63
           HH+ PI      +H+ K  +         +        +N  +I YN+ I   ++F    
Sbjct: 22  HHIFPIQQQNNNNHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFH 81

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFI 120
            A+ L+  +   GL+PD FTF+ ++KAC S     E   ++   +  G    VY+ +  I
Sbjct: 82  KAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLI 141

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + + K G + +A   F      D V + AM+ G   +    ++ E+F  M+  G E+++ 
Sbjct: 142 DMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKV 201

Query: 181 S---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           S   L   +    DV   + IHG+ V+      +C  ++N+++++Y +CG    A ++FD
Sbjct: 202 SILNLAPAVSRLGDVGCCKSIHGYVVR----RSICGVVSNSLIDMYCKCGDVHSAQRVFD 257

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   D VSW+  +A         E   L   +R  + ++N+  ++N L  V   R L  
Sbjct: 258 RMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEK 317

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GK+I  +  ++G M  + +   ++ MY KCG++  AR +F  L  +D V+W++ ++   E
Sbjct: 318 GKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVE 377

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            G+  + L +F  M    L P+   ++ ++   +   ++     +H + IK+    D SM
Sbjct: 378 TGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISM 437

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV-YASCHAEALELYRTIWGSC 473
           ++ L++ Y +      +  + + +  K+ V  N L +    Y   H  ALE++  +  S 
Sbjct: 438 VTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHL-ALEMFNRLQLSG 496

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              +  T   +  ACA M DL+ G  +H    K+ ++ DI V+ A++DMY KCG++   +
Sbjct: 497 ILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVE 556

Query: 534 RAF--RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           R F   K  +D ++ WN M+ GY  +G  +E  + F +M    V+P+ +T++ +L +  +
Sbjct: 557 RLFLLTKHVKDEVS-WNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSY 615

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
             ++REA  + +C+  + G +        ++D+  + G L  ++    +M    D   W 
Sbjct: 616 LSILREAMAFHTCIIRM-GFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEME-NKDTISWN 673

Query: 652 SLLSACTIYGNIDLGLLAGSKLLE 675
           ++LSA  ++G  +L +   S + E
Sbjct: 674 AMLSAYAMHGQGELAVALFSVMQE 697



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 144/605 (23%), Positives = 262/605 (43%), Gaps = 72/605 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +IY+  ++ G   D +++T ++  + K  + ++A       + RD++ ++A +S L    
Sbjct: 320 EIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETG 379

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
                L +F  ++Y+GL+PD    S LV  C  +      +I+H   +K    S + +V+
Sbjct: 380 YPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVT 439

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y +      A   F      D V +  ++ G+   G+   + E+F  ++  G+  
Sbjct: 440 TLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILP 499

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++  +  A     D+  G  +HG   K GF S +  H+  A+M++Y +CG      +
Sbjct: 500 DSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDI--HVKVALMDMYAKCGSLCSVER 557

Query: 235 MFDEITE-PDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F       D VSW+  IA         EA   F+ ++  + + N  T + +L +V    
Sbjct: 558 LFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLS 617

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           ILR          ++GF+    IGN+LI MY KCGQ+  +   F  +  KD++SWN+M++
Sbjct: 618 ILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLS 677

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y+ +G    A+ +F  M E ++  +  +  S+L A  +S  +++   + + + +    +
Sbjct: 678 AYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHH-V 736

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           + SM   +C++   G     +E   VLS ++K                       E    
Sbjct: 737 EPSMEHYACMVDLLGCAGLFDE---VLSLLNKMTT--------------------EPDAR 773

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKC 526
           +WG+           +L AC   +++  G+    H L L+ R      V S   D+Y +C
Sbjct: 774 VWGA-----------LLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLS---DIYAQC 819

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G   DA+R    I    L      + GY+  G +       N+M K   KP  IT     
Sbjct: 820 GRWNDARRTRSHINNHGLKK----IPGYSWVGAHK------NEMEK---KPTRIT----- 861

Query: 587 TSCCH 591
            SC H
Sbjct: 862 MSCNH 866


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/639 (30%), Positives = 327/639 (51%), Gaps = 13/639 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +E +   G++  A   F      D  AY A++  Y W G F  + +++  M    +  N+
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 180 FSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           ++   VL    A  D++ G  IH      G  + +   ++ A+++LY+RC +   A  +F
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDL--FVSTALIDLYIRCARFGPARNVF 158

Query: 237 DEITEPDVVSWSERIAA-ACDGVEAFGLFKDLRFND---FQINEYTMINLLSSVGGERIL 292
            ++   DVV+W+  +A  A  G+    +   L   D    + N  T+++LL  +     L
Sbjct: 159 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGAL 218

Query: 293 RAGKQIQAFCYKVGFM---EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             G  I A+C +       E V IG AL+ MY KC Q+  A  +F  +  ++ V+W+++I
Sbjct: 219 FQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALI 278

Query: 350 AGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            G+       +A ++F  ML   L   +  ++AS L   ++   L    Q+H+ I KSG 
Sbjct: 279 GGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D +  + L++ Y K   +NE+     EI  K+ +   AL S  V      EA  +++ 
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKK 398

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     E + +T   ++ AC+ +  L+ GK  H   +      +  + +++IDMY KCG 
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGK 458

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I+ +++ F K+    +  WN M+ GY  HG   E + LF  M   G  PD++T++ ++ +
Sbjct: 459 IDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA 518

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GLV E + +   M+  +G++P++EHY C+VDLL R GLL+ A   I  MP+  D  
Sbjct: 519 CSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVR 578

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL AC I+ NIDLG      + +L P+    +VLLSN++++AG +++  ++R   K
Sbjct: 579 VWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQK 638

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            K   K PGYSWI + G  H F  GD SH  S++IY EL
Sbjct: 639 VKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHEL 677



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 258/600 (43%), Gaps = 68/600 (11%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK-L 68
           G H D  +ST LI  + + A F  A         RD++ +NA+++G A       A+  L
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 69  FDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS---RVYLVSGFIEN 122
            D   + GLRP+A T  SL+      G+L +   +H  CL+        +V + +  ++ 
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFS 181
           YAK  ++V A   F      ++V ++A++ G+V      ++  +F +M   GL  L+  S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + + L    +  D+  G Q+H    K G  + +    +N+++++Y + G   +A   FDE
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLT--ASNSLLSMYAKAGLINEATMFFDE 367

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D +S+   ++         EAF +FK ++  + + +  TM++L+ +      L+ G
Sbjct: 368 IAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG 427

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           K         G     SI N+LI MY KCG+++ +R +FD +  +D VSWN+MIAGY  +
Sbjct: 428 KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIH 487

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSM 414
           G   +A  +F  M      P+  T   ++ A S+S  + +       +  K G L     
Sbjct: 488 GLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEH 547

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
             C++    +   L+E+ + +  +  K  V                        +WG+  
Sbjct: 548 YICMVDLLARGGLLDEAYQFIQSMPLKADVR-----------------------VWGA-- 582

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--------QDIFVESAVIDMYCKC 526
                    +L AC    +++ GK +  +  K   +         +IF  +   D   + 
Sbjct: 583 ---------LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 633

Query: 527 GTIEDAKRAFRKICRDSLAGWN----AMMMGYAQHGC----YHEVSNLFNKMSKFGVKPD 578
             I+  K  F+K    S    N    A + G   H C    YHE+ N+   + K G + D
Sbjct: 634 RIIQKVK-GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQAD 692



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 237/518 (45%), Gaps = 28/518 (5%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS- 93
           R +FD     D   YNALI   +       A+ L+  +    + P+ +TF  ++KAC + 
Sbjct: 54  RQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSAL 113

Query: 94  --LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
             L+    +H      G  + +++ +  I+ Y +      A   F      D VA+ AM+
Sbjct: 114 VDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAML 173

Query: 152 CGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVL------GASFDVKEGEQIHGFGVK 204
            GY  +G +  +    ++M+   GL  N  +L ++L      GA F   +G  IH + ++
Sbjct: 174 AGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF---QGTSIHAYCLR 230

Query: 205 VGFLSGVCNHL-NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDGV-EA 260
                     L   A++++Y +C Q + A ++F  +   + V+WS  I     CD + EA
Sbjct: 231 ACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEA 290

Query: 261 FGLFKDLRFNDF-QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           F LFKD+       ++  ++ + L        L  G Q+ A   K G    ++  N+L+S
Sbjct: 291 FNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLS 350

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY K G +N+A   FD +  KD++S+ ++++G  +NG   +A  +F  M   ++ P+  T
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIAT 410

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           M S++ A S+  +L+     H  +I  G  L+ S+ + LI  Y KC  ++ S++V  ++ 
Sbjct: 411 MVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP 470

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK- 498
            ++ V  N + +         EA  L+  +       +  TF  ++ AC+    + +GK 
Sbjct: 471 ARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH 530

Query: 499 ----AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
                 H   +  R +  I     ++D+  + G +++A
Sbjct: 531 WFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEA 564



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 18/265 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L+ K+G H D   S +L+S + K      A  F  +   +D I+Y AL+SG  +  
Sbjct: 328 QLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNG 387

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A  +F +++   + PD  T  SL+ AC    +LQ  +  HG  +  G +    + +
Sbjct: 388 KAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN 447

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G+I  +   F      D V++  M+ GY  +G   ++  +F+ M++ G   
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAP 507

Query: 178 NEFSLTAVLGA---SFDVKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           ++ +   ++ A   S  V EG+       H +G+       +C      +++L  R G  
Sbjct: 508 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYIC------MVDLLARGGLL 561

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A +    +  + DV  W   + A
Sbjct: 562 DEAYQFIQSMPLKADVRVWGALLGA 586


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 374/709 (52%), Gaps = 36/709 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           QI+ L++K+ +  D  L   LIS + K+  +    R +FD  + R+ I +N+++S  ++ 
Sbjct: 64  QIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQR 123

Query: 60  CQSGPALKLFDRLRYQ----GLRPDAFTFSSLVKA-CGSLQENEIVHGVCL----KLGFS 110
             +    +LF  ++       L+P+ +TF SL+ A C S+     + G  L    K G  
Sbjct: 124 GDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLL 183

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
           + +Y+ S     +++ G    A   F      + V+   ++ G V     +++ EVF E 
Sbjct: 184 ANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKET 243

Query: 171 RSLGLELNEFSLTAVLGASFDV-------KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           R L +++N  S   +L A  +        ++G ++HG+ ++ G L+     + N ++N+Y
Sbjct: 244 RHL-VDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTG-LNDAKVAVGNGLINMY 301

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-------LRFNDFQINE 276
            +CG    A  +F  + + D VSW+  I     G++    F+D       +R      + 
Sbjct: 302 AKCGDIDHARSVFGLMVDKDSVSWNSMIT----GLDQNKCFEDAVKSYNSMRKTGLMPSN 357

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +T+I+ LSS      +  G+Q      K+G    VS+ N L+++Y + G + + + +F +
Sbjct: 358 FTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSW 417

Query: 337 LIFKDSVSWNSMIAGYSENGF-FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
           ++ +D VSWN++I   +++G   ++A+++F  M+     PN  T  ++L  VS+  + K 
Sbjct: 418 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 477

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLV 454
           + Q+H+ I+K     D+++ + L+  YGK   +   + + S + ++++ V  N++ S  +
Sbjct: 478 SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYI 537

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
           +     +A++L   +    + ++  TF+ VL ACA +  LE+G  +H  A++A  + D+ 
Sbjct: 538 HNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVV 597

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           + SA++DMY KCG I+ A R F  +   +L  WN+M+ GYA+HG       LF +M   G
Sbjct: 598 IGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSG 657

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
             PD IT++ VL++C H GLV E   Y   M++++GL+P++EHY+C+VDLLGR G L+  
Sbjct: 658 QLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKI 717

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGN---IDLGLLAGSKLLELQPDN 680
              I++MPI P+  IW+++L AC   GN    +LG  A   L  + P N
Sbjct: 718 DNFINKMPIKPNILIWRTVLGACC-RGNGRKTELGRRAAEMLFNMDPQN 765



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 177/675 (26%), Positives = 325/675 (48%), Gaps = 36/675 (5%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG-----SLQEN 97
           +R+ +T+  LISG  +      A  +   + ++G  P+ F F S ++AC       LQ  
Sbjct: 3   DRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQLG 62

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKS-GEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
             +HG+ LK  +++   L +  I  Y K  G I  A   F +    +++ + ++V  Y  
Sbjct: 63  MQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQ 122

Query: 157 NGEFDKSKEVFVEMR----SLGLELNEFSLTAVLGAS-FDVKEG----EQIHGFGVKVGF 207
            G+     E+F  M+     L L+ NE++  +++ A+   V  G     QI     K G 
Sbjct: 123 RGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGL 182

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLF 264
           L+ +  ++ +A+   + R G    A K+F+++T  + VS +  +        G EA  +F
Sbjct: 183 LANL--YVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVF 240

Query: 265 KDLR-FNDFQINEYTMINLLSSVGGERIL----RAGKQIQAFCYKVGFMEV-VSIGNALI 318
           K+ R   D  ++ Y +  LLS+     +L    R G+++  +  + G  +  V++GN LI
Sbjct: 241 KETRHLVDINVDSYVI--LLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLI 298

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +MY KCG ++ ARS+F  ++ KDSVSWNSMI G  +N  F  A+  +  M +  L+P+ +
Sbjct: 299 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 358

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+ S L + ++   +    Q H   IK G  +D S+ + L+  Y +   L E ++V S +
Sbjct: 359 TLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWM 418

Query: 439 DKKNAVHINALASVLVYASCH-AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
            +++ V  N +   L  +    +EA+E++  +  +    N  TF  +L   ++++  +  
Sbjct: 419 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 478

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYA 555
             IH L LK     D  +E+A++  Y K G +E+ +  F ++   RD ++ WN+M+ GY 
Sbjct: 479 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS-WNSMISGYI 537

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            +    +  +L   M + G + D  T+  VL++C     +       +C +    L   +
Sbjct: 538 HNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHAC-AIRACLESDV 596

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS--ACTIYGNIDLGLLAGSKL 673
              + +VD+  + G ++ A    + MP+  + + W S++S  A   YG+  L L    KL
Sbjct: 597 VIGSALVDMYSKCGRIDYASRFFNLMPM-RNLYSWNSMISGYARHGYGDNALRLFTRMKL 655

Query: 674 LELQPDNESTYVLLS 688
               PD+ +   +LS
Sbjct: 656 SGQLPDHITFVGVLS 670



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 115/492 (23%), Positives = 222/492 (45%), Gaps = 33/492 (6%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           LI+ + K  D   A        ++D +++N++I+GL +      A+K ++ +R  GL P 
Sbjct: 297 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 356

Query: 81  AFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            FT  S + +C SL      +  HG  +KLG    V + +  +  YA++G +   +  F 
Sbjct: 357 NFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFS 416

Query: 138 DCLDLDNVAYTAMVCGYVWNG-EFDKSKEVFVEMRSLGLELNEFS---LTAVLGASFDVK 193
             L+ D V++  ++     +G    ++ EVF+EM   G   N  +   L A + +    K
Sbjct: 417 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 476

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP-DVVSWSERIA 252
              QIH   +K        N + NA++  Y + G+  +  ++F  ++E  D VSW+  I+
Sbjct: 477 LSHQIHALILKYNVKDD--NAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 534

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                    +A  L   +     +++ +T   +LS+      L  G ++ A   +     
Sbjct: 535 GYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLES 594

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V IG+AL+ MY KCG+++ A   F+ +  ++  SWNSMI+GY+ +G+ + AL +F  M 
Sbjct: 595 DVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMK 654

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNAL 428
               +P+  T   +L A S+   + +  +    + +  G +      SC++   G+   L
Sbjct: 655 LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGEL 714

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++    ++++  K  + I                   +RT+ G+C   NG    +  +A 
Sbjct: 715 DKIDNFINKMPIKPNILI-------------------WRTVLGACCRGNGRKTELGRRAA 755

Query: 489 AAMTDLEQGKAI 500
             + +++   A+
Sbjct: 756 EMLFNMDPQNAV 767


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 184/550 (33%), Positives = 297/550 (54%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  R G+QI     K+G+   + +  +LISMY + G++ DAR +FD             
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G   +AL++F  M++ ++ P+ 
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM S++ A + S S++   QVHS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  +E G
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 340

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +      +++IDMY KCG IE A++ F  I   SL+ WNAM+ G+
Sbjct: 341 RWIHVYINKRLKGVANASSH-RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGF 399

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG  +   ++F++M K  ++PD+IT++ +L++C H+G++   R     M + + + P+
Sbjct: 400 AMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 459

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC ++GN++LG      L+
Sbjct: 460 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 519

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P N  +YVLLSN+YA+AG WN+V K+R  + +K + K PG S I +    H F  GD
Sbjct: 520 KIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 579

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 580 KFHPRNREIY 589



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 243/545 (44%), Gaps = 84/545 (15%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  ++   ++S    F     A       Q  +++ +N +  G 
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLS--PHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       AL L+  +   GL P+ +TF  L+K+C    + +E + +HG  LKLG+   +
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           Y+ +  I  Y ++G +  A   F      D V+YTA++ GY                   
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G   ++ E+F EM    +  +E ++ +V+ A   S  ++ G Q+H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF S +   + NA+++LY++CG+   A  +F+ ++  DV+SW+  I        
Sbjct: 244 SWIDDHGFGSNL--KIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K   G     S  
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A+ +FD ++ +   SWN+MI G++ +G  N A D+F  M +  + 
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P+  T   +L A S+S  L     +  HI +S                     + E  ++
Sbjct: 422 PDDITFVGLLSACSHSGML----DLGRHIFRS---------------------MKEDYKI 456

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             +++     H   +  +L ++    EA E+  T+     E +G  +  +LKAC    ++
Sbjct: 457 TPKLE-----HYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNV 508

Query: 495 EQGKA 499
           E G++
Sbjct: 509 ELGES 513



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 238/551 (43%), Gaps = 87/551 (15%)

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDLDNVAYTAMVCGY 154
            ++H   +K G  +  Y +S  IE    S     +  A   F    + + + +  M  G+
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGV 211
             + +   +  ++V M SLGL  N ++   +L +   S   +EG+QIHG  +K+G+   +
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 212 CNHLNNAIMNLYVRCGQKLDA-------------------------------VKMFDEIT 240
             +++ +++++YV+ G+  DA                                KMFDEI 
Sbjct: 124 --YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181

Query: 241 EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             DVVSW+  I   A   +  EA  LFK++   + + +E TM++++S+      +  G+Q
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + ++    GF   + I NALI +Y KCG+V  A  +F+ L +KD +SWN++I GY+    
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK--SGFLLDDSMI 415
           + +AL +F  ML     PN  TM SIL A ++  +++    +H +I K   G     S  
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + LI  Y KC  +  +++V   I  ++    NA+            A +++  +  +  E
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  TF  +L AC+    L+ G+ I                                   
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHI----------------------------------- 446

Query: 536 FRKICRD-----SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           FR +  D      L  +  M+      G + E   + N M    ++PD + + ++L +C 
Sbjct: 447 FRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACK 503

Query: 591 HAGLVREARTY 601
             G V    +Y
Sbjct: 504 MHGNVELGESY 514



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 46/400 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  ++K G+ LD  + T+LIS + +      A +    + +RD+++Y ALI+G A   
Sbjct: 109 QIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKG 168

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF  +    +RPD  T  S+V 
Sbjct: 169 YIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVS 228

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC    S++    VH      GF S + +V+  I+ Y K GE+ +A   F      D ++
Sbjct: 229 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 288

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +  ++ GY     + ++  +F EM   G   N+ ++ ++L A      ++ G  IH +  
Sbjct: 289 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN 348

Query: 204 KVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGV 258
           K   L GV N  ++  +++++Y +CG    A ++FD I    + SW+  I   A      
Sbjct: 349 KR--LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRAN 406

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGNAL 317
            AF +F  +R N+ + ++ T + LLS+     +L  G+ I ++          +     +
Sbjct: 407 AAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCM 466

Query: 318 ISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENG 356
           I + G  G   +A  + + + +  D V W S++     +G
Sbjct: 467 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 170/523 (32%), Positives = 294/523 (56%), Gaps = 10/523 (1%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD++  P V  W+  I          +A  ++  ++      + +T  +LL + GG
Sbjct: 72  ARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGG 131

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWN 346
              L+ G+ + A  +++GF   V + N LI++Y KC ++  AR++F+ L   +   VSW 
Sbjct: 132 LSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWT 191

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           ++++ Y++NG   +AL++F  M +  + P+   + S+L A +  + L+Q   +H+ ++K 
Sbjct: 192 AIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM 251

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G   +  ++  L T Y KC  +  +K +  ++   N +  NA+ S         +A++L+
Sbjct: 252 GLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLF 311

Query: 467 RTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
             +    ++V   T SI   + ACA +  LEQ + +     ++ Y  D+F+ SA+IDM+ 
Sbjct: 312 HEMIN--KDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFA 369

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG++E A+  F +     +  W+AM++GY  HG   E  +L+  M + GV P+++T+L 
Sbjct: 370 KCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLG 429

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L +C H+G+VRE   + + M+D H + PQ +HYACI+DLLGR G L+ A   I  MP+ 
Sbjct: 430 LLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQ 488

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
           P   +W +LLSAC  + +++LG  A  +L  + P N   YV LSNLYA+A +W+ V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             MKEK L K+ G SW+ V G    F  GD SH + +EI +++
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQV 591



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 223/447 (49%), Gaps = 15/447 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ L+  G      L T LI   + + D   A +   D     +  +NA+I G +R  
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               AL ++ +++   + PD+FTF  L+KACG    LQ    VH    +LGF + V++ +
Sbjct: 99  HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           G I  YAK   +  A   F + L L     V++TA+V  Y  NGE  ++ E+F +MR + 
Sbjct: 159 GLIALYAKCRRLGCARTVF-EGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 175 LELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ +  +L +VL A     D+++G  IH   +K+G  +     L  ++  +Y +CGQ   
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE--PDLLISLNTMYAKCGQVAT 275

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +FD++  P+++ W+  I+  A +G   +A  LF ++   D + +  ++ + +S+   
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L   + +  +  +  + + V I +ALI M+ KCG V  ARS+FD  + +D V W++M
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY  +G   +A+ ++  M    + PN  T   +L A ++S  +++     + +     
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKI 455

Query: 409 LLDDSMISCLITTYGKCNALNESKRVL 435
                  +C+I   G+   L+++  V+
Sbjct: 456 NPQQQHYACIIDLLGRAGHLDQAYEVI 482



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/491 (23%), Positives = 229/491 (46%), Gaps = 12/491 (2%)

Query: 76  GLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           G+  D+F ++SL+ +     +   +H   L LG     +L++  I   +  G+I  A   
Sbjct: 17  GIHSDSF-YASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQV 75

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDV 192
           F D        + A++ GY  N  F  +  ++ +M+   +  + F+   +L   G    +
Sbjct: 76  FDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHL 135

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD--VVSWSER 250
           + G  +H    ++GF + V   + N ++ LY +C +   A  +F+ +  P+  +VSW+  
Sbjct: 136 QMGRFVHAQVFRLGFEADV--FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAI 193

Query: 251 IAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           ++A     + VEA  +F  +R  D + +   ++++L++    + L  G+ I A   K+G 
Sbjct: 194 VSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGL 253

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +  +L +MY KCGQV  A+ +FD +   + + WN+MI+GY++NGF   A+D+F  
Sbjct: 254 ETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHE 313

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M+   + P+  ++ S + A +   SL+QA  +  ++ +S +  D  + S LI  + KC +
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGS 373

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           +  ++ V      ++ V  +A+           EA+ LYR +       N  TF  +L A
Sbjct: 374 VECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIA 433

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAG 546
           C     + +G          + +      + +ID+  + G ++ A    + +  +  +  
Sbjct: 434 CNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493

Query: 547 WNAMMMGYAQH 557
           W A++    +H
Sbjct: 494 WGALLSACKKH 504



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 174/372 (46%), Gaps = 10/372 (2%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +QI A    +G      +   LI      G +  AR +FD L       WN++I GYS N
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             F  AL M+  M    + P+ +T   +L+A      L+    VH+ + + GF  D  + 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 416 SCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + LI  Y KC  L  ++ V     + ++  V   A+ S         EALE++  +    
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            + +      VL A   + DLEQG++IH   +K   + +  +  ++  MY KCG +  AK
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F K+   +L  WNAM+ GYA++G   +  +LF++M    V+PD I+  + +++C   G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVG 337

Query: 594 LVREAR---TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
            + +AR    Y+S  SD       +   + ++D+  + G +E A+   D+  +  D  +W
Sbjct: 338 SLEQARWMDEYVS-RSDYRD---DVFISSALIDMFAKCGSVECARSVFDRT-LDRDVVVW 392

Query: 651 QSLLSACTIYGN 662
            +++    ++G 
Sbjct: 393 SAMIVGYGLHGQ 404



 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 81/175 (46%), Gaps = 16/175 (9%)

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           F+ + +I      G I  A++ F  + R  +  WNA++ GY+++  + +   +++KM   
Sbjct: 54  FLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLA 113

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI------VDLLGR 627
            V PD  T+  +L +C   GL     ++L     +H  + +L   A +      + L  +
Sbjct: 114 RVSPDSFTFPHLLKAC--GGL-----SHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAK 166

Query: 628 VGLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYGNI--DLGLLAGSKLLELQPD 679
              L  A+   + +P+P    + W +++SA    G     L + +  + ++++PD
Sbjct: 167 CRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPD 221


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 216/678 (31%), Positives = 352/678 (51%), Gaps = 21/678 (3%)

Query: 88  VKACGSLQENEIVHGV-CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           ++ACG     +  HG   L+LG +    LV        + GE   A   F    + D  +
Sbjct: 114 LRACG---HADAAHGTFGLRLGNAMLSMLV--------RFGETWHAWKVFAKMPERDVFS 162

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
           +  MV GY   G  +++ +++  M   G   + ++   VL   G   D+  G ++H   +
Sbjct: 163 WNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVL 222

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---A 260
           + G   GV   + NA++ +Y +CG    A K+FD ++  D +SW+  IA   +  E    
Sbjct: 223 RFGL--GVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAG 280

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             LF  +  ++ + N  T+ ++  + G    L   K+I A   K GF   V+  N+LI M
Sbjct: 281 LELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQM 340

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y   G++ +A ++F  +  +D++SW +MI+GY +NGF ++AL+++  M   ++ P+  T+
Sbjct: 341 YSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTV 400

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           AS L A ++   L   +++H      GF+    + + L+  Y K   + ++  V   +  
Sbjct: 401 ASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPD 460

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           K+ +  +++ +   +   + EAL  +R +    +  N  TF   L ACAA   L  GK I
Sbjct: 461 KDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKP-NSVTFIAALAACAATGSLRCGKEI 519

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H   L+     + +V +A++D+Y KCG    A   F       +  WN M+ G+  HG  
Sbjct: 520 HAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHG 579

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
               + FN+M + G  PDE+T++A+L  C  AG+V +       M++ + ++P L+HYAC
Sbjct: 580 DIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYAC 639

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           +VDLL RVG L      I++MPI PDA +W +LL+ C I+ NI+LG LA   +LEL+P++
Sbjct: 640 MVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPND 699

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
              +VLLS+LYA AGMW +V K+RK M+ K L  + G SW+ V G  H F   D SH Q 
Sbjct: 700 AGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQI 759

Query: 741 KEIYKELIKLYEHMVATA 758
           KEI   L  +YE M A+ 
Sbjct: 760 KEINDVLDGIYERMKASG 777



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/554 (24%), Positives = 260/554 (46%), Gaps = 18/554 (3%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   ++S   +F +   A++       RD+ ++N ++ G  +      AL L+ R+ + G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 77  LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            RPD +TF  ++++CG + +      VH   L+ G    V +++  +  YAK G++ +A 
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---F 190
             F      D +++ AM+ G+  N E +   E+F+ M    +E N  ++T+V  AS    
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D+   ++IH   VK GF + V     N+++ +Y   G+  +A  +F  +   D +SW+  
Sbjct: 311 DLDFAKEIHALAVKRGFATDVA--FCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAM 368

Query: 251 IAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G   +A  ++  +  N+   ++ T+ + L++      L  G ++       GF
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF 428

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           +  + + NAL+ MY K   +  A  +F Y+  KD +SW+SMIAG+  N    +AL  F H
Sbjct: 429 IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRH 488

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN  T  + L A + + SL+   ++H+H+++ G   +  + + L+  Y KC  
Sbjct: 489 MLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ 547

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLK 486
              +         K+ V  N + +  V A  H + AL  +  +  +    +  TF  +L 
Sbjct: 548 TGYAWAQFGAHGTKDVVSWNIMLAGFV-AHGHGDIALSFFNEMLETGEHPDEVTFVALLC 606

Query: 487 ACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK--ICRDS 543
            C+    + QG +  H +  K     ++   + ++D+  + G + +      +  I  D+
Sbjct: 607 GCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDA 666

Query: 544 LAGWNAMMMGYAQH 557
            A W A++ G   H
Sbjct: 667 -AVWGALLNGCRIH 679



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 208/443 (46%), Gaps = 19/443 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           ++++ +++ G  ++  +   L++ + K  D   A R +FD  +  D I++NA+I+G    
Sbjct: 216 EVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA-RKVFDGMSLTDCISWNAMIAGHFEN 274

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +    L+LF  +    + P+  T +S+  A G L + +    +H + +K GF++ V   
Sbjct: 275 HECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFC 334

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+  G +  A   F      D +++TAM+ GY  NG  DK+ EV+  M    + 
Sbjct: 335 NSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVS 394

Query: 177 LNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            ++ ++             DV  G ++H      GF+  +   + NA++ +Y +      
Sbjct: 395 PDDVTVASALAACASLGRLDV--GIKLHELATSKGFIRYIV--VANALVEMYAKSKIIEK 450

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+++F  + + DV+SWS  IA  C      EA   F+ +   D + N  T I  L++   
Sbjct: 451 AIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAA 509

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              LR GK+I A   + G      + NAL+ +Y KCGQ   A + F     KD VSWN M
Sbjct: 510 TGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIM 569

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSG 407
           +AG+  +G  + AL  F  MLE    P+  T  ++L   S +  + Q  ++ HS   K  
Sbjct: 570 LAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYS 629

Query: 408 FLLDDSMISCLITTYGKCNALNE 430
            + +    +C++    +   L E
Sbjct: 630 IVPNLKHYACMVDLLSRVGRLTE 652



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/364 (21%), Positives = 160/364 (43%), Gaps = 18/364 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L +K G   D     +LI  ++       A       + RD +++ A+ISG  +  
Sbjct: 317 EIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNG 376

Query: 61  QSGPALKLFDRLRYQGLRPDAFTF---SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL+++  +    + PD  T     +   + G L     +H +    GF   + + +
Sbjct: 377 FPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +E YAKS  I  A   F+   D D +++++M+ G+ +N    K+ E     R +  ++
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFN---HKNFEALYYFRHMLADV 493

Query: 178 NEFSLTAV-----LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
              S+T +       A+  ++ G++IH   ++ G  S    ++ NA+++LYV+CGQ   A
Sbjct: 494 KPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASE--GYVPNALLDLYVKCGQTGYA 551

Query: 233 VKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F      DVVSW+  +A   A   G  A   F ++       +E T + LL      
Sbjct: 552 WAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRA 611

Query: 290 RILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNS 347
            ++  G ++  +   K   +  +     ++ +  + G++ +  +  + + I  D+  W +
Sbjct: 612 GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGA 671

Query: 348 MIAG 351
           ++ G
Sbjct: 672 LLNG 675


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/639 (30%), Positives = 327/639 (51%), Gaps = 13/639 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +E +   G++  A   F      D  AY A++  Y W G F  + +++  M    +  N+
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 180 FSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           ++   VL    A  D++ G  IH      G  + +   ++ A+++LY+RC +   A  +F
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDL--FVSTALIDLYIRCARFGPARNVF 158

Query: 237 DEITEPDVVSWSERIAA-ACDGVEAFGLFKDLRFND---FQINEYTMINLLSSVGGERIL 292
            ++   DVV+W+  +A  A  G+    +   L   D    + N  T+++LL  +     L
Sbjct: 159 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGAL 218

Query: 293 RAGKQIQAFCYKVGFM---EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             G  I A+C +       E V IG AL+ MY KC Q+  A  +F  +  ++ V+W+++I
Sbjct: 219 FQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALI 278

Query: 350 AGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            G+       +A ++F  ML   L   +  ++AS L   ++   L    Q+H+ I KSG 
Sbjct: 279 GGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D +  + L++ Y K   +NE+     EI  K+ +   AL S  V      EA  +++ 
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKK 398

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     E + +T   ++ AC+ +  L+ GK  H   +      +  + +++IDMY KCG 
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGK 458

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I+ +++ F K+    +  WN M+ GY  HG   E + LF  M   G  PD++T++ ++ +
Sbjct: 459 IDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAA 518

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GLV E + +   M+  +G++P++EHY C+VDLL R GLL+ A   I  MP+  D  
Sbjct: 519 CSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVR 578

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL AC I+ NIDLG      + +L P+    +VLLSN++++AG +++  ++R   K
Sbjct: 579 VWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQK 638

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            K   K PGYSWI + G  H F  GD SH  S++IY EL
Sbjct: 639 VKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHEL 677



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 258/600 (43%), Gaps = 68/600 (11%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK-L 68
           G H D  +ST LI  + + A F  A         RD++ +NA+++G A       A+  L
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 69  FDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS---RVYLVSGFIEN 122
            D   + GLRP+A T  SL+      G+L +   +H  CL+        +V + +  ++ 
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFS 181
           YAK  ++V A   F      ++V ++A++ G+V      ++  +F +M   GL  L+  S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + + L    +  D+  G Q+H    K G  + +    +N+++++Y + G   +A   FDE
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLT--ASNSLLSMYAKAGLINEATMFFDE 367

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D +S+   ++         EAF +FK ++  + + +  TM++L+ +      L+ G
Sbjct: 368 IAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHG 427

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           K         G     SI N+LI MY KCG+++ +R +FD +  +D VSWN+MIAGY  +
Sbjct: 428 KCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIH 487

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSM 414
           G   +A  +F  M      P+  T   ++ A S+S  + +       +  K G L     
Sbjct: 488 GLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEH 547

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
             C++    +   L+E+ + +  +  K  V                        +WG+  
Sbjct: 548 YICMVDLLARGGLLDEAYQFIQSMPLKADVR-----------------------VWGA-- 582

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--------QDIFVESAVIDMYCKC 526
                    +L AC    +++ GK +  +  K   +         +IF  +   D   + 
Sbjct: 583 ---------LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 633

Query: 527 GTIEDAKRAFRKICRDSLAGWN----AMMMGYAQHGC----YHEVSNLFNKMSKFGVKPD 578
             I+  K  F+K    S    N    A + G   H C    YHE+ N+   + K G + D
Sbjct: 634 RIIQKVK-GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQAD 692



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 237/518 (45%), Gaps = 28/518 (5%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS- 93
           R +FD     D   YNALI   +       A+ L+  +    + P+ +TF  ++KAC + 
Sbjct: 54  RQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSAL 113

Query: 94  --LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
             L+    +H      G  + +++ +  I+ Y +      A   F      D VA+ AM+
Sbjct: 114 VDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAML 173

Query: 152 CGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVL------GASFDVKEGEQIHGFGVK 204
            GY  +G +  +    ++M+   GL  N  +L ++L      GA F   +G  IH + ++
Sbjct: 174 AGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF---QGTSIHAYCLR 230

Query: 205 VGFLSGVCNHL-NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDGV-EA 260
                     L   A++++Y +C Q + A ++F  +   + V+WS  I     CD + EA
Sbjct: 231 ACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEA 290

Query: 261 FGLFKDLRFNDF-QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           F LFKD+       ++  ++ + L        L  G Q+ A   K G    ++  N+L+S
Sbjct: 291 FNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLS 350

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY K G +N+A   FD +  KD++S+ ++++G  +NG   +A  +F  M   ++ P+  T
Sbjct: 351 MYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIAT 410

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           M S++ A S+  +L+     H  +I  G  L+ S+ + LI  Y KC  ++ S++V  ++ 
Sbjct: 411 MVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP 470

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK- 498
            ++ V  N + +         EA  L+  +       +  TF  ++ AC+    + +GK 
Sbjct: 471 ARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH 530

Query: 499 ----AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
                 H   +  R +  I     ++D+  + G +++A
Sbjct: 531 WFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEA 564



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 18/265 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L+ K+G H D   S +L+S + K      A  F  +   +D I+Y AL+SG  +  
Sbjct: 328 QLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNG 387

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A  +F +++   + PD  T  SL+ AC    +LQ  +  HG  +  G +    + +
Sbjct: 388 KAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN 447

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G+I  +   F      D V++  M+ GY  +G   ++  +F+ M++ G   
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAP 507

Query: 178 NEFSLTAVLGA---SFDVKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           ++ +   ++ A   S  V EG+       H +G+       +C      +++L  R G  
Sbjct: 508 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYIC------MVDLLARGGLL 561

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A +    +  + DV  W   + A
Sbjct: 562 DEAYQFIQSMPLKADVRVWGALLGA 586


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 203/674 (30%), Positives = 340/674 (50%), Gaps = 26/674 (3%)

Query: 93  SLQENEIVHGVCLKLGFSSR-----VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           SL +  +VH   L      R       L +  I  Y + G   SA + F   LD + V++
Sbjct: 57  SLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSW 116

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVK 204
            A++  +  N     +  +F  M   G   ++F+L + + A  ++ +   G Q+H   +K
Sbjct: 117 AAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIK 176

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AF 261
             + SG    + NA++ +Y + G   D   +F+ I + D++SW   IA  A  G E  A 
Sbjct: 177 --WESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDAL 234

Query: 262 GLFKDL------RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
            +F+++        N+F     ++    S V     L  G+QI     K         G 
Sbjct: 235 QIFREMIAEGVHHPNEFHFG--SVFRACSVVVNS--LEYGEQIHGVSVKYQLDRNSYAGC 290

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           +L  MY +C +++ AR +F  +   D VSWNS+I  +S  G  ++A+ +F  M +  L P
Sbjct: 291 SLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP 350

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +G T+ ++L A     +L Q   +HS+++K G   D  + + L++ Y +C   + +  V 
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVF 410

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            E   ++ V  N++ +  V      +  +L+  +  S   ++  + + VL A A +   E
Sbjct: 411 HETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFE 470

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMG 553
             K +H  A K     D  + + +ID Y KCG+++DA + F  +   RD  + W+++++G
Sbjct: 471 MVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFS-WSSLIVG 529

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           YAQ G   E  +LF +M   GVKP+ +T++ VLT+C   GLV E   Y S M   +G++P
Sbjct: 530 YAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVP 589

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EH +C++DLL R G L  A   +DQMP  PD  +W++LL+A   + ++D+G  A   +
Sbjct: 590 TREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGV 649

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           L + P + + YVLL N+YAS+G WN+  +L+K+M+   + K PG SWI + G    F   
Sbjct: 650 LNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVE 709

Query: 734 DSSHSQSKEIYKEL 747
           D SH +S EIY  L
Sbjct: 710 DRSHPESDEIYTML 723



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 226/452 (50%), Gaps = 17/452 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++  IK     D I+   L++ ++K       F      +++D+I++ ++I+GLA+  
Sbjct: 169 QVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQG 228

Query: 61  QSGPALKLFDRLRYQGL-RPDAFTFSSLVKACG----SLQENEIVHGVCLKLGFSSRVYL 115
           +   AL++F  +  +G+  P+ F F S+ +AC     SL+  E +HGV +K       Y 
Sbjct: 229 REMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYA 288

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
                + YA+  E+ SA   F      D V++ +++  +   G   ++  +F EMR  GL
Sbjct: 289 GCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGL 348

Query: 176 ELNEFSLTAVLGA--SFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +  ++ A+L A   +D + +G  IH + VK+G    V   ++N+++++Y RC     A
Sbjct: 349 RPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVI--VSNSLLSMYARCLDFSSA 406

Query: 233 VKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           + +F E  + DVV+W+  + A        + F LF  L  +   ++  ++ N+LS+    
Sbjct: 407 MDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAEL 466

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSM 348
                 KQ+ A+ +KVG +    + N LI  Y KCG ++DA  +F+ +   +D  SW+S+
Sbjct: 467 GYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSL 526

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-- 406
           I GY++ G+  +ALD+F  M    + PN  T   +L A S    + +    +S I+K   
Sbjct: 527 IVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYS-IMKPEY 585

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           G +      SC++    +   L+E+ + + ++
Sbjct: 586 GIVPTREHCSCVLDLLARAGRLSEAAKFVDQM 617



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 256/538 (47%), Gaps = 23/538 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRL 72
           + ILS  LI+ + +      A R +FD   +R+ +++ A+I+  A+  +   A+ LF  +
Sbjct: 81  NTILSNHLITMYGRCGAPDSA-RVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM 139

Query: 73  RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
              G  PD F   S + AC   G L     VH   +K    S + + +  +  Y+KSG +
Sbjct: 140 LRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSV 199

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVLGA 188
                 F    D D +++ +++ G    G    + ++F EM + G+   NEF   +V  A
Sbjct: 200 GDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRA 259

Query: 189 SFDV----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
              V    + GEQIHG  VK        ++   ++ ++Y RC +   A K+F  I  PD+
Sbjct: 260 CSVVVNSLEYGEQIHGVSVKYQLDRN--SYAGCSLSDMYARCNELDSARKVFYRIESPDL 317

Query: 245 VSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  I A +  G+  EA  LF ++R +  + +  T++ LL +  G   L  G+ I ++
Sbjct: 318 VSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSY 377

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K+G    V + N+L+SMY +C   + A  +F     +D V+WNS++    ++      
Sbjct: 378 LVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDV 437

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             +F  +       +  ++ ++L A +     +   QVH++  K G + D  + + LI T
Sbjct: 438 FKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDT 497

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLV-YASC--HAEALELYRTIWGSCREVNG 478
           Y KC +L+++ ++   +     V   + +S++V YA      EAL+L+  +     + N 
Sbjct: 498 YAKCGSLDDANKLFEIMGTGRDVF--SWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNH 555

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
            TF  VL AC+ +  +++G   + + +K  Y      E  S V+D+  + G + +A +
Sbjct: 556 VTFVGVLTACSRVGLVDEGCYYYSI-MKPEYGIVPTREHCSCVLDLLARAGRLSEAAK 612



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 167/369 (45%), Gaps = 26/369 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ + +K     +     +L   + +  +   A +  +  ++ D++++N+LI+  +   
Sbjct: 272 QIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKG 331

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF  +R  GLRPD  T  +L+ AC    +L +   +H   +KLG    V + +
Sbjct: 332 LLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSN 391

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+  +  SA   F +  D D V + +++   V +   +   ++F  +      L
Sbjct: 392 SLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSL 451

Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  SL  VL AS ++   E   Q+H +  KVG +      L+N +++ Y +CG   DA K
Sbjct: 452 DRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAM--LSNGLIDTYAKCGSLDDANK 509

Query: 235 MFDEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F+ + T  DV SWS  I          EA  LF  +R    + N  T + +L++     
Sbjct: 510 LFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVG 569

Query: 291 ILRAGKQIQAFCY-------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DS 342
           ++  G      CY       + G +      + ++ +  + G++++A    D + F+ D 
Sbjct: 570 LVDEG------CYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDI 623

Query: 343 VSWNSMIAG 351
           + W +++A 
Sbjct: 624 IMWKTLLAA 632



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 9/261 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S L+K G   D I+S +L+S + +  DF  A     +T +RD++T+N++++   +   
Sbjct: 374 IHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQH 433

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
                KLF  L       D  + ++++ A   L   E+   VH    K+G      L +G
Sbjct: 434 LEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNG 493

Query: 119 FIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            I+ YAK G +  A   F       D  ++++++ GY   G   ++ ++F  MR+LG++ 
Sbjct: 494 LIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKP 553

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL A      V EG   +        +     H  + +++L  R G+  +A K
Sbjct: 554 NHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHC-SCVLDLLARAGRLSEAAK 612

Query: 235 MFDEIT-EPDVVSWSERIAAA 254
             D++  EPD++ W   +AA+
Sbjct: 613 FVDQMPFEPDIIMWKTLLAAS 633



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 488 CAAMTDLEQGKAI--HCLALKAR---YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
           C+ +  L QG+ +  H LA  AR      +  + + +I MY +CG  + A+  F  +   
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           +   W A++  +AQ+    +   LF+ M + G  PD+    + + +C   G
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELG 162


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 213/687 (31%), Positives = 350/687 (50%), Gaps = 14/687 (2%)

Query: 80  DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           DA     L++A     SL++ +++H   + LG  + VY+    I  Y        A+  F
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61

Query: 137 RDCLDLDNVAY-TAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGASFDVKE 194
               +   ++    ++ GY  N  +D++  +F ++     L+ + ++  +VL A   ++ 
Sbjct: 62  DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR 121

Query: 195 ---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
              G+ IH   VK G +  +   + ++++ +Y +C +   AVK+FDE+ + DV  W+  I
Sbjct: 122 VVLGQMIHTCLVKEGLMVDIV--VGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVI 179

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         EA   F  +R   F+ +  T+   +SS      L  G++I       GF 
Sbjct: 180 SCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFR 239

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               +  AL+ MYGKCGQ+  A  +F+ +  K  V+WNSMI GY   G     + +F  M
Sbjct: 240 MDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRM 299

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               + P   T+ S L A S S  L +   VH +II++    D  + S L+  Y KC  +
Sbjct: 300 YSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKV 359

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             ++ +   + K   V  N + S  V      +AL L+  +  S  E +  TF+ VL AC
Sbjct: 360 ESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAAC 419

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           + +  LE+G+ IH L ++     +  V  A++DMY KCG +E+A   F+ +    L  W 
Sbjct: 420 SQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWT 479

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +M+  Y  HG  +E   LF +M +  VKPD +T+LA+L++C HAGLV +   + + M ++
Sbjct: 480 SMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINV 539

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP-IPPDAHIWQSLLSACTIYGNIDLGL 667
           +G+IP++EHY+C++ LLGR G L  A   +   P I  D  +  +L SAC ++ N+DLG+
Sbjct: 540 YGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGV 599

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
                L++  PD+ STY++LSN+YAS G W++V  +R +MK+  L K PG SWI +    
Sbjct: 600 EIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKI 659

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
             F+  D+SH   + I   L  L  HM
Sbjct: 660 VPFFVEDNSHYHLEGIGNILSYLTSHM 686



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 223/450 (49%), Gaps = 12/450 (2%)

Query: 50  NALISGLARFCQSGPALKLFDRLR-YQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCL 105
           N L++G  R C    AL LFD+L  Y  L+PD++T+ S++KACG L+     +++H   +
Sbjct: 74  NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K G    + + S  +  YAK  E   A   F +  D D   +  ++  Y  +G+F+++  
Sbjct: 134 KEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR 193

Query: 166 VFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            F  MR  G E +  ++T  + +     D+  G +IH   V  GF     + ++ A++++
Sbjct: 194 YFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMD--SFVSAALVDM 251

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTM 279
           Y +CGQ   A+++F+++    VV+W+  I       DG+    LFK +     +    T+
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTL 311

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            + L +      L  GK +  +  +      + + ++L+ +Y KCG+V  A +IF  +  
Sbjct: 312 TSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPK 371

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
             +VSWN MI+GY   G    AL +F  M +  + P+  T  S+L A S   +L++  ++
Sbjct: 372 TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREI 431

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H+ I++     ++ ++  L+  Y KC A+ E+  V   + +++ V   ++ +        
Sbjct: 432 HNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRV 491

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACA 489
            EALEL+  +  S  + +  TF  +L AC+
Sbjct: 492 YEALELFAEMLQSNVKPDRVTFLAILSACS 521



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 219/444 (49%), Gaps = 12/444 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ L+K G  +D ++ ++L+  + K  +F  A +   +  ++D+  +N +IS   +  +
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL+ F  +R  G  PD+ T ++ + +C     L     +H   +  GF    ++ + 
Sbjct: 188 FEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAA 247

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G++  A   F    +   VA+ +M+ GY + G+     ++F  M S G++  
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +LT+ L A   S  + EG+ +HG+ ++      +   LN+++M+LY +CG+   A  +
Sbjct: 308 LTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDI--FLNSSLMDLYFKCGKVESAETI 365

Query: 236 FDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  + +   VSW+  I+    +G   +A  LF ++  +  + +  T  ++L++      L
Sbjct: 366 FKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAAL 425

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G++I     +        +  AL+ MY KCG V +A  +F  L  +D VSW SMI  Y
Sbjct: 426 EKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAY 485

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLD 411
             +G   +AL++F  ML+ ++ P+  T  +IL A S++  +   +   + +I   G +  
Sbjct: 486 GSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPR 545

Query: 412 DSMISCLITTYGKCNALNESKRVL 435
               SCLIT  G+   L+E+  +L
Sbjct: 546 IEHYSCLITLLGRAGRLHEAYEIL 569



 Score = 39.3 bits (90), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/91 (20%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L+++     + ++   L+  + K      AF        RD++++ ++I+      
Sbjct: 430 EIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHG 489

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   AL+LF  +    ++PD  TF +++ AC
Sbjct: 490 RVYEALELFAEMLQSNVKPDRVTFLAILSAC 520


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 186/561 (33%), Positives = 303/561 (54%), Gaps = 7/561 (1%)

Query: 199 HGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
           H    K+   S V N ++  +++N+Y + G   DA ++FD + + +  SWS  +A     
Sbjct: 34  HALACKIP--SAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAE 91

Query: 257 --GVEAFGLFK-DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               EAF LF+  L     + +E+    +LS+V     L  G+Q+     K G ++ VS+
Sbjct: 92  KCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSV 151

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N+L++MY K G +  A  +F+    ++S++W++MI GY++NG  + A+ MF  M     
Sbjct: 152 ENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 211

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P  +T   +L A S+  +L    Q H  ++K GF +   + S L+  Y KC  + ++K 
Sbjct: 212 TPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKE 271

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              ++ + + V   A+ S  V    H EAL LY  +       + ST +  L+ACA +  
Sbjct: 272 GFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAA 331

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           LE GK +H   +K        V SA+  MY KCG +ED    FR+I    +  WN+++ G
Sbjct: 332 LEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISG 391

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           ++Q+GC +   +LF +M   G  PD IT++ +L +C H GLV     Y S M+  +GL P
Sbjct: 392 FSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTP 451

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           +L+HYAC+VD+L R G+L+ AK  I+ + I     +W+ +L AC    + D+G  AG +L
Sbjct: 452 RLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERL 511

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           +EL   + S Y+LLSN+YAS   WNDV ++R  M+ + + K+PG SW+ +    H F  G
Sbjct: 512 MELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVG 571

Query: 734 DSSHSQSKEIYKELIKLYEHM 754
           +  H +++ I  +L +L +HM
Sbjct: 572 EQQHPEAENINAQLRRLAKHM 592



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 34/470 (7%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           T+L++ + K      A R       R+  +++ +++G A    S  A  LF RL  +   
Sbjct: 51  TSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF-RLMLEECP 109

Query: 79  PDAFTFS-----SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            +   F      S V     L   E +HG+ +K G    V + +  +  YAK+G + +A 
Sbjct: 110 SEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAF 169

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F    + +++ ++AM+ GY  NGE D +  +F +M + G    EF+   VL AS D+ 
Sbjct: 170 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 229

Query: 194 E---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
               G+Q HG  VK+GF   +  ++ +A++++Y +CG   DA + FD++ E D+V W+  
Sbjct: 230 ALAVGKQAHGLMVKLGFEVQI--YVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAM 287

Query: 251 IAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           ++      +  EA  L+  +       ++ T+ + L +  G   L  GKQ+     K G 
Sbjct: 288 VSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL 347

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +G+AL +MY KCG + D  S+F  +  +D ++WNS+I+G+S+NG  N ALD+F  
Sbjct: 348 GLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEE 407

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCN 426
           M     IP+  T  +IL A S+   + +  +  S + K  G        +C++    +  
Sbjct: 408 MKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAG 467

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L E+K  +  I              + + +C      L+R + G+CR +
Sbjct: 468 MLKEAKDFIESI-------------TIDHGTC------LWRIVLGACRSL 498



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 222/493 (45%), Gaps = 32/493 (6%)

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VE 169
           S VY+ +  +  Y K G +  A   F      ++ +++ MV GY      +++ ++F + 
Sbjct: 45  SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 104

Query: 170 MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           +     E +EF  TAVL A      +  GEQ+HG  VK G L  V   + N+++ +Y + 
Sbjct: 105 LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVS--VENSLVTMYAKA 162

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLL 283
           G    A  +F+   E + ++WS  I       E   A  +F  +    F   E+T + +L
Sbjct: 163 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVL 222

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           ++      L  GKQ      K+GF   + + +AL+ MY KCG + DA+  FD L   D V
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
            W +M++G+ +NG   +AL ++  M +  +IP+  T+AS L A +   +L+   Q+H+ I
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 342

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +K G  L   + S L T Y KC  L +   V   I  ++ +  N++ S      C   AL
Sbjct: 343 VKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGAL 402

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-----ALKARYDQ-----DI 513
           +L+  +       +  TF  +L AC+ M  +++G     L      L  R D      DI
Sbjct: 403 DLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDI 462

Query: 514 ------------FVESAVIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
                       F+ES  ID   C    +  A R+ R     + AG   M +G      Y
Sbjct: 463 LSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAY 522

Query: 561 HEVSNLFNKMSKF 573
             +SN++    K+
Sbjct: 523 ILLSNIYASQRKW 535



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 158/293 (53%), Gaps = 13/293 (4%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           Q++ L++K+G  LD + +  +L++ + K      AF     ++ R+ IT++A+I+G A+ 
Sbjct: 135 QMHGLIVKDGL-LDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQN 193

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            ++  A+ +F ++   G  P  FTF  ++ A    G+L   +  HG+ +KLGF  ++Y+ 
Sbjct: 194 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK 253

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK G I  A+  F    ++D V +TAMV G+V NGE +++  ++  M   G+ 
Sbjct: 254 SALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 313

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ ++ + L A   +   + G+Q+H   VK G   G+   + +A+  +Y +CG   D +
Sbjct: 314 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL--GLGAPVGSALSTMYSKCGNLEDGM 371

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
            +F  I + DV++W+  I+       G  A  LF++++      +  T IN+L
Sbjct: 372 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL 424


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/639 (29%), Positives = 326/639 (51%), Gaps = 13/639 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +E +   G++  A   F      D  AY A++  Y W G F  + +++  M    +  N+
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 180 FSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           ++   VL A     D+  G  IH     VG  + +   ++ A+++LY+RC +   A  +F
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDL--FVSTALIDLYIRCARFGPAANVF 157

Query: 237 DEITEPDVVSWSERIAA-ACDGVEAFGLFKDLRFND---FQINEYTMINLLSSVGGERIL 292
            ++   DVV+W+  +A  A  G+    +   L   D    + N  T+++LL  +     L
Sbjct: 158 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGAL 217

Query: 293 RAGKQIQAFCYKVGF---MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             G  + A+C +       E V IG AL+ MY KC  +  A  +F  +  ++ V+W+++I
Sbjct: 218 FQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALI 277

Query: 350 AGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            G+       +A ++F  ML E     +  ++AS L   ++   L+   Q+H+ + KSG 
Sbjct: 278 GGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGI 337

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D +  + L++ Y K   +NE+  +  EI  K+ +   AL S  V      EA  +++ 
Sbjct: 338 HADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKK 397

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + + +T   ++ AC+ +  L+ G+  H   +      +  + +++IDMY KCG 
Sbjct: 398 MQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGR 457

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I+ +++ F K+    +  WN M+ GY  HG   E + LF  M   G +PD++T++ ++ +
Sbjct: 458 IDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAA 517

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GLV E + +   M+  +G++P++EHY C+VDLL R G L+ A   I  MP+  D  
Sbjct: 518 CSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVR 577

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL AC I+ NIDLG      + +L P+    +VLLSN++++AG +++  ++R   K
Sbjct: 578 VWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQK 637

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            K   K PG SWI + G  H F  GD SH  S +IY EL
Sbjct: 638 VKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHEL 676



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 234/483 (48%), Gaps = 27/483 (5%)

Query: 36  RFLFD-TQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           R +FD     D   YNALI     +   GP   A+ L+  + Y  + P+ +TF  ++KAC
Sbjct: 53  RQVFDRIPAPDARAYNALIRA---YSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKAC 109

Query: 92  GSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
            +L +      +H     +G  + +++ +  I+ Y +      A   F      D VA+ 
Sbjct: 110 SALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWN 169

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVL------GASFDVKEGEQIHGF 201
           AM+ GY  +G +  +    ++M+   GL  N  +L ++L      GA F   +G  +H +
Sbjct: 170 AMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF---QGTSVHAY 226

Query: 202 GVKVGFLSGVCNH--LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDG 257
            ++  +L        +  A++++Y +C   + A ++F  +T  + V+WS  I     CD 
Sbjct: 227 CLR-AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285

Query: 258 V-EAFGLFKDLRFNDF-QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           + EAF LFKD+       ++  ++ + L        LR G Q+ A   K G    ++ GN
Sbjct: 286 MTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           +L+SMY K G +N+A  +FD +  KD++S+ ++++GY +NG   +A  +F  M   ++ P
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +  TM S++ A S+  +L+     H  +I  G  L+ S+ + LI  Y KC  ++ S++V 
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVF 465

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            ++  ++ V  N + +         EA  L+ ++     E +  TF  ++ AC+    + 
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVT 525

Query: 496 QGK 498
           +GK
Sbjct: 526 EGK 528



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 257/602 (42%), Gaps = 72/602 (11%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL-KL 68
           G H D  +ST LI  + + A F  A         RD++ +NA+++G A       A+  L
Sbjct: 129 GLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 188

Query: 69  FDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS---RVYLVSGFIEN 122
            D     GLRP+A T  SL+      G+L +   VH  CL+        +V + +  ++ 
Sbjct: 189 LDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDM 248

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFS 181
           YAK   +V A   F      + V ++A++ G+V      ++  +F +M   G+  L+  S
Sbjct: 249 YAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + + L    +  D++ G Q+H    K G  + +     N+++++Y + G   +A  +FDE
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTA--GNSLLSMYAKAGLINEATMLFDE 366

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D +S+   ++         EAF +FK ++  + Q +  TM++L+ +      L+ G
Sbjct: 367 IAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG 426

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +         G     SI N+LI MY KCG+++ +R +FD +  +D VSWN+MIAGY  +
Sbjct: 427 RCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIH 486

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL---KQAMQVHSHIIKSGFLLDD 412
           G   +A  +F  M      P+  T   ++ A S+S  +   K      +H  K G L   
Sbjct: 487 GLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTH--KYGILPRM 544

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
               C++    +   L+E+ + +  +  K  V                        +WG+
Sbjct: 545 EHYICMVDLLARGGFLDEAYQFIQSMPLKADVR-----------------------VWGA 581

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--------QDIFVESAVIDMYC 524
                      +L AC    +++ GK +  +  K   +         +IF  +   D   
Sbjct: 582 -----------LLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAA 630

Query: 525 KCGTIEDAKRAFRKICRDSLAGWN----AMMMGYAQHGC----YHEVSNLFNKMSKFGVK 576
           +   I+  K  F+K    S    N    A + G   H C    YHE+ N+   + K G +
Sbjct: 631 EVRIIQKVK-GFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQ 689

Query: 577 PD 578
            D
Sbjct: 690 AD 691



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 18/265 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++LL K+G H D     +L+S + K      A     +   +D I+Y AL+SG  +  
Sbjct: 327 QLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNG 386

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A  +F +++   ++PD  T  SL+ AC    +LQ     HG  +  G +    + +
Sbjct: 387 KAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICN 446

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  +   F      D V++  M+ GY  +G   ++  +F+ M++ G E 
Sbjct: 447 SLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEP 506

Query: 178 NEFSLTAVLGA---SFDVKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           ++ +   ++ A   S  V EG+       H +G+       +C      +++L  R G  
Sbjct: 507 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYIC------MVDLLARGGFL 560

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A +    +  + DV  W   + A
Sbjct: 561 DEAYQFIQSMPLKADVRVWGALLGA 585


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 211/661 (31%), Positives = 335/661 (50%), Gaps = 20/661 (3%)

Query: 78  RPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG---EIVSAEM 134
           RP      + + AC S      +HG  ++   +S  ++    I   A      ++  A  
Sbjct: 14  RPIRHHLLAYLDACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARK 73

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV-- 192
            F      +   +  M+ GY        +  VF EMR  G+  + +++ AV+ AS     
Sbjct: 74  VFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAG 133

Query: 193 ----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
                 G+ IH    ++GF S V   + + ++N Y       +A K+F+E+ E DVVSW+
Sbjct: 134 LKWRSNGDAIHALVRRIGFTSDV--FVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWT 191

Query: 249 ERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I+A        +   +  +++      N+ T+I+LLS+ G  + +  G+ +     K 
Sbjct: 192 SMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF 251

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G    V I NALISMY KCG ++DA   F  +  + + SWN++I G+ +N    +AL +F
Sbjct: 252 GIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             ML   + P+G T+ S+L A +    L++ M VHS+I  +G   D+ + + LI  Y KC
Sbjct: 312 EEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKC 371

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV- 484
             +  ++RV   + KK+ V    +    V       A  L+  +     EV     ++V 
Sbjct: 372 GDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEM--KIAEVVAHEMALVS 429

Query: 485 -LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            L AC+ +  L++G+ IH    +    +D+ +ESA++DMY KCG I+ A   FRK+    
Sbjct: 430 LLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQ 489

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREARTYL 602
              WNAM+ G A +G   E   LF++M +    KPD IT  AVL +C H G+V E   Y 
Sbjct: 490 TLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF 549

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             MS L G++P  EHY CIVDLLGR G+L+ A   I +MPI P+  IW SLL+AC ++  
Sbjct: 550 YLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHR 608

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           +DLG + G  ++ + P++   +VL+SNL+A    W+DV  +R  M  + + K PG+S + 
Sbjct: 609 MDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQ 668

Query: 723 V 723
           V
Sbjct: 669 V 669



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 229/442 (51%), Gaps = 16/442 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L+ + G   D  + + L++++  F   + A +   +   RD++++ ++IS  A+   
Sbjct: 143 IHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGH 202

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
               LK+   ++ +G+ P+  T  SL+ ACG  Q   E   V+    K G  + V + + 
Sbjct: 203 WDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNA 262

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y K G +  A   F+        ++  ++ G+V N E  ++  +F EM   G+  +
Sbjct: 263 LISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPD 322

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVC--NHLNNAIMNLYVRCGQKLDAV 233
             +L +VL A     ++++G  +H + +K    +G+C  N L N+++N+Y +CG    A 
Sbjct: 323 GITLVSVLSACAQLGELRKGMHVHSY-IKD---NGICCDNILTNSLINMYAKCGDMAAAE 378

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F  +T+ DVVSW+  +     G +   AF LF++++  +   +E  +++LLS+     
Sbjct: 379 RVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLG 438

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G++I ++  ++   + + + +AL+ MY KCG ++ A  IF  +  K ++SWN+MI 
Sbjct: 439 ALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIG 498

Query: 351 GYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           G + NG+  +A+++F  MLE     P+G T+ ++L A ++   + + ++    +   G +
Sbjct: 499 GLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVV 558

Query: 410 LDDSMISCLITTYGKCNALNES 431
            D     C++   G+   L+E+
Sbjct: 559 PDTEHYGCIVDLLGRAGMLDEA 580


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/532 (35%), Positives = 286/532 (53%), Gaps = 14/532 (2%)

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMI 280
           GQ   A K+FDE   PDV  W+  I +        D VE   +++ +R+     + +T  
Sbjct: 102 GQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVE---MYRWMRWTGVHPDGFTFP 158

Query: 281 NLLSSVGGERILRAGKQ--IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
            +L +     +L  G    I     K GF   V + N L+++Y KCG +  A+ +FD L 
Sbjct: 159 YVLKAC--TELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLY 216

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +  VSW S+I+GY++NG   +AL MF  M    + P+   + SIL A ++   L+Q   
Sbjct: 217 HRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRS 276

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H  +IK G   + +++  L   Y KC  +  +K    ++   N +  NA+ S       
Sbjct: 277 IHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGH 336

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             EA+ L+  +     + +  T    + A A +  LE  + +     K+ Y  DIFV ++
Sbjct: 337 AEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTS 396

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +IDMY KCG++E A+R F +     +  W+AM+MGY  HG   E  NL++ M + GV P+
Sbjct: 397 LIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPN 456

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           ++T++ +LT+C H+GLV+E      CM D   ++P+ EHY+C+VDLLGR G L  A   I
Sbjct: 457 DVTFIGLLTACNHSGLVKEGWELFHCMKDFE-IVPRNEHYSCVVDLLGRAGYLGEACAFI 515

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
            ++PI P   +W +LLSAC IY  + LG  A +KL  L P N   YV LSNLYAS+ +W+
Sbjct: 516 MKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWD 575

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            V  +R  M+EK L K+ GYS I + G    F+ GD SH  +KEI+ EL +L
Sbjct: 576 CVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRL 627



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 226/455 (49%), Gaps = 11/455 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ L+ +G   +  L T L++  +       A +   +    D+  +NA+I   +R  
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
                ++++  +R+ G+ PD FTF  ++KAC  L +   + I+HG  +K GF S V++ +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G +  YAK G I  A++ F        V++T+++ GY  NG+  ++  +F +MR+ G++ 
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L ++L A  DV   ++G  IHGF +K+G        L  ++   Y +CG    A  
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA--LLISLTAFYAKCGLVTVAKS 311

Query: 235 MFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            FD++   +V+ W+  I+  A +G   EA  LF  +   + + +  T+ + + +      
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGS 371

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   + +  +  K  +   + +  +LI MY KCG V  AR +FD    KD V W++MI G
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G   +A++++  M +  + PN  T   +L A ++S  +K+  ++   +     +  
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPR 491

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +   SC++   G+   L E+   + +I  +  V +
Sbjct: 492 NEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSV 526



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 226/484 (46%), Gaps = 20/484 (4%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           D+F ++SL+      +  + +H   +  G     +L++  +   +  G+I  A   F + 
Sbjct: 56  DSF-YASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEF 114

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGE 196
              D   + A++  Y  N  +  + E++  MR  G+  + F+   VL A     D     
Sbjct: 115 CYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSC 174

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
            IHG  +K GF S V   + N ++ LY +CG    A  +FD +    +VSW+  I+    
Sbjct: 175 IIHGQIIKYGFGSDV--FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQ 232

Query: 257 ---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               VEA  +F  +R N  + +   ++++L +      L  G+ I  F  K+G  +  ++
Sbjct: 233 NGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPAL 292

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
             +L + Y KCG V  A+S FD +   + + WN+MI+GY++NG   +A+++F +M+  ++
Sbjct: 293 LISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNI 352

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+  T+ S + A +   SL+ A  +  ++ KS +  D  + + LI  Y KC ++  ++R
Sbjct: 353 KPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARR 412

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V      K+ V  +A+           EA+ LY  +  +    N  TF  +L AC     
Sbjct: 413 VFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGL 472

Query: 494 LEQG-KAIHCLALKARYDQDIFVE----SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGW 547
           +++G +  HC+      D +I       S V+D+  + G + +A     KI     ++ W
Sbjct: 473 VKEGWELFHCMK-----DFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVW 527

Query: 548 NAMM 551
            A++
Sbjct: 528 GALL 531



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 132/276 (47%), Gaps = 14/276 (5%)

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           + NS   +   Q+H+ ++ SG   +  +++ L+        +  ++++  E    +    
Sbjct: 63  IDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMW 122

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           NA+       + + + +E+YR +  +    +G TF  VLKAC  + D      IH   +K
Sbjct: 123 NAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIK 182

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             +  D+FV++ ++ +Y KCG I  AK  F  +   ++  W +++ GYAQ+G   E   +
Sbjct: 183 YGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRM 242

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL---EHYACIVD 623
           F++M   GVKPD I  +++L +      + + R+       +HG + ++   +  A ++ 
Sbjct: 243 FSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRS-------IHGFVIKMGLEDEPALLIS 295

Query: 624 LL---GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           L     + GL+  AK   DQM    +  +W +++S 
Sbjct: 296 LTAFYAKCGLVTVAKSFFDQMKT-TNVIMWNAMISG 330


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 225/757 (29%), Positives = 381/757 (50%), Gaps = 46/757 (6%)

Query: 36  RFLFDTQNR-DIITYNALISGLARFCQSGP--ALKLFDRLRYQG--LRPDAFTFSSLVKA 90
           R LFD   R   + +N +I GL   C + P  AL  +  ++     ++ D++T+SS++KA
Sbjct: 48  RQLFDALPRPSTVLWNTIIIGLV--CNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKA 105

Query: 91  CG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYA------KSGEIVSA-------EM 134
           C    +L   + VH   L+   +    + +  +  Y+        G++VS          
Sbjct: 106 CADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRK 165

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---D 191
            F        VA+  ++  YV    + ++ + F  M  +G++ +  S   V  A     D
Sbjct: 166 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGD 225

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHL---NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
            K    +HG  VK+G  S   N L   ++AI  +Y   G    A K+FD   E +   W+
Sbjct: 226 FKNANVVHGMLVKLG--SEYVNDLYVVSSAIF-MYAELGCLEFAKKVFDNCLERNTEVWN 282

Query: 249 ERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
             I+A      + +G++ F  F+ +   D  I+E T+++ +S+    +     +Q+ AF 
Sbjct: 283 TMISAFVQNNFSLEGIQLF--FQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 340

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K   +  V + NALI+MY +C  ++ +  IFD +  KD VSWN+MI+ + +NG  ++AL
Sbjct: 341 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 400

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  M +  L+ +  T+ ++L A S+ ++     Q H +++++G   +  M S LI  Y
Sbjct: 401 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMY 459

Query: 423 GKCNALNESKRVLSEI--DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            K   +  ++ V  +    +++    N++ S         +A  + R +       N  T
Sbjct: 460 AKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVT 519

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
            + +L AC     ++ GK +H  +++   DQ++FV +A+IDMY K G+I  A+  F K  
Sbjct: 520 LASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKAN 579

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             S+  ++ M++GY QHG       +F++M K G++PD +T +AVL++C +AGLV E   
Sbjct: 580 EKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQ 639

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA-KMTIDQMPIPPDAHIWQSLLSACTI 659
               M  ++ + P  EH+ C+ D+LGR G ++ A +  I          IW SLL+AC I
Sbjct: 640 IFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRI 699

Query: 660 YGNIDLGLLAGSKLLELQPDNEST--YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
           +   +LG L   KLLE++  N  T  +VLLSN+YA    W +V  +RK+M+E+ L KE G
Sbjct: 700 HKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETG 759

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SWI + GY +HF + D  H QS +IY  L +L   M
Sbjct: 760 SSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEM 796



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 183/401 (45%), Gaps = 30/401 (7%)

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS--LIPNGYTMAS 382
           GQ++ AR +FD L    +V WN++I G   N F ++AL  + +M   S  +  + YT +S
Sbjct: 42  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNES--------- 431
           +L+A +++++L     VH+H ++   L++ S I  + L+  Y  C++             
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRC--LMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 159

Query: 432 ----KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
               ++V   + K+  V  N L +  V    +AEA++ +  +     + +  +F  V  A
Sbjct: 160 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 219

Query: 488 CAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +++ D +    +H + +K  + Y  D++V S+ I MY + G +E AK+ F      +  
Sbjct: 220 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 279

Query: 546 GWNAMMMGYAQHGCYHE-VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
            WN M+  + Q+    E +   F  +       DE+T L+ +++  H      A   L  
Sbjct: 280 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQ-LHA 338

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
               +  + Q+     ++ +  R   ++ +    D MP   D   W +++SA    G  D
Sbjct: 339 FVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISAFVQNGLND 397

Query: 665 --LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN-DVGK 702
             L L    K  +L  D+ +   LLS   A++ + N D+GK
Sbjct: 398 EALMLFYEMKKQDLMVDSVTVTALLS---AASDLRNPDIGK 435



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 147/309 (47%), Gaps = 14/309 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IKN       +   LI+ +++      +F+   +   +D++++N +IS   +  
Sbjct: 335 QLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNG 394

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  AL LF  ++ Q L  D+ T ++L+ A   L+  +I    HG  L+ G      + S
Sbjct: 395 LNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDS 453

Query: 118 GFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
             I+ YAKSG I +A+  F      + D   + +M+ GY  NG  D++  +  +M    +
Sbjct: 454 YLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKV 513

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  +L ++L A   S  +  G+Q+HGF ++      V   +  A++++Y + G    A
Sbjct: 514 MPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNV--FVATALIDMYSKSGSIAHA 571

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F +  E  +V++S  I        G  A  +F  ++ +  Q +  T++ +LS+    
Sbjct: 572 ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYA 631

Query: 290 RILRAGKQI 298
            ++  G QI
Sbjct: 632 GLVDEGLQI 640


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 225/757 (29%), Positives = 364/757 (48%), Gaps = 132/757 (17%)

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV-WNG---EFDKSK-------EVFVEMRS 172
           A +  ++S+ + F D      V Y  +   Y+ WN    EF  S        EVF E+  
Sbjct: 67  AAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 126

Query: 173 LGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  +    +  L       D+  G +IHG  +K GF   V  +L  A+MN Y RC   
Sbjct: 127 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV--YLRCALMNFYGRCWGL 184

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD------GVEAFGLFKDLRFNDFQINEYTMINLL 283
             A ++F E+  P+ + W+E I           GVE   LF+ ++F+  +    T++ +L
Sbjct: 185 EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVE---LFRKMQFSFLKAETATIVRVL 241

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            + G    L A KQI  + ++ G    VS+ N LISMY K G++  AR +FD +  +++ 
Sbjct: 242 QACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTS 301

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFS------------------------------- 372
           SWNSMI+ Y+  GF N A  +F + LE S                               
Sbjct: 302 SWNSMISSYAALGFLNDAWSLF-YELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQR 360

Query: 373 -----LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF---------LLD------- 411
                  PN  +M S+L+A+S    L    + H +++++GF         L+D       
Sbjct: 361 MQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 420

Query: 412 --------DSM-------ISCLITTYGKCNALNESKRVLSEIDKK----NAVHINALASV 452
                   D+M        + L++ Y       ++ R+L++++K+    + V  N + S 
Sbjct: 421 LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 480

Query: 453 LVYASCHAEALE-LYRT---------------IWGSCRE-------------------VN 477
                C  EAL  L++T               I GS +                     N
Sbjct: 481 YAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPN 540

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            ++ + +L+ACA+++ L++GK IHCL+++  + +D+FV +A+IDMY K  ++++A + FR
Sbjct: 541 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 600

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +I   +LA WN M+MG+A  G   E  ++FN+M K GV PD IT+ A+L++C ++GL+ E
Sbjct: 601 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 660

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y   M   + ++P+LEHY C+VDLLGR G L+ A   I  MP+ PDA IW +LL +C
Sbjct: 661 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 720

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+ N+     A   L +L+P+N + Y+L+ NLY+    W D+  LR+ M    +     
Sbjct: 721 RIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQV 780

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +SWI +    H F + +  H  + +IY EL +L   M
Sbjct: 781 WSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEM 817



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/488 (22%), Positives = 197/488 (40%), Gaps = 102/488 (20%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  + + G   D  L   LIS ++K      A R     +NR+  ++N++IS  A   
Sbjct: 255 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 314

Query: 61  QSGPALKLF-----------------------------------DRLRYQGLRPDAFTFS 85
               A  LF                                    R++ +G +P++ + +
Sbjct: 315 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 374

Query: 86  SLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           S+++A    G L   +  HG  L+ GF   VY+ +  I+ Y K+  + SA+  F +  + 
Sbjct: 375 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR 434

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFG 202
           +  A+ ++V GY + G F+ +  +  +M   G++ +  +                     
Sbjct: 435 NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN------------------- 475

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE----PDVVSWSERIAA---AC 255
              G +SG            Y   G   +A+ +  +       P+VVSW+  I+    A 
Sbjct: 476 ---GMISG------------YAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAG 520

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +  ++   F  ++      N  ++  LL +     +L+ GK+I     + GF+E V +  
Sbjct: 521 NNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVAT 580

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI MY K   + +A  +F  +  K   SWN MI G++  G   +A+ +F  M +  + P
Sbjct: 581 ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGP 640

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS------------CLITTYG 423
           +  T  ++L A  NS            +I  G+   DSMI+            C++   G
Sbjct: 641 DAITFTALLSACKNSG-----------LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 689

Query: 424 KCNALNES 431
           +   L+E+
Sbjct: 690 RAGYLDEA 697


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 201/675 (29%), Positives = 338/675 (50%), Gaps = 19/675 (2%)

Query: 80  DAFTFSSLVKACGSLQENE-----IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           D+  + ++++ C  +Q+N+      +H   LK G    ++  +  +  Y K+G    A  
Sbjct: 48  DSHAYGAMLRRC--IQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            F +  + +NV++  +  GY           ++  +   G ELN    T+ L     + +
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQDPIG----LYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 195 GE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
            E    +H   VK+G+ S     +  A++N Y  CG    A  +F+ I   D+V W+  +
Sbjct: 162 AEICPWLHSPIVKLGYDSNA--FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +   +     ++  L   +R   F  N YT    L +  G       K +     K  ++
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               +G  L+ +Y + G ++DA  +F+ +   D V W+ MIA + +NGF N+A+D+F  M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            E  ++PN +T++SIL   +  K      Q+H  ++K GF LD  + + LI  Y KC  +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           + + ++ +E+  KN V  N +           +A  ++R    +   V   TFS  L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A++  ++ G  +H LA+K    + + V +++IDMY KCG I+ A+  F ++    +A WN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           A++ GY+ HG   +   + + M     KP+ +T+L VL+ C +AGL+ + +     M   
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           HG+ P LEHY C+V LLGR G L+ A   I+ +P  P   IW+++LSA     N +    
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           +  ++L++ P +E+TYVL+SN+YA A  W +V  +RK MKE  + KEPG SWI   G  H
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699

Query: 729 HFYAGDSSHSQSKEI 743
           +F  G S H   K I
Sbjct: 700 YFSVGLSDHPDMKLI 714



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 224/455 (49%), Gaps = 12/455 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++S ++K G+  +  +   LI+ ++       A         +DI+ +  ++S       
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
              +LKL   +R  G  P+ +TF + +KA    G+    + VHG  LK  +     +  G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y + G++  A   F +    D V ++ M+  +  NG  +++ ++F+ MR   +  N
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347

Query: 179 EFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+L+++L      K    GEQ+HG  VKVGF   +  +++NA++++Y +C +   AVK+
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI--YVSNALIDVYAKCEKMDTAVKL 405

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E++  + VSW+  I       +G +AF +F++   N   + E T  + L +      +
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G Q+     K    + V++ N+LI MY KCG +  A+S+F+ +   D  SWN++I+GY
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLD 411
           S +G   QAL +   M +    PNG T   +L   SN+  + Q  +    +I+  G    
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
               +C++   G+   L+++ +++  I  + +V I
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 182/366 (49%), Gaps = 23/366 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K  + LDP +   L+  +T+  D   AF+   +    D++ ++ +I   ARFCQ
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI---ARFCQ 325

Query: 62  SG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
           +G    A+ LF R+R   + P+ FT SS++  C   +     E +HG+ +K+GF   +Y+
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ YAK  ++ +A   F +    + V++  ++ GY   GE  K+  +F E     +
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV 445

Query: 176 ELNEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            + E + ++ LG     AS D+  G Q+HG  +K      V   ++N+++++Y +CG   
Sbjct: 446 SVTEVTFSSALGACASLASMDL--GVQVHGLAIKTNNAKKVA--VSNSLIDMYAKCGDIK 501

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A  +F+E+   DV SW+  I+       G +A  +   ++  D + N  T + +LS   
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561

Query: 288 GERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-W 345
              ++  G++  ++     G    +     ++ + G+ GQ++ A  + + + ++ SV  W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621

Query: 346 NSMIAG 351
            +M++ 
Sbjct: 622 RAMLSA 627



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 8/261 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L++K G  LD  +S  LI  + K      A +   +  +++ +++N +I G     
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           + G A  +F       +     TFSS + AC SL   ++   VHG+ +K   + +V + +
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G+I  A+  F +   +D  ++ A++ GY  +G   ++  +   M+    + 
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL    +   + +G++     ++   +     H    ++ L  R GQ   A+K
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY-TCMVRLLGRSGQLDKAMK 607

Query: 235 MFDEIT-EPDVVSWSERIAAA 254
           + + I  EP V+ W   ++A+
Sbjct: 608 LIEGIPYEPSVMIWRAMLSAS 628


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 230/743 (30%), Positives = 365/743 (49%), Gaps = 95/743 (12%)

Query: 89  KACGSLQENEIVHGVCLKLGFSSRVYL-VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           + C +L + +++H   +  G     Y  V+  I  Y  S  I +A       L L+    
Sbjct: 32  QQCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNA------ILLLEKNVT 85

Query: 148 TAMVCGYVWN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---G 195
            +    Y WN            + +  +F  M++L    + ++   V  A  ++     G
Sbjct: 86  PSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELG 145

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP---DVVSWSERIA 252
             IHG  +++GF S V   + NA++++Y +C   + A K+FDE+      D V+W+  ++
Sbjct: 146 ASIHGCVIRLGFESNV--FVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVS 203

Query: 253 AACDGVE---AFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                     A  LF+++        +   ++N+L   G   +   G+Q+  FC + G +
Sbjct: 204 VYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLV 263

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
           E V +GNAL+ MY KCG++ DA  +F+ + FKD V+WN+M+ GYS+NG F  AL +F  M
Sbjct: 264 EDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 323

Query: 369 LE----------FSLI-------------------------PNGYTMASILEAVSNSKSL 393
            E           S+I                         PN  T+ S+L A ++  +L
Sbjct: 324 REEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGAL 383

Query: 394 KQAMQVHSHIIKSGFLL---------DDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               + H + +K  F+L         D ++I+ LI  Y KC +L  ++ +  EI  K+  
Sbjct: 384 LHGKETHCYSVK--FILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRD 441

Query: 445 HINALASVLVYASCHAEA---LELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQGKA 499
            +     +  YA  H +A   L+L+  ++   +C   N  T S VL ACA +  L+ GK 
Sbjct: 442 VVTWTVMIGGYAQ-HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQ 500

Query: 500 IHCLALK-ARYDQDI-FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           IH   L+ +R D D+ FV + +IDMY K G ++ A+  F  + + +   W +++ GY  H
Sbjct: 501 IHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMH 560

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   +   +F++M K  +  D IT+L VL +C H+G+            D  G+ P +EH
Sbjct: 561 GRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM------------DF-GVDPGVEH 607

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC+VDLLGR G L  A   I+ MPI P   +W +LLSAC I+ N +L   A  KLLEL+
Sbjct: 608 YACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELK 667

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
            DN+ TY LLSN+YA+A  W DV ++   MK   + K PG+SW+        FY GD +H
Sbjct: 668 ADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTH 727

Query: 738 SQSKEIYKELIKLYEHMVATAKL 760
            QS++IY+ L  L + + A   L
Sbjct: 728 LQSQKIYETLADLIKRIKANFSL 750



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 255/555 (45%), Gaps = 81/555 (14%)

Query: 7   IKNGHHLDPILSTT-LISHFTKFADFRRAFRFL---FDTQNRDIITYNALISGLARFCQS 62
           I NGH L+   + T LI  +        A   L       +  +  +N LI     F   
Sbjct: 48  IINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSP 107

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGF 119
             AL+LF R++     PD +TF  + KACG +   E+   +HG  ++LGF S V++ +  
Sbjct: 108 NTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAV 167

Query: 120 IENYAKSGEIVSA-----EMCFRDCLDLDNVAYTAMVCGY----VWNGEFDKSKEVFVEM 170
           I  Y K   +V A     E+C+R     D+V + ++V  Y    V N      +E+ V  
Sbjct: 168 ISMYGKCKAVVHARKVFDELCYRGI--CDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGY 225

Query: 171 RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
             L   +   ++  V G       G Q+HGF V+ G +  V   + NA++++Y +CG+  
Sbjct: 226 GILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDV--FVGNALVDMYAKCGKME 283

Query: 231 DAVKMF-----------------------------------DEITEPDVVSWSERIAAAC 255
           DA K+F                                   +E  E DVV+WS  I+   
Sbjct: 284 DANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYA 343

Query: 256 D---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM---- 308
               G EA  +F+ +     + N  T+++LLS+      L  GK+    CY V F+    
Sbjct: 344 QRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETH--CYSVKFILKGE 401

Query: 309 -----EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIAGYSENGFFNQA 361
                + +++ NALI MY KC  +  AR++FD +  KD   V+W  MI GY+++G  N A
Sbjct: 402 HNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHA 461

Query: 362 LDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SC 417
           L +F  M +    ++PN +T++ +L A +   +LK   Q+H+++++   +  D +   +C
Sbjct: 462 LQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANC 521

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE-- 475
           LI  Y K   ++ ++ V   + K+NAV   +  S+L     H  + + +R      +E  
Sbjct: 522 LIDMYSKSGDVDTAQVVFDSMSKRNAV---SWTSLLTGYGMHGRSEDAFRVFDEMRKEAL 578

Query: 476 -VNGSTFSIVLKACA 489
            ++G TF +VL AC+
Sbjct: 579 VLDGITFLVVLYACS 593



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/412 (20%), Positives = 176/412 (42%), Gaps = 78/412 (18%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++   +++G   D  +   L+  + K      A +     + +D++T+NA+++G ++  
Sbjct: 252 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 311

Query: 61  QSGPALKLFDRLRYQGL-----------------------------------RPDAFTFS 85
           +   AL LF ++R + +                                   RP+  T  
Sbjct: 312 RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLM 371

Query: 86  SLVKACGSLQENEIVHGV---CLKLGF---------SSRVYLVSGFIENYAKSGEIVSAE 133
           SL+ AC S+    ++HG    C  + F         +  + +++  I+ YAK   +  A 
Sbjct: 372 SLLSACASV--GALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVAR 429

Query: 134 MCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG--LELNEFSLTAVLGAS 189
             F +    D D V +T M+ GY  +G+ + + ++F EM  +   +  N+F+++ VL A 
Sbjct: 430 AMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMAC 489

Query: 190 FD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                +K G+QIH + ++   +      + N ++++Y + G    A  +FD +++ + VS
Sbjct: 490 ARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVS 549

Query: 247 WSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLL---SSVGGERILRAGKQIQA 300
           W+  +          +AF +F ++R     ++  T + +L   S  G +  +  G +  A
Sbjct: 550 WTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVEHYA 609

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMIAG 351
                           ++ + G+ G++ +A R I D  I    V W ++++ 
Sbjct: 610 ---------------CMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSA 646


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/574 (32%), Positives = 308/574 (53%), Gaps = 8/574 (1%)

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           G + D++ G  +H   V  G  +     L N ++ +Y  C     AV++FD +  P++VS
Sbjct: 28  GRAGDLRLGRCLHARLVLSG-AAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVS 86

Query: 247 WSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  ++         +A   F  +        ++ + +   +        AG Q+     
Sbjct: 87  WTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGV 146

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           ++GF   + + + L  MY K G + +A  +FD +  KD+V+W +MI GY++NG    A+ 
Sbjct: 147 RLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVI 206

Query: 364 MFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            F  M    L+  + + + S+L A    K    A  +HS ++KSGF  + ++ + L   Y
Sbjct: 207 AFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMY 266

Query: 423 GKCNALNESKRVLSEIDKK--NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            K   ++ + RV+ +ID+   N V   +L    +   C  +AL ++  +     E N  T
Sbjct: 267 AKAADMDNAARVV-KIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFT 325

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           FS ++K CA    LEQG  +H   +K     D FV S ++DMY KCG I  + + F++I 
Sbjct: 326 FSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIE 385

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             +   WNA +   AQHG   E    F++M+  G++P+ IT++++LT+C HAGLV E   
Sbjct: 386 YHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLK 445

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           Y   M D HG+ P+ EHY+CI+D+ GR G L+ A+  I +MP+ P+A+ W SLL AC + 
Sbjct: 446 YFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMR 505

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           GN +LG +A   +++L+PDN   +V LS +YAS G W DV  +RK M++  + K PG+SW
Sbjct: 506 GNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSW 565

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +     TH F + D SH Q ++IY++L +LYE +
Sbjct: 566 VDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERI 599



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 216/441 (48%), Gaps = 17/441 (3%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           L+  LI+ ++  AD   A R LFD   R +++++  L+SGL +      AL  F  +   
Sbjct: 55  LANHLITMYSHCADVPSAVR-LFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRA 113

Query: 76  GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           GL P  F  SS  +A  +L        +H V ++LGF + +++ S   + Y+KSG +V A
Sbjct: 114 GLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEA 173

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVLGASFD 191
              F      D VA+TAM+ GY  NG  + +   F +MR  GL   ++  L +VL AS  
Sbjct: 174 CRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGG 233

Query: 192 VKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-EITEPDVVSW 247
           +K+G     IH   +K GF   V   + NA+ ++Y +     +A ++   +    +VVS 
Sbjct: 234 LKDGWLARAIHSCVMKSGFEQEVA--VRNALTDMYAKAADMDNAARVVKIDQGSLNVVSA 291

Query: 248 SERIAA--ACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I      D +E A  +F +LR    + NE+T  +++     + +L  G Q+ A   K
Sbjct: 292 TSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIK 351

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
              +    + + L+ MYGKCG ++ +  +F  + +   ++WN+ I   +++G   +A+  
Sbjct: 352 TSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRA 411

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYG 423
           F  M    + PN  T  S+L A S++  + + ++  +S     G        SC+I  YG
Sbjct: 412 FDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYG 471

Query: 424 KCNALNESKRVLSEID-KKNA 443
           +   L+E+++ + E+  K NA
Sbjct: 472 RAGRLDEAEKFIGEMPVKPNA 492



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IK     D  +S+TL+  + K      + +   + +    I +NA I+ LA+  
Sbjct: 344 QLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHG 403

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLK--LGFSSRVYLV 116
               A++ FDR+   G+RP+  TF SL+ AC    L +  + +   +K   G   +    
Sbjct: 404 HGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHY 463

Query: 117 SGFIENYAKSGEIVSAE 133
           S  I+ Y ++G +  AE
Sbjct: 464 SCIIDMYGRAGRLDEAE 480


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 184/550 (33%), Positives = 296/550 (53%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  R G+QI     K+G+   + +  +LISMY + G++ DAR +FD             
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G   +AL++F  M++ ++ P+ 
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM S++ A + S S++   QVHS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  +E G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +      +++IDMY KCG IE A++ F  I   SL+ WNAM+ G+
Sbjct: 356 RWIHVYINKRLKGVANASSH-RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGF 414

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG  +   ++F++M K  ++PD+IT++ +L++C H+G++   R     M + + + P+
Sbjct: 415 AMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 474

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC +Y N++LG      L+
Sbjct: 475 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLI 534

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P N  +YVLLSN+YA+AG WN+V K+R  + +K + K PG S I +    H F  GD
Sbjct: 535 KIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 595 KFHPRNREIY 604



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 243/545 (44%), Gaps = 84/545 (15%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  ++   ++S    F     A       Q  +++ +N +  G 
Sbjct: 21  IHAQMIKTGLHNTNYALSKLIEFCVLS--PHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       AL L+  +   GL P+ +TF  L+K+C    + +E + +HG  LKLG+   +
Sbjct: 79  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           Y+ +  I  Y ++G +  A   F      D V+YTA++ GY                   
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G   ++ E+F EM    +  +E ++ +V+ A   S  ++ G Q+H
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF S +   + NA+++LY++CG+   A  +F+ ++  DV+SW+  I        
Sbjct: 259 SWIDDHGFGSNL--KIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 316

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K   G     S  
Sbjct: 317 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 376

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A+ +FD ++ +   SWN+MI G++ +G  N A D+F  M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 436

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P+  T   +L A S+S  L     +  HI +S                     + E  ++
Sbjct: 437 PDDITFVGLLSACSHSGML----DLGRHIFRS---------------------MKEDYKI 471

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             +++     H   +  +L ++    EA E+  T+     E +G  +  +LKAC    ++
Sbjct: 472 TPKLE-----HYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMYANV 523

Query: 495 EQGKA 499
           E G++
Sbjct: 524 ELGES 528



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 216/457 (47%), Gaps = 44/457 (9%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
           SL+  C +LQ   ++H   +K G  +  Y +S  IE    S     +  A   F    + 
Sbjct: 7   SLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEP 66

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
           + + +  M  G+  + +   +  ++V M SLGL  N ++   +L +   S   +EG+QIH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIH 126

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA--------------------------- 232
           G  +K+G+   +  +++ +++++YV+ G+  DA                           
Sbjct: 127 GHVLKLGYDLDL--YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184

Query: 233 ----VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
                KMFDEI   DVVSW+  I   A   +  EA  LFK++   + + +E TM++++S+
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 +  G+Q+ ++    GF   + I NALI +Y KCG+V  A  +F+ L +KD +SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N++I GY+    + +AL +F  ML     PN  TM SIL A ++  +++    +H +I K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364

Query: 406 --SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
              G     S  + LI  Y KC  +  +++V   I  ++    NA+            A 
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +++  +  +  E +  TF  +L AC+    L+ G+ I
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 46/393 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  ++K G+ LD  + T+LIS + +      A +    + +RD+++Y ALI+G A   
Sbjct: 124 QIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKG 183

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF  +    +RPD  T  S+V 
Sbjct: 184 YIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVS 243

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC    S++    VH      GF S + +V+  I+ Y K GE+ +A   F      D ++
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 303

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +  ++ GY     + ++  +F EM   G   N+ ++ ++L A      ++ G  IH +  
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN 363

Query: 204 KVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGV 258
           K   L GV N  ++  +++++Y +CG    A ++FD I    + SW+  I   A      
Sbjct: 364 KR--LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRAN 421

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGNAL 317
            AF +F  +R N+ + ++ T + LLS+     +L  G+ I ++          +     +
Sbjct: 422 AAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCM 481

Query: 318 ISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
           I + G  G   +A  + + + +  D V W S++
Sbjct: 482 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 514



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 35/285 (12%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI---TTYGKCNALNESKRVLSEIDK 440
           L  + N K+L+    +H+ +IK+G    +  +S LI         + L  +  V   I +
Sbjct: 6   LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
            N +  N +      +S    AL LY  +       N  TF  +LK+CA      +G+ I
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK---------------------- 538
           H   LK  YD D++V +++I MY + G +EDA++ F +                      
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185

Query: 539 ---------ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                    I    +  WNAM+ GYA+ G   E   LF +M K  V+PDE T ++V+++C
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
             +  +   R   S + D HG    L+    ++DL  + G +E A
Sbjct: 246 AQSASIELGRQVHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETA 289


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 211/661 (31%), Positives = 335/661 (50%), Gaps = 20/661 (3%)

Query: 78  RPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG---EIVSAEM 134
           RP      + + AC S      +HG  ++   +S  ++    I   A      ++  A  
Sbjct: 14  RPIRHHLLAYLDACASRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARK 73

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV-- 192
            F      +   +  M+ GY        +  VF EMR  G+  + +++ AV+ AS     
Sbjct: 74  VFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAG 133

Query: 193 ----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
                 G+ IH    ++GF S V   + + ++N Y       +A K+F+E+ E DVVSW+
Sbjct: 134 LKWRSNGDAIHALVRRIGFTSDV--FVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWT 191

Query: 249 ERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I+A        +   +  +++      N+ T+I+LLS+ G  + +  G+ +     K 
Sbjct: 192 SMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF 251

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G    V I NALISMY KCG ++DA   F  +  + + SWN++I G+ +N    +AL +F
Sbjct: 252 GIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             ML   + P+G T+ S+L A +    L++ M VHS+I  +G   D+ + + LI  Y KC
Sbjct: 312 EEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKC 371

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV- 484
             +  ++RV   + KK+ V    +    V       A  L+  +     EV     ++V 
Sbjct: 372 GDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEM--KIAEVVAHEMALVS 429

Query: 485 -LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            L AC+ +  L++G+ IH    +    +D+ +ESA++DMY KCG I+ A   FRK+    
Sbjct: 430 LLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQ 489

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREARTYL 602
              WNAM+ G A +G   E   LF++M +    KPD IT  AVL +C H G+V E   Y 
Sbjct: 490 TLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF 549

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             MS L G++P  EHY CIVDLLGR G+L+ A   I +MPI P+  IW SLL+AC ++  
Sbjct: 550 YLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHR 608

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           +DLG + G  ++ + P++   +VL+SNL+A    W+DV  +R  M  + + K PG+S + 
Sbjct: 609 MDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQ 668

Query: 723 V 723
           V
Sbjct: 669 V 669



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 228/442 (51%), Gaps = 16/442 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L+ + G   D  + + L++++  F     A +   +   RD++++ ++IS  A+   
Sbjct: 143 IHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGH 202

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
               LK+   ++ +G+ P+  T  SL+ ACG  Q   E   V+    K G  + V + + 
Sbjct: 203 WDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNA 262

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y K G +  A   F+        ++  ++ G+V N E  ++  +F EM   G+  +
Sbjct: 263 LISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPD 322

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVC--NHLNNAIMNLYVRCGQKLDAV 233
             +L +VL A     ++++G  +H + +K    +G+C  N L N+++N+Y +CG    A 
Sbjct: 323 GITLVSVLSACAQLGELRKGMHVHSY-IKD---NGICCDNILTNSLINMYAKCGDMAAAE 378

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F  +T+ DVVSW+  +     G +   AF LF++++  +   +E  +++LLS+     
Sbjct: 379 RVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLG 438

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G++I ++  ++   + + + +AL+ MY KCG ++ A  IF  +  K ++SWN+MI 
Sbjct: 439 ALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIG 498

Query: 351 GYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           G + NG+  +A+++F  MLE     P+G T+ ++L A ++   + + ++    +   G +
Sbjct: 499 GLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVV 558

Query: 410 LDDSMISCLITTYGKCNALNES 431
            D     C++   G+   L+E+
Sbjct: 559 PDTEHYGCIVDLLGRAGMLDEA 580


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 196/623 (31%), Positives = 317/623 (50%), Gaps = 15/623 (2%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT---AVLGASFDVKEGEQIHGF 201
           V++ +++ GY   G + +   +F E R   L L++F+ +   +V G + D++ G  IH  
Sbjct: 7   VSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHAL 66

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
            + V  L G    L N+++++Y +CG+   A  +F+   E D VSW+  IA         
Sbjct: 67  -ITVSGLGGPV-LLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSND 124

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGE--RILRAGKQIQAFCYKVGFMEVVSIGNA 316
           E   L   +  +   +N Y + + L + G      +  GK +     K+G    V +G A
Sbjct: 125 EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTA 184

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE-----NGFFNQALDMFCHMLEF 371
           L+  Y K G + DA  IF  +   + V +N+MIAG+ +     + F N+A+ +F  M   
Sbjct: 185 LLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSR 244

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + P+ +T +SIL+A S  ++ +   Q+H+ I K     D+ + + L+  Y    ++ + 
Sbjct: 245 GMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDG 304

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +      K + V   +L    V        L L+  +  S R+ +  T SI+L ACA +
Sbjct: 305 LKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANL 364

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             ++ G+ IH  A+K        ++++ I MY KCG I+ A   F++     +  W+ M+
Sbjct: 365 AAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMI 424

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
              AQHGC  E  +LF  M   G+ P+ IT+L VL +C H GLV E   Y   M   HG+
Sbjct: 425 SSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGI 484

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P ++H ACIVDLLGR G L  A+  I       D  +W+SLLSAC ++   D G     
Sbjct: 485 TPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAE 544

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           +++EL+P+  ++YVLL N+Y  AG+     ++R  MK++ + KEPG SWI VG   H F 
Sbjct: 545 RVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFV 604

Query: 732 AGDSSHSQSKEIYKELIKLYEHM 754
           AGD SH  S+ IY +L ++ E +
Sbjct: 605 AGDRSHPNSQVIYVQLEEMLEEI 627



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 241/507 (47%), Gaps = 19/507 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIV 100
           R+++++N+LISG  +       + LF   R   LR D FTFS+ +  CG    L+   ++
Sbjct: 4   RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLI 63

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           H +    G    V L +  I+ Y K G I  A + F    +LD+V++ +++ GYV  G  
Sbjct: 64  HALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSN 123

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHL 215
           D+   + V+M   GL LN ++L + L A     S  ++ G+ +HG  VK+G    V   +
Sbjct: 124 DEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV--V 181

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD--------GVEAFGLFKDL 267
             A+++ Y + G   DA K+F  + +P+VV ++  IA              EA  LF ++
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 241

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           +    + +E+T  ++L +         GKQI A  +K        IGNAL+ +Y   G +
Sbjct: 242 QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSI 301

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            D    F      D VSW S+I G+ +NG F   L +F  +L     P+ +T++ +L A 
Sbjct: 302 EDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSAC 361

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           +N  ++K   Q+H++ IK+G      + +  I  Y KC  ++ +     E    + V  +
Sbjct: 362 ANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWS 421

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALK 506
            + S      C  EA++L+  + GS    N  TF  VL AC+    +E+G +    +   
Sbjct: 422 VMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKD 481

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAK 533
                ++   + ++D+  + G + +A+
Sbjct: 482 HGITPNVKHSACIVDLLGRAGRLAEAE 508



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 18/361 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ----- 61
           +K G  LD ++ T L+  + K  D   A +      + +++ YNA+I+G  +        
Sbjct: 171 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 230

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
           +  A+ LF  ++ +G++P  FTFSS++KAC +++  E    +H    K    S  ++ + 
Sbjct: 231 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 290

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +E Y+ SG I     CF     LD V++T+++ G+V NG+F+    +F E+   G + +
Sbjct: 291 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 350

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+++ +L A  +   VK GEQIH + +K G   G    + N+ + +Y +CG    A   
Sbjct: 351 EFTISIMLSACANLAAVKSGEQIHAYAIKTGI--GNFTIIQNSQICMYAKCGDIDSANMT 408

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E   PD+VSWS  I++        EA  LF+ ++ +    N  T + +L +     ++
Sbjct: 409 FKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLV 468

Query: 293 RAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIA 350
             G +  +      G    V     ++ + G+ G++ +A S I D     D V W S+++
Sbjct: 469 EEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLS 528

Query: 351 G 351
            
Sbjct: 529 A 529



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 23/364 (6%)

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           ++ VSWNS+I+GY++ GF+++ +++F       L  + +T ++ L     +  L+    +
Sbjct: 4   RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLI 63

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H+ I  SG      + + LI  Y KC  ++ ++ V    D+ ++V  N+L +  V    +
Sbjct: 64  HALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSN 123

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAA--MTDLEQGKAIHCLALKARYDQDIFVES 517
            E L L   +      +N       LKAC +   + +E GK +H  A+K   D D+ V +
Sbjct: 124 DEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGT 183

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY-----HEVSNLFNKMSK 572
           A++D Y K G +EDA + F+ +   ++  +NAM+ G+ Q         +E   LF +M  
Sbjct: 184 ALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 243

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLG 626
            G+KP E T+ ++L +C       EA     C   +H  I +    +       +V+L  
Sbjct: 244 RGMKPSEFTFSSILKACS----TIEA---FECGKQIHAQIFKYNLQSDEFIGNALVELYS 296

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL--ELQPDNESTY 684
             G +E         P   D   W SL+      G  + GL    +LL    +PD  +  
Sbjct: 297 LSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355

Query: 685 VLLS 688
           ++LS
Sbjct: 356 IMLS 359



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K     D  +   L+  ++         +    T   D++++ +LI G  +  
Sbjct: 271 QIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNG 330

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
           Q    L LF  L + G +PD FT S ++ AC +L   +  E +H   +K G  +   + +
Sbjct: 331 QFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN 390

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAK G+I SA M F++  + D V+++ M+     +G   ++ ++F  M+  G+  
Sbjct: 391 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 450

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  +   VL A      V+EG +      K   ++    H +  I++L  R G+  +A  
Sbjct: 451 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKH-SACIVDLLGRAGRLAEAES 509

Query: 235 -MFDEITEPDVVSWSERIAA 253
            + D   E D V W   ++A
Sbjct: 510 FIMDSGFEGDPVMWRSLLSA 529



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 11/213 (5%)

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + K+N V  N+L S       + E + L++    S   ++  TFS  L  C    DL  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + IH L   +     + + +++IDMYCKCG I+ A+  F          WN+++ GY + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   E+  L  KM + G+  +     + L +C          + + C   LHG   +L  
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACG-----SNFSSSIECGKMLHGCAVKLGL 175

Query: 618 Y------ACIVDLLGRVGLLEGAKMTIDQMPIP 644
                    ++D   ++G LE A      MP P
Sbjct: 176 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP 208


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 225/757 (29%), Positives = 381/757 (50%), Gaps = 46/757 (6%)

Query: 36  RFLFDTQNR-DIITYNALISGLARFCQSGP--ALKLFDRLRYQG--LRPDAFTFSSLVKA 90
           R LFD   R   + +N +I GL   C + P  AL  +  ++     ++ D++T+SS++KA
Sbjct: 24  RQLFDALPRPSTVLWNTIIIGLV--CNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKA 81

Query: 91  CG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYA------KSGEIVSA-------EM 134
           C    +L   + VH   L+   +    + +  +  Y+        G++VS          
Sbjct: 82  CADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRK 141

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---D 191
            F        VA+  ++  YV    + ++ + F  M  +G++ +  S   V  A     D
Sbjct: 142 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGD 201

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHL---NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
            K    +HG  VK+G  S   N L   ++AI  +Y   G    A K+FD   E +   W+
Sbjct: 202 FKNANVVHGMLVKLG--SEYVNDLYVVSSAIF-MYAELGCLEFAKKVFDNCLERNTEVWN 258

Query: 249 ERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
             I+A      + +G++ F  F+ +   D  I+E T+++ +S+    +     +Q+ AF 
Sbjct: 259 TMISAFVQNNFSLEGIQLF--FQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 316

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K   +  V + NALI+MY +C  ++ +  IFD +  KD VSWN+MI+ + +NG  ++AL
Sbjct: 317 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 376

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  M +  L+ +  T+ ++L A S+ ++     Q H +++++G   +  M S LI  Y
Sbjct: 377 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMY 435

Query: 423 GKCNALNESKRVLSEI--DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            K   +  ++ V  +    +++    N++ S         +A  + R +       N  T
Sbjct: 436 AKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVT 495

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
            + +L AC     ++ GK +H  +++   DQ++FV +A+IDMY K G+I  A+  F K  
Sbjct: 496 LASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKAN 555

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             S+  ++ M++GY QHG       +F++M K G++PD +T +AVL++C +AGLV E   
Sbjct: 556 EKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQ 615

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA-KMTIDQMPIPPDAHIWQSLLSACTI 659
               M  ++ + P  EH+ C+ D+LGR G ++ A +  I          IW SLL+AC I
Sbjct: 616 IFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRI 675

Query: 660 YGNIDLGLLAGSKLLELQPDNEST--YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
           +   +LG L   KLLE++  N  T  +VLLSN+YA    W +V  +RK+M+E+ L KE G
Sbjct: 676 HKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETG 735

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            SWI + GY +HF + D  H QS +IY  L +L   M
Sbjct: 736 SSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEM 772



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 183/401 (45%), Gaps = 30/401 (7%)

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS--LIPNGYTMAS 382
           GQ++ AR +FD L    +V WN++I G   N F ++AL  + +M   S  +  + YT +S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNES--------- 431
           +L+A +++++L     VH+H ++   L++ S I  + L+  Y  C++             
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRC--LMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 135

Query: 432 ----KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
               ++V   + K+  V  N L +  V    +AEA++ +  +     + +  +F  V  A
Sbjct: 136 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 195

Query: 488 CAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            +++ D +    +H + +K  + Y  D++V S+ I MY + G +E AK+ F      +  
Sbjct: 196 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 255

Query: 546 GWNAMMMGYAQHGCYHE-VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
            WN M+  + Q+    E +   F  +       DE+T L+ +++  H      A   L  
Sbjct: 256 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQ-LHA 314

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
               +  + Q+     ++ +  R   ++ +    D MP   D   W +++SA    G  D
Sbjct: 315 FVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISAFVQNGLND 373

Query: 665 --LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN-DVGK 702
             L L    K  +L  D+ +   LLS   A++ + N D+GK
Sbjct: 374 EALMLFYEMKKQDLMVDSVTVTALLS---AASDLRNPDIGK 411



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 147/309 (47%), Gaps = 14/309 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IKN       +   LI+ +++      +F+   +   +D++++N +IS   +  
Sbjct: 311 QLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNG 370

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  AL LF  ++ Q L  D+ T ++L+ A   L+  +I    HG  L+ G      + S
Sbjct: 371 LNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDS 429

Query: 118 GFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
             I+ YAKSG I +A+  F      + D   + +M+ GY  NG  D++  +  +M    +
Sbjct: 430 YLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKV 489

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  +L ++L A   S  +  G+Q+HGF ++      V   +  A++++Y + G    A
Sbjct: 490 MPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNV--FVATALIDMYSKSGSIAHA 547

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F +  E  +V++S  I        G  A  +F  ++ +  Q +  T++ +LS+    
Sbjct: 548 ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYA 607

Query: 290 RILRAGKQI 298
            ++  G QI
Sbjct: 608 GLVDEGLQI 616


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 182/550 (33%), Positives = 296/550 (53%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +FD I EP ++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 56  AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI--------------- 333
               + G+Q+     K GF   + I  +LISMY + G++ DA+ +               
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175

Query: 334 ----------------FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                           FD +  KD VSWN+ I+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM ++L A + S S++   QVHS I   GF  +  +++ LI  Y KC  L  +  +   
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S  + N  T   +L ACA +  ++ G
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG 355

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +    + +++IDMY KCG IE A++ F  +   SL+ WNAM+ G+
Sbjct: 356 RWIHVYIDKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF 414

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG  +   ++F++M K G++PD+IT++ +L++C H+G++   R     M+  + L+P+
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPK 474

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DL G  GL + A+  I+ M + PD  IW SLL AC ++GN++LG      L+
Sbjct: 475 LEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 534

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P+N  +YVLLSN+YA+A  WN+V K R  + +K + K PG S I +    H F  GD
Sbjct: 535 KIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 595 KFHPRNREIY 604



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 222/486 (45%), Gaps = 52/486 (10%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  +L   ++S    F     A       Q   ++ +N +  G 
Sbjct: 21  IHAQMIKTGLHNTNYALSKLLEXCVLS--PHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       ALKL+  +   GL P+++TF  L+K+C    + +E + +HG  LK GF   +
Sbjct: 79  ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           Y+ +  I  Y ++G +  A+         D V+YTA++ GY                   
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G + ++ E+F +M    +  +E ++  VL A   S  ++ G Q+H
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF  G    + NA+++LY +CG+   A  +F  ++  DV+SW+  I        
Sbjct: 259 SWINDHGF--GXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNL 316

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+D+  +  + N+ TM+++LS+      +  G+ I  +  K   G     S+ 
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A+ +FD ++ +   SWN+MI G++ +G  N A D+F  M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCNALNESKR 433
           P+  T   +L A S+S  L     +   + +   L+       C+I   G      E+++
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496

Query: 434 VLSEID 439
           +++ ++
Sbjct: 497 MINTME 502



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/563 (24%), Positives = 241/563 (42%), Gaps = 87/563 (15%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
           SL+  C +LQ   I+H   +K G  +  Y +S  +E    S     +  A   F    + 
Sbjct: 7   SLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEP 66

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
             + +  M  G+  + +   + +++V M SLGL  N ++   +L +   S   KEG+Q+H
Sbjct: 67  XLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLH 126

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK------------------------- 234
           G  +K GF   +  +++ +++++YV+ G+  DA K                         
Sbjct: 127 GQVLKFGFDLDL--YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184

Query: 235 ------MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSS 285
                 MFDEI   DVVSW+  I+   +     EA  LFK +   + + +E TM+ +LS+
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 +  G+Q+ ++    GF   + I NALI +Y KCG++  A  +F  L  KD +SW
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N++I GY+    + +AL +F  ML     PN  TM SIL A ++  ++     +H +I K
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364

Query: 406 --SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
              G     S+ + LI  Y KC  +  +++V   +  ++    NA+            A 
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           +++  +  +  E +  TF  +L AC+    L+ G+ I                       
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI----------------------- 461

Query: 524 CKCGTIEDAKRAFRKICRD-----SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
                       FR + RD      L  +  M+      G + E   + N M    ++PD
Sbjct: 462 ------------FRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME---MEPD 506

Query: 579 EITYLAVLTSCCHAGLVREARTY 601
            + + ++L +C   G V    +Y
Sbjct: 507 GVIWCSLLKACKMHGNVELGESY 529



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 182/402 (45%), Gaps = 50/402 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           Q++  ++K G  LD  + T+LIS + +      A +    + +RD+++Y ALI+G A   
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF ++    +RPD  T  +++ 
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC   GS++    VH      GF   + +V+  I+ Y+K GE+ +A   F+   + D ++
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
           +  ++ GY     + ++  +F +M   G + N+ ++ ++L A     + D+  G  IH +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDI--GRWIHVY 361

Query: 202 GVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
             K   L GV N   L  +++++Y +CG    A ++FD +    + SW+  I   A    
Sbjct: 362 IDKR--LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGN 315
              AF +F  +R N  + ++ T + LLS+     +L  G+ I ++       M  +    
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYG 479

Query: 316 ALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENG 356
            +I + G  G   +A  + + + +  D V W S++     +G
Sbjct: 480 CMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHG 521


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 215/730 (29%), Positives = 361/730 (49%), Gaps = 20/730 (2%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           +SL+I  G+  +   +T L++ +    K A     FR +    ++DI  +N++I      
Sbjct: 30  HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLI---HSKDIFLWNSIIQSHFSN 86

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLG-FSSRVYL 115
                A   + ++R     P+ FT   +V  C  L        +HG+  KLG F     +
Sbjct: 87  GDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAI 146

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S FI  Y+K G + SA + F +    D V +TA++ GYV N E  +  +   EM  +G 
Sbjct: 147 GSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGG 206

Query: 176 ELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  ++ +   A  D+    EG+ +HG  +K GFL      + + I+++Y RCG   +A
Sbjct: 207 TPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL--CFEVVKSTILSMYSRCGSPEEA 264

Query: 233 VKMFDEITEPDVVSWSERIAAACD-GV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            + F ++ + D++SW+  IA     G+  E   LF +++ ++   +E  +  +L   G  
Sbjct: 265 YRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNS 324

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             +  GK   A   K          NAL+SMY K G +  A  IF +   K S  W++MI
Sbjct: 325 DRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIF-HSFHKSSEDWSTMI 383

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GYS  G   + +     ML     P+  ++ S++ + S   ++     +H + IK+  +
Sbjct: 384 LGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSII 443

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            + S+ + L+  YGK   +  + R+     +++ +  N L S    +   AEA+ L+  +
Sbjct: 444 ENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKM 503

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  N  T  IVL ACA +  L++G+ IH    +  ++ +I + +A+IDMY KCG +
Sbjct: 504 VKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGEL 563

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E +++ F       +  WN M+  Y  HG       +F  M +  +KP+  T+L++L++C
Sbjct: 564 ETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSAC 623

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H G V E R     M   +G+ P L+HYA I+DLLGR G LE A+  +  MPI PD  +
Sbjct: 624 NHTGHVLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTV 682

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W SLLSAC I+   ++G+      +E  P N+  Y++LS+LY+  G W++V K+R  MK+
Sbjct: 683 WGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKK 742

Query: 710 KFLCKEPGYS 719
           + + K  G+S
Sbjct: 743 RGVEKRAGWS 752



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/563 (22%), Positives = 244/563 (43%), Gaps = 54/563 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L +KNG     ++ +T++S +++      A+R       +D+I++ ++I+  ++F  
Sbjct: 232 LHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGL 291

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
               L LF  ++   + PD    S ++   G+   + I  G         +   +SG   
Sbjct: 292 MSECLHLFWEMQASEIIPDEIVISCMLMGFGN--SDRIFEGKAFHARILKQCCALSGITH 349

Query: 122 N-----YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           N     Y K G + +A   F       +  ++ M+ GY   G+ +K      EM  LG E
Sbjct: 350 NALLSMYCKFGHLGTANKIFHS-FHKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGRE 408

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  SL +V+ +   V     G  IH + +K   +  V   + N++M++Y + G      
Sbjct: 409 PDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS--VANSLMDMYGKSGHVTATW 466

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F    + DV+SW+  I++        EA  LF  +       N+ T I +LS+     
Sbjct: 467 RIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLA 526

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G++I  +  + GF   ++I  ALI MY KCG++  +R +F+    +D + WN MI+
Sbjct: 527 SLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMIS 586

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y  +G    A+++F  M E ++ PN  T  S+L A +++           H+++   L 
Sbjct: 587 NYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHT----------GHVLEGRHLF 636

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D       +  YG   +L     ++  + +  ++               AEAL L   I 
Sbjct: 637 DR------MQKYGIEPSLKHYASIIDLLGRSGSLEA-------------AEALVLSMPI- 676

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG--- 527
                 +G+ +  +L AC    + E G  +   A+++    D +    + D+Y   G   
Sbjct: 677 ----TPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYY-IILSDLYSCLGRWD 731

Query: 528 TIEDAKRAFRKICRDSLAGWNAM 550
            +E  +   +K   +  AGW+A+
Sbjct: 732 EVEKVRDMMKKRGVEKRAGWSAL 754



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  + +NG   +  + T LI  + K  +   + +    T+ RD+I +N +IS      
Sbjct: 533 KIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHG 592

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A+++F  +    ++P+A TF SL+ AC   G + E   +     K G    +   +
Sbjct: 593 HVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYA 652

Query: 118 GFIENYAKSGEIVSAE 133
             I+   +SG + +AE
Sbjct: 653 SIIDLLGRSGSLEAAE 668


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 222/746 (29%), Positives = 387/746 (51%), Gaps = 36/746 (4%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFDRLRYQGLR-PDAF 82
           +F++F+   R             + LIS +     SG    AL+L+  +R  G +  D +
Sbjct: 2   RFSNFQAGLRL------------SDLISKIKDASYSGNWQEALQLYHEIRISGAQLSDTW 49

Query: 83  TFSSLVKACGSLQEN--EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
              S++KAC +   N    +HG  +K G  S   + +  I+ Y K G++ SA+  F    
Sbjct: 50  VLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTK 109

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQ 197
           + D+V++  MV G   NG        F++ R    + N  SL  V+ A  ++K   +G  
Sbjct: 110 NKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFA 169

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAAC- 255
            HG+  + GF S + + + N++++LY        A K+F E++   DVVSWS  I     
Sbjct: 170 FHGYIFRSGF-SAILS-VQNSLLSLYAEVHMYF-AHKLFGEMSVRNDVVSWSVMIGGFVQ 226

Query: 256 --DGVEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
             +  + F +F+++        +  T++++L +    + +  G  +       G  + + 
Sbjct: 227 IGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLF 286

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +GN+LI MY KC  V+ A   F  +  K+ +SWN M++ Y  N    +AL +   M+   
Sbjct: 287 VGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREG 346

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
              +  T+A++L+   +     +   VH  II+ G+  ++ +++ +I  Y KCN +  ++
Sbjct: 347 AEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELAR 406

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI--VLKACAA 490
            V   ++KK+ V  + + +         EA+ +++ +     EV  +  SI  +++ACA 
Sbjct: 407 MVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM---NEEVIPNNVSIMNLMEACAV 463

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
             +L Q K  H +A++     ++ + +++IDMY KCG IE + RAF +I + ++  W+AM
Sbjct: 464 SAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAM 523

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           +  +  +G  HE   LF K+ + G KP+ +T L++L++C H GL+ E  ++ + M   HG
Sbjct: 524 ISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHG 583

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP--IPPDAHIWQSLLSACTIYGNIDLGLL 668
           + P LEHY+CIVD+L R G    A   I+++P  +   A IW +LLS+C  YGNI LG  
Sbjct: 584 IEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSG 643

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           A S++L+L+P + + Y+L SNLYA+ G+  D  K+R+  KEK +    GYS +H+   T 
Sbjct: 644 AASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTW 703

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHM 754
            F AGD  + ++ EIY  + KL+  M
Sbjct: 704 RFVAGDVLNPRADEIYLMVKKLHGVM 729



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 270/578 (46%), Gaps = 31/578 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  LIK G      ++ + I  + K+ D   A R    T+N+D +++N ++ G      
Sbjct: 69  MHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGS 128

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVYL 115
               L  F + R+   +P+    SSL+    + +E +I       HG   + GFS+ + +
Sbjct: 129 IMAGLCWFIKGRFAHFQPN---ISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSV 185

Query: 116 VSGFIENYAKS----GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            +  +  YA+        +  EM  R+    D V+++ M+ G+V  GE ++   +F  M 
Sbjct: 186 QNSLLSLYAEVHMYFAHKLFGEMSVRN----DVVSWSVMIGGFVQIGEDEQGFLMFRNMV 241

Query: 172 S-LGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           +  G+  +  ++ +VL A  ++K+   G  +HG  +  G    +   + N+++++Y +C 
Sbjct: 242 TEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDL--FVGNSLIDMYSKCF 299

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLS 284
               A K F EI E +++SW+  ++A       +EA  L   +     + +E T+ N+L 
Sbjct: 300 NVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQ 359

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                      + +     + G+     + N++I  Y KC  V  AR +FD +  KD V+
Sbjct: 360 IAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVA 419

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W++MIAG++ NG  ++A+ +F  M E  +IPN  ++ +++EA + S  L+Q+   H   +
Sbjct: 420 WSTMIAGFARNGKPDEAISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAV 478

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G   +  + + +I  Y KC  +  S R  ++I +KN V  +A+ S         EAL 
Sbjct: 479 RRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALM 538

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC-LALKARYDQDIFVESAVIDMY 523
           L+  I  +  + N  T   +L AC+    +E+G +    +  K   +  +   S ++DM 
Sbjct: 539 LFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDML 598

Query: 524 CKCGTIEDAKRAFRKICRDSLAG---WNAMMMGYAQHG 558
            + G   +A     K+ ++  AG   W  ++     +G
Sbjct: 599 SRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYG 636



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 40/239 (16%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + + ++ G   +  + T++I  ++K  D   + R       ++++ ++A+IS       +
Sbjct: 474 HGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLA 533

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF--- 119
             AL LF++++  G +P+A T  SL+ AC         HG  ++ G S    +V      
Sbjct: 534 HEALMLFEKIKQNGTKPNAVTALSLLSACS--------HGGLMEEGLSFFTSMVQKHGIE 585

Query: 120 --IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG-YVWNGEFDKSKEVFVEMRSLGLE 176
             +E+Y+   +++S    F + L+L       M  G  +W         +    RS G  
Sbjct: 586 PGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWG-------TLLSSCRSYG-- 636

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
               SL +  GA+  V + E +   G  +               NLY  CG  +D+ KM
Sbjct: 637 --NISLGS--GAASRVLQLEPLSSAGYMLA-------------SNLYANCGLMIDSAKM 678


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 187/576 (32%), Positives = 300/576 (52%), Gaps = 39/576 (6%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFN 270
           N +++ Y +     +  ++F  +   D+VSW+  I+A          V+A+ L   L   
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLM--LYNG 136

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK------- 323
            F +N   +  +L     +  +  G Q+     K GF   V +G+ L+ MY K       
Sbjct: 137 PFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCA 196

Query: 324 ------------------------CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
                                   C ++ D+R +F  +  KDS+SW +MIAG+++NG   
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A+D+F  M   +L  + YT  S+L A     +L++  QVH++II++ +  +  + S L+
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC ++  ++ V  +++ KN V   A+           EA++++  +  +  E +  
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T   V+ +CA +  LE+G   HC AL +     I V +A++ +Y KCG+IED+ R F ++
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
                  W A++ GYAQ G  +E   LF  M   G KPD++T++ VL++C  AGLV++  
Sbjct: 437 SYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGN 496

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
                M   H +IP  +HY C++DL  R G LE A+  I++MP  PDA  W SLLS+C  
Sbjct: 497 QIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRF 556

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
           + N+++G  A   LL+L+P N ++Y+LLS++YA+ G W +V  LRK M++K L KEPG S
Sbjct: 557 HRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCS 616

Query: 720 WIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           WI      H F A D S+  S +IY EL KL   MV
Sbjct: 617 WIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMV 652



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 224/462 (48%), Gaps = 44/462 (9%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL- 77
            TL+S ++K A      R       RD++++N+LIS  A       ++K ++ + Y G  
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 78  ---RPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG------- 127
              R    T   L    G +     VHG  +K GF S V++ S  ++ Y+K+G       
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 128 ------------------------EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                                    I  +   F D  + D++++TAM+ G+  NG   ++
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258

Query: 164 KEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            ++F EMR   LE+++++  +VL   G    ++EG+Q+H + ++  +   +   + +A++
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI--FVGSALV 316

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEY 277
           ++Y +C     A  +F ++   +VVSW+  +          EA  +F D++ N  + +++
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ +++SS      L  G Q        G +  +++ NAL+++YGKCG + D+  +F  +
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
            + D VSW ++++GY++ G  N+ L +F  ML     P+  T   +L A S +  +++  
Sbjct: 437 SYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGN 496

Query: 398 QVHSHIIKSGFLLD-DSMISCLITTYGKCNALNESKRVLSEI 438
           Q+   +IK   ++  +   +C+I  + +   L E+++ ++++
Sbjct: 497 QIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKM 538



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 188/348 (54%), Gaps = 17/348 (4%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  TLI+   + +    + +  +D Q +D I++ A+I+G  +      A+ LF  +R +
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLE 268

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
            L  D +TF S++ ACG   +LQE + VH   ++  +   +++ S  ++ Y K   I SA
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSA 328

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
           E  FR     + V++TAM+ GY  NG  +++ ++F +M++ G+E ++F+L +V+ +  + 
Sbjct: 329 ETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANL 388

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++EG Q H   +  G +S +   ++NA++ LY +CG   D+ ++F E++  D VSW+ 
Sbjct: 389 ASLEEGAQFHCRALVSGLISFIT--VSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTA 446

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            ++         E   LF+ +  + F+ ++ T I +LS+     +++ G QI  F   + 
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI--FESMIK 504

Query: 307 FMEVVSIGN---ALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIA 350
              ++ I +    +I ++ + G++ +AR   + + F  D++ W S+++
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I+  +  +  + + L+  + K    + A         ++++++ A++ G  +  
Sbjct: 295 QVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNG 354

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A+K+F  ++  G+ PD FT  S++ +C    SL+E    H   L  G  S + + +
Sbjct: 355 YSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN 414

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G I  +   F +   +D V++TA+V GY   G+ +++  +F  M + G + 
Sbjct: 415 ALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKP 474

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   VL A      V++G QI    +K   +  + +H    +++L+ R G+  +A K
Sbjct: 475 DKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHY-TCMIDLFSRAGRLEEARK 533

Query: 235 MFDEIT-EPDVVSWSERIAA 253
             +++   PD + W+  +++
Sbjct: 534 FINKMPFSPDAIGWASLLSS 553



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 39/190 (20%)

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C  +      K IHC  +KA  + +IF+ + ++  Y K   I  A+R F ++ + +L  W
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA--------- 598
           N ++  Y++  C  E+  +F+ M       D +++ +++++    G + ++         
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMP----TRDMVSWNSLISAYAGRGFLLQSVKAYNLMLY 134

Query: 599 -------RTYLSCM-------------SDLHGLIPQ--LEHY----ACIVDLLGRVGLLE 632
                  R  LS M               +HG + +   + Y    + +VD+  + GL+ 
Sbjct: 135 NGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVF 194

Query: 633 GAKMTIDQMP 642
            A+   D+MP
Sbjct: 195 CARQAFDEMP 204


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 197/677 (29%), Positives = 348/677 (51%), Gaps = 8/677 (1%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           F+ +   C  +   + +H + +  G +  ++L +  I  YA  G+I  A + F      D
Sbjct: 46  FNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKD 105

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELNEFSLTAVLGASFDVKEGEQIHGFG 202
              + +M+  Y   G F  + + F E  S   L+ + ++   V+ A  ++ +G ++H   
Sbjct: 106 VYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLV 165

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VE 259
           +K+GF   V  ++  + ++ Y R G    A  +FD +   D+ +W+  I+    +G   E
Sbjct: 166 LKLGFECDV--YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAE 223

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  +F ++RF    ++  T+ +LL        + +G  I  +  K+G    + + NALI+
Sbjct: 224 ALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALIN 283

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY K G++  A +IF+ +  +D VSWNS++A + +N     AL ++  M    ++P+  T
Sbjct: 284 MYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLT 343

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           + S+    +   +   +  +H  + +   FL D ++ + +I  Y K   ++ +++V   +
Sbjct: 344 LVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGL 403

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGSTFSIVLKACAAMTDLEQG 497
             K+ +  N+L +         EA+++Y ++ + S    N  T+  +L A + +  L+QG
Sbjct: 404 PVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQG 463

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
              H   +K     DIFV + ++DMY KCG + DA   F ++   S   WNA++  +  H
Sbjct: 464 MKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLH 523

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   +   LF +M   GVKPD IT++++L++C H+GLV E +     M + +G+ P L+H
Sbjct: 524 GYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKH 583

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDL GR G LE A   +  MP+ PD  +W +LL AC I+ N++L       LL+++
Sbjct: 584 YGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVE 643

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
            +N   YVLLSN+YA  G W  V ++R   +++ L K PG+S I V      FY G+ +H
Sbjct: 644 SENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTH 703

Query: 738 SQSKEIYKELIKLYEHM 754
            + +EIY EL  L   M
Sbjct: 704 PKCEEIYSELRNLTAKM 720



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 173/609 (28%), Positives = 314/609 (51%), Gaps = 35/609 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q+++LL+ +G      LS  LI+ +    D   A R  FD  Q +D+ T+N++IS  AR 
Sbjct: 61  QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHA-RLTFDQIQTKDVYTWNSMISAYARI 119

Query: 60  CQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
                A+  F+  L    L+ D +TF  +++ACG+L +   VH + LKLGF   VY+ + 
Sbjct: 120 GHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAAS 179

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
           FI  Y++ G +  A   F + +  D   + AM+ G+  NG+  ++ EVF EMR   + ++
Sbjct: 180 FIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMD 239

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             +++++L       D+  G  IH + +K+G  F   VC    NA++N+Y + G+   A 
Sbjct: 240 SVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVC----NALINMYAKFGELRSAE 295

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+++   D+VSW+  +AA       V A G++  +       +  T+++L S      
Sbjct: 296 TIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELG 355

Query: 291 ILRAGKQIQAFC-YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
              + + I  F   +  F+  +++GNA+I MY K G ++ AR +F+ L  KD +SWNS+I
Sbjct: 356 NFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLI 415

Query: 350 AGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            GYS+NG  N+A+D++  M  +S  +PN  T  SIL A S   +LKQ M+ H  +IK+  
Sbjct: 416 TGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFL 475

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA------EA 462
             D  + +CL+  YGKC  L ++  +  E+  +++V  NA+       SCH       +A
Sbjct: 476 YFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAI------ISCHGLHGYGLKA 529

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           ++L++ +     + +  TF  +L AC+    +++G+    L ++  Y     ++    ++
Sbjct: 530 VKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQL-MQETYGIRPSLKHYGCMV 588

Query: 521 DMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           D++ + G +E A    + +  R  ++ W A++     H     V  + + + K  V+ + 
Sbjct: 589 DLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLK--VESEN 646

Query: 580 ITYLAVLTS 588
           + Y  +L++
Sbjct: 647 VGYYVLLSN 655


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 187/638 (29%), Positives = 341/638 (53%), Gaps = 15/638 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           + +Y + G + +A   F +    D   +  M+ G+V NG F  + + +  M   G+  + 
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 180 FSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+   V+   G  +D+ EGE++HG  +K G    +  ++ N+++ +Y + G    A  +F
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDI--YIGNSLIIMYAKIGCIESAEMVF 184

Query: 237 DEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            E+   D+VSW+  I+   +  DG  +   F++++ +  +++ +++I +L +   E  LR
Sbjct: 185 REMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLR 244

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            GK+I     +      V +  +L+ MY KCG+++ A  +FD +  K  V+WN+MI GYS
Sbjct: 245 NGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS 304

Query: 354 ENGFFNQALDMFCHMLEFS----LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            N    Q+ + F ++ +      L P+  TM ++L   +  +++     VH   I++GFL
Sbjct: 305 LNA---QSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL 361

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
               + + L+  YG+C  L  ++ +  +++++N +  NA+ +       + +A+ L++ +
Sbjct: 362 PHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDL 421

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                + + +T + +L A A +  L + + IH    K + D + FV ++++ MY KCG +
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNL 481

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A+  F ++    +  WN ++M YA HG       LF++M + G +P+  T++++L SC
Sbjct: 482 LRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSC 541

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
             AGLV E   Y + M   + + P +EHY CI+DL+GR G L+ AK  I++MP+ P A I
Sbjct: 542 SVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARI 601

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W SLL+A    G+++L  +A   +L L+ DN   YVLLSN+YA AG W DV +++  MK+
Sbjct: 602 WGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKK 661

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + L K  G S + +   T  F   D S ++   +Y  L
Sbjct: 662 EGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVL 699



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 270/527 (51%), Gaps = 15/527 (2%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           T  +S + +    + A     + +  D   +N +I G         A+  + R+ + G+R
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 79  PDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D FT+  ++KACG    L E E VHG  +K G    +Y+ +  I  YAK G I SAEM 
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFD--V 192
           FR+    D V++ +M+ GYV  G+  +S   F EM++ G++L+ FS+  +LGA S +  +
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           + G++IH   ++      V   +  +++++Y +CG+   A ++FD+IT+  +V+W+  I 
Sbjct: 244 RNGKEIHCQMMRSRLELDVM--VQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIG 301

Query: 253 AACDGVEAFGLFKDLRF----NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                 ++F  F  +R          +  TMINLL        +  GK +  F  + GF+
Sbjct: 302 GYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL 361

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + +  AL+ MYG+CG++  A  +F  +  ++ +SWN+MIA Y++NG   +A+ +F  +
Sbjct: 362 PHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDL 421

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
              +L P+  T+ASIL A +   SL++A Q+H ++ K     +  + + ++  YGKC  L
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNL 481

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             ++ +   +  K+ +  N +            ++EL+  +     E NGSTF  +L +C
Sbjct: 482 LRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSC 541

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
           +    + +G   +  ++K  Y+ +  +E    ++D+  + G ++ AK
Sbjct: 542 SVAGLVNEGWE-YFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAK 587



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 224/450 (49%), Gaps = 15/450 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IK+G  LD  +  +LI  + K      A     +   RD++++N++ISG     
Sbjct: 147 RVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVG 206

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               +L  F  ++  G++ D F+   ++ AC   G L+  + +H   ++      V + +
Sbjct: 207 DGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQT 266

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LE 176
             ++ YAK G +  AE  F    D   VA+ AM+ GY  N +  +S     +M+  G L 
Sbjct: 267 SLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLH 326

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  ++  +L     ++    G+ +HGF ++ GFL  +   L  A++++Y  CG+   A 
Sbjct: 327 PDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLV--LETALVDMYGECGKLKPAE 384

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F ++ E +++SW+  IA+     E   A  LF+DL     + +  T+ ++L +     
Sbjct: 385 CLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELA 444

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            LR  +QI  +  K+       + N+++ MYGKCG +  AR IFD + FKD +SWN++I 
Sbjct: 445 SLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIM 504

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
            Y+ +GF   ++++F  M E    PNG T  S+L + S +  + +  + + + +K  + +
Sbjct: 505 AYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWE-YFNSMKRDYNI 563

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEI 438
           +  +    C++   G+   L+ +K  + E+
Sbjct: 564 NPGIEHYGCILDLIGRTGNLDHAKNFIEEM 593


>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 849

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 226/810 (27%), Positives = 395/810 (48%), Gaps = 66/810 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           ++  + K GH     +S ++++ + K     D ++ FR      + D + +N +++GL+ 
Sbjct: 43  LHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFR---QMDSVDPVVWNIVLTGLSV 99

Query: 59  FCQSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVY 114
            C     ++ F  + +    +P + TF+ L+  C  L ++   + +H   +K G      
Sbjct: 100 SC-GRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDTL 158

Query: 115 LVSGFIENYAKSGEIVS-AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           + +  +  YAK G I+  A   F D  D D V++ A++ G+  N     +   F  M   
Sbjct: 159 VGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLMLKE 218

Query: 174 GLELNEFSLTAVL------GASFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYV 224
             E N  ++  VL      G +   + G QIH + V+  +L     VCN L    ++ Y+
Sbjct: 219 PTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSL----VSFYL 274

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDL-RFNDFQINEYTMI 280
           R G+  +A  +F  +   D+VSW+  IA      E   A  LF +L +  D  ++  T++
Sbjct: 275 RVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDSVTIL 334

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++L        L  GK+I ++  +  ++ E  S+GNALIS Y + G  + A   F  +  
Sbjct: 335 SILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSM 394

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD +SWN+++  ++++    Q L++  H+   ++  +  T+ S+L+  +N + + +  +V
Sbjct: 395 KDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEV 454

Query: 400 HSHIIKSGFLLDD---SMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVY 455
           H + +K+G L ++    + + L+  Y KC  +  + ++   + +++  V  N+L S  V 
Sbjct: 455 HGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVN 514

Query: 456 ASCHAEALELYR-------TIW-----------------GSCREV-------NGSTFSIV 484
           +  H +A  L+        T W                 G  RE+       N  T   +
Sbjct: 515 SGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNL 574

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L  CA +  L   +  H   ++ R   DI ++  ++D+Y KCG+++ A   F+   R  L
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGRLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDL 633

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             + AM+ GYA HG   E   +F+ M    +KPD +    +LT+CCHAGL+++       
Sbjct: 634 VMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHVFITTLLTACCHAGLIQDGLQIYDS 693

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           +  +HG+ P +E YAC VDLL R G L+ A   I QMP+ P+A+IW +LL ACT Y  +D
Sbjct: 694 IRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGTLLRACTTYNRMD 753

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           LG    + LL+ + D+   +VL+SN+YA+   W  V +LR  MK+K + K  G SW+ V 
Sbjct: 754 LGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVD 813

Query: 725 GYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G    F +GD SH +   I+  +  LY  M
Sbjct: 814 GKRDVFVSGDCSHPRRDSIFDLVNALYLQM 843



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 155/674 (22%), Positives = 310/674 (45%), Gaps = 74/674 (10%)

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G   D   F  +VKAC S+ E      +HG   KLG  +   +    +  YAK   +   
Sbjct: 16  GFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDC 75

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT--------A 184
           +  FR    +D V +  ++ G   +    +    F +      E    S+T         
Sbjct: 76  QKMFRQMDSVDPVVWNIVLTGL--SVSCGRETMRFFKAMHFADEPKPSSVTFAILLPVCV 133

Query: 185 VLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPD 243
            LG S++   G+ +H + +K G        + NA++++Y + G  + DA   FD+I + D
Sbjct: 134 RLGDSYN---GKSMHSYIIKTGLEKDTL--VGNALVSMYAKFGYIIPDAFTAFDDIADKD 188

Query: 244 VVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL---SSVGGERILRAGKQ 297
           VVSW+  IA   +     +AF  F  +     + N  T+ N+L   +S+G     R+G+Q
Sbjct: 189 VVSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQ 248

Query: 298 IQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           I ++  +  +++  V + N+L+S Y + G++ +A S+F  +  KD VSWN +IAGY+ N 
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNH 308

Query: 357 FFNQALDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
            + +AL +F ++++   +  +  T+ SIL   +    L    ++HS+I++  +LL+D+ +
Sbjct: 309 EWLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSV 368

Query: 416 -SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + LI+ Y +    + +    S +  K+ +  NA+      +    + L L   ++    
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAI 428

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA---RYDQDIFVESAVIDMYCKCGTIED 531
            ++  T   +LK C  +  + + K +H  ++KA     +++  + +A++D Y KCG +E 
Sbjct: 429 TLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEY 488

Query: 532 AKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF----------------- 573
           A + F+ +  R +L  +N+++ GY   G + +   LF++MS                   
Sbjct: 489 AHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCF 548

Query: 574 --------------GVKPDEITYLAVLTSCCHAG---LVREARTYLSCMSDLHGLIPQLE 616
                         G++P+ +T + +L  C       LVR+   Y+     + G +  + 
Sbjct: 549 PNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI-----IRGRLGDIR 603

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE- 675
               ++D+  + G L+ A  ++ Q     D  ++ ++++   ++G     L+  S +++ 
Sbjct: 604 LKGTLLDVYAKCGSLKHA-YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDS 662

Query: 676 -LQPDNESTYVLLS 688
            ++PD+     LL+
Sbjct: 663 NIKPDHVFITTLLT 676


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 164/431 (38%), Positives = 250/431 (58%), Gaps = 1/431 (0%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + N +++MY KCG ++DAR +FD +  KD V+W ++IAG+S+N     AL +F  ML   
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           L PN +T++S+L+A  +   L    Q+H+  +K G+     + S L+  Y +C  ++ ++
Sbjct: 185 LQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
                +  K+ V  NAL S          AL L   +     +    T+S V  ACA++ 
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIG 304

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            LEQGK +H   +K+      F+ + ++DMY K G+I+DAKR F ++ +  +  WN M+ 
Sbjct: 305 ALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT 364

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G AQHG   E  + F +M + G++P+EI++L VLT+C H+GL+ E   Y   M   + + 
Sbjct: 365 GCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVE 423

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P + HY   VDLLGRVGLL+ A+  I +MPI P A +W +LL AC ++ N++LG+ A  +
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAER 483

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
             EL P +    +LLSN+YASAG W DV K+RK MKE  + K+P  SW+ +    H F A
Sbjct: 484 AFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVA 543

Query: 733 GDSSHSQSKEI 743
            D +H Q KEI
Sbjct: 544 NDETHPQIKEI 554



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 9/366 (2%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
           V++G  +H   V   FL    NHL   N I+N+Y +CG   DA +MFDE+   D+V+W+ 
Sbjct: 103 VEQGRIVHAHLVDSHFLD---NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTA 159

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            IA         +A  LF  +     Q N +T+ +LL + G E  L  G Q+ AFC K G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           +   V +G+AL+ MY +CG ++ A+  FD +  K  VSWN++I+G++  G    AL +  
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M   +  P  +T +S+  A ++  +L+Q   VH+H+IKSG  L   + + L+  Y K  
Sbjct: 280 KMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           +++++KRV   + K + V  N + +         E L+ +  +     E N  +F  VL 
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           AC+    L++G     L  K + + D+      +D+  + G ++ A+R  R++  +  A 
Sbjct: 400 ACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459

Query: 547 -WNAMM 551
            W A++
Sbjct: 460 VWGALL 465



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 194/396 (48%), Gaps = 16/396 (4%)

Query: 56  LARFCQS--GPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS 110
           L R  QS  G  L   D ++   L PD   +S L+K C   G +++  IVH   +   F 
Sbjct: 60  LLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFL 119

Query: 111 SRVYLVSGFIEN-YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
               ++   I N YAK G +  A   F +    D V +TA++ G+  N     +  +F +
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179

Query: 170 MRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M  LGL+ N F+L+++L   G+   +  G Q+H F +K G+ S V  ++ +A++++Y RC
Sbjct: 180 MLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV--YVGSALVDMYARC 237

Query: 227 GQKLDAVKM-FDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           G  +DA ++ FD +     VSW+  I   A   +G  A  L   ++  +FQ   +T  ++
Sbjct: 238 GH-MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
            S+      L  GK + A   K G   +  IGN L+ MY K G ++DA+ +FD L+  D 
Sbjct: 297 FSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN+M+ G +++G   + LD F  ML   + PN  +   +L A S+S  L + +     
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           + K     D       +   G+   L+ ++R + E+
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 178/380 (46%), Gaps = 16/380 (4%)

Query: 9   NGHHLDP--ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           + H LD   +L   +++ + K      A R   +   +D++T+ ALI+G ++  +   AL
Sbjct: 115 DSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDAL 174

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
            LF ++   GL+P+ FT SSL+KA GS   L     +H  CLK G+ S VY+ S  ++ Y
Sbjct: 175 LLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY 234

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           A+ G + +A++ F        V++ A++ G+   GE + +  +  +M+    +   F+ +
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYS 294

Query: 184 AVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +V  A   +   ++G+ +H   +K G    +   + N ++++Y + G   DA ++FD + 
Sbjct: 295 SVFSACASIGALEQGKWVHAHMIKSGL--KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV 352

Query: 241 EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           +PDVVSW+  +        G E    F+ +     + NE + + +L++     +L  G  
Sbjct: 353 KPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLY 412

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMIAGYSENG 356
                 K      V      + + G+ G ++ A R I +  I   +  W +++     + 
Sbjct: 413 YFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHK 472

Query: 357 FFNQALDMFCHMLEFSLIPN 376
             N  L ++     F L P+
Sbjct: 473 --NMELGVYAAERAFELDPH 490



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 150/296 (50%), Gaps = 13/296 (4%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALN 429
           SL+P+    + +L+  +    ++Q   VH+H++ S F LD+ ++  + ++  Y KC  L+
Sbjct: 82  SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLD 140

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           +++R+  E+  K+ V   AL +     +   +AL L+  +     + N  T S +LKA  
Sbjct: 141 DARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASG 200

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           +   L+ G  +H   LK  Y   ++V SA++DMY +CG ++ A+ AF  +   S   WNA
Sbjct: 201 SEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNA 260

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++ G+A+ G      +L  KM +   +P   TY +V ++C   G + + +   +     H
Sbjct: 261 LISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHA-----H 315

Query: 610 GLIPQLEHYACI----VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            +   L+  A I    +D+  + G ++ AK   D++ + PD   W ++L+ C  +G
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 131/273 (47%), Gaps = 13/273 (4%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +S +LK C  +  +EQG+ +H   + + + D  + +++ +++MY KCG ++DA+R F ++
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL-TSCCHAGLVREA 598
               +  W A++ G++Q+    +   LF +M + G++P+  T  ++L  S    GL    
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGT 209

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           + +  C+   +G    +   + +VD+  R G ++ A++  D MP   +   W +L+S   
Sbjct: 210 QLHAFCLK--YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALISGHA 266

Query: 659 IYGNIDLGLLAGSKLLELQPDN-ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
             G    G  A   L ++Q  N + T+   S+++++      +G L +         + G
Sbjct: 267 RKGE---GEHALHLLWKMQRKNFQPTHFTYSSVFSACA---SIGALEQGKWVHAHMIKSG 320

Query: 718 YSWI-HVGGYTHHFYAGDSSHSQSKEIYKELIK 749
              I  +G      YA   S   +K ++  L+K
Sbjct: 321 LKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVK 353



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 3/140 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ +IK+G  L   +  TL+  + K      A R        D++++N +++G A+   
Sbjct: 312 VHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGL 371

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
               L  F+++   G+ P+  +F  ++ AC   G L E      +  K      V     
Sbjct: 372 GKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVT 431

Query: 119 FIENYAKSGEIVSAEMCFRD 138
           F++   + G +  AE   R+
Sbjct: 432 FVDLLGRVGLLDRAERFIRE 451


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 181/644 (28%), Positives = 346/644 (53%), Gaps = 13/644 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  + K G++  A   F   ++   V++T ++ GY+ + +  ++  ++ +MR  G+E + 
Sbjct: 81  ISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDY 140

Query: 180 FSLTAVLGASFDVKEGE---QIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVK 234
            +L  +L    +++      QIH   +K+G+     VCN L +A    Y +      A +
Sbjct: 141 VTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDA----YCKTHCLYLASQ 196

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   D V+++  +   + +G+  EA  LF +L  +  + +++T   LLS+  G   
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            + G+Q+  F  K  F+  V +GNAL+  Y K  QV++   +F  +   D +S+N +I  
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITS 316

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ NG F ++ D+F  +         +  A++L   ++S +L+   Q+H   I  G   +
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE 376

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KCN   E++++   I  K+ V   A+ S  V    H E + ++  +  
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +    + +TF+ +L+ACA +  +  G+ +H L +++ +  +++  SA++D Y KCG + D
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A ++F ++   +   WNA++  YAQ+G      N F +M + G KPD +++L+VL++C H
Sbjct: 497 AIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G V EA  + + M+ ++ + P+ EHY  +VD+L R G  + A+  + +MP  P   +W 
Sbjct: 557 CGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWS 616

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           S+L++C I+ N +L   A  +L  ++   + + Y+ +SN+YA AG W++V K++K M+++
Sbjct: 617 SVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDR 676

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + K P YSW+ +   TH F A D SH + K+I +++  L + M
Sbjct: 677 GVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEM 720



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 214/406 (52%), Gaps = 11/406 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK G+  + ++  +L+  + K      A +      N+D +T+N+L++G +   
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEG 220

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  A++LF  L   G++P  FTF++L+ A   L + +    VHG  LK  F   V++ +
Sbjct: 221 LNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K  ++      F +  +LD ++Y  ++  Y WNG+F +S ++F +++    + 
Sbjct: 281 ALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR 340

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +F   +L ++  +S +++ G QIH   + VG  +   + + NA++++Y +C    +A K
Sbjct: 341 RQFPFATLLSIATSSLNLRMGRQIHCQAITVG--ANFESRVENALVDMYAKCNGDKEAQK 398

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD I     V W+  I+A        E   +F D+R      ++ T  ++L +      
Sbjct: 399 IFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLAS 458

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ +   + GFM  V  G+AL+  Y KCG + DA   F  +  ++SVSWN++I+ 
Sbjct: 459 ISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISA 518

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           Y++NG  +  L+ F  M++    P+  +  S+L A S+   +++A+
Sbjct: 519 YAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 239/477 (50%), Gaps = 7/477 (1%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQ 273
           N +++ +++ G+   A ++FD + E   VSW+  I     +    EAF L+ D+R    +
Sbjct: 78  NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIE 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T++ LLS  G         QI     K+G+   + + N+L+  Y K   +  A  +
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQL 197

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F +++ KD+V++NS++ GYS  G   +A+++F  +    + P+ +T A++L A       
Sbjct: 198 FKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDT 257

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           K   QVH  ++K+ F+ +  + + L+  Y K + ++E  ++  E+ + + +  N + +  
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSY 317

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
            +     E+ +L+R +  +  +     F+ +L    +  +L  G+ IHC A+    + + 
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            VE+A++DMY KC   ++A++ F  I   S   W AM+  Y Q G + E  N+F+ M + 
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           GV  D+ T+ ++L +C +   +   R   S +    G +  +   + ++D   + G +  
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIR-SGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
           A  +  +MP   ++  W +L+SA    GN+D  L +  ++++   +PD+ S   +LS
Sbjct: 497 AIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 180/544 (33%), Positives = 292/544 (53%), Gaps = 4/544 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFN- 270
           ++ A++N+Y + G   DA  +FDE+   + VSW+  +A         EAF LF+ +    
Sbjct: 155 VSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGEC 214

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
               NE+    +LS++     L  G Q+     K G +  VS+ N+L++MY K G ++ A
Sbjct: 215 PLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAA 274

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F+    ++S++W++MI GYS+NG    A+ MF  M      P  +T+  +L A S+ 
Sbjct: 275 FHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDV 334

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            +L +  Q H  ++K GF +   + S L+  Y KC  + ++K   ++  + + V   A+ 
Sbjct: 335 GTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMV 394

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +  V      +AL LY  +       N  T + +L+ACA +  LE GK +H   LK  + 
Sbjct: 395 TGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFG 454

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
               V SA+  MY KCG +ED    FR++    +  WN+++ G++Q+G  ++  NLF +M
Sbjct: 455 LGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEM 514

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              G  PD +T++ VL +C H GLV    TY   M   +GL P+L+HYAC+VD+L R G+
Sbjct: 515 KLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGM 574

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           L  AK  I+ + I     +W+ +L AC    + D+G  AG KL++L   + + Y+LLSN+
Sbjct: 575 LSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNI 634

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           YA+   WNDV ++R  MK   + K+PG SW+ +    H F  G+  H  ++ I  EL +L
Sbjct: 635 YAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRL 694

Query: 751 YEHM 754
            +HM
Sbjct: 695 GKHM 698



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 164/615 (26%), Positives = 273/615 (44%), Gaps = 50/615 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADF--RRAFRFLFD--TQNRDIITYNALISGLA 57
           +++  +K+G      +S +LI+ ++ F       AF    D     RD+ ++N+L++ L+
Sbjct: 34  LHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNPLS 93

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKL-GFSSRV 113
                         L    + P   +F++   A           +VH +  KL   SS V
Sbjct: 94  HHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSNV 153

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  +  Y K G I  A++ F +    + V++ AMV GY       ++ E+F +M  L
Sbjct: 154 FVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM--L 211

Query: 174 G---LELNEFSLTAVLGA---SFDVKEGEQIHGFGVK---VGFLSGVCNHLNNAIMNLYV 224
           G   L  NEF  TAVL A      +  G Q+HG  VK   VGF+S     + N+++ +Y 
Sbjct: 212 GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVS-----VENSLVTMYA 266

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMIN 281
           + G    A  +F+   E + ++WS  I       +   A  +F  +    F   E+T++ 
Sbjct: 267 KAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVG 326

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L++      L  GKQ      K+GF   V + +AL+ MY KCG + DA+  F+     D
Sbjct: 327 VLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELD 386

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V W +M+ G+ +NG F QAL ++  M +  + PN  T+ S+L A +   +L+   Q+H+
Sbjct: 387 IVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHT 446

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            I+K GF L  S+ S L T Y KC  L +   V   +  ++ +  N++ S         +
Sbjct: 447 QILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGND 506

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALKARYDQ----- 511
           A+ L+  +       +  TF  VL AC+ M  +++G       I    L  R D      
Sbjct: 507 AINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMV 566

Query: 512 DI------------FVESAVIDM-YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           DI            F+ES  ID   C    +  A R+ R     + AG   M +G     
Sbjct: 567 DILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSA 626

Query: 559 CYHEVSNLFNKMSKF 573
            Y  +SN++    K+
Sbjct: 627 AYILLSNIYAAQRKW 641



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 160/292 (54%), Gaps = 11/292 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L++K+G      +  +L++ + K      AF     ++ R+ IT++A+I+G ++  
Sbjct: 241 QVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNG 300

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +  A+++F ++   G  P  FT   ++ AC   G+L E +  HG+ +KLGF  +VY+ S
Sbjct: 301 NAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKS 360

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G I  A+ CF    +LD V +TAMV G+V NGEF+++  ++  M   G+  
Sbjct: 361 ALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFP 420

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++T++L A      ++ G+Q+H   +K GF  G+   + +A+  +Y +CG   D + 
Sbjct: 421 NTLTITSLLRACAGLAALEPGKQLHTQILKFGF--GLGASVGSALSTMYSKCGNLEDGMV 478

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
           +F  +   DV++W+  I+       G +A  LF++++      +  T IN+L
Sbjct: 479 VFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVL 530


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 201/729 (27%), Positives = 366/729 (50%), Gaps = 24/729 (3%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEI 99
           +R   ++N  I+  AR      AL++F  +  +G+ PD  +  +++ A    G L + E 
Sbjct: 3   DRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEF 62

Query: 100 VH-GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
            H  VC   G  S V + +  +  Y + G +  A   F   +  + V+++AM+  Y   G
Sbjct: 63  FHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRG 122

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
               + E+FV M   G++ N  +  +VL A   ++    G+ IH   V  G L G    L
Sbjct: 123 HPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLL-GDDVIL 181

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDF 272
            N I+N+Y +CG+   A ++F+ +   + V+W+  IAA        EAF L  ++  +  
Sbjct: 182 GNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGL 241

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + N+ T+++++ +    + +  G+ +       G     ++ NAL+++YGKCG++  AR 
Sbjct: 242 RPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARH 301

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
             + +  +D +SW +++A Y+ +G   +A+ +   M    +  + +T  ++LE+     +
Sbjct: 302 ALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAA 361

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALAS 451
           L    ++H  + +SG  LD  + + L+  YGKC   + ++R    + D ++    NAL +
Sbjct: 362 LALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLA 421

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL-KARYD 510
             V      E L ++  +       +  TF  +L ACA++  L  G+  H   L +  +D
Sbjct: 422 AYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFD 481

Query: 511 QDI-----FVESAVIDMYCKCGTIEDAKRAFRKICR---DSLAGWNAMMMGYAQHGCYHE 562
           +        + ++VI+MY KCG++ DAK  F K  R     +  W+AM+  Y+Q G   E
Sbjct: 482 RQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEE 541

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
               F  M + GVKPD +++++ +  C H+GLVREA  + + +   HG+ P   H+AC+V
Sbjct: 542 ALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLV 601

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES 682
           DLL R G +  A+  + + P+      W +LLSAC  YG+++      ++L  L+  + S
Sbjct: 602 DLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASLR--SGS 659

Query: 683 TYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS-HSQSK 741
            Y LL++++  +  W+DV   R+ + E+    +PG SWI +    + F+AGD     + +
Sbjct: 660 AYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREE 719

Query: 742 EIYKELIKL 750
           EI+ EL +L
Sbjct: 720 EIFAELERL 728



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 248/553 (44%), Gaps = 37/553 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +++T +++ + +      A R       R++++++A+I+  A+    G AL+LF R+ 
Sbjct: 76  DVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMD 135

Query: 74  YQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLG-FSSRVYLVSGFIENYAKSGEI 129
           ++G++ +A TF S++ AC S++     + +H   +  G     V L +  +  Y K GE+
Sbjct: 136 HEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEV 195

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV---EMRSLGLELNEFSLTAVL 186
             A   F      + V +  M+         D+ KE F    EM   GL  N+ +L +V+
Sbjct: 196 DLAREVFERMEAKNAVTWNTMIAAC---SRHDRYKEAFALLGEMDLDGLRPNKITLVSVI 252

Query: 187 GASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            A      +  G  +H      G  S   N + NA++NLY +CG+   A    + I   D
Sbjct: 253 DACAWMQSIVRGRIVHEIVAGEGLESD--NTVANALVNLYGKCGKLRAARHALEGIETRD 310

Query: 244 VVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
            +SW+  +AA      G  A  + K +     +++ +T +NLL S      L  G++I  
Sbjct: 311 KISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHD 370

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFN 359
              + G      +  AL+ MYGKCG  + AR  FD +   +D   WN+++A Y       
Sbjct: 371 RLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGK 430

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD-------D 412
           + L +F  M    + P+  T  SIL+A ++  +L      HS +++ G L D       D
Sbjct: 431 ETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERG-LFDRQAVASAD 489

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS---CHAEALELYRTI 469
            + + +I  Y KC +L ++K   ++  +  A  + A ++++   S      EAL  + ++
Sbjct: 490 LLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSM 549

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA----VIDMYCK 525
                + +  +F   +  C+    + +  A        R+D  I    A    ++D+  +
Sbjct: 550 QQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFT---SLRHDHGIAPTEAHFACLVDLLSR 606

Query: 526 CGTIEDAKRAFRK 538
            G I +A+   R+
Sbjct: 607 AGWIREAEALMRR 619



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ ++   G   D  ++  L++ + K    R A   L   + RD I++  L++  AR   
Sbjct: 267 VHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 326

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
              A+ +  R+ ++G++ D+FTF +L+++C    +L   E +H    + G      L + 
Sbjct: 327 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTA 386

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            ++ Y K G   +A   F    D+ +V  + A++  YV   +  ++  +F  M   G+  
Sbjct: 387 LVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAP 446

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLS----GVCNHLNNAIMNLYVRCGQKL 230
           +  +  ++L A   +     G   H   ++ G          + L  +++N+Y +CG   
Sbjct: 447 DAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLA 506

Query: 231 DAVKMFDEITEP---DVVSWSERIAA 253
           DA   F +       DVV+WS  +AA
Sbjct: 507 DAKAEFAKARRARASDVVAWSAMVAA 532


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 164/466 (35%), Positives = 261/466 (56%), Gaps = 3/466 (0%)

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
           G R LR G+Q+ A     G+   + +   L+ MY +CG + DA ++ D +  ++ VSW +
Sbjct: 47  GRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTA 106

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM--QVHSHIIK 405
           MI+GYS+N    +A D+F  ML     PN +T+AS+L + + S+ + Q    QVH+  IK
Sbjct: 107 MISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIK 166

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             F L   + S L+  Y +   + E++RV   +  ++ V    + S         EAL L
Sbjct: 167 KNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNL 226

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +R ++    + N  TFS++L A + ++ ++ GK +H L L+      + +++++IDMY K
Sbjct: 227 FRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSK 286

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG +  ++R F  +   S+  WNAM+MGY +HG  +EV  LF  M    VKPD +T LAV
Sbjct: 287 CGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KVKPDSVTLLAV 345

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L    H GLV E       +      +   +HY C++DLLGR G LE A + I +MP  P
Sbjct: 346 LLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQP 405

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
              IW SLL AC ++ N+ +G     KL +++P+N   YV+LSN+YA+A MW DV +LRK
Sbjct: 406 TRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRK 465

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
            M +K + KEPG SW+ +    H F++ +  H + ++I  ++ ++Y
Sbjct: 466 LMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIY 511



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 187/378 (49%), Gaps = 14/378 (3%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L+E   VH   +  G+   +YL +  +  YA+ G +  A        + + V++TAM+ 
Sbjct: 50  ALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMIS 109

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGF 207
           GY  N    ++ ++F+ M   G E NEF+L +VL +          + +Q+H F +K  F
Sbjct: 110 GYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNF 169

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLF 264
              +   + ++++++Y R     +A ++FD +   DVVS++  ++         EA  LF
Sbjct: 170 --ELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLF 227

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + L     Q N+ T   LL+++ G   +  GKQ+     +      +++ N+LI MY KC
Sbjct: 228 RQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKC 287

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G++  +R +FD +  +  VSWN+M+ GY  +G   + + +F  M +  + P+  T+ ++L
Sbjct: 288 GKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KVKPDSVTLLAVL 346

Query: 385 EAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEI--DKK 441
              S+   + + + +  HI+K    LL+     C+I   G+   L ++  ++ ++     
Sbjct: 347 LGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPT 406

Query: 442 NAVHINALASVLVYASCH 459
            A+  + L +  V+A+ H
Sbjct: 407 RAIWGSLLGACRVHANVH 424



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 177/371 (47%), Gaps = 30/371 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++  G+     L+T L+  + +      A   L     R+++++ A+ISG ++  
Sbjct: 56  QVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQNE 115

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEI--VHGVCLKLGFSSRVYL 115
           +   A  LF  +   G  P+ FT +S++ +C   Q   +++I  VH   +K  F   +++
Sbjct: 116 RPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFV 175

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  ++ YA+S  I  A   F      D V+YT ++ GY   G  +++  +F ++ + G+
Sbjct: 176 GSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGM 235

Query: 176 ELNEFSLTAVLGA-----SFDVKEGEQIHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQ 228
           + N+ + + +L A     S D   G+Q+HG  ++  + F       L N+++++Y +CG+
Sbjct: 236 QCNQVTFSVLLNALSGLSSMDY--GKQVHGLILRRELPFFMA----LQNSLIDMYSKCGK 289

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRF--NDFQINEYTMINLLSSV 286
            L + ++FD + E  VVSW+  +        A+ + +  RF  +  + +  T++ +L   
Sbjct: 290 LLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKVKPDSVTLLAVLLGY 349

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNA-----LISMYGKCGQVNDARSIFDYLIFKD 341
               ++  G  +     K    E  ++ N      +I + G+ GQ+  A  +   + F+ 
Sbjct: 350 SHGGLVDEGLDMFDHIVK----EQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQP 405

Query: 342 SVS-WNSMIAG 351
           + + W S++  
Sbjct: 406 TRAIWGSLLGA 416


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 163/431 (37%), Positives = 250/431 (58%), Gaps = 1/431 (0%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + N +++MY KCG ++DAR +FD +  KD V+W ++IAG+S+N     AL +F  ML   
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
             PN +T++S+L+A  +   L    Q+H+  +K G+     + S L+  Y +C  ++ ++
Sbjct: 185 FQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
                +  K+ V  NAL S          AL L   +     +    T+S VL ACA++ 
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIG 304

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            LEQGK +H   +K+      F+ + ++DMY K G+I+DAKR F ++ +  +  WN M+ 
Sbjct: 305 ALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT 364

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G AQHG   E  + F +M + G++P+EI++L VLT+C H+GL+ E   Y   M   + + 
Sbjct: 365 GCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVE 423

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P + HY   VDLLGRVGLL+ A+  I +MPI P A +W +LL AC ++ N++LG+ A  +
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAER 483

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
             EL P +    +LLSN+YASAG W DV K+RK MKE  + K+P  SW+ +    H F A
Sbjct: 484 AFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVA 543

Query: 733 GDSSHSQSKEI 743
            D +H + KEI
Sbjct: 544 NDETHPRIKEI 554



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 189/366 (51%), Gaps = 9/366 (2%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
           V++G  +H   V   FL    NHL   N I+N+Y +CG   DA +MFDE+   D+V+W+ 
Sbjct: 103 VEQGRIVHAHLVDSHFLD---NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTA 159

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            IA         +A  LF  +    FQ N +T+ +LL + G E  L  G Q+ AFC K G
Sbjct: 160 LIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG 219

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           +   V +G+AL+ MY +CG ++ A+  FD +  K  VSWN++I+G++  G    AL +  
Sbjct: 220 YQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLW 279

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M   +  P  +T +S+L A ++  +L+Q   VH+H+IKSG  L   + + L+  Y K  
Sbjct: 280 KMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAG 339

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           +++++KRV   + K + V  N + +         E L+ +  +     E N  +F  VL 
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           AC+    L++G     L  K + + D+      +D+  + G ++ A+R  R++  +  A 
Sbjct: 400 ACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459

Query: 547 -WNAMM 551
            W A++
Sbjct: 460 VWGALL 465



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 194/396 (48%), Gaps = 16/396 (4%)

Query: 56  LARFCQS--GPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS 110
           L R  QS  G  L   D ++   L PD   +S L+K C   G +++  IVH   +   F 
Sbjct: 60  LLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFL 119

Query: 111 SRVYLVSGFIEN-YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
               ++   I N YAK G +  A   F +    D V +TA++ G+  N     +  +F +
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179

Query: 170 MRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M  LG + N F+L+++L   G+   +  G Q+H F +K G+ S V  ++ +A++++Y RC
Sbjct: 180 MLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV--YVGSALVDMYARC 237

Query: 227 GQKLDAVKM-FDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           G  +DA ++ FD +     VSW+  I   A   +G  A  L   ++  +FQ   +T  ++
Sbjct: 238 GH-MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSV 296

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           LS+      L  GK + A   K G   +  IGN L+ MY K G ++DA+ +FD L+  D 
Sbjct: 297 LSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDV 356

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           VSWN+M+ G +++G   + LD F  ML   + PN  +   +L A S+S  L + +     
Sbjct: 357 VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFEL 416

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           + K     D       +   G+   L+ ++R + E+
Sbjct: 417 MKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM 452



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 169/355 (47%), Gaps = 14/355 (3%)

Query: 9   NGHHLDP--ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           + H LD   +L   +++ + K      A R   +   +D++T+ ALI+G ++  +   AL
Sbjct: 115 DSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDAL 174

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
            LF ++   G +P+ FT SSL+KA GS   L     +H  CLK G+ S VY+ S  ++ Y
Sbjct: 175 LLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY 234

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           A+ G + +A++ F        V++ A++ G+   GE + +  +  +M+    +   F+ +
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYS 294

Query: 184 AVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +VL A   +   ++G+ +H   +K G    +   + N ++++Y + G   DA ++FD + 
Sbjct: 295 SVLSACASIGALEQGKWVHAHMIKSGL--KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV 352

Query: 241 EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           +PDVVSW+  +        G E    F+ +     + NE + + +L++     +L  G  
Sbjct: 353 KPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLY 412

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMIAG 351
                 K      V      + + G+ G ++ A R I +  I   +  W +++  
Sbjct: 413 YFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGA 467



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 151/296 (51%), Gaps = 13/296 (4%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALN 429
           SL+P+    + +L+  +    ++Q   VH+H++ S F LD+ ++  + ++  Y KC  L+
Sbjct: 82  SLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKCGCLD 140

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           +++R+  E+  K+ V   AL +     +   +AL L+  +     + N  T S +LKA  
Sbjct: 141 DARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASG 200

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           +   L+ G  +H   LK  Y   ++V SA++DMY +CG ++ A+ AF  +   S   WNA
Sbjct: 201 SEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNA 260

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++ G+A+ G      +L  KM +   +P   TY +VL++C   G + + +   +     H
Sbjct: 261 LISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHA-----H 315

Query: 610 GLIPQLEHYACI----VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            +   L+  A I    +D+  + G ++ AK   D++ + PD   W ++L+ C  +G
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 102/202 (50%), Gaps = 7/202 (3%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +S +LK C  +  +EQG+ +H   + + + D  + +++ +++MY KCG ++DA+R F ++
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL-TSCCHAGLVREA 598
               +  W A++ G++Q+    +   LF +M + G +P+  T  ++L  S    GL    
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGT 209

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           + +  C+   +G    +   + +VD+  R G ++ A++  D MP   +   W +L+S   
Sbjct: 210 QLHAFCLK--YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALISGHA 266

Query: 659 IYGNID--LGLLAGSKLLELQP 678
             G  +  L LL   +    QP
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQP 288


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 172/456 (37%), Positives = 260/456 (57%), Gaps = 5/456 (1%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +R GK++    +  G+     + N LI+MY K   + +A+ +FD +  ++ VSW +MI+ 
Sbjct: 301 VREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISA 360

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS     ++A+ +   M    ++PN +T +S+L A      LKQ   +HS I+K G   D
Sbjct: 361 YSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ---LHSWIMKVGLESD 417

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S LI  Y K   L E+ +V  E+   ++V  N++ +     S   EAL LY+++  
Sbjct: 418 VFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRR 477

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                + ST + VL+AC +++ LE G+  H   LK  +DQD+ + +A++DMYCKCG++ED
Sbjct: 478 VGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLED 535

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AK  F ++ +  +  W+ M+ G AQ+G   E  NLF  M   G KP+ IT L VL +C H
Sbjct: 536 AKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSH 595

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV E   Y   M++L+G+ P  EHY C++DLLGR   L+     I +M   PD   W+
Sbjct: 596 AGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWR 655

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC    N+DL   A  ++L+L P +   YVLLSN+YA +  WNDV ++R+ MK++ 
Sbjct: 656 TLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRG 715

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + KEPG SWI V    H F  GD SH Q  EI ++L
Sbjct: 716 IRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQL 751



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 203/393 (51%), Gaps = 33/393 (8%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           A+ + D +  +G+  D+ T+S L+K C   G+++E + VH      G+  + +L +  I 
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y K   +  A++ F    + + V++T M+  Y      D++  +   M   G+  N F+
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
            ++VL A   + + +Q+H + +KVG  S V   + +A++++Y + G+ L+A+K+F E+  
Sbjct: 389 FSSVLRACERLYDLKQLHSWIMKVGLESDV--FVRSALIDVYSKMGELLEALKVFREMMT 446

Query: 242 PDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            D V W+  IAA     DG EA  L+K +R   F  ++ T+ ++L +     +L  G+  
Sbjct: 447 GDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGR-- 504

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
           QA  + + F + + + NAL+ MY KCG + DA+ IF+ +  KD +SW++MIAG ++NGF 
Sbjct: 505 QAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFS 564

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM---- 414
            +AL++F  M      PN  T+  +L A S           H+ ++  G+    SM    
Sbjct: 565 MEALNLFESMKVQGPKPNHITILGVLFACS-----------HAGLVNEGWYYFRSMNNLY 613

Query: 415 --------ISCLITTYGKCNALNESKRVLSEID 439
                     C++   G+   L++  +++ E++
Sbjct: 614 GIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMN 646



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 162/290 (55%), Gaps = 12/290 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +++  +  NG+H    L+  LI+ + KF     A + LFD    R+++++  +IS  +  
Sbjct: 306 RVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEA-QVLFDKMPERNVVSWTTMISAYSNA 364

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             +  A++L   +   G+ P+ FTFSS+++AC  L + + +H   +K+G  S V++ S  
Sbjct: 365 QLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSAL 424

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I+ Y+K GE++ A   FR+ +  D+V + +++  +  + + D++  ++  MR +G   ++
Sbjct: 425 IDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQ 484

Query: 180 FSLTAVLGA--SFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +LT+VL A  S  + E G Q H   +K  F   +   LNNA++++Y +CG   DA  +F
Sbjct: 485 STLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLI--LNNALLDMYCKCGSLEDAKFIF 540

Query: 237 DEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLL 283
           + + + DV+SWS  IA  A +G  +EA  LF+ ++    + N  T++ +L
Sbjct: 541 NRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVL 590



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 9/271 (3%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           ++++  +VH HI  +G+     + + LI  Y K N L E++ +  ++ ++N V    + S
Sbjct: 300 AVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMIS 359

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
               A  +  A+ L   ++      N  TFS VL+AC  + DL+Q   +H   +K   + 
Sbjct: 360 AYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ---LHSWIMKVGLES 416

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+FV SA+ID+Y K G + +A + FR++       WN+++  +AQH    E  +L+  M 
Sbjct: 417 DVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMR 476

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
           + G   D+ T  +VL +C    L+   R  ++  +     LI        ++D+  + G 
Sbjct: 477 RVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILN----NALLDMYCKCGS 532

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           LE AK   ++M    D   W ++++     G
Sbjct: 533 LEDAKFIFNRMA-KKDVISWSTMIAGLAQNG 562



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           R +W      +  T+S ++K C A   + +GK +H       Y    F+ + +I+MY K 
Sbjct: 279 RGVWA-----DSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKF 333

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
             +E+A+  F K+   ++  W  M+  Y+          L   M + GV P+  T+ +VL
Sbjct: 334 NLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVL 393

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG-LLEGAKMTIDQMPIPP 645
            +C     +++  +++  +    GL   +   + ++D+  ++G LLE  K+  + M    
Sbjct: 394 RACERLYDLKQLHSWIMKV----GLESDVFVRSALIDVYSKMGELLEALKVFREMM--TG 447

Query: 646 DAHIWQSLLSACTIYGNIDLGL 667
           D+ +W S+++A   + + D  L
Sbjct: 448 DSVVWNSIIAAFAQHSDGDEAL 469


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 211/663 (31%), Positives = 347/663 (52%), Gaps = 22/663 (3%)

Query: 77  LRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           L P    + SL+K   A  SL   + +H   +  G  S + + S  +  YA  G + +A 
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNAR 75

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE---LNEFSLTAVLGASF 190
             F +      + Y  M+  Y+  G++ ++ +VF+EM  LG +    + ++   V+ A  
Sbjct: 76  KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEM--LGSKDCCPDNYTYPFVIKACS 133

Query: 191 D---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           +   V+ G  +HG  +   F S +   + N+++ +Y+ CG+  +A K+FD + E  VVSW
Sbjct: 134 ELLLVEYGRVLHGLTLVSKFGSHL--FVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSW 191

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY- 303
           +  I           A  +F  +  +  +I+  +++++L + G  + L  G+++      
Sbjct: 192 NTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEE 251

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           KV   ++VS  NAL+ MY KCG +++AR +FD ++ +D VSW SMI GY  NG    AL 
Sbjct: 252 KVLGKKIVS--NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALS 309

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M    L PN  T+A IL A ++  +LK    +H  ++K     + ++ + LI  Y 
Sbjct: 310 LFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYA 369

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KCN L  S  V +   +K  V  NAL S  V+     EA+ L++ +     E+N +T + 
Sbjct: 370 KCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNS 429

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD- 542
           +L A   + DL+    I+   +++ +  +I V +++ID+Y KCG++E A + F  I  D 
Sbjct: 430 LLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDV 489

Query: 543 -SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             +  W+ ++ GY  HG      +LF +M + GVKP+++T+ +VL SC HAG+V +    
Sbjct: 490 QDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL 549

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M   H  IP  +HY C+VDLLGR G ++ A   I  MP  P   +W +LL AC ++ 
Sbjct: 550 FKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHE 609

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N++LG +A   L EL+P N   YVLL+ LYA+ G W D   +R+ M +  L K P +S I
Sbjct: 610 NVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669

Query: 722 HVG 724
             G
Sbjct: 670 EAG 672



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 221/440 (50%), Gaps = 17/440 (3%)

Query: 4   SLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG 63
           +L+ K G HL   +  +L++ +    +   A +     + + ++++N +I+G  +   + 
Sbjct: 148 TLVSKFGSHL--FVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFAN 205

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFI 120
            AL +F+++   G+  D  +  S++ ACG L+E E+   VHG+  +     ++ + +  +
Sbjct: 206 TALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALV 264

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + YAK G +  A + F + ++ D V++T+M+ GY+ NG+   +  +F  M+  GL  N  
Sbjct: 265 DMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSV 324

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++  +L A     ++K+G  +HG+ +K    S V   +  +++++Y +C     +  +F 
Sbjct: 325 TIALILLACASLNNLKDGRCLHGWVMKQRLYSEVA--VETSLIDMYAKCNCLGLSFSVFT 382

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
             +    V W+  ++         EA GLFK +     +IN  T  +LL + G    L+ 
Sbjct: 383 RTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQP 442

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI--FKDSVSWNSMIAGY 352
              I ++  + GF+  + +  +LI +Y KCG +  A  IF+ +    +D   W+ +IAGY
Sbjct: 443 VNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGY 502

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLD 411
             +G    A+ +F  M++  + PN  T  S+L++ S++  +   + +   ++K    + +
Sbjct: 503 GMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPN 562

Query: 412 DSMISCLITTYGKCNALNES 431
           D   +C++   G+   ++E+
Sbjct: 563 DDHYTCMVDLLGRAGRMDEA 582



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 162/341 (47%), Gaps = 24/341 (7%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           I+S  L+  + K      A R +FD    RD++++ ++I+G      +  AL LF  ++ 
Sbjct: 258 IVSNALVDMYAKCGSMDEA-RLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQI 316

Query: 75  QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +GLRP++ T + ++ AC S   L++   +HG  +K    S V + +  I+ YAK   +  
Sbjct: 317 EGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGL 376

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GA 188
           +   F        V + A++ G V N    ++  +F +M   G+E+N  +  ++L   G 
Sbjct: 377 SFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGI 436

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EPDVVS 246
             D++    I+ + ++ GF+S +   +  +++++Y +CG    A K+F+ I     D+  
Sbjct: 437 LADLQPVNNINSYLMRSGFVSNI--QVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFV 494

Query: 247 WSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  IA       G  A  LFK +  +  + N+ T  ++L S     ++  G     + +
Sbjct: 495 WSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDG----LYLF 550

Query: 304 KVGFMEVVSIGN-----ALISMYGKCGQVNDARSIFDYLIF 339
           K    +  +I N      ++ + G+ G++++A  +   + F
Sbjct: 551 KFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPF 591


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 181/550 (32%), Positives = 295/550 (53%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 44  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  + G+QI     K+G    + +  +LISMY + G++ DA  +FD             
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 223

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM +++ A + S S++   QVHS I   GF  +  +++ LI  Y KC  L  +  +   
Sbjct: 224 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEG 283

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 284 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 343

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +    + +++IDMY KCG IE A + F  I   SL+ WNAM+ G+
Sbjct: 344 RWIHVYIDKRLKGVANAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 402

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG      ++F++M K G++PD+IT++ +L++C H+G++   R     M+  + + P+
Sbjct: 403 AMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPK 462

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC ++GN++LG      L+
Sbjct: 463 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLI 522

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P+N  +YVLLSN+YA+AG WN+V   R  + +K + K PG S I +    H F  GD
Sbjct: 523 KIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 582

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 583 KFHPRNREIY 592



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 242/545 (44%), Gaps = 84/545 (15%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  ++   ++S    F     A       Q  +++ +N +  G 
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILS--PHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       ALKL+  +   GL P+++TF  L+K+C    + +E + +HG  LKLG    +
Sbjct: 67  ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           Y+ +  I  Y ++G +  A   F +    D V+YTA++ GY                   
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G + ++ E+F +M    +  +E ++  V+ A   S  ++ G Q+H
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF S +   + NA+++LY +CG+   A  +F+ +   DV+SW+  I        
Sbjct: 247 SWIDDHGFGSNL--KIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNL 304

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K   G     S+ 
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A  +F+ ++ K   SWN+MI G++ +G  + + D+F  M +  + 
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P+  T   +L A S+S  L     +  HI +S  +  D  ++  +  YG           
Sbjct: 425 PDDITFVGLLSACSHSGML----DLGRHIFRS--MTQDYKMTPKLEHYG----------- 467

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
                         +  +L ++    EA E+  T+     E +G  +  +LKAC    ++
Sbjct: 468 -------------CMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNV 511

Query: 495 EQGKA 499
           E G++
Sbjct: 512 ELGES 516



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 241/558 (43%), Gaps = 93/558 (16%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDLDNVAYTAM 150
           LQ   ++H   +K G  +  Y +S  IE    S     +  A   F    + + + +  M
Sbjct: 3   LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGF 207
             G+  + +   + +++V M SLGL  N ++   +L +   S   KEG+QIHG  +K+G 
Sbjct: 63  FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG- 121

Query: 208 LSGVCN---HLNNAIMNLYVRCGQKLDA-------------------------------V 233
               C+   +++ +++++YV+ G+  DA                                
Sbjct: 122 ----CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQ 177

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           KMFDEI   DVVSW+  I+   +     EA  LFKD+   + + +E TM+ ++S+     
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 237

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  G+Q+ ++    GF   + I NALI +Y KCG++  A  +F+ L +KD +SWN++I 
Sbjct: 238 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIG 297

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK--SGF 408
           GY+    + +AL +F  ML     PN  TM SIL A ++  ++     +H +I K   G 
Sbjct: 298 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 357

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
               S+ + LI  Y KC  +  + +V + I  K+    NA+            + +++  
Sbjct: 358 ANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSR 417

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +  +  E +  TF  +L AC+    L+ G+ I                            
Sbjct: 418 MRKNGIEPDDITFVGLLSACSHSGMLDLGRHI---------------------------- 449

Query: 529 IEDAKRAFRKICRD-----SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
                  FR + +D      L  +  M+      G + E   + N M    ++PD + + 
Sbjct: 450 -------FRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWC 499

Query: 584 AVLTSCCHAGLVREARTY 601
           ++L +C   G V    ++
Sbjct: 500 SLLKACKMHGNVELGESF 517



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 195/447 (43%), Gaps = 58/447 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  ++K G  LD  + T+LIS + +      A +   ++ +RD+++Y ALI G A   
Sbjct: 112 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRG 171

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF  +    +RPD  T  ++V 
Sbjct: 172 YIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 231

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC   GS++    VH      GF S + +V+  I+ Y+K GE+ +A   F      D ++
Sbjct: 232 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVIS 291

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
           +  ++ GY     + ++  +F EM   G   N+ ++ ++L A     + D+  G  IH +
Sbjct: 292 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI--GRWIHVY 349

Query: 202 GVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
             K   L GV N   L  +++++Y +CG    A ++F+ I    + SW+  I   A    
Sbjct: 350 IDKR--LKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 407

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGN 315
              +F +F  +R N  + ++ T + LLS+     +L  G+ I ++          +    
Sbjct: 408 ADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYG 467

Query: 316 ALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE---- 370
            +I + G  G   +A  + + + +  D V W S++     +G          ++++    
Sbjct: 468 CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPE 527

Query: 371 ----FSLIPNGYTMASILEAVSNSKSL 393
               + L+ N Y  A     V+N+++L
Sbjct: 528 NPGSYVLLSNIYATAGRWNEVANTRAL 554


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 184/525 (35%), Positives = 279/525 (53%), Gaps = 6/525 (1%)

Query: 239 ITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + + ++VSW+  I+         EA   F  +R       ++   + + +      +  G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           KQ+     K G    + +G+ L  MY KCG + DA  +F+ +  KD VSW +MI GYS+ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G F +AL  F  M++  +  + + + S L A    K+ K    VHS ++K GF  D  + 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 416 SCLITTYGKCNALNESKRVLSEIDK--KNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + L   Y K   +  +  V   ID   +N V    L    V      + L ++  +    
Sbjct: 181 NALTDMYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            E N  TFS ++KACA    LEQG  +H   +K  +D+D FV S ++DMY KCG +E A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           +AF +I   +   WN+++  + QHG   +   +F +M   GVKP+ IT++++LT C HAG
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV E   Y   M   +G++P  EHY+C++DLLGR G L+ AK  I++MP  P+A  W S 
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L AC I+G+ ++G LA  KL++L+P N    VLLSN+YA+   W DV  +R  M++  + 
Sbjct: 420 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           K PGYSW+ VG  TH F A D SH +   IY++L  L + + A  
Sbjct: 480 KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 524



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 210/407 (51%), Gaps = 13/407 (3%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
            R+++++ A+ISGL++  +   A++ F  +R  G  P  F FSS ++AC   GS++  + 
Sbjct: 3   QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H + LK G  S +++ S   + Y+K G +  A   F +    D V++TAM+ GY   GE
Sbjct: 63  MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
           F+++   F +M    + +++  L + LGA   +K    G  +H   VK+GF S +   + 
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI--FVG 180

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAAACDGVE---AFGLFKDLRFNDF 272
           NA+ ++Y + G    A  +F   +E  +VVS++  I    +  +      +F +LR    
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + NE+T  +L+ +   +  L  G Q+ A   K+ F E   + + L+ MYGKCG +  A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
            FD +     ++WNS+++ + ++G    A+ +F  M++  + PN  T  S+L   S++  
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 393 LKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           +++ +     + K+ G +  +   SC+I   G+   L E+K  ++ +
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 407



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 184/367 (50%), Gaps = 24/367 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L +K G   +  + + L   ++K      A +   +   +D +++ A+I G ++  
Sbjct: 62  QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 121

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +   AL  F ++  + +  D     S + ACG+L+       VH   +KLGF S +++ +
Sbjct: 122 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 181

Query: 118 GFIENYAKSGEIVSAEMCF---RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
              + Y+K+G++ SA   F    +C ++  V+YT ++ GYV   + +K   VFVE+R  G
Sbjct: 182 ALTDMYSKAGDMESASNVFGIDSECRNV--VSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E NEF+ ++++ A  +   +++G Q+H   +K+ F       +++ ++++Y +CG    
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED--PFVSSILVDMYGKCGLLEQ 297

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A++ FDEI +P  ++W+  ++       G +A  +F+ +     + N  T I+LL+    
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIG----NALISMYGKCGQVNDARSIFDYLIFK-DSV 343
             ++  G     + Y +     V  G    + +I + G+ G++ +A+   + + F+ ++ 
Sbjct: 358 AGLVEEGLD---YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414

Query: 344 SWNSMIA 350
            W S + 
Sbjct: 415 GWCSFLG 421



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNRDIITYNALISGLARFC 60
           ++S ++K G   D  +   L   ++K  D   A   F  D++ R++++Y  LI G     
Sbjct: 164 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 223

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q    L +F  LR QG+ P+ FTFSSL+KAC    +L++   +H   +K+ F    ++ S
Sbjct: 224 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 283

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G +  A   F +  D   +A+ ++V  +  +G    + ++F  M   G++ 
Sbjct: 284 ILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKP 343

Query: 178 NEFSLTAVL-GASFD--VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N  +  ++L G S    V+EG +  +      G + G  ++  + +++L  R G+  +A 
Sbjct: 344 NAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY--SCVIDLLGRAGRLKEAK 401

Query: 234 KMFDEIT-EPDVVSWSERIAA 253
           +  + +  EP+   W   + A
Sbjct: 402 EFINRMPFEPNAFGWCSFLGA 422


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 203/710 (28%), Positives = 359/710 (50%), Gaps = 25/710 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
            ++ L + +G      +  +LIS + K +      R +F   +R  +I+++A I   A +
Sbjct: 233 HVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFI---AAY 289

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            Q   A+K F+ +  +G++P+A T +S+++AC   G+ ++   +H + L   ++    ++
Sbjct: 290 GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVL 349

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +     YAK   +  A   F      D V++ A+V  Y   G F  +  +  +M+  G  
Sbjct: 350 NAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFV 409

Query: 177 LNEFSLTAVL------------GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            ++ +   +L            G S  + +G Q+H   +  G L G   +L N ++ +Y 
Sbjct: 410 PDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNG-LDGD-TYLGNLLVQMYG 467

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMIN 281
           RCG   DA   F  I + +V SW+  I+      EA     L K +     + N+ T I+
Sbjct: 468 RCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFIS 527

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           LL +      L  GK I       G    +   NAL++MY  C  +++AR +F+ ++F+D
Sbjct: 528 LLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRD 587

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSW  +I+ Y+  G+  +AL ++  M +    P+  T+ S+LEA ++ ++L +   +H 
Sbjct: 588 VVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHE 647

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            I+ SG   D  + + +++ YGKC A+ ++++V   I  K+ V  NA+        C  +
Sbjct: 648 RIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEK 707

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           A  LY  +  +    N  T   +L +C++   +E+G ++H  A    Y     V +A+I+
Sbjct: 708 AFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALIN 767

Query: 522 MYCK-CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           MY K CG +E A+ AF  +   ++  W++++  YA++G      NLF  M++ GV P+ +
Sbjct: 768 MYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIV 827

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+ +VL +C HAGL  E  +Y   M   H L P  EHY C+V+LL + G ++ A   +  
Sbjct: 828 TFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSA 887

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           MP+ PDA  W+SLL AC ++ + + G LA  +LL+ +P N + YVLL N+
Sbjct: 888 MPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 937



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 177/672 (26%), Positives = 322/672 (47%), Gaps = 20/672 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ ++ +G     +LS +L+  + K      A         RD+I++NA+I+  A+  
Sbjct: 31  QIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHE 90

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A++L+   R +G +PD  TF+SL+ AC   G L+   ++H   L   F S   + +
Sbjct: 91  CGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCN 150

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I  Y+  G +  A   F      D   +T ++  Y  +G+ + +   + +M   GL  
Sbjct: 151 GLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRS 210

Query: 178 NEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AV 233
           NE +   VL   +S +V E G+ +H   +  G    +   + N+++++Y +C +  D A 
Sbjct: 211 NEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSL--RMENSLISMYGKCSRHPDEAR 268

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           ++F  I+ P V+SWS  IAA     EA   F+ +     + N  T+ ++L +        
Sbjct: 269 EVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHE 328

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G++I A      + +  ++ NA  S+Y KC +V DA  +F  +  KD+VSWN++++ Y+
Sbjct: 329 QGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYA 388

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS---------NSKSLKQAMQVHSHII 404
           + G F  A+ +   M     +P+  T  +IL + S         NSKSL    QVHS +I
Sbjct: 389 KQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMI 448

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
            +G   D  + + L+  YG+C +L++++     I ++N      L S+LV     +E LE
Sbjct: 449 SNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLE 508

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L +++     E N  TF  +L AC+   DL  GK IH        + DI   +A+++MY 
Sbjct: 509 LLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYT 568

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
            C ++++A+  F ++    +  W  ++  YA  G   E   L+ +M +   +PD +T ++
Sbjct: 569 TCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLIS 628

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           VL +C     + E +     +    G+   +     +V   G+   +E A+   D++ + 
Sbjct: 629 VLEACASLRALVEGKAIHERIV-ASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRI-LD 686

Query: 645 PDAHIWQSLLSA 656
            D   W +++ A
Sbjct: 687 KDIVCWNAMIGA 698



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 216/426 (50%), Gaps = 14/426 (3%)

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           LN  S  A LG S    +G+QIH   +  G  + V   L+N+++ +Y +CG   +A   F
Sbjct: 14  LNAVSACAALGDSL---QGKQIHARILSSGLGASVL--LSNSLVYMYGKCGSVEEARNAF 68

Query: 237 DEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D + E D++SW+  I        G +A  L+   R    + +E T  +LL++      L+
Sbjct: 69  DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLK 128

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+ +        F+    + N LISMY  CG ++DA ++F++    D  +W ++IA Y+
Sbjct: 129 FGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYT 188

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +G    A   +  M +  L  N  T  ++L+  S+ + L+    VH   + SG      
Sbjct: 189 RHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLR 248

Query: 414 MISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           M + LI+ YGKC+   +E++ V   I + + +  +A   +  Y   H EA++ +  +   
Sbjct: 249 MENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAF--IAAYGQ-HWEAIKTFELMNLE 305

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + N +T + VL+ACA +   EQG+ IH L L   Y Q+  V +A   +Y KC  + DA
Sbjct: 306 GVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADA 365

Query: 533 KRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
            R F  I C+D+++ WNA++  YA+ G + +   L  +M   G  PD+IT++ +L SC  
Sbjct: 366 SRVFSSIPCKDAVS-WNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQ 424

Query: 592 AGLVRE 597
           + L+++
Sbjct: 425 SALLKQ 430



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 258/540 (47%), Gaps = 28/540 (5%)

Query: 75  QGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +G+  D  T  + V AC +L ++   + +H   L  G  + V L +  +  Y K G +  
Sbjct: 4   EGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEE 63

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF- 190
           A   F    + D +++ AM+  Y  +    ++ +++   R  G + +E +  ++L A F 
Sbjct: 64  ARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFA 123

Query: 191 --DVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             D+K G  +H   +   F+S   VCN L    +++Y  CG   DA  +F+    PDV +
Sbjct: 124 SGDLKFGRMLHEHFLGTSFVSDQIVCNGL----ISMYSDCGSLDDATAVFEWSFRPDVCT 179

Query: 247 WSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  IAA     +   AF  +  +     + NE T + +L +     +L  GK +     
Sbjct: 180 WTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLAL 239

Query: 304 KVGFMEVVSIGNALISMYGKCGQ-VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
             G    + + N+LISMYGKC +  ++AR +F  +     +SW++ IA Y ++    +A+
Sbjct: 240 GSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAI 296

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
             F  M    + PN  T+ S+L A +   + +Q  ++H+ ++   +  + ++++   + Y
Sbjct: 297 KTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLY 356

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC+ + ++ RV S I  K+AV  NA+ S         +A+ L R +       +  TF 
Sbjct: 357 AKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFI 416

Query: 483 IVLKACAAMTDLEQ---------GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            +L +C+    L+Q         G+ +H   +    D D ++ + ++ MY +CG+++DA+
Sbjct: 417 TILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDAR 476

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            AF+ I + ++  W  ++    Q+G   E   L   M   G + ++IT++++L +C   G
Sbjct: 477 AAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTG 536



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 186/393 (47%), Gaps = 26/393 (6%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +E T++N +S+         GKQI A     G    V + N+L+ MYGKCG V +AR+ F
Sbjct: 9   DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           D +  +D +SWN+MI  Y+++    QA+ ++ +       P+  T AS+L A   S  LK
Sbjct: 69  DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLK 128

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
               +H H + + F+ D  + + LI+ Y  C +L+++  V     + +   +    +V+ 
Sbjct: 129 FGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPD---VCTWTTVIA 185

Query: 455 YASCHAEALELYRTIWGSCRE----VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
             + H + LE     W    +     N  TF  VL  C+++  LE GK +H LAL +  D
Sbjct: 186 AYTRHGK-LECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLD 244

Query: 511 QDIFVESAVIDMYCKCGTIED-AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             + +E+++I MY KC    D A+  F +I R S+  W+A +  Y QH    E    F  
Sbjct: 245 FSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH---WEAIKTFEL 301

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI---PQLEHYACI---VD 623
           M+  GVKP+  T  +VL +C   G   + R        +H L+   P  ++   +     
Sbjct: 302 MNLEGVKPNATTLTSVLRACATVGAHEQGRR-------IHALVLAGPYTQNTTVLNAAAS 354

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           L  +   +  A      +P   DA  W +++SA
Sbjct: 355 LYAKCSRVADASRVFSSIPC-KDAVSWNAIVSA 386


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 191/627 (30%), Positives = 318/627 (50%), Gaps = 6/627 (0%)

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASF 190
           A   F      D   +  +V G+  N     S  ++  +R +  L  + F+    + A  
Sbjct: 63  ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           + K    +H   +  G+ S V   + +A+++LY +  + + A K+FD + E D V W+  
Sbjct: 123 NDKHLMLLHAHSIIDGYGSNV--FVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTM 180

Query: 251 I---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I      C   ++  LF+++  +  +++  T+  +L +    + L+ G  IQ    K+GF
Sbjct: 181 INGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGF 240

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +   LIS+Y KCG VN AR +F  +   D +++N+MI+G++ NG    ++ +F  
Sbjct: 241 GFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRE 300

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           +L      +  T+  ++   S    L  A  +H   +KSG +L+ ++ +     Y K N 
Sbjct: 301 LLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNE 360

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           ++ ++ +  E  +K  V  NA+ S          A+ L++ +  +    N  T + +L A
Sbjct: 361 IDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSA 420

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA +  L  GK +H L      + +I+V +A++DMY KCG I +A + F  +   +   W
Sbjct: 421 CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW 480

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N M+ GY  HG  HE   L+N+M   G  P  +T+L+VL +C HAGLV E       M +
Sbjct: 481 NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVN 540

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            + + P +EHYAC+VD+LGR G LE A   I +MP+ P   +W +LL AC I+ + D+  
Sbjct: 541 KYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIAR 600

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
           LA  +L EL P +   YVLLSN+Y+    +     +R+ +K++ L K PG + I V G  
Sbjct: 601 LASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTP 660

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
           H F +GD SHS + +IY +L KL   M
Sbjct: 661 HVFVSGDRSHSHATDIYAKLEKLTGKM 687



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 273/561 (48%), Gaps = 13/561 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++  I NG+  D    T L      F+  R A    F     DI  +N L+ G +   
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
               ++ L+  LR    L PD FT++  V AC + +   ++H   +  G+ S V++ S  
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSAL 149

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ Y K   +V A   F    + D V +  M+ G V N  FD S ++F EM + G+ ++ 
Sbjct: 150 VDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDS 209

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++TAVL A+ +++E   G  I    +K+GF  G C+++   +++LY +CG    A  +F
Sbjct: 210 STVTAVLPAAAELQELKVGMGIQCLALKIGF--GFCDYVLTGLISLYSKCGDVNTARLLF 267

Query: 237 DEITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             I  PD+++++  I+   A  G E +  LF++L F+  +++  T++ L+        L 
Sbjct: 268 RRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLH 327

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
               I  FC K G +   ++  A  ++Y K  +++ AR +FD    K  V+WN+MI+GY+
Sbjct: 328 LACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYT 387

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG    A+ +F  M++    PN  T+ +IL A +   SL     VH H+IKS  L  + 
Sbjct: 388 QNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNI 446

Query: 414 MIS-CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            +S  L+  Y KC  ++E+ ++   + +KN V  N +           EAL+LY  +   
Sbjct: 447 YVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHL 506

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAI-HCLALKARYDQDIFVESAVIDMYCKCGTIED 531
               +  TF  VL AC+    + +G+ I H +  K R +  I   + ++D+  + G +E 
Sbjct: 507 GYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEK 566

Query: 532 AKRAFRKI-CRDSLAGWNAMM 551
           A    +K+      A W  ++
Sbjct: 567 ALEFIKKMPVEPGPAVWGTLL 587


>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 176/494 (35%), Positives = 279/494 (56%), Gaps = 4/494 (0%)

Query: 252 AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
           A++C    AF ++  +  N F  + YT   +L +      ++ G+Q+     K+GF+  +
Sbjct: 81  ASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDL 140

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + N+L+  Y  CG+   A  +FD ++ +D VSW  +I+GY   G F++A+++F   L+ 
Sbjct: 141 YVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLF---LKM 197

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            ++PN  T  S+L A      L     VH  + K  F +   + + L+  Y KC  L E+
Sbjct: 198 DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEA 257

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           +++  E+  ++ V   ++ S LV      ++LEL+  +  S  E +    + VL ACA++
Sbjct: 258 RKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASL 317

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             L+ G+ +     +   + DI + +A++DMY KCG IE A   F  I   ++  WNA++
Sbjct: 318 GALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALL 377

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM-SDLHG 610
            G A HG  HE    F  M   G++P+E+T+LA+LT+CCH+GLV E R+Y   M S    
Sbjct: 378 GGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFN 437

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
             P+LEHY C++DLL R GLL+ A   I  MP+PPD  IW +LLSAC   GN++L     
Sbjct: 438 FSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEIL 497

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
           S LLEL+  +   YVLLSN+YA+   W+DV ++R+ MK+K + K PG S I V G  H F
Sbjct: 498 SHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHEF 557

Query: 731 YAGDSSHSQSKEIY 744
             GD++HS++++I+
Sbjct: 558 LVGDTNHSRNEDIH 571



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 257/556 (46%), Gaps = 56/556 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQ-NRDIITYNALISGL 56
           QI++ LI +G   D  + + +   F K   F D+  AF FL  T  +   + YN LI+  
Sbjct: 23  QIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDY--AFDFLNQTDLHVGTLPYNTLIAAY 80

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A  C    A  ++ R+   G  PD +TF  ++KAC     +QE E VHGV +K+GF   +
Sbjct: 81  ASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDL 140

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           Y+ +  +  Y+  G+   A   F + L  D V++T ++ GYV  G FD++  +F++M  +
Sbjct: 141 YVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVV 200

Query: 174 GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
                  S+    G    +  G+ +HG   K  F  G+   + NA++++YV+C    +A 
Sbjct: 201 PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLV--VGNALVDMYVKCECLCEAR 258

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FDE+ + D+VSW+  I+         ++  LF D++ +  + +   + ++LS+     
Sbjct: 259 KLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLG 318

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+ +Q +  + G    + IG AL+ MY KCG +  A  IF+ +  ++  +WN+++ 
Sbjct: 319 ALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLG 378

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G + +G  ++AL  F  M+   + PN  T  +IL A  +S  + +       +I   F  
Sbjct: 379 GLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNF 438

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              +    C+I    +   L+E+ + +  +     V                        
Sbjct: 439 SPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDV-----------------------L 475

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKC 526
           IWG+           +L AC A  ++E  + I  H L LK+   QD  V   + ++Y   
Sbjct: 476 IWGA-----------LLSACKANGNVELSQEILSHLLELKS---QDSGVYVLLSNIYATN 521

Query: 527 GTIEDAKRAFRKICRD 542
              +D  R  R++ +D
Sbjct: 522 ERWDDVTRV-RRLMKD 536



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 15/392 (3%)

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +  + LL+S+   + +R+ KQI A     G +    + + +   +GK   +      FD+
Sbjct: 3   FLKLRLLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGK--HIGFVDYAFDF 60

Query: 337 LIFKD----SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           L   D    ++ +N++IA Y+ +     A  ++  ++    +P+ YT   +L+A +    
Sbjct: 61  LNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLG 120

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           +++  QVH   +K GFL D  + + L+  Y  C     + RV  E+  ++ V    L S 
Sbjct: 121 VQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISG 180

Query: 453 LVYASCHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
            V      EA+ L+  +     +V  N +TF  VL AC  M  L  GK +H L  K  + 
Sbjct: 181 YVRTGLFDEAINLFLKM-----DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFG 235

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
             + V +A++DMY KC  + +A++ F ++    +  W +++ G  Q     +   LF  M
Sbjct: 236 IGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDM 295

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              GV+PD I   +VL++C   G +   R ++    +  G+   +     +VD+  + G 
Sbjct: 296 QISGVEPDRIILTSVLSACASLGALDYGR-WVQEYIERQGIEWDIHIGTALVDMYAKCGC 354

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           +E A    + +P   +   W +LL    ++G+
Sbjct: 355 IEMALHIFNGIP-NRNIFTWNALLGGLAMHGH 385



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 168/362 (46%), Gaps = 31/362 (8%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK-CNALNESKRVLSEID-K 440
           +L ++   K+++   Q+H+H+I SG L D+ ++S +   +GK    ++ +   L++ D  
Sbjct: 8   LLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLH 67

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
              +  N L +    +     A  +Y  I G+    +  TF +VLKAC     +++G+ +
Sbjct: 68  VGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQV 127

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H +A+K  +  D++V+++++  Y  CG    A R F ++    +  W  ++ GY + G +
Sbjct: 128 HGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLF 187

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ------ 614
            E  NLF KM    V P+  T+++VL +C   G       YLS    +HGL+ +      
Sbjct: 188 DEAINLFLKMD---VVPNVATFVSVLVACGRMG-------YLSMGKGVHGLVYKRAFGIG 237

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT--IYGNIDLGLLAGSK 672
           L     +VD+  +   L  A+   D++P   D   W S++S           L L    +
Sbjct: 238 LVVGNALVDMYVKCECLCEARKLFDELP-DRDIVSWTSIISGLVQCKQPKDSLELFYDMQ 296

Query: 673 LLELQPDNESTYVLLSNLYASAGMWN-DVGKLRKEMKEKFLCKEPGYSW-IHVGGYTHHF 730
           +  ++PD     +L S L A A +   D G+  +E  E+      G  W IH+G      
Sbjct: 297 ISGVEPDR---IILTSVLSACASLGALDYGRWVQEYIER-----QGIEWDIHIGTALVDM 348

Query: 731 YA 732
           YA
Sbjct: 349 YA 350


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/577 (32%), Positives = 308/577 (53%), Gaps = 17/577 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
            + +HG  VK G +  +   +  +++N+Y+RCG   DA  +FDE+ E +VV+W+  I   
Sbjct: 97  AKALHGHMVKTGTIVDI--FVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGY 154

Query: 254 --ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                 V A  +F ++       ++YT+  +LS+      +  GKQ+  +  K G   + 
Sbjct: 155 TLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASIT 214

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ-ALDMFCHMLE 370
           SIGN+L  +Y K G +      F  +  K+ ++W +MI+  +E+  + +  L++F  ML+
Sbjct: 215 SIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLK 274

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             ++PN +T+ S++     S  +    QV     K G   +  + +  +  Y +     E
Sbjct: 275 GEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEE 334

Query: 431 SKRVLSEIDKKNAVHINAL----ASVLVYAS--CHA-----EALELYRTIWGSCREVNGS 479
           + R+  E++  + +  NA+    A ++  A    HA     +AL+++R +  S  + +  
Sbjct: 335 AMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLF 394

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           TFS +L  C+ M  LEQG+ IH   +K  +  D+ V SA+++MY KCG IE A +AF ++
Sbjct: 395 TFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEM 454

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
              +L  W +M+ GY+QHG  H+   LF  M   G KP+EIT++++L++C +AGLV EA 
Sbjct: 455 PTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAM 514

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            Y   M + + + P ++HY C++D+  R+G L+ A   I +    P+  IW SL++ C  
Sbjct: 515 RYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRS 574

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
           +GN++L   A  +LLEL+P    TYVLL N+Y S G W DV ++RK  K + L      S
Sbjct: 575 HGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRS 634

Query: 720 WIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           WI +    + F A D SH QS E+Y+ L  L E   A
Sbjct: 635 WITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKA 671



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 246/491 (50%), Gaps = 30/491 (6%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           GSL   + +HG  +K G    +++ +  +  Y + G    A   F +  + + V +TA++
Sbjct: 92  GSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALI 151

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFL 208
            GY  N +   + EVFVEM  LG   ++++L  +L    AS ++  G+Q+HG+ +K G  
Sbjct: 152 TGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAA 211

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE----AFGLF 264
           S     + N++  LY + G     ++ F  I + +V++W+  I+A  +          LF
Sbjct: 212 S--ITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLF 269

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
            D+   +   NE+T+ +++S  G    +  GKQ+Q FC+K+G    + + N+ + +Y + 
Sbjct: 270 LDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRK 329

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSE-------------NGFFNQALDMFCHMLEF 371
           G+  +A  +F+ +     ++WN+MI+G+++              GF  QAL +F  ++  
Sbjct: 330 GETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGF--QALKIFRDLVRS 387

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           ++ P+ +T +SIL   S   +L+Q  Q+H+  IK+GFL D  + S L+  Y KC  +  +
Sbjct: 388 AMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYA 447

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +   E+  +  V   ++ S         +A++L+  +  +  + N  TF  +L AC+  
Sbjct: 448 TKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYA 507

Query: 492 TDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAF--RKICRDSLAGW 547
             +E+      + ++  Y  +  ++    +IDM+ + G ++DA  AF  RK    + A W
Sbjct: 508 GLVEEAMRYFDM-MQNEYHIEPLMDHYGCMIDMFVRLGRLDDA-YAFIKRKGFEPNEAIW 565

Query: 548 NAMMMGYAQHG 558
           ++++ G   HG
Sbjct: 566 SSLVAGCRSHG 576



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 213/414 (51%), Gaps = 23/414 (5%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           ++K G  +D  ++T+L++ + +  + + A     +   ++++T+ ALI+G     Q   A
Sbjct: 104 MVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLA 163

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIEN 122
           L++F  +   G  P  +T   ++ AC +    ++   VHG  +K G +S   + +     
Sbjct: 164 LEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRL 223

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK-SKEVFVEMRSLGLELNEFS 181
           Y KSG + S    F+   D + + +T M+     +  + +    +F++M    +  NEF+
Sbjct: 224 YTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFT 283

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           LT+V+   G S D+  G+Q+ GF  K+G  + +   + N+ M LY+R G+  +A+++F+E
Sbjct: 284 LTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNL--PVKNSTMYLYLRKGETEEAMRLFEE 341

Query: 239 ITEPDVVSWSERIA--------------AACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
           + +  V++W+  I+              A   G +A  +F+DL  +  + + +T  ++LS
Sbjct: 342 MEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILS 401

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
                  L  G+QI A   K GF+  V + +AL++MY KCG +  A   F  +  +  V+
Sbjct: 402 VCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVT 461

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           W SMI+GYS++G  + A+ +F  M+     PN  T  S+L A S +  +++AM+
Sbjct: 462 WTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR 515



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 194/439 (44%), Gaps = 27/439 (6%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   K +     K G +  + +  +L+++Y +CG   DAR++FD +  K+ V+W ++I G
Sbjct: 94  LGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITG 153

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ N     AL++F  ML+    P+ YT+  +L A   S ++    QVH + IK G    
Sbjct: 154 YTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASI 213

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE-ALELYRTIW 470
            S+ + L   Y K   L    R    I  KN +    + S       + E  L L+  + 
Sbjct: 214 TSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDML 273

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N  T + V+  C    D+  GK +     K     ++ V+++ + +Y + G  E
Sbjct: 274 KGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETE 333

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQ---------HGCYH--EVSNLFNKMSKFGVKPDE 579
           +A R F ++  +S+  WNAM+ G+AQ         H      +   +F  + +  +KPD 
Sbjct: 334 EAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDL 393

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+ ++L S C   +  E    +   +   G +  +   + +V++  + G +E A     
Sbjct: 394 FTFSSIL-SVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFV 452

Query: 640 QMPIPPDAHIWQSLLSACTIYGN-------IDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
           +MP       W S++S  + +G         +  +LAG+K       NE T+V L +  +
Sbjct: 453 EMPTRTLV-TWTSMISGYSQHGRPHDAIQLFEDMILAGAK------PNEITFVSLLSACS 505

Query: 693 SAGMWNDVGKLRKEMKEKF 711
            AG+  +  +    M+ ++
Sbjct: 506 YAGLVEEAMRYFDMMQNEY 524



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 187/399 (46%), Gaps = 35/399 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           Q++   IK G      +  +L   +TK  +     R      ++++IT+  +IS  A   
Sbjct: 200 QVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDE 259

Query: 59  -FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG-SLQEN--EIVHGVCLKLGFSSRVY 114
            + + G  L LF  +    + P+ FT +S++  CG SL  N  + V G C K+G ++ + 
Sbjct: 260 NYTELG--LNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLP 317

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY--VWNGEFD---------KS 163
           + +  +  Y + GE   A   F +  D   + + AM+ G+  + +   D         ++
Sbjct: 318 VKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQA 377

Query: 164 KEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            ++F ++    ++ + F+ +++L        +++GEQIH   +K GFLS V   +N+A++
Sbjct: 378 LKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVV--VNSALV 435

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEY 277
           N+Y +CG    A K F E+    +V+W+  I+         +A  LF+D+     + NE 
Sbjct: 436 NMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEI 495

Query: 278 TMINLLS--SVGG--ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           T ++LLS  S  G  E  +R    +Q   +    M+       +I M+ + G+++DA + 
Sbjct: 496 TFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHY---GCMIDMFVRLGRLDDAYAF 552

Query: 334 FDYLIFKDSVS-WNSMIAGYSENGFFNQALDMFCHMLEF 371
                F+ + + W+S++AG   +G    A      +LE 
Sbjct: 553 IKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLEL 591



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 1/199 (0%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           SL  A  +H H++K+G ++D  + + L+  Y +C    +++ +  E+ +KN V   AL +
Sbjct: 93  SLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALIT 152

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                S    ALE++  +    R  +  T   +L AC A  +++ GK +H   +K     
Sbjct: 153 GYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAAS 212

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS-NLFNKM 570
              + +++  +Y K G +E   RAF++I   ++  W  M+   A+   Y E+  NLF  M
Sbjct: 213 ITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDM 272

Query: 571 SKFGVKPDEITYLAVLTSC 589
            K  V P+E T  +V++ C
Sbjct: 273 LKGEVMPNEFTLTSVMSLC 291



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 23/205 (11%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           + V  + +  +L  C     L   KA+H   +K     DIFV ++++++Y +CG  +DA+
Sbjct: 74  QSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDAR 133

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F ++   ++  W A++ GY  +        +F +M K G  P + T   +L++C    
Sbjct: 134 NLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACV--- 190

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLG--------RVGLLEGAKMTIDQMPIPP 645
               A   +     +HG    +++ A  +  +G        + G LE       ++   P
Sbjct: 191 ----ASHNIDLGKQVHGYT--IKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRI---P 241

Query: 646 DAHI--WQSLLSACTIYGN-IDLGL 667
           D ++  W +++SAC    N  +LGL
Sbjct: 242 DKNVITWTTMISACAEDENYTELGL 266


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 181/644 (28%), Positives = 346/644 (53%), Gaps = 13/644 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  + K G++  A   F   ++   V++T ++ GY+ + +  ++  ++ +MR  G+E + 
Sbjct: 81  ISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDY 140

Query: 180 FSLTAVLGASFDVKEGE---QIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVK 234
            +L  +L    +++      QIH   +K+G+     VCN L +A    Y +      A +
Sbjct: 141 VTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDA----YCKTHCLYLASQ 196

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   D V+++  +   + +G+  EA  LF +L  +  + +++T   LLS+  G   
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            + G+Q+  F  K  F+  V +GNAL+  Y K  QV++   +F  +   D +S+N +I  
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITS 316

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ NG F ++ D+F  +         +  A++L   ++S +L+   Q+H   I  G   +
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE 376

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y KCN   E++++   I  K+ V   A+ S  V    H E + ++  +  
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +    + +TF+ +L+ACA +  +  G+ +H L +++ +  +++  SA++D Y KCG + D
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A ++F ++   +   WNA++  YAQ+G      N F +M + G KPD +++L+VL++C H
Sbjct: 497 AIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G V EA  + + M+ ++ + P+ EHY  +VD+L R G  + A+  + +MP  P   +W 
Sbjct: 557 CGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWS 616

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           S+L++C I+ N +L   A  +L  ++   + + Y+ +SN+YA AG W++V K++K M+++
Sbjct: 617 SVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDR 676

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + K P YSW+ +   TH F A D SH + K+I +++  L + M
Sbjct: 677 GVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEM 720



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 214/406 (52%), Gaps = 11/406 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK G+  + ++  +L+  + K      A +      N+D +T+N+L++G +   
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEG 220

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
            +  A++LF  L   G++P  FTF++L+ A   L + +    VHG  LK  F   V++ +
Sbjct: 221 LNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGN 280

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K  ++      F +  +LD ++Y  ++  Y WNG+F +S ++F +++    + 
Sbjct: 281 ALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDR 340

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +F   +L ++  +S +++ G QIH   + VG  +   + + NA++++Y +C    +A K
Sbjct: 341 RQFPFATLLSIATSSLNLRMGRQIHCQAITVG--ANFESRVENALVDMYAKCNGDKEAQK 398

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD I     V W+  I+A        E   +F D+R      ++ T  ++L +      
Sbjct: 399 IFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLAS 458

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ +   + GFM  V  G+AL+  Y KCG + DA   F  +  ++SVSWN++I+ 
Sbjct: 459 ISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISA 518

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           Y++NG  +  L+ F  M++    P+  +  S+L A S+   +++A+
Sbjct: 519 YAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 239/477 (50%), Gaps = 7/477 (1%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQ 273
           N +++ +++ G+   A ++FD + E   VSW+  I     +    EAF L+ D+R    +
Sbjct: 78  NMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIE 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T++ LLS  G         QI     K+G+   + + N+L+  Y K   +  A  +
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQL 197

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F +++ KD+V++NS++ GYS  G   +A+++F  +    + P+ +T A++L A       
Sbjct: 198 FKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDT 257

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           K   QVH  ++K+ F+ +  + + L+  Y K + ++E  ++  E+ + + +  N + +  
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSY 317

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
            +     E+ +L+R +  +  +     F+ +L    +  +L  G+ IHC A+    + + 
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            VE+A++DMY KC   ++A++ F  I   S   W AM+  Y Q G + E  N+F+ M + 
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           GV  D+ T+ ++L +C +   +   R   S +    G +  +   + ++D   + G +  
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIR-SGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
           A  +  +MP   ++  W +L+SA    GN+D  L +  ++++   +PD+ S   +LS
Sbjct: 497 AIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 215/726 (29%), Positives = 350/726 (48%), Gaps = 52/726 (7%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIE 121
           A+  +  +   G+ PD F F +++KA   +Q+    + +H    K G +    + +  + 
Sbjct: 69  AISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVN 128

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y K G+I +A   F +  + D+V++ +M+       E++ +  +F  M    +    F+
Sbjct: 129 MYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFT 188

Query: 182 LTAVLGASFDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           L +V  A  ++  G    +Q+H F ++ G      N   NA++ +Y + G+  +A  +FD
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTN---NALVTMYAKLGRVYEAKTLFD 245

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              + D+VSW+  I++        EA      +  +  + N  T+ ++L +     +L  
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305

Query: 295 GKQIQAFC-YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
           GK+I AF       +E   +G AL+ MY  C Q    R +FD +  +    WN+MIAGY 
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYV 365

Query: 354 ENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            N F  +A+++F  M+ E  L PN  T++S+L A    +S      +HS ++K GF  D 
Sbjct: 366 RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDK 425

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + L+  Y +   +  ++ +   +++K+ V  N + +  V    H +AL L   +   
Sbjct: 426 YVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485

Query: 473 CRE------------------VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
             E                   N  T   VL  CAA+  L +GK IH  A+K    +D+ 
Sbjct: 486 QAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVA 545

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V SA++DMY KCG +  ++  F ++   ++  WN ++M Y  HG   E   LF +M + G
Sbjct: 546 VGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEG 605

Query: 575 -----VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
                ++P+E+TY+A+  S  H+G+V E       M   HG+ P  +HYAC+VDLLGR G
Sbjct: 606 DNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSG 665

Query: 630 LLEGAKMTIDQMPIP-PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
            +E A   I  MP        W SLL AC I+ N+++G +A   L  L P+     VL  
Sbjct: 666 QIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN-----VLDY 720

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
               S         L ++MKEK + KEPG SWI  G   H F AGD SH QSKE+++ L 
Sbjct: 721 GTKQSM--------LGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLE 772

Query: 749 KLYEHM 754
            L   M
Sbjct: 773 TLSLRM 778



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 287/589 (48%), Gaps = 48/589 (8%)

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
           F ++   +  M + G+  + F+  AVL A+  +++   G+Q+H    K G    +   + 
Sbjct: 66  FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG--QALPTAVP 123

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N+++N+Y +CG    A ++FDEIT  D VSW+  I AAC   E   A  LF+ +   +  
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183

Query: 274 INEYTMINLLSS----VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              +T++++  +    + G   L  GKQ+ AF  + G     +  NAL++MY K G+V +
Sbjct: 184 PTSFTLVSVAHACSNLING---LLLGKQVHAFVLRNGDWRTFT-NNALVTMYAKLGRVYE 239

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A+++FD    KD VSWN++I+  S+N  F +AL     ML+  + PNG T+AS+L A S+
Sbjct: 240 AKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSH 299

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINA 448
            + L    ++H+ ++ +  L+++S + C L+  Y  C    + + V   + ++     NA
Sbjct: 300 LEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNA 359

Query: 449 LASVLVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           + +  V      EA+EL+   ++      N  T S VL AC         + IH   +K 
Sbjct: 360 MIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKW 419

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +++D +V++A++DMY + G IE A+  F  + R  +  WN M+ GY   G + +  NL 
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479

Query: 568 NKMSK------------------FGVKPDEITYLAVLTSCCH-AGLVREARTYLSCMSDL 608
           + M +                  F +KP+ +T + VL  C   A L +    +   +  +
Sbjct: 480 HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM 539

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
             L   +   + +VD+  + G L  ++   +QM +  +   W  L+ A  ++G  +  L 
Sbjct: 540 --LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSV-RNVITWNVLIMAYGMHGKGEEALK 596

Query: 669 AGSKLL-------ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
              +++       E++P NE TY+ +    + +GM ++   L   MK K
Sbjct: 597 LFRRMVEEGDNNREIRP-NEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 266/589 (45%), Gaps = 41/589 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ + K G  L   +  +L++ + K  D   A R   +  NRD +++N++I+   RF 
Sbjct: 106 QLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFE 165

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLV 116
           +   A+ LF  +  + + P +FT  S+  AC +L    +    VH   L+ G   R +  
Sbjct: 166 EWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTN 224

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  YAK G +  A+  F    D D V++  ++     N  F+++      M   G+ 
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +L +VL A   ++    G++IH F +    L    + +  A++++Y  C Q     
Sbjct: 285 PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIE-NSFVGCALVDMYCNCKQPEKGR 343

Query: 234 KMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGE 289
            +FD +    +  W+  IA         EA  LF ++ F      N  T+ ++L +    
Sbjct: 344 LVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRC 403

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                 + I +   K GF +   + NAL+ MY + G++  ARSIF  +  KD VSWN+MI
Sbjct: 404 ESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMI 463

Query: 350 AGYSENGFFNQALDMFCHMLE------------------FSLIPNGYTMASILEAVSNSK 391
            GY   G  + AL++   M                    F L PN  T+ ++L   +   
Sbjct: 464 TGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALA 523

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L +  ++H++ +K     D ++ S L+  Y KC  LN S+ V  ++  +N +  N L  
Sbjct: 524 ALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIM 583

Query: 452 VLVYASCHAEALELYRTI---WGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
                    EAL+L+R +     + RE+  N  T+  +  + +    +++G  +    +K
Sbjct: 584 AYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLF-YTMK 642

Query: 507 ARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRD--SLAGWNAMM 551
           A++  +   +  + ++D+  + G IE+A    + +  +   +  W++++
Sbjct: 643 AKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 65/144 (45%)

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
           ++ L S    +S   +A+  Y  +  +    +   F  VLKA A + DL  GK +H    
Sbjct: 53  VSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVF 112

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K        V +++++MY KCG I+ A+R F +I       WN+M+    +   +    +
Sbjct: 113 KFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVH 172

Query: 566 LFNKMSKFGVKPDEITYLAVLTSC 589
           LF  M    V P   T ++V  +C
Sbjct: 173 LFRLMLLENVGPTSFTLVSVAHAC 196


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/580 (32%), Positives = 303/580 (52%), Gaps = 46/580 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA-------FGLFKD--- 266
           N++++   R G   D  ++F  + + D VS++  +A                 L +D   
Sbjct: 81  NSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAG 140

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +R +   ++   M+   +S  G+R L  G+Q+     ++GF      G+ L+ MY K G 
Sbjct: 141 VRPSRITMSGVVMV---ASALGDRAL--GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195

Query: 327 VNDARSIFDYL--------------------------IF-----KDSVSWNSMIAGYSEN 355
           + DAR +FD +                          +F     +DS++W +M+ G ++N
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  ++ALD+F  M    +  + YT  SIL A     +L++  Q+H++I ++ +  +  + 
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S L+  Y KC ++  ++ V   +  KN +   A+        C  EA+ ++  +     +
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T   V+ +CA +  LE+G   HCLAL +     + V +A++ +Y KCG+IEDA R 
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++       W A++MGYAQ G   E  +LF KM   GVKPD +T++ VL++C  +GLV
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            + R+Y   M   H ++P  +HY C++DL  R G L+ A+  I QMP  PDA  W +LLS
Sbjct: 496 DKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC + G++++G  A   LL+L P N ++YVLL +++AS G WNDV KLR+ M+++ + KE
Sbjct: 556 ACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKE 615

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           PG SWI      H F A D SH  S+ IY++L  L   MV
Sbjct: 616 PGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMV 655



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 212/468 (45%), Gaps = 76/468 (16%)

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML--EF 371
           GN+L+S   + G V D   +F  L  +D+VS+N+++AG+S  G   +A   +  +L  E 
Sbjct: 80  GNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEA 139

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + P+  TM+ ++   S         QVH  I++ GF       S L+  Y K   + ++
Sbjct: 140 GVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDA 199

Query: 432 KRVLSEIDKKNAVHINALASVLVYAS-------------------------------CHA 460
           +RV  E++ KN V  N + + L+                                    +
Sbjct: 200 RRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLES 259

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL+++R +      ++  TF  +L AC A+  LE+GK IH    +  Y+ ++FV SA++
Sbjct: 260 EALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALV 319

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KC ++  A+  FR++   ++  W AM++GY Q+GC  E   +F++M + G+KPD+ 
Sbjct: 320 DMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDF 379

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T  +V++SC +   + E   +  C++ + GL P +     +V L G+ G +E A    D+
Sbjct: 380 TLGSVISSCANLASLEEGAQF-HCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDE 438

Query: 641 MP----------------------------------IPPDAHIWQSLLSACTIYGNIDLG 666
           M                                   + PD   +  +LSAC+  G +D G
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG 498

Query: 667 LLAGSKLLELQPDN-----ESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
               S    +Q D+     +  Y  + +LY+ +G      +  K+M  
Sbjct: 499 R---SYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR 543



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 57/474 (12%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           +   +L+S   +    R   R       RD ++YNAL++G +R      A   +  L   
Sbjct: 78  VTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRD 137

Query: 76  --GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+RP   T S +V    +L +  +   VH   L+LGF +  +  S  ++ YAK G I 
Sbjct: 138 EAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIG 197

Query: 131 SAE------------MC-------------------FRDCLDLDNVAYTAMVCGYVWNGE 159
            A             MC                   F    + D++ +T MV G   NG 
Sbjct: 198 DARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGL 257

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
             ++ +VF  MR+ G+ +++++  ++L   GA   ++EG+QIH +  +  +   V   + 
Sbjct: 258 ESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNV--FVG 315

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDF 272
           +A++++Y +C     A  +F  +   +++SW+  I       C G EA  +F +++ +  
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGC-GEEAVRVFSEMQRDGI 374

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + +++T+ +++SS      L  G Q        G    V++ NAL+++YGKCG + DA  
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS-- 390
           +FD + F D VSW +++ GY++ G   + +D+F  ML   + P+G T   +L A S S  
Sbjct: 435 LFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGL 494

Query: 391 ----KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
               +S   +MQ    I+     LDD   +C+I  Y +   L +++  + ++ +
Sbjct: 495 VDKGRSYFHSMQQDHDIVP----LDDH-YTCMIDLYSRSGWLKQAEEFIKQMPR 543



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 229/485 (47%), Gaps = 55/485 (11%)

Query: 115 LVSG--FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-- 170
           LV+G   +   A++G +   E  F      D V+Y A++ G+   G   ++   +V +  
Sbjct: 77  LVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLR 136

Query: 171 RSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
              G+  +  +++ V+    A  D   G Q+H   +++GF  G      + ++++Y + G
Sbjct: 137 DEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGF--GAYAFTGSPLVDMYAKVG 194

Query: 228 QKLDAVKMFDE-------------------------------ITEPDVVSWSERIAAACD 256
              DA ++FDE                               I E D ++W+  +     
Sbjct: 195 PIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQ 254

Query: 257 G---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
                EA  +F+ +R     I++YT  ++L++ G    L  GKQI A+  +  + + V +
Sbjct: 255 NGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFV 314

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           G+AL+ MY KC  V  A ++F  +++K+ +SW +MI GY +NG   +A+ +F  M    +
Sbjct: 315 GSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGI 374

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+ +T+ S++ + +N  SL++  Q H   + SG     ++ + L+T YGKC ++ ++ R
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           +  E+   + V   AL           E ++L+  +     + +G TF  VL AC+    
Sbjct: 435 LFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGL 494

Query: 494 LEQGKA-IHCLALKARYDQDIFV----ESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAG 546
           +++G++  H +    + D DI       + +ID+Y + G ++ A+   +++  C D+  G
Sbjct: 495 VDKGRSYFHSM----QQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAF-G 549

Query: 547 WNAMM 551
           W  ++
Sbjct: 550 WATLL 554



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 49/363 (13%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           R LF+  + RD IT+  +++GL +      AL +F R+R +G+  D +TF S++ ACG+L
Sbjct: 231 RALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGAL 290

Query: 95  ---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
              +E + +H    +  +   V++ S  ++ Y+K   +  AE  FR  +  + +++TAM+
Sbjct: 291 AALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMI 350

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFL 208
            GY  NG  +++  VF EM+  G++ ++F+L +V+ +  +   ++EG Q H   +  G  
Sbjct: 351 VGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLR 410

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLR 268
             V   ++NA++ LY +CG   DA ++FDE++  D VSW+    A   G   FG  K+  
Sbjct: 411 PYVT--VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT----ALVMGYAQFGKAKE-- 462

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
                      I+L      E++L  G +     +         IG  ++S   + G V+
Sbjct: 463 ----------TIDLF-----EKMLSKGVKPDGVTF---------IG--VLSACSRSGLVD 496

Query: 329 DARSIF-----DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
             RS F     D+ I      +  MI  YS +G+  QA +    M      P+ +  A++
Sbjct: 497 KGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR---CPDAFGWATL 553

Query: 384 LEA 386
           L A
Sbjct: 554 LSA 556



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 47/91 (51%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q + L + +G      +S  L++ + K      A R   +    D +++ AL+ G A+F 
Sbjct: 399 QFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFG 458

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           ++   + LF+++  +G++PD  TF  ++ AC
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSAC 489


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 217/737 (29%), Positives = 354/737 (48%), Gaps = 80/737 (10%)

Query: 88  VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           +K C SL   +++H   +  G     +L +  I  Y  S     A       L L+ +  
Sbjct: 168 LKECNSLAHAKLLHQQSIMQGL--LFHLATNLIGTYIASNSTAYA------ILLLERLPP 219

Query: 148 TAMVCGYVWNGEFDKS------KEVFV---EMRSLGLELNEFSLTAVLGASFDVKEGEQI 198
           +     + WN    ++      ++VF    +M+SLG   + ++   V  A  ++      
Sbjct: 220 SPSSV-FWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLG 278

Query: 199 ---HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE---PDVVSWSERIA 252
              H    + GF S V   + NA++++Y +CG    A  MFD++      D+VSW+  ++
Sbjct: 279 ASLHATVSRSGFASNV--FVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVS 336

Query: 253 A---ACDGVEAFGLFKDLRFNDFQINEY-TMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           A   A D   A  LF  +        +  +++N+L +         G+Q+  F  + G +
Sbjct: 337 AYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLV 396

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
           + V +GNA++ MY KCG++ +A  +F  + FKD VSWN+M+ GYS+ G    AL +F  M
Sbjct: 397 DDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERM 456

Query: 369 LEFSL-----------------------------------IPNGYTMASILEAVSNSKSL 393
            E ++                                    PN  T+ S+L A  +  +L
Sbjct: 457 TEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGAL 516

Query: 394 KQAMQVHSHIIKSGFLLDDS--------MISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
               + H + IK    LD          +I+ LI  Y KC +   ++++   +  K+   
Sbjct: 517 LHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDV 576

Query: 446 INALASVLVYASCHAEA---LELYRTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAI 500
           +     +  YA  H +A   L+L+  ++   + +  N  T S  L ACA +  L  G+ +
Sbjct: 577 VTWTVMIGGYAQ-HGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQV 635

Query: 501 HCLALKARYDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           H   L+  Y    +FV + +IDMY K G ++ A+  F  + + +   W ++M GY  HG 
Sbjct: 636 HAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGR 695

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
             +   +F++M K  + PD IT+L VL +C H+G+V     + + MS   G+ P  EHYA
Sbjct: 696 GEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYA 755

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           C+VDL GR G L  A   I++MP+ P   +W +LLSAC ++ N++LG  A ++LLEL+  
Sbjct: 756 CMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESG 815

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
           N+ +Y LLSN+YA+A  W DV ++R  MK   + K PG SWI        FY GD SH Q
Sbjct: 816 NDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQ 875

Query: 740 SKEIYKELIKLYEHMVA 756
           S++IY+ L  L + + A
Sbjct: 876 SQQIYETLADLIQRIKA 892



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 252/562 (44%), Gaps = 86/562 (15%)

Query: 46  IITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIV---HG 102
           +  +N LI              L+ +++  G  PD +TF  + KAC +L    +    H 
Sbjct: 224 VFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHA 283

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSA-----EMCFRDCLDLDNVAYTAMVCGYVWN 157
              + GF+S V++ +  +  Y K G +  A     ++C R   DL  V++ ++V  Y+W 
Sbjct: 284 TVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDL--VSWNSVVSAYMWA 341

Query: 158 GEFDKSKEVFVEMRSLGL-ELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCN 213
            + + +  +F +M +  L   +  SL  +L A   +     G Q+HGF ++ G +  V  
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV-- 399

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS-------------------ERI--- 251
            + NA++++Y +CG+  +A K+F  +   DVVSW+                   ER+   
Sbjct: 400 FVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEE 459

Query: 252 ----------------AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
                           A    G EA  +F+ +     + N  T+++LLS+      L  G
Sbjct: 460 NIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG 519

Query: 296 KQIQAFCYKVGFM----------EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--V 343
           K+    CY + F+          + + + N LI MY KC     AR +FD +  KD   V
Sbjct: 520 KETH--CYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVV 577

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           +W  MI GY+++G  N AL +F  M +   S+ PN +T++  L A +   +L+   QVH+
Sbjct: 578 TWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHA 637

Query: 402 HIIKSGFLLDDSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +++++ +     M+   +CLI  Y K   ++ ++ V   + ++NAV   +L +       
Sbjct: 638 YVLRNFY--GSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGR 695

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             +AL ++  +       +G TF +VL AC+       G   H +    R  +D  V+  
Sbjct: 696 GEDALRVFDEMRKVPLVPDGITFLVVLYACS-----HSGMVDHGINFFNRMSKDFGVDPG 750

Query: 519 ------VIDMYCKCGTIEDAKR 534
                 ++D++ + G + +A +
Sbjct: 751 PEHYACMVDLWGRAGRLGEAMK 772



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 230/496 (46%), Gaps = 60/496 (12%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR---DIITYNALISGLARF 59
           ++ + ++G   +  +   ++S + K    R A     D  +R   D++++N+++S     
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341

Query: 60  CQSGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
             +  AL LF ++  + L  PD  +  +++ AC SL        VHG  ++ G    V++
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401

Query: 116 VSGFIENYAKSGEIVSA-----EMCFRDC------------------------------L 140
            +  ++ YAK G++  A      M F+D                               +
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQ 197
           +LD V +TA++ GY   G+  ++ +VF +M   G   N  +L ++L A   V     G++
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521

Query: 198 IHGFGVKV-----GFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEIT--EPDVVSWSE 249
            H + +K      G   G  +  + N ++++Y +C     A KMFD ++  + DVV+W+ 
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581

Query: 250 RI---AAACDGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYK 304
            I   A   D   A  LF  +   D  I  N++T+   L +      LR G+Q+ A+  +
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641

Query: 305 VGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
             +  V + + N LI MY K G V+ A+ +FD +  +++VSW S++ GY  +G    AL 
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTY 422
           +F  M +  L+P+G T   +L A S+S  +   +   + + K  G        +C++  +
Sbjct: 702 VFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLW 761

Query: 423 GKCNALNESKRVLSEI 438
           G+   L E+ ++++E+
Sbjct: 762 GRAGRLGEAMKLINEM 777



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 120/238 (50%), Gaps = 28/238 (11%)

Query: 36  RFLFDT---QNRDIITYNALISGLARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKA 90
           R +FD+   ++RD++T+  +I G A+   +  AL+LF  +    + ++P+ FT S  + A
Sbjct: 563 RKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVA 622

Query: 91  CG---SLQENEIVHGVCLKLGFSSRVYLVSG-FIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           C    +L+    VH   L+  + S +  V+   I+ Y+KSG++ +A++ F +    + V+
Sbjct: 623 CARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVS 682

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHG------ 200
           +T+++ GY  +G  + +  VF EMR + L  +  +   VL A      G   HG      
Sbjct: 683 WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYAC--SHSGMVDHGINFFNR 740

Query: 201 ----FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
               FGV  G     C      +++L+ R G+  +A+K+ +E+  EP  V W   ++A
Sbjct: 741 MSKDFGVDPGPEHYAC------MVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 10/298 (3%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI--DKK 441
           + A+    SL  A  +H   I  G L    + + LI TY   N+   +  +L  +     
Sbjct: 165 ITALKECNSLAHAKLLHQQSIMQGLLF--HLATNLIGTYIASNSTAYAILLLERLPPSPS 222

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           +    N L    ++     +   LYR +       +  TF  V KACA ++ L  G ++H
Sbjct: 223 SVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLH 282

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR---DSLAGWNAMMMGYAQHG 558
               ++ +  ++FV +AV+ MY KCG +  A   F  +C      L  WN+++  Y    
Sbjct: 283 ATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWAS 342

Query: 559 CYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
             +    LF+KM ++  + PD I+ + +L +C         R  +   S   GL+  +  
Sbjct: 343 DANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ-VHGFSIRSGLVDDVFV 401

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
              +VD+  + G +E A     +M    D   W ++++  +  G ++  L    ++ E
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKF-KDVVSWNAMVTGYSQAGRLEHALSLFERMTE 458


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/553 (33%), Positives = 299/553 (54%), Gaps = 40/553 (7%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +FD I EP+++ W+      A + D V A  L+  +       + YT   LL S   
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +I + G+QI     K+GF   + +  +LISMY + G++ DAR +FD             
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PN 376
                              +  KD VSWN+MI+GY E G + +AL++F  M+  + + P+
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             TM +++ A + S S++    VHS I   GF  +  +++ LI  Y K   +  +  +  
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ 
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 341

Query: 497 GKAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF-RKICRDSLAGWNAMMM 552
           G+ IH      LK        +++++IDMY KCG I+ A++ F   +   SL+ WNAM+ 
Sbjct: 342 GRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMIS 401

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G+A HG  +   ++F++M   G++PD+IT++ +L++C H+G++   R     M+  + + 
Sbjct: 402 GFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEIT 461

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P+LEHY C++DLLG  GL + A+  I+ MP+ PD  IW SLL AC I+GN++LG     K
Sbjct: 462 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKK 521

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE-PGYSWIHVGGYTHHFY 731
           L++++P N  +YVLLSN+YA+AG WN+V K+R  + +K + K+ PG S I +    H F 
Sbjct: 522 LIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFI 581

Query: 732 AGDSSHSQSKEIY 744
            GD  H Q++EIY
Sbjct: 582 IGDKLHPQNREIY 594



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 59/490 (12%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISG 55
           I++ +IK G H     L  +L   ++S    F  F  A   +FDT Q  +++ +N +  G
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVS--PHFDGFPYAIS-VFDTIQEPNLLIWNTMFRG 63

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
            A       ALKL+  +   GL PD++TF  L+K+C      +E + +HG  LKLGF   
Sbjct: 64  HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV----------------- 155
           +Y+ +  I  YA++G +  A   F      D V+YTA++ GYV                 
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183

Query: 156 -----WN---------GEFDKSKEVFVEMRSL-GLELNEFSLTAVLGA---SFDVKEGEQ 197
                WN         G + ++ E+F EM  +  +  +E ++  V+ A   S  ++ G  
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           +H +    GF S +   + NA+++LY + G+   A ++FD +   DV+SW+  I      
Sbjct: 244 VHSWINDHGFASNL--KIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301

Query: 258 ---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV---GFMEVV 311
               EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K        V 
Sbjct: 302 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENGFFNQALDMFCHMLE 370
           S+  +LI MY KCG ++ A+ +FD  +   S+S WN+MI+G++ +G  N A D+F  M  
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNAL 428
             + P+  T   +L A S+S  L     +   + + G+ +   +    C+I   G     
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTR-GYEITPKLEHYGCMIDLLGHSGLF 480

Query: 429 NESKRVLSEI 438
            E++ +++ +
Sbjct: 481 KEAEEMINTM 490



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 41/297 (13%)

Query: 399 VHSHIIKSG-----FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +H+ +IK+G     + L   +  C+++ +   +    +  V   I + N +  N +    
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPH--FDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +S    AL+LY  +       +  TF  +LK+CA     ++G+ IH   LK  +D DI
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 514 FVESAVIDMYCKCGTIEDAKRA-------------------------------FRKICRD 542
           +V +++I MY + G +EDA++                                F +I   
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREARTY 601
            +  WNAM+ GY + G Y E   LF +M     V+PDE T + V+++C  +  +   R  
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
            S ++D HG    L+    ++DL  + G +E A    D +    D   W +L+   T
Sbjct: 245 HSWIND-HGFASNLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLIGGYT 299


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 204/698 (29%), Positives = 346/698 (49%), Gaps = 48/698 (6%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L P LS  +  H   FA +  A ++L      D +T  A++        S P +      
Sbjct: 16  LLPTLSCPVAPHRRGFAAYAAALQWL-----EDELTSLAILP-------SVPGV------ 57

Query: 73  RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG--FIENYAKSG 127
                  D+F  +  ++ C   G  +    VHG  ++ G   R+ L      +  Y K G
Sbjct: 58  -------DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLG 110

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            + SA   F    + + V++  +V  +   G+F+ +  +F  +R  G E+N+F LT +L 
Sbjct: 111 PLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLK 170

Query: 188 ASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNA-----IMNLYVRCGQKLDAVKMFDEI 239
            +  +        +H    K+G       H +NA     +++ Y  C    DA  +F+ I
Sbjct: 171 LAIAMDAAGLAGGVHSCAWKLG-------HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI 223

Query: 240 TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              D V W+  ++   +      AF +F  +R +  + N + + ++L +      +  GK
Sbjct: 224 VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGK 283

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            I     K        +G AL+ MY KCG + DAR  F+ + + D +  + MI+ Y+++ 
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              QA ++F  ++  S++PN Y+++S+L+A +N   L    Q+H+H IK G   D  + +
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+  Y KCN ++ S ++ S +   N V  N +      +    EAL ++  +  +    
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
              T+S VL+ACA+   +     IHC   K+ ++ D  + +++ID Y KCG I DA + F
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF 523

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
           + +    +  WNA++ GYA HG   +   LF++M+K  V+ ++IT++A+L+ C   GLV 
Sbjct: 524 QHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN 583

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
              +    M   HG+ P +EHY CIV LLGR G L  A   I  +P  P A +W++LLS+
Sbjct: 584 HGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS 643

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
           C I+ N+ LG  +  K+LE++P +E+TYVLLSN+YA+A
Sbjct: 644 CIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 681



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 178/361 (49%), Gaps = 15/361 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I+   IK  +  +P +   L+  + K  D + A R  F+     D+I  + +IS  A+  
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA-RLAFEMIPYDDVILLSFMISRYAQSN 343

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q+  A +LF RL    + P+ ++ SS+++AC ++ +    + +H   +K+G  S +++ +
Sbjct: 344 QNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGN 403

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK  ++ S+   F    D + V++  +V G+  +G  +++  VF EM++  +  
Sbjct: 404 ALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPC 463

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            + + ++VL A   +  ++   QIH    K  F +     + N++++ Y +CG   DA+K
Sbjct: 464 TQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV--IGNSLIDTYAKCGYIRDALK 521

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D++SW+  I+         +A  LF  +  ++ + N+ T + LLS      +
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 292 LRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
           +  G  +  +     G    +     ++ + G+ G++NDA + I D      ++ W +++
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 350 A 350
           +
Sbjct: 642 S 642



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 28/264 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  IK GH  D  +   L+  + K  D   + +     ++ + +++N ++ G   F 
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVG---FS 441

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           QSG    AL +F  ++   +     T+SS+++AC    S++    +H    K  F++   
Sbjct: 442 QSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV 501

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I+ YAK G I  A   F+  ++ D +++ A++ GY  +G+   + E+F  M    
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGF----------GVKVGFLSGVCNHLNNAIMNLYV 224
           +E N+ +  A+L  S     G   HG           G+K       C      I+ L  
Sbjct: 562 VESNDITFVALL--SVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC------IVRLLG 613

Query: 225 RCGQKLDAVKMFDEI-TEPDVVSW 247
           R G+  DA++   +I + P  + W
Sbjct: 614 RAGRLNDALQFIGDIPSAPSAMVW 637


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 312/602 (51%), Gaps = 16/602 (2%)

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIH 199
           D V++ ++V  ++ NG F  ++   V M   G  LN  SL +V+   G   + K G  IH
Sbjct: 5   DVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIH 64

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV- 258
              VKVG  + V  +L NA++++Y + G    ++++FD + E + VSW+  I    +   
Sbjct: 65  ALAVKVGLNTMV--NLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGF 122

Query: 259 --EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             +   +F+ +  ++      T+ +LL ++        G+++  +  K      + + N+
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANS 182

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L+ MY K G +  A +IF+ +  ++ VSWN+MIA   +NG   +A  +   M +    PN
Sbjct: 183 LVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPN 242

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T+ ++L A +   SLK   Q+H+  I+ G + D  + + LI  Y KC  L+ ++ +  
Sbjct: 243 SITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF- 301

Query: 437 EIDKKNAVHINALASVLVYASCHA--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
           E  +K+ V  N L  +L Y+      E+L L++ +     + +  +F   L AC  ++  
Sbjct: 302 ERSEKDDVSYNTL--ILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVF 359

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + GK IHC+ ++       F+ ++++D+Y K G +  A + F KI +  +A WN M++GY
Sbjct: 360 KHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGY 419

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HG       LF  M   G+  D ++Y+AVL +C H GLV + + Y S M     + PQ
Sbjct: 420 GMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQ 478

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
             HYAC+VDLLGR G L      I  MP P ++ +W +LL AC I+GNI+L   A   L 
Sbjct: 479 QMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLF 538

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI--HVGGYTHHFYA 732
           EL+P++   Y L+ N+YA  G WN+  K+RK MK + + K P YSW+    G     F  
Sbjct: 539 ELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLV 598

Query: 733 GD 734
           GD
Sbjct: 599 GD 600



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 220/437 (50%), Gaps = 16/437 (3%)

Query: 239 ITEPDVVSWSERIAAACDGVEAFGLFKDLRF-------NDFQINEYTMINLLSSVGGERI 291
           + E DVVSW+  ++A        G+F D R        + F +N  ++++++ + G E+ 
Sbjct: 1   MPERDVVSWNSLVSAFL----VNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQE 56

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            + G  I A   KVG   +V++ NAL+ MYGK G V  +  +FD ++ ++ VSWNS I  
Sbjct: 57  EKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGC 116

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           +   GF+   L MF  M E +++P   T++S+L A+    S     +VH + IK    LD
Sbjct: 117 FLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLD 176

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + + L+  Y K  +L ++  +  ++  +N V  NA+ + LV      EA  L   +  
Sbjct: 177 IFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQK 236

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S    N  T   VL ACA M  L+ GK IH  +++     D+F+ +A+IDMY KCG +  
Sbjct: 237 SGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSL 296

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+  F +  +D ++ +N +++GY+Q     E   LF +M   G+  D ++++  L++C +
Sbjct: 297 ARNIFERSEKDDVS-YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTN 355

Query: 592 AGLVREAR-TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
             + +  +  +   +  L    P L +   ++DL  + G+L  A    +++    D   W
Sbjct: 356 LSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKI-TKKDVASW 412

Query: 651 QSLLSACTIYGNIDLGL 667
            +++    ++G ID+  
Sbjct: 413 NTMILGYGMHGQIDIAF 429



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 126/560 (22%), Positives = 244/560 (43%), Gaps = 52/560 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++L +K G +    L+  L+  + KF D   + +       ++ +++N+ I        
Sbjct: 63  IHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGF 122

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
            G  L++F ++    + P + T SSL+ A    GS      VHG  +K      +++ + 
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANS 182

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A   F    D + V++ AM+   V NG   ++  +  +M+  G   N
Sbjct: 183 LVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPN 242

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L  VL A      +K G+QIH + ++ G +  +   ++NA++++Y +CGQ   A  +
Sbjct: 243 SITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDL--FISNALIDMYSKCGQLSLARNI 300

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E +E D VS++  I          E+  LFK +R      +  + +  LS+     + 
Sbjct: 301 F-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVF 359

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           + GK+I     +        + N+L+ +Y K G +  A  IF+ +  KD  SWN+MI GY
Sbjct: 360 KHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGY 419

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +G  + A ++F  M    L  +  +  ++L A S+   + +  +  S ++        
Sbjct: 420 GMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQ 479

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
              +C++   G+   L++     +EI +      N+               +++  + G+
Sbjct: 480 MHYACMVDLLGRAGQLSKC----AEIIRDMPFPANS---------------DVWGALLGA 520

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
           CR ++G+             +L Q  A H   LK  +       + +I+MY + G   +A
Sbjct: 521 CR-IHGN------------IELAQWAAEHLFELKPEHSG---YYTLMINMYAETGRWNEA 564

Query: 533 KR-----AFRKICRDSLAGW 547
            +       RK+ ++    W
Sbjct: 565 NKIRKLMKSRKVQKNPAYSW 584



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 192/392 (48%), Gaps = 21/392 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++   IK    LD  ++ +L+  + KF    +A       ++R+++++NA+I+ L +  
Sbjct: 163 EVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG 222

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A +L   ++  G  P++ T  +++ AC    SL+  + +H   ++ G    +++ +
Sbjct: 223 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 282

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K G++  A   F    + D+V+Y  ++ GY  +    +S  +F +MRS+G++ 
Sbjct: 283 ALIDMYSKCGQLSLARNIFERS-EKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 341

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S    L A  ++   K G++IH   V+   LSG    L+N++++LY + G  + A K
Sbjct: 342 DAVSFMGALSACTNLSVFKHGKEIHCVLVR-RLLSG-HPFLSNSLLDLYTKGGMLVTASK 399

Query: 235 MFDEITEPDVVSWSERIAAACDGVE-----AFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +F++IT+ DV SW+  I     G+      AF LF+ ++ +    +  + I +L++    
Sbjct: 400 IFNKITKKDVASWNTMILGY--GMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHG 457

Query: 290 RILRAGKQIQAFCYKVG-FMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
            ++  GK+   F   V   +E   +  A ++ + G+ GQ++    I   + F  +S  W 
Sbjct: 458 GLVDKGKKY--FSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWG 515

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +++     +G    A     H+ E     +GY
Sbjct: 516 ALLGACRIHGNIELAQWAAEHLFELKPEHSGY 547


>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
 gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
          Length = 849

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 208/703 (29%), Positives = 369/703 (52%), Gaps = 21/703 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L+I      D ++   L+    K  D   A RF      RD+I++  +++  AR   
Sbjct: 148 VHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGH 207

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              A   + R+  +G+ P+  TF +++ AC S ++ E+V+G  ++  + S   + +  I 
Sbjct: 208 IAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAELVYGNVVEAEWESDTMVANASIN 267

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            ++K G +  A   F      D  ++ AMV     +G   ++ E+F  M S  + +++ +
Sbjct: 268 MFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPS-EVAVDKTT 326

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L   L    A   +++G+ IH    ++G  + V      A++ +Y RCG   +A ++FD 
Sbjct: 327 LVIALSTCAAPESLEDGKSIHSRVARLGLETDVVA--GTALVTMYSRCGDLGEARRVFDG 384

Query: 239 ITEPDVVSWSERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           I   +VVSW+  IAA          A  +F+ +  +  +    T +N++S+V  + +   
Sbjct: 385 ILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSV--- 441

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+  +    G      IG+AL++MY + G + DAR +F+ +I +D  +WN+++     
Sbjct: 442 GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +G   +AL+ F  ML      N  T    L AVS  + +    ++H  I +SG   D+++
Sbjct: 502 HGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDR-VCYGRRLHGLIAESGLEADNNV 560

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVH-INALASVLVYASCHAEALELYRTIWGSC 473
            + LI+ Y +C +L +++     ++ K+ V   + +A+ +   SC  EA++L++ +    
Sbjct: 561 ANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQ-EAIDLFQRME--- 616

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            E +  TF+ VL+AC  ++   +GK +H  A +   + ++FV +A+I M+ K G + +A+
Sbjct: 617 LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEAR 676

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           R F  +   +LA WNAM+ GYAQ G    V + F+ M + GV PD IT+LAV+++C HAG
Sbjct: 677 RIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAG 736

Query: 594 LVRE-ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           LV + ART+ S  +D +G+   LE Y C++DLL R G LE A   +  MP  P    W++
Sbjct: 737 LVEKGARTFASMGTD-YGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKT 795

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           LL+AC I G++  G  A   ++E +P   + +V LSN+ + AG
Sbjct: 796 LLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSNMSSIAG 838



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 171/657 (26%), Positives = 314/657 (47%), Gaps = 16/657 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +YS +   G  LD     +++  F K      A R      +R ++ + ++++       
Sbjct: 50  VYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDED 109

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              A   F R++ +G+ PD  TF S++ AC SL + E+VH + +     S V + +  ++
Sbjct: 110 VDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQGELVHRLIIDKNLESDVVIGNALMK 169

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
             AK  ++  A   F+     D +++T MV  Y  NG   ++   ++ M   G+  N  +
Sbjct: 170 MLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNIT 229

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
             AVL A    ++ E ++G  V+  + S     + NA +N++ +CG    A  +F  +  
Sbjct: 230 FLAVLAACSSARDAELVYGNVVEAEWESD--TMVANASINMFSKCGCLDRARDVFHRMKR 287

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV SW+  +AA        EA  LF+ +  ++  +++ T++  LS+      L  GK I
Sbjct: 288 WDVKSWNAMVAALAQHGFSSEALELFRRMP-SEVAVDKTTLVIALSTCAAPESLEDGKSI 346

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN-GF 357
            +   ++G    V  G AL++MY +CG + +AR +FD ++ K+ VSWN+MIA Y  +   
Sbjct: 347 HSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESL 406

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            ++AL++F  ML   + P   T  +++ AV      K   Q+H  I+ +G   D  + S 
Sbjct: 407 HSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGK---QLHGWIVDTGLYSDSFIGSA 463

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L+  Y +  +L +++RV  +I +++    NA+  V V      EALE +  +       N
Sbjct: 464 LVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGN 523

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            +TF + L A +    +  G+ +H L  ++  + D  V +A+I MY +C ++EDA+  F 
Sbjct: 524 RATFLLALSAVSP-DRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFD 582

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++   S+  W +++      G   E  +LF +M    ++PD +T+  VL +C      RE
Sbjct: 583 RLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFTTVLEACTIVSAHRE 639

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            +   S   +L GL   +     ++ +  + G L  A+   + +  P  A  W ++L
Sbjct: 640 GKLVHSRAREL-GLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLA-CWNAML 694



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 161/343 (46%), Gaps = 9/343 (2%)

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           G +++ M+ KC  ++DA  +F+ ++ +  V W SM+  + ++   ++A   F  M    +
Sbjct: 66  GASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGV 125

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           +P+  T  SIL A    +SL Q   VH  II      D  + + L+    KC  L+ + R
Sbjct: 126 LPDRVTFISILNAC---ESLAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAAR 182

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
               + +++ +    + +        AEA   Y  +       N  TF  VL AC++  D
Sbjct: 183 FFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARD 242

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            E    ++   ++A ++ D  V +A I+M+ KCG ++ A+  F ++ R  +  WNAM+  
Sbjct: 243 AE---LVYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAA 299

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
            AQHG   E   LF +M    V  D+ T +  L++C     + + ++  S ++ L GL  
Sbjct: 300 LAQHGFSSEALELFRRMPS-EVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARL-GLET 357

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +     +V +  R G L  A+   D + +  +   W ++++A
Sbjct: 358 DVVAGTALVTMYSRCGDLGEARRVFDGI-LGKNVVSWNNMIAA 399



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 11/260 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +++ L+ ++G   D  ++  LIS + +      A R  FD  +++ I+++ ++I+     
Sbjct: 544 RLHGLIAESGLEADNNVANALISMYARCKSLEDA-RNTFDRLEDKSIVSWTSVIAACVDL 602

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                A+ LF R+    L PD  TF+++++AC    + +E ++VH    +LG  S V++ 
Sbjct: 603 GSCQEAIDLFQRME---LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVA 659

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  ++K G +  A   F          + AM+ GY   G      + F  M+  G+ 
Sbjct: 660 TALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVA 719

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVK 234
            +  +  AV+ A       E+       +G   GV + L +   +++L  R GQ  +A  
Sbjct: 720 PDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYD 779

Query: 235 MFDEIT-EPDVVSWSERIAA 253
               +   P  V+W   +AA
Sbjct: 780 FLQGMPCGPSDVTWKTLLAA 799



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/370 (19%), Positives = 158/370 (42%), Gaps = 33/370 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++  ++  G + D  + + L++ + +     D RR F  + +   RD+  +NA++    
Sbjct: 444 QLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIE---RDVFAWNAIVGVCV 500

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSR 112
              Q   AL+ F R+  +G   +  TF   + A  ++  + +     +HG+  + G  + 
Sbjct: 501 GHGQPREALEWFSRMLLEGASGNRATF---LLALSAVSPDRVCYGRRLHGLIAESGLEAD 557

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
             + +  I  YA+   +  A   F    D   V++T+++   V  G   ++ ++F  M  
Sbjct: 558 NNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME- 616

Query: 173 LGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             LE +  + T VL A   V   +EG+ +H    ++G  S V   +  A+++++ + G  
Sbjct: 617 --LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNV--FVATALIHMHSKFGNL 672

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A ++F+ +  P +  W+  +   A           F  ++      +  T + ++S+ 
Sbjct: 673 GEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSAC 732

Query: 287 GGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL----IFKD 341
               ++  G +   +     G    +     LI +  + GQ+ +A   +D+L        
Sbjct: 733 SHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEA---YDFLQGMPCGPS 789

Query: 342 SVSWNSMIAG 351
            V+W +++A 
Sbjct: 790 DVTWKTLLAA 799


>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
 gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
          Length = 704

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 197/655 (30%), Positives = 326/655 (49%), Gaps = 25/655 (3%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-- 177
           ++  A+S  +  A   F      D VAY  ++ G+   G+F  +  +F  +R+    L  
Sbjct: 8   LKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAP 67

Query: 178 -NEFSLTAVL---GASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            + F L+ V     A+ D +       +H F V+   +S V   +  A+ ++Y + G   
Sbjct: 68  ADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSV--FVATALADVYAKAGCLG 125

Query: 231 DAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A+K+FDE+   +VVSW+  +A+   A    EA   F ++R +    + Y     L++  
Sbjct: 126 LALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 185

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
              +L  G+++ AFC K+G      + N L ++Y +C  V+ A +    +  +D  +W +
Sbjct: 186 DAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTT 245

Query: 348 MIAGYSENGFFNQALDMFCHMLE----FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           +I+ Y + G   +A++ F  ML      +  PN YT A+++ A ++   +    Q+H+  
Sbjct: 246 VISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQA 305

Query: 404 IKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            + GF    S+ + L+T Y +    L+ +  V  E   K+ V  +A+ S         +A
Sbjct: 306 ARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDA 365

Query: 463 LELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
             L+R +     C   N  T + +L  CA    L+ G+ +H LA+ A  +    + SA+I
Sbjct: 366 FALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALI 425

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY K G++ DA   F    +D +  W AM++GYA+HG   +   LF +M   G+KPD +
Sbjct: 426 DMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHV 485

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T++ VL +CCHAG V     YL+ M+ ++GL P  EHY C+VDLLGR G +  A+  I +
Sbjct: 486 TFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGK 545

Query: 641 MPI-PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +     D  +W SLL AC   G  + G  A  + +E +P     +V ++NLYAS G W++
Sbjct: 546 IAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHE 605

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHH---FYAGDSSHSQSKEIYKELIKLY 751
             + R  MK+K + K  G+S I VGG       F A D +H Q   IY+ L  +Y
Sbjct: 606 AAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELIY 660



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 141/557 (25%), Positives = 253/557 (45%), Gaps = 56/557 (10%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           ++T L   + K      A +   +  +++++++  L++ L R  +   AL+ F  +R  G
Sbjct: 110 VATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASG 169

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +  D++ +++ + AC   G L     VH  C KLG  S  Y+ +     YA+  ++  A 
Sbjct: 170 VHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRAL 229

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM----RSLGLELNEFSLTAVLGAS 189
                    D  A+T ++  YV  G   ++ E FV M     S+    NE++  AV+ A 
Sbjct: 230 AAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAAC 289

Query: 190 FDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV-KMFDEITEPDVV 245
            D+     GEQ+H    + GF       + N+++ LY R    L A   +F E    DVV
Sbjct: 290 ADIAWVCLGEQLHAQAARKGF--ACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVV 347

Query: 246 SWSERIAA-ACDGV--EAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQA 300
           SWS  I+  A +G+  +AF LF+++R +    + NE+T+ +LLS       L AG+Q+  
Sbjct: 348 SWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHT 407

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
                G      I +ALI MYGK G + DA  +F + +  D VSW +MI GY+E+G   +
Sbjct: 408 LAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKK 467

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLI 419
           AL++F  M    L P+  T   +L A  ++  ++  ++  + + +  G         C++
Sbjct: 468 ALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVV 527

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
              G+   +NE++ ++ +I                                 +  E +G 
Sbjct: 528 DLLGRAGRINEAEELIGKI---------------------------------AANERDGV 554

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
            ++ +L+ACAA  + E GK     A++A          A+ ++Y   G   +A +    +
Sbjct: 555 VWTSLLRACAARGEEETGKKAAERAMEAE-PWGAGAHVAMANLYASKGQWHEAAQERHMM 613

Query: 540 CRDSL---AGWNAMMMG 553
            +  +   AGW+++ +G
Sbjct: 614 KQKGVVKGAGWSSITVG 630



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 256/576 (44%), Gaps = 47/576 (8%)

Query: 21  LISHFTKFADFRRAFRF-----LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           ++ H  +     R+ R      LFD    RD + Y  L++G A       A+ LF RLR 
Sbjct: 1   MLDHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRA 60

Query: 75  QG--LRP-DAFTFSSLVKACGS------LQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
               L P D F  S + K+C +      L     +H   ++    S V++ +   + YAK
Sbjct: 61  SSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAK 120

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
           +G +  A   F +    + V++T +V      G   ++   F EMR+ G+  + ++  A 
Sbjct: 121 AGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAA 180

Query: 186 LGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L A  D   +  G ++H F  K+G  S    ++ N +  LY RC     A+     +   
Sbjct: 181 LTACADAGLLSRGREVHAFCAKLGLDS--TPYVANTLATLYARCSDVDRALAAVSRMGTR 238

Query: 243 DVVSWSERIAA------ACDGVEAF-GLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           DV +W+  I+A      A + +EAF  + ++        NEYT   ++++      +  G
Sbjct: 239 DVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLG 298

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGK-CGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           +Q+ A   + GF    S+ N+L+++Y +  G ++ A ++F   + KD VSW+++I+GY++
Sbjct: 299 EQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQ 358

Query: 355 NGFFNQALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
            G    A  +F  M   S    PN +T+AS+L   + + SL    Q+H+  + +G     
Sbjct: 359 EGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHA 418

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S LI  YGK  ++ ++  V S   K + V   A+           +ALEL++ +   
Sbjct: 419 MIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHV 478

Query: 473 CREVNGSTFSIVLKACAAMTDLEQG-------KAIHCL-ALKARYDQDIFVESAVIDMYC 524
             + +  TF  VL AC    ++E G         I+ L   K  Y         V+D+  
Sbjct: 479 GLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHY-------GCVVDLLG 531

Query: 525 KCGTIEDAKRAFRKICRDSLAG--WNAMMMGYAQHG 558
           + G I +A+    KI  +   G  W +++   A  G
Sbjct: 532 RAGRINEAEELIGKIAANERDGVVWTSLLRACAARG 567



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 163/397 (41%), Gaps = 46/397 (11%)

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS--L 373
           A +    +  ++ DA  +FD +  +D V++ +++AG++  G F  A+ +F  +   S  L
Sbjct: 6   ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPL 65

Query: 374 IPNGYTMASIL----EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
            P    + S++     A ++++ L  A  +H+  ++S  +    + + L   Y K   L 
Sbjct: 66  APADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLG 125

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            + +V  E+  KN V    L + L  A    EAL  +  +  S    +   ++  L ACA
Sbjct: 126 LALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 185

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
               L +G+ +H    K   D   +V + +  +Y +C  ++ A  A  ++    +A W  
Sbjct: 186 DAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTT 245

Query: 550 MMMGYAQHGCYHEVSNLFNKM----SKFGVKPDEITYLAVLTSCC-----------HAGL 594
           ++  Y Q G   E    F +M    S     P+E TY AV+ +C            HA  
Sbjct: 246 VISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQA 305

Query: 595 VRE----ARTYLSCMSDLH----------------GLIPQLEHYACIVDLLGRVGLLEGA 634
            R+    AR+  + +  L+                 ++  +  ++ I+    + GL E A
Sbjct: 306 ARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDA 365

Query: 635 KMTIDQMP-----IPPDAHIWQSLLSACTIYGNIDLG 666
                +M        P+     SLLS C    ++D G
Sbjct: 366 FALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAG 402



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 27/281 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARF 59
           Q+++   + G      ++ +L++ +T+ A    A   +F ++  +D+++++A+ISG A+ 
Sbjct: 300 QLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQE 359

Query: 60  CQSGPALKLFDRLRYQG--LRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
             +  A  LF  +R+     RP+ FT +SL+  C    SL     +H + +  G      
Sbjct: 360 GLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAM 419

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  I+ Y KSG ++ A++ F   +  D V++TAM+ GY  +G   K+ E+F EM  +G
Sbjct: 420 IRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVG 479

Query: 175 LELNEFSLTAVLGASFDVKEGE----------QIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           L+ +  +   VL A     E E          QI+G       L     H    +++L  
Sbjct: 480 LKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYG-------LYPAKEHY-GCVVDLLG 531

Query: 225 RCGQKLDAVKMFDEIT--EPDVVSWSERIAA-ACDGVEAFG 262
           R G+  +A ++  +I   E D V W+  + A A  G E  G
Sbjct: 532 RAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETG 572


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 229/784 (29%), Positives = 388/784 (49%), Gaps = 47/784 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G   + +L   L+  ++K      A       ++R I T+N LI+      
Sbjct: 45  QLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA----- 99

Query: 61  QSGPA--LKLFDRLRYQGL---RPDAFTFSSLVKACGS---------LQENEIVHGVCLK 106
           QS PA    L+ R++ +     RP+  T  +++ A  S           +  IVH     
Sbjct: 100 QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRG 159

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKE 165
                 +++ +  ++ Y K G + SA   F      D + + A +     N E  D++  
Sbjct: 160 SDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALL 219

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +   M   GL  N  S  A+L +  D   +     IH    ++GFL  V   +  A++ +
Sbjct: 220 LVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV--VATALVTM 277

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y RCG   +++ +F+ +   + VSW+  IAA         AF ++  ++   F+ N+ T 
Sbjct: 278 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITF 337

Query: 280 INLLSSV--GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           +  L +      + L     +  +    G    V +G AL++MYG  G ++ AR+ FD +
Sbjct: 338 VTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI 397

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL---EAVSNSKSLK 394
             K+ VSWN+M+  Y +NG   +A+++F  M   SL PN  +  ++L   E VS ++S  
Sbjct: 398 PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARS-- 455

Query: 395 QAMQVHSHIIKSG-FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               +H+ ++ +G F  + S+ + ++  + +  +L E+         K++V  N   + L
Sbjct: 456 ----IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAAL 511

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC-LALKARYDQD 512
                   A+  + T+       +  T   V+  CA +  LE G++I   L+     ++D
Sbjct: 512 SAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERD 571

Query: 513 IFVESAVIDMYCKCGT-IEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           + VESAV++M  KCG+ +++ +R F ++   R  L  WN M+  YAQHG   +   LF  
Sbjct: 572 VVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRI 631

Query: 570 MS-KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ-LEHYACIVDLLGR 627
           M  +  V+PD  T+++VL+ C HAGLV +         ++ G+  Q +EHYAC+VD+LGR
Sbjct: 632 MQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGR 691

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
           +G L  A+  I +MP+P D+ +W SLL AC+ YG+++ G  A    +EL   +   YV+L
Sbjct: 692 MGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVL 751

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKE-PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
           SN+YA+AG W D  ++R++M E+ + K  PG S I V    H F+A D SH QS EIY E
Sbjct: 752 SNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAE 811

Query: 747 LIKL 750
           L +L
Sbjct: 812 LERL 815



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 195/442 (44%), Gaps = 29/442 (6%)

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           +  + +D  I   T+  LL    G+  L  G+Q+     K G      +GN L+ MY KC
Sbjct: 13  RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSL--IPNGYTMA 381
             ++DA + F  L  +   +WN++IA  S         D++  M LE      PN  T+ 
Sbjct: 73  RSLDDANAAFSALRSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNRLTII 129

Query: 382 SILEAVSNSKSL------KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           ++L A+++           QA  VH  I  S    D  + + L+  YGKC  +  +  V 
Sbjct: 130 AVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVF 189

Query: 436 SEIDKKNAVHINALASVLVYASCHA---EALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           S I   + +  N  A+++  A        AL L R +W      N ++F  +L +C   +
Sbjct: 190 SRIQVPDLICWN--AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHS 247

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L   ++IH    +  +  D+ V +A++ MY +CG+++++   F  +   +   WNAM+ 
Sbjct: 248 SLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIA 307

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA-----GLVREARTYLSCMSD 607
            +AQ G       ++ +M + G +P++IT++  L + C +     G       +++C   
Sbjct: 308 AFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACA-- 365

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--L 665
             GL   +     +V + G  G ++ A+   D +P   +   W ++L+A    G     +
Sbjct: 366 --GLEGDVMVGTALVTMYGSTGAIDRARAAFDAIP-AKNIVSWNAMLTAYGDNGRAREAM 422

Query: 666 GLLAGSKLLELQPDNESTYVLL 687
            L A  K   L P+  S   +L
Sbjct: 423 ELFAAMKRQSLAPNKVSYLAVL 444


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 210/689 (30%), Positives = 346/689 (50%), Gaps = 41/689 (5%)

Query: 80  DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           D  T +   KAC G       +HG  +  GF SRV + +  ++ Y K+G    A   F  
Sbjct: 85  DEVTLALSFKACRGEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEG 144

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVF---VEMRSLGLELNEFSLTAVLGASFDVKE- 194
               D V++  ++ G      F+KS +       M   G+  +  + T  L   +D    
Sbjct: 145 LSCPDIVSWNTILSG------FEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYW 198

Query: 195 -------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
                  G Q+H   VK GF  G    + NA++ +Y R G   +A ++F+E+T  D+VSW
Sbjct: 199 DDHGFLFGLQLHSLVVKCGF--GCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSW 256

Query: 248 SERIAA-----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +  ++       C G+EA  LF ++      ++  ++   +S+ G  + L  GKQI    
Sbjct: 257 NAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLA 316

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            K+G+   V++ N LIS Y KC  + DA+++F  +  ++ VSW ++I+   EN      +
Sbjct: 317 QKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEEN-----VV 371

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            +F  M    + PN  T   +L A++    +K+ + VH   +KS    + ++ + LIT Y
Sbjct: 372 SLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMY 431

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV--NGST 480
            K  ++ ESK++  E++ +  +  NAL S         EA   + T   + +E+  N  T
Sbjct: 432 AKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEA---FLTFLSAIKEIKPNQYT 488

Query: 481 FSIVLKACAAMTD--LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           F  VL A AA  D  L+ G+  H   +K   + D FV  A++DMY K G I +++R F +
Sbjct: 489 FGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNE 548

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
               +   W  M+  YA+HG Y  V +L+ ++ + G   D IT+L+VL +CC  G+V   
Sbjct: 549 TPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVG 608

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
                 M   H + P  EHY+ +VD+LGRVG L+ A+  + Q+P  P   + QSLL +C 
Sbjct: 609 HIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCK 668

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++GN+++       L+++ P +   YVL++NLYA  G W  V ++RK M+ + + KE G+
Sbjct: 669 LHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGF 728

Query: 719 SWIHVGG----YTHHFYAGDSSHSQSKEI 743
           SW+ V      + H F +GD SH +S+ I
Sbjct: 729 SWVDVANVDSLHLHGFSSGDKSHPESETI 757



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 265/559 (47%), Gaps = 32/559 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++  G      +S +L+  + K   F  A          DI+++N ++SG   F 
Sbjct: 105 QIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSG---FE 161

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG------------SLQENEIVHGVCLKLG 108
           +S  AL     +   G+  D  T+++ +  C              LQ    +H + +K G
Sbjct: 162 KSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQ----LHSLVVKCG 217

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV-- 166
           F   V++ +  +  Y++ G +  A   F +    D V++ AM+ GY   GE    + V  
Sbjct: 218 FGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLL 277

Query: 167 FVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F  M   G+ L+  SLT  +   G + +++ G+QIHG   K+G+ + V   + N +++ Y
Sbjct: 278 FGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVA--VCNVLISTY 335

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
            +C    DA  +F +++  +VVSW+  I  + D      LF  +R +    N+ T I LL
Sbjct: 336 SKCKVLRDAKAVFQDMSARNVVSWTTLI--SIDEENVVSLFNAMRVDGVYPNDVTFIGLL 393

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
            ++    +++ G  +   C K       ++ N+LI+MY K   + +++ IF+ L ++ ++
Sbjct: 394 HAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTI 453

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHS 401
           SWN++I+GY++NG   +A   F   ++  + PN YT  S+L A++ ++  SLK   + HS
Sbjct: 454 SWNALISGYAQNGLCKEAFLTFLSAIK-EIKPNQYTFGSVLNAIAAAEDISLKHGQRCHS 512

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           H+IK G   D  +   L+  YGK   +NES+RV +E  +K       + S       +  
Sbjct: 513 HLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYES 572

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI-HCLALKARYDQDIFVESAVI 520
            + LY+ I      ++  TF  VL AC     ++ G  I   +  K   +      S ++
Sbjct: 573 VMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMV 632

Query: 521 DMYCKCGTIEDAKRAFRKI 539
           DM  + G +++A+    +I
Sbjct: 633 DMLGRVGRLDEAEELMHQI 651



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 240/508 (47%), Gaps = 38/508 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           Q++SL++K G   +  +   L++ ++++     A R   +   RD++++NA++SG A+  
Sbjct: 208 QLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEG 267

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYL 115
            C    A+ LF  +  +G+  D  + +  + ACG   +L+  + +HG+  KLG+ + V +
Sbjct: 268 ECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAV 327

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV--FVEMRSL 173
            +  I  Y+K   +  A+  F+D    + V++T ++         D+   V  F  MR  
Sbjct: 328 CNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLI-------SIDEENVVSLFNAMRVD 380

Query: 174 GLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+  N+ +   +L A      VKEG  +HG  +K    S    +++N+++ +Y +     
Sbjct: 381 GVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSE--QNVSNSLITMYAKFESIQ 438

Query: 231 DAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSV- 286
           ++ K+F+E+     +SW+  I+  A +G+  EAF  F      + + N+YT  ++L+++ 
Sbjct: 439 ESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLS-AIKEIKPNQYTFGSVLNAIA 497

Query: 287 GGERI-LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
             E I L+ G++  +   K+G      +  AL+ MYGK G +N+++ +F+    K   SW
Sbjct: 498 AAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSW 557

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
             MI+ Y+ +G +   + ++  +       +  T  S+L A       ++ M    HII 
Sbjct: 558 TGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACC-----RKGMVDVGHIIF 612

Query: 406 SGFLLDDSM------ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
              +   S+       S ++   G+   L+E++ ++ +I     + +  L S+L     H
Sbjct: 613 DSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSV--LQSLLGSCKLH 670

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKA 487
                  R +    +   GS+   VL A
Sbjct: 671 GNVEMAERVVDSLIQMDPGSSGPYVLMA 698


>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
          Length = 711

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 182/535 (34%), Positives = 297/535 (55%), Gaps = 6/535 (1%)

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           K+G  IH   +  GF S +  HLN  ++  YV+ G  + A  +FD + E  VVSW+  ++
Sbjct: 168 KQGHLIHTHLITNGFGSDL--HLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVS 225

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                    +AF LF D+R    + N++T  + L +    R L  G Q+Q    K  F+E
Sbjct: 226 GYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVE 285

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + +AL+  + KCG++ DA  +F  ++ +D VSWN+MI GY+  GF + +  MF  ML
Sbjct: 286 NLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 345

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              L+P+ YT+ S+L A +    L  A Q+H  I + G+   D +   LI  Y K  +L 
Sbjct: 346 RGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLR 405

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVNGSTFSIVLKAC 488
            +K +   + KK+     AL +   +   ++ +AL+L++ +      ++      +L  C
Sbjct: 406 SAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC 465

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +     G  IH  ALK +   D+ + +A+IDMY K G IEDAKRAF ++   ++  W 
Sbjct: 466 ANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 525

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ GYA+HG  H   +L+ KM   G KP+++T+L++L +C H GL  E     + M + 
Sbjct: 526 SLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNK 585

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           + + P+ EHY+C+VDL  R GLLE A   + ++ I  +A +W ++L A +IYG + LG  
Sbjct: 586 YNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKE 645

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           A S L  +QP+N   YV+L+++Y++AG+W+D  K+RK M+E+   K  GYS+   
Sbjct: 646 AASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQA 700



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 242/477 (50%), Gaps = 19/477 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I++ LI NG   D  L+T LI  + K  D   A R +FD    R ++++ A++SG ++  
Sbjct: 173 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAA-RNVFDGMPERSVVSWTAMVSGYSQNG 231

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A  LF  +R+ G++ + FT+ S ++AC SL+  ++   V G   K  F   +++ S
Sbjct: 232 RFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKS 291

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ ++K G++  A   F   ++ D V++ AM+ GY   G  D S  +F  M   GL  
Sbjct: 292 ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP 351

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + ++L +VL AS +   +    QIHG   ++G+  G  + +   ++N Y + G    A  
Sbjct: 352 DCYTLGSVLRASAEGGGLIIANQIHGIITQLGY--GSYDIVTGLLINAYAKNGSLRSAKD 409

Query: 235 MFDEITEPDVVSWSERIAA-ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +   + + D+ S +  I   A +G   V+A  LFK++   +  +++  + ++L+      
Sbjct: 410 LRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLA 469

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
               G QI AF  K      V++GNALI MY K G++ DA+  FD +  K+ +SW S+I+
Sbjct: 470 SFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLIS 529

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFL 409
           GY+++G+ + A+ ++  M      PN  T  S+L A S++    +  +  ++++ K    
Sbjct: 530 GYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIK 589

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINAL---ASVLVYASCHAEA 462
                 SC++  + +   L E+  +L +ID K NA    A+   +S+  Y S   EA
Sbjct: 590 PRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEA 646



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 253/525 (48%), Gaps = 36/525 (6%)

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
           ++  ++H   +  GF S ++L +  I  Y K G++++A   F    +   V++TAMV GY
Sbjct: 168 KQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGY 227

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGV 211
             NG F+K+  +F +MR  G++ N+F+  + L A   ++    G Q+ G   K  F+  +
Sbjct: 228 SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENL 287

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLR 268
              + +A+++ + +CG+  DA  +F  + E DVVSW+  I   A  G   ++F +F+ + 
Sbjct: 288 --FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSML 345

Query: 269 FNDFQINEYTMINLL--SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
                 + YT+ ++L  S+ GG  I+    QI     ++G+     +   LI+ Y K G 
Sbjct: 346 RGGLVPDCYTLGSVLRASAEGGGLII--ANQIHGIITQLGYGSYDIVTGLLINAYAKNGS 403

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILE 385
           +  A+ +   ++ KD  S  ++I GY+  G ++  ALD+F  M + ++  +   + S+L 
Sbjct: 404 LRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLN 463

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
             +N  S     Q+H+  +K     D +M + LI  Y K   + ++KR   E+++KN + 
Sbjct: 464 ICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVIS 523

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-----KAI 500
             +L S          A+ LY+ +     + N  TF  +L AC+      +G       +
Sbjct: 524 WTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMV 583

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM-----MGY 554
           +   +K R +      S ++D++ + G +E+A     KI  + + + W A++      GY
Sbjct: 584 NKYNIKPRAEH----YSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGY 639

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDE-ITYLAVLTSCCHAGLVREA 598
              G     SNLFN      ++P+  + Y+ + +    AGL  +A
Sbjct: 640 MSLG-KEAASNLFN------MQPENSVNYVVLASIYSAAGLWDDA 677



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 164/387 (42%), Gaps = 55/387 (14%)

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
           + K+ KQ   +H+H+I +GF  D  + + LI  Y K   +  ++ V   + +++ V   A
Sbjct: 163 DKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTA 222

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           + S         +A  L+  +     + N  T+   L+AC ++  L+ G  +     K R
Sbjct: 223 MVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGR 282

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           + +++FV+SA++D + KCG +EDA   F  +    +  WNAM+ GYA  G   +   +F 
Sbjct: 283 FVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFR 342

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH--YACIVDLL- 625
            M + G+ PD  T  +VL +    G        L   + +HG+I QL +  Y  +  LL 
Sbjct: 343 SMLRGGLVPDCYTLGSVLRASAEGG-------GLIIANQIHGIITQLGYGSYDIVTGLLI 395

Query: 626 ---GRVGLLEGAK-----------------------------------MTIDQMPIPPDA 647
               + G L  AK                                     ++QM I  D 
Sbjct: 396 NAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDD 455

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE-STYVLLSNLYASAGMWNDVGKLRKE 706
            I  S+L+ C    +  LG    +  L+ QP  + +    L ++YA +G   D  +   E
Sbjct: 456 VILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDE 515

Query: 707 MKEKFLCKEPGYSWIH-VGGYTHHFYA 732
           M+EK +      SW   + GY  H Y 
Sbjct: 516 MEEKNVI-----SWTSLISGYAKHGYG 537



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 48/91 (52%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  +K     D  +   LI  + K  +   A R   + + +++I++ +LISG A+  
Sbjct: 476 QIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHG 535

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A+ L+ ++  +G +P+  TF SL+ AC
Sbjct: 536 YGHMAVSLYKKMESKGFKPNDVTFLSLLFAC 566


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 191/582 (32%), Positives = 303/582 (52%), Gaps = 51/582 (8%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG-------QKLDAVKMFDEITEPD 243
           D++ GE +HG  +++G   G   +  NA+MN+Y +         Q+    KM   I EP 
Sbjct: 25  DLRFGESVHGCIIRLGM--GFDLYTCNALMNMYSKFWSLEEGGVQRFCDSKMLGGIPEPR 82

Query: 244 VV-----------SWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
            +              ER+A    G++  G    +    +Q+N Y           +++ 
Sbjct: 83  EIGKCSNSHDLPCELDERVA----GIDQNGDLNQMSNILYQVNTY-----------KKVF 127

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             GK    +  K    E   +G+               R +F+ +  +D VSWN++I+G 
Sbjct: 128 DEGKTSDVYSKKEK--ESYYLGSL--------------RKVFEMMPKRDIVSWNTVISGN 171

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           ++NG    AL M   M    L P+ +T++S+L   +   +L +  ++H + I++G+  D 
Sbjct: 172 AQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADV 231

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + S LI  Y KC  +++S RV   + + + +  N++ +  V      E L+ ++ +  +
Sbjct: 232 FIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIA 291

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             + N  +FS ++ ACA +T L  GK +H   +++R+D ++F+ SA++DMY KCG I  A
Sbjct: 292 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTA 351

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +  F K+    +  W AM+MGYA HG  ++  +LF +M   GVKP+ + ++AVLT+C HA
Sbjct: 352 RWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHA 411

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GLV EA  Y + M+  + +IP LEHYA + DLLGRVG LE A   I  M I P   +W +
Sbjct: 412 GLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWST 471

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL+AC ++ NI+L      KL  + P N   YVLLSN+Y++AG W D  KLR  M++K +
Sbjct: 472 LLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGM 531

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K+P  SWI +    H F AGD SH     I + L  L E M
Sbjct: 532 KKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQM 573



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 159/335 (47%), Gaps = 16/335 (4%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSL 87
               R+ F  +     RDI+++N +ISG A+      AL +   +    LRPD+FT SS+
Sbjct: 146 LGSLRKVFEMM---PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV 202

Query: 88  VKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           +       +L + + +HG  ++ G+ + V++ S  I+ YAK   +  +   F      D 
Sbjct: 203 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDG 262

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGF 201
           +++ +++ G V NG FD+  + F +M    ++ N  S ++++ A   +     G+Q+HG+
Sbjct: 263 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGY 322

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGV 258
            ++  F   V   + +A++++Y +CG    A  +FD++   D+VSW+  I   A      
Sbjct: 323 IIRSRFDGNV--FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 380

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL-RAGKQIQAFCYKVGFMEVVSIGNAL 317
           +A  LFK +     + N    + +L++     ++  A K   +       +  +    A+
Sbjct: 381 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV 440

Query: 318 ISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIAG 351
             + G+ G++ +A   I D  I      W++++A 
Sbjct: 441 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 475



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+   I+NG+  D  + ++LI  + K      + R  +     D I++N++I+G  +  
Sbjct: 217 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 276

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                LK F ++    ++P+  +FSS++ AC    +L   + +HG  ++  F   V++ S
Sbjct: 277 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 336

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G I +A   F      D V++TAM+ GY  +G    +  +F  M   G++ 
Sbjct: 337 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 396

Query: 178 NEFSLTAVLGA 188
           N  +  AVL A
Sbjct: 397 NYVAFMAVLTA 407



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 42/210 (20%), Positives = 93/210 (44%), Gaps = 33/210 (15%)

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           + F  VLK+C  M DL  G+++H   ++     D++  +A+++MY K  ++E+     ++
Sbjct: 11  NVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG--GVQR 68

Query: 539 ICRDSLAG--------------------WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
            C   + G                     +  + G  Q+G  +++SN+  +++ +    D
Sbjct: 69  FCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFD 128

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE--HYACIVDLLGRVGLLEGAKM 636
           E       TS  ++   +E+  YL  +  +  ++P+ +   +  ++    + G+ E A M
Sbjct: 129 EGK-----TSDVYSKKEKES-YYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 182

Query: 637 TIDQM---PIPPDAHIWQSLLSACTIYGNI 663
            + +M    + PD+    S+L     Y N+
Sbjct: 183 MVREMGNADLRPDSFTLSSVLPIFAEYVNL 212


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 202/669 (30%), Positives = 331/669 (49%), Gaps = 6/669 (0%)

Query: 89  KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
           KAC      E  H   ++ G+   +  V+   +     G    A   F      D   + 
Sbjct: 17  KACTFPHLAE-THAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFN 75

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFL 208
            ++ G+ ++ +          +++  L  + F+    + AS D   G  +H   V  GF 
Sbjct: 76  VLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGFD 135

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA---CDGVEAFGLFK 265
           S +   + +A+++LY +  +   A K+FD++ + D V W+  I      C   ++  +FK
Sbjct: 136 SNL--FVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFK 193

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           D+     +++  T+  +L +V   + ++ G  IQ    K+GF     +   LIS++ KC 
Sbjct: 194 DMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCE 253

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            V+ AR +F  +   D VS+N++I+G+S NG    A+  F  +L      +  TM  ++ 
Sbjct: 254 DVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIP 313

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
             S    L  A  +    +KSG +L  S+ + L T Y + N ++ ++++  E  +K    
Sbjct: 314 VSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAA 373

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            NA+ S    +     A+ L++ +  +    N  T + +L ACA +  L  GK++H L  
Sbjct: 374 WNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIK 433

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
               +Q+I+V +A+IDMY KCG I +A + F      +   WN M+ GY  HG   E   
Sbjct: 434 SKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALK 493

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LFN+M   G +P  +T+L+VL +C HAGLVRE       M + + + P  EHYAC+VD+L
Sbjct: 494 LFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDIL 553

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
           GR G LE A   I +MP+ P   +W +LL AC I+ + +L  +A  +L EL P N   YV
Sbjct: 554 GRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYV 613

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           LLSN+Y+    +     +R+ +K++ L K PG + I V G  H F  GD SHSQ+  IY 
Sbjct: 614 LLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYA 673

Query: 746 ELIKLYEHM 754
           +L +L   M
Sbjct: 674 KLEELTGKM 682



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 275/599 (45%), Gaps = 18/599 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           + ++ LI+NG+  D    T L          R A    F     DI  +N LI G + F 
Sbjct: 26  ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFS-FS 84

Query: 61  QSGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
               ++  +  L +   L PD FT++  + A         +H   +  GF S +++ S  
Sbjct: 85  PDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGFDSNLFVASAL 144

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ Y K   +  A   F    D D V +  M+ G V N  +D S +VF +M + G+ L+ 
Sbjct: 145 VDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDS 204

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++  VL A  +++E   G  I    +K+GF     +++   +++++ +C     A  +F
Sbjct: 205 TTVATVLPAVAEMQEVKVGMGIQCLALKLGF--HFDDYVLTGLISVFSKCEDVDTARLLF 262

Query: 237 DEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             I +PD+VS++  I+  +C+G    A   F++L  +  +++  TM+ L+        L 
Sbjct: 263 GMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 322

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
               IQ FC K G +   S+  AL ++Y +  +++ AR +FD    K   +WN+MI+GY+
Sbjct: 323 LACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYA 382

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           ++G    A+ +F  M+     PN  T+ SIL A +   +L     VH  +IKS  L  + 
Sbjct: 383 QSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVH-QLIKSKNLEQNI 441

Query: 414 MIS-CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            +S  LI  Y KC  ++E+ ++     +KN V  N +           EAL+L+  +   
Sbjct: 442 YVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHL 501

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAI-HCLALKARYDQDIFVESAVIDMYCKCGTIED 531
             + +  TF  VL AC+    + +G  I H +  K R +      + ++D+  + G +E 
Sbjct: 502 GFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEK 561

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLAVLTS 588
           A    RK+  +        ++G       H+ +NL    S+  F + P  + Y  +L++
Sbjct: 562 ALEFIRKMPVEPGPAVWGTLLGACM---IHKDTNLARVASERLFELDPGNVGYYVLLSN 617


>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 175/497 (35%), Positives = 262/497 (52%), Gaps = 32/497 (6%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           R L  G ++ A     GF+  V I N ++ MY KC  + +A+ +FD +  +D  SWN MI
Sbjct: 103 RALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMI 162

Query: 350 AGYSENGFFNQALDMFCHMLE---FSLIP-----------------------------NG 377
           +GY++ G   +A  +F  M E   FS                                N 
Sbjct: 163 SGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNK 222

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           +TM+S L A +  +SL    ++H HI++ G  LD  + S L   YGKC ++ E++ +  +
Sbjct: 223 FTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDK 282

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
              ++ V   A+           E   L+  +  S    N  TFS VL ACA     E G
Sbjct: 283 TVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELG 342

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K +H    +  +D   F  S ++ MY KCG I++A+R F  + R  L  W +++ GYAQ+
Sbjct: 343 KQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQN 402

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   E    F  + K G +PD IT++ VL++C HAGLV +   Y   + + HGL    +H
Sbjct: 403 GQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADH 462

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC++DLL R G L+ A+  ID+MPI PD  +W SLL  C I+GN+ L   A   L E++
Sbjct: 463 YACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIE 522

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P+N +TY  L+N+YA+AG+W  V ++RK M  + + K+PG SWI +    H F  GD+SH
Sbjct: 523 PENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSH 582

Query: 738 SQSKEIYKELIKLYEHM 754
           ++SKEI++ L KL + M
Sbjct: 583 AKSKEIHEFLGKLSKRM 599



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 46/404 (11%)

Query: 78  RPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA-- 132
           RP A T+S+L++ C    +L E   VH      GF   V + +  ++ Y K   +V+A  
Sbjct: 86  RPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKR 145

Query: 133 ---EMCFRDC--------------------------LDLDNVAYTAMVCGYVWNGEFDKS 163
              EM  RD                            + DN ++TAM  GYV + + +++
Sbjct: 146 LFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEA 205

Query: 164 KEVFVEM-RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNA 218
            E+F  M R    + N+F++++ L AS  ++    G++IHG  +++G  L GV   + +A
Sbjct: 206 LELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGV---VWSA 262

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQIN 275
           + ++Y +CG   +A  +FD+  + DVVSW+   +R        E F LF DL  +    N
Sbjct: 263 LSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPN 322

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           E+T   +L++         GKQ+  +  ++GF       + L+ MY KCG + +AR +F+
Sbjct: 323 EFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFN 382

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +   D VSW S+I+GY++NG  ++AL  F  +L+    P+  T   +L A +++  + +
Sbjct: 383 GMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDK 442

Query: 396 AMQVHSHII-KSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            ++    I  K G        +CLI    +   L E++ ++ ++
Sbjct: 443 GLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKM 486



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 53/411 (12%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           + EG ++H      GF+ GV   ++N I+++Y++C   ++A ++FDE+ E D+ SW+  I
Sbjct: 105 LDEGMKVHAHTKTSGFVPGVV--ISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMI 162

Query: 252 A---------------------------AACDGV-------EAFGLFKDL-RFNDFQINE 276
           +                           A   G        EA  LF+ + R  +F+ N+
Sbjct: 163 SGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNK 222

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +TM + L++    + L  GK+I     ++G      + +AL  MYGKCG + +AR IFD 
Sbjct: 223 FTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDK 282

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
            + +D VSW +MI  Y + G   +   +F  +L+  + PN +T + +L A ++  + +  
Sbjct: 283 TVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELG 342

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            QVH ++ + GF       S L+  Y KC  +  ++RV + + + + V   +L S     
Sbjct: 343 KQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQN 402

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-------KAIHCLALKARY 509
               EAL+ +  +  S  + +  TF  VL AC     +++G       K  H L   A +
Sbjct: 403 GQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADH 462

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRK--ICRDSLAGWNAMMMGYAQHG 558
                  + +ID+  + G +++A+    K  I  D    W +++ G   HG
Sbjct: 463 ------YACLIDLLSRSGRLQEAEDIIDKMPIEPDKFL-WASLLGGCRIHG 506



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 187/425 (44%), Gaps = 54/425 (12%)

Query: 303 YKVG-FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
           YKVG  +++ S   A+ S      Q   ++       FK     + ++    ++  F +A
Sbjct: 7   YKVGKILKLFSPRRAICSS-STTSQPQLSKPPIHNTFFKSGAK-DELVKRLCKDNNFKEA 64

Query: 362 LDMFC---------HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +D+ C          +L+    P+  T +++L+     ++L + M+VH+H   SGF+   
Sbjct: 65  IDILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGV 124

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN------------------------- 447
            + + ++  Y KCN+L  +KR+  E+ +++    N                         
Sbjct: 125 VISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTER 184

Query: 448 ------ALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAI 500
                 A+ S  V    H EALEL+R +      + N  T S  L A AA+  L  GK I
Sbjct: 185 DNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEI 244

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H   L+   D D  V SA+ DMY KCG+I +A+  F K     +  W AM+  Y + G  
Sbjct: 245 HGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRR 304

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCC-HAG--LVREARTYLSCMSDLHGLIPQLEH 617
            E   LF+ + K G+ P+E T+  VL +C  HA   L ++   Y++ +    G  P    
Sbjct: 305 EEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRI----GFDPSSFA 360

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE-- 675
            + +V +  + G ++ A+   + MP  PD   W SL+S     G  D  L     LL+  
Sbjct: 361 ASTLVHMYTKCGNIKNARRVFNGMP-RPDLVSWTSLISGYAQNGQPDEALQFFELLLKSG 419

Query: 676 LQPDN 680
            QPD+
Sbjct: 420 TQPDH 424



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 165/343 (48%), Gaps = 14/343 (4%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL-RYQGLRP 79
           +IS + K    + A +       RD  ++ A+ SG  R  Q   AL+LF  + R++  + 
Sbjct: 161 MISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKC 220

Query: 80  DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           + FT SS + A  ++Q     + +HG  L++G      + S   + Y K G I  A   F
Sbjct: 221 NKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIF 280

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VK 193
              +D D V++TAM+  Y   G  ++   +F ++   G+  NEF+ + VL A  D    +
Sbjct: 281 DKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEE 340

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+Q+HG+  ++GF     +   + ++++Y +CG   +A ++F+ +  PD+VSW+  I+ 
Sbjct: 341 LGKQVHGYMTRIGF--DPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISG 398

Query: 254 -ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFME 309
            A +G   EA   F+ L  +  Q +  T + +LS+     ++  G +   +   K G   
Sbjct: 399 YAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTH 458

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
                  LI +  + G++ +A  I D + I  D   W S++ G
Sbjct: 459 TADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGG 501



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 12/257 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I+  +++ G  LD ++ + L   + K      A R +FD T +RD++++ A+I    + 
Sbjct: 243 EIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEA-RHIFDKTVDRDVVSWTAMIDRYFKE 301

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +      LF  L   G+ P+ FTFS ++ AC      E+   VHG   ++GF    +  
Sbjct: 302 GRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAA 361

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y K G I +A   F      D V++T+++ GY  NG+ D++ + F  +   G +
Sbjct: 362 STLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQ 421

Query: 177 LNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            +  +   VL A      V +G E       K G L+   +H    +++L  R G+  +A
Sbjct: 422 PDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHG-LTHTADHY-ACLIDLLSRSGRLQEA 479

Query: 233 VKMFDEIT-EPDVVSWS 248
             + D++  EPD   W+
Sbjct: 480 EDIIDKMPIEPDKFLWA 496


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 219/741 (29%), Positives = 373/741 (50%), Gaps = 25/741 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA-FRFLFD-TQNRDIITYNALISGLARF 59
           I+ + IK+G  +D  L   LI+ + K  D   +    LF+  + +D++++N+++ G    
Sbjct: 220 IHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYN 279

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF--SSRVY 114
                +L  F R+ +   R D  + S  + AC SL E    E +HG  +KLG+  +S V 
Sbjct: 280 GDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVS 339

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y++   +  AE  FR+    D V++ AM+ GY  N    ++ ++ VEM++ G
Sbjct: 340 VANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTG 399

Query: 175 -LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQ 228
             + +  +LT +L    ++   +EG  IHG+ ++      V +HL   N ++++Y +C  
Sbjct: 400 CFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHM---VPDHLPLRNGLIDMYSKCNV 456

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSS 285
              A  +F    + D+VSW+  I+         +A  LFK+L       +  T+  +LSS
Sbjct: 457 VEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSS 516

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVS 344
                 L  GK +  +  K GF+    + N+L+ MY   G +    SI  +     D  S
Sbjct: 517 CNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIAS 576

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLE-FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           WN++I G      F +AL+ F  M +  S   +  T+ ++L AV+N + L Q   +HS  
Sbjct: 577 WNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLA 636

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +KS F  D  + + LIT Y +C  +N +++V       N    N + S L +     EAL
Sbjct: 637 LKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREAL 696

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
           EL+R +     E    T   VL AC  +  L  GK +H    +  Y Q+ F+ +A++D+Y
Sbjct: 697 ELFRHLQFKPNEF---TIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLY 753

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
             CG +++A + FR   + S + WN+M+  Y  HG   +   LF++M   G+K  + T++
Sbjct: 754 STCGRLDNAVKVFRH-SQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFV 812

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L++C H+GLV +   Y  CM + +G+ P+ EH   +V++L R G ++ A      +  
Sbjct: 813 SLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQS 872

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
              + +W  LLS C  +G ++LG     KL E++P N   Y+ L+N+Y +AG W D   L
Sbjct: 873 NASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDL 932

Query: 704 RKEMKEKFLCKEPGYSWIHVG 724
           R+ + ++ L K  GYS I VG
Sbjct: 933 RQYIHDQGLRKCAGYSLIDVG 953



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 198/736 (26%), Positives = 342/736 (46%), Gaps = 50/736 (6%)

Query: 18  STTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           ST+L + ++K  DF  + R LF+   NRD+I +NA+IS          A++ F ++    
Sbjct: 135 STSLFTLYSKAGDFTSS-RVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQ 193

Query: 77  LRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS-- 131
            R D+ T   +V     L+   +  ++H V +K G    + L +  I  YAK G++ S  
Sbjct: 194 TRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSD 253

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           +E  F +    D V++ +++ G ++NG+ +KS   F  M       +  SL+  + A   
Sbjct: 254 SECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSS 313

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           + E   GE IHG G+K+G+       + N++++LY +C     A  +F E+   D+VSW+
Sbjct: 314 LGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWN 373

Query: 249 ---ERIAAACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
              E  A+  +  EAF L  +++    FQ +  T+  +L       + R G+ I  +  +
Sbjct: 374 AMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIR 433

Query: 305 VGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
              + + + + N LI MY KC  V  A  +F      D VSWN+MI+GYS+N ++ +A +
Sbjct: 434 RHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQN 493

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  +L      +  T+ +IL + +++ SL     VH   +KSGFL    +++ L+  Y 
Sbjct: 494 LFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYI 553

Query: 424 KCNALNESKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGSTF 481
               L     +L E     +    N +    V      EALE +  +  G     +  T 
Sbjct: 554 NSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITL 613

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             VL A A +  L QGK++H LALK+ +  D  V++++I MY +C  I  A++ F+    
Sbjct: 614 VNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSI 673

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            +L  WN M+   + +    E   LF  +     KP+E T ++VL++C   G++   +  
Sbjct: 674 SNLCTWNCMISALSHNKESREALELFRHLQ---FKPNEFTIVSVLSACTRIGVLIHGK-- 728

Query: 602 LSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
                 +HG   +  +       A +VDL    G L+ A            A  W S+++
Sbjct: 729 -----QVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQKSESA--WNSMIA 781

Query: 656 ACTIYGNIDLGLLAGSKLLELQPD--------NESTYVLLSNLYASAGMWNDVGKLRKEM 707
           A   +GN       G K +EL  +         +ST+V L +  + +G+ N   +  + M
Sbjct: 782 AYGNHGN-------GEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECM 834

Query: 708 KEKFLCKEPGYSWIHV 723
            EK+  K      ++V
Sbjct: 835 LEKYGIKPEAEHQVYV 850



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 132/560 (23%), Positives = 260/560 (46%), Gaps = 30/560 (5%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACG-SLQENEI-----VHGVCLKLGFSSRVYLVSG 118
           A+ LFD++  +        F  +V     SL++  I     VH   LK G  + +   + 
Sbjct: 78  AINLFDKMPQRNFHVREVHFDLVVDCIKLSLEKPNIFTATVVHCAALKTGALAYLPTSTS 137

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y+K+G+  S+ + F    + D +A+ A++   + N  +  + E F +M       +
Sbjct: 138 LFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRFD 197

Query: 179 EFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLDAV 233
             +L  V+     +K   +G  IH   +K G L  +   L NA++N+Y +CG     D+ 
Sbjct: 198 STTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDI--SLCNALINMYAKCGDVNSSDSE 255

Query: 234 KMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            +F+E+   DVVSW+  I   C    D  ++   F+ + F++ + +  ++   +S+    
Sbjct: 256 CLFEEMEYKDVVSWNS-IMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSL 314

Query: 290 RILRAGKQIQAFCYKVGFME--VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             L  G+ I     K+G+ +   VS+ N+LIS+Y +C  V+ A ++F  + +KD VSWN+
Sbjct: 315 GELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNA 374

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           M+ GY+ N   ++A D+   M       P+  T+ ++L   +     ++   +H + I+ 
Sbjct: 375 MMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR 434

Query: 407 GFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             + D   + + LI  Y KCN + +++ +     + + V  NA+ S       + +A  L
Sbjct: 435 HMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNL 494

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           ++ +    +  + ST   +L +C +   L  GK++H   LK+ +     + ++++ MY  
Sbjct: 495 FKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYIN 554

Query: 526 CGTIEDAKRAFRKICRDS----LAGWNAMMMGYAQHGCYHEVSNLFNKMSK-FGVKPDEI 580
            G   D    F  +  +S    +A WN +++G  +   + E    F  M +      D I
Sbjct: 555 SG---DLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSI 611

Query: 581 TYLAVLTSCCHAGLVREART 600
           T + VL++  +  L+ + ++
Sbjct: 612 TLVNVLSAVANIELLNQGKS 631



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 176/358 (49%), Gaps = 6/358 (1%)

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K G +  +    +L ++Y K G    +R +F+++  +D ++WN++I+   EN  +  A++
Sbjct: 125 KTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVE 184

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            F  M++     +  T+  ++  +S+ K+  Q   +H   IKSG L+D S+ + LI  Y 
Sbjct: 185 FFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYA 244

Query: 424 KCNALN--ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           KC  +N  +S+ +  E++ K+ V  N++    +Y     ++L  +R +  S    +  + 
Sbjct: 245 KCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSL 304

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA--VIDMYCKCGTIEDAKRAFRKI 539
           S  + AC+++ +L  G+ IH   +K  Y  + FV  A  +I +Y +C  ++ A+  FR++
Sbjct: 305 SCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREM 364

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREA 598
               +  WNAMM GYA +   HE  +L  +M   G  +PD +T   +L  C    L RE 
Sbjct: 365 AYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREG 424

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           RT        H +   L     ++D+  +  ++E A++         D   W +++S 
Sbjct: 425 RTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTA-QIDLVSWNAMISG 481



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 4/196 (2%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           REV+       +K      ++     +HC ALK      +   +++  +Y K G    ++
Sbjct: 93  REVHFDLVVDCIKLSLEKPNIFTATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSR 152

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             F  I    +  WNA++    ++ CY      F KM K   + D  T L V+++  H  
Sbjct: 153 VLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLK 212

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG--AKMTIDQMPIPPDAHIWQ 651
              + R  + C+S   G++  +     ++++  + G +    ++   ++M    D   W 
Sbjct: 213 NFGQGRV-IHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEY-KDVVSWN 270

Query: 652 SLLSACTIYGNIDLGL 667
           S++  C   G+++  L
Sbjct: 271 SIMRGCLYNGDLEKSL 286


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 185/580 (31%), Positives = 294/580 (50%), Gaps = 39/580 (6%)

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRF- 269
           HL    + +Y   G    A  +FD+I +PD+ +W+  I+A       +EA   + D R  
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           N  + ++  ++++  +    R +   K++     + GF   V +GNALI MYGKC     
Sbjct: 72  NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           AR +F+ + F+D +SW SM + Y   G   +AL  F  M      PN  T++SIL A ++
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
            K LK   +VH  ++++G   +  + S L+  Y  C ++ +++ V   + +++ V  N L
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251

Query: 450 ASV-----------------------LVYASCHA------------EALELYRTIWGSCR 474
            +                        L YAS +A            +ALE+   +  S  
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + N  T + VL AC  +  L  GK IH    +  + QD+   +A++ MY KCG +E ++R
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRR 371

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  + +     WN M++  + HG   E   LF +M   GV+P+ +T+  VL+ C H+ L
Sbjct: 372 VFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRL 431

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E       MS  H + P  +H++C+VD+L R G LE A   I +MPI P A  W +LL
Sbjct: 432 VDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALL 491

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
             C +Y N++LG +A ++L E++ DN   YVLLSN+  SA +W++  + RK M+++ + K
Sbjct: 492 GGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTK 551

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            PG SWI V    H F  GD S+ QS EIY+ L  + E M
Sbjct: 552 NPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKM 591



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 213/456 (46%), Gaps = 60/456 (13%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSG 63
           +L K    L P L+   I  ++   D +RA R LFD     D+ T+  LIS L +  +S 
Sbjct: 1   MLSKLPTSLPPHLALKFIKVYSNSGDLQRA-RHLFDKIPQPDLPTWTILISALTKHGRSL 59

Query: 64  PALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGF 119
            A++ ++  R++  + PD     S+ KAC SL++    + VH   ++ GF S V L +  
Sbjct: 60  EAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNAL 119

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I+ Y K      A + F      D +++T+M   YV  G   ++   F +M   G   N 
Sbjct: 120 IDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNS 179

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +++++L A  D+K+   G ++HGF V+ G    V   +++A++N+Y  C     A  +F
Sbjct: 180 VTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNV--FVSSALVNMYASCLSIRQAQLVF 237

Query: 237 DEITEPDVVSWSERIAA-----ACD-GVEAFG---------------------------- 262
           D ++  D VSW+  I A      C+ G+  FG                            
Sbjct: 238 DSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTE 297

Query: 263 ----LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
               +   ++ + F+ N+ T+ ++L +      LR GKQI  + ++  F + ++   AL+
Sbjct: 298 KALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALV 357

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY KCG +  +R +F  +  +D+VSWN+MI   S +G   +AL +F  M++  + PN  
Sbjct: 358 FMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSV 417

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           T   +L   S           HS ++  G L+ DSM
Sbjct: 418 TFTGVLSGCS-----------HSRLVDEGLLIFDSM 442



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 145/345 (42%), Gaps = 58/345 (16%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALIS----- 54
           +++   I+ G   D +L   LI  + K        R +F+    RD+I++ ++ S     
Sbjct: 99  RVHEDAIRFGFCSDVLLGNALIDMYGK-CRCSEGARLVFEGMPFRDVISWTSMASCYVNC 157

Query: 55  GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSS 111
           GL R      AL  F ++   G RP++ T SS++ AC  L++      VHG  ++ G   
Sbjct: 158 GLLR-----EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGG 212

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            V++ S  +  YA    I  A++ F      D V++  ++  Y  N E +K   VF  M 
Sbjct: 213 NVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMM 272

Query: 172 SLGLELNEFSLTAVLGASFD--------------------------------------VK 193
           S G+ LN  S  AV+G                                          ++
Sbjct: 273 SEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLR 332

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+QIHG+  +  F   +      A++ +Y +CG    + ++F  +T+ D VSW+  I A
Sbjct: 333 GGKQIHGYIFRHWFFQDLTT--TTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIA 390

Query: 254 AC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
                +G EA  LF+++  +  + N  T   +LS     R++  G
Sbjct: 391 TSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEG 435


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 220/711 (30%), Positives = 353/711 (49%), Gaps = 77/711 (10%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFI---ENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
           G +++   +H    K G SS  Y+    +    NY KS E   A+   +D    D V + 
Sbjct: 35  GLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAE---ADQISKDFDGFDLVVHN 91

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFL 208
            M+   V  G  D+++++F EM     + NE S TA++          +   +  +  F 
Sbjct: 92  CMISANVQRGNLDEARKLFDEMP----QTNEISWTALISGFMKYGRVRESMWYFERNPFQ 147

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE----PDVVSWSERIAAACDGVEAFGLF 264
           + V      A ++ YV+ G  ++A+K+F ++ E    P+ V+++  +  AC  +  FGL 
Sbjct: 148 NVVSW---TAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTS-VVRACANLGDFGL- 202

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM-------------EVV 311
                        +++ L+   G E  L     +   C ++G +             +VV
Sbjct: 203 -----------GMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVV 251

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
           S   A++ +Y +  ++ +AR IFD +  ++ VSW++MIA Y ++G+  ++L +FC M++ 
Sbjct: 252 S-WTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQE 310

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
              PN    +SIL A+++ ++L+  M +H H+ K GF  D  + S LI  Y KC    + 
Sbjct: 311 GFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDG 370

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI-------WGS-------CREV- 476
           + +   I +KN V  NA+           EA  L+  +       W +       C +  
Sbjct: 371 RFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFD 430

Query: 477 ----------------NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
                           N STFS +L ACA+   L++GK +H   +K     D +V +A+ 
Sbjct: 431 EMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALT 490

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDE 579
           DMY K G IE +K+ F ++ + +   W AM+ G A+ G   E   LF +M K   + P+E
Sbjct: 491 DMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNE 550

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           + +LAVL +C H+GLV +   Y + M  ++GL P+  H+ C+VD+L R G L  A+  I 
Sbjct: 551 VMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIY 610

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            MP  P+ + W +LLS C  Y N +L      KL E+   N + YVLLSN+YASAG W D
Sbjct: 611 SMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRD 670

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           V K+RK MK K L K  G SW+ +    H FY+ D +HSQS EIY E+++L
Sbjct: 671 VLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIY-EILEL 720



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 153/627 (24%), Positives = 267/627 (42%), Gaps = 117/627 (18%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ L K G   +  +S  L+  +  +     A +   D    D++ +N +IS   +   
Sbjct: 43  LHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQRGN 102

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              A KLFD +                      Q NEI           S   L+SGF+ 
Sbjct: 103 LDEARKLFDEMP---------------------QTNEI-----------SWTALISGFM- 129

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
              K G +  +   F      + V++TA + GYV NG   ++ ++F+++    ++ N+ +
Sbjct: 130 ---KYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVT 186

Query: 182 LTAVLGASFDVKE---GEQIHGFGVKVGF---------LSGVCNHLN------------- 216
            T+V+ A  ++ +   G  + G  VK G+         L  +C  +              
Sbjct: 187 FTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRME 246

Query: 217 -------NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKD 266
                   AI++LYV   +  +A ++FDE+ + + VSWS  IA  C      E+  LF  
Sbjct: 247 EKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCR 306

Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           +    F+ N     ++LS++     L+AG  I     K+GF + V + ++LI MY KCG+
Sbjct: 307 MIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGE 366

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGF----------------------------- 357
             D R +FD ++ K+ VSWN+M+ GYS NG                              
Sbjct: 367 TKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDC 426

Query: 358 --FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             F++  ++F  M+    IPN  T +S+L A +++ SL +   +H  I+K G   D  + 
Sbjct: 427 EQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVG 486

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCR 474
           + L   Y K   +  SK+V + + KKN V   A+   L  +    E+L L+  +   S  
Sbjct: 487 TALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSI 546

Query: 475 EVNGSTFSIVLKACAAMTDLEQG-------KAIHCLALKARYDQDIFVESAVIDMYCKCG 527
             N   F  VL AC+    +++G       +A++ L  K R+       + V+DM  + G
Sbjct: 547 APNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHF------TCVVDMLSRAG 600

Query: 528 TIEDAKR-AFRKICRDSLAGWNAMMMG 553
            + +A+   +    +     W A++ G
Sbjct: 601 RLFEAEEFIYSMPFQPETNAWAALLSG 627


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 191/577 (33%), Positives = 300/577 (51%), Gaps = 41/577 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA------AACDGVEAFGL-FKDLRF 269
           N I+++Y + G      ++F+ +   D VSW+  I+      +  D V  + L  KD   
Sbjct: 75  NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           N  +I   TM+ L S     R +  G+QI     K GF   V +G+ L+ MY K G + D
Sbjct: 135 NLNRITFSTMLILCSKF---RCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYD 191

Query: 330 ARSIFDYL--------------------------IF-----KDSVSWNSMIAGYSENGFF 358
           A+  FD +                          +F     +DS+SW  MI G  +NG  
Sbjct: 192 AKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLE 251

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +ALDMF  M       + +T  S+L A  +  +L +  Q+H+++I++    +  + S L
Sbjct: 252 REALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSAL 311

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC ++  ++ V   + +KN +   A+           EA++++  +  +  E + 
Sbjct: 312 VDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDD 371

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   V+ +CA +  LE+G   HC AL +     I V +A+I +Y KCG+ E++ R F +
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTE 431

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +       W A++ GYAQ G  +E   LF +M   G+KPD +T++ VL++C  AGLV + 
Sbjct: 432 MNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKG 491

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             Y   M   HG++P ++H  CI+DLLGR G LE A+  I+ MP  PD   W +LLS+C 
Sbjct: 492 LQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCR 551

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++G++++G  A   L+ L+P N ++YVLLS+LYAS G W+ V +LR+ M++K + KEPGY
Sbjct: 552 VHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGY 611

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           SWI   G  H F A D S     +IY EL KL   M+
Sbjct: 612 SWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMI 648



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 241/521 (46%), Gaps = 43/521 (8%)

Query: 78  RPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
           +P+ F  ++L+ A   L      H V   +     ++  +  +  Y+K G +   +  F 
Sbjct: 37  QPETFLSNNLITAYYKLGNLAYAHHVFDHIP-QPNLFSWNTILSVYSKLGLLSQMQQIFN 95

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRSLGLELNE--FSLTAVLGASFD-VK 193
                D V++   + GY   G    +  V+ + ++   + LN   FS   +L + F  V 
Sbjct: 96  LMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVD 155

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV-------- 245
            G QI+G  +K GF S V   + + ++++Y + G   DA + FDE+ E +VV        
Sbjct: 156 LGRQINGQILKFGFGSDV--FVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITG 213

Query: 246 -----------------------SWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTM 279
                                  SW+  I     +G+E  A  +F+++R   F ++++T 
Sbjct: 214 LMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTF 273

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            ++L++ G    L  GKQI A+  +    + V +G+AL+ MY KC  +  A ++F  +  
Sbjct: 274 GSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQ 333

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+ +SW +M+ GY +NGF  +A+ +F  M    + P+ +T+ S++ + +N  SL++  Q 
Sbjct: 334 KNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQF 393

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H   + SG +   ++ + LIT YGKC +   S R+ +E++ ++ V   AL +        
Sbjct: 394 HCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKA 453

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-SA 518
            E + L+  +     + +G TF  VL AC+    +E+G       +K      I    + 
Sbjct: 454 NETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTC 513

Query: 519 VIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           +ID+  + G +E+A+     + C   + GW  ++     HG
Sbjct: 514 IIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 178/346 (51%), Gaps = 13/346 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  T+I+   +      + R     + RD I++  +I+GL +      AL +F  +R  
Sbjct: 205 VMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLA 264

Query: 76  GLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G   D FTF S++ ACGS   L E + +H   ++      V++ S  ++ Y+K   I SA
Sbjct: 265 GFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSA 324

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
           E  F+     + +++TAM+ GY  NG  +++ ++F EM+  G+E ++F+L +V+ +  + 
Sbjct: 325 ETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANL 384

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++EG Q H   +  G +S +   ++NA++ LY +CG   ++ ++F E+   D VSW+ 
Sbjct: 385 ASLEEGAQFHCRALVSGLISFIT--VSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTA 442

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKV 305
            +A         E  GLF+ +  +  + +  T I +LS+     ++  G Q  ++   + 
Sbjct: 443 LLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEH 502

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIA 350
           G M +V     +I + G+ G++ +AR+  + +    D V W ++++
Sbjct: 503 GIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I+  H  +  + + L+  ++K    + A         +++I++ A++ G  +  
Sbjct: 291 QIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNG 350

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S  A+K+F  ++  G+ PD FT  S++ +C    SL+E    H   L  G  S + + +
Sbjct: 351 FSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN 410

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y K G   ++   F +    D V++TA++ GY   G+ +++  +F  M + GL+ 
Sbjct: 411 ALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKP 470

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +   VL A      V++G Q     +K   +  + +H    I++L  R G+  +A  
Sbjct: 471 DGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHC-TCIIDLLGRAGRLEEARN 529

Query: 235 MFDEIT-EPDVVSWSERIAA 253
             + +   PDVV W+  +++
Sbjct: 530 FINNMPCHPDVVGWATLLSS 549



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 53/324 (16%)

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            QA  + C +L+    P  +   +++ A     +L  A  V  HI +      ++++S  
Sbjct: 22  TQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILS-- 79

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHIN-ALASVLVYASCHAEALELYRTIW-GSCREV 476
              Y K   L++ +++ + +  ++ V  N A++    Y SC ++A+ +Y+ +   +   +
Sbjct: 80  --VYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSC-SDAVRVYKLMLKDAAMNL 136

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           N  TFS +L  C+    ++ G+ I+   LK  +  D+FV S ++DMY K G I DAKR F
Sbjct: 137 NRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYF 196

Query: 537 ----------------------------RKIC----RDSLAGWNAMMMGYAQHGCYHEVS 564
                                       R  C    RDS++ W  M+ G  Q+G   E  
Sbjct: 197 DEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSIS-WTIMITGLMQNGLEREAL 255

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY------ 618
           ++F +M   G   D+ T+ +VLT+C     + E +        +H  + + +H       
Sbjct: 256 DMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGK-------QIHAYVIRTDHKDNVFVG 308

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMP 642
           + +VD+  +   ++ A+    +MP
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMP 332



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 45/90 (50%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +LK C    +  Q K +HCL LK     + F+ + +I  Y K G +  A   F  I 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           + +L  WN ++  Y++ G   ++  +FN M
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLM 97


>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
 gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 215/734 (29%), Positives = 378/734 (51%), Gaps = 29/734 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+ L+ + G   D  + T L+  + K  D   A R +FD  + +D++T+N ++SGLA+ 
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA-RQVFDKMHVKDVVTWNTMVSGLAQN 179

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
             S  AL LF  +R   +  D  +  +L+ A   L+++++   +HG+ +K GF       
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFS 237

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           SG I+ Y    ++ +AE  F +    D  ++  M+  Y  NG F++  E+F  MR+  + 
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           +N+ +  + L A+    D+ +G  IH + V+ G +  V   +  ++M++Y +CG+   A 
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV--SVATSLMSMYSKCGELEIAE 355

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F  I + DVVSWS  IA+   A    EA  LF+D+     + N  T+ ++L    G  
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
             R GK I  +  K      +    A+ISMY KCG+ + A   F+ L  KD+V++N++  
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY++ G  N+A D++ +M    + P+  TM  +L+  +      +   V+  IIK GF  
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
           +  +   LI  + KC+AL  +  +  +   +K+ V  N + +  +      EA+  +R +
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                + N  TF  +++A A ++ L  G ++H   ++  +     V ++++DMY KCG I
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           E +++ F +I    +  WN M+  YA HG      +LF  M +  +KPD +++L+VL++C
Sbjct: 656 ESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGLV E +     M + H +  ++EHYAC+VDLLG+ GL   A   + +M +     +
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGV 775

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL++  ++ N+ L   A  +L++L+P N S Y     L    G  N+V +++     
Sbjct: 776 WGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL----GEVNNVSRIK----- 826

Query: 710 KFLCKEPGYSWIHV 723
               K P  SWI V
Sbjct: 827 ----KVPACSWIEV 836



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 187/729 (25%), Positives = 352/729 (48%), Gaps = 36/729 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++  LI +G  L P     LI+ ++ F   +   R +FD+ ++  ++ +N++I G  R 
Sbjct: 23  QVHGSLIVSG--LKP--HNQLINAYSLFQR-QDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77

Query: 60  CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC-GSL--QENEIVHGVCLKLGFSSRVYL 115
                AL  F  +   +G+ PD ++F+  +KAC GS+  ++   +H +  ++G  S VY+
Sbjct: 78  GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +E Y K+ ++VSA   F      D V +  MV G   NG    +  +F +MRS  +
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197

Query: 176 ELNEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +++  SL  ++ A   +++ +    +HG  +K GF+       ++ ++++Y  C     A
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA----FSSGLIDMYCNCADLYAA 253

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F+E+   D  SW   +AA A +G   E   LF  +R  D ++N+    + L +    
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G  I  +  + G +  VS+  +L+SMY KCG++  A  +F  +  +D VSW++MI
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A Y + G  ++A+ +F  M+   + PN  T+ S+L+  +   + +    +H + IK+   
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT- 468
            +    + +I+ Y KC   + + +    +  K+AV  NALA          +A ++Y+  
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493

Query: 469 -IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            + G C +    T   +L+ CA  +D  +G  ++   +K  +D +  V  A+I+M+ KC 
Sbjct: 494 KLHGVCPD--SRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCD 551

Query: 528 TIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            +  A   F K C    S   WN MM GY  HG   E    F +M     +P+ +T++ +
Sbjct: 552 ALAAAIVLFDK-CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNI 610

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           + +      +R   +  S +    G   Q      +VD+  + G++E ++    ++    
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI---S 666

Query: 646 DAHI--WQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
           + +I  W ++LSA   +G  +  + L    +  EL+PD+ S   +LS     AG+  +  
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACR-HAGLVEEGK 725

Query: 702 KLRKEMKEK 710
           ++ +EM E+
Sbjct: 726 RIFEEMGER 734


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 181/581 (31%), Positives = 324/581 (55%), Gaps = 14/581 (2%)

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
           F+  +++ A+       Q+H   +++G +       + ++++ Y+R G+  +A K+FDE+
Sbjct: 71  FTFPSLIRAAPSNASAAQLHACALRLGLVRPSV-FTSGSLVHAYLRFGRISEAYKVFDEM 129

Query: 240 TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS--SVGGERILRA 294
           +E DV +W+  ++  C      EA GLF  +       +  T+ ++L    + G+++L  
Sbjct: 130 SERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVL-- 187

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
              +  +  K G  + + + NALI +YGK G + +A+ +F  +  +D V+WNS+I+G  +
Sbjct: 188 ALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQ 247

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            G    AL MF  M    + P+  T+ S+  A++     + A  +H ++++ G+ +DD +
Sbjct: 248 RGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDII 307

Query: 415 I-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-- 471
             + ++  Y K + +  ++R+   +  +++V  N L +  +      EA+E Y  +    
Sbjct: 308 AGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHE 367

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
             + + G TF  VL A + +  L+QG  +H L++K   + D++V + +ID+Y KCG + +
Sbjct: 368 GLKAIQG-TFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAE 426

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A   F K+ R S   WNA++ G   HG   E   LF++M + G+KPD +T++++L +C H
Sbjct: 427 AMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSH 486

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV + R++   M   + ++P  +HYAC+ D+LGR G L+ A   I  MPI PD+ +W 
Sbjct: 487 AGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWG 546

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL AC I+GN+++G +A   L EL P+N   YVL+SN+YA  G W+ V ++R  ++ + 
Sbjct: 547 ALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQN 606

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSS--HSQSKEIYKELIKL 750
           L K PG+S I V    + FY+G+ +  H Q +EI  EL  L
Sbjct: 607 LQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSL 647



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 270/558 (48%), Gaps = 29/558 (5%)

Query: 50  NALISGLARFCQSGPALKLFDRLR--YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL 107
           N LI+  +R      A  L   +       RPD FTF SL++A  S      +H   L+L
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQLHACALRL 96

Query: 108 GFSSRVYLVSG-FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
           G        SG  +  Y + G I  A   F +  + D  A+ AM+ G   N    ++  +
Sbjct: 97  GLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGL 156

Query: 167 FVEMRSLGLELNEFSLTAVLGASFDVKEGEQI-----HGFGVKVGFLSG--VCNHLNNAI 219
           F  M   G+  +  ++++VL     V  G+Q+     H + VK G      VC    NA+
Sbjct: 157 FGRMVGEGVAGDTVTVSSVL--PMCVLLGDQVLALVMHVYAVKHGLDKELFVC----NAL 210

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD----GVEAFGLFKDLRFNDFQIN 275
           +++Y + G   +A  +F  +   D+V+W+  I + C+       A  +F+ +R +    +
Sbjct: 211 IDVYGKLGMLEEAQCVFHGMECRDLVTWNS-IISGCEQRGQTAAALKMFQGMRGSGVSPD 269

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIF 334
             T+++L S++      R+ K +  +  + G+ ++ +  GNA++ MY K   +  A+ +F
Sbjct: 270 VLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMF 329

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF-SLIPNGYTMASILEAVSNSKSL 393
           D +  +DSVSWN++I GY +NG  N+A++ + HM +   L     T  S+L A S+  +L
Sbjct: 330 DSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGAL 389

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +Q M++H+  IK G  +D  + +CLI  Y KC  L E+  +  ++ +++    NA+ S L
Sbjct: 390 QQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGL 449

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                 AEAL L+  +     + +  TF  +L AC+    ++QG++   + ++  YD   
Sbjct: 450 GVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDV-MQVTYDIVP 508

Query: 514 FVE--SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
             +  + + DM  + G +++A    + +  +   A W A++     HG   E+  + ++ 
Sbjct: 509 IAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNV-EMGKVASQ- 566

Query: 571 SKFGVKPDEITYLAVLTS 588
           + F + P+ + Y  ++++
Sbjct: 567 NLFELDPENVGYYVLMSN 584



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 208/439 (47%), Gaps = 40/439 (9%)

Query: 18  STTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL 77
           S +L+  + +F     A++   +   RD+  +NA++SGL R  ++  A+ LF R+  +G+
Sbjct: 106 SGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGV 165

Query: 78  RPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
             D  T SS++  C  L +     ++H   +K G    +++ +  I+ Y K G +  A+ 
Sbjct: 166 AGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQC 225

Query: 135 CFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE---LNEFSLTAVLGAS 189
            F   +C DL  V + +++ G    G+   + ++F  MR  G+    L   SL + +   
Sbjct: 226 VFHGMECRDL--VTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQG 283

Query: 190 FDVKEGEQIHGFGVKVGF-----LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
            D +  + +H + ++ G+     ++G      NAI+++Y +      A +MFD +   D 
Sbjct: 284 GDGRSAKSLHCYVMRRGWDVDDIIAG------NAIVDMYAKLSNIEAAQRMFDSMPVQDS 337

Query: 245 VSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
           VSW+  I        A + VE +G  +  +    +  + T +++L +      L+ G ++
Sbjct: 338 VSWNTLITGYMQNGLANEAVERYGHMQ--KHEGLKAIQGTFVSVLPAYSHLGALQQGMRM 395

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
            A   K+G    V +G  LI +Y KCG++ +A  +F+ +  + +  WN++I+G   +G  
Sbjct: 396 HALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHG 455

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNS------KSLKQAMQVHSHIIKSGFLLDD 412
            +AL +F  M +  + P+  T  S+L A S++      +S    MQV   I+        
Sbjct: 456 AEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIA----- 510

Query: 413 SMISCLITTYGKCNALNES 431
              +C+    G+   L+E+
Sbjct: 511 KHYACMADMLGRAGQLDEA 529



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 170/359 (47%), Gaps = 19/359 (5%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K+G   +  +   LI  + K      A       + RD++T+N++ISG  +  Q+  AL
Sbjct: 196 VKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAAL 255

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFS-SRVYLVSGFIEN 122
           K+F  +R  G+ PD  T  SL  A    G  +  + +H   ++ G+    +   +  ++ 
Sbjct: 256 KMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDM 315

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFS 181
           YAK   I +A+  F      D+V++  ++ GY+ NG  +++ E +  M +  GL+  + +
Sbjct: 316 YAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGT 375

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             +VL A      +++G ++H   +K+G    V  ++   +++LY +CG+  +A+ +F++
Sbjct: 376 FVSVLPAYSHLGALQQGMRMHALSIKIGL--NVDVYVGTCLIDLYAKCGKLAEAMLLFEK 433

Query: 239 ITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +       W+  I+       G EA  LF  ++    + +  T ++LL++     ++  G
Sbjct: 434 MPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQG 493

Query: 296 KQIQAFCYKVGFMEVVSIGN---ALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
           +    F       ++V I      +  M G+ GQ+++A +    +  K DS  W +++ 
Sbjct: 494 RSF--FDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLG 550



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++L IK G ++D  + T LI  + K      A         R    +NA+ISGL    
Sbjct: 394 RMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHG 453

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL LF R++ +G++PD  TF SL+ AC
Sbjct: 454 HGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484


>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 655

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 209/659 (31%), Positives = 348/659 (52%), Gaps = 25/659 (3%)

Query: 84  FSSLVKAC---GSLQENEIVHGVCLK--LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           F  L+++C    +L   +I+H   LK  L  SS   LV+     YA   E+  A   F +
Sbjct: 2   FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60

Query: 139 CLD--LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VK 193
                ++ +A+  M+  YV NG  +K+ +++ +M + G+   +F+   VL A      ++
Sbjct: 61  IPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIE 120

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G+ IH       F + +  ++  A+++ Y +CG+   A+K+FDE+ + D+V+W+  I+ 
Sbjct: 121 DGKLIHSHVKCSNFAADM--YVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISG 178

Query: 254 ---ACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
               C   +  GLF D+R +D    N  T++ +  ++G    LR GK +  +C ++GF  
Sbjct: 179 FSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + +   ++ +Y K   +  AR +FD    K+ V+W++MI GY EN    +A ++F  ML
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQML 298

Query: 370 ---EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
              + +++     +  IL   +    L     VH + IK+GF+LD ++ + +I+ Y K  
Sbjct: 299 VNADMAMV-TPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYG 357

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           +L ++ R  +EI  K+ V  N+L S  V      E+  L+  +  S    + +T   +L 
Sbjct: 358 SLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILT 417

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           AC+ +  L  G + H   +   Y  +  + +A++DMY KCG +  AKR F  + +  +  
Sbjct: 418 ACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVS 477

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN M+ G+  HG   E  +LFN M   GV PDE+T LA+L++C H+GLV E +   + MS
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537

Query: 607 --DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
             D + +IP+L+HY C+ DLL R G L+ A   +++MP  PD  +  +LLSAC  Y N++
Sbjct: 538 RGDFN-VIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVE 596

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           LG     K+  L    ES  VLLSN Y++A  W D  K+R   K+  L K PGYSW+ V
Sbjct: 597 LGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDV 654



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 211/408 (51%), Gaps = 16/408 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF-DRL 72
           D  + T L+  + K  +   A +   +   RDI+ +NA+ISG +  C     + LF D  
Sbjct: 137 DMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMR 196

Query: 73  RYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R   L P+  T   +  A    G+L+E + VHG C ++GFS+ + + +G ++ YAKS  I
Sbjct: 197 RSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV---- 185
           + A   F      + V ++AM+ GYV N    ++ EVF++M  +  ++   +  A+    
Sbjct: 257 IYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQML-VNADMAMVTPVAIGLIL 315

Query: 186 LG-ASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
           +G A F D+  G  +H + +K GF+  +   + N +++ Y + G   DA + F EI   D
Sbjct: 316 MGCARFGDLSGGRCVHCYAIKAGFILDLT--VGNTVISFYAKYGSLCDAFRQFTEIGLKD 373

Query: 244 VVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           +VS++  I+     C   E+F LF  ++ +  + +  T++ +L++      L  G     
Sbjct: 374 IVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHG 433

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
           +C   G+    SI NAL+ MY KCG++  A+ +FD +  +D VSWN+M+ G+  +G   +
Sbjct: 434 YCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           AL +F  M +  + P+  T+ +IL A S+S  + +  Q+ + + +  F
Sbjct: 494 ALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF 541



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 220/449 (48%), Gaps = 16/449 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL L+ ++   G+RP  FT+  ++KAC  L   ++ +++H       F++ +Y+ +  ++
Sbjct: 87  ALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVD 146

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS---LGLELN 178
            YAK GE+  A   F +    D VA+ AM+ G+  +        +F++MR    L   L+
Sbjct: 147 FYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLS 206

Query: 179 EF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
               +   LG +  ++EG+ +HG+  ++GF + +   +   I+++Y +    + A ++FD
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV--VKTGILDVYAKSKCIIYARRVFD 264

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERI-- 291
              + + V+WS  I    +     EA  +F  +  N D  +     I L+  +G  R   
Sbjct: 265 SDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAIGLI-LMGCARFGD 323

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ +  +  K GF+  +++GN +IS Y K G + DA   F  +  KD VS+NS+I+G
Sbjct: 324 LSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISG 383

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             EN    ++  +F  M    + P+  T+  IL A SN  +L      H + + +G+ ++
Sbjct: 384 CVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVN 443

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L+  Y KC  L  +KRV   + K++ V  N +           EAL L+ ++  
Sbjct: 444 TSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQD 503

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +    +  T   +L AC+    +++GK +
Sbjct: 504 TGVHPDEVTLLAILSACSHSGLVDEGKQL 532



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 123/247 (49%), Gaps = 11/247 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G  LD  +  T+IS + K+     AFR   +   +DI++YN+LISG    C++  + 
Sbjct: 335 IKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESF 394

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +LF +++  G+RPD  T   ++ AC    +L      HG C+  G++    + +  ++ Y
Sbjct: 395 RLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMY 454

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K G++  A+  F      D V++  M+ G+  +G   ++  +F  M+  G+  +E +L 
Sbjct: 455 TKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLL 514

Query: 184 AVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDE 238
           A+L A   S  V EG+Q+     +  F   V   L+  N + +L  R G   +A    ++
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDF--NVIPRLDHYNCMTDLLARAGYLDEAYDFVNK 572

Query: 239 IT-EPDV 244
           +  EPD+
Sbjct: 573 MPFEPDI 579


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 180/516 (34%), Positives = 283/516 (54%), Gaps = 6/516 (1%)

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F++I  P   + +  I    +     +A   ++ +       + +T  +L  S G   +
Sbjct: 96  VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---V 152

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQ+     K+GF     I N L++MY  CG +  AR +FD ++ K  VSW +MI  
Sbjct: 153 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++    ++A+ +F  M   S+ PN  T+ ++L A + S+ L+ A QVH +I ++G    
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y KC     ++ + +++ +KN    N + +  V  S + EAL L+  +  
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S  + +  T + +L AC  +  LE GK +H    K + + D+ + +A++DMY KCG+IE 
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 392

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A R F+++    +  W A+++G A  G   +   LF++M    VKPD IT++ VL +C H
Sbjct: 393 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSH 452

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AGLV E   Y + M + +G+ P +EHY C+VD+LGR G +  A+  I  MP+ PD  +  
Sbjct: 453 AGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLV 512

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            LLSAC I+GN+ +   A  +L+EL P N  TYVLLSN+Y+S   W    K+R+ M E+ 
Sbjct: 513 GLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERN 572

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           + K PG S I VGG  H F  GD SH QS EIY+ L
Sbjct: 573 IKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETL 608



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 204/414 (49%), Gaps = 10/414 (2%)

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTA 184
           SG +  A + F    +       +++ GY  N    +   +F ++  L GL+ + F+  +
Sbjct: 87  SGSLPYARLVFNQIPNPTTFTCNSIIRGYT-NKNLPRQAILFYQLMMLQGLDPDRFTFPS 145

Query: 185 VLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           +  +   + EG+Q+H    K+GF S    ++ N +MN+Y  CG  + A K+FD++    V
Sbjct: 146 LFKSCGVLCEGKQLHCHSTKLGFASDA--YIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 203

Query: 245 VSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           VSW+  I A        EA  LF+ +     + NE T++N+L++    R L   KQ+  +
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKY 263

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             + G      + +AL+ +Y KCG    AR +F+ +  K+   WN MI G+ E+  + +A
Sbjct: 264 IDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEA 323

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L +F  M    +  +  TMAS+L A ++  +L+    +H +I K    +D ++ + L+  
Sbjct: 324 LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 383

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y KC ++  + RV  E+ +K+ +   AL   L       +ALEL+  +  S  + +  TF
Sbjct: 384 YAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITF 443

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
             VL AC+    + +G A +  ++  +Y     +E    ++DM  + G I +A+
Sbjct: 444 VGVLAACSHAGLVNEGIA-YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAE 496



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 216/449 (48%), Gaps = 15/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRA--FRFLFDT-QNRDIITYNALISGLA 57
           QI++ +++    +DP  ++ +++ F    D       R +F+   N    T N++I G  
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVA-FCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
                  A+  +  +  QGL PD FTF SL K+CG L E + +H    KLGF+S  Y+ +
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQN 176

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV-WNGEFDKSKEVFVEMRSLGLE 176
             +  Y+  G +VSA   F   ++   V++  M+  Y  W+   +  K +F  M    ++
Sbjct: 177 TLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIK-LFRRMEIASVK 235

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NE +L  VL A   S D++  +Q+H +  + G   G    L +A+M++Y +CG    A 
Sbjct: 236 PNEITLVNVLTACARSRDLETAKQVHKYIDETGI--GFHTVLTSALMDVYCKCGCYPLAR 293

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+++ E ++  W+  I       D  EA  LF +++ +  + ++ TM +LL +     
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG 353

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK +  +  K      V++G AL+ MY KCG +  A  +F  +  KD ++W ++I 
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFL 409
           G +  G   +AL++F  M    + P+  T   +L A S++  + + +   +S   K G  
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQ 473

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
                  C++   G+   + E++ ++  +
Sbjct: 474 PSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 15/184 (8%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC---KCGTIEDAKRAFRKICR 541
           L+ C  M+ L+Q   IH   L+     D F  S ++  +C     G++  A+  F +I  
Sbjct: 47  LEKCTTMSQLKQ---IHAQMLRTCLFVDPFSASKIV-AFCALHDSGSLPYARLVFNQIPN 102

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            +    N+++ GY       +    +  M   G+ PD  T+ ++  SC   G++ E +  
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQ- 158

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           L C S   G          ++++    G L  A+   D+M +      W +++ A   Y 
Sbjct: 159 LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIGA---YA 214

Query: 662 NIDL 665
             DL
Sbjct: 215 QWDL 218


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 204/722 (28%), Positives = 352/722 (48%), Gaps = 53/722 (7%)

Query: 80  DAFTFSSLVKACGSLQE---NEIVHGVCLKL----GFSSRVYLVSGFIENYAKSGEIVSA 132
           D F      K+  +L+       +HG  L+     GF+  V   +  +  YA+ G++ +A
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAV--ANALLTAYARCGDLTAA 115

Query: 133 EMCFRDCLDLDNVAYTAMVCGYV----WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
              F      D V + +++        W    D  +++ +E    G  L+ F+L +VL A
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLE----GHPLSSFTLVSVLLA 171

Query: 189 ----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD- 243
               + D++ G + H F +K GFL G      NA++++Y R G   DA  +F  +   D 
Sbjct: 172 CSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDS 231

Query: 244 ----VVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
               VV+W+  ++         EA  +  D+     + +  T  + L +     +L  G+
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291

Query: 297 QIQAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLI--FKDSVSWNSMIAGYS 353
           ++ A+  K   +   S + +AL+ MY    +V  AR +FD +    +    WN+M+ GY+
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351

Query: 354 ENGFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           + G   +AL++F  M  E  ++P+  T+A +L A + S++      VH +++K G   + 
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT---- 468
            + + L+  Y +   +  ++ + + I+ ++ V  N L +  V      +A +L R     
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471

Query: 469 -----------IWGSCREV---NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                      I G+  E    N  T   +L  CA +    +GK IH  A++   D DI 
Sbjct: 472 GRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIA 531

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V SA++DMY KCG +  ++  F ++ + ++  WN ++M Y  HG   E   LF++M    
Sbjct: 532 VGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSN 591

Query: 575 -VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
             KP+E+T++A L +C H+G+V         M   HG+ P  + +AC VD+LGR G L+ 
Sbjct: 592 EAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDE 651

Query: 634 AKMTIDQM-PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
           A   I  M P       W S L AC ++ N+ LG +A  +L +L+PD  S YVLL N+Y+
Sbjct: 652 AYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYS 711

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           +AG+W    ++R  M+++ + KEPG SWI + G  H F AG+S+H +S  ++  +  L+E
Sbjct: 712 AAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWE 771

Query: 753 HM 754
            M
Sbjct: 772 RM 773



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 237/562 (42%), Gaps = 41/562 (7%)

Query: 11  HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           H   P ++  L++ + +  D   A        +RD +T+N+LI+ L  F +  PAL    
Sbjct: 92  HGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALR 151

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGF--SSRVYLVSGFIENYA 124
            +  +G    +FT  S++ AC  L E+       H   LK GF      +  +  +  YA
Sbjct: 152 DMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYA 211

Query: 125 KSGEIVSAEMCFRDCLDLDN-----VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           + G +  A+M F      D+     V +  MV   V +G   ++ EV  +M + G+  + 
Sbjct: 212 RLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDG 271

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +  + L A   ++    G ++H + +K   L+   + + +A++++Y    +   A ++F
Sbjct: 272 ITFASALPACSQLEMLSLGREMHAYVLKDSDLAA-NSFVASALVDMYASHERVGVARRVF 330

Query: 237 DEIT--EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI-NEYTMINLLSSVGGER 290
           D +      +  W+  +   A A    EA  LF  +      + +E T+  +L +     
Sbjct: 331 DMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSE 390

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
                + +  +  K G  +   + NAL+ +Y + G +  AR IF  +  +D VSWN++I 
Sbjct: 391 TFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLIT 450

Query: 351 GYSENGFFNQALDMFCHML------------------EFSLIPNGYTMASILEAVSNSKS 392
           G    G  + A  +   M                   E  ++PN  T+ ++L   +   +
Sbjct: 451 GCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAA 510

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
             +  ++H + ++     D ++ S L+  Y KC  L  S+ V   + K+N +  N L   
Sbjct: 511 PAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMA 570

Query: 453 LVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI-HCLALKARYD 510
                   EA+ L+ R +  +  + N  TF   L AC+    +++G  + H +       
Sbjct: 571 YGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQ 630

Query: 511 QDIFVESAVIDMYCKCGTIEDA 532
               + +  +D+  + G +++A
Sbjct: 631 PTPDLHACAVDILGRAGRLDEA 652



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 22/209 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K G   +P +   L+  + +  D   A       + RD++++N LI+G      
Sbjct: 398 VHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGH 457

Query: 62  SGPALKLFDRLRYQG------------------LRPDAFTFSSLVKACGSL---QENEIV 100
              A +L   ++ QG                  + P+  T  +L+  C  L    + + +
Sbjct: 458 IHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEI 517

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           HG  ++    S + + S  ++ YAK G +  +   F      + + +  ++  Y  +G  
Sbjct: 518 HGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLG 577

Query: 161 DKSKEVFVEM-RSLGLELNEFSLTAVLGA 188
           D++  +F  M  S   + NE +  A L A
Sbjct: 578 DEAIALFDRMVMSNEAKPNEVTFIAALAA 606


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 170/513 (33%), Positives = 277/513 (53%), Gaps = 22/513 (4%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A   +  +R  D +++ + + ++L +     + R GK+I  F  K G +  V + NAL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMI----------------------AGYSENGF 357
           MY +CG +  AR +FD +  +D VSW++MI                      AGY     
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +   +F  M+E ++ PN  TM S++ +     +++   ++H++I+++GF +  ++ + 
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L+  YGKC  +  ++ +   +  K+ +   A+ S    A+C   A +L+  +  +    N
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T   +L  CA    L+ GK  H    K   + D+ +++A+IDMY KCG I  A+R F 
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +     +  WN MM GY  HG   +   LF +M   GVKP++IT++  L +C HAGLV E
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            +     M    GL+P++EHY C+VDLLGR GLL+ A   I+ MP+ P+  IW ++L+AC
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            I+ N ++G LA  +LL L+P N    VL+SN+YA+A  WNDV  +RK +K+  + KEPG
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            S I V G  H F  GD++H   ++I + L ++
Sbjct: 573 MSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEM 605



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 205/420 (48%), Gaps = 40/420 (9%)

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            +  MR L +E++ F + +VL A   +   + G++IHGF VK G +S V   + NA+M +
Sbjct: 96  TYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDV--FVVNALMQM 153

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFG----------LFKDLRFNDF 272
           Y  CG  + A  +FD+++E DVVSWS  I A       F           +   +R ND 
Sbjct: 154 YSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDL 213

Query: 273 Q---------------INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           +                N+ TM++L+ S G    ++ GK++ A+  + GF   +++  AL
Sbjct: 214 EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATAL 273

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           + MYGKCG++  AR+IFD +  KD ++W +MI+ Y++    + A  +F  M +  + PN 
Sbjct: 274 VDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNE 333

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM S+L   + + +L      H++I K G  +D  + + LI  Y KC  ++ ++R+ SE
Sbjct: 334 LTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE 393

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
              ++    N + +         +AL+L+  +     + N  TF   L AC+    + +G
Sbjct: 394 AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEG 453

Query: 498 KA-----IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           K      IH   L  + +        ++D+  + G +++A +    +    ++A W AM+
Sbjct: 454 KGLFEKMIHDFGLVPKVEH----YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 34/406 (8%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIE 121
           AL  +  +R   +  D+F   S++KAC  +    +   +HG  +K G  S V++V+  ++
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 122 NYAKSGEIVSAEMCF-----RDCLDLDN-----------------VAYTAMVCGYVWNGE 159
            Y++ G +VSA + F     RD +                     V++TAM+ GY+   +
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
            ++ + +FV M    +  N+ ++ +++   G    V+ G+++H + ++ GF  G+   L 
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF--GMSLALA 270

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQ 273
            A++++Y +CG+   A  +FD +   DV++W+  I+A         AF LF  +R N  +
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVR 330

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            NE TM++LLS       L  GK   A+  K G    V +  ALI MY KCG ++ A+ +
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F   I +D  +WN M+AGY  +G+  +AL +F  M    + PN  T    L A S++  +
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450

Query: 394 KQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +   +   +I   G +       C++   G+   L+E+ +++  +
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 159/331 (48%), Gaps = 14/331 (4%)

Query: 33  RAFRFLF-DTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           RA+  LF     R I+++ A+I+G  R        +LF R+  + + P+  T  SL+ +C
Sbjct: 183 RAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISC 242

Query: 92  ---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
              G++Q  + +H   L+ GF   + L +  ++ Y K GEI SA   F    + D + +T
Sbjct: 243 GFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWT 302

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKV 205
           AM+  Y      D + ++FV+MR  G+  NE ++ ++L     +  +  G+  H +  K 
Sbjct: 303 AMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQ 362

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFG 262
           G    V   L  A++++Y +CG    A ++F E  + D+ +W+  +A       G +A  
Sbjct: 363 GVEVDVI--LKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALK 420

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGNALISMY 321
           LF ++     + N+ T I  L +     ++  GK + +   +  G +  V     ++ + 
Sbjct: 421 LFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLL 480

Query: 322 GKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
           G+ G +++A  + + +    +++ W +M+A 
Sbjct: 481 GRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 135/266 (50%), Gaps = 20/266 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++++ +++NG  +   L+T L+  + K  + R A R +FD+ +N+D++T+ A+IS  A+ 
Sbjct: 253 RLHAYILRNGFGMSLALATALVDMYGKCGEIRSA-RAIFDSMKNKDVMTWTAMISAYAQA 311

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                A +LF ++R  G+RP+  T  SL+  C   G+L   +  H    K G    V L 
Sbjct: 312 NCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILK 371

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ YAK G+I  A+  F + +D D   +  M+ GY  +G  +K+ ++F EM +LG++
Sbjct: 372 TALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVK 431

Query: 177 LNEFSLTAVLGASFD---VKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
            N+ +    L A      V EG     + IH FG+        C      +++L  R G 
Sbjct: 432 PNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGC------MVDLLGRAGL 485

Query: 229 KLDAVKMFDEI-TEPDVVSWSERIAA 253
             +A KM + +   P++  W   +AA
Sbjct: 486 LDEAYKMIESMPVTPNIAIWGAMLAA 511


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 186/648 (28%), Positives = 342/648 (52%), Gaps = 13/648 (2%)

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           V+  +  Y KS  +  A   F      + V++T M+ GY  N +  ++  ++ EM   G+
Sbjct: 80  VNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV 139

Query: 176 ELNEFSLTAVLGASFD----VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + +  +  A L + FD    +KE  QIH   ++ GF + +   + N++++ Y +      
Sbjct: 140 KPDHITF-ATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLI--VFNSLVDSYCKTCCLDI 196

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS-SVG 287
           A ++F E+   D VS++  I          EA  LF  +R  DFQ + +T   +L  SVG
Sbjct: 197 ASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            E ++  G+QI     K  ++  + + NAL+  Y K   ++ A+++FD +   D VS+N 
Sbjct: 257 SEDVI-FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNI 315

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I GY+ NG + ++ D+F  +   S     +  A++L   +   +L    Q H+  + + 
Sbjct: 316 IITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTT 375

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
            + +  + + L+  Y KC    ++ R+ + +  +N+V   A+ S+ V    H EAL++++
Sbjct: 376 AVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFK 435

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       + +TF+  LKA A +  +  GK +H   ++      +F  S ++DMY  CG
Sbjct: 436 EMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCG 495

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           +++DA   F+++   ++  WNA++  Y+Q+G      + F  M + G+ PD +++L+VLT
Sbjct: 496 SMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLT 555

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H GLV +A  Y + M+ ++ L P+ +HYA ++D+L R G    A+  I +MP  PD 
Sbjct: 556 ACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDE 615

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKE 706
            +W S+L++C I+ N DL   A  +L ++    + + YV +SN+YA AG W +  K++K 
Sbjct: 616 VMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKA 675

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           M+E+ + K   YSW+ +    H F A D +H Q+++I +++  L E M
Sbjct: 676 MRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELM 723



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 276/580 (47%), Gaps = 48/580 (8%)

Query: 21  LISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           ++S + K  +  RA R LF++  +R+ +++  +I G ++  Q   A  L+  +   G++P
Sbjct: 83  MVSGYVKSRNLFRA-RELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKP 141

Query: 80  DAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D  TF++L+       +L+E   +H   ++ GFS+ + + +  +++Y K+  +  A   F
Sbjct: 142 DHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLF 201

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVK 193
            +    D+V++  M+ GY   G  +++ ++F++MR++  + + F+  A+LG S    DV 
Sbjct: 202 SEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVI 261

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+QIHG  +K  ++  +   + NA+++ Y +      A  +FDE+ E D VS++  I  
Sbjct: 262 FGQQIHGLAIKTSYVWDI--FVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITG 319

Query: 254 -ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A +G   ++F LFK L+   F    +    +LS    E  L  G+Q  A       +  
Sbjct: 320 YAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE 379

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V +GNAL+ MY KC +  DA  IF  L +++SV W ++I+ Y + GF  +AL MF  M  
Sbjct: 380 VQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNR 439

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            ++  +  T AS L+A +N  S+    Q+HS +I+ G L      S L+  Y  C ++ +
Sbjct: 440 ENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKD 499

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +  V  E+  +N V  NAL S              +  +  S    +  +F  VL AC+ 
Sbjct: 500 AIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSH 559

Query: 491 MTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
              +E+     + +    + D      + +ID+ C+ G                      
Sbjct: 560 RGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGR--------------------- 598

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
                     ++E  NL ++M     +PDE+ + +VL SC
Sbjct: 599 ----------FNEAENLISEMP---FEPDEVMWSSVLNSC 625



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 222/449 (49%), Gaps = 14/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S +I+ G     I+  +L+  + K      A +   +   +D +++N +I+G  ++ 
Sbjct: 164 QIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYG 223

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               ALKLF ++R    +P  FTF++++      ++    + +HG+ +K  +   +++ +
Sbjct: 224 FREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVAN 283

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K   I  A+  F +  +LD V+Y  ++ GY WNG+++KS ++F  ++    + 
Sbjct: 284 ALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDR 343

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
             F    +L  +    ++  G Q H   V    +S V   + NA++++Y +C +  DA +
Sbjct: 344 KNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEV--QVGNALVDMYAKCEKFEDANR 401

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  +   + V W+  I+         EA  +FK++   +   ++ T  + L +      
Sbjct: 402 IFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLAS 461

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ+ +   ++G +  V  G+ L+ MY  CG + DA  +F  +  ++ V WN++I+ 
Sbjct: 462 VSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISA 521

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS+NG        F  M+E  L P+  +  S+L A S+   +++A+   + + +  + LD
Sbjct: 522 YSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQV-YKLD 580

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
                 + +I    +    NE++ ++SE+
Sbjct: 581 PRRKHYATMIDVLCRSGRFNEAENLISEM 609



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 149/314 (47%), Gaps = 33/314 (10%)

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS----- 342
            ERI+     + A   K GF   +S  N  +    +  Q+  AR +FD + ++++     
Sbjct: 25  SERIVDI--PVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNM 82

Query: 343 --------------------------VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
                                     VSW  MI GYS+N    +A +++  M    + P+
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T A++L    ++ +LK+ +Q+HSHII+ GF     + + L+ +Y K   L+ + ++ S
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           E+  K++V  N + +         EAL+L+  +     + +G TF+ +L       D+  
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G+ IH LA+K  Y  DIFV +A++D Y K   I+ AK  F ++       +N ++ GYA 
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322

Query: 557 HGCYHEVSNLFNKM 570
           +G Y +  +LF ++
Sbjct: 323 NGQYEKSFDLFKRL 336


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 204/720 (28%), Positives = 350/720 (48%), Gaps = 49/720 (6%)

Query: 80  DAFTFSSLVKACGSLQENEIV---HGVCLK--LGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           D F      K+  +L+    V   HG  L+  L       + +  +  YA+ G++ +A  
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115

Query: 135 CFRDCLDLDNVAYTAMVCGYV----WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            F      D V + +++        W    D  +++ +E    G  L  F+L +VL A  
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLE----GHPLTSFTLVSVLLACS 171

Query: 189 --SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV-- 244
             + D++ G + H F +K GFL G      NA++++Y R G   DA  +F  +   DV  
Sbjct: 172 HLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPG 231

Query: 245 ---VSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
              V+W+  ++         EA  +  D+     + +  T  + L +     +L  G+++
Sbjct: 232 GGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREM 291

Query: 299 QAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVS--WNSMIAGYSEN 355
            A+  K   +   S + +AL+ MY    +V  AR +FD +   +     WN+MI GY++ 
Sbjct: 292 HAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQA 351

Query: 356 GFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           G    AL++F  M  E  ++P+  T+A +L + + S++      VH +++K G   +  +
Sbjct: 352 GLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFV 411

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT------ 468
            + L+  Y +   ++ ++ + + I+ ++ V  N L +  V      +A +L R       
Sbjct: 412 QNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGR 471

Query: 469 ---------IWGSCREV---NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
                    I G+  E    N  T   +L  CA +    +GK IH  A++   D D+ V 
Sbjct: 472 FTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVG 531

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGV 575
           SA++DMY KCG +  ++  F ++ R ++  WN ++M Y  HG   E   LF++M +    
Sbjct: 532 SALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEA 591

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
           KP+E+T++A L +C H+G+V         M   HG+ P  + +AC VD+LGR G L+ A 
Sbjct: 592 KPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAY 651

Query: 636 MTIDQM-PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
             I  M P       W S L AC ++ N+ LG +A  +L EL+PD  S YVLL N+Y++A
Sbjct: 652 RIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSAA 711

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G+W    ++R  M+++ + KEPG SWI + G  H F AG+S+H +S  ++  +  L+E M
Sbjct: 712 GLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERM 771



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 121/560 (21%), Positives = 234/560 (41%), Gaps = 41/560 (7%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           P +S  L++ + +  D   A        +RD +T+N+LI+ L  F +  PAL     +  
Sbjct: 94  PAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLL 153

Query: 75  QGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGF--SSRVYLVSGFIENYAKSGE 128
           +G    +FT  S++ AC  L E+       H   LK GF      +  +  +  YA+ G 
Sbjct: 154 EGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGL 213

Query: 129 IVSAEMCF-----RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           +  A+  F      D      V +  MV   V +G   ++ EV  +M + G+  +  +  
Sbjct: 214 VDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFA 273

Query: 184 AVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           + L A   ++    G ++H + +K   L+   + + +A++++Y    +   A  +FD + 
Sbjct: 274 SALPACSQLEMLSLGREMHAYVLKDADLAA-NSFVASALVDMYASHERVGAARLVFDMVP 332

Query: 241 --EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI-NEYTMINLLSSVGGERILRA 294
             E  +  W+  I   A A    +A  LF  +      + +E T+  +L S         
Sbjct: 333 AGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAG 392

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            + +  +  K G  +   + NAL+ +Y + G ++ AR IF  +  +D VSWN++I G   
Sbjct: 393 KEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVV 452

Query: 355 NGFFNQALDMFCHML------------------EFSLIPNGYTMASILEAVSNSKSLKQA 396
            G    A  +   M                   E  ++PN  T+ ++L   +   +  + 
Sbjct: 453 QGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARG 512

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            ++H + ++     D ++ S L+  Y KC  L  S+ V   + ++N +  N L       
Sbjct: 513 KEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMH 572

Query: 457 SCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIF 514
               EA+ L+ R +     + N  TF   L AC+    +++G +    +      +    
Sbjct: 573 GLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPD 632

Query: 515 VESAVIDMYCKCGTIEDAKR 534
           + +  +D+  + G +++A R
Sbjct: 633 LHACAVDILGRAGRLDEAYR 652



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           ++  ++K G   +P +   L+  + +  D   A R++F T + RD++++N LI+G     
Sbjct: 396 VHGYVVKRGMADNPFVQNALMDLYARLGDMD-AARWIFATIEPRDVVSWNTLITGCVVQG 454

Query: 61  QSGPALKLFDRLRYQG------------------LRPDAFTFSSLVKACGSL---QENEI 99
               A +L   ++ QG                  + P+  T  +L+  C  L      + 
Sbjct: 455 HIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKE 514

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +HG  ++    S V + S  ++ YAK G +  +   F      + + +  ++  Y  +G 
Sbjct: 515 IHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGL 574

Query: 160 FDKSKEVFVEM-RSLGLELNEFSLTAVLGA 188
            D++  +F  M  S   + NE +  A L A
Sbjct: 575 GDEAIALFDRMVASDEAKPNEVTFIAALAA 604


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 219/699 (31%), Positives = 348/699 (49%), Gaps = 24/699 (3%)

Query: 63  GPALKLFDRLRYQGLRPDAFT-FSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
           G  LK+ D     G++ + F  F  L+KA G L    +   +HG  LKLG    V +V+ 
Sbjct: 94  GVYLKMLD----DGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNS 149

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLEL 177
            +  Y K G +  A   F    ++D V++  M+ G+  + ++ +S   F  M    G+  
Sbjct: 150 LLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYP 209

Query: 178 NEFS-LTAVLGASF--DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  + ++++L  S    +  G +IHG  VK G    V  +L ++++ +Y++CG   +A  
Sbjct: 210 NRVACVSSILSCSSLQSLTHGREIHGVVVKSGL--DVEEYLVSSLIEMYMKCGSIKNAEN 267

Query: 235 MFDEITEPDVVS-----WSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           +F+ I + D V      W+  I+         +A  LF  +     + +  TM++L S  
Sbjct: 268 IFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLC 327

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  GKQI    +K G    + +  AL+ MY KCG +     IF      + + W+
Sbjct: 328 SESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWS 387

Query: 347 SMIAGYSENGFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           ++I+  +++G   +AL++F    +E  L  +G  +A +L A S+     + MQ+H    K
Sbjct: 388 AVISNCAQSGCPTKALELFYEFKMEDGLADSGILVA-VLRACSSLTLKPEGMQIHGLATK 446

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            GF+ D  + S L+  Y KC  +  SK+V   + +K+ V  NAL S      C  EAL+ 
Sbjct: 447 MGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKA 506

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +R +       N  T + +L  CA ++ +   K +H   ++      + V +++I  Y K
Sbjct: 507 FRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAK 566

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG I  +   F K+   +   WN++++G   H    E+  LF+KM   G+KPD +T+ A+
Sbjct: 567 CGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAI 626

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C HAG V E   Y   M +   L PQLE Y C+VDLLGR G L  A   I  MP  P
Sbjct: 627 LSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTP 686

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           D  IW SLL +C  +G+  L  +  + + +L P +    VLL+NLY + G   +  K+R 
Sbjct: 687 DDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRS 746

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           E+K+  L K+PG SWI V    H F AGD SHSQS EIY
Sbjct: 747 EIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIY 785



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/577 (28%), Positives = 282/577 (48%), Gaps = 28/577 (4%)

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFS----LTAVLGASFDVKEGEQIHGFGVKVGFLS 209
           Y  +G FD +  V+++M   G+++ EF     L    G   DV +G QIHG  +K+G L 
Sbjct: 83  YTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLD 142

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKD 266
            V   + N+++ +Y +CG   DAV+MF+++ E D+VSW+  I+    + D   +   F+ 
Sbjct: 143 DV--SVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRS 200

Query: 267 LRFNDFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + + +F I  N    ++ + S    + L  G++I     K G      + ++LI MY KC
Sbjct: 201 MVW-EFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKC 259

Query: 325 GQVNDARSIFDYLIFKDSVS-----WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           G + +A +IF+ ++ KDSV      WN MI+GY  NG F+QAL +F  M+ + + P+  T
Sbjct: 260 GSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYST 319

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           M S+    S S  +    Q+H  I K G   +  + + L+  Y KC  +    ++     
Sbjct: 320 MVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQ 379

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
             N +  +A+ S    + C  +ALEL+          +      VL+AC+++T   +G  
Sbjct: 380 NHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQ 439

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           IH LA K  +  D+FV SA++D+Y KC  +  +K+ F ++ +  L  WNA++ GYAQ  C
Sbjct: 440 IHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDEC 499

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG---LVREARTYLSCMSDLHGLIPQLE 616
             E    F  M    ++P+ +T   +L+ C H     L +E   YL       GL   + 
Sbjct: 500 ADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLI----RQGLGSTVL 555

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE- 675
               ++    + G +  +  T ++MP   D   W S++    ++   D  ++   K++  
Sbjct: 556 VSNSLIATYAKCGDINSSLYTFEKMPERNDVS-WNSIILGMGMHSRTDEMIVLFDKMVAS 614

Query: 676 -LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            ++PD+ +   +LS   + AG  ++  K  K M E F
Sbjct: 615 GIKPDHVTFTAILSAC-SHAGRVDEGCKYFKSMVEDF 650



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/579 (25%), Positives = 274/579 (47%), Gaps = 27/579 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K G   D  +  +L++ + K      A +        D++++N +ISG  +  
Sbjct: 130 QIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSM 189

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
               +L  F  + ++ G+ P+     S + +C SLQ       +HGV +K G     YLV
Sbjct: 190 DYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLV 249

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVA-----YTAMVCGYVWNGEFDKSKEVFVEMR 171
           S  IE Y K G I +AE  F   LD D+V      +  M+ GYV NG F ++  +F++M 
Sbjct: 250 SSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMM 309

Query: 172 SLGLELN---EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
             G++ +     SL ++   S D+  G+QIHG   K G  + +   +  A++++Y++CG 
Sbjct: 310 VWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNI--RVETALLDMYLKCGD 367

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSS 285
               +K+F      +++ WS  I+         +A  LF + +  D   +   ++ +L +
Sbjct: 368 MGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRA 427

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                +   G QI     K+GF+  V +G+AL+ +Y KC  +  ++ +F  L  KD VSW
Sbjct: 428 CSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSW 487

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N++I+GY+++   ++AL  F  M    + PN  T+A IL   ++   +    +VH ++I+
Sbjct: 488 NALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIR 547

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G      + + LI TY KC  +N S     ++ ++N V  N++   +   S   E + L
Sbjct: 548 QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVL 607

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-----KAIHCLALKARYDQDIFVESAVI 520
           +  +  S  + +  TF+ +L AC+    +++G       +    LK + +Q     + ++
Sbjct: 608 FDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQ----YTCMV 663

Query: 521 DMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           D+  + G +  A      + C      W +++     HG
Sbjct: 664 DLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHG 702



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 141/265 (53%), Gaps = 20/265 (7%)

Query: 342 SVSW-NSMIAGYSENGFFNQALDMFCHML-------EFSLIPNGYTMASILEAVSNSKSL 393
           SVS+ N++I  Y+E+GFF+ A+ ++  ML       EF   P       +++A      +
Sbjct: 72  SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFP------CLIKAFGGLCDV 125

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            +  Q+H H++K G L D S+++ L+T Y KC  + ++ ++  ++ + + V  N + S  
Sbjct: 126 YKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGF 185

Query: 454 VYASCHAEALELYRT-IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
             +  +  +L  +R+ +W      N       + +C+++  L  G+ IH + +K+  D +
Sbjct: 186 QKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVE 245

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKI-----CRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            ++ S++I+MY KCG+I++A+  F  I      R +   WN M+ GY  +GC+ +   LF
Sbjct: 246 EYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLF 305

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHA 592
            KM  +G+KPD  T +++ + C  +
Sbjct: 306 IKMMVWGIKPDYSTMVSLFSLCSES 330


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 191/573 (33%), Positives = 306/573 (53%), Gaps = 12/573 (2%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           SL ++L  S   K   QIH   +    LS     L N ++NLY +CG     + +F   +
Sbjct: 32  SLNSLLNCSRTSKHATQIHSQLITTALLS--LPFLFNNLLNLYAKCGSVDQTLLLFS--S 87

Query: 241 EPD----VVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            PD    VVSW+  I          +A   F  +R +    N YT   +LS+        
Sbjct: 88  APDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASV 147

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q+ +  +K GF+  V + +AL+ MY KC  +  A  +F+ +  ++ VSWN+MI G+ 
Sbjct: 148 HGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFL 207

Query: 354 ENGFFNQALDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           +N  ++QA+  F  +L  +L   +  + +S+  A +N+ +L+   QVH   +K G     
Sbjct: 208 QNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV 267

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + L   YGKC   N+  ++ S    ++ V  N +    VY   + +A   +  +   
Sbjct: 268 YINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRK 327

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               + +++S VL +CA +  L QG  IH   +++ + +++ V S++I MY KCG++ DA
Sbjct: 328 GSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDA 387

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            + F +    ++  W A++    QHG  + V  LF +M + G+KPD IT+++VL++C H 
Sbjct: 388 FQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT 447

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G V E   Y + M  +HG+ P  EHYACIVDLL R G L+ AK  I+ MPI PDA +W +
Sbjct: 448 GRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGA 507

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LLSAC  + N+ +G     KL +L+PDN   YVLL N+    GM N+  ++R++M+   +
Sbjct: 508 LLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGV 567

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
            KEPG SWI +   T+ F   D SH ++KEIY+
Sbjct: 568 RKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYE 600



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 232/455 (50%), Gaps = 29/455 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT---QNRDIITYNALISGLA 57
           QI+S LI       P L   L++ + K     +    LF +    +++++++ +LI+ L 
Sbjct: 48  QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTL-LLFSSAPDDSKNVVSWTSLITQLT 106

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVY 114
           RF +   AL  F+ +R  G+ P+ +TFS+++ AC     +   E +H +  K GF + V+
Sbjct: 107 RFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVF 166

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +VS  ++ YAK  +++ AE  F +    + V++  M+ G++ N  +D++   F   ++L 
Sbjct: 167 VVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFF---KTLL 223

Query: 175 LE----LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           LE    L+E S ++V  A   + +++ G+Q+HG  +K+G  + V  ++NN++ ++Y +CG
Sbjct: 224 LENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV--YINNSLSDMYGKCG 281

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMIN 281
              D  K+F      DVV+W+  I A        D   +F +   +R      +E +  +
Sbjct: 282 LFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWM---MRRKGSIPDEASYSS 338

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L S      L  G  I     + GF++ + + ++LI+MY KCG + DA  IF+    ++
Sbjct: 339 VLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRN 398

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V W ++IA   ++G  N  +++F  ML   + P+  T  S+L A S++  +++     +
Sbjct: 399 VVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFN 458

Query: 402 HIIK-SGFLLDDSMISCLITTYGKCNALNESKRVL 435
            +IK  G        +C++    +   L+ +KR +
Sbjct: 459 SMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFI 493



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 246/541 (45%), Gaps = 42/541 (7%)

Query: 83  TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD- 141
           + +SL+    + +    +H   +     S  +L +  +  YAK G +    + F    D 
Sbjct: 32  SLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDD 91

Query: 142 -LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQ 197
             + V++T+++          K+   F  MR  G+  N ++ +AVL A  D      GEQ
Sbjct: 92  SKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQ 151

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           +H    K GFL+ V   + +A++++Y +C   L A K+F+E+   ++VSW+  I      
Sbjct: 152 MHSLVWKHGFLAEV--FVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQN 209

Query: 258 V---EAFGLFKDLRFNDFQ-INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               +A   FK L   +   ++E +  ++ S+      L  GKQ+     K+G   +V I
Sbjct: 210 KLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYI 269

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
            N+L  MYGKCG  ND   +F     +D V+WN MI  Y  N  +  A + F  M     
Sbjct: 270 NNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGS 329

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           IP+  + +S+L + +N  +L Q   +H+ II+SGF+ +  + S LIT Y KC +L ++ +
Sbjct: 330 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 389

Query: 434 VLSEIDKKNAVHINALASVLVYASC--HAEA---LELYRTIWGSCREVNGSTFSIVLKAC 488
           +  E + +N V   A     + A+C  H  A   +EL+  +     + +  TF  VL AC
Sbjct: 390 IFEETEDRNVVCWTA-----IIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSAC 444

Query: 489 AAMTDLEQG-----KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRD 542
           +    +E+G       I    +   ++      + ++D+  + G ++ AKR    +  + 
Sbjct: 445 SHTGRVEEGFFYFNSMIKVHGIYPGHEH----YACIVDLLSRAGELDRAKRFIELMPIKP 500

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFN----KMSKFGVKPDEI-TYLAVLTSCCHAGLVRE 597
             + W A++     H      SNL       +  F ++PD    Y+ +       G++ E
Sbjct: 501 DASVWGALLSACRNH------SNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNE 554

Query: 598 A 598
           A
Sbjct: 555 A 555



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 196/410 (47%), Gaps = 11/410 (2%)

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           + + +L S +   R  +   QI +       + +  + N L+++Y KCG V+    +F  
Sbjct: 28  HPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSS 87

Query: 337 LI--FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
                K+ VSW S+I   +      +AL  F HM    + PN YT +++L A +++ +  
Sbjct: 88  APDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASV 147

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              Q+HS + K GFL +  ++S L+  Y KC  +  +++V  E+  +N V  N +    +
Sbjct: 148 HGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFL 207

Query: 455 YASCHAEALELYRT-IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
               + +A+  ++T +  +   ++  +FS V  ACA   +LE GK +H +ALK      +
Sbjct: 208 QNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLV 267

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           ++ +++ DMY KCG   D  + F       +  WN M+M Y  +  Y +  N F  M + 
Sbjct: 268 YINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRK 327

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G  PDE +Y +VL SC +   + +  T +       G +  L   + ++ +  + G L  
Sbjct: 328 GSIPDEASYSSVLHSCANLAALYQG-TLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVD 386

Query: 634 AKMTIDQMPIPPDAHI--WQSLLSACTIYGNIDLGLLAGSKLLE--LQPD 679
           A    ++     D ++  W ++++AC  +G+ +  +    ++L   ++PD
Sbjct: 387 AFQIFEET---EDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPD 433



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 175/368 (47%), Gaps = 24/368 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL+ K+G   +  + + L+  + K  D   A +   +   R+++++N +I G  +  
Sbjct: 151 QMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNK 210

Query: 61  QSGPALKLFDRLRYQGLRP-DAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
               A+  F  L  + L   D  +FSS+  AC   G+L+  + VHGV LKLG  + VY+ 
Sbjct: 211 LYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYIN 270

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +   + Y K G        F +    D V +  M+  YV+N  ++ +   F  MR  G  
Sbjct: 271 NSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSI 330

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +E S ++VL +  ++    +G  IH   ++ GF+  +   + ++++ +Y +CG  +DA 
Sbjct: 331 PDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNL--RVASSLITMYAKCGSLVDAF 388

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+E  + +VV W+  IAA      A     LF+ +     + +  T +++LS+     
Sbjct: 389 QIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACS--- 445

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDARSIFDYLIFK-DSV 343
               G+  + F Y    ++V  I         ++ +  + G+++ A+   + +  K D+ 
Sbjct: 446 --HTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDAS 503

Query: 344 SWNSMIAG 351
            W ++++ 
Sbjct: 504 VWGALLSA 511


>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 206/651 (31%), Positives = 335/651 (51%), Gaps = 21/651 (3%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++   K+G +  A   F      + VA+T+ V G   NG  + + E+F +M   G+ LN+
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 180 FSLTAVLGASFDV-----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           F+  A L A         + GEQ+H   V+ GF+      + + ++ LY RCG    A  
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAW--VGSCLVELYARCGSTRAAEA 153

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKD----LRFNDFQINEYTMINLLSSVGGER 290
           +   +  PDVV+++  ++A C   E FG+  +    +  +    NE+T+ ++L++     
Sbjct: 154 VLARMESPDVVAYTSLVSALCRSGE-FGMAAEALGQMMGHGVMPNEHTVTSILAACCP-- 210

Query: 291 ILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            L  G QI  +  K +GF + V   + L+  Y + G+ + A+++FD L  K+ V+W +M+
Sbjct: 211 -LVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMM 269

Query: 350 AGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
             +  +G    AL +F  M+   ++ PN +  +  L A    +S+    Q+HS  IK G 
Sbjct: 270 QLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGAC---ESIALGSQLHSLAIKHGL 326

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + + L++ YG+   + + + +   I+  + V   A  S         +A+ L   
Sbjct: 327 ASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSR 386

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       N   FS VL +CA +  L+QG+  HCLALK   D      +A+I+MY KCG 
Sbjct: 387 MHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQ 446

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I  A+ AF  +    +  WN+++ G+AQHG    V   F++M   G +P+E T L VL +
Sbjct: 447 IVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAA 506

Query: 589 CCHAGLVREARTYL-SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           C HAGLV E   +  S M+ L+G      HYAC+VD+LGR G  + A   I++MP  P  
Sbjct: 507 CNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGV 566

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W++LL++C ++GN++ G LA  KL+EL   + ++YVL+S ++A  G W D   +R+ M
Sbjct: 567 LVWKTLLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRM 626

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
            E  + KE G SW+ V    H F A D SH  S  IY+ L +L + M  TA
Sbjct: 627 DEAGVRKEAGRSWVEVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMRDTA 677



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 227/453 (50%), Gaps = 13/453 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + L+  + +    R A   L   ++ D++ Y +L+S L R  
Sbjct: 118 QVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSG 177

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLK-LGFSSRVYLVSGF 119
           + G A +   ++   G+ P+  T +S++ AC  L     +HG  +K +GFS  VY  S  
Sbjct: 178 EFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVLGVQIHGYMIKAMGFSQSVYTSSTL 237

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELN 178
           ++ Y+++GE   A+  F +    + V +  M+  ++ +G  + + ++F EM S G +  N
Sbjct: 238 VDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPN 297

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLDAVKMF 236
           EF+ +  LGA   +  G Q+H   +K G  S +   ++NA++++Y R G  Q+L+A  MF
Sbjct: 298 EFAFSIALGACESIALGSQLHSLAIKHGLASHL--RVSNALLSMYGRIGLVQQLEA--MF 353

Query: 237 DEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             I +PD+VSW+  I+A      G +A  L   +       N+Y   ++LSS     +L 
Sbjct: 354 RGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLD 413

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q      K+G       GNALI+MY KCGQ+  AR  FD +  +D  SWNS+I G++
Sbjct: 414 QGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHA 473

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS--GFLLD 411
           ++G  +  L  F  M      PN  T+  +L A +++  + + +      +    G  L 
Sbjct: 474 QHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLT 533

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               +C++   G+    +++  ++ E+  +  V
Sbjct: 534 PPHYACMVDMLGRSGRFDDALCLIEEMPFEPGV 566



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 237/511 (46%), Gaps = 24/511 (4%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL-- 94
           LFD   R +++ + + +SGL R  +   A ++F  +   G+  + F  ++ + AC +   
Sbjct: 51  LFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGP 110

Query: 95  ---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
              +  E VH + ++ GF    ++ S  +E YA+ G   +AE         D VAYT++V
Sbjct: 111 GALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLV 170

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVK-VGFLSG 210
                +GEF  + E   +M   G+  NE ++T++L A   +  G QIHG+ +K +GF   
Sbjct: 171 SALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVLGVQIHGYMIKAMGFSQS 230

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDL 267
           V  + ++ +++ Y R G+   A  +FD +   +VV+W   +     DG   +A  LF ++
Sbjct: 231 V--YTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEM 288

Query: 268 RFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
                   NE+       ++G    +  G Q+ +   K G    + + NAL+SMYG+ G 
Sbjct: 289 ISEGVVSPNEFA---FSIALGACESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGL 345

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           V    ++F  +   D VSW + I+ Y +NG   +A+ +   M    L PN Y  +S+L +
Sbjct: 346 VQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSS 405

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++   L Q  Q H   +K G  +     + LI  Y KC  +  ++     +D ++    
Sbjct: 406 CADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSW 465

Query: 447 NALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           N+L   +   + H E    L+ +  +  +  E N ST   VL AC     +++G A    
Sbjct: 466 NSL---IHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRS 522

Query: 504 ALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           A+   Y   +     + ++DM  + G  +DA
Sbjct: 523 AMAGLYGTFLTPPHYACMVDMLGRSGRFDDA 553


>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 206/651 (31%), Positives = 335/651 (51%), Gaps = 21/651 (3%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++   K+G +  A   F      + VA+T+ V G   NG  + + E+F +M   G+ LN+
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 180 FSLTAVLGASFDV-----KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           F+  A L A         + GEQ+H   V+ GF+      + + ++ LY RCG    A  
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAW--VGSCLVELYARCGSTRAAEA 153

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFGLFKD----LRFNDFQINEYTMINLLSSVGGER 290
           +   +  PDVV+++  ++A C   E FG+  +    +  +    NE+T+ ++L++     
Sbjct: 154 VLARMESPDVVAYTSLVSALCRSGE-FGMAAEALGQMMGHGVMPNEHTVTSILAACCP-- 210

Query: 291 ILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            L  G QI  +  K +GF + V   + L+  Y + G+ + A+++FD L  K+ V+W +M+
Sbjct: 211 -LVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMM 269

Query: 350 AGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
             +  +G    AL +F  M+   ++ PN +  +  L A    +S+    Q+HS  IK G 
Sbjct: 270 QLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGAC---ESIALGSQLHSLAIKHGL 326

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + + L++ YG+   + + + +   I+  + V   A  S         +A+ L   
Sbjct: 327 ASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSR 386

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       N   FS VL +CA +  L+QG+  HCLALK   D      +A+I+MY KCG 
Sbjct: 387 MHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQ 446

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I  A+ AF  +    +  WN+++ G+AQHG    V   F++M   G +P+E T L VL +
Sbjct: 447 IVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAA 506

Query: 589 CCHAGLVREARTYL-SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           C HAGLV E   +  S M+ L+G      HYAC+VD+LGR G  + A   I++MP  P  
Sbjct: 507 CNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGV 566

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W++LL++C ++GN++ G LA  KL+EL   + ++YVL+S ++A  G W D   +R+ M
Sbjct: 567 LVWKTLLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRM 626

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
            E  + KE G SW+ V    H F A D SH  S  IY+ L +L + M  TA
Sbjct: 627 DEAGVRKEAGRSWVEVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMRDTA 677



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 227/453 (50%), Gaps = 13/453 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + L+  + +    R A   L   ++ D++ Y +L+S L R  
Sbjct: 118 QVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSG 177

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLK-LGFSSRVYLVSGF 119
           + G A +   ++   G+ P+  T +S++ AC  L     +HG  +K +GFS  VY  S  
Sbjct: 178 EFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVLGVQIHGYMIKAMGFSQSVYTSSTL 237

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELN 178
           ++ Y+++GE   A+  F +    + V +  M+  ++ +G  + + ++F EM S G +  N
Sbjct: 238 VDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPN 297

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLDAVKMF 236
           EF+ +  LGA   +  G Q+H   +K G  S +   ++NA++++Y R G  Q+L+A  MF
Sbjct: 298 EFAFSIALGACESIALGSQLHSLAIKHGLASHL--RVSNALLSMYGRIGLVQQLEA--MF 353

Query: 237 DEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             I +PD+VSW+  I+A      G +A  L   +       N+Y   ++LSS     +L 
Sbjct: 354 RGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLD 413

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q      K+G       GNALI+MY KCGQ+  AR  FD +  +D  SWNS+I G++
Sbjct: 414 QGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHA 473

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS--GFLLD 411
           ++G  +  L  F  M      PN  T+  +L A +++  + + +      +    G  L 
Sbjct: 474 QHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLT 533

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
               +C++   G+    +++  ++ E+  +  V
Sbjct: 534 PPHYACMVDMLGRSGRFDDALCLIEEMPFEPGV 566



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 237/511 (46%), Gaps = 24/511 (4%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL-- 94
           LFD   R +++ + + +SGL R  +   A ++F  +   G+  + F  ++ + AC +   
Sbjct: 51  LFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGP 110

Query: 95  ---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
              +  E VH + ++ GF    ++ S  +E YA+ G   +AE         D VAYT++V
Sbjct: 111 GALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLV 170

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVK-VGFLSG 210
                +GEF  + E   +M   G+  NE ++T++L A   +  G QIHG+ +K +GF   
Sbjct: 171 SALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVLGVQIHGYMIKAMGFSQS 230

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDL 267
           V  + ++ +++ Y R G+   A  +FD +   +VV+W   +     DG   +A  LF ++
Sbjct: 231 V--YTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEM 288

Query: 268 RFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
                   NE+       ++G    +  G Q+ +   K G    + + NAL+SMYG+ G 
Sbjct: 289 ISEGVVSPNEFA---FSIALGACESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGL 345

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           V    ++F  +   D VSW + I+ Y +NG   +A+ +   M    L PN Y  +S+L +
Sbjct: 346 VQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSS 405

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++   L Q  Q H   +K G  +     + LI  Y KC  +  ++     +D ++    
Sbjct: 406 CADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSW 465

Query: 447 NALASVLVYASCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCL 503
           N+L   +   + H E    L+ +  +  +  E N ST   VL AC     +++G A    
Sbjct: 466 NSL---IHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRS 522

Query: 504 ALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           A+   Y   +     + ++DM  + G  +DA
Sbjct: 523 AMAGLYGTFLTPPHYACMVDMLGRSGRFDDA 553


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 179/566 (31%), Positives = 301/566 (53%), Gaps = 10/566 (1%)

Query: 194 EGEQIHGFGVKVGFLS--GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +G  +HG+ VK GF +   VCN    A+++ Y +  +  DA+ +FDE+ + D++SW+  I
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCN----ALISFYAKSNRIEDALMVFDEMPQRDIISWNSII 57

Query: 252 AA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
              A +G+  +A  LF  +     +++  T+++++ +         G  +  +  + G +
Sbjct: 58  GGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLI 117

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
              S+GNAL+ MY  C        IF  +  K+ VSW +MI  Y+  G F++   +F  M
Sbjct: 118 SETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEM 177

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               + P+ + + S L+A + ++SLK    VH + I++G      + + L+  Y KC  +
Sbjct: 178 GLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYM 237

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E++ +   + KK+ +  N L      ++   EA  L+  +    R  N  T + +L A 
Sbjct: 238 EEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRP-NAVTMACILPAA 296

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A+++ LE+G+ +H  A++  Y +D FV +A++DMY KCG +  A+R F  +   +L  W 
Sbjct: 297 ASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWT 356

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
            M+ GY  HG   +   LF +M   G++PD  ++ A+L +C H+GL  E   + + M + 
Sbjct: 357 IMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNE 416

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           H + P+L+HYAC+VDLL   G L+ A   I+ MPI PD+ IW SLL  C I+ N+ L   
Sbjct: 417 HRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEK 476

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
               + EL+P+N   YVLL+N+YA A  W  V KL+ ++  + L +  G SWI V G  H
Sbjct: 477 VAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAH 536

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHM 754
            F+A + +H Q   I + L  +   M
Sbjct: 537 IFFAENRNHPQGMRIAEFLDDVARRM 562



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 235/441 (53%), Gaps = 10/441 (2%)

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           +VHG  +K GF ++  + +  I  YAKS  I  A M F +    D +++ +++ G   NG
Sbjct: 5   VVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNG 64

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
            +DK+ E+FV M   G EL+  +L +V+ A         G  +HG+ V+ G +S     L
Sbjct: 65  LYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS--L 122

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDF 272
            NA++++Y  C       K+F  + + +VVSW+  I +   A    +  GLF+++     
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + + + + + L +  G   L+ GK +  +  + G  EV+ + NAL+ MY KCG + +AR 
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           IFD++  KD++SWN++I GYS +   N+A  +F  ML   L PN  TMA IL A ++  S
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSS 301

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L++  ++H++ ++ G+L D+ + + L+  Y KC AL  ++R+   +  KN +    + + 
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQ 511
                   +A+ L+  + GS  + +  +FS +L AC+     ++G +  + +  + R + 
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 512 DIFVESAVIDMYCKCGTIEDA 532
            +   + ++D+ C  G +++A
Sbjct: 422 KLKHYACMVDLLCHTGNLKEA 442



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 12/398 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  L+K G      +   LIS + K      A     +   RDII++N++I G A    
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSG 118
              A++LF R+  +G   D+ T  S++ AC     +    +VHG  ++ G  S   L + 
Sbjct: 66  YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+   +  S    FR+    + V++TAM+  Y   G FDK   +F EM   G+  +
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            F++T+ L A   +  +K G+ +HG+ ++ G    +   + NA+M +YV+CG   +A  +
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVL--PVANALMEMYVKCGYMEEARFI 243

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD +T+ D +SW+  I          EAF LF ++     + N  TM  +L +      L
Sbjct: 244 FDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSL 302

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+++ A+  + G++E   + NAL+ MY KCG +  AR +FD L  K+ +SW  MIAGY
Sbjct: 303 ERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGY 362

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +G    A+ +F  M    + P+  + ++IL A S+S
Sbjct: 363 GMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHS 400



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 51/91 (56%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++  ++ G+  D  ++  L+  + K      A R      N+++I++  +I+G     
Sbjct: 307 EMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHG 366

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   A+ LF++++  G++PDA +FS+++ AC
Sbjct: 367 RGRDAIALFEQMKGSGIQPDAGSFSAILYAC 397


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 181/555 (32%), Positives = 292/555 (52%), Gaps = 15/555 (2%)

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVK----MFDEITEPDVVSWSERIAAAC------DGVE 259
           G+C+  +N ++N+ +RC            +F +I +P++  W+  I          D +E
Sbjct: 41  GLCH--DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
            +GL   +R   F  N +T   +L +      L+ G +I     K GF   V +  +L+ 
Sbjct: 99  FYGL---MRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVC 155

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           +Y KCG + DA  +FD +  K+ VSW ++I+GY   G F +A+DMF  +LE +L P+ +T
Sbjct: 156 LYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFT 215

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           +  +L A +    L     +H  I++ G + +  + + L+  Y KC  + +++ V   + 
Sbjct: 216 IVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           +K+ V   A+           EA++L+  +     + +  T   VL ACA +  LE G+ 
Sbjct: 276 EKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEW 335

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +  L  +  +  +  + +A+ID+Y KCG++  A   F+ +       WNA++ G A +G 
Sbjct: 336 VSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGY 395

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
                 LF ++ K G+KPD  T++ +L  C HAGLV E R Y + M     L P +EHY 
Sbjct: 396 VKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYG 455

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           C+VDLLGR GLL+ A   I  MP+  +A +W +LL AC I+ +  L  LA  +L+EL+P 
Sbjct: 456 CMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPW 515

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
           N   YVLLSN+Y++   W++  K+R  M EK + K PG SWI V G  H F  GD  H  
Sbjct: 516 NSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPL 575

Query: 740 SKEIYKELIKLYEHM 754
           S++IY +L +L + M
Sbjct: 576 SEKIYAKLDELTKKM 590



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 221/427 (51%), Gaps = 16/427 (3%)

Query: 36  RFLF-DTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           RFLF   +  +I  +N +I GL        A++ +  +R +G  P+ FTF  ++KAC  L
Sbjct: 66  RFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARL 125

Query: 95  QENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
            + ++   +H + +K GF   V++ +  +  YAK G +  A   F D  D + V++TA++
Sbjct: 126 LDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAII 185

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFL 208
            GY+  G+F ++ ++F  +  + L  + F++  VL A     D+  GE IH   +++G +
Sbjct: 186 SGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMV 245

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFK 265
             V   +  +++++Y +CG    A  +FD + E D+VSW   I   A +G+  EA  LF 
Sbjct: 246 RNV--FVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFL 303

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            ++  + + + YT++ +LS+      L  G+ +     +  F+    +G ALI +Y KCG
Sbjct: 304 QMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCG 363

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            ++ A  +F  +  KD V WN++I+G + NG+   +  +F  + +  + P+G T   +L 
Sbjct: 364 SMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLC 423

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEID-KKN 442
             +++  + +  +  + + +  F L  S+    C++   G+   L+E+ +++  +  + N
Sbjct: 424 GCTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEAN 482

Query: 443 AVHINAL 449
           A+   AL
Sbjct: 483 AIVWGAL 489



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 178/363 (49%), Gaps = 15/363 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L++K G   D  + T+L+  + K      A +   D  +++++++ A+ISG     
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   A+ +F RL    L PD+FT   ++ AC   G L   E +H   +++G    V++ +
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGT 252

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G +  A   F    + D V++ AM+ GY  NG   ++ ++F++M+   ++ 
Sbjct: 253 SLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKP 312

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + +++  VL A      ++ GE + G   +  FL      L  A+++LY +CG    A +
Sbjct: 313 DCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPV--LGTALIDLYAKCGSMSRAWE 370

Query: 235 MFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + E D V W+  I+  A +G    +FGLF  +     + +  T I LL       +
Sbjct: 371 VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGL 430

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           +  G++     Y+  F    SI +   ++ + G+ G +++A  +   +  + +++ W ++
Sbjct: 431 VDEGRRYFNSMYRF-FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGAL 489

Query: 349 IAG 351
           +  
Sbjct: 490 LGA 492


>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 209/741 (28%), Positives = 372/741 (50%), Gaps = 67/741 (9%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ---GLRPDAFTFSSLVKA 90
           + + + ++ ++D++ YN L++ L R  +   +L+LF ++       ++PD +  S+ +  
Sbjct: 10  SLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAV 69

Query: 91  CGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           C + ++      +HG  ++ G     ++ +  +  YAK  + VS +  F++    D  ++
Sbjct: 70  CANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSW 129

Query: 148 TAMVC-----GYV-----------------WNGEFDKSKE---------VFVEMRSLGLE 176
           T ++      G++                 WN     S E          F EM  +G++
Sbjct: 130 TTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVK 189

Query: 177 LNEFSLTAVLGASFDVKE----GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            + +S   +L  S   KE    G Q+H   +K G+L      + NA++ +Y       DA
Sbjct: 190 PDNYSFACIL--SLCTKEIEDLGRQVHSSVIKAGYLRK--TSVVNALITMYFSIENLEDA 245

Query: 233 VKMFDEITEPDV---VSWSERIAAACDGV-------EAFGLFKDLRFNDFQINEYTMINL 282
            ++F E TE +V   ++++  I    DG+       EA  +FKD++       E T +++
Sbjct: 246 YEVF-EGTESEVRDQITYNVMI----DGLVCVRRNEEALIMFKDMKRACLSPTELTFVSI 300

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +SS     I++  +Q+ +   K+GF     +GN+ I+MY  CG+   A ++F  LI KD 
Sbjct: 301 MSSCS---IIQVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDL 357

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +SWN++I+ Y +  F   A+  F  M    + P+ +T  S+L     S+ ++    VH++
Sbjct: 358 ISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGV---SEFIEIVEMVHAY 414

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           + K+G +L   +++ L++ Y KC  + +S +V SEI+ KN +  N +    +      +A
Sbjct: 415 VYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQA 474

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           LE +  +  S  + +  T SIVL  CA ++ L+ GK IH   L++    +  + + +I M
Sbjct: 475 LEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITM 534

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEIT 581
           Y KCG +  + R F  +    +  WN+++  YAQHG   E  + F  M     + PD+ T
Sbjct: 535 YSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQAT 594

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +  +L++C HAGLV EA   L  M   +  +P ++  +CIVDL+GR G ++ A+  I+  
Sbjct: 595 FTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESA 654

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
                 H+W +L SAC  + N+ LG +    LLE + DN S YV+LSN+YASAG W +  
Sbjct: 655 QYGEHTHVWWALFSACAAHENLRLGRIVARILLEKERDNPSVYVVLSNIYASAGCWEEAA 714

Query: 702 KLRKEMKEKFLCKEPGYSWIH 722
            +R+ +K+    K+PG SWI 
Sbjct: 715 NVRELIKKTGSMKQPGCSWIR 735



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 235/454 (51%), Gaps = 11/454 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLAR 58
           Q++S +IK G+     +   LI+ +    +   A+     T++  RD ITYN +I GL  
Sbjct: 212 QVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVC 271

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
             ++  AL +F  ++   L P   TF S++ +C  +Q  + VH   +KLGF S   + + 
Sbjct: 272 VRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQVAQQVHSQAIKLGFESFTLVGNS 331

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV-FVEMRSLGLEL 177
            I  Y   GE  +A   F+  ++ D +++ A++  YV  G F KS  + F++M+  G+  
Sbjct: 332 TITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYV-QGNFGKSAVLAFLQMQRTGIGP 390

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +EF+  ++LG S  ++  E +H +  K G +  +   + NA+++ Y +C +   ++++F 
Sbjct: 391 DEFTFGSLLGVSEFIEIVEMVHAYVYKNGLILII--EILNALVSAYAKCRKVKQSLQVFS 448

Query: 238 EITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           EI   +++SW+  I     +G  ++A   F  L  +  + + +T+  +LS       L  
Sbjct: 449 EINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDI 508

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQI  +  + G     S+ N LI+MY KCG +  +   F+ +I +D VSWNS+I+ Y++
Sbjct: 509 GKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQ 568

Query: 355 NGFFNQALDMFCHMLEF-SLIPNGYTMASILEAVSNSKSLKQAMQVHS-HIIKSGFLLDD 412
           +G   +A+D F  M +  S++P+  T  +IL A S++  +++A Q+    +I    +   
Sbjct: 569 HGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSV 628

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
             +SC++   G+   +++++ V+         H+
Sbjct: 629 DQLSCIVDLIGRSGYIDQAESVIESAQYGEHTHV 662



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 256/527 (48%), Gaps = 20/527 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGL 77
           TTL+S  TK      A   +FD   + ++  +NA+I+G A       A+  F  +   G+
Sbjct: 130 TTLLSACTKMGHIEYASE-MFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGV 188

Query: 78  RPDAFTFSSLVKACGSLQEN--EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
           +PD ++F+ ++  C    E+    VH   +K G+  +  +V+  I  Y     +  A   
Sbjct: 189 KPDNYSFACILSLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEV 248

Query: 136 FR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
           F   +    D + Y  M+ G V     +++  +F +M+   L   E +  +++ +   ++
Sbjct: 249 FEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQ 308

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
             +Q+H   +K+GF S     + N+ + +Y  CG+   A  +F  + E D++SW+  I++
Sbjct: 309 VAQQVHSQAIKLGFESFTL--VGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISS 366

Query: 254 ACDGVEAFGLFKDLRFNDFQ-----INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
              G   FG    L F   Q      +E+T  +LL   G    +   + + A+ YK G +
Sbjct: 367 YVQG--NFGKSAVLAFLQMQRTGIGPDEFTFGSLL---GVSEFIEIVEMVHAYVYKNGLI 421

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
            ++ I NAL+S Y KC +V  +  +F  +  K+ +SWN++I G+  NG   QAL+ F  +
Sbjct: 422 LIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKL 481

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +   L P+ +T++ +L   +N  +L    Q+H +I++SG   + S+ + LIT Y KC  L
Sbjct: 482 IMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLL 541

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKA 487
             S R  + + +++ V  N++ S         EA++ ++ +      + + +TF+ +L A
Sbjct: 542 GWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSA 601

Query: 488 CAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           C+    +E+  + +  + +  R    +   S ++D+  + G I+ A+
Sbjct: 602 CSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAE 648



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 174/396 (43%), Gaps = 43/396 (10%)

Query: 230 LDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFN---DFQINEYTMINLL 283
           ++++K   E    D++ ++  +A    +   +++  LF  +  +   + + + Y +   L
Sbjct: 8   MNSLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTL 67

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC------------------- 324
           +     R +  G Q+  +  + G      + N ++S+Y K                    
Sbjct: 68  AVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVY 127

Query: 325 ------------GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
                       G +  A  +FD +   +   WN+MI G +E+G    A++ F  M +  
Sbjct: 128 SWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMG 187

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           + P+ Y+ A IL ++   +      QVHS +IK+G+L   S+++ LIT Y     L ++ 
Sbjct: 188 VKPDNYSFACIL-SLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAY 246

Query: 433 RVL--SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
            V   +E + ++ +  N +   LV    + EAL +++ +  +C      TF  ++ +C+ 
Sbjct: 247 EVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSI 306

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           +   +Q   +H  A+K  ++    V ++ I MY  CG  + A   F+ +    L  WNA+
Sbjct: 307 IQVAQQ---VHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAI 363

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           +  Y Q          F +M + G+ PDE T+ ++L
Sbjct: 364 ISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLL 399



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 35/198 (17%)

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS-CREVNGSTF--S 482
           +A+N S + ++E   ++ +  N L + L  +S + ++L+L+  I  S C  +    +  S
Sbjct: 6   HAMN-SLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLS 64

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC---------------- 526
             L  CA   D+  G  +H  A+++       V + V+ +Y K                 
Sbjct: 65  TTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKP 124

Query: 527 ---------------GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
                          G IE A   F  + + ++A WNAM+ G A+ G      N F +M 
Sbjct: 125 DVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMH 184

Query: 572 KFGVKPDEITYLAVLTSC 589
           K GVKPD  ++  +L+ C
Sbjct: 185 KMGVKPDNYSFACILSLC 202


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 193/648 (29%), Positives = 348/648 (53%), Gaps = 21/648 (3%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  +A S  +  A   F +    D   +  M+ G+   G + ++ + +  M   G++ + 
Sbjct: 71  LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130

Query: 180 FS----LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           F+    + +V G S  ++EG++IH   +K+GF+S V  ++ N++++LY++ G   DA K+
Sbjct: 131 FTYPFVIKSVAGIS-SLEEGKKIHAMVIKLGFVSDV--YVCNSLISLYMKLGCAWDAEKV 187

Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+E+ E D+VSW+  I+   A  DG  +  LFK++    F+ + ++ ++ L +       
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247

Query: 293 RAGKQIQAFCYKV-GFMEV--VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           + GK+I   C+ V   +E   V +  +++ MY K G+V+ A  IF+ +I ++ V+WN MI
Sbjct: 248 KMGKEIH--CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305

Query: 350 AGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
             Y+ NG    A   F  M E + L P+  T  ++L A     ++ +   +H + ++ GF
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGF 361

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           L    + + LI  YG+C  L  ++ +   + +KN +  N++ +  V    +  ALEL++ 
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +W S    + +T + +L A A    L +G+ IH   +K+RY  +  + ++++ MY  CG 
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +EDA++ F  I    +  WN+++M YA HG       LF++M    V P++ T+ ++L +
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C  +G+V E   Y   M   +G+ P +EHY C++DL+GR G    AK  +++MP  P A 
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW SLL+A   + +I +   A  ++ +++ DN   YVLL N+YA AG W DV +++  M+
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            K + +    S +   G +H F  GD SH  + +IY E++ +   MV 
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY-EVLDVVSRMVG 708



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 279/537 (51%), Gaps = 27/537 (5%)

Query: 14  DPILSTTLISHFTKFADFR---RAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLF 69
           DP L+  L      FAD R    A + LFD  N+ D   +N +I G         A++ +
Sbjct: 64  DPALTRAL----RGFADSRLMEDALQ-LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFY 118

Query: 70  DRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
            R+ + G++ D FT+  ++K+     SL+E + +H + +KLGF S VY+ +  I  Y K 
Sbjct: 119 SRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL 178

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G    AE  F +  + D V++ +M+ GY+  G+   S  +F EM   G + + FS  + L
Sbjct: 179 GCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238

Query: 187 GAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
           GA    +  K G++IH   V+    +G    +  +I+++Y + G+   A ++F+ + + +
Sbjct: 239 GACSHVYSPKMGKEIHCHAVRSRIETGDV-MVMTSILDMYSKYGEVSYAERIFNGMIQRN 297

Query: 244 VVSWSERIAA-ACDG--VEAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           +V+W+  I   A +G   +AF  F+ +   N  Q +  T INLL +      +  G+ I 
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIH 353

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
            +  + GF+  + +  ALI MYG+CGQ+  A  IFD +  K+ +SWNS+IA Y +NG   
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
            AL++F  + + SL+P+  T+ASIL A + S SL +  ++H++I+KS +  +  +++ L+
Sbjct: 414 SALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLV 473

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y  C  L ++++  + I  K+ V  N++            ++ L+  +  S    N S
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKS 533

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
           TF+ +L AC+    +++G   +  ++K  Y  D  +E    ++D+  + G    AKR
Sbjct: 534 TFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 225/449 (50%), Gaps = 16/449 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++++IK G   D  +  +LIS + K      A +   +   RDI+++N++ISG     
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
               +L LF  +   G +PD F+  S + AC  +   ++      H V  ++  +  V +
Sbjct: 211 DGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE-TGDVMV 269

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-G 174
           ++  ++ Y+K GE+  AE  F   +  + VA+  M+  Y  NG    +   F +M    G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           L+ +  +   +L AS  + EG  IHG+ ++ GFL  +   L  A++++Y  CGQ   A  
Sbjct: 330 LQPDVITSINLLPAS-AILEGRTIHGYAMRRGFLPHMV--LETALIDMYGECGQLKSAEV 386

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD + E +V+SW+  IAA         A  LF++L  +    +  T+ ++L +      
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G++I A+  K  +     I N+L+ MY  CG + DAR  F++++ KD VSWNS+I  
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ +GF   ++ +F  M+   + PN  T AS+L A S S  + +  + +   +K  + +D
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGID 565

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
             +    C++   G+    + +KR L E+
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 129/278 (46%), Gaps = 14/278 (5%)

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           ++D  ++  +  +     + ++ ++  E++K +A   N +         + EA++ Y  +
Sbjct: 62  VNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +  + +  T+  V+K+ A ++ LE+GK IH + +K  +  D++V +++I +Y K G  
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA++ F ++    +  WN+M+ GY   G       LF +M K G KPD  + ++ L +C
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEH-----YACIVDLLGRVGLLEGAKMTIDQMPIP 644
            H    +  +  + C    H +  ++E         I+D+  + G +  A+   + M I 
Sbjct: 242 SHVYSPKMGKE-IHC----HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQ 295

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLE---LQPD 679
            +   W  ++      G +    L   K+ E   LQPD
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD 333


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 222/727 (30%), Positives = 356/727 (48%), Gaps = 76/727 (10%)

Query: 60  CQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
           C++   LK+F R L  QGL  D  T + LV     L   E        L F+  V+    
Sbjct: 42  CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE-------SLSFAKEVF---- 90

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             EN    G       CF          Y +++ GY  +G  +++  +F+ M + G+  +
Sbjct: 91  --ENSESYG------TCF---------MYNSLIRGYASSGLCNEAILLFLRMMNSGISPD 133

Query: 179 EFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +++    L A    +    G QIHG  VK+G+   +   + N++++ Y  CG+   A K+
Sbjct: 134 KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL--FVQNSLVHFYAECGELDSARKV 191

Query: 236 FDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           FDE++E +VVSW+  I        A D V+ F  F+ +R  +   N  TM+ ++S+    
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLF--FRMVRDEEVTPNSVTMVCVISACAKL 249

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+++ AF    G      + +AL+ MY KC  ++ A+ +FD     +    N+M 
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y   G   +AL +F  M++  + P+  +M S + + S  +++      H +++++GF 
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369

Query: 410 LDDSMISCLITTYGKCNALNESKRVLS---------------------EID--------- 439
             D++ + LI  Y KC+  + + R+                       E+D         
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429

Query: 440 -KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN--GSTFSIVLKACAAMTDLEQ 496
            +KN V  N + S LV  S   EA+E++ ++  S   VN  G T   +  AC  +  L+ 
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSM-QSQEGVNADGVTMMSIASACGHLGALDL 488

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
            K I+    K     D+ + + ++DM+ +CG  E A   F  +    ++ W A +   A 
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
            G       LF+ M + G+KPD + ++  LT+C H GLV++ +     M  LHG+ P+  
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY C+VDLLGR GLLE A   I+ MP+ P+  IW SLL+AC + GN+++   A  K+  L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
            P+   +YVLLSN+YASAG WND+ K+R  MKEK L K PG S I + G TH F +GD S
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728

Query: 737 HSQSKEI 743
           H +   I
Sbjct: 729 HPEMPNI 735



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 249/531 (46%), Gaps = 53/531 (9%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--NEI-VHGVCL 105
           YN+LI G A       A+ LF R+   G+ PD +TF   + AC   +   N I +HG+ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K+G++  +++ +  +  YA+ GE+ SA   F +  + + V++T+M+CGY        + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 166 VFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           +F  M R   +  N  ++  V+ A     D++ GE+++ F    G    V + + +A+++
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVD 279

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV------EAFGLFKDLRFNDFQIN 275
           +Y++C     A ++FDE    ++   +   A A + V      EA G+F  +  +  + +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCN---AMASNYVRQGLTREALGVFNLMMDSGVRPD 336

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
             +M++ +SS    R +  GK    +  + GF    +I NALI MY KC + + A  IFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396

Query: 336 YLIFKDSVSWNSMIAGYSENG-------------------------------FFNQALDM 364
            +  K  V+WNS++AGY ENG                                F +A+++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456

Query: 365 FCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           FC M  +  +  +G TM SI  A  +  +L  A  ++ +I K+G  LD  + + L+  + 
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           +C     +  + + +  ++     A    +  A     A+EL+  +     + +G  F  
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576

Query: 484 VLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
            L AC+    ++QGK I    L L     +D+     ++D+  + G +E+A
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY-GCMVDLLGRAGLLEEA 626



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           IY  + KNG  LD  L TTL+  F++  D   A        NRD+  + A I  +A    
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL 107
           +  A++LFD +  QGL+PD   F   + AC   G +Q+ + +    LKL
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600


>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
 gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 653

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 185/572 (32%), Positives = 307/572 (53%), Gaps = 11/572 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           D   G+QIHGF V+ GFL         +++N+Y +CG    AV +F   +E DV  ++  
Sbjct: 75  DYVSGQQIHGFMVRKGFLDD-SPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNAL 132

Query: 251 IAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I+    +G  ++A   ++++R N    ++YT  +LL        L   K++    +K+GF
Sbjct: 133 ISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGF 191

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSENGFFNQALDMFC 366
                +G+ L++ Y K   V DA+ +FD L  +D SV WN+++ GYS+   F  AL +F 
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M E  +  + +T+ S+L A + S  +     +H   +K+G   D  + + LI  YGK  
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            L E+  +   +D+++    N++  V  Y   H   L L+  +  S    +  T + VL 
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371

Query: 487 ACAAMTDLEQGKAIH----CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            C  +  L QG+ IH       L  R   + F+ ++++DMY KCG + DA+  F  +   
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
             A WN M+ GY    C     ++F+ M + GVKPDEIT++ +L +C H+G + E R +L
Sbjct: 432 DSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFL 491

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + M  ++ ++P  +HYAC++D+LGR   LE A       PI  +  +W+S+LS+C ++GN
Sbjct: 492 AQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGN 551

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
            DL L+AG +L EL+P++   YVL+SN+Y  AG + +V  +R  M+++ + K PG SWI 
Sbjct: 552 KDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIV 611

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +    H F+ G+ +H + K I+  L  +  HM
Sbjct: 612 LKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 227/446 (50%), Gaps = 18/446 (4%)

Query: 1   QIYSLLIKNGHHLD-PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           QI+  +++ G   D P   T+L++ + K    RRA   +F    RD+  YNALISG    
Sbjct: 81  QIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAV-LVFGGSERDVFGYNALISGFVVN 139

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--VHGVCLKLGFSSRVYLVS 117
                A++ +  +R  G+ PD +TF SL+K   +++ +++  VHG+  KLGF S  Y+ S
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGS 199

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           G + +Y+K   +  A+  F +  D D+ V + A+V GY     F+ +  VF +MR  G+ 
Sbjct: 200 GLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVG 259

Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  ++T+VL A   S D+  G  IHG  VK G  S +   ++NA++++Y +     +A 
Sbjct: 260 VSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV--VSNALIDMYGKSKWLEEAN 317

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+ + E D+ +W+  +       D      LF+ +  +  + +  T+  +L + G   
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377

Query: 291 ILRAGKQIQAFCYKVGFMEVVS----IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            LR G++I  +    G +   S    I N+L+ MY KCG + DAR +FD +  KDS SWN
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            MI GY        ALDMF  M    + P+  T   +L+A S+S  L +     + +   
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497

Query: 407 GFLLDDS-MISCLITTYGKCNALNES 431
             +L  S   +C+I   G+ + L E+
Sbjct: 498 YNILPTSDHYACVIDMLGRADKLEEA 523



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 180/377 (47%), Gaps = 16/377 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRD-IITYNALISGLARF 59
           +++ L  K G   D  + + L++ ++KF     A +   +  +RD  + +NAL++G ++ 
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLV 116
            +   AL +F ++R +G+     T +S++ A    G +     +HG+ +K G  S + + 
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y KS  +  A   F    + D   + +++C + + G+ D +  +F  M   G+ 
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLD 231
            +  +LT VL   G    +++G +IHG+ +  G L+   ++  ++N++M++YV+CG   D
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420

Query: 232 AVKMFDEITEPDVVSWSERI----AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A  +FD +   D  SW+  I      +C G  A  +F  +     + +E T + LL +  
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSC-GELALDMFSCMCRAGVKPDEITFVGLLQACS 479

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSI-FDYLIFKDSVSW 345
               L  G+   A    V  +   S   A +I M G+  ++ +A  +     I  + V W
Sbjct: 480 HSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVW 539

Query: 346 NSMIAGYSENGFFNQAL 362
            S+++    +G  + AL
Sbjct: 540 RSILSSCRLHGNKDLAL 556



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 20/314 (6%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRV 434
           N  T  + L+  +  K      Q+H  +++ GFL D     + L+  Y KC  +  +  V
Sbjct: 59  NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
                +++    NAL S  V      +A+E YR +  +    +  TF  +LK   AM +L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-EL 176

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMG 553
              K +H LA K  +D D +V S ++  Y K  ++EDA++ F ++  RD    WNA++ G
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y+Q   + +   +F+KM + GV     T  +VL++   +G +   R+       +HGL  
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS-------IHGLAV 289

Query: 614 QLEHYACIV------DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           +    + IV      D+ G+   LE A    + M    D   W S+L      G+ D  L
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGTL 348

Query: 668 LAGSKLL--ELQPD 679
               ++L   ++PD
Sbjct: 349 ALFERMLCSGIRPD 362


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 182/567 (32%), Positives = 303/567 (53%), Gaps = 9/567 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP--DVVSWS 248
            +K   QIH   V     + + N   N ++ LY +CG     + +F+    P  +VV+W+
Sbjct: 112 SLKHATQIHSQLVTTNNHASLAN--INTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWT 169

Query: 249 ---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
               +++ +    +A   F  +R      N +T   +L +     +L  G+QI A  +K 
Sbjct: 170 TLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKH 229

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
            F+    +  AL+ MY KCG +  A ++FD +  ++ VSWNSMI G+ +N  + +A+ +F
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             +L  SL P+  +++S+L A +    L    QVH  I+K G +    + + L+  Y KC
Sbjct: 290 REVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
               ++ ++      ++ V  N +           +A   ++ +     E + +++S + 
Sbjct: 348 GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLF 407

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            A A++  L QG  IH   LK  + ++  + S+++ MY KCG++ DA + FR+    ++ 
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W AM+  + QHGC +E   LF +M   GV P+ IT+++VL++C H G + +   Y + M
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +++H + P LEHYAC+VDLLGRVG LE A   I+ MP  PD+ +W +LL AC  + N+++
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEM 587

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G     +L +L+PDN   Y+LLSN+Y   GM  +  ++R+ M    + KE G SWI V  
Sbjct: 588 GREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKN 647

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYE 752
            T  F A D SHS+++EIY  L KL E
Sbjct: 648 RTFVFNANDRSHSRTQEIYGMLQKLKE 674



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 228/455 (50%), Gaps = 26/455 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT---QNRDIITYNALISGLA 57
           QI+S L+   +H       TL+  + K          LF+T    + +++T+  LI+ L+
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTL-LLFNTYPHPSTNVVTWTTLINQLS 176

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
           R  +   AL  F+R+R  G+ P+ FTFS+++ AC     L E + +H +  K  F +  +
Sbjct: 177 RSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPF 236

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  ++ YAK G ++ AE  F +    + V++ +M+ G+V N  + ++  VF E+ SLG
Sbjct: 237 VATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG 296

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            +  + S+++VL A   + E   G+Q+HG  VK G +  V  ++ N+++++Y +CG   D
Sbjct: 297 PD--QVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLV--YVKNSLVDMYCKCGLFED 352

Query: 232 AVKMFDEITEPDVVSWSERIAAA--CDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+F    + DVV+W+  I     C   E A   F+ +     + +E +  +L  +   
Sbjct: 353 ATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASAS 412

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G  I +   K G ++   I ++L++MYGKCG + DA  +F      + V W +M
Sbjct: 413 IAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAM 472

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-----VHSHI 403
           I  + ++G  N+A+ +F  ML   ++P   T  S+L A S++  +    +      + H 
Sbjct: 473 ITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHN 532

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           IK G        +C++   G+   L E+ R +  +
Sbjct: 533 IKPGL----EHYACMVDLLGRVGRLEEACRFIESM 563



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 20/273 (7%)

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +FS +P+   +  +L   +  KSLK A Q+HS ++ +      + I+ L+  Y KC +++
Sbjct: 93  QFSSVPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIH 149

Query: 430 ESKRVLSEIDKK--NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
            +  + +       N V    L + L  ++   +AL  +  +  +    N  TFS +L A
Sbjct: 150 HTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPA 209

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA    L +G+ IH L  K  +  D FV +A++DMY KCG++  A+  F ++   +L  W
Sbjct: 210 CAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSW 269

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N+M++G+ ++  Y     +F ++   G  PD+++  +VL++C  AGLV      L     
Sbjct: 270 NSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSAC--AGLVE-----LDFGKQ 320

Query: 608 LH------GLIPQLEHYACIVDLLGRVGLLEGA 634
           +H      GL+  +     +VD+  + GL E A
Sbjct: 321 VHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDA 353


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 189/639 (29%), Positives = 335/639 (52%), Gaps = 38/639 (5%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y KSG +  A   F   ++   V +T ++ GY    +F ++ E+FV+M+  G E + 
Sbjct: 85  ISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDY 144

Query: 180 FSLTAVLGASFDVKEGEQIHGFG---VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +   +L      + G QI       +K+G+ S +   + N +++ Y +           
Sbjct: 145 VTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLI--VGNTLVDSYCK----------- 191

Query: 237 DEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
                      S R+  AC       LFK++     +I+ +T   +L +  G   +  G+
Sbjct: 192 -----------SNRLDLACQ------LFKEMP----EIDSFTFAAVLCANIGLDDIVLGQ 230

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           QI +F  K  F+  V + NAL+  Y K   V DAR +FD +  +D VS+N +I+GY+ +G
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 290

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
               A D+F  +   +     +  A++L   SN+   +   Q+H+  I +    +  + +
Sbjct: 291 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 350

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
            L+  Y KC    E++ + + +  ++AV   A+ S  V    + E L+L+  +  +    
Sbjct: 351 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 410

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           + +TF+ +L+A A++  L  GK +H   +K+ +  ++F  SA++D+Y KCG+I+DA + F
Sbjct: 411 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 470

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
           +++   ++  WNAM+  YAQ+G        F +M   G++PD +++L VL++C H+GLV 
Sbjct: 471 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 530

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E   + + M+ ++ L P+ EHYA +VD+L R G    A+  + +MPI PD  +W S+L+A
Sbjct: 531 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590

Query: 657 CTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           C I+ N +L   A  +L  ++   + + YV +SN+YA+AG W +V K+ K M+++ + K 
Sbjct: 591 CRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKL 650

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           P YSW+ +   TH F A D  H Q +EI K++  L + M
Sbjct: 651 PAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTM 689



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 168/654 (25%), Positives = 291/654 (44%), Gaps = 111/654 (16%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I + ++K G   D   S   + +F K  +  +A +      +++ ++ N +ISG  +   
Sbjct: 34  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93

Query: 62  SGPALKLFD-------------------------------RLRYQGLRPDAFTFSSLVKA 90
            G A KLFD                               +++  G  PD  TF +L+  
Sbjct: 94  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153

Query: 91  C-GSLQENEI--VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           C G    N+I  V    +KLG+ SR+ + +  +++Y KS  +  A   F++  ++D+  +
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF 213

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGF 207
            A++C                   ++GL+              D+  G+QIH F +K  F
Sbjct: 214 AAVLCA------------------NIGLD--------------DIVLGQQIHSFVIKTNF 241

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLF 264
           +  V   ++NA+++ Y +    +DA K+FDE+ E D VS++  I+  A DG    AF LF
Sbjct: 242 VWNV--FVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           ++L+F  F   ++    +LS          G+QI A          + +GN+L+ MY KC
Sbjct: 300 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 359

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G+  +A  IF  L  + +V W +MI+ Y + GF+ + L +F  M + S+I +  T AS+L
Sbjct: 360 GKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLL 419

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A ++  SL    Q+HS IIKSGF+ +    S L+  Y KC ++ ++ +   E+  +N V
Sbjct: 420 RASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIV 479

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
             NA+ S           L+ ++ +  S  + +  +F  VL AC+    +E+G   H  +
Sbjct: 480 SWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG-LWHFNS 538

Query: 505 LKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
           +   Y  D   E  ++V+DM C+ G   +A++                            
Sbjct: 539 MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKL--------------------------- 571

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVREARTYLSCMSDLHGLIP 613
                  M++  + PDEI + +VL +C    +  L R A   L  M +L    P
Sbjct: 572 -------MAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP 618



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 174/364 (47%), Gaps = 21/364 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S +IK     +  +S  L+  ++K      A +   +   +D ++YN +ISG A   
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 290

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A  LF  L++       F F++++    +  + E+   +H   +     S + + +
Sbjct: 291 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN 350

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G+   AEM F +      V +TAM+  YV  G +++  ++F +MR   +  
Sbjct: 351 SLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 410

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +  ++L AS  +     G+Q+H F +K GF+S V +   +A++++Y +CG   DAV+
Sbjct: 411 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS--GSALLDVYAKCGSIKDAVQ 468

Query: 235 MFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F E+ + ++VSW+  I+A     EA      FK++  +  Q +  + + +LS+     +
Sbjct: 469 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 528

Query: 292 LRAG-----KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSW 345
           +  G        Q +          S+    + M  + G+ N+A  +  +  I  D + W
Sbjct: 529 VEEGLWHFNSMTQIYKLDPRREHYASV----VDMLCRSGRFNEAEKLMAEMPIDPDEIMW 584

Query: 346 NSMI 349
           +S++
Sbjct: 585 SSVL 588



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 187/419 (44%), Gaps = 23/419 (5%)

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           K  R N  Q N  ++ +L S    +  L     I A   K GF    S  N  +  + K 
Sbjct: 2   KPFRPNALQ-NLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKN 60

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G+++ AR +F+ +  K++VS N MI+GY ++G   +A  +F  M+E + +    T   ++
Sbjct: 61  GELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAV----TWTILI 116

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL---NESKRVLSEIDKK 441
              S     K+A ++   + + G   D       +T    CN     N+  +V ++I K 
Sbjct: 117 GGYSQLNQFKEAFELFVQMQRCGTEPD---YVTFVTLLSGCNGHEMGNQITQVQTQIIKL 173

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
                  + + LV + C +  L+L   ++    E++  TF+ VL A   + D+  G+ IH
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIH 233

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
              +K  +  ++FV +A++D Y K  ++ DA++ F ++       +N ++ GYA  G + 
Sbjct: 234 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK 293

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHA-----GLVREARTYLSCMSDLHGLIPQLE 616
              +LF ++        +  +  +L+   +      G    A+T ++  +D   L+    
Sbjct: 294 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT-ADSEILVGN-- 350

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
               +VD+  + G  E A+M    +     A  W +++SA    G  + GL   +K+ +
Sbjct: 351 ---SLVDMYAKCGKFEEAEMIFTNL-THRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 405



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI++  I      + ++  +L+  + K   F  A     +  +R  + + A+IS   +  
Sbjct: 332 QIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKG 391

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
           F + G  L+LF+++R   +  D  TF+SL++A  S   L   + +H   +K GF S V+ 
Sbjct: 392 FYEEG--LQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  ++ YAK G I  A   F++  D + V++ AM+  Y  NGE + + + F EM   GL
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +  S   VL A   S  V+EG        ++  L     H   +++++  R G+  +A
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHY-ASVVDMLCRSGRFNEA 568

Query: 233 VKMFDEIT-EPDVVSWSERIAA 253
            K+  E+  +PD + WS  + A
Sbjct: 569 EKLMAEMPIDPDEIMWSSVLNA 590


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 188/547 (34%), Positives = 284/547 (51%), Gaps = 5/547 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           N ++N+Y +  +   A  +        VV+W+  IA +        A   F ++R +  Q
Sbjct: 46  NHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQ 105

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N++T      + G  R    GKQ+ A   K G +  V +G +   MY K G   +AR +
Sbjct: 106 PNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKM 165

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  ++  +WN+ ++     G ++ AL  F         PN  T  + L A + +  L
Sbjct: 166 FDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYL 225

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           +   Q+H  +++SGF  D S+ + LI  YGKC+ +  S+ + S I K N V   ++    
Sbjct: 226 RLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSY 285

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
           V      +A  ++        E      S VL ACA ++ LE GK++H LA+KA    +I
Sbjct: 286 VQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNI 345

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-- 571
           FV SA++DMY KCG+IEDA+RAF ++   +L  WNAM+ GYA  G       LF++M+  
Sbjct: 346 FVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCG 405

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
              V P+ +T++ VL++C  AG V         M   +G+ P  EHYAC+VDLLGR G++
Sbjct: 406 SHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMV 465

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           E A   I +MPI P   +W +LL A  ++G  +LG +A   L EL P +   +VLLSN++
Sbjct: 466 EQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMF 525

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A+AG W +   +RKEMK+  + K  G SWI  G   H F A D+SH ++ EI   L KL 
Sbjct: 526 AAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLR 585

Query: 752 EHMVATA 758
             M A  
Sbjct: 586 GEMEAAG 592



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 213/439 (48%), Gaps = 16/439 (3%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           L++ ++K      A   L  T NR ++T+ ALI+G  +  +   AL  F  +R   ++P+
Sbjct: 48  LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107

Query: 81  AFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            FTF    KA GSL+   +   VH + +K G  S V++     + Y+K+G    A   F 
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL----GASFDVK 193
           +  + +   + A +   V  G +D +   F+E R  G E N  +  A L    GAS+ ++
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASY-LR 226

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G Q+HGF ++ GF + V   + N +++ Y +C Q   +  +F  I++P+ VSW   I +
Sbjct: 227 LGRQLHGFVLQSGFEADV--SVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVS 284

Query: 254 ACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                E   A  +F   R    +  ++ + ++LS+  G  +L  GK +     K   +  
Sbjct: 285 YVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGN 344

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML- 369
           + +G+AL+ MYGKCG + DA   FD +  ++ V+WN+MI GY+  G  + A+ +F  M  
Sbjct: 345 IFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTC 404

Query: 370 -EFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNA 427
               + PN  T   +L A S + S+   M++  S   + G        +C++   G+   
Sbjct: 405 GSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGM 464

Query: 428 LNESKRVLSEIDKKNAVHI 446
           + ++ + + ++  +  V +
Sbjct: 465 VEQAYQFIKKMPIRPTVSV 483



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 250/538 (46%), Gaps = 46/538 (8%)

Query: 77  LRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLV-------SGFIEN-----YA 124
           L P+  + +SLV++  S Q        C +LG ++   ++         FI N     Y+
Sbjct: 4   LSPN--SLASLVESAVSTQ--------CSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYS 53

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K     SA++      +   V +TA++ G V NG F  +   F  MR   ++ N+F+   
Sbjct: 54  KLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPC 113

Query: 185 VLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
              AS  ++    G+Q+H   VK G +S V   +  +  ++Y + G   +A KMFDE+ E
Sbjct: 114 AFKASGSLRSPLVGKQVHALAVKAGQISDV--FVGCSAFDMYSKAGLTEEARKMFDEMPE 171

Query: 242 PDVVSWSERIA-AACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            ++ +W+  ++ +  +G   +A   F + R   ++ N  T    L++  G   LR G+Q+
Sbjct: 172 RNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQL 231

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             F  + GF   VS+ N LI  YGKC QV  +  IF  +   + VSW SMI  Y +N   
Sbjct: 232 HGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEE 291

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +A  +F    +  + P  + ++S+L A +    L+    VH+  +K+  + +  + S L
Sbjct: 292 EKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSAL 351

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW-GSCR-EV 476
           +  YGKC ++ +++R   E+ ++N V  NA+     +      A+ L+  +  GS R   
Sbjct: 352 VDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAP 411

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
           N  TF  VL AC+    +  G  I   +++ RY  +   E  + V+D+  + G +E A +
Sbjct: 412 NYVTFVCVLSACSRAGSVNVGMEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQ 470

Query: 535 AFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
             +K+  R +++ W A++            S +F K     V  D +  L  L S  H
Sbjct: 471 FIKKMPIRPTVSVWGALL----------GASKMFGKSELGKVAADNLFELDPLDSGNH 518



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 195/411 (47%), Gaps = 12/411 (2%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           I N L++MY K  + N A+ +      +  V+W ++IAG  +NG F  AL  F +M   S
Sbjct: 44  IYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDS 103

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC-LITTYGKCNALNES 431
           + PN +T     +A  + +S     QVH+  +K+G  + D  + C     Y K     E+
Sbjct: 104 IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAG-QISDVFVGCSAFDMYSKAGLTEEA 162

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           +++  E+ ++N    NA  S  V    + +AL  +        E N  TF   L ACA  
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGA 222

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           + L  G+ +H   L++ ++ D+ V + +ID Y KC  +  ++  F  I + +   W +M+
Sbjct: 223 SYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMI 282

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL-VREARTYLSCMSDLHG 610
           + Y Q+    +   +F +  K G++P +    +VL++C  AGL V E    +  ++    
Sbjct: 283 VSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSAC--AGLSVLEVGKSVHTLAVKAC 340

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           ++  +   + +VD+ G+ G +E A+   D+MP   +   W +++      G  D+ +   
Sbjct: 341 VVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAMIGGYAHQGQADMAVTLF 399

Query: 671 SKLL----ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++      + P N  T+V + +  + AG  N   ++ + M+ ++   EPG
Sbjct: 400 DEMTCGSHRVAP-NYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGI-EPG 448



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 172/363 (47%), Gaps = 15/363 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G   D  +  +    ++K      A +   +   R+I T+NA +S      
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL  F   R++G  P+  TF + + AC     L+    +HG  L+ GF + V + +
Sbjct: 189 RYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVAN 248

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y K  ++  +E+ F      ++V++ +M+  YV N E +K+  VF+  R  G+E 
Sbjct: 249 GLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEP 308

Query: 178 NEFSLTAVLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +F +++VL   A   V E G+ +H   VK   +  +   + +A++++Y +CG   DA +
Sbjct: 309 TDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNI--FVGSALVDMYGKCGSIEDAER 366

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQI--NEYTMINLLSSVGGE 289
            FDE+ E ++V+W+  I       +   A  LF ++     ++  N  T + +LS+    
Sbjct: 367 AFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRA 426

Query: 290 RILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNS 347
             +  G +I ++   + G          ++ + G+ G V  A      +  + +VS W +
Sbjct: 427 GSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGA 486

Query: 348 MIA 350
           ++ 
Sbjct: 487 LLG 489


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 200/659 (30%), Positives = 341/659 (51%), Gaps = 21/659 (3%)

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           VH   ++ G S+     +  +  YAK G++  A   F   +  D V++ +++ GY  NG 
Sbjct: 38  VHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 97

Query: 160 FDKSKEV---FVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCN 213
              S  V   F EMR+  +  N ++L  +  A   ++    G Q H   VK+     +  
Sbjct: 98  ISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDI-- 155

Query: 214 HLNNAIMNLYVRCGQKLDAVKM--FDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFND 271
           +++ +++ +Y + G K   +    F    + DV+    ++ ++   +E      D     
Sbjct: 156 YVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLR--RQLKSSICFLEEKEKESD----- 208

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
              ++Y    +LSS+     +  G+QI     K G +  V++ NAL++MY KC  +N+A 
Sbjct: 209 ---SDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEAC 265

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD    ++S++W++M+ GYS+NG   +A+ +F  M    + P+ YT+  +L A S+  
Sbjct: 266 KMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDIC 325

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L +  Q+HS ++K GF       + L+  Y K   L ++++    + +++     +L S
Sbjct: 326 YLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 385

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             V  S + EAL LYR +  +    N  T + VLKAC+++  LE GK +H   +K  +  
Sbjct: 386 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 445

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           ++ + SA+  MY KCG++ED    FR+     +  WNAM+ G + +G   E   LF +M 
Sbjct: 446 EVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML 505

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             G +PD++T++ ++++C H G V    +Y   MSD  GL P+++HYAC+VD+L R G L
Sbjct: 506 AEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQL 565

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           +  K  I+   I     +W+ LLSAC  +GN +LG+ AG KL+ L     STYV L+ +Y
Sbjct: 566 KETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIY 625

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            + G   DV ++ K M+   + KE G SWI +    H F  GD+ H + +E  K+L+ L
Sbjct: 626 TALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEET-KDLVSL 683



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 158/573 (27%), Positives = 273/573 (47%), Gaps = 31/573 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR--- 58
           +++ +I+ G       +  L++ + K     +A         +D++++N+LI+G ++   
Sbjct: 38  VHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 97

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYL 115
              S   ++LF  +R Q + P+A+T + + KA  SLQ   +    H + +K+     +Y+
Sbjct: 98  ISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYV 157

Query: 116 VSGFIENYAKSG--EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            +  +  Y K+G   +      F  C   D +                KS   F+E +  
Sbjct: 158 DTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQL------------KSSICFLEEKEK 205

Query: 174 GLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
             + +++  TAV   L A+  V  G QIHG  VK G L  V   L+NA++ +Y +C    
Sbjct: 206 ESD-SDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVA--LSNALVTMYSKCESLN 262

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A KMFD   + + ++WS  +       + +EA  LF  +     + +EYT++ +L++  
Sbjct: 263 EACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACS 322

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  GKQ+ +F  K+GF   +    AL+ MY K G + DAR  FD L  +D   W S
Sbjct: 323 DICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 382

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I+GY +N    +AL ++  M    +IPN  TMAS+L+A S+  +L+   QVH H IK G
Sbjct: 383 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 442

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           F L+  + S L T Y KC +L +   V      K+ V  NA+ S L +     EALEL+ 
Sbjct: 443 FGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 502

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKC 526
            +     E +  TF  ++ AC+    +E+G +  H ++ +   D  +   + ++D+  + 
Sbjct: 503 EMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRA 562

Query: 527 GTIEDAKRAFRKICRD-SLAGWNAMMMGYAQHG 558
           G +++ K        D  L  W  ++     HG
Sbjct: 563 GQLKETKEFIESASIDHGLCLWRILLSACKNHG 595



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/521 (23%), Positives = 232/521 (44%), Gaps = 32/521 (6%)

Query: 176 ELNEFSLTAVLGASF-------DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           E+N FS T+ L  +        ++  G  +H   ++ G  +  C    N ++N Y +CGQ
Sbjct: 9   EINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTG--TSTCTQHANVLVNFYAKCGQ 66

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD--GVEA----FGLFKDLRFNDFQINEYTMINL 282
              A  +F+ I   DVVSW+  I       G+ +      LF+++R  D   N YT+  +
Sbjct: 67  LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGI 126

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
             +    +    G+Q  A   K+     + +  +L+ MY K G          YL     
Sbjct: 127 FKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG--------LKYLYMVYY 178

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG-YTMASILEAVSNSKSLKQAMQVHS 401
             W      Y ++    Q     C + E     +  Y   ++L +++ +  +    Q+H 
Sbjct: 179 GFW----LCYKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHG 234

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
             +K+G L   ++ + L+T Y KC +LNE+ ++      +N++  +A+ +         E
Sbjct: 235 ITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 294

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           A++L+  ++ +  + +  T   VL AC+ +  L +GK +H   LK  +++ +F  +A++D
Sbjct: 295 AIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVD 354

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY K G + DA++ F  +    +A W +++ GY Q+    E   L+ +M   G+ P++ T
Sbjct: 355 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 414

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
             +VL +C     + E    +   +  HG   ++   + +  +  + G LE   +   + 
Sbjct: 415 MASVLKACSSLATL-ELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRT 473

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDN 680
           P   D   W +++S  +  G  D  L    ++L    +PD+
Sbjct: 474 P-NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDD 513



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 160/295 (54%), Gaps = 13/295 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ + +KNG      LS  L++ ++K      A +    + +R+ IT++A+++G ++  
Sbjct: 231 QIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 290

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           +S  A+KLF R+   G++P  +T   ++ AC     L E + +H   LKLGF   ++  +
Sbjct: 291 ESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATT 350

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             ++ YAK+G +  A   F DCL   +VA +T+++ GYV N + +++  ++  M++ G+ 
Sbjct: 351 ALVDMYAKAGCLADARKGF-DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 409

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N+ ++ +VL A   +     G+Q+HG  +K GF  G+   + +A+  +Y +CG   D  
Sbjct: 410 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYTKCGSLEDGN 467

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
            +F      DVVSW+  I+       G EA  LF+++     + ++ T +N++S+
Sbjct: 468 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISA 522


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 179/546 (32%), Positives = 307/546 (56%), Gaps = 10/546 (1%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQ 273
           NA++  Y +      A  +FD+I +PD+VS++  I A  D    + A  LF ++R     
Sbjct: 78  NALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T   ++++      L   +Q+ +  +  GF   VS+ N+L++ Y K G + +A  +
Sbjct: 138 MDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMV 195

Query: 334 FDYL--IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           F+ +    +D VSWNSMI  Y ++    +AL ++  M+      + +T+AS+L   S  +
Sbjct: 196 FNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVE 255

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALA 450
            L   +Q H+  IK+GF  +  + S LI  Y KC A ++ES++V  EI   + V  N + 
Sbjct: 256 DLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMI 315

Query: 451 SVLVY-ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           S          EALE +R +  +    +  +F   + AC+ ++   QGK  H LA+K+  
Sbjct: 316 SGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEI 375

Query: 510 DQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
             + I V +A++ MY KCG ++DA++ F+++ + +    N+++ GYAQHG   E  NLF 
Sbjct: 376 PSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFE 435

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           +M    + P  IT +++L++C H G V E + Y + M D+ G+ P+ EHY+C++DLLGR 
Sbjct: 436 QMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRA 495

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  A+  ID MP  P +  W +LL AC  YGN++L   A ++ L+L+P N   Y++L+
Sbjct: 496 GKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLA 555

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           ++Y++A  W +  ++RK M+++ + K+PG SWI +    H F A D+SH + KEI+  L 
Sbjct: 556 SMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLD 615

Query: 749 KLYEHM 754
           +++  M
Sbjct: 616 EMFVKM 621



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 224/433 (51%), Gaps = 25/433 (5%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           LI+ + K +    A          D++++N LI+  A    +  AL LF  +R  GL  D
Sbjct: 80  LIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMD 139

Query: 81  AFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
            FTFS ++ AC    G +++   +H +    GF S V + +  +  Y+K+G +  AEM F
Sbjct: 140 GFTFSGVITACCNHVGLIRQ---LHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVF 196

Query: 137 RDCLD--LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---- 190
               +   D V++ +M+  Y  +    K+  ++ +M   G E++ F+L +VL  +F    
Sbjct: 197 NGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL-TTFSCVE 255

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSE 249
           D+  G Q H   +K GF      H+ + ++++Y +CG  + ++ K+F+EI   D+V W+ 
Sbjct: 256 DLSGGLQFHAKAIKTGFNKN--RHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNT 313

Query: 250 RIAAACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
            I+         VEA   F+ ++   +  ++ + +  +S+         GKQ  A   K 
Sbjct: 314 MISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKS 373

Query: 306 GFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
                 +S+ NAL++MY KCG + DAR +F  +   ++V+ NS+IAGY+++G   ++L++
Sbjct: 374 EIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNL 433

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTY 422
           F  ML  S+ P   T+ SIL A +++  +++  + + +++K  F ++      SC+I   
Sbjct: 434 FEQMLAASIAPTSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEPEAEHYSCMIDLL 492

Query: 423 GKCNALNESKRVL 435
           G+   L+E++R++
Sbjct: 493 GRAGKLSEAERLI 505



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 221/463 (47%), Gaps = 25/463 (5%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  I  YAK   I  A   F      D V++  ++  Y   G+   +  +F EMR 
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMRE 133

Query: 173 LGLELNEFSLTAVLGASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +GL ++ F+ + V+ A  + V    Q+H      GF S V   + N+++  Y + G   +
Sbjct: 134 MGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVS--VKNSLLTYYSKNGILEE 191

Query: 232 AVKMFDEITEP--DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           A  +F+ + E   D VSW+  I A      G++A  L++D+    F+I+ +T+ ++L++ 
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTF 251

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ-VNDARSIFDYLIFKDSVSW 345
                L  G Q  A   K GF +   +G+ LI MY KCG  ++++R +F+ +   D V W
Sbjct: 252 SCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVW 311

Query: 346 NSMIAGYSENGFFN-QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           N+MI+GYS+N   + +AL+ F  M      P+  +    + A SN  S  Q  Q H+  +
Sbjct: 312 NTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAM 371

Query: 405 KSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           KS    +  S+ + L+T Y KC  L +++++   + + N V +N++ +         E+L
Sbjct: 372 KSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESL 431

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF-VE------ 516
            L+  +  +       T   +L ACA    +E+GK    +       +DIF +E      
Sbjct: 432 NLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMM------KDIFGIEPEAEHY 485

Query: 517 SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           S +ID+  + G + +A+R    +      A W A++    ++G
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYG 528



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 177/399 (44%), Gaps = 41/399 (10%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            +L S    + L  GK +     K        + N  I +Y KC  +  A   F+     
Sbjct: 13  QILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEP 72

Query: 341 DSVSWNSMIAGYSENG-------FFNQ------------------------ALDMFCHML 369
           +  S+N++IA Y++          F+Q                        AL +F  M 
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  L+ +G+T + ++ A  N   L +  Q+HS    SGF    S+ + L+T Y K   L 
Sbjct: 133 EMGLVMDGFTFSGVITACCNHVGLIR--QLHSLAFSSGFDSYVSVKNSLLTYYSKNGILE 190

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHA--EALELYRTIWGSCREVNGSTFSIVLKA 487
           E++ V + + ++    ++  + ++ Y       +AL LYR +     E++  T + VL  
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT-IEDAKRAFRKICRDSLAG 546
            + + DL  G   H  A+K  ++++  V S +IDMY KCG  + ++++ F +IC   L  
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310

Query: 547 WNAMMMGYAQHGCYH-EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
           WN M+ GY+Q+     E    F +M + G  PD+ +++  +++C +     + + + +  
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370

Query: 606 SDLHGLIP--QLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
             +   IP  Q+     +V +  + G L+ A+    +MP
Sbjct: 371 --MKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 40/223 (17%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +F  +LK+C A  DL  GK++H + LK+      ++ +  I +Y KC  +  A  AF + 
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNK------------------------------ 569
              ++  +NA++  YA+    H   +LF++                              
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 570 -MSKFGVKPDEITYLAVLTSCC-HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            M + G+  D  T+  V+T+CC H GL+R+    L  ++   G    +     ++    +
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQ----LHSLAFSSGFDSYVSVKNSLLTYYSK 185

Query: 628 VGLLEGAKMTIDQMPIP-PDAHIWQSLLSACTIYGNIDLGLLA 669
            G+LE A+M  + M     D   W S++ A   YG    GL A
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVA---YGQHKRGLKA 225


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 177/542 (32%), Positives = 284/542 (52%), Gaps = 40/542 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDF 272
           NA+++ Y + G   D   +FD+++  D VS++  IA      C   +A   F  ++   F
Sbjct: 93  NAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSS-QALEFFVRMQEEGF 151

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +  +YT +++L +      ++ GKQI          E V + NAL +MY KCG ++ AR 
Sbjct: 152 ESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARW 211

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +FD ++ K+ VSWNSMI+GY +NG       +FC M    L+P+  T             
Sbjct: 212 LFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVT------------- 258

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
                                 IS +++ Y +C  ++E+ +   EI +K+ V    +   
Sbjct: 259 ----------------------ISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVG 296

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                   +AL L+R +       +  T S V+ +CA +  L QG+A+H  A+    D D
Sbjct: 297 CAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHD 356

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V SA++DMY KCG   DA   F+++   ++  WN+M++GYAQ+G   E   L+ +M  
Sbjct: 357 LLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLH 416

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             +KPD IT++ VL++C HAGLV   + Y   +S +HG+ P  +HY+C+++LLGR G ++
Sbjct: 417 ENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMD 476

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I  M   P+  IW +LLS C I  +++ G +A   L EL P N   Y++LSN+YA
Sbjct: 477 KAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYA 536

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           + G W DV  +R  MK   + K   YSWI +    H F A D +HS++++IY+EL +L +
Sbjct: 537 ACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIK 596

Query: 753 HM 754
            +
Sbjct: 597 KL 598



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 173/359 (48%), Gaps = 41/359 (11%)

Query: 35  FRFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
            R +FD  +  D ++YN +I+G +    S  AL+ F R++ +G     +T  S++ AC  
Sbjct: 108 LRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQ 167

Query: 94  L---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
           L   +  + +HG  +       V++ +     YAK G +  A   F   ++ + V++ +M
Sbjct: 168 LLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSM 227

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSG 210
           + GY+ NG+ +   ++F EM+S GL  ++ +++ +L A                      
Sbjct: 228 ISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA---------------------- 265

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE-RIAAACDGVE--AFGLFKDL 267
                       Y +CG   +A K F EI E D V W+   +  A +G E  A  LF+++
Sbjct: 266 ------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREM 313

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
              + + + +T+ +++SS      L  G+ +       G    + + +AL+ MY KCG+ 
Sbjct: 314 LLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGET 373

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
            DA  +F  ++ ++ +SWNSMI GY++NG   +AL ++  ML  +L P+  T   +L A
Sbjct: 374 ADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 176/395 (44%), Gaps = 47/395 (11%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  +  Y+KSG +      F      D V+Y  ++ G+  NG   ++ E FV M+ 
Sbjct: 89  VFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQE 148

Query: 173 LGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G E  +++  +VL A     D+K G+QIHG  V       V   + NA+ N+Y +CG  
Sbjct: 149 EGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESV--FVWNALTNMYAKCGAL 206

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +FD +   +VVSW+  I+      +      LF +++ +    ++ T+ N+LS+ 
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA- 265

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                                             Y +CG +++A   F  +  KD V W 
Sbjct: 266 ----------------------------------YFQCGYIDEACKTFREIKEKDKVCWT 291

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M+ G ++NG    AL +F  ML  ++ P+ +T++S++ + +   SL Q   VH   +  
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC--HAEALE 464
           G   D  + S L+  Y KC    ++  V   +  +N +  N++  +L YA      EAL 
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSM--ILGYAQNGKDLEALA 409

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           LY  +     + +  TF  VL AC     +E+G+ 
Sbjct: 410 LYEEMLHENLKPDNITFVGVLSACMHAGLVERGQG 444



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 95/438 (21%), Positives = 182/438 (41%), Gaps = 54/438 (12%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +  + ++S + +      A +   + + +D + +  ++ G A+  +   AL LF  + 
Sbjct: 255 DQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREML 314

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            + +RPD FT SS+V +C    SL + + VHG  +  G    + + S  ++ Y+K GE  
Sbjct: 315 LENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETA 374

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A + F+  L  + +++ +M+ GY  NG+  ++  ++ EM    L+ +  +   VL A  
Sbjct: 375 DAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACM 434

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEIT-EPDVVSW 247
                E+  G+   +  + G+    ++   ++NL  R G    AV +   +T EP+ + W
Sbjct: 435 HAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIW 494

Query: 248 SERIAAA---CD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE-------RILR 293
           S  ++     CD     + A  LF+    +      Y M++ + +  G        R L 
Sbjct: 495 STLLSVCRINCDVNNGEMAARHLFE---LDPHNAGPYIMLSNIYAACGRWKDVAAVRSLM 551

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
              +I+ F         + I N +     +    ++   I++ L        N +I    
Sbjct: 552 KNNKIKKF----AAYSWIEIDNQVHKFVAEDRTHSETEQIYEEL--------NRLIKKLQ 599

Query: 354 ENGFF------------NQALDMFCH-----MLEFSLI--PNGYTMASILEAVSNSKSLK 394
           E+GF              +  D  C+      L F LI  P+G T   I++ +       
Sbjct: 600 ESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCH 659

Query: 395 QAMQVHSHIIKSGFLLDD 412
             M+  S II+   +L D
Sbjct: 660 VFMKFVSKIIRRPIILRD 677



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 111/274 (40%), Gaps = 49/274 (17%)

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHC-LALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
           N  +++ +L  C    D+ Q K +   + L      D F+++ ++ +Y K G + DA+  
Sbjct: 21  NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDL 80

Query: 536 FRKICRDSLAGWNAMMMGYAQ-------------------------------HGCYHEVS 564
           F K+ R  +  WNAM+  Y++                               +GC  +  
Sbjct: 81  FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQAL 140

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI------PQLEHY 618
             F +M + G +  + T+++VL +C     ++  +        +HG I        +  +
Sbjct: 141 EFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGK-------QIHGRIVATSLGESVFVW 193

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLEL 676
             + ++  + G L+ A+   D+M +  +   W S++S     G  +    L    +   L
Sbjct: 194 NALTNMYAKCGALDQARWLFDRM-VNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGL 252

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            PD  +   +LS  Y   G  ++  K  +E+KEK
Sbjct: 253 MPDQVTISNILS-AYFQCGYIDEACKTFREIKEK 285


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 194/611 (31%), Positives = 327/611 (53%), Gaps = 14/611 (2%)

Query: 105  LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
            +K G    VY+ +  ++ Y K G +  A   F      D V++ A++CGY  NG    + 
Sbjct: 469  IKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSAL 528

Query: 165  EVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
            E+FV+M  LG    + +L  +L +   ++   +G+ IHGFG+K G    +   + NA+ +
Sbjct: 529  ELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGL--HLDPQVKNALTS 586

Query: 222  LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYT 278
            +Y +CG    A  +F+E+ +  VVSW+  I A   +G   EA  +FK +     ++++ T
Sbjct: 587  MYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVT 646

Query: 279  MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
            +++L S+          + I  +  KVG  +  S+  +LI MY + G  + A  ++  L 
Sbjct: 647  IMSLPSANANP------ESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLP 700

Query: 339  FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
             K+ VS  ++I  Y+E G     ++ F  M + ++ P+   M SIL  +++   +     
Sbjct: 701  QKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHV 760

Query: 399  VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
             H + IKSG    + + + LI+ Y K N +     + S + +K  +  N++ S  V A  
Sbjct: 761  FHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGR 820

Query: 459  HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
             + A+EL+  +       +  T + +L  C+ +  L+ G+ +H   L+ + + + FV +A
Sbjct: 821  ASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTA 880

Query: 519  VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
            +I MY KCG+I  A+R F+ I +  LA WNAM+ GY+ +G  H+    +++M + GV+PD
Sbjct: 881  LIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPD 940

Query: 579  EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
            +IT+L VL +C H GL+ E R Y   M+ ++ ++P L+H AC+V LL RVGL E A + I
Sbjct: 941  KITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFI 1000

Query: 639  DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
              M   PD+ +W + LSAC I+  + LG     KL  L   N   YVL+SNLYA  G W+
Sbjct: 1001 KNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWD 1060

Query: 699  DVGKLRKEMKE 709
            DV ++R+ MK+
Sbjct: 1061 DVARVREMMKD 1071



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 151/604 (25%), Positives = 265/604 (43%), Gaps = 60/604 (9%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            QI + LIK G      +ST L+  + K      A         RD++++NALI G +R  
Sbjct: 463  QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
                AL+LF ++   G  P   T   L+ +CG L+   + + +HG  +K G      + +
Sbjct: 523  YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                 YAK G++ +AE  F + +D   V++  M+  Y  NG FD++  VF  M   G+E+
Sbjct: 583  ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642

Query: 178  NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
            ++ ++ ++  A+ +    E IH + +KVG        +  +++ +Y R G    A  ++ 
Sbjct: 643  SQVTIMSLPSANANP---ESIHCYTIKVGLADDAS--VVTSLICMYARYGSTDHAELLYW 697

Query: 238  EITEPDVVSWSERIAAACDG------VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
             + + ++VS +  I +  +       +E+F     L   + + +   M+++L  +     
Sbjct: 698  SLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQL---NMKPDSVAMLSILHGIADPVH 754

Query: 292  LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            +  G     +  K G      + N LISMY K   V     +F  +  K  +SWNS+I+G
Sbjct: 755  ICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISG 814

Query: 352  YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
              + G  + A+++FC M      P+  T+AS+L   S    L+   ++HS+I+++   ++
Sbjct: 815  CVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEME 874

Query: 412  DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            D + + LI  Y KC ++  ++RV   I K      NA+ S         +AL  Y  +  
Sbjct: 875  DFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQE 934

Query: 472  SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM-----YCKC 526
               E +  TF  VL AC     + +G+         RY Q   + + V DM     +C C
Sbjct: 935  QGVEPDKITFLGVLAACTHGGLIHEGR---------RYFQ---IMTKVYDMVPTLQHCAC 982

Query: 527  GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
                                   M+   A+ G + E       M K   +PD   + A L
Sbjct: 983  -----------------------MVGLLARVGLFEEALLFIKNMEK---EPDSAVWGAFL 1016

Query: 587  TSCC 590
            ++CC
Sbjct: 1017 SACC 1020


>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 190/627 (30%), Positives = 333/627 (53%), Gaps = 11/627 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I  G     I    LI  + K    R A +   +   +D +++ A+IS  ++  
Sbjct: 210 QIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNG 269

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               A++LF  +   GL P  + FSS++ AC  ++  +I   +H +  K GF    Y+ +
Sbjct: 270 FGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCN 329

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y++ G  +SA+  F      D V+Y +++ G    G  D++ E+F +M+   L+ 
Sbjct: 330 ALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKP 389

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++ ++L A   +K   +GEQ+H + +K G    +   +  ++++LYV+C     A K
Sbjct: 390 DCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDII--IEGSLLDLYVKCSDITTAHK 447

Query: 235 MFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F      +VV W+  + A    D + ++F +F+ ++      N++T  ++L +      
Sbjct: 448 FFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGA 507

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+QI +   K GF   V + + LI MY K G+++ AR I   L  +D VSW ++IAG
Sbjct: 508 LDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAG 567

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+++  F +AL++F  ML   +  +    +S + A +  ++L Q  Q+H+    SG+  D
Sbjct: 568 YTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSED 627

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + L++ Y +C  + E+     +ID K+++  NAL S    +    EAL+++  +  
Sbjct: 628 LSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTR 687

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +  + +  TF   + A A M +++QGK IH + +K  +D +I V +A+I +Y KCG I+ 
Sbjct: 688 ANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDG 747

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           AKR F +I   +   WNAM+ GY+QHGC  E  NLF KM + G KP+ +T++ V+++C H
Sbjct: 748 AKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACSH 807

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHY 618
            GLV E   Y   MS  HGLI  LE +
Sbjct: 808 VGLVNEGLAYFESMSKEHGLIIGLEDF 834



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 187/715 (26%), Positives = 354/715 (49%), Gaps = 25/715 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++S ++K G   + +L   LI  +    D     +   D  +R ++T+N ++SGL    
Sbjct: 108 KLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANK 167

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEIVHGVCLKLGFSSRVYLV 116
            S   L LF ++  + + P+  T +S+++A GS        E +H   +  G  +     
Sbjct: 168 TSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIAC 227

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ YAK+G I SA   F +    D+V++ A++  Y  NG  +++  +F EM   GL 
Sbjct: 228 NPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLS 287

Query: 177 LNEFSLTAVLGAS-----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              +  ++VL A      FD+  GEQ+H    K GF   +  ++ NA++ LY R G  + 
Sbjct: 288 PTPYVFSSVLSACAKIELFDI--GEQLHALVFKCGFF--LETYVCNALVTLYSRLGNFIS 343

Query: 232 AVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A ++F +I   D VS++  I+      C    A  LFK ++ +  + +  T+ +LLS+  
Sbjct: 344 AQQVFSKIKCKDEVSYNSLISGLSQQGCSD-RALELFKKMQLDHLKPDCVTVASLLSACA 402

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
             + L  G+Q+ ++  K G    + I  +L+ +Y KC  +  A   F     ++ V WN 
Sbjct: 403 SIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNV 462

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           M+  Y +    +++  +F  M    LIPN +T  SIL   ++  +L    Q+HS  IK+G
Sbjct: 463 MLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTG 522

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
           F  +  + S LI  Y K   L+ ++ +L  +++++ V   AL +         EAL L+ 
Sbjct: 523 FEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFD 582

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +     + +   FS  + ACA +  L QG+ IH  +  + Y +D+ + +A++ +Y +CG
Sbjct: 583 EMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCG 642

Query: 528 TIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
            I++A  AF KI  +DS++ WNA+M G+AQ G   E   +F +M++  +K    T+ + +
Sbjct: 643 RIQEANLAFEKIDAKDSIS-WNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAV 701

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++  +   +++ +  +  M    G   ++E    ++ L  + G ++GAK    ++P   +
Sbjct: 702 SAAANMANIKQGKQ-IHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNE 760

Query: 647 AHIWQSLLSACTIYG-NID-LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
              W ++++  + +G  I+ + L    K +  +P N  T+V + +  +  G+ N+
Sbjct: 761 IS-WNAMITGYSQHGCGIEAVNLFQKMKQVGAKP-NHVTFVGVISACSHVGLVNE 813



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 228/499 (45%), Gaps = 59/499 (11%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           K++ +   K+GF +   + + LI  Y   G +N    +FD +  +  ++WN +++G   N
Sbjct: 107 KKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVAN 166

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAV-SNSKSLKQAMQVHSHIIKSGFLLDDSM 414
              N+ L +F  M+E ++ PN  T+AS+L A  S + +     Q+H+ II  G  L  S 
Sbjct: 167 KTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRG--LGTSS 224

Query: 415 ISC--LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           I+C  LI  Y K   +  +++V  E+  K++V   A+ S         EA+ L+  +  S
Sbjct: 225 IACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHIS 284

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
                   FS VL ACA +   + G+ +H L  K  +  + +V +A++ +Y + G    A
Sbjct: 285 GLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISA 344

Query: 533 KRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC- 590
           ++ F KI C+D ++ +N+++ G +Q GC      LF KM    +KPD +T  ++L++C  
Sbjct: 345 QQVFSKIKCKDEVS-YNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACAS 403

Query: 591 ----------HAGLVREART------------YLSC--MSDLHGLIP--QLEH---YACI 621
                     H+  ++                Y+ C  ++  H      Q E+   +  +
Sbjct: 404 IKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVM 463

Query: 622 VDLLGRVGLLEGAKMTIDQMPIP---PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
           +   G++  L  +     QM I    P+   + S+L  CT +G +DLG    S+ ++   
Sbjct: 464 LVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGF 523

Query: 679 D-NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH-VGGYTHHFYAGDSS 736
           + N     +L ++YA  G  +    + + + E     E   SW   + GYT H       
Sbjct: 524 EFNVYVCSVLIDMYAKLGKLDIARGILRRLNE-----EDVVSWTALIAGYTQH------- 571

Query: 737 HSQSKEIYKELIKLYEHMV 755
                +++ E + L++ M+
Sbjct: 572 -----DLFTEALNLFDEML 585



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 133/318 (41%), Gaps = 23/318 (7%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L+   NS S     ++HS I+K GF  +  +   LI  Y     LN   +V  ++  ++
Sbjct: 93  LLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRS 152

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA----AMTDLEQGK 498
            +  N + S LV        L L+  +       N  T + VL+A      A   +EQ  
Sbjct: 153 LMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQ-- 210

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH   +           + +ID+Y K G I  A++ F ++C      W A++  Y+Q+G
Sbjct: 211 -IHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNG 269

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ---- 614
              E   LF +M   G+ P    + +VL++C    L             LH L+ +    
Sbjct: 270 FGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIEL-------FDIGEQLHALVFKCGFF 322

Query: 615 LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAG 670
           LE Y C  +V L  R+G    A+    ++    +   + SL+S  +  G  D  L L   
Sbjct: 323 LETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVS-YNSLISGLSQQGCSDRALELFKK 381

Query: 671 SKLLELQPDNESTYVLLS 688
            +L  L+PD  +   LLS
Sbjct: 382 MQLDHLKPDCVTVASLLS 399



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 9/181 (4%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T+  +L  C         K +H   LK  +D++  +   +I+ Y   G +    + F  +
Sbjct: 89  TYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDM 148

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS--CCHAGLVRE 597
              SL  WN ++ G   +   + V  LF +M +  V P+E+T  +VL +    +      
Sbjct: 149 PSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYV 208

Query: 598 ARTYLSCMSDLHGLIPQLEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            + + S +S   G        AC  ++DL  + G +  A+   D++ +  D+  W +++S
Sbjct: 209 EQIHASIISRGLG----TSSIACNPLIDLYAKNGFIRSARKVFDELCM-KDSVSWVAVIS 263

Query: 656 A 656
           +
Sbjct: 264 S 264


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 183/551 (33%), Positives = 292/551 (52%), Gaps = 40/551 (7%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F+ I EP+ + W+  I   A + D V +  L+  +       N YT   LL S   
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 289 ERILRAGKQIQAFCYKVGF--------------------------------MEVVSIGNA 316
            +    G+QI     K+GF                                 +VVS   A
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY-TA 135

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI+ Y   G +  A+ +FD +  KD VSWN+MI+GY+E G + +AL++F  M++ ++ P+
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T  ++L A ++S S++   QVHS +   GF  +  +++ LI  Y KC  +  +  +  
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  K+ +  N L     + + + EAL L++ +  S    N  T   VL ACA +  ++ 
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315

Query: 497 GKAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           G+ IH      LK   +    + +++IDMY KCG IE A + F  +   SL+ WNAM+ G
Sbjct: 316 GRWIHVYIDKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           +A HG      +LF++M K G++PD+IT++ +L++C H+G++   R     M+  + + P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           +LEHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC ++GN++L       L
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           ++++P+N S+Y+LLSN+YASAG W DV ++R  +  K + K PG S I V      F  G
Sbjct: 495 IKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554

Query: 734 DSSHSQSKEIY 744
           D  H Q++EIY
Sbjct: 555 DKFHPQNREIY 565



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 213/451 (47%), Gaps = 56/451 (12%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---S 93
           +F+T Q  + + +N +I G A       +L L+  +   GL P+++TF  L+K+C    +
Sbjct: 20  VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79

Query: 94  LQENEIVHGVCLKLGFSSRVY----LVSGFIEN--------------------------- 122
             E + +HG  LKLGF   +Y    L+S +++N                           
Sbjct: 80  FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YA  G+I SA+  F +    D V++ AM+ GY   G + ++ E+F EM  + +  +E + 
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199

Query: 183 TAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
             VL A   S  ++ G Q+H +    GF S +   + NA+++LY +CG+   A  +F  +
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNL--KIVNALIDLYSKCGEVETACGLFQGL 257

Query: 240 TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           +  DV+SW+  I          EA  LF+++  +    N+ TM+++L +      +  G+
Sbjct: 258 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGR 317

Query: 297 QIQAFCYK--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            I  +  K   G     S+  +LI MY KCG +  A  +F+ ++ K   SWN+MI G++ 
Sbjct: 318 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 377

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +G  + + D+F  M +  + P+  T   +L A S+S  L     +  HI +S    D  M
Sbjct: 378 HGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGML----DLGRHIFRS-MTQDYKM 432

Query: 415 IS------CLITTYGKCNALNESKRVLSEID 439
                   C+I   G      E++ +++ ++
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTME 463



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 186/405 (45%), Gaps = 27/405 (6%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H D +  T LI+ +    D R A +   +   +D++++NA+ISG A       AL+LF+ 
Sbjct: 127 HRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEE 186

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +    +RPD  T+ +++ AC   GS++    VH      GF S + +V+  I+ Y+K GE
Sbjct: 187 MMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE 246

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + +A   F+     D +++  ++ GY     + ++  +F EM   G   N+ ++ +VL A
Sbjct: 247 VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPA 306

Query: 189 -----SFDVKEGEQIHGFGVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITE 241
                + D+  G  IH +  K   L GV N   L  +++++Y +CG    A ++F+ +  
Sbjct: 307 CAHLGAIDI--GRWIHVYIDKR--LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLH 362

Query: 242 PDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
             + SW+  I   A       +F LF  +R    + ++ T + LLS+     +L  G+ I
Sbjct: 363 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422

Query: 299 -QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENG 356
            ++          +     +I + G  G   +A  + + + +  D V W S++     +G
Sbjct: 423 FRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482

Query: 357 FFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
               A     ++++        + L+ N Y  A   E V+  ++L
Sbjct: 483 NVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRAL 527


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 176/481 (36%), Positives = 261/481 (54%), Gaps = 37/481 (7%)

Query: 311 VSIGNALISMYGKCGQVNDARSIF----DYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           V   +ALIS + + G+V + + +F    D  +  + VSWN MI+G++ +G +  A+ MF 
Sbjct: 140 VVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQ 199

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           +M    L P+G +++S+L AV +       +Q+H ++IK G   D  ++S LI  YGKC 
Sbjct: 200 NMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCA 259

Query: 427 ALNESKRVLSEIDKKNAVHINALASVL----------------------------VYASC 458
             +E   V +E+D+ +    NAL + L                            + ASC
Sbjct: 260 CASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASC 319

Query: 459 HA-----EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  EALEL+R +     + N  T   +L AC  +  L  GKA HC +L+     D+
Sbjct: 320 SQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDV 379

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V SA+IDMY KCG +  ++  F  +   +L  WN++M GYA HG   E  N+F  M + 
Sbjct: 380 YVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRC 439

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G KPD +++  VL++C   GL  E   Y   MS  HG+  ++EHY+C+V LLGR G LE 
Sbjct: 440 GQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEE 499

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           A   I QMP  PD+ +W +LLS+C ++  +DLG +A  ++ EL+P N   Y+LLSN+YAS
Sbjct: 500 AYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYAS 559

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
             MW +V  +R  M+ + L K PGYSWI +    H   AGDSSH Q  +I ++L KL   
Sbjct: 560 KAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVE 619

Query: 754 M 754
           M
Sbjct: 620 M 620



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 198/479 (41%), Gaps = 98/479 (20%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGV 103
           I+    I   ++    G  +++F  +  QG+ PD+    +++K C +L   Q  + +H  
Sbjct: 40  ISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
            L  G      ++S  +  Y +   +  A   F        V  +A++  +   G   ++
Sbjct: 100 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 159

Query: 164 KEVFVEMRSLGLELNEFS-----------------------------------LTAVLGA 188
           KE+F + R LG+ELN  S                                   +++VL A
Sbjct: 160 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA 219

Query: 189 SFDVKE---GEQIHGFGVKVGF----------------------LSGVCNHLN------- 216
             D+     G QIH + +K G                       +SGV N ++       
Sbjct: 220 VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGAC 279

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPD--VVSWSERIAAACDG---VEAFGLFKDLRFND 271
           NA++    R G   +A+++F +    D  VVSW+  IA+       +EA  LF++++   
Sbjct: 280 NALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEG 339

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + N  T+  LL + G    L  GK    F  + G    V +G+ALI MY KCG++  +R
Sbjct: 340 VKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASR 399

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
             FD +  ++ VSWNS++AGY+ +G   +A+++F  M      P+  +   +L A +   
Sbjct: 400 LCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGG 459

Query: 392 SLKQAMQVHSHIIKSGFLLDDSM------------ISCLITTYGKCNALNESKRVLSEI 438
                      + + G+   DSM             SC++T  G+   L E+  ++ ++
Sbjct: 460 -----------LTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQM 507



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/392 (21%), Positives = 155/392 (39%), Gaps = 70/392 (17%)

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           I K  +S    I  +S+   F   + +F +ML   ++P+   + ++++  +   +L+   
Sbjct: 35  ILKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGK 94

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q+H   + SG  LD  ++S L+  Y + + L +++ V  ++ +   V  +AL S      
Sbjct: 95  QMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKG 154

Query: 458 CHAEALELYRTIWGSCREVN-----------------------------------GSTFS 482
              E  EL+        E+N                                   G++ S
Sbjct: 155 RVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVS 214

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC---------------- 526
            VL A   +     G  IHC  +K     D FV SA+IDMY KC                
Sbjct: 215 SVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEV 274

Query: 527 ---------------GTIEDAKRAFRKICRDSL--AGWNAMMMGYAQHGCYHEVSNLFNK 569
                          G +++A   F++     L    W +M+   +Q+G   E   LF +
Sbjct: 275 DVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFRE 334

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M   GVKP+ +T   +L +C +   +   +    C S  +G+   +   + ++D+  + G
Sbjct: 335 MQIEGVKPNSVTIPCLLPACGNIAALLHGKAA-HCFSLRNGIFNDVYVGSALIDMYAKCG 393

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            +  +++  D MP   +   W SL++   ++G
Sbjct: 394 RMLASRLCFDMMP-NRNLVSWNSLMAGYAMHG 424



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 37/229 (16%)

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q H+HI+K+G  L ++     I  + K N      RV S +  +  V             
Sbjct: 30  QAHAHILKTGISLPET-----IQIFSKLNHFGHVIRVFSYMLTQGIVP------------ 72

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
                              +      V+K CAA++ L+ GK +HC AL +    D  V S
Sbjct: 73  -------------------DSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLS 113

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           +++ MY +   ++DA+  F K+ +  +   +A++  +A+ G   E   LF +    GV+ 
Sbjct: 114 SLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVEL 173

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           + +++  +++    +G   +A      M  L GL P     + ++  +G
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNM-HLEGLKPDGTSVSSVLPAVG 221


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 222/727 (30%), Positives = 356/727 (48%), Gaps = 76/727 (10%)

Query: 60  CQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
           C++   LK+F R L  QGL  D  T + LV     L   E        L F+  V+    
Sbjct: 42  CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE-------SLSFAKEVF---- 90

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             EN    G       CF          Y +++ GY  +G  +++  +F+ M + G+  +
Sbjct: 91  --ENSESYG------TCF---------MYNSLIRGYASSGLCNEAILLFLRMMNSGISPD 133

Query: 179 EFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +++    L A    +    G QIHG  VK+G+   +   + N++++ Y  CG+   A K+
Sbjct: 134 KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL--FVQNSLVHFYAECGELDSARKV 191

Query: 236 FDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           FDE++E +VVSW+  I        A D V+ F  F+ +R  +   N  TM+ ++S+    
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLF--FRMVRDEEVTPNSVTMVCVISACAKL 249

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+++ AF    G      + +AL+ MY KC  ++ A+ +FD     +    N+M 
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y   G   +AL +F  M++  + P+  +M S + + S  +++      H +++++GF 
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369

Query: 410 LDDSMISCLITTYGKCNALNESKRVLS---------------------EID--------- 439
             D++ + LI  Y KC+  + + R+                       E+D         
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429

Query: 440 -KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN--GSTFSIVLKACAAMTDLEQ 496
            +KN V  N + S LV  S   EA+E++ ++  S   VN  G T   +  AC  +  L+ 
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ-SQEGVNADGVTMMSIASACGHLGALDL 488

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
            K I+    K     D+ + + ++DM+ +CG  E A   F  +    ++ W A +   A 
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
            G       LF+ M + G+KPD + ++  LT+C H GLV++ +     M  LHG+ P+  
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY C+VDLLGR GLLE A   I+ MP+ P+  IW SLL+AC + GN+++   A  K+  L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
            P+   +YVLLSN+YASAG WND+ K+R  MKEK L K PG S I + G TH F +GD S
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728

Query: 737 HSQSKEI 743
           H +   I
Sbjct: 729 HPEMPNI 735



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 249/531 (46%), Gaps = 53/531 (9%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--NEI-VHGVCL 105
           YN+LI G A       A+ LF R+   G+ PD +TF   + AC   +   N I +HG+ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K+G++  +++ +  +  YA+ GE+ SA   F +  + + V++T+M+CGY        + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 166 VFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           +F  M R   +  N  ++  V+ A     D++ GE+++ F    G    V + + +A+++
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVD 279

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV------EAFGLFKDLRFNDFQIN 275
           +Y++C     A ++FDE    ++   +   A A + V      EA G+F  +  +  + +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCN---AMASNYVRQGLTREALGVFNLMMDSGVRPD 336

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
             +M++ +SS    R +  GK    +  + GF    +I NALI MY KC + + A  IFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396

Query: 336 YLIFKDSVSWNSMIAGYSENG-------------------------------FFNQALDM 364
            +  K  V+WNS++AGY ENG                                F +A+++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456

Query: 365 FCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           FC M  +  +  +G TM SI  A  +  +L  A  ++ +I K+G  LD  + + L+  + 
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           +C     +  + + +  ++     A    +  A     A+EL+  +     + +G  F  
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576

Query: 484 VLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
            L AC+    ++QGK I    L L     +D+     ++D+  + G +E+A
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY-GCMVDLLGRAGLLEEA 626



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           IY  + KNG  LD  L TTL+  F++  D   A        NRD+  + A I  +A    
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL 107
           +  A++LFD +  QGL+PD   F   + AC   G +Q+ + +    LKL
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600


>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 195/642 (30%), Positives = 324/642 (50%), Gaps = 90/642 (14%)

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I N +K G I+ A   F +  + D + +T ++ GY+  G  ++++ +F  + +   + N
Sbjct: 58  MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDA---KKN 114

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             + TA++G                                   Y+R  +  DA K+F+E
Sbjct: 115 VVTWTAMVGG----------------------------------YIRSNKISDAEKLFNE 140

Query: 239 ITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
           +   +VVSW+                             TMI+  +  G         +I
Sbjct: 141 MPNKNVVSWN-----------------------------TMIDGYAQNG---------RI 162

Query: 299 QAFCY---KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
            +  Y   K+    VVS  N ++SM  +CG++ +AR +FD +  +D +SW +MIAG S+N
Sbjct: 163 DSAMYLFEKMPERNVVSW-NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKN 221

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G  ++A  +F  M E +++    +  +++   + +  L +A+ +   + +      ++MI
Sbjct: 222 GRIDEARLLFDRMPERNVV----SWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMI 277

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY-RTIWGSCR 474
           + LI        L  ++++ +E+ KKN +    + +  V      EAL+++ R +  +  
Sbjct: 278 TGLIQN----GDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGA 333

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + N  TF  VL AC+ +  L +G+ +H +  K  Y    FV SA+I+MY KCG +  A++
Sbjct: 334 KPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARK 393

Query: 535 AFRK--ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            F      +  L  WN ++  YA HG   E  N F +M K G KPD++TY+ +L++C HA
Sbjct: 394 MFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHA 453

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GLV E   Y   +     ++ + +HYAC+VDL GR G L+ A   I+++   P A +W +
Sbjct: 454 GLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGA 513

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL+ C ++ N+ +G  A  KLLE++P+N  TY+LLSN+YAS G W +  ++R +MK+K L
Sbjct: 514 LLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGL 573

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K+PG SWI VG   H F  GD SHSQSK IY  L  L+  M
Sbjct: 574 KKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKM 615



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 136/579 (23%), Positives = 253/579 (43%), Gaps = 72/579 (12%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQE-NEIVHGVCL 105
           N +I+ L++  +   A +LFD +R     PD  T+++++     CG ++E   +   V  
Sbjct: 56  NWMITNLSKDGRIMEARRLFDEMR----EPDVITWTTVISGYIKCGMIEEARRLFDRVDA 111

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K    +   +V G+I    +S +I  AE  F +  + + V++  M+ GY  NG  D +  
Sbjct: 112 KKNVVTWTAMVGGYI----RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMY 167

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +F +M     E N  S                                   N +M++  +
Sbjct: 168 LFEKMP----ERNVVSW----------------------------------NTVMSMLAQ 189

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           CG+  +A ++FD + E DV+SW+  IA    G+   G   + R    ++ E  +++  + 
Sbjct: 190 CGRIEEARRLFDRMPERDVISWTAMIA----GLSKNGRIDEARLLFDRMPERNVVSWNAM 245

Query: 286 VGG-ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           + G  + LR  + +  F  ++   ++ S  N +I+   + G +  AR +F+ +  K+ +S
Sbjct: 246 ITGYAQNLRLDEALDLF-ERMPERDLPSW-NTMITGLIQNGDLRRARKLFNEMPKKNVIS 303

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           W +MI G  + G   +AL +F  ML  +   PN  T  S+L A SN   L +  QVH  I
Sbjct: 304 WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII 363

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSE--IDKKNAVHINALASVLVYASCHAE 461
            K+ +     ++S LI  Y KC  L  ++++  +    +++ V  N + +   +     E
Sbjct: 364 SKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKE 423

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----S 517
           A+  ++ +  S  + +  T+  +L AC+    +E+G       +K   D+ I V     +
Sbjct: 424 AINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK---DRSILVREDHYA 480

Query: 518 AVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            ++D+  + G +++A     ++  + S   W A++ G   H           K+    V+
Sbjct: 481 CLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKL--LEVE 538

Query: 577 PDEI-TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           P+   TYL +       G  REA      M D  GL  Q
Sbjct: 539 PENAGTYLLLSNIYASTGKWREAARVRLKMKD-KGLKKQ 576



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 214/480 (44%), Gaps = 55/480 (11%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           +I++ +K      A R   + +  D+IT+  +ISG  +      A +LFDR+     + +
Sbjct: 58  MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV---DAKKN 114

Query: 81  AFTFSSLVKACGSLQENEI---------------------VHGVCLKLGFSSRVYLVSGF 119
             T++++V   G ++ N+I                     + G        S +YL    
Sbjct: 115 VVTWTAMV--GGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKM 172

Query: 120 IEN-----------YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
            E             A+ G I  A   F    + D +++TAM+ G   NG  D+++ +F 
Sbjct: 173 PERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFD 232

Query: 169 EMRSLGLELNEFSLTAVL-GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
            M     E N  S  A++ G + +++  E +  F              N  I  L ++ G
Sbjct: 233 RMP----ERNVVSWNAMITGYAQNLRLDEALDLFE---RMPERDLPSWNTMITGL-IQNG 284

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLF-KDLRFNDFQINEYTMINLL 283
               A K+F+E+ + +V+SW+  I       +  EA  +F + L  N  + N+ T +++L
Sbjct: 285 DLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVL 344

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF--KD 341
            +      L  G+Q+     K  + +   + +ALI+MY KCG++  AR +FD  +   +D
Sbjct: 345 GACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRD 404

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSWN +IA Y+ +G+  +A++ F  M +    P+  T   +L A S++  +++ ++   
Sbjct: 405 LVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFD 464

Query: 402 HIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            ++K    L+ +   +CL+   G+   L E+   +  ++ K +  +    ++L   + HA
Sbjct: 465 ELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARV--WGALLAGCNVHA 522



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 163/349 (46%), Gaps = 28/349 (8%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            T++S   +      A R       RD+I++ A+I+GL++  +   A  LFDR+      
Sbjct: 181 NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRM------ 234

Query: 79  PDAFTFSSLVKACGSLQENEIVHGVCL-----KLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           P+    S      G  Q   +   + L     +    S   +++G I+N    G++  A 
Sbjct: 235 PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQN----GDLRRAR 290

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFSLTAVLGASFDV 192
             F +    + +++T M+ G V  GE +++ ++F  M S  G + N+ +  +VLGA  ++
Sbjct: 291 KLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNL 350

Query: 193 K---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE--ITEPDVVSW 247
               EG+Q+H    K  +       + +A++N+Y +CG+   A KMFD+   ++ D+VSW
Sbjct: 351 AGLGEGQQVHQIISKTVYQDST--FVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW 408

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFCY 303
           +  IAA      G EA   FK++R + F+ ++ T + LLS+     ++  G K       
Sbjct: 409 NGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 468

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
               +        L+ + G+ G++ +A    + L  K S   W +++AG
Sbjct: 469 DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAG 517



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 88/428 (20%), Positives = 179/428 (41%), Gaps = 66/428 (15%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N +I+   K G++ +AR +FD +   D ++W ++I+GY + G   +A  +F  +      
Sbjct: 56  NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV---DAK 112

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            N  T  +++     S  +  A ++ + +     +  ++MI      Y +   ++ +  +
Sbjct: 113 KNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMID----GYAQNGRIDSAMYL 168

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             ++ ++N V  N + S+L  A C    +E  R ++    E +  +++ ++   +    +
Sbjct: 169 FEKMPERNVVSWNTVMSML--AQCG--RIEEARRLFDRMPERDVISWTAMIAGLSKNGRI 224

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           ++ +    L      ++++   +A+I  Y +   +++A   F ++    L  WN M+ G 
Sbjct: 225 DEAR----LLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGL 280

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
            Q+G       LFN+M K  V    I++  ++T C   G   EA    S M   +G  P 
Sbjct: 281 IQNGDLRRARKLFNEMPKKNV----ISWTTMITGCVQEGESEEALKIFSRMLSTNGAKP- 335

Query: 615 LEHYACIVDLLGR----VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
             +    V +LG      GL EG ++                ++S  T+Y          
Sbjct: 336 --NQGTFVSVLGACSNLAGLGEGQQV--------------HQIISK-TVY---------- 368

Query: 671 SKLLELQPDNESTYVL--LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH-VGGYT 727
                     +ST+V+  L N+Y+  G   ++G  RK   +    +    SW   +  Y 
Sbjct: 369 ---------QDSTFVVSALINMYSKCG---ELGTARKMFDDGMTSQRDLVSWNGIIAAYA 416

Query: 728 HHFYAGDS 735
           HH Y  ++
Sbjct: 417 HHGYGKEA 424



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD---TQNRDIITYNALISGLA 57
           Q++ ++ K  +     + + LI+ ++K  +   A R +FD   T  RD++++N +I+  A
Sbjct: 358 QVHQIISKTVYQDSTFVVSALINMYSKCGELGTA-RKMFDDGMTSQRDLVSWNGIIAAYA 416

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
                  A+  F  +R  G +PD  T+  L+ AC
Sbjct: 417 HHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSAC 450


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/600 (31%), Positives = 311/600 (51%), Gaps = 42/600 (7%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           + +Q+H   ++   LS     +   ++++Y       +A+ +F  +  P V++W   I  
Sbjct: 23  QAKQLHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79

Query: 254 ACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
             D     +A   F ++R +    +     ++L S      LR G+ +  F  ++G    
Sbjct: 80  FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139

Query: 311 VSIGNALISMYGK---------CGQVND---------------------------ARSIF 334
           +  GNAL++MY K          G V D                            R +F
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           + +  KD VS+N++IAGY+++G +  AL M   M    L P+ +T++S+L   S    + 
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  ++H ++I+ G   D  + S L+  Y K   + +S+RV S +  ++ +  N+L +  V
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
               + EAL L+R +  +  +     FS V+ ACA +  L  GK +H   L+  +  +IF
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           + SA++DMY KCG I+ A++ F ++       W A++MG+A HG  HE  +LF +M + G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           VKP+++ ++AVLT+C H GLV EA  Y + M+ ++GL  +LEHYA + DLLGR G LE A
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              I +M + P   +W +LLS+C+++ N++L      K+  +  +N   YVL+ N+YAS 
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G W ++ KLR  M++K L K+P  SWI +   TH F +GD SH    +I + L  + E M
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 219/461 (47%), Gaps = 54/461 (11%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGF 201
           +A+ +++  +     F K+   FVEMR+ G   +     +VL +     D++ GE +HGF
Sbjct: 71  LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130

Query: 202 GVKVGFLSGVCN-HLNNAIMNLYVRC---GQKLDAVKMFDEITE---------------- 241
            V++G     C+ +  NA+MN+Y +    G K+    +FDE+ +                
Sbjct: 131 IVRLGM---DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187

Query: 242 -----------------PDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMIN 281
                             DVVS++  IA  A  G+  +A  + +++   D + + +T+ +
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L        +  GK+I  +  + G    V IG++L+ MY K  ++ D+  +F  L  +D
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            +SWNS++AGY +NG +N+AL +F  M+   + P     +S++ A ++  +L    Q+H 
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA- 460
           ++++ GF  +  + S L+  Y KC  +  ++++    D+ N +   +  ++++  + H  
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF---DRMNVLDEVSWTAIIMGHALHGH 424

Query: 461 --EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVES 517
             EA+ L+  +     + N   F  VL AC+ +  +++     + +      +Q++   +
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
           AV D+  + G +E+A     K+C +     W+ ++   + H
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 171/338 (50%), Gaps = 26/338 (7%)

Query: 32  RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           RR F  +     +D+++YN +I+G A+      AL++   +    L+PD+FT SS++   
Sbjct: 196 RRVFEVM---PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252

Query: 92  GS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
                + + + +HG  ++ G  S VY+ S  ++ YAKS  I  +E  F      D +++ 
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKV 205
           ++V GYV NG ++++  +F +M +  ++    + ++V+ A   +     G+Q+HG+ ++ 
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFG 262
           GF S +   + +A++++Y +CG    A K+FD +   D VSW+  I   A    G EA  
Sbjct: 373 GFGSNI--FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN------A 316
           LF++++    + N+   + +L++         G   +A+ Y     +V  +        A
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACS-----HVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYS 353
           +  + G+ G++ +A +    +  + + S W+++++  S
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  +I+ G   D  + ++L+  + K A    + R       RD I++N+L++G  +  
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   AL+LF ++    ++P A  FSS++ AC    +L   + +HG  L+ GF S +++ S
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G I +A   F     LD V++TA++ G+  +G   ++  +F EM+  G++ 
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKM 235
           N+ +  AVL A   V   ++  G+   +  + G+   L +  A+ +L  R G+  +A   
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502

Query: 236 FDEI-TEPDVVSWS 248
             ++  EP    WS
Sbjct: 503 ISKMCVEPTGSVWS 516



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 45/218 (20%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++  +++ G   +  +++ L+  ++K  + + A R +FD  N  D +++ A+I G A  
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA-RKIFDRMNVLDEVSWTAIIMGHALH 422

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--------------------GSLQENEI 99
                A+ LF+ ++ QG++P+   F +++ AC                    G  QE E 
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482

Query: 100 VHGVCLKLGFSSRVYLVSGFIENY--AKSGEIVS------------------AEMCFRDC 139
              V   LG + ++     FI       +G + S                  AE  F   
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF--T 540

Query: 140 LDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +D +N+ AY  M   Y  NG + +  ++ + MR  GL 
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578


>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 189/557 (33%), Positives = 303/557 (54%), Gaps = 10/557 (1%)

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAAACDG---V 258
           +K  F + + NHL    +N+Y +    L++ K+  E+     VV+W+  IA +      V
Sbjct: 36  LKTPFPAFLYNHL----VNMYAKLDH-LNSAKLILELAPCRSVVTWTALIAGSVQNGCFV 90

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
            A   F D+  +  + N++T   +L +  G R+   GKQ+ A   K G +  V +G ++ 
Sbjct: 91  SALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVF 150

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY K G +NDA  +FD +  ++  +WN+ I+    +G    ++  F  +L     P+  
Sbjct: 151 DMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSI 210

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  + L A S+   L    Q+H  II+SG+  + S+ + LI  YGKC  +  S+ V   +
Sbjct: 211 TFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRM 270

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            ++N+V  ++L +  V  +   +A  L+        E      S VL ACA ++++E G+
Sbjct: 271 GERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGR 330

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           ++  LA+KA  +Q+IFV SA++DMY KCG+I++A++AF  +   +L  WNA++ GYA  G
Sbjct: 331 SVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQG 390

Query: 559 CYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
             ++   L  +M S  G+ P  ++ +  L++C  AG ++        M + +G+ P  EH
Sbjct: 391 HANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEH 450

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC+VDLLGR G++E A   I +MP PP   IW +LL AC ++G  +LG LA  KL EL 
Sbjct: 451 YACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELD 510

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P +   +V+LSN++A+ G W +V  +R EMKE  + K  G+SWI V    H F A D SH
Sbjct: 511 PKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSH 570

Query: 738 SQSKEIYKELIKLYEHM 754
            +  EI   L KL + M
Sbjct: 571 EKDPEIQDILGKLRKEM 587



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 200/415 (48%), Gaps = 13/415 (3%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           L++ + K      A   L     R ++T+ ALI+G  +      AL  F  +    +RP+
Sbjct: 48  LVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPN 107

Query: 81  AFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            FTF  ++KA   L+ +     +H + +K G  + V++     + Y+K G +  A   F 
Sbjct: 108 DFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFD 167

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKE 194
           +    +   + A +   V +G  + S   F+E+  +G + +  +  A L A  D   +  
Sbjct: 168 EMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGP 227

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G Q+HGF ++ G+   V   ++N +++ Y +CG+   +  +FD + E + VSWS  IAA 
Sbjct: 228 GCQLHGFIIRSGYGQNV--SVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAY 285

Query: 255 CDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
               E   A  LF   R  D +  ++ + ++L +  G   +  G+ +QA   K    + +
Sbjct: 286 VQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNI 345

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + +AL+ MYGKCG +++A   F+ +  ++ VSWN+++ GY+  G  N+A+ +   M   
Sbjct: 346 FVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSA 405

Query: 372 S-LIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFLLDDSMISCLITTYGK 424
           + ++P+  ++   L A S +  LK  M++  S   + G        +CL+   G+
Sbjct: 406 AGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGR 460



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 229/468 (48%), Gaps = 23/468 (4%)

Query: 105 LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
           LK  F +  +L +  +  YAK   + SA++          V +TA++ G V NG F  + 
Sbjct: 36  LKTPFPA--FLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSAL 93

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
             F +M S  +  N+F+   VL AS  ++    G+Q+H   VK G ++ V   +  ++ +
Sbjct: 94  LHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDV--FVGCSVFD 151

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQIN 275
           +Y + G   DA K+FDE+   ++ +W+  I+ +       D V AF   + LR    + +
Sbjct: 152 MYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAF--IELLRVGG-KPD 208

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
             T    L++   +  L  G Q+  F  + G+ + VS+ N LI  YGKCG+V  +  +FD
Sbjct: 209 SITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFD 268

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +  ++SVSW+S+IA Y +N    +A  +F    +  + P  + ++S+L A +    ++ 
Sbjct: 269 RMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEF 328

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
              V +  +K+    +  + S L+  YGKC +++ +++  + + ++N V  NAL     +
Sbjct: 329 GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAH 388

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDI 513
                +A+ L   +  S   +  S  S++  L AC+   DL+ G  I   ++K RY  + 
Sbjct: 389 QGHANKAVALLEEM-TSAAGIVPSYVSLICALSACSRAGDLKTGMKIF-ESMKERYGVEP 446

Query: 514 FVE--SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
             E  + ++D+  + G +E A    +++    +++ W A++     HG
Sbjct: 447 GPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHG 494



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 174/368 (47%), Gaps = 14/368 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G   D  +  ++   ++K      A++   +  +R++ T+NA IS      
Sbjct: 129 QLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHG 188

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   ++  F  L   G +PD+ TF + + AC     L     +HG  ++ G+   V + +
Sbjct: 189 RPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSN 248

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y K GE+  +EM F    + ++V++++++  YV N E +K+  +F+  R   +E 
Sbjct: 249 GLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEP 308

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +F +++VL A   + E   G  +    VK      +   + +A++++Y +CG   +A +
Sbjct: 309 TDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNI--FVASALVDMYGKCGSIDNAEQ 366

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEY-TMINLLSSVGGER 290
            F+ + E ++VSW+  +   A      +A  L +++      +  Y ++I  LS+     
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAG 426

Query: 291 ILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSM 348
            L+ G +I ++   + G          L+ + G+ G V  A      + F  ++S W ++
Sbjct: 427 DLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGAL 486

Query: 349 IAGYSENG 356
           +     +G
Sbjct: 487 LGACRMHG 494



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 7/188 (3%)

Query: 497 GKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           G+A H   LK  +     F+ + +++MY K   +  AK         S+  W A++ G  
Sbjct: 25  GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQ 614
           Q+GC+      F+ M    V+P++ T+  VL +    GL  +     L  ++   GLI  
Sbjct: 85  QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKA--STGLRMDTTGKQLHALAVKEGLIND 142

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +     + D+  ++G L  A    D+MP   +   W + +S   ++G  +  ++A  +LL
Sbjct: 143 VFVGCSVFDMYSKLGFLNDAYKVFDEMP-HRNLETWNAYISNSVLHGRPEDSVIAFIELL 201

Query: 675 EL--QPDN 680
            +  +PD+
Sbjct: 202 RVGGKPDS 209


>gi|296085749|emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 191/544 (35%), Positives = 298/544 (54%), Gaps = 35/544 (6%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           NAI+  Y +  + L A ++FD+I EPD+VS++  I+A  D  E   A GLF  +R     
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T+  ++++   +  L    Q+ +     GF   VS+ NAL++ YGK G ++DA+ +
Sbjct: 138 MDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195

Query: 334 FDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           F  +   +D VSWNSMI  Y ++   ++AL +F  M+   L  + +T+AS+L A +  + 
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALAS 451
           L   +Q H  +IK+GF  +  + S LI  Y KC   +++ ++V  EI + + V  N + S
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315

Query: 452 VLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
                    E ALE +R + G     N  +F  V+ AC+ ++   QGK IH LALK    
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK---- 371

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
                                  R F ++   +    N+M+ GYAQHG   E  +LF  M
Sbjct: 372 -----------------------RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWM 408

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            +  + P  IT+++VL++C H G V E   Y + M +   + P+ EHY+C++DLLGR G 
Sbjct: 409 LERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGK 468

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           L  A+  I +MP  P +  W SLL AC  +GNI+L + A +++L+L+P N + YV+LSN+
Sbjct: 469 LSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNM 528

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           YASAG W +V  +RK M+++ + K+PG SWI V    H F A DSSH   KEIY+ L ++
Sbjct: 529 YASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEM 588

Query: 751 YEHM 754
              M
Sbjct: 589 SGKM 592



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 209/417 (50%), Gaps = 49/417 (11%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----G 92
           LFD     D+++YN LIS  A   ++ PAL LF  +R  GL  D FT S+++ AC    G
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVG 155

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMV 151
            + +   +H V +  GF S V + +  +  Y K+G++  A+  F     + D V++ +M+
Sbjct: 156 LIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFL 208
             Y  + E  K+  +F EM   GL ++ F+L +VL A     D+  G Q HG  +K GF 
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272

Query: 209 SGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAAACDGVE----AFGL 263
               +H+ + +++LY +CG  + D  K+F+EITEPD+V W+  ++      E    A   
Sbjct: 273 QN--SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           F+ ++   ++ N+ + + ++S+         GKQI +   K                   
Sbjct: 331 FRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK------------------- 371

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
                    +FD +   ++VS NSMIAGY+++G   ++L +F  MLE  + P   T  S+
Sbjct: 372 --------RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISV 423

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           L A +++  +++    + +++K  F ++      SC+I   G+   L+E++ +++ +
Sbjct: 424 LSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARM 479



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 231/508 (45%), Gaps = 47/508 (9%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  I  YAK    + A   F    + D V+Y  ++  Y   GE   +  +F  MR 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 173 LGLELNEFSLTAVLGASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +GL+++ F+L+AV+ A   DV    Q+H   V  GF S V   +NNA++  Y + G   D
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS--VNNALLTYYGKNGDLDD 191

Query: 232 AVKMFDEITE-PDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           A ++F  +    D VSW+  I A     +G +A GLF+++      ++ +T+ ++L++  
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWN 346
               L  G Q      K GF +   +G+ LI +Y KC G ++D R +F+ +   D V WN
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311

Query: 347 SMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           +M++GYS+N  F   AL+ F  M      PN  +   ++ A SN  S  Q  Q+HS  + 
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL- 370

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
                                     KR+   + + N V +N++ +         E+L L
Sbjct: 371 --------------------------KRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHL 404

Query: 466 YRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVID 521
           ++  W   R++  +  TF  VL ACA    +E+G     + +K +++ +   E  S +ID
Sbjct: 405 FQ--WMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNM-MKEKFNIEPEAEHYSCMID 461

Query: 522 MYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           +  + G + +A+    ++  +  + GW +++     HG         N++ +  ++P   
Sbjct: 462 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ--LEPSNA 519

Query: 581 TYLAVLTSC-CHAGLVREARTYLSCMSD 607
               VL++    AG   E  T    M D
Sbjct: 520 APYVVLSNMYASAGRWEEVATVRKFMRD 547



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 211/473 (44%), Gaps = 50/473 (10%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR--------- 331
           +LL +   ER L  GK + +   K          N  I +Y KCG++  AR         
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 332 ----------------------SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
                                  +FD +   D VS+N++I+ Y++ G    AL +F  M 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  L  +G+T+++++ A  +   L    Q+HS  + SGF    S+ + L+T YGK   L+
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190

Query: 430 ESKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++KRV   +   ++ V  N++          ++AL L++ +      V+  T + VL A 
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAFRKICRDSLAGW 547
             + DL  G   H   +K  + Q+  V S +ID+Y KC G + D ++ F +I    L  W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 548 NAMMMGYAQHGCYHEVS-NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           N M+ GY+Q+  + E +   F +M   G +P++ +++ V+++C +     + +   S   
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA- 369

Query: 607 DLHGLIPQL-EHYACIVDLLGRVGLLEGAKMT-------IDQMPIPPDAHIWQSLLSACT 658
            L  L  ++ EH    ++ +       G +M        + +  I P +  + S+LSAC 
Sbjct: 370 -LKRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACA 428

Query: 659 IYGNIDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
             G ++ G    + + E   ++P+ E  Y  + +L   AG  ++   L   M 
Sbjct: 429 HTGRVEEGWNYFNMMKEKFNIEPEAEH-YSCMIDLLGRAGKLSEAENLIARMP 480



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 176/415 (42%), Gaps = 51/415 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++S+ + +G      ++  L++++ K  D   A R  +     RD +++N++I    + 
Sbjct: 159 QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
            +   AL LF  +  +GL  D FT +S++ A   L++       HG  +K GF    ++ 
Sbjct: 219 QEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG 278

Query: 117 SGFIENYAKSGEIVS-AEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLG 174
           SG I+ Y+K G  +S     F +  + D V +  MV GY  N EF + + E F +M+ +G
Sbjct: 279 SGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG 338

Query: 175 LELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              N+ S   V+ A  ++    +G+QIH   +K                           
Sbjct: 339 YRPNDCSFVCVISACSNLSSPSQGKQIHSLALK--------------------------- 371

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             ++FD + E + VS +  IA  A  G+  E+  LF+ +          T I++LS+   
Sbjct: 372 --RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 429

Query: 289 E-RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWN 346
             R+            K          + +I + G+ G++++A ++   + F   S+ W 
Sbjct: 430 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWA 489

Query: 347 SMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSL 393
           S++     +G    A+     +L+        + ++ N Y  A   E V+  +  
Sbjct: 490 SLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 544



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 36/208 (17%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           F  +LK C A  DL  GK++H L +K+      +  +  I +Y KCG +  A++AF+ I 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 541 RDSLAGWNAMMMGYAQ-------HGCYHEVSN------------------------LFNK 569
             ++  +NA++  YA+       H  + ++                          LF+ 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 570 MSKFGVKPDEITYLAVLTSCC-HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           M + G+  D  T  AV+T+CC   GL+ +    L  ++   G    +     ++   G+ 
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           G L+ AK     M    D   W S++ A
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVA 214


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 181/556 (32%), Positives = 285/556 (51%), Gaps = 40/556 (7%)

Query: 232 AVKMFDEI--TEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           A+ +F  I    P++  W+  I A         +  LF  +  +    N +T  +L  S 
Sbjct: 78  ALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSC 137

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ-------------------- 326
              +     KQ+ A   K+       +  +LI MY + G+                    
Sbjct: 138 AKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFT 197

Query: 327 -----------VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
                      V+DAR +FD +  KD VSWN+MIAGY ++G F +AL  F  M E  + P
Sbjct: 198 ALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSP 257

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N  TM S+L A  + +SL+    + S +   GF  +  +++ L+  Y KC  +  ++++ 
Sbjct: 258 NQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLF 317

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
             ++ K+ +  N +     + S + EAL L+  +       N  TF  VL ACA++  L+
Sbjct: 318 DGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALD 377

Query: 496 QGKAIHCLA---LKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
            GK +H      LK   +  ++ + +++I MY KCG +E A++ FR +   SLA WNAM+
Sbjct: 378 LGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMI 437

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G A +G       LF +M   G +PD+IT++ VL++C  AG V     Y S M+  +G+
Sbjct: 438 SGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGI 497

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P+L+HY C++DLL R G  + AK+ +  M + PD  IW SLL+AC I+G ++ G     
Sbjct: 498 SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAE 557

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           +L EL+P+N   YVLLSN+YA AG W+DV K+R ++ +K + K PG + I + G  H F 
Sbjct: 558 RLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFL 617

Query: 732 AGDSSHSQSKEIYKEL 747
            GD  H QS+ I++ L
Sbjct: 618 VGDKFHPQSENIFRML 633



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 215/488 (44%), Gaps = 51/488 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDT--QNRDIITYNALISGL 56
           QI+SL+IK+G H      + LI     +   D   A         Q  +I  +N LI   
Sbjct: 43  QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAH 102

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           +       +L LF ++ + GL P++ TF SL K+C    +  E + +H   LKL      
Sbjct: 103 SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHP 162

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           ++ +  I  Y++ GE+  A + F      D V++TA++ GYV                  
Sbjct: 163 HVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK 222

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIH 199
               WN         G F+++   F  M+   +  N+ ++ +VL A   ++    G+ I 
Sbjct: 223 DVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIG 282

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV- 258
            +    GF  G    L NA++++Y +CG+   A K+FD + + DV+ W+  I   C    
Sbjct: 283 SWVRDRGF--GKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340

Query: 259 --EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK----VGFMEVVS 312
             EA  LF+ +   +   N+ T + +L +      L  GK + A+  K     G +  VS
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +  ++I MY KCG V  A  +F  +  +   SWN+MI+G + NG   +AL +F  M+   
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNES 431
             P+  T   +L A + +  ++   +  S + K  G         C+I    +    +E+
Sbjct: 461 FQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA 520

Query: 432 KRVLSEID 439
           K ++  ++
Sbjct: 521 KVLMGNME 528



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 162/326 (49%), Gaps = 10/326 (3%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
            A++  YV  G   DA ++FDEI   DVVSW+  IA         EA   F  ++  D  
Sbjct: 197 TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            N+ TM+++LS+ G  R L  GK I ++    GF + + + NAL+ MY KCG++  AR +
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL 316

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  KD + WN+MI GY     + +AL +F  ML  ++ PN  T  ++L A ++  +L
Sbjct: 317 FDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGAL 376

Query: 394 KQAMQVHSHIIK----SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
                VH++I K    +G + + S+ + +I  Y KC  +  +++V   +  ++    NA+
Sbjct: 377 DLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAM 436

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
            S L        AL L+  +     + +  TF  VL AC     +E G   +  ++   Y
Sbjct: 437 ISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHR-YFSSMNKDY 495

Query: 510 DQDIFVE--SAVIDMYCKCGTIEDAK 533
                ++    +ID+  + G  ++AK
Sbjct: 496 GISPKLQHYGCMIDLLARSGKFDEAK 521



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 186/429 (43%), Gaps = 77/429 (17%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN----------------- 43
           Q+++  +K   HL P + T+LI  +++  + R A R +FD                    
Sbjct: 148 QLHAHALKLALHLHPHVHTSLIHMYSQVGELRHA-RLVFDKSTLRDAVSFTALITGYVSE 206

Query: 44  ---------------RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLV 88
                          +D++++NA+I+G  +  +   AL  F R++   + P+  T  S++
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266

Query: 89  KACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
            ACG L+  E+   +       GF   + LV+  ++ Y+K GEI +A   F    D D +
Sbjct: 267 SACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVI 326

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFG 202
            +  M+ GY     ++++  +F  M    +  N+ +  AVL A   +     G+ +H + 
Sbjct: 327 LWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYI 386

Query: 203 VKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG-- 257
            K    +G  N+++   +I+ +Y +CG    A ++F  +    + SW+  I+  A +G  
Sbjct: 387 DKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHA 446

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
             A GLF+++    FQ ++ T + +LS+                C + GF+E   +G+  
Sbjct: 447 ERALGLFEEMINEGFQPDDITFVGVLSA----------------CTQAGFVE---LGHRY 487

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
            S   K           DY I      +  MI   + +G F++A  +  +M    + P+G
Sbjct: 488 FSSMNK-----------DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM---EMEPDG 533

Query: 378 YTMASILEA 386
               S+L A
Sbjct: 534 AIWGSLLNA 542



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 132/333 (39%), Gaps = 52/333 (15%)

Query: 365 FCHMLEFSLIP----NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           F H L  S  P      +   ++L    +  SLKQ   +HS IIKSG        S LI 
Sbjct: 9   FVHFLPSSDPPYKLLENHPHLNLLAKCPDIPSLKQ---IHSLIIKSGLHNTLFAQSKLI- 64

Query: 421 TYGKCNALNESKRVLSEIDKKNAVH--------INALASVLVYASCHAEALELYRTIWGS 472
              +  AL+ S+ +   +   +++H         N L            +L L+  +  S
Sbjct: 65  ---EFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHS 121

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT---- 528
               N  TF  + K+CA      + K +H  ALK        V +++I MY + G     
Sbjct: 122 GLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHA 181

Query: 529 ---------------------------IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
                                      ++DA+R F +I    +  WNAM+ GY Q G + 
Sbjct: 182 RLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFE 241

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           E    F +M +  V P++ T ++VL++C H   +   +   S + D  G    L+    +
Sbjct: 242 EALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRD-RGFGKNLQLVNAL 300

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           VD+  + G +  A+   D M    D  +W +++
Sbjct: 301 VDMYSKCGEIGTARKLFDGME-DKDVILWNTMI 332


>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 189/557 (33%), Positives = 302/557 (54%), Gaps = 10/557 (1%)

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAAACDG---V 258
           +K  F + + NHL    +N+Y +    L++ K+  E+     VV+W+  IA +      V
Sbjct: 36  LKTPFPAFLYNHL----VNMYAKLDH-LNSAKLILELAPCRSVVTWTALIAGSVQNGCFV 90

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
            A   F D+  +  + N++T   +L +  G R+   GKQ+ A   K G +  V +G ++ 
Sbjct: 91  SALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVF 150

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY K G +NDA  +FD +  ++  +WN+ I+    +G    ++  F  +L     P+  
Sbjct: 151 DMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSI 210

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T    L A S+   L    Q+H  II+SG+  + S+ + LI  YGKC  +  S+ V   +
Sbjct: 211 TFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRM 270

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            ++N+V  ++L +  V  +   +A  L+        E      S VL ACA ++++E G+
Sbjct: 271 GERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGR 330

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
           ++  LA+KA  +Q+IFV SA++DMY KCG+I++A++AF  +   +L  WNA++ GYA  G
Sbjct: 331 SVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQG 390

Query: 559 CYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
             ++   L  +M S  G+ P  ++ +  L++C  AG ++        M + +G+ P  EH
Sbjct: 391 HANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEH 450

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC+VDLLGR G++E A   I +MP PP   IW +LL AC ++G  +LG LA  KL EL 
Sbjct: 451 YACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELD 510

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P +   +V+LSN++A+ G W +V  +R EMKE  + K  G+SWI V    H F A D SH
Sbjct: 511 PKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSH 570

Query: 738 SQSKEIYKELIKLYEHM 754
            +  EI   L KL + M
Sbjct: 571 EKDPEIQDILGKLRKEM 587



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 199/415 (47%), Gaps = 13/415 (3%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           L++ + K      A   L     R ++T+ ALI+G  +      AL  F  +    +RP+
Sbjct: 48  LVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPN 107

Query: 81  AFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            FTF  ++KA   L+ +     +H + +K G  + V++     + Y+K G +  A   F 
Sbjct: 108 DFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFD 167

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKE 194
           +    +   + A +   V +G  + S   F+E+  +G + +  +    L A  D   +  
Sbjct: 168 EMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGP 227

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G Q+HGF ++ G+   V   ++N +++ Y +CG+   +  +FD + E + VSWS  IAA 
Sbjct: 228 GCQLHGFIIRSGYGQNV--SVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAY 285

Query: 255 CDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
               E   A  LF   R  D +  ++ + ++L +  G   +  G+ +QA   K    + +
Sbjct: 286 VQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNI 345

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + +AL+ MYGKCG +++A   F+ +  ++ VSWN+++ GY+  G  N+A+ +   M   
Sbjct: 346 FVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSA 405

Query: 372 S-LIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFLLDDSMISCLITTYGK 424
           + ++P+  ++   L A S +  LK  M++  S   + G        +CL+   G+
Sbjct: 406 AGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGR 460



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 229/468 (48%), Gaps = 23/468 (4%)

Query: 105 LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
           LK  F +  +L +  +  YAK   + SA++          V +TA++ G V NG F  + 
Sbjct: 36  LKTPFPA--FLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSAL 93

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
             F +M S  +  N+F+   VL AS  ++    G+Q+H   VK G ++ V   +  ++ +
Sbjct: 94  LHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDV--FVGCSVFD 151

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQIN 275
           +Y + G   DA K+FDE+   ++ +W+  I+ +       D V AF   + LR    + +
Sbjct: 152 MYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAF--IELLRVGG-KPD 208

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
             T    L++   +  L  G Q+  F  + G+ + VS+ N LI  YGKCG+V  +  +FD
Sbjct: 209 SITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFD 268

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +  ++SVSW+S+IA Y +N    +A  +F    +  + P  + ++S+L A +    ++ 
Sbjct: 269 RMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEF 328

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
              V +  +K+    +  + S L+  YGKC +++ +++  + + ++N V  NAL     +
Sbjct: 329 GRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAH 388

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDI 513
                +A+ L   +  S   +  S  S++  L AC+   DL+ G  I   ++K RY  + 
Sbjct: 389 QGHANKAVALLEEM-TSAAGIVPSYVSLICALSACSRAGDLKTGMKIF-ESMKERYGVEP 446

Query: 514 FVE--SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
             E  + ++D+  + G +E A    +++    +++ W A++     HG
Sbjct: 447 GPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHG 494



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 173/368 (47%), Gaps = 14/368 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L +K G   D  +  ++   ++K      A++   +  +R++ T+NA IS      
Sbjct: 129 QLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHG 188

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           +   ++  F  L   G +PD+ TF   + AC     L     +HG  ++ G+   V + +
Sbjct: 189 RPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSN 248

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I+ Y K GE+  +EM F    + ++V++++++  YV N E +K+  +F+  R   +E 
Sbjct: 249 GLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEP 308

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            +F +++VL A   + E   G  +    VK      +   + +A++++Y +CG   +A +
Sbjct: 309 TDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNI--FVASALVDMYGKCGSIDNAEQ 366

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEY-TMINLLSSVGGER 290
            F+ + E ++VSW+  +   A      +A  L +++      +  Y ++I  LS+     
Sbjct: 367 AFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAG 426

Query: 291 ILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSM 348
            L+ G +I ++   + G          L+ + G+ G V  A      + F  ++S W ++
Sbjct: 427 DLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGAL 486

Query: 349 IAGYSENG 356
           +     +G
Sbjct: 487 LGACRMHG 494



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 7/188 (3%)

Query: 497 GKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           G+A H   LK  +     F+ + +++MY K   +  AK         S+  W A++ G  
Sbjct: 25  GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQ 614
           Q+GC+      F+ M    V+P++ T+  VL +    GL  +     L  ++   GLI  
Sbjct: 85  QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKA--STGLRMDTTGKQLHALAVKEGLIND 142

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +     + D+  ++G L  A    D+MP   +   W + +S   ++G  +  ++A  +LL
Sbjct: 143 VFVGCSVFDMYSKLGFLNDAYKVFDEMP-HRNLETWNAYISNSVLHGRPEDSVIAFIELL 201

Query: 675 EL--QPDN 680
            +  +PD+
Sbjct: 202 RVGGKPDS 209


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/482 (35%), Positives = 272/482 (56%), Gaps = 4/482 (0%)

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           + + + Y M  LL+    +R +R G+++ A   K  ++  V +   LI +Y KC  +  A
Sbjct: 7   EIKFDGYNM--LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCA 64

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           R +FD +  ++ VSW +MI+GYS+ GF ++AL +F  ML     PN +T A++L + +  
Sbjct: 65  RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
              +   Q+HSHI K  +     + S L+  Y K   ++E++ V   + +++ V   A+ 
Sbjct: 125 SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S         EALEL+  +       N  T++ +L A + +  L+ GK +H   L+    
Sbjct: 185 SGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELP 244

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
             + +++++IDMY KCG +  A++ F  +   ++  WNAM++GY++HG   EV  LF  M
Sbjct: 245 FYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLM 304

Query: 571 SKFG-VKPDEITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
            +   VKPD +T+LAVL+ C H GL  +    +   M+    +   +EHY C++DLLGR 
Sbjct: 305 REENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRA 364

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G +E A   I +MP  P A IW SLL AC ++ N ++G   G +LLE++P+N   YV+LS
Sbjct: 365 GRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILS 424

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           NLYASAG W DV  +R+ M EK + KEPG SWI +    H FYA D SH + +E++ ++ 
Sbjct: 425 NLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVR 484

Query: 749 KL 750
           +L
Sbjct: 485 EL 486



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 192/371 (51%), Gaps = 17/371 (4%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           V+EG+++H   +K  +L  V  +L+  ++ LY +C     A  +FDE+ E +VVSW+  I
Sbjct: 26  VREGQRVHAHMIKTCYLPPV--YLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMI 83

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         EA  LF  +  +D + NE+T   +LSS  G      G+QI +  +K  + 
Sbjct: 84  SGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYE 143

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + +G++L+ MY K G++++AR +F+ L  +D VS  ++I+GY++ G   +AL++FC +
Sbjct: 144 NHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRL 203

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               +  N  T AS+L A+S   +L    QVHSH+++        + + LI  Y KC  L
Sbjct: 204 QREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNL 263

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN-----GSTFSI 483
           N ++++ + +  +  +  NA+   LV  S H + +E+ + ++   RE N       TF  
Sbjct: 264 NYARKIFNNMPVRTVISWNAM---LVGYSKHGKGIEVVK-LFKLMREENKVKPDSVTFLA 319

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICR 541
           VL  C+     ++G  +    +    + +  +E    VID+  + G +E+A    +K+  
Sbjct: 320 VLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPF 379

Query: 542 DSLAG-WNAMM 551
           +  A  W +++
Sbjct: 380 EPTAAIWGSLL 390



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 177/357 (49%), Gaps = 15/357 (4%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +++E + VH   +K  +   VYL +  I  Y K   +  A   F +  + + V++TAM+ 
Sbjct: 25  AVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMIS 84

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGF 207
           GY   G   ++  +FV+M     E NEF+   VL      + F++  G QIH    K  +
Sbjct: 85  GYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFEL--GRQIHSHIFKRNY 142

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLF 264
            + +   + ++++++Y + G+  +A  +F+ + E DVVS +  I+         EA  LF
Sbjct: 143 ENHI--FVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELF 200

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
             L+      N  T  +LL+++ G   L  GKQ+ +   +      V + N+LI MY KC
Sbjct: 201 CRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKC 260

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASI 383
           G +N AR IF+ +  +  +SWN+M+ GYS++G   + + +F  M E + + P+  T  ++
Sbjct: 261 GNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAV 320

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
           L   S+     + +++   ++  G  ++  +    C+I   G+   + E+  ++ ++
Sbjct: 321 LSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKM 377



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 209/447 (46%), Gaps = 47/447 (10%)

Query: 1   QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           ++++ +IK  + L P+ LST LI  +TK      A     + + R+++++ A+ISG ++ 
Sbjct: 31  RVHAHMIKTCY-LPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQR 89

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
             +  AL LF ++      P+ FTF++++ +C      E+   +H    K  + + +++ 
Sbjct: 90  GFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVG 149

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK+G I  A   F    + D V+ TA++ GY   G  +++ E+F  ++  G+ 
Sbjct: 150 SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMS 209

Query: 177 LNEFS----LTAVLG-ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
            N  +    LTA+ G A+ D   G+Q+H   ++      V   L N+++++Y +CG    
Sbjct: 210 SNYVTYASLLTALSGLAALD--HGKQVHSHVLRCELPFYVV--LQNSLIDMYSKCGNLNY 265

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLR-FNDFQINEYTMINLLS--S 285
           A K+F+ +    V+SW+  +        G+E   LFK +R  N  + +  T + +LS  S
Sbjct: 266 ARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCS 325

Query: 286 VGG---------ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            GG         + ++  G +I+A     G          +I + G+ G+V +A  +   
Sbjct: 326 HGGLEDKGLEMFDEMMNGGDEIEAGIEHYG---------CVIDLLGRAGRVEEAFELIKK 376

Query: 337 LIFKDSVS-WNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAV 387
           + F+ + + W S++     +   N    + C +LE        + ++ N Y  A   E V
Sbjct: 377 MPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDV 436

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            N + L     V     +S   LD ++
Sbjct: 437 RNVRELMMEKAVIKEPGRSWIELDQTI 463


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 222/758 (29%), Positives = 359/758 (47%), Gaps = 80/758 (10%)

Query: 71  RLRYQGLRPDAFTFSSLVKA---CGSLQENE-IVHGVCLKLGFSSRVYLVSGFIENYAKS 126
           RL   GL    F  ++L+ A   CG+L +   ++ G   +    +   +++G    YAK 
Sbjct: 53  RLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNG----YAKL 108

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-NEFSLTAV 185
           G +  AE  F      D  ++  ++ GY  +G F  + E FV MR  G  L N F+    
Sbjct: 109 GSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCA 168

Query: 186 LGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           + +   +   E   Q+ G   K GF       +   I++++VRCG    A K F +I  P
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGD--PDVATGIVDMFVRCGAVDFASKQFSQIERP 226

Query: 243 -------------------------------DVVSWSERIAA---ACDGVEAFGLFKDLR 268
                                          DVVSW+  ++A   +    EA  +  D+ 
Sbjct: 227 TVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMH 286

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
               +++  T  + L++      L  GKQ+ A   +        + +A++ +Y KCG   
Sbjct: 287 NRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFK 346

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           +AR +F  L  +++VSW  +I G+ + G F+++L++F  M    +  + + +A+I+   S
Sbjct: 347 EARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCS 406

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK------- 441
           N   +  A Q+HS  +KSG      + + LI+ Y KC  L  ++ + S ++++       
Sbjct: 407 NRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTG 466

Query: 442 ------------------------NAVHINALASVLVYASCHAEALELYRTIWGSCREV- 476
                                   N +  NA+    +      + L++Y  +      + 
Sbjct: 467 MLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIP 526

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
           +  T+  + + CA M   + G  I    +K     D  V +AVI MY KCG I +A++ F
Sbjct: 527 DWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIF 586

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
             + R  L  WNAM+ GY+QHG   +   +F+ M K G KPD I+Y+AVL+SC H+GLV+
Sbjct: 587 DFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQ 646

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           E + Y   +   H + P LEH++C+VDLL R G L  AK  ID+MP+ P A +W +LLSA
Sbjct: 647 EGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSA 706

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C  +GN +L  LA   L +L   +   Y+LL+ +YA AG   D  ++RK M++K + K P
Sbjct: 707 CKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNP 766

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           GYSW+ V    H F A D SH Q   I ++L +L E +
Sbjct: 767 GYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKI 804



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 236/523 (45%), Gaps = 83/523 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK----------FADFRRAFRF------------- 37
           Q+  LL K G   DP ++T ++  F +          F+   R   F             
Sbjct: 183 QLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSY 242

Query: 38  -------LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK 89
                  LF++   RD++++N ++S L++  ++  AL +   +  +G+R D+ T++S + 
Sbjct: 243 GVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLT 302

Query: 90  ACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC    SL   + +H   ++       Y+ S  +E YAK G    A   F    D + V+
Sbjct: 303 ACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVS 362

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGV 203
           +T ++ G++  G F +S E+F +MR+  + +++F+L  ++       D+    Q+H   +
Sbjct: 363 WTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSL 422

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD------- 256
           K G    V   ++N+++++Y +CG   +A  +F  + E D+VSW+  + A          
Sbjct: 423 KSGHTRAVV--ISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKA 480

Query: 257 -------------------------GVEAFGL---FKDLRFNDFQINEYTMINLLSSVGG 288
                                    G E  GL      L   D   +  T + L      
Sbjct: 481 REFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCAD 540

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               + G QI     KVG +   S+ NA+I+MY KCG++++AR IFD+L  KD VSWN+M
Sbjct: 541 MGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAM 600

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-----MQVHSHI 403
           I GYS++G   QA+++F  ML+    P+  +  ++L + S+S  +++      M    H 
Sbjct: 601 ITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHN 660

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           +  G        SC++    +   L E+K ++ E+  K    +
Sbjct: 661 VSPGL----EHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEV 699



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 145/623 (23%), Positives = 276/623 (44%), Gaps = 87/623 (13%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG---PALKLFDRL 72
           I    +++ + K      A         RD+ ++N L+SG   + QSG    A++ F  +
Sbjct: 96  ITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSG---YYQSGRFLDAMESFVSM 152

Query: 73  RYQGLR-PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIE------- 121
           R  G   P+AFTF   +K+CG+L  +E+   + G+  K GF     + +G ++       
Sbjct: 153 RRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGA 212

Query: 122 ------------------------NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
                                    YAKS  +  A   F    + D V++  MV     +
Sbjct: 213 VDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQS 272

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH 214
           G   ++  V V+M + G+ L+  + T+ L A   +     G+Q+H   ++   L  +  +
Sbjct: 273 GRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS--LPCIDPY 330

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFN 270
           + +A++ LY +CG   +A ++F  + + + VSW+  I       C   E+  LF  +R  
Sbjct: 331 VASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFS-ESLELFNQMRAE 389

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
              ++++ +  ++S       +   +Q+ +   K G    V I N+LISMY KCG + +A
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNA 449

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENG-------FFN------------------------ 359
            SIF  +  +D VSW  M+  YS+ G       FF+                        
Sbjct: 450 ESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEE 509

Query: 360 QALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
             L M+  ML E  +IP+  T  ++    ++  + K   Q+  H +K G +LD S+++ +
Sbjct: 510 DGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAV 569

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           IT Y KC  ++E++++   + +K+ V  NA+ +         +A+E++  +     + + 
Sbjct: 570 ITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDY 629

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAF 536
            ++  VL +C+    +++GK  +   LK  ++    +E  S ++D+  + G + +AK   
Sbjct: 630 ISYVAVLSSCSHSGLVQEGK-FYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLI 688

Query: 537 RKICRDSLAG-WNAMMMGYAQHG 558
            ++     A  W A++     HG
Sbjct: 689 DEMPMKPTAEVWGALLSACKTHG 711



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 40/292 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL +K+GH    ++S +LIS + K  + + A       + RDI+++  +++  ++  
Sbjct: 416 QLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVG 475

Query: 61  QSGPALKLFDRLRYQ--------------------GLR------------PDAFTFSSLV 88
             G A + FD +  +                    GL+            PD  T+ +L 
Sbjct: 476 NIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLF 535

Query: 89  KACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           + C  +  N++   + G  +K+G      +++  I  Y+K G I  A   F      D V
Sbjct: 536 RGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLV 595

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFG 202
           ++ AM+ GY  +G   ++ E+F +M   G + +  S  AVL +   S  V+EG+      
Sbjct: 596 SWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDML 655

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
            +   +S    H  + +++L  R G  ++A  + DE+  +P    W   ++A
Sbjct: 656 KRDHNVSPGLEHF-SCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSA 706


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 200/684 (29%), Positives = 353/684 (51%), Gaps = 35/684 (5%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           +   ++ C  L+    +H   +    S+ V+L +  +  Y K G + SA   F      +
Sbjct: 30  YRDALRQCQDLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKN 88

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHG 200
           + ++ +M+  Y  NG +  + +++  M    L+ N    T VLGA   +K   EG+ IH 
Sbjct: 89  DYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHS 145

Query: 201 F-----GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
                 G+K+  +      L N+++ +Y +CG   DA ++F+ ++   V SW+  IAA  
Sbjct: 146 RISGTKGLKLDVI------LENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYA 199

Query: 256 DG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 EA  L++D+   D + +  T  ++LS+     +L  G++I A     G    +S
Sbjct: 200 QSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLS 256

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + NAL++MY +C  ++DA  IF  L  +D VSW++MIA ++E   F++A++ +  M    
Sbjct: 257 LQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG 316

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF---LLDDSMISCLITTYGKCNALN 429
           + PN YT AS+L A ++   L+    VH  I+ +G+   L++ + +  L T+YG   +L+
Sbjct: 317 VRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG---SLD 373

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKAC 488
           E++ +  +I+ ++      L             LELYR +  + +       +S V+ AC
Sbjct: 374 EARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISAC 433

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGW 547
           A++      +  H          D  + +++++MY + G +E A++ F K+  RD+LA W
Sbjct: 434 ASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA-W 492

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART-YLSCMS 606
             ++ GYA+HG +     L+ +M   G +P E+T++ VL +C HAGL  + +  ++S  S
Sbjct: 493 TTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQS 552

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           D + + P + HY+CI+DLL R G L  A+  I+ MP+ P+   W SLL A  I+ ++   
Sbjct: 553 D-YAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRA 611

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
             A  ++ +L P + ++YVLLSN++A  G    +  +R  M  + + K  G SWI V   
Sbjct: 612 THAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQ 671

Query: 727 THHFYAGDSSHSQSKEIYKELIKL 750
            H F  GD+SH + +EI+ EL +L
Sbjct: 672 IHEFNVGDNSHPRFQEIFAELQRL 695



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/409 (21%), Positives = 187/409 (45%), Gaps = 27/409 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L+   G  LD  L   L++ + +      A +       RD+++++A+I+  A   
Sbjct: 241 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 300

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A++ + +++ +G+RP+ +TF+S++ AC   G L+    VH   L  G+  ++ LV+
Sbjct: 301 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY--KITLVN 358

Query: 118 G--FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           G   ++ Y   G +  A   F    + D   +T ++ GY   G      E++ EM++   
Sbjct: 359 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 418

Query: 176 ELNE-------FSLTAVLGASFDVKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
                       S  A LGA  D ++    I   G+   F+      L  +++N+Y R G
Sbjct: 419 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV------LATSLVNMYSRWG 472

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLS 284
               A ++FD+++  D ++W+  IA      E   A GL+K++     + +E T + +L 
Sbjct: 473 NLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLY 532

Query: 285 SVGGERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDS 342
           +     +   GKQ+  +          ++  + +I +  + G+++DA  + + + +  + 
Sbjct: 533 ACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPND 592

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNS 390
           V+W+S++     +    +A      + +   + P  Y + S + AV+ +
Sbjct: 593 VTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGN 641


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 271/470 (57%), Gaps = 5/470 (1%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           ++L  G+ + A   +  F   + +GN L++MY KCG + +AR +F+ +  +D V+W ++I
Sbjct: 74  KLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLI 133

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GYS++     AL  F  ML F   PN +T++S+++A +  +      Q+H   +K GF 
Sbjct: 134 SGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +  + S L+  Y +   +++++ V   ++ +N V  NAL +     S   +ALEL++ +
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  +  +++ +  AC++   LEQGK +H   +K+      F  + ++DMY K G+I
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA++ F ++ +  +  WN+++  YAQHG   E    F +M + G++P+EI++L+VLT+C
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E   Y   M    G++P+  HY  +VDLLGR G L  A   I++MPI P A I
Sbjct: 374 SHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W++LL+AC ++ N +LG  A   + EL PD+   +V+L N+YAS G WND  ++RK+MKE
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
             + KEP  SW+ +    H F A D  H Q +EI ++    +E ++A  K
Sbjct: 493 SGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK----WEEVLAKIK 538



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 11/368 (2%)

Query: 80  DAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D   +++L+K C   +   +  IVH   L+  F   + + +  +  YAK G +  A   F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
                 D V +T ++ GY  +     +   F +M   G   NEF+L++V+ A+   +   
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA- 252
            G Q+HGF VK GF S V  H+ +A+++LY R G   DA  +FD +   + VSW+  IA 
Sbjct: 179 CGHQLHGFCVKCGFDSNV--HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236

Query: 253 -AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A   G E A  LF+ +  + F+ + ++  +L  +      L  GK + A+  K G   V
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
              GN L+ MY K G ++DAR IFD L  +D VSWNS++  Y+++GF  +A+  F  M  
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PN  +  S+L A S+S  L +    +  + K G + +      ++   G+   LN 
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416

Query: 431 SKRVLSEI 438
           + R + E+
Sbjct: 417 ALRFIEEM 424



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 186/370 (50%), Gaps = 13/370 (3%)

Query: 198 IHGFGVKVGFLSGVCNH---LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
           I G  V    L  +  H   + N ++N+Y +CG   +A K+F+++ + D V+W+  I+  
Sbjct: 77  IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGY 136

Query: 254 -----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                 CD +  F     LRF  +  NE+T+ +++ +   ER    G Q+  FC K GF 
Sbjct: 137 SQHDRPCDALLFFNQM--LRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +G+AL+ +Y + G ++DA+ +FD L  ++ VSWN++IAG++      +AL++F  M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L     P+ ++ AS+  A S++  L+Q   VH+++IKSG  L     + L+  Y K  ++
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++++++   + K++ V  N+L +         EA+  +  +       N  +F  VL AC
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-W 547
           +    L++G   + L  K     + +    V+D+  + G +  A R   ++  +  A  W
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIW 433

Query: 548 NAMMMGYAQH 557
            A++     H
Sbjct: 434 KALLNACRMH 443



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 12/346 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D ++  TL++ + K      A +       RD +T+  LISG ++  +   AL  F+++ 
Sbjct: 94  DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153

Query: 74  YQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G  P+ FT SS++KA  + +       +HG C+K GF S V++ S  ++ Y + G + 
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A++ F      ++V++ A++ G+      +K+ E+F  M   G   + FS  ++ GA  
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273

Query: 191 D---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               +++G+ +H + +K G    +     N ++++Y + G   DA K+FD + + DVVSW
Sbjct: 274 STGFLEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  + A      G EA   F+++R    + NE + +++L++     +L  G        K
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
            G +        ++ + G+ G +N A R I +  I   +  W +++
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 7/296 (2%)

Query: 369 LEFSLIPNGYTM-ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           LE S IP       ++L+  +  K L Q   VH+HI++S F  D  M + L+  Y KC +
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L E+++V  ++ +++ V    L S         +AL  +  +       N  T S V+KA
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
            AA      G  +H   +K  +D ++ V SA++D+Y + G ++DA+  F  +   +   W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           NA++ G+A+     +   LF  M + G +P   +Y ++  +C   G + + +   + M  
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 608 LHGLIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
                 +L  +A   ++D+  + G +  A+   D++    D   W SLL+A   +G
Sbjct: 291 SG---EKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 180/550 (32%), Positives = 292/550 (53%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMY--------------------------- 321
            +  + G QI     K+G+   + +  +LISMY                           
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 322 ----GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                  G +  AR++FD +  KD VSWN+MI+GY E G + +AL++F  M++ ++ P+ 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM +++ A + S S++   QVHS I   GF  +  +++ LI  Y KC  +  +  +   
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +    + +++IDMY KCG IE A + F  +   SL  WNAM+ G+
Sbjct: 316 RWIHVYIDKRLKGVTNAS-SLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF 374

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG  +   ++F++M K  +KPD+IT++ +L++C HAG++   R     M+  + + P+
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPK 434

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I  M + PD  IW SLL AC ++GN++LG      L 
Sbjct: 435 LEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLF 494

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P+N  +YVLLSN+YA+AG WN+V ++R  + +K + K PG S I +    H F  GD
Sbjct: 495 KIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGD 554

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 555 KFHPRNREIY 564



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 227/504 (45%), Gaps = 78/504 (15%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ- 95
           +F+T Q  +++ +N +  G A       ALKL+  +   GL P+++TF  L+K+C  L+ 
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 96  --ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
             E   +HG  LKLG+   +Y+ +  I  Y ++  +  A   F      D V+YTA+V G
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 154 YV----------------------WN---------GEFDKSKEVFVEMRSLGLELNEFSL 182
           Y                       WN         G + ++ E+F EM    +  +E ++
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 183 TAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
             V+ AS     ++ G Q+H +    GF S +   + NA+++ Y +CG+   A  +F  +
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNL--KIVNALIDFYSKCGEMETACGLFLGL 256

Query: 240 TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           +  DV+SW+  I          EA  LF+++  +    N+ TM+++L +      +  G+
Sbjct: 257 SYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGR 316

Query: 297 QIQAFCYK--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            I  +  K   G     S+  +LI MY KCG +  A  +F+ ++ K   +WN+MI G++ 
Sbjct: 317 WIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAM 376

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +G  N A D+F  M +  + P+  T   +L A S++  L     +  HI +S        
Sbjct: 377 HGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGML----DLGRHIFRS-------- 424

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
                        +  + ++  +++     H   +  +L ++    EA E+  T+     
Sbjct: 425 -------------MTHNYKITPKLE-----HYGCMIDLLGHSGLFKEAEEMISTM---TM 463

Query: 475 EVNGSTFSIVLKACAAMTDLEQGK 498
           E +G  +  +LKAC    ++E G+
Sbjct: 464 EPDGVIWCSLLKACKMHGNVELGE 487



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 179/402 (44%), Gaps = 50/402 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  ++K G+ LD  + T+LIS + +      A +    + +RD+++Y AL++G A   
Sbjct: 84  QIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRG 143

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF  +    +RPD  T  +++ 
Sbjct: 144 YIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVIS 203

Query: 90  A---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           A    GS++    VH      GF S + +V+  I+ Y+K GE+ +A   F      D ++
Sbjct: 204 ASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVIS 263

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
           +  ++ GY     + ++  +F EM   G   N+ ++ ++L A     + D+  G  IH +
Sbjct: 264 WNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI--GRWIHVY 321

Query: 202 GVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
             K   L GV N   L  +++++Y +CG    A ++F+ +    + +W+  I   A    
Sbjct: 322 IDKR--LKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGR 379

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGN 315
              AF +F  +R N+ + ++ T + LLS+     +L  G+ I ++  +       +    
Sbjct: 380 ANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYG 439

Query: 316 ALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
            +I + G  G   +A  +   +  + D V W S++     +G
Sbjct: 440 CMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 179/569 (31%), Positives = 314/569 (55%), Gaps = 17/569 (2%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF-DEITEPDVVSWSE 249
           ++ +G+Q+H   +  GF     +    +++N+Y +CGQ  +A+ +F D   E +V +++ 
Sbjct: 26  NLNKGKQLHSLMITYGFSPSPPS--ITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNA 83

Query: 250 RIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I+    +G+  + F  +K +R      ++YT   ++ +     ++   K+I     K+G
Sbjct: 84  IISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCC--EVMEV-KKIHGCLLKMG 140

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               V +G+AL++ Y K G + DA+ +F  L  +D V WN+MI GY++ G  ++AL++F 
Sbjct: 141 LELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFR 200

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M    + P+ +T+  IL   ++   L     VH  ++K G+    S+ + LI  YGKC 
Sbjct: 201 RMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCK 260

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            + ++  +   I++K+    N++ SV      H   L L+  + GS    +  T + VL 
Sbjct: 261 HIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLP 320

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQD--------IFVESAVIDMYCKCGTIEDAKRAFRK 538
           AC+ +  L  G+ IH   +     +D        + V +AV+DMY KCG++ +A + F  
Sbjct: 321 ACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDS 380

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           + +  +A WN M+MGY  HG   E   +F++M +   KP+E+T + VL++C HAG V   
Sbjct: 381 MSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHG 440

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           R +L+ M    G+IP +EHY C++D+LGR G LE A   + +MPI  +  +W++LL AC 
Sbjct: 441 RLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACR 500

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           ++GN +L  +A  ++L+L+P++  +YVL+SN+Y   G + +V ++RK MKE+ + K PG 
Sbjct: 501 LHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGC 560

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SWI +    H F  GD +HS+   +  +L
Sbjct: 561 SWIELKDGVHVFRTGDRTHSELNALTNQL 589



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 239/490 (48%), Gaps = 37/490 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q++SL+I  G    P   T+LI+ ++K      A    +D    R++  YNA+ISG    
Sbjct: 32  QLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSN 91

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             +    + + ++R +G+ PD +TF  +V+ C  + E + +HG  LK+G    V++ S  
Sbjct: 92  GLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCLLKMGLELDVFVGSAL 151

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y K+G +  A+  F +    D V + AM+ GY   G  D++ EVF  M   G+  + 
Sbjct: 152 VNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSR 211

Query: 180 FSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F++T +L    +  D+  G+ +HG  +K+G+ SGV   ++NA++++Y +C    DA+ +F
Sbjct: 212 FTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVS--VSNALIDMYGKCKHIGDALIIF 269

Query: 237 DEITEPDVVSWSERIAA--AC-DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           + I E D+ SW+  I+    C D      LF  +  +    +  T+  +L +      L 
Sbjct: 270 EMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALM 329

Query: 294 AGKQIQAFCY--------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
            G++I  +          + G ++ + + NA++ MY KCG +N+A  IFD +  KD  SW
Sbjct: 330 HGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASW 389

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N MI GY  +G+  +AL MF  M E    PN  T+  +L A +++  +       + +  
Sbjct: 390 NIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMES 449

Query: 406 S-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G +      +C+I   G+   L ++     EI +K  +  N +               
Sbjct: 450 TFGVIPTIEHYTCVIDMLGRAGHLEDA----YEIVQKMPIQANPV--------------- 490

Query: 465 LYRTIWGSCR 474
           ++R + G+CR
Sbjct: 491 VWRALLGACR 500



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 237/481 (49%), Gaps = 18/481 (3%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD-CLDLDNVAYTAMV 151
           +L + + +H + +  GFS     ++  I  Y+K G++  A + F D C + +  AY A++
Sbjct: 26  NLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAII 85

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGV 211
            G+V NG   K  + + +MR  G+  ++++   V+    +V E ++IHG  +K+G    V
Sbjct: 86  SGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCLLKMGLELDV 145

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLR 268
              + +A++N Y++ G   DA K+F E++  DVV W+  I   A  G   EA  +F+ + 
Sbjct: 146 --FVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMH 203

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
                 + +T+  +LS       L  GK +     K+G+   VS+ NALI MYGKC  + 
Sbjct: 204 VKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIG 263

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           DA  IF+ +  KD  SWNS+I+ + + G  +  L +F  ML   ++P+  T+ ++L A S
Sbjct: 264 DALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACS 323

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDS--------MISCLITTYGKCNALNESKRVLSEIDK 440
           +  +L    ++H ++I +G   DD         + + ++  Y KC ++N + ++   + K
Sbjct: 324 HLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSK 383

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           K+    N +           EAL ++  +  +  + N  T   VL AC     +  G+ +
Sbjct: 384 KDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGR-L 442

Query: 501 HCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQH 557
               +++ +     +E  + VIDM  + G +EDA    +K+  + +   W A++     H
Sbjct: 443 FLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLH 502

Query: 558 G 558
           G
Sbjct: 503 G 503



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 196/418 (46%), Gaps = 19/418 (4%)

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLI 338
           +  L S    + L  GKQ+ +     GF        +LI+MY KCGQ+ +A  +F D   
Sbjct: 15  VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            ++  ++N++I+G+  NG  ++    +  M    ++P+ YT   ++        +K   +
Sbjct: 75  ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---K 131

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H  ++K G  LD  + S L+ TY K  ++ ++++V  E+  ++ V  NA+ +      C
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191

Query: 459 HAEALELYRTIWGSCREVNGSTFSI--VLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
             EALE++R +    + V  S F+I  +L   A+  DL+ GK +H + +K  YD  + V 
Sbjct: 192 LDEALEVFRRM--HVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVS 249

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+IDMY KC  I DA   F  I    +  WN+++  + Q G +     LF+KM   G+ 
Sbjct: 250 NALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 309

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCM-------SDLHGLIPQLEHYACIVDLLGRVG 629
           PD +T   VL +C H   +   R     M        D +G +  L     ++D+  + G
Sbjct: 310 PDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCG 369

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI--DLGLLAGSKLLELQPDNESTYV 685
            +  A    D M    D   W  ++    ++G     LG+ +     E +P NE T V
Sbjct: 370 SMNNALKIFDSMS-KKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKP-NEVTLV 425


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 199/670 (29%), Positives = 332/670 (49%), Gaps = 60/670 (8%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SLQ+ + +H   +K   SS VY+ +  +  YAK   +  A+  F    + D V++  ++ 
Sbjct: 21  SLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79

Query: 153 GYVWNGEFDKSK--EVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGF 207
           GY  +G    S   E+F  MR+     N  +   V  A+    D   G   H   +K+  
Sbjct: 80  GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLF 264
              V   + +++MN+Y + G   +A K+FD + E + VSW+  I+         EA GLF
Sbjct: 140 CRDV--FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLF 197

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + +R  +   NE+   ++LS++    ++  GKQI     K G + +VS+GNAL++MY KC
Sbjct: 198 RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKC 257

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G ++DA   F+    K+S++W++MI G +++G  ++AL +F  M    + P+ +T   ++
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A S+  +  +  QVH +++K GF     +++ L+  Y KC+++ ++++    + + + V
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIV 377

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              ++    V    + +AL LY  +       N  T + VLKAC+++  LEQGK IH   
Sbjct: 378 LWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHART 437

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K  +  ++ + SA+  MY KCG ++D    FR++    +  WNAM+ G +Q+GC  E  
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEAL 497

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF +M   G KPD +T++ +L++C H GLV     Y   M D  G+ P++EHYAC+VD+
Sbjct: 498 ELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDI 557

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           L R G L+ A                       T    ID G                  
Sbjct: 558 LSRAGKLKEA--------------------IEFTESATIDHG------------------ 579

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
                      MW DV ++R+ MK + + KEPG SWI +    H F   D  H Q  +I+
Sbjct: 580 -----------MWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIH 628

Query: 745 KELIKLYEHM 754
            EL +L + M
Sbjct: 629 VELRQLSKQM 638



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 177/620 (28%), Positives = 299/620 (48%), Gaps = 57/620 (9%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPA--LKLFDRLR 73
           ++ +L++ + K    R A +F+F+  QN+D++++N +I+G ++   SG +  ++LF R+R
Sbjct: 42  IANSLVNLYAKCQRLREA-KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMR 100

Query: 74  YQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            +   P+A TF+ +  A  +L +     + H V +K+     V++ S  +  Y K+G   
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTP 160

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-- 188
            A   F    + ++V++  M+ GY       ++  +F  MR      NEF  T+VL A  
Sbjct: 161 EARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220

Query: 189 -SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               V  G+QIH   VK G LS V   + NA++ +Y +CG   DA++ F+  ++ + ++W
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVS--VGNALVTMYAKCGSLDDALQTFETSSDKNSITW 278

Query: 248 SERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           S  I   A + D  +A  LF  +  +  + +E+T + ++++         GKQ+  +  K
Sbjct: 279 SAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK 338

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +GF   + +  AL+ MY KC  + DAR  FDYL   D V W SMI GY +NG    AL +
Sbjct: 339 LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSL 398

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           +  M    ++PN  TMAS+L+A S+  +L+Q  Q+H+  +K GF L+  + S L T Y K
Sbjct: 399 YGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAK 458

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
           C  L +   V   +  ++ +  NA+ S L    C  EALEL+  +     + +  TF  +
Sbjct: 459 CGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNI 518

Query: 485 LKACAAMTDLEQGKA---------------------IHCLALKARYDQDI-FVESAVIDM 522
           L AC+ M  +E+G                       +  L+   +  + I F ESA ID 
Sbjct: 519 LSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDH 578

Query: 523 YCKCGTIEDAKRA-----FRKICRDSLAGWNAMMMG----------YAQHGCYH-EVSNL 566
               G  ED +R       R + ++    W  +  G          + Q G  H E+  L
Sbjct: 579 ----GMWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQL 634

Query: 567 FNKMSKFGVKPDEITYLAVL 586
             +M   G +P   ++ A L
Sbjct: 635 SKQMKDEGYEPATDSFSAAL 654



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 208/398 (52%), Gaps = 15/398 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQ 61
           +++ IK     D  + ++L++ + K A      R +FDT   R+ +++  +ISG A    
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCK-AGLTPEARKVFDTMPERNSVSWATMISGYASQKL 189

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE----NEIVHGVCLKLGFSSRVYLVS 117
           +  AL LF  +R +    + F F+S++ A  +L E     + +H + +K G  S V + +
Sbjct: 190 AAEALGLFRLMRREEEGENEFVFTSVLSAL-TLPELVNNGKQIHCIAVKNGLLSIVSVGN 248

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAK G +  A   F    D +++ ++AM+ G   +G+ DK+ ++F  M   G+  
Sbjct: 249 ALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRP 308

Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +EF+   V+ A  D+    EG+Q+H + +K+GF S +  ++  A++++Y +C   +DA K
Sbjct: 309 SEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQI--YVMTALVDMYAKCSSIVDARK 366

Query: 235 MFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            FD + EPD+V W+  I       E   A  L+  +       NE TM ++L +      
Sbjct: 367 GFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAA 426

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GKQI A   K GF   V IG+AL +MY KCG + D   +F  +  +D +SWN+MI+G
Sbjct: 427 LEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISG 486

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
            S+NG   +AL++F  M      P+  T  +IL A S+
Sbjct: 487 LSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSH 524



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++  L+K G      + T L+  + K     D R+ F +L   Q  DI+ + ++I G  
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL---QEPDIVLWTSMIGGYV 387

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVY 114
           +  ++  AL L+ R+  +G+ P+  T +S++KAC S   L++ + +H   +K GF   V 
Sbjct: 388 QNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVP 447

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S     YAK G +    + FR     D +++ AM+ G   NG   ++ E+F EM+  G
Sbjct: 448 IGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEG 507

Query: 175 LELNEFSLTAVLGA 188
            + +  +   +L A
Sbjct: 508 TKPDYVTFVNILSA 521


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 178/509 (34%), Positives = 279/509 (54%), Gaps = 15/509 (2%)

Query: 250 RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
           R   A D +E  G+F D       I    +I   S+ G    ++ GK++    +  G+  
Sbjct: 38  RAMRAMDAMERHGVFAD------AITYSELIKCCSARGA---VQEGKRVHEHIFCKGYEP 88

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + N L++MY K   + +A  +FD +  ++ VSW +MI+ YS N   ++AL     M 
Sbjct: 89  KMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMF 147

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              + PN +T +S+L A     +L+Q   +H  IIK+G   D  + S LI  Y K + L+
Sbjct: 148 REGVRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLD 204

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +  V  E+  ++ V  N++       S   EAL L++ +  +    + +T + VL+AC 
Sbjct: 205 NALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  LE G+ +H   LK  +DQD+ + +A+IDMYCKCG++EDA  AF ++    +  W+ 
Sbjct: 265 GLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWST 322

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ G AQ+G   +   LF  M + G +P+ IT L VL +C HAGLV +   Y   M  L 
Sbjct: 323 MVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLF 382

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G+ P  EHY C++DLLGR G L+ A   I +M   PD+  W++LL AC ++ N+DL + A
Sbjct: 383 GVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYA 442

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
             K++EL+P++  TY+LLSN+YA+   W DV ++RK M  + + K PG SWI V    H 
Sbjct: 443 AKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHV 502

Query: 730 FYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           F  GD+SH + +EI + L  L E ++   
Sbjct: 503 FILGDTSHPKIEEIVQRLNDLIERVMGVG 531



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 228/461 (49%), Gaps = 44/461 (9%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDA 81
            +K    +   R++ D         + L++  A FC       A++  D +   G+  DA
Sbjct: 4   ISKLKGMKPPLRYVADP--------SPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADA 55

Query: 82  FTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
            T+S L+K C   G++QE + VH      G+  ++++V+  +  Y K   +  AE  F +
Sbjct: 56  ITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDE 115

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQI 198
             + + V++T M+  Y  N   DK+ +  + M   G+  N F+ ++VL A   +    Q+
Sbjct: 116 MPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQL 174

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAAC 255
           H   +K G  S V   + +A++++Y +     +A+ +FDE+   D+V W+  I   A   
Sbjct: 175 HCGIIKTGLESDV--FVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNS 232

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           DG EA  LFK ++   F  ++ T+ ++L +  G  +L  G+Q+     K  F + + + N
Sbjct: 233 DGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNN 290

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI MY KCG + DA S F  ++ KD +SW++M+AG ++NG+  QAL++F  M E    P
Sbjct: 291 ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRP 350

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKR 433
           N  T+  +L A S++  L +    +   +K  F +D       CLI   G+   L+E+ +
Sbjct: 351 NYITVLGVLFACSHA-GLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVK 409

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           ++ E++                  C  +++  +RT+ G+CR
Sbjct: 410 LIHEME------------------CEPDSVT-WRTLLGACR 431



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 179/364 (49%), Gaps = 23/364 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +   G+     +  TL++ + KF     A     +   R+++++  +IS  +   
Sbjct: 76  RVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKL 135

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               ALK    +  +G+RP+ FT+SS+++AC  L     +H   +K G  S V++ S  I
Sbjct: 136 ND-KALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALI 194

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + Y+K  ++ +A   F +    D V + +++ G+  N + +++  +F  M+  G   ++ 
Sbjct: 195 DVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQA 254

Query: 181 SLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +LT+VL A      ++ G Q+H   +K  F   +   LNNA++++Y +CG   DA   F 
Sbjct: 255 TLTSVLRACTGLALLELGRQVHVHVLK--FDQDLI--LNNALIDMYCKCGSLEDANSAFS 310

Query: 238 EITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            + E DV+SWS  +A  A +G   +A  LF+ ++ +  + N  T++ +L +        A
Sbjct: 311 RMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS-----HA 365

Query: 295 GKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDA-RSIFDYLIFKDSVSWNS 347
           G   + + Y     ++  +         LI + G+ G++++A + I +     DSV+W +
Sbjct: 366 GLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRT 425

Query: 348 MIAG 351
           ++  
Sbjct: 426 LLGA 429



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 150/314 (47%), Gaps = 12/314 (3%)

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A +      ++A+     M    +  +  T + +++  S   ++++  +VH HI   G+ 
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS-CHAEALELYRT 468
               +++ L+  Y K N L E++ +  E+ ++N V    + S   Y++  + +AL+    
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMIS--AYSNKLNDKALKCLIL 145

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           ++      N  T+S VL+AC  + +L Q   +HC  +K   + D+FV SA+ID+Y K   
Sbjct: 146 MFREGVRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSD 202

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +++A   F ++    L  WN+++ G+AQ+   +E  NLF +M + G   D+ T  +VL +
Sbjct: 203 LDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRA 262

Query: 589 CCHAGLVREAR-TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           C    L+   R  ++  +     LI        ++D+  + G LE A     +M +  D 
Sbjct: 263 CTGLALLELGRQVHVHVLKFDQDLILN----NALIDMYCKCGSLEDANSAFSRM-VEKDV 317

Query: 648 HIWQSLLSACTIYG 661
             W ++++     G
Sbjct: 318 ISWSTMVAGLAQNG 331


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 202/653 (30%), Positives = 336/653 (51%), Gaps = 27/653 (4%)

Query: 87  LVKACGSLQENEIVHGVCLK------LG-FSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           L+ +CG+L    ++H   L       LG   +R  L+S     YA  G++ SA M F   
Sbjct: 35  LLPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSC----YAALGDLASARMVFDGT 90

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR---SLGLELNEFSLTAVLGA---SFDVK 193
              D  +Y  M+   V      ++  +  +MR         ++F L+  L A   S D  
Sbjct: 91  PRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYG 150

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G ++H   VKVG   G    + N+++++Y + G    A K+F+ I   +VVSW+  ++ 
Sbjct: 151 YGTRLHCDAVKVG---GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSG 207

Query: 254 AC-DGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
              +G  A GL  F  +R ++   +EYT+  ++++      L  G+ +     K G M  
Sbjct: 208 CVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSN 267

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             I  AL+ MY KCG++ DA+ +FD L + D V W +MI GY++NG    AL +F     
Sbjct: 268 SFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKF 327

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            +++PN  T+A++L A +  + L     +H   +K G +    +++ L+  Y KC A++E
Sbjct: 328 ANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSE 387

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV--LKAC 488
           + R+   I  K+ V  N++ S     +   +AL L++ +  S +  +    S+V  L A 
Sbjct: 388 ANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQM--SLKGPSPDAISVVHALSAS 445

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
             + DL  GK+ H  A+K  +  +I+V +A++++Y KCG +  A+R F ++   +   W 
Sbjct: 446 VCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWC 505

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           AM+ GY   G      +LF +M K GV P+++ + ++L++C H G+V  A+ Y   M+  
Sbjct: 506 AMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQH 565

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
             + P ++HYAC+VD+L R G LE A   ID MP+  D  +W + L  C ++  +  G  
Sbjct: 566 FNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEE 625

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           A  +++ L P+    YVL+SNLY S GMW     +R+ M+EK L K PGYS I
Sbjct: 626 AIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 212/429 (49%), Gaps = 14/429 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +  +L+  + K  D   A +       R+++++ +++SG  +   +   L LF+++R
Sbjct: 166 DGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMR 225

Query: 74  YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
              + P  +T ++++ AC +   L +   +HG  +K G  S  ++ +  ++ Y K GE+ 
Sbjct: 226 QDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELE 285

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A+  F +   +D V +T M+ GY  NG    +  +F++ +   +  N  ++  VL AS 
Sbjct: 286 DAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASA 345

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            +++   G  IHG  VK+G +      + NA++++Y +C    +A ++F  I+  DVV+W
Sbjct: 346 QLRDLSLGRSIHGIAVKLGLVEYTV--VVNALVDMYAKCQAVSEANRIFGSISNKDVVAW 403

Query: 248 SERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  ++   +     +A  LFK +       +  ++++ LS+      L  GK    +  K
Sbjct: 404 NSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVK 463

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
             F+  + +  AL+++Y KCG +  AR +FD +  ++SV+W +MI GY   G    ++D+
Sbjct: 464 HAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDL 523

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTY 422
           F  ML+  + PN     SIL   S++  +  A +    + +  F +  SM   +C++   
Sbjct: 524 FGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQH-FNITPSMKHYACMVDVL 582

Query: 423 GKCNALNES 431
            +   L E+
Sbjct: 583 ARAGNLEEA 591



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 189/422 (44%), Gaps = 24/422 (5%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           +IK G   +  +S  L+  + K  +   A     +    D++ +  +I G  +      A
Sbjct: 259 VIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDA 318

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIEN 122
           L+LF   ++  + P++ T ++++ A   L++  +   +HG+ +KLG      +V+  ++ 
Sbjct: 319 LRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDM 378

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAK   +  A   F    + D VA+ +M+ GY  N   + +  +F +M   G   +  S+
Sbjct: 379 YAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISV 438

Query: 183 TAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
              L AS    D+  G+  HG+ VK  FLS +  +++ A++NLY +CG    A ++FDE+
Sbjct: 439 VHALSASVCLGDLLIGKSFHGYAVKHAFLSNI--YVSTALLNLYNKCGDLPSARRVFDEM 496

Query: 240 TEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
            + + V+W   I       D   +  LF ++  +    N+    ++LS+     ++ A K
Sbjct: 497 NDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAK 556

Query: 297 Q-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAG--- 351
           +   +          +     ++ +  + G + +A    D +  + D+  W + + G   
Sbjct: 557 RYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCEL 616

Query: 352 YSENGFFNQALD--MFCHMLE---FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +S   F  +A+   M  H      + LI N YT   + E    S+++++ MQ    +   
Sbjct: 617 HSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWE---KSQAIRRWMQEKGLVKLP 673

Query: 407 GF 408
           G+
Sbjct: 674 GY 675



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 3/188 (1%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ + +K G     ++   L+  + K      A R      N+D++ +N+++SG A    
Sbjct: 356 IHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNM 415

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL LF ++  +G  PDA +    + A    G L   +  HG  +K  F S +Y+ + 
Sbjct: 416 CNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTA 475

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y K G++ SA   F +  D ++V + AM+ GY   G+   S ++F EM   G+  N
Sbjct: 476 LLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPN 535

Query: 179 EFSLTAVL 186
           + + T++L
Sbjct: 536 DVAFTSIL 543


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 200/684 (29%), Positives = 360/684 (52%), Gaps = 16/684 (2%)

Query: 84  FSSLVKACGSLQENEIVHGV---CLKL-GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           +  + KA   L +  +VH +   C  L GF S     +  ++ Y K+G + SA   F   
Sbjct: 37  YHQMKKAGAQLTDPTLVHSILKACSSLPGFDSLTSTGNSVLDFYMKTGALDSALFVFDSM 96

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGE 196
              D+V++  M+ G++  G  DK    F + R +  E N  +L   + A   +   +EG 
Sbjct: 97  RSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGL 156

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           ++HG+ ++ GFL      + N+++++Y     +  A ++FDE+ E DV+SWS  I     
Sbjct: 157 KMHGYIIRSGFLD--IPSVQNSLLSMYADNDME-RAEELFDEMCERDVISWSVMIGGYVQ 213

Query: 257 GVEA---FGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
             EA     LF ++  N   +++  TM+++L +      +  G+ +       G    + 
Sbjct: 214 TGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLF 273

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +GN++I MY KC     A   F+ +  +++VSWNS+I+G       ++AL +F  M +  
Sbjct: 274 VGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 333

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
              +  T+ ++L++        Q   +HS +I+ G+ L++ +I+ LI  Y KC+ +  + 
Sbjct: 334 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 393

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           ++   +  K+ V  +A+ +   +     EA+ L++ +  +  + NG T   +L+A +   
Sbjct: 394 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 453

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
           DL++ K  H +A++     ++ V +A++DMY KCG I  +++AF +I   ++  W AM+ 
Sbjct: 454 DLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIA 513

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
               +G   +   L ++M   G+KP+ +T L+VL++C H GLV E  ++   M   HG+ 
Sbjct: 514 ACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVE 573

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMP--IPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           P LEHY+C+VD+L R G L  A   I++MP  +   A +W +LLSAC   GN  LG  A 
Sbjct: 574 PGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAA 633

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
            ++LEL+P + + Y L S++YA++G+W D  ++R  +K + +    GYS +HV      F
Sbjct: 634 FRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRF 693

Query: 731 YAGDSSHSQSKEIYKELIKLYEHM 754
            AGD SH ++ EI+  + +L++ M
Sbjct: 694 VAGDESHPRAGEIWGVVEQLHDCM 717



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/549 (23%), Positives = 237/549 (43%), Gaps = 55/549 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +I++G    P +  +L+S +    D  RA     +   RD+I+++ +I G  +  
Sbjct: 157 KMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTG 215

Query: 61  QSGPALKLFDRLRYQG-LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
           ++  AL+LF  +     +  D  T  S++KAC   G +     VHGV +  G    +++ 
Sbjct: 216 EAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVG 275

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ Y+K  +  SA   F +    + V++ +++ G V   +  ++  +F  M   G  
Sbjct: 276 NSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFR 335

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +E +L  +L +     D  + + IH   ++ G+   +   + N++++ Y +C     A 
Sbjct: 336 ADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGY--ELNEFVINSLIDAYSKCDLIELAW 393

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FD +   D VSWS  IA         EA  LF+++     + N  T+++LL +     
Sbjct: 394 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 453

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L+  K       + G    V++G A++ MY KCG++  +R  FD +  K+ VSW +MIA
Sbjct: 454 DLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIA 513

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-----VHSHIIK 405
               NG    AL +   M    L PN  T  S+L A S+   +++ +      V  H ++
Sbjct: 514 ACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVE 573

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G        SC++    +   LN +  ++ ++ ++                   +   L
Sbjct: 574 PGL----EHYSCMVDMLSRAGKLNSAMNLIEKMPER-----------------MRDGAGL 612

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +  +CR    S              L  G A   L L+ +     F+ S+   MY  
Sbjct: 613 WGALLSACRSSGNSR-------------LGAGAAFRVLELEPQSSAGYFLASS---MYAA 656

Query: 526 CGTIEDAKR 534
            G   DA R
Sbjct: 657 SGLWADAAR 665


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 271/470 (57%), Gaps = 5/470 (1%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           ++L  G+ + A   +  F   + +GN L++MY KCG + +AR +F+ +  +D V+W ++I
Sbjct: 74  KLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLI 133

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GYS++     AL  F  ML F   PN +T++S+++A +  +      Q+H   +K GF 
Sbjct: 134 SGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +  + S L+  Y +   +++++ V   ++ +N V  NAL +     S   +ALEL++ +
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  +  +++ +  AC++   LEQGK +H   +K+      F  + ++DMY K G+I
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            DA++ F ++ +  +  WN+++  YAQHG   E    F +M + G++P+EI++L+VLT+C
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GL+ E   Y   M    G++P+  HY  +VDLLGR G L  A   I++MPI P A I
Sbjct: 374 SHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W++LL+AC ++ N +LG  A   + EL PD+   +V+L N+YAS G WND  ++RK+MKE
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
             + KEP  SW+ +    H F A D  H Q +EI ++    +E ++A  K
Sbjct: 493 SGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK----WEEVLAKIK 538



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 11/368 (2%)

Query: 80  DAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D   +++L+K C   +   +  IVH   L+  F   + + +  +  YAK G +  A   F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
                 D V +T ++ GY  +     +   F +M   G   NEF+L++V+ A+   +   
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA- 252
            G Q+HGF VK GF S V  H+ +A+++LY R G   DA  +FD +   + VSW+  IA 
Sbjct: 179 CGHQLHGFCVKCGFDSNV--HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236

Query: 253 -AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A   G E A  LF+ +  + F+ + ++  +L  +      L  GK + A+  K G   V
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
              GN L+ MY K G ++DAR IFD L  +D VSWNS++  Y+++GF  +A+  F  M  
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PN  +  S+L A S+S  L +    +  + K G + +      ++   G+   LN 
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416

Query: 431 SKRVLSEI 438
           + R + E+
Sbjct: 417 ALRFIEEM 424



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 186/370 (50%), Gaps = 13/370 (3%)

Query: 198 IHGFGVKVGFLSGVCNH---LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
           I G  V    L  +  H   + N ++N+Y +CG   +A K+F+++ + D V+W+  I+  
Sbjct: 77  IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGY 136

Query: 254 -----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                 CD +  F     LRF  +  NE+T+ +++ +   ER    G Q+  FC K GF 
Sbjct: 137 SQHDRPCDALLFFNQM--LRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +G+AL+ +Y + G ++DA+ +FD L  ++ VSWN++IAG++      +AL++F  M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L     P+ ++ AS+  A S++  L+Q   VH+++IKSG  L     + L+  Y K  ++
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++++++   + K++ V  N+L +         EA+  +  +       N  +F  VL AC
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-W 547
           +    L++G   + L  K     + +    V+D+  + G +  A R   ++  +  A  W
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIW 433

Query: 548 NAMMMGYAQH 557
            A++     H
Sbjct: 434 KALLNACRMH 443



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 12/346 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D ++  TL++ + K      A +       RD +T+  LISG ++  +   AL  F+++ 
Sbjct: 94  DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153

Query: 74  YQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G  P+ FT SS++KA  + +       +HG C+K GF S V++ S  ++ Y + G + 
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A++ F      ++V++ A++ G+      +K+ E+F  M   G   + FS  ++ GA  
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273

Query: 191 D---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               +++G+ +H + +K G    +     N ++++Y + G   DA K+FD + + DVVSW
Sbjct: 274 STGFLEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  + A      G EA   F+++R    + NE + +++L++     +L  G        K
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
            G +        ++ + G+ G +N A R I +  I   +  W +++
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 7/296 (2%)

Query: 369 LEFSLIPNGYTM-ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           LE S IP       ++L+  +  K L Q   VH+HI++S F  D  M + L+  Y KC +
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L E+++V  ++ +++ V    L S         +AL  +  +       N  T S V+KA
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
            AA      G  +H   +K  +D ++ V SA++D+Y + G ++DA+  F  +   +   W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           NA++ G+A+     +   LF  M + G +P   +Y ++  +C   G + + +   + M  
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 608 LHGLIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
                 +L  +A   ++D+  + G +  A+   D++    D   W SLL+A   +G
Sbjct: 291 SG---EKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342


>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
 gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 299/588 (50%), Gaps = 11/588 (1%)

Query: 166 VFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +F EM+  G E N F+   V  A     DV   E +H   +K  F S V   +  A +++
Sbjct: 39  LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDV--FVGTATVDM 96

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTM 279
           +V+C     A K+F+ + E D  +W+  ++  C      +AF LF+++R N+   +  T+
Sbjct: 97  FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTV 156

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           + L+ S   E+ L+  + + A   ++G    V++ N  IS YGKCG ++ A+ +F+ +  
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216

Query: 340 KDS--VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
            D   VSWNSM   YS  G    A  ++C ML     P+  T  ++  +  N ++L Q  
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
            +HSH I  G   D   I+  I+ Y K      ++ +   +  +  V    + S      
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA-LKARYDQDIFVE 516
              EAL L+  +  S  + +  T   ++  C     LE GK I   A +      ++ + 
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+IDMY KCG+I +A+  F      ++  W  M+ GYA +G + E   LF+KM     K
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+ IT+LAVL +C H+G + +   Y   M  ++ + P L+HY+C+VDLLGR G LE A  
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  M   PDA IW +LL+AC I+ N+ +   A   L  L+P   + YV ++N+YA+AGM
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 576

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           W+   ++R  MK++ + K PG S I V G  H F  G+  H +++ IY
Sbjct: 577 WDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 28/507 (5%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIE 121
           +L LF  ++  G  P+ FTF  + KAC  L +    E+VH   +K  F S V++ +  ++
Sbjct: 36  SLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVD 95

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            + K   +  A   F    + D   + AM+ G+  +G  DK+  +F EMR     LNE +
Sbjct: 96  MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR-----LNEIT 150

Query: 182 ------LTAVLGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
                 +T +  ASF+  +K  E +H  G+++G    V   + N  ++ Y +CG  LD+ 
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT--VANTWISTYGKCGD-LDSA 207

Query: 234 KM-FDEITEPD--VVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           K+ F+ I   D  VVSW+    A     +  +AFGL+  +   +F+ +  T INL +S  
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 267

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  G+ I +    +G  + +   N  ISMY K      AR +FD +  +  VSW  
Sbjct: 268 NPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTV 327

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI+GY+E G  ++AL +F  M++    P+  T+ S++       SL+    + +     G
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387

Query: 408 FLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
              D+ MI + LI  Y KC +++E++ +     +K  V    + +         EAL+L+
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCK 525
             +     + N  TF  VL+ACA    LE+G +  H +         +   S ++D+  +
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507

Query: 526 CGTIEDAKRAFRKICRDSLAG-WNAMM 551
            G +E+A    R +     AG W A++
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALL 534



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 223/457 (48%), Gaps = 23/457 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ LIK+    D  + T  +  F K      A +       RD  T+NA++SG   FCQ
Sbjct: 74  VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG---FCQ 130

Query: 62  SG---PALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYL 115
           SG    A  LF  +R   + PD+ T  +L+++     SL+  E +H V ++LG   +V +
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190

Query: 116 VSGFIENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGE-FDKSKEVFVEMR- 171
            + +I  Y K G++ SA++ F   D  D   V++ +M   Y   GE FD      + +R 
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250

Query: 172 SLGLELNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
               +L+ F +L A       + +G  IH   + +G    +     N  +++Y +     
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDI--EAINTFISMYSKSEDTC 308

Query: 231 DAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A  +FD +T    VSW+  I   A   D  EA  LF  +  +  + +  T+++L+S  G
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368

Query: 288 GERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
               L  GK I A     G   + V I NALI MY KCG +++AR IFD    K  V+W 
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MIAGY+ NG F +AL +F  M++    PN  T  ++L+A ++S SL++  + + HI+K 
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQ 487

Query: 407 GFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
            + +   +   SC++   G+   L E+  ++  +  K
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 20/242 (8%)

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           E+L L+R +     E N  TF  V KACA + D+   + +H   +K+ +  D+FV +A +
Sbjct: 35  ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DM+ KC +++ A + F ++       WNAM+ G+ Q G   +  +LF +M    + PD +
Sbjct: 95  DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGA 634
           T + ++ S             L  +  +H      G+  Q+      +   G+ G L+ A
Sbjct: 155 TVMTLIQSASF-------EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 207

Query: 635 KMTIDQMPIPPDAHI-WQSLLSACTIYGNI--DLGLLAGSKLLELQPDNESTYVLLSNLY 691
           K+  + +       + W S+  A +++G      GL       E +PD  ST++   NL 
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD-LSTFI---NLA 263

Query: 692 AS 693
           AS
Sbjct: 264 AS 265



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           +WN  I          ++L +F  M      PN +T   + +A +    +     VH+H+
Sbjct: 19  AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           IKS F  D  + +  +  + KCN+++ + +V   + +++A   NA+ S    +    +A 
Sbjct: 79  IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+R +  +    +  T   ++++ +    L+  +A+H + ++   D  + V +  I  Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198

Query: 524 CKCGTIEDAKRAFRKICR--DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
            KCG ++ AK  F  I R   ++  WN+M   Y+  G   +   L+  M +   KPD  T
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258

Query: 582 YLAVLTSCCHAGLVREAR 599
           ++ +  SC +   + + R
Sbjct: 259 FINLAASCQNPETLTQGR 276


>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
 gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
          Length = 732

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 185/701 (26%), Positives = 363/701 (51%), Gaps = 17/701 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ + ++G   D   +  LI+ + K      AF+     ++ +++++ ++I   A++ 
Sbjct: 39  KVHAYIRESGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYG 98

Query: 61  QSG-PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             G  ++ LF ++  +G+RP+  T  ++++AC +L +   VHG  L+ G S    L +  
Sbjct: 99  HLGRESVLLFRKMELEGIRPNLITMVAVLRAC-NLTDGRQVHGYVLEAGMSLDTSLGNAL 157

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ Y K+G++  A++  R+    D +++  M+ GY  +G+  +       M+  GL   +
Sbjct: 158 VDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTK 217

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +   +L A     D+ EG+ IH   V +G        + + ++ +Y +CG   D  +  
Sbjct: 218 VTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEV--VKSFLLGMYGKCGSLEDVKRSS 275

Query: 237 DEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            E+ E + ++W+  I A     D  +A   F+ ++    + +  T + +L +      L 
Sbjct: 276 CEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLA 335

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G  +  +  ++GF E + + N+L +MY KCG ++ AR +F+ +  ++SVSWNS+I+   
Sbjct: 336 QGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAI 394

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           ++G +  A   F  M      P+  T  S+L+A +   + K+   +H  +++SGF     
Sbjct: 395 QHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTG 454

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + LI  Y K      ++ V   + ++N V  N + +  V    + +A+E++   W   
Sbjct: 455 VANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMF---WKMD 511

Query: 474 REVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQ--DIFVESAVIDMYCKCGTIE 530
              +  T+   L AC+ +   L  GK IH   L   +    D    +A+++MY KCG+++
Sbjct: 512 VARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQ 571

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A++ F ++    +  W ++++ YAQH    +   L   M + GVK D++ +L++L+ C 
Sbjct: 572 EARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCD 631

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+GL+ E   Y   M D +G+ P+LEHY CI+D+LGR G L+ A+  +D++P   D+ +W
Sbjct: 632 HSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVW 691

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
            +LL+AC ++GN + G  A  ++  L P   + YV+LSN+Y
Sbjct: 692 MTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/615 (25%), Positives = 296/615 (48%), Gaps = 23/615 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL+L+ R++ +G+RPD+ TF + ++AC   G+L +   VH    + G  + +Y  +  I 
Sbjct: 2   ALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALIN 61

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK-SKEVFVEMRSLGLELNEF 180
            Y K      A   F      + V++T+++  +   G   + S  +F +M   G+  N  
Sbjct: 62  MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLI 121

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++ AVL A  ++ +G Q+HG+ ++ G    +   L NA++++Y + G   +A  +  E+ 
Sbjct: 122 TMVAVLRAC-NLTDGRQVHGYVLEAGM--SLDTSLGNALVDMYCKTGDVDEADLVLREMP 178

Query: 241 EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           + DV+SW+  I   A + D  E       ++ +     + T   LL++      L  GK 
Sbjct: 179 KRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKS 238

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I      +G      + + L+ MYGKCG + D +     +  +++++WN++I  Y+    
Sbjct: 239 IHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSD 298

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-- 415
             QAL  F  M    +  +  T   +L   S+   L Q + +H  I + GF   +S+I  
Sbjct: 299 HFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF---ESIIVH 355

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L   Y KC +L+ ++++   +  +N+V  N+L S  +   C+A+A + ++ +      
Sbjct: 356 NSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSR 415

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T   +L AC    + ++G +IH + +++ +D+   V +A+I MY K G  E A+  
Sbjct: 416 PDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNV 475

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGL 594
           F  +   +   WN ++  Y + G   +   +F KM    V  D++TY+A L +C   AG 
Sbjct: 476 FDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALDACSGLAGG 532

Query: 595 VREARTYLSCMSDLHGLIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           +   +     M D HG   +L+  A   +V++ G+ G L+ A+   D+M +  D   W S
Sbjct: 533 LAHGKLIHGYMLD-HGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEM-LHRDVVTWTS 590

Query: 653 LLSACTIYGNIDLGL 667
           L+ A   +  I+  L
Sbjct: 591 LIVAYAQHSEIEQAL 605



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 204/412 (49%), Gaps = 24/412 (5%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           +A  L+K ++    + +  T +  L +   E  L  G+++ A+  + G    +   NALI
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNG 377
           +MYGKC    DA  +F  +   + VSW S+I  +++ G   +   +    +E   I PN 
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM ++L A     +L    QVH +++++G  LD S+ + L+  Y K   ++E+  VL E
Sbjct: 121 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE---VNGSTFSIVLKACAAMTDL 494
           + K++ +  N + S    +    E L   R +W   ++       T++ +L AC++  DL
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGL---RCLWRMQQDGLSPTKVTYATLLNACSSGEDL 233

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
            +GK+IH   +    D+D  V+S ++ MY KCG++ED KR+  ++   +   WN ++  Y
Sbjct: 234 GEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAY 293

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A++  + +    F +M   GVK D +T++ +L +C        +  +L+    LH  I Q
Sbjct: 294 ARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTC-------SSPAHLAQGILLHDWISQ 346

Query: 615 LEHYACIVD-----LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           L   + IV      +  + G L+ A+   + MP   ++  W SL+SA   +G
Sbjct: 347 LGFESIIVHNSLTAMYAKCGSLDAARKMFEGMP-SRNSVSWNSLISAAIQHG 397



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 169/386 (43%), Gaps = 40/386 (10%)

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           QAL+++  M    + P+  T  + L A +   +L    +VH++I +SG   D    + LI
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVH-INALASVLVYASCHAEALELYRTIWGSCREVNG 478
             YGKC +  ++ ++ S ++  N V   + + +   Y     E++ L+R +       N 
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   VL+AC    +L  G+ +H   L+A    D  + +A++DMYCK G +++A    R+
Sbjct: 121 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           + +  +  WN M+ GYAQ G   E      +M + G+ P ++TY  +L +C     + E 
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEG 236

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT--------------------- 637
           ++    + D+ GL       + ++ + G+ G LE  K +                     
Sbjct: 237 KSIHRSVVDM-GLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYAR 295

Query: 638 ----------IDQMP---IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
                       QM    +  DA  +  +L  C+   ++  G+L    + +L  ++   +
Sbjct: 296 YSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESIIVH 355

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEK 710
             L+ +YA  G  +   K+ + M  +
Sbjct: 356 NSLTAMYAKCGSLDAARKMFEGMPSR 381


>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
 gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
          Length = 616

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 175/536 (32%), Positives = 286/536 (53%), Gaps = 8/536 (1%)

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           ++  G++IH   VK G+   V  ++ N ++ +Y +CG   DA K+FD +   D +SWS+ 
Sbjct: 82  ELAAGKKIHEHVVKNGYYENV--YVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKM 139

Query: 251 IAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           IA         EA  L+K +  +        ++N  SS+G  R L  GK+I A   ++  
Sbjct: 140 IAGYVRHGLAREAIKLYKAMAIDPDGFTFSAVLNACSSLG-PRALEVGKEIHAHMKRIWL 198

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              V + +AL++M+ KCG + ++R +FD   +KD + WNSMI  YS++G   +A+++F  
Sbjct: 199 KPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKS 258

Query: 368 MLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
           M   S  + PN  T  ++L A S  + L+Q  +VH  ++ +GF  D +  + L+  Y KC
Sbjct: 259 MGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKC 318

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
            ++ E++ V   + ++  V    + S  V      EAL+LYR +     E NG TF+ VL
Sbjct: 319 GSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVL 378

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            AC+++  LE+GKA+H     A Y  D+ V +A++ +Y KCG+++ A++ F ++   ++ 
Sbjct: 379 SACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVV 438

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W AM+  YA H    E   L+  M   GV+     Y  VLT+C  AGL+  AR Y  C+
Sbjct: 439 SWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCL 498

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +   G   +LE Y C+  +LGR G L  A+  +  MP   +   W  LL+AC  + +++ 
Sbjct: 499 TRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAHNDVER 558

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           G      L  L+P NE+ YVLLSN+Y +AG   +  ++R++M +       G S I
Sbjct: 559 GARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKMGDVIAAAGSGESII 614



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 218/428 (50%), Gaps = 15/428 (3%)

Query: 81  AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           A  + +L++ CG L   + +H   +K G+   VY+ +  ++ Y+K G +  A+  F    
Sbjct: 70  APAYGNLLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMR 129

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEG 195
             D+++++ M+ GYV +G    ++E     +++ ++ + F+ +AVL A        ++ G
Sbjct: 130 RRDSISWSKMIAGYVRHG---LAREAIKLYKAMAIDPDGFTFSAVLNACSSLGPRALEVG 186

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
           ++IH    ++     V   +++A++ ++ +CG   ++ ++FD+    DV+ W+  I A  
Sbjct: 187 KEIHAHMKRIWLKPDV--FVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYS 244

Query: 256 DG---VEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                 EA  LFK +  +   +  N  T   +L++      L  GK++       GF   
Sbjct: 245 QSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFD 304

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
            +  N+L++MY KCG + +AR +FD +  +  VSW  +I+ Y   G   +ALD++  M  
Sbjct: 305 AAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGS 364

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PNG T AS+L A S+  +L++   VH+ +  +G+  D ++ + L++ YGKC +++ 
Sbjct: 365 EGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDS 424

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +++V   +  +N V   A+ S   +     EA++LY+ +     + +   +  VL AC+ 
Sbjct: 425 ARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQ 484

Query: 491 MTDLEQGK 498
              LE  +
Sbjct: 485 AGLLESAR 492



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 225/452 (49%), Gaps = 23/452 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  ++KNG++ +  +   L+  ++K      A +     + RD I+++ +I+G  R  
Sbjct: 88  KIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHG 147

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
            +  A+KL+  +    + PD FTFS+++ AC SL    +     +H    ++     V++
Sbjct: 148 LAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLKPDVFV 204

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSL 173
            S  +  +AK G +  +   F DC   D + + +M+  Y  +G   ++ E+F  M   S 
Sbjct: 205 DSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSP 264

Query: 174 GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +E N  + T VL A     D+++G+++H   V  GF         N+++N+Y +CG   
Sbjct: 265 PVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAA--AENSLVNMYAKCGSIT 322

Query: 231 DAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A ++FD + +  VVSW+  I+A        EA  L++ +     + N  T  ++LS+  
Sbjct: 323 EAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACS 382

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  GK + A     G+   +++ NAL+S+YGKCG V+ AR +FD +  ++ VSW +
Sbjct: 383 SLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTA 442

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-- 405
           MI+ Y+ +    +A+ ++  M    +  + +   ++L A S +  L+ A      + +  
Sbjct: 443 MISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCLTRDC 502

Query: 406 -SGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            +   L+D +  C+ T  G+   L E++ +L+
Sbjct: 503 GAPAKLEDYV--CMATVLGRAGRLAEAEELLA 532



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 162/350 (46%), Gaps = 15/350 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL- 72
           D  + + L++ F K    + +     D + +D++ +N++I   ++      A++LF  + 
Sbjct: 201 DVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMG 260

Query: 73  -RYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
                + P+A T+++++ AC +   L++ + VH   +  GF       +  +  YAK G 
Sbjct: 261 SSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGS 320

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           I  A   F        V++T ++  YV  G   ++ +++ +M S G+E N  +  +VL A
Sbjct: 321 ITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSA 380

Query: 189 SFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
                 ++EG+ +H      G+   +   + NA+++LY +CG    A K+FD +   +VV
Sbjct: 381 CSSLGALEEGKAVHAQMKAAGYKPDLA--VANALVSLYGKCGSVDSARKVFDRMKIRNVV 438

Query: 246 SWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAF 301
           SW+  I+A        EA  L+K +     Q + +    +L++     +L + +      
Sbjct: 439 SWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCL 498

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
               G    +     + ++ G+ G++ +A  +   + F+ + V+W  ++A
Sbjct: 499 TRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLA 548


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 290/553 (52%), Gaps = 37/553 (6%)

Query: 232 AVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           AV +F+   EP+++ W+     +A++ D V    ++  +       N YT   LL S   
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +    G+QI A   K+G         +LISMY + G++ DAR +FD             
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  +D VSWN+MI GY EN  + +AL++F  M+  ++ P+ 
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLS 436
            T+ S+L A + S S++   ++H+ +    GF     +++  I  Y KC  +  +  +  
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  K+ V  N L     + + + EAL L++ +  S    N  T   VL ACA +  ++ 
Sbjct: 276 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 335

Query: 497 GKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           G+ IH    K          + +++IDMY KCG IE A + F  +   SL+ WNAM+ G+
Sbjct: 336 GRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGF 395

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG  +   +LF++M K G++PD+IT + +L++C H+GL+   R     ++  + + P+
Sbjct: 396 AMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPK 455

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I  MP+ PD  IW SLL AC ++GN++L      KL+
Sbjct: 456 LEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLM 515

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           E++P+N  +YVLLSN+YA+AG W DV ++R+ +  K + K PG S I +    H F  GD
Sbjct: 516 EIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGD 575

Query: 735 SSHSQSKEIYKEL 747
             H QS+EIY+ L
Sbjct: 576 KLHPQSREIYRML 588



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 214/512 (41%), Gaps = 85/512 (16%)

Query: 3   YSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           ++ ++K G H     L  +L   ++S    F     A       Q  +++ +N ++ GLA
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVS--PHFDGLPYAVSVFETXQEPNLLIWNTMLRGLA 59

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
                   L+++ R+   G  P+A+TF  L+K+C    + +E   +H   +KLG      
Sbjct: 60  SSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLG------ 113

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
                                     +LD  A+T+++  Y  NG  + +++VF       
Sbjct: 114 -------------------------CELDRYAHTSLISMYARNGRLEDARKVF----DXS 144

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
            + +  S TA++                                    Y   G    A K
Sbjct: 145 SQRDVVSCTALITG----------------------------------YASRGDVRSARK 170

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD ITE DVVSW+  I      C   EA  LFK++   + + +E T++++LS+      
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230

Query: 292 LRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +  G++I        GF   + I NA I +Y KCG V  A  +F+ L  KD VSWN++I 
Sbjct: 231 IELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIG 290

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK--SGF 408
           GY+    + +AL +F  ML     PN  TM S+L A ++  ++     +H +I K   G 
Sbjct: 291 GYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 350

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
               ++ + LI  Y KC  +  + +V + +  K+    NA+            A +L+  
Sbjct: 351 TNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSR 410

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +  +  E +  T   +L AC+    L+ G+ I
Sbjct: 411 MRKNGIEPDDITLVGLLSACSHSGLLDLGRHI 442



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 183/412 (44%), Gaps = 34/412 (8%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +  T LI+ +    D R A +       RD++++NA+I+G    C    AL+LF  + 
Sbjct: 148 DVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMM 207

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHG-VCLKLGFSSRVYLVSGFIENYAKSGEI 129
              +RPD  T  S++ AC   GS++    +H  V    GF S + +V+ FI  Y+K G++
Sbjct: 208 RTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA- 188
             A   F      D V++  ++ GY     + ++  +F EM   G   N+ ++ +VL A 
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327

Query: 189 ----SFDVKEGEQIHGFGVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
               + D+  G  IH +  K   L GV N   L  +++++Y +CG    A ++F+ +   
Sbjct: 328 AHLGAIDI--GRWIHVYIDK--RLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHK 383

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI- 298
            + SW+  I   A       AF LF  +R N  + ++ T++ LLS+     +L  G+ I 
Sbjct: 384 SLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIF 443

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENGF 357
           ++          +     +I + G  G   +A  I   +  + D V W S++     +G 
Sbjct: 444 KSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGN 503

Query: 358 FNQALDMFCHMLE--------FSLIPNGYTMASILEAVS------NSKSLKQ 395
              A      ++E        + L+ N Y  A   E V+      N K +K+
Sbjct: 504 LELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKK 555



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 39/296 (13%)

Query: 399 VHSHIIKSG-----FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            H+ ++K+G     + L   +  C+++ +   + L  +  V     + N +  N +   L
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPH--FDGLPYAVSVFETXQEPNLLIWNTMLRGL 58

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +S     LE+Y  +       N  TF  +LK+CA     E+G+ IH   +K   + D 
Sbjct: 59  ASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDR 118

Query: 514 FVESAVIDMYCKCGTIEDAKRAF---------------------------RK----ICRD 542
           +  +++I MY + G +EDA++ F                           RK    I   
Sbjct: 119 YAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITER 178

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +  WNAM+ GY ++  Y E   LF +M +  V+PDE T ++VL++C  +G +   R   
Sbjct: 179 DVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH 238

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           + + D HG    L+     + L  + G +E A    + +    D   W +L+   T
Sbjct: 239 TLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC-KDVVSWNTLIGGYT 293


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 201/669 (30%), Positives = 336/669 (50%), Gaps = 28/669 (4%)

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-------------GSLQENEIVHGVCL 105
           F  +  AL +F +L      P+  TFS L+KAC               LQ N+I   + L
Sbjct: 12  FHDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQL-L 70

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K G    +Y+ +  I+ Y K G    A   F D    D V++  ++CGY  +G    + +
Sbjct: 71  KRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQ 130

Query: 166 VFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +FV M       N+ ++ ++L   G      +G  +H FG+K G   G+   L+NA+ ++
Sbjct: 131 LFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGL--GLDPQLSNALTSM 188

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTM 279
           Y +C     +  +F E+ E +V+SW+  I A   +G E  A   FK++    +Q +  TM
Sbjct: 189 YAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTM 248

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           +NL+S+          + +  +  K GF    S+  +L+ +Y K G  + A+ +++    
Sbjct: 249 MNLMSANA------VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPT 302

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD +S   +I+ YSE G    A++ F   L+  + P+   + S+L  +S+          
Sbjct: 303 KDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAF 362

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H + +K+G   D  + + LI+ Y + + +  +  +  +  +K  +  N++ S  V A   
Sbjct: 363 HGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKS 422

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           ++A+EL+  +    ++ +  T + +L  C  +  L  G+ +H   L+     + F  +A+
Sbjct: 423 SDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTAL 482

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           IDMY KCG ++ A++ F  I    L  WN+++ GY+ +G  H+    F+K+ + G++PD+
Sbjct: 483 IDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDK 542

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           IT+L VL +C H GLV     Y   M   +GL+P L+HYACIV LLGR GL + A   I+
Sbjct: 543 ITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIIN 602

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            M I PD+ +W +LLSAC I   + LG      L  L   N   YV LSNLYA  G W+D
Sbjct: 603 NMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDD 662

Query: 700 VGKLRKEMK 708
           V ++R  M+
Sbjct: 663 VARVRDMMR 671



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 225/498 (45%), Gaps = 17/498 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI + L+K G      ++T LI  + K      A +   D  + D++++N LI G ++  
Sbjct: 64  QIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHG 123

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL+LF  +  +  RP+  T +SL+ +CG  +   +   VH   +K G      L +
Sbjct: 124 HPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSN 183

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                YAK  ++ ++++ F++  + + +++  M+  Y  NG  DK+   F EM   G + 
Sbjct: 184 ALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQP 243

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++  ++ A+      E +H + +K GF       +  +++ LY + G    A  +++
Sbjct: 244 SPVTMMNLMSAN---AVPETVHCYIIKCGFTGDA--SVVTSLVCLYAKQGFTDMAKLLYE 298

Query: 238 EITEPDVVSWSERIAAACD------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
                D++S +  I++  +       VE F   + L+  D + +   +I++L  +     
Sbjct: 299 CYPTKDLISLTGIISSYSEKGEVESAVECF--IQTLKL-DIKPDAVALISVLHGISDPSH 355

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
              G     +  K G      + N LIS Y +  ++  A S+F     K  ++WNSMI+G
Sbjct: 356 FAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISG 415

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             + G  + A+++FC M      P+  T+AS+L        L+    +H +I+++   ++
Sbjct: 416 CVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVE 475

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           D   + LI  Y KC  L+ ++++   I+    V  N++ S         +A   +  +  
Sbjct: 476 DFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQE 535

Query: 472 SCREVNGSTFSIVLKACA 489
              E +  TF  VL AC 
Sbjct: 536 QGLEPDKITFLGVLAACT 553



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +KNG   D +++  LIS +++F +   A    FD   + +IT+N++ISG  +  +S  A+
Sbjct: 367 LKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAM 426

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +LF ++   G +PDA T +SL+  C   G L+  E +HG  L+       +  +  I+ Y
Sbjct: 427 ELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMY 486

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K G +  AE  F    D   V + +++ GY   G   K+   F +++  GLE ++ +  
Sbjct: 487 TKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFL 546

Query: 184 AVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI- 239
            VL A      V  G +      K   L     H    I+ L  R G   +A+++ + + 
Sbjct: 547 GVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHY-ACIVGLLGRAGLFKEAIEIINNME 605

Query: 240 TEPDVVSWSERIAA 253
             PD   W   ++A
Sbjct: 606 IRPDSAVWGALLSA 619


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 203/715 (28%), Positives = 362/715 (50%), Gaps = 16/715 (2%)

Query: 18  STTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           ST LI  + +    + +   +F+T QN D   +  LI           A+ L+D++    
Sbjct: 36  STKLIESYAQMGSIKSS-TLVFETYQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNE 94

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            +  +F F S+++AC    +  I   VHG  +K GF +  ++ +  +  Y + G +  A 
Sbjct: 95  AQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDAR 154

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV- 192
             F D    D V++++++  YV  GE +++ E+F  + +  ++L+   + +V  A   + 
Sbjct: 155 KVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLG 214

Query: 193 --KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
             K  + IHG+ V+       C  L+N+++ +Y  C     A ++F  +     +SW+  
Sbjct: 215 ILKLAKSIHGYIVRRRV--DTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSM 272

Query: 251 IAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I          EAF +F  +     + N  T++ +L S  G   LR GK I  +  K G 
Sbjct: 273 IYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGM 332

Query: 308 -MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
             +   +G  LI +Y  CG++     +   +  ++ VSWN++++  +  G F +AL +F 
Sbjct: 333 TFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFV 392

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M +  L+ + ++++S + A  N  SL+   Q+H + IK   +L + + + LI  Y +C 
Sbjct: 393 QMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRC-ILGEFVKNALIGMYSRCG 451

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
             + +  + ++I +K++V  N++ S  V +    EA+ L   ++ +C ++    F   ++
Sbjct: 452 FSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQ 511

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACA M  LE+GK +H   +    ++D+++E+A+ DMY KCG +  A+  F  +   S+  
Sbjct: 512 ACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVS 571

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W+AM+ GY  HG        FN+M + G+KP+ IT++ +L++C H+G V + + Y   M 
Sbjct: 572 WSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMR 631

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           D  G+ P  EH+AC+VDLL R G + GA   I+ MP P DA +  +LL+ C I+  +D+ 
Sbjct: 632 DF-GVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRMDMI 690

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
                 LL+++  +   Y LLSN+YA  G W      R  M+     K PGYS I
Sbjct: 691 PEIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYSAI 745



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 156/614 (25%), Positives = 295/614 (48%), Gaps = 14/614 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           +  L ++C +L++   +H        S+     +  IE+YA+ G I S+ + F    + D
Sbjct: 4   YMPLFRSCKTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPD 63

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHG 200
           +  +  ++  +VW+  F+++  ++ +M     ++  F   +VL A     D+  G ++HG
Sbjct: 64  SFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHG 123

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---G 257
             +K GF +     +  +++ LY   G   DA K+FD+I   D+VSWS  I++  D    
Sbjct: 124 RIIKCGFDND--PFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEA 181

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            EA  +F+ L     +++   M+++  +     IL+  K I  +  +       ++ N+L
Sbjct: 182 NEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSL 241

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I MY  C  +  A  IF  +  K  +SW SMI  Y+ +G+F +A ++F  MLE  + PN 
Sbjct: 242 IEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNV 301

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL-DDSMISCLITTYGKCNALNESKRVLS 436
            T+  +L++ S    L++   +H + +K G    DD +   LI  Y  C  L   ++VL 
Sbjct: 302 ITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLL 361

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            I ++N V  N L S+        EAL L+  +      ++  + S  + AC  +  L+ 
Sbjct: 362 AIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQL 421

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G+ IH  A+K R     FV++A+I MY +CG  + A   F  I + S   WN+++ G+ Q
Sbjct: 422 GRQIHGYAIK-RCILGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQ 480

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
            G   E  +L ++M    +K  ++ +L+ + +C     + + + +L     ++G+   L 
Sbjct: 481 SGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGK-WLHHKLIMYGVEKDLY 539

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
               + D+  + G L  A+     M        W +++S   ++G ID  +   ++++EL
Sbjct: 540 IETALTDMYAKCGDLRTAEGVFHSMS-EKSVVSWSAMISGYGMHGRIDAAITFFNQMVEL 598

Query: 677 --QPDNESTYVLLS 688
             +P++ +   +LS
Sbjct: 599 GIKPNHITFMNILS 612



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 252/508 (49%), Gaps = 13/508 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  +IK G   DP + T+L+  + +      A +   D   RD+++++++IS      
Sbjct: 120 KVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKG 179

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  AL++F  L  + ++ D     S+ +AC   G L+  + +HG  ++    +   L +
Sbjct: 180 EANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDN 239

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             IE Y+   ++ SAE  F +  +   +++T+M+  Y  +G F ++ E+FV+M  L +E 
Sbjct: 240 SLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEP 299

Query: 178 NEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           N  ++  VL    G S+ ++EG+ IH + +K G ++   + L   ++ LY  CG+     
Sbjct: 300 NVITIMGVLKSCSGLSW-LREGKLIHCYALKKG-MTFQDDCLGPVLIELYAGCGKLGYCE 357

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+   I E +VVSW+  ++  A  G+  EA  LF  ++     ++ +++ + +S+ G   
Sbjct: 358 KVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVG 417

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L+ G+QI  +  K   +    + NALI MY +CG  + A  IF+ +  K SV+WNS+I+
Sbjct: 418 SLQLGRQIHGYAIKRCILGEF-VKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIIS 476

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G+ ++G   +A+ +   M    L        S ++A ++   L++   +H  +I  G   
Sbjct: 477 GFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEK 536

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + + L   Y KC  L  ++ V   + +K+ V  +A+ S          A+  +  + 
Sbjct: 537 DLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMV 596

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGK 498
               + N  TF  +L AC+    +EQGK
Sbjct: 597 ELGIKPNHITFMNILSACSHSGSVEQGK 624



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 14/419 (3%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           + LR   Q+ A                LI  Y + G +  +  +F+     DS  W  +I
Sbjct: 12  KTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLI 71

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
             +  +  F +A+ ++  ML        +   S+L A +    +    +VH  IIK GF 
Sbjct: 72  KCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFD 131

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + L+  YG+   L ++++V  +I  ++ V  +++ S  V      EALE++R +
Sbjct: 132 NDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLL 191

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                +++      V +AC+ +  L+  K+IH   ++ R D    +++++I+MY  C  +
Sbjct: 192 VNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDL 251

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A+R F  +   +   W +M+  Y + G + E   +F KM +  V+P+ IT + VL SC
Sbjct: 252 YSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSC 311

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL----GRVGLLEGAKMTIDQMPIPP 645
                +RE +  + C +   G+  Q +    ++  L    G++G  E   + I +  +  
Sbjct: 312 SGLSWLREGKL-IHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVS 370

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
               W +LLS      N   GL   + +L +Q       +   +L ++     +VG L+
Sbjct: 371 ----WNTLLSI-----NARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQ 420



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 7/241 (2%)

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           M   +    + K+L+Q  Q+H+H+  +         + LI +Y +  ++  S  V     
Sbjct: 1   MTRYMPLFRSCKTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQ 60

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
             ++     L    V++    EA+ LY  +  +  ++    F  VL+ACA   D+  G  
Sbjct: 61  NPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAK 120

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H   +K  +D D F+E++++ +Y + G + DA++ F  I    L  W++++  Y   G 
Sbjct: 121 VHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGE 180

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
            +E   +F  +    VK D +  L+V  +C   G+++ A++       +HG I +     
Sbjct: 181 ANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKS-------IHGYIVRRRVDT 233

Query: 620 C 620
           C
Sbjct: 234 C 234



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/130 (20%), Positives = 60/130 (46%), Gaps = 3/130 (2%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           LI  G   D  + T L   + K  D R A         + +++++A+ISG     +   A
Sbjct: 529 LIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAA 588

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           +  F+++   G++P+  TF +++ AC   GS+++ +    +    G        +  ++ 
Sbjct: 589 ITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFACLVDL 648

Query: 123 YAKSGEIVSA 132
            +++G++  A
Sbjct: 649 LSRAGDVNGA 658


>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
 gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 170/542 (31%), Positives = 289/542 (53%), Gaps = 4/542 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N++++LY +CG+ +DA+K+FDE+   DV+S +          E    F L K +      
Sbjct: 94  NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-LGSGG 152

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T+  +LS           K I A     G+ + +S+GN LI+ Y KCG     R +
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  ++ ++  ++I+G  EN      L +F  M    + PN  T  S L A S S+ +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            +  Q+H+ + K G   +  + S L+  Y KC ++ ++  +     + + V +  +   L
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  EA++ +  +  +  E++ +  S VL        L  GK +H L +K ++  + 
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           FV + +I+MY KCG + D++  FR++ + +   WN+M+  +A+HG       L+ +M+  
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            VKP ++T+L++L +C H GL+ + R  L+ M ++HG+ P+ EHY CI+D+LGR GLL+ 
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           AK  ID +P+ PD  IWQ+LL AC+ +G+ ++G  A  +L +  PD+ S ++L++N+Y+S
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
            G W +  K  K MK   + KE G S I +   TH F   D  H Q++ IY  L  L+  
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632

Query: 754 MV 755
           MV
Sbjct: 633 MV 634



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 182/367 (49%), Gaps = 15/367 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I++L I +G+  +  +   LI+ + K      + R +FD   +R++IT  A+ISGL    
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFK-CGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
                L+LF  +R   + P++ T+ S + AC   Q   E + +H +  K G  S + + S
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIES 295

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G I  A   F    ++D V+ T ++ G   NG  +++ + F+ M   G+E+
Sbjct: 296 ALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   ++AVLG SF    +  G+Q+H   +K  F       +NN ++N+Y +CG   D+  
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN--TFVNNGLINMYSKCGDLTDSQT 413

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + + VSW+  IAA      G+ A  L++++   + +  + T ++LL +     +
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473

Query: 292 LRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G+++     +V G          +I M G+ G + +A+S  D L  K D   W +++
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533

Query: 350 AGYSENG 356
              S +G
Sbjct: 534 GACSFHG 540



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 18/405 (4%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + N+L+S+Y KCG++ DA  +FD +  +D +S N +  G+  N        +   ML   
Sbjct: 92  VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
              +  T+  +L      +       +H+  I SG+  + S+ + LIT+Y KC      +
Sbjct: 152 GFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            V   +  +N + + A+ S L+    H + L L+  +       N  T+   L AC+   
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            + +G+ IH L  K   + ++ +ESA++DMY KCG+IEDA   F             +++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G AQ+G   E    F +M + GV+ D     AVL        V      L     LH L+
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG-------VSFIDNSLGLGKQLHSLV 383

Query: 613 PQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN--ID 664
            + +          ++++  + G L  ++    +MP   +   W S+++A   +G+    
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAA 442

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           L L      LE++P  + T++ L +  +  G+ +   +L  EMKE
Sbjct: 443 LKLYEEMTTLEVKP-TDVTFLSLLHACSHVGLIDKGRELLNEMKE 486



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL+IK     +  ++  LI+ ++K  D   +         R+ +++N++I+  AR  
Sbjct: 378 QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----------LQENEIVHGV 103
               ALKL++ +    ++P   TF SL+ AC            L E + VHG+
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 188/578 (32%), Positives = 301/578 (52%), Gaps = 43/578 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGL-FKDLRF 269
           N +++ Y + G   D  ++FD +   DVVSW+  ++         + V  + +  KD   
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           N  +I   TM+ L S+ G    +  G+QI    +K G+   + +G+ L+ MY K G +ND
Sbjct: 135 NLNRITFSTMLILSSNRG---FVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIND 191

Query: 330 ARSIF-------------------------------DYLIFKDSVSWNSMIAGYSENGFF 358
           A  IF                               D +  KDS+SW ++I G ++NG F
Sbjct: 192 ANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLF 251

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +A+D F  M       + +T  S+L A     +L +  Q+H++II++ +  +  + S L
Sbjct: 252 KEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSAL 311

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC  +  ++ V  ++  KN +   A+           EA+ ++  +  +    + 
Sbjct: 312 LDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDD 371

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T   V+ +CA +  LE+G   H  AL +     + V +A+I +Y KCG++E A + F +
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHE 431

Query: 539 I-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +  RD ++ W A++ GYAQ G  +E  +LF  M   G+ PD +T++ VL++C  AGLV +
Sbjct: 432 MKIRDEVS-WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEK 490

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y  CM   H + P  +HY C++DLL R G LE AK  I+QMP  PDA  W +LLS+C
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSC 550

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            + GN+++G  A   L +L+P N ++Y+LLS++YA+ G W+DV KLRK M+E  + KEPG
Sbjct: 551 RLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPG 610

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           +SWI      H F A D S   S +IY +L  LY  M+
Sbjct: 611 HSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMI 648



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 222/462 (48%), Gaps = 44/462 (9%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG-L 77
            TL+S ++K    +   R      N D++++N+L+SG A       ++++++ +   G +
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134

Query: 78  RPDAFTFSSLV---KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG------- 127
             +  TFS+++      G +     +HG   K G+ S +++ S  ++ YAK+G       
Sbjct: 135 NLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANR 194

Query: 128 ------------------------EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                                    IV AE  F +  + D++++T ++ G   NG F ++
Sbjct: 195 IFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEA 254

Query: 164 KEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            + F EM   G  +++F+  +VL   G    + EG+QIH + ++  +   +   + +A++
Sbjct: 255 VDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI--FVGSALL 312

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEY 277
           ++Y +C     A  +F ++   +V+SW+  +          EA  +F D++ N+   +++
Sbjct: 313 DMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDF 372

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T+ +++SS      L  G Q        G +  V++ NALI++YGKCG +  A  +F  +
Sbjct: 373 TLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEM 432

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D VSW ++++GY++ G  N+ + +F  ML   ++P+G T   +L A S +  +++  
Sbjct: 433 KIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGY 492

Query: 398 QVHSHIIKSGFLLD-DSMISCLITTYGKCNALNESKRVLSEI 438
                ++K   +       +C+I    +   L E+K  ++++
Sbjct: 493 HYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQM 534



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 195/435 (44%), Gaps = 76/435 (17%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           RI+R     + F Y           N LI+ YGK G + +AR++FD++   +  SWN+++
Sbjct: 30  RIIRTLTNPETFLY-----------NNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLL 78

Query: 350 AGYSE-------------------------------NGFFNQALDMFCHML-EFSLIPNG 377
           + YS+                               NG  ++++ ++  ML + S+  N 
Sbjct: 79  SAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNR 138

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T +++L   SN   +    Q+H  I K G+     + S L+  Y K   +N++ R+  E
Sbjct: 139 ITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEE 198

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTI-------W----------GSCRE----- 475
           I +KN V  N + + L+      EA +L+  +       W          G  +E     
Sbjct: 199 IPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKF 258

Query: 476 ---------VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
                    ++  TF  VL AC     L++GK IH   ++  Y  +IFV SA++DMYCKC
Sbjct: 259 KEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC 318

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
             ++ A+  FRK+   ++  W AM++GY Q+G   E   +F  M +  + PD+ T  +V+
Sbjct: 319 RNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVI 378

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           +SC +   + E   +    +   GLI  +     ++ L G+ G LE A     +M I  D
Sbjct: 379 SSCANLASLEEGAQFHG-QALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI-RD 436

Query: 647 AHIWQSLLSACTIYG 661
              W +L+S    +G
Sbjct: 437 EVSWTALVSGYAQFG 451



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 182/403 (45%), Gaps = 54/403 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  + K G+     + + L+  + K      A R   +   ++I+ YN +I+GL R  
Sbjct: 159 QIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCR 218

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                       Q+G    A+  F  +  +G   D FTF S++ 
Sbjct: 219 FIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLT 278

Query: 90  ACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           ACG   +L E + +H   ++  +   +++ S  ++ Y K   +  AE  FR     + ++
Sbjct: 279 ACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVIS 338

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +TAM+ GY  NG  +++  +F +M+   +  ++F+L +V+ +  +   ++EG Q HG  +
Sbjct: 339 WTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQAL 398

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEA 260
             G +  V   ++NA++ LY +CG    A ++F E+   D VSW+  ++         E 
Sbjct: 399 ASGLICFVT--VSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANET 456

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY---KVGFMEVVSIGN-- 315
             LF+ +  +    +  T + +LS+       RAG   + + Y    V    +  I +  
Sbjct: 457 ISLFETMLAHGIVPDGVTFVGVLSACS-----RAGLVEKGYHYFECMVKEHRITPIPDHY 511

Query: 316 -ALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENG 356
             +I +  + G++ +A++  + + F  D++ W ++++    NG
Sbjct: 512 TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNG 554



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 45/235 (19%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++  LK C    +  Q K +HC  ++   + + F+ + +I+ Y K G +++A+  F  I 
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA-R 599
           + +L  WN ++  Y++ G   ++  +F+ M       D +++ ++L+     GL+ E+ R
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNH----DVVSWNSLLSGYAGNGLISESVR 123

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            Y   + D                  G V L    ++T   M I          LS+   
Sbjct: 124 VYNMMLKD------------------GSVNL---NRITFSTMLI----------LSSNR- 151

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVL----LSNLYASAGMWNDVGKLRKEMKEK 710
            G +DLG     ++ +       +Y+     L ++YA  G  ND  ++ +E+ EK
Sbjct: 152 -GFVDLGRQIHGQIFKF---GYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEK 202


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 227/788 (28%), Positives = 387/788 (49%), Gaps = 51/788 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K G   + +L   L+  ++K      A       ++R I T+N LI+      
Sbjct: 45  QLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA----- 99

Query: 61  QSGPA--LKLFDRLRYQGL---RPDAFTFSSLVKACGS-------------LQENEIVHG 102
           QS PA    L+ R++ +     RP+  T  +++ A  S             + +  IVH 
Sbjct: 100 QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHD 159

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-D 161
                     +++ +  ++ Y K G + SA   F      D + + A +     N E  D
Sbjct: 160 DIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPD 219

Query: 162 KSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           ++  +   M   GL  N  S  A+L +  D   +     IH    ++GFL  V   +  A
Sbjct: 220 RALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV--VATA 277

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQIN 275
           ++ +Y RCG   +++ +F+ +   + VSW+  IAA         AF ++  ++   F+ N
Sbjct: 278 LVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPN 337

Query: 276 EYTMINLLSSV--GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           + T +  L +      + L     +  +    G    V +G AL++MYG  G ++ AR+ 
Sbjct: 338 KITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAA 397

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL---EAVSNS 390
           FD +  K+ VSWN+M+  Y +NG   +A+++F  M   SL PN  +  ++L   E VS +
Sbjct: 398 FDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEA 457

Query: 391 KSLKQAMQVHSHIIKSG-FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           +S      +H+ ++ +G F  + S+ + ++  + +  +L E+         K++V  N  
Sbjct: 458 RS------IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTK 511

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC-LALKAR 508
            + L        A+  + T+       +  T   V+  CA +  LE G++I   L+    
Sbjct: 512 VAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIE 571

Query: 509 YDQDIFVESAVIDMYCKCGT-IEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSN 565
            ++D+ V SAV++M  KCG+ +++ +R F ++   R  L  WN M+  YAQHG   +   
Sbjct: 572 VERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALK 631

Query: 566 LFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ-LEHYACIVD 623
           LF  M  +  V+PD  T+++VL+ C HAGLV +         ++ G+  Q +EHYAC+VD
Sbjct: 632 LFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVD 691

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           +LGR+G L  A+  I +MP+P D+ +W SLL AC+ YG+++ G  A    +EL   +   
Sbjct: 692 VLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVG 751

Query: 684 YVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE-PGYSWIHVGGYTHHFYAGDSSHSQSKE 742
           YV+LSN+YA+AG W D  ++R++M E+ + K  PG S I V    H F+A D SH QS  
Sbjct: 752 YVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDA 811

Query: 743 IYKELIKL 750
           IY EL +L
Sbjct: 812 IYAELERL 819



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 198/446 (44%), Gaps = 33/446 (7%)

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           +  + +D  I   T+  LL    G+  L  G+Q+     K G      +GN L+ MY KC
Sbjct: 13  RSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKC 72

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSL--IPNGYTMA 381
             ++DA + F  L  +   +WN++IA  S         D++  M LE      PN  T+ 
Sbjct: 73  RSLDDANAAFSALRSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNKLTII 129

Query: 382 SILEAVSN----------SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           ++L A+++          + S+ QA  VH  I  S    D  + + L+  YGKC  +  +
Sbjct: 130 AVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESA 189

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHA---EALELYRTIWGSCREVNGSTFSIVLKAC 488
             V S I   + +  N  A+++  A        AL L R +W      N ++F  +L +C
Sbjct: 190 LEVFSRIQVPDLICWN--AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSC 247

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
              + L   ++IH    +  +  D+ V +A++ MY +CG+++++   F  +   +   WN
Sbjct: 248 GDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWN 307

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA-----GLVREARTYLS 603
           AM+  +AQ G       ++ +M + G +P++IT++  L + C +     G       +++
Sbjct: 308 AMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIA 367

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
           C     GL   +     +V + G  G ++ A+   D +P   +   W ++L+A    G  
Sbjct: 368 CA----GLEGDVMVGTALVTMYGSTGAIDRARAAFDAIP-AKNIVSWNAMLTAYGDNGRA 422

Query: 664 D--LGLLAGSKLLELQPDNESTYVLL 687
              + L A  K   L P+  S   +L
Sbjct: 423 REAMELFAAMKRQSLAPNKVSYLAVL 448


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 206/736 (27%), Positives = 382/736 (51%), Gaps = 28/736 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q+Y    K+G   D  + +T++    K      A R   D + R  ++ +N  ISG  R 
Sbjct: 93  QLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRN 152

Query: 60  CQSGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
            +    +++F D +R     P++FT+S ++ AC + +E      VHG+ L+      V++
Sbjct: 153 GEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFV 212

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y K G++ +A   F      + V++T  + G+V   +   +  +  EM   G+
Sbjct: 213 GTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGV 272

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD 231
            +N+++ T++L A      ++E  Q+HG  +K   +L  V   +  A+++ Y   G    
Sbjct: 273 AINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHV---VKEALISTYANAGAVQL 329

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV------EAFGLFKDLRFNDFQINEYTMINLLSS 285
             K+F E+   D VS     +A   GV       +  L + + F   + N+    ++ SS
Sbjct: 330 CEKVFQEV---DTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSS 386

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           V    +   G+Q+     K GF+ VV + +AL +MY +C  + D+  +F+ +  +D VSW
Sbjct: 387 VDSSEL---GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSW 443

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            SMIAG++ +G   +A  +  +M+     PN  ++++IL A +  + L +  +VH H+++
Sbjct: 444 TSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR 503

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           + +    S+  CL++ Y KC  L  ++++      K+ + ++++ S         EAL L
Sbjct: 504 A-YGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSL 562

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           ++ +  +   ++    S ++  CA M     GK +H  A K     D+ V S+++ +Y K
Sbjct: 563 FQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSK 622

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            G ++D+++ F ++    L  W A++ GYAQHG   +   LF+ M + GVKPD +  ++V
Sbjct: 623 SGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSV 682

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C   GLV E   + + M  ++G+ P L HY C+VDLLGR G L  AK  I+ MP+ P
Sbjct: 683 LSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKP 742

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           ++ +W +LL+AC ++ ++ LG    +K+ E   D+   +  +SN+ A++G W  V ++RK
Sbjct: 743 NSMVWSTLLAACRVHDDVVLGRFVENKIHEENCDS-GCFATMSNIRANSGDWEGVMEIRK 801

Query: 706 EMKEKFLCKEPGYSWI 721
            +K+  + KEPG+S++
Sbjct: 802 SVKD--VEKEPGWSFL 815


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 186/594 (31%), Positives = 308/594 (51%), Gaps = 36/594 (6%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-TEPDVVSWSERIA 252
           + +Q+H   ++    S     L + I+++Y       D++ +F+ + + P  ++W   I 
Sbjct: 23  QAKQLHAQILRTSLPSP---SLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIR 79

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                   + +   F  +  +    +     ++L S    + LR G+ +     ++G   
Sbjct: 80  CYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGF 139

Query: 310 VVSIGNALISMYGKC---------------GQVNDA--------------RSIFDYLIFK 340
            +   NAL++MY K                G+ +D               R +F+ +  +
Sbjct: 140 DLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKR 199

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D VSWN++I+G ++NG    AL M   M    L P+ +T++S+L   +   +L +  ++H
Sbjct: 200 DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIH 259

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + I++G+  D  + S LI  Y KC  +++S RV   + + + +  N++ +  V      
Sbjct: 260 GYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFD 319

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           E L+ ++ +  +  + N  +FS ++ ACA +T L  GK +H   +++R+D ++F+ SA++
Sbjct: 320 EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALV 379

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG I  A+  F K+    +  W AM+MGYA HG  ++  +LF +M   GVKP+ +
Sbjct: 380 DMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYV 439

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
            ++AVLT+C HAGLV EA  Y + M+  + +IP LEHYA + DLLGRVG LE A   I  
Sbjct: 440 AFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISD 499

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           M I P   +W +LL+AC ++ NI+L      KL  + P N   YVLLSN+Y++AG W D 
Sbjct: 500 MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDA 559

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            KLR  M++K + K+P  SWI +    H F AGD SH     I + L  L E M
Sbjct: 560 RKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQM 613



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 239/508 (47%), Gaps = 54/508 (10%)

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHG 200
            +A+ +++  Y  +G F  S   F++M + G   +     +VL +     D++ GE +HG
Sbjct: 71  TLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHG 130

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRC---------------GQKLDAV------------ 233
             +++G   G   +  NA+MN+Y +                G+  D              
Sbjct: 131 CIIRLGM--GFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188

Query: 234 --KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+F+ + + D+VSW+  I+  A +G+  +A  + +++   D + + +T+ ++L     
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK+I  +  + G+   V IG++LI MY KC +V+D+  +F  L   D +SWNS+
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAG  +NG F++ L  F  ML   + PN  + +SI+ A ++  +L    Q+H +II+S F
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA-SCHA-EALELY 466
             +  + S L+  Y KC  +  ++ +  +++  + V   A+  ++ YA   HA +A+ L+
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAM--IMGYALHGHAYDAISLF 426

Query: 467 RTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           + +     + N   F  VL AC  A + D E  K  + +    R    +   +AV D+  
Sbjct: 427 KRMEVEGVKPNYVAFMAVLTACSHAGLVD-EAWKYFNSMTQDYRIIPGLEHYAAVADLLG 485

Query: 525 KCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGC-YHEVSNLFNKMSK--FGVKPDEI 580
           + G +E+A      +  +     W+ ++       C  H+   L  K+SK  F V P  I
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTLLA-----ACRVHKNIELAEKVSKKLFTVDPQNI 540

Query: 581 TYLAVLTSC-CHAGLVREARTYLSCMSD 607
               +L++    AG  ++AR     M D
Sbjct: 541 GAYVLLSNIYSAAGRWKDARKLRIAMRD 568



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 159/335 (47%), Gaps = 16/335 (4%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSL 87
               R+ F  +     RDI+++N +ISG A+      AL +   +    LRPD+FT SS+
Sbjct: 186 LGSLRKVFEMM---PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV 242

Query: 88  VKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           +       +L + + +HG  ++ G+ + V++ S  I+ YAK   +  +   F      D 
Sbjct: 243 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDG 302

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGF 201
           +++ +++ G V NG FD+  + F +M    ++ N  S ++++ A   +     G+Q+HG+
Sbjct: 303 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGY 362

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGV 258
            ++  F   V   + +A++++Y +CG    A  +FD++   D+VSW+  I   A      
Sbjct: 363 IIRSRFDGNV--FIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 420

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL-RAGKQIQAFCYKVGFMEVVSIGNAL 317
           +A  LFK +     + N    + +L++     ++  A K   +       +  +    A+
Sbjct: 421 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV 480

Query: 318 ISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIAG 351
             + G+ G++ +A   I D  I      W++++A 
Sbjct: 481 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+   I+NG+  D  + ++LI  + K      + R  +     D I++N++I+G  +  
Sbjct: 257 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 316

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                LK F ++    ++P+  +FSS++ AC    +L   + +HG  ++  F   V++ S
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G I +A   F      D V++TAM+ GY  +G    +  +F  M   G++ 
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436

Query: 178 NEFSLTAVLGA 188
           N  +  AVL A
Sbjct: 437 NYVAFMAVLTA 447


>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
 gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
          Length = 845

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 204/703 (29%), Positives = 367/703 (52%), Gaps = 21/703 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L++      D ++   L+    K  D   A RF      RD+I++  +++  AR   
Sbjct: 148 VHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGH 207

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              A   + R+  +G+ P+  TF +++ AC S ++ ++V+G  ++  + +   + +  I 
Sbjct: 208 IAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADLVYGNVVEAEWETDTMVANASIN 267

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            ++K G +  A   F      D  ++ AMV     +G   ++ E+F  M S  + +++ +
Sbjct: 268 MFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPS-EVAVDKTT 326

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           L   L    A   +++G+ IH    ++G  + V      A++ +Y RCG   +A ++FD 
Sbjct: 327 LVIALSTCAAPESLEDGKSIHSRVARLGLETDVVA--GTALVTMYSRCGDLGEARRVFDG 384

Query: 239 ITEPDVVSWSERIAAACDG----VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           I   +VVSW+  IAA          A  +F+ +  +  +    T +N++S+V  + +   
Sbjct: 385 ILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSV--- 441

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+  +    G      IG+AL++MY + G + DAR +F+ +I +D  +WN+++     
Sbjct: 442 GKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +G   +AL+ F  ML      N  T    L AVS  + +    ++H  I +SG   D+++
Sbjct: 502 HGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDR-VSYGRKLHGLIAESGLEADNNV 560

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVH-INALASVLVYASCHAEALELYRTIWGSC 473
            + LI+ Y +C +L +++     ++ K+ V   + +A+ +   SC  EA++L++ +    
Sbjct: 561 ANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQ-EAIDLFQRME--- 616

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            E +  TF+ VL+AC  ++   +GK +H  A +   + ++FV +A+I M+ K G + +A+
Sbjct: 617 LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEAR 676

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           R F  +   +LA WNAM+ GYAQ G    V + F+ M + GV PD IT+LAV+++C HAG
Sbjct: 677 RIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAG 736

Query: 594 LVRE-ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           LV + ART+ S   D +G+   LE Y C++DLL R G LE A   +  MP  P    W++
Sbjct: 737 LVEKGARTFASMGPD-YGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKT 795

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
           LL+AC I G++  G  A   ++E +P   + +V LS + + AG
Sbjct: 796 LLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSYMSSIAG 838



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 169/657 (25%), Positives = 314/657 (47%), Gaps = 16/657 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +YS +   G  LD     +++  F K      A R      +R ++ + ++++       
Sbjct: 50  VYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDED 109

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
              A   F R++ +G+ PD  TF S++ AC SL + E+VH + +     S V + +  ++
Sbjct: 110 VDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQGELVHRLIVDKNLESDVVIGNALMK 169

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
             AK  ++  A   F+     D +++T MV  Y  NG   ++   ++ M   G+  N  +
Sbjct: 170 MLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNIT 229

Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
             AVL A    ++ + ++G  V+  + +     + NA +N++ +CG    A  +F  +  
Sbjct: 230 FLAVLAACSSARDADLVYGNVVEAEWETD--TMVANASINMFSKCGCLDRAHDVFHRMKR 287

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV SW+  +AA        EA  LF+ +  ++  +++ T++  LS+      L  GK I
Sbjct: 288 WDVKSWNAMVAALAQHGFSSEALELFRRMP-SEVAVDKTTLVIALSTCAAPESLEDGKSI 346

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN-GF 357
            +   ++G    V  G AL++MY +CG + +AR +FD ++ K+ VSWN+MIA Y  +   
Sbjct: 347 HSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESL 406

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            ++AL++F  ML   + P   T  +++ AV      K   Q+H  I+ +G   D  + S 
Sbjct: 407 HSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGK---QLHGWIVDTGLYSDSFIGSA 463

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L+  Y +  +L +++RV  +I +++    NA+  V V      EALE +  +       N
Sbjct: 464 LVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGN 523

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
            +TF + L A +    +  G+ +H L  ++  + D  V +A+I MY +C ++EDA+  F 
Sbjct: 524 RATFLLALSAVSP-DRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFD 582

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++   S+  W +++      G   E  +LF +M    ++PD +T+  VL +C      RE
Sbjct: 583 RLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFTTVLEACTIVSAHRE 639

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            +   S   +L GL   +     ++ +  + G L  A+   + +  P  A  W ++L
Sbjct: 640 GKLVHSRAREL-GLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLA-CWNAML 694



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 160/343 (46%), Gaps = 9/343 (2%)

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           G +++ M+ KC  ++DA  +F+ ++ +  V W SM+  + ++   ++A   F  M    +
Sbjct: 66  GASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGV 125

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           +P+  T  SIL A    +SL Q   VH  I+      D  + + L+    KC  L+ + R
Sbjct: 126 LPDRVTFISILNAC---ESLAQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAAR 182

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
               + +++ +    + +        AEA   Y  +       N  TF  VL AC++  D
Sbjct: 183 FFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARD 242

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            +    ++   ++A ++ D  V +A I+M+ KCG ++ A   F ++ R  +  WNAM+  
Sbjct: 243 AD---LVYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAA 299

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
            AQHG   E   LF +M    V  D+ T +  L++C     + + ++  S ++ L GL  
Sbjct: 300 LAQHGFSSEALELFRRMPS-EVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARL-GLET 357

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            +     +V +  R G L  A+   D + +  +   W ++++A
Sbjct: 358 DVVAGTALVTMYSRCGDLGEARRVFDGI-LGKNVVSWNNMIAA 399



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 11/260 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +++ L+ ++G   D  ++  LIS + +      A R  FD  +++ I+++ ++I+     
Sbjct: 544 KLHGLIAESGLEADNNVANALISMYARCKSLEDA-RNTFDRLEDKSIVSWTSVIAACVDL 602

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                A+ LF R+    L PD  TF+++++AC    + +E ++VH    +LG  S V++ 
Sbjct: 603 GSCQEAIDLFQRME---LEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVA 659

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  ++K G +  A   F          + AM+ GY   G      + F  M+  G+ 
Sbjct: 660 TALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVA 719

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVK 234
            +  +  AV+ A       E+       +G   GV + L +   +++L  R GQ  +A  
Sbjct: 720 PDHITFLAVVSACSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYD 779

Query: 235 MFDEIT-EPDVVSWSERIAA 253
               +   P  V+W   +AA
Sbjct: 780 FLQGMPCGPSDVTWKTLLAA 799



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/367 (19%), Positives = 155/367 (42%), Gaps = 27/367 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++  ++  G + D  + + L++ + +     D RR F  + +   RD+  +NA++    
Sbjct: 444 QLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIE---RDVFAWNAIVGVCV 500

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS--LQENEIVHGVCLKLGFSSRVYL 115
              Q   AL+ F R+  +G   +  TF   + A     +     +HG+  + G  +   +
Sbjct: 501 GHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVSYGRKLHGLIAESGLEADNNV 560

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I  YA+   +  A   F    D   V++T+++   V  G   ++ ++F  M    L
Sbjct: 561 ANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---L 617

Query: 176 ELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E +  + T VL A   V   +EG+ +H    ++G  S V   +  A+++++ + G   +A
Sbjct: 618 EPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNV--FVATALIHMHSKFGNLGEA 675

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F+ +  P +  W+  +   A           F  ++      +  T + ++S+    
Sbjct: 676 RRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHA 735

Query: 290 RILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL----IFKDSVS 344
            ++  G +   +     G    +     LI +  + GQ+ +A   +D+L         V+
Sbjct: 736 GLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEA---YDFLQGMPCGPSDVT 792

Query: 345 WNSMIAG 351
           W +++A 
Sbjct: 793 WKTLLAA 799


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 205/697 (29%), Positives = 348/697 (49%), Gaps = 9/697 (1%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCL 105
           +N+ I+ L+        L  F  +    L PD FTF SL+KAC SLQ       +H   L
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
             GFSS  Y+ S  +  YAK G +  A   F +  + D V +TAM+  Y   G   ++  
Sbjct: 74  VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +  EMR  G++    +L  +L    ++ + + +H F V  GF   +   + N+++NLY +
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIA--VMNSMLNLYCK 191

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           C    DA  +FD++ + D+VSW+  I   A+  +  E   L   +R +  + ++ T    
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           LS  G    L  G+ +     K GF   + +  ALI+MY KCG+   +  + + +  KD 
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           V W  MI+G    G   +AL +F  ML+     +   +AS++ + +   S      VH +
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           +++ G+ LD   ++ LIT Y KC  L++S  +   +++++ V  NA+ S         +A
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431

Query: 463 LELYRTI-WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           L L+  + + + ++V+  T   +L+AC++   L  GK IHC+ +++       V++A++D
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY KCG +E A+R F  I    +  W  ++ GY  HG       ++++    G++P+ + 
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +LAVL+SC H G+V++     S M    G+ P  EH AC+VDLL R   +E A     + 
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
              P   +   +L AC   G  ++  +    ++EL+P +   YV L + +A+   W+DV 
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVS 671

Query: 702 KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           +   +M+   L K PG+S I + G T  F+   +SHS
Sbjct: 672 ESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 267/552 (48%), Gaps = 24/552 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  ++ NG   D  +S++L++ + KF     A +   + + RD++ + A+I   +R   
Sbjct: 68  IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
            G A  L + +R+QG++P   T   ++     + + + +H   +  GF   + +++  + 
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y K   +  A+  F      D V++  M+ GY   G   +  ++   MR  GL  ++ +
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247

Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             A L   G   D++ G  +H   VK GF   V  HL  A++ +Y++CG++  + ++ + 
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGF--DVDMHLKTALITMYLKCGKEEASYRVLET 305

Query: 239 ITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   DVV W+  I+         +A  +F ++  +   ++   + ++++S         G
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             +  +  + G+       N+LI+MY KCG ++ +  IF+ +  +D VSWN++I+GY++N
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425

Query: 356 GFFNQALDMFCHMLEFSLIP--NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
               +AL +F  M +F  +   + +T+ S+L+A S++ +L     +H  +I+S F+   S
Sbjct: 426 VDLCKALLLFEEM-KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS-FIRPCS 483

Query: 414 MI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
           ++ + L+  Y KC  L  ++R    I  K+ V    L +   +      ALE+Y     S
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHS 543

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDMYCKC 526
             E N   F  VL +C+    ++QG     L + +   +D  VE      + V+D+ C+ 
Sbjct: 544 GMEPNHVIFLAVLSSCSHNGMVQQG-----LKIFSSMVRDFGVEPNHEHLACVVDLLCRA 598

Query: 527 GTIEDAKRAFRK 538
             IEDA + +++
Sbjct: 599 KRIEDAFKFYKE 610


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 181/546 (33%), Positives = 291/546 (53%), Gaps = 8/546 (1%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+ +HG+ VK+     +   LNNA+M++Y +CG   +A  +F      +VVSW+  +   
Sbjct: 61  GKGVHGWAVKLRLDKELV--LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118

Query: 255 CDGVEAFGLFKDLRF-----NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
               +  G F  LR       D + +E T++N +     E  L + K++  +  K  F+ 
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
              + NA ++ Y KCG ++ A+ +F  +  K   SWN++I G++++     +LD    M 
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              L+P+ +T+ S+L A S  KSL+   +VH  II++    D  +   +++ Y  C  L 
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
             + +   ++ K+ V  N + +  +       AL ++R +     ++ G +   V  AC+
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  L  G+  H  ALK   + D F+  ++IDMY K G+I  + + F  +   S A WNA
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 418

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+MGY  HG   E   LF +M + G  PD++T+L VLT+C H+GL+ E   YL  M    
Sbjct: 419 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 478

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGA-KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           GL P L+HYAC++D+LGR G L+ A ++  ++M    D  IW+SLLS+C I+ N+++G  
Sbjct: 479 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 538

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
             +KL EL+P+    YVLLSNLYA  G W DV K+R+ M E  L K+ G SWI +     
Sbjct: 539 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 598

Query: 729 HFYAGD 734
            F  G+
Sbjct: 599 SFVVGE 604



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 276/596 (46%), Gaps = 48/596 (8%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQ----GLRPDAFTFSSLVKACGSLQENEI 99
           R+ +++N++I   +    S  +  L   +  +       PD  T  +++  C   +E EI
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA--REREI 58

Query: 100 -----VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
                VHG  +KL     + L +  ++ Y+K G I +A+M F+   + + V++  MV G+
Sbjct: 59  GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEG-----EQIHGFGVKVGFLS 209
              G+   + +V  +M + G ++    +T +        E      +++H + +K  F  
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF-- 176

Query: 210 GVCNHL-NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFK 265
            V N L  NA +  Y +CG    A ++F  I    V SW+  I   A + D   +     
Sbjct: 177 -VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 235

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            ++ +    + +T+ +LLS+    + LR GK++  F  +      + +  +++S+Y  CG
Sbjct: 236 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
           ++   +++FD +  K  VSWN++I GY +NGF ++AL +F  M+ + +   G +M  +  
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAV 444
           A S   SL+   + H++ +K   L DD+ I+C LI  Y K  ++ +S +V + + +K+  
Sbjct: 356 ACSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 414

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC-------AAMTDLEQG 497
             NA+           EA++L+  +  +    +  TF  VL AC         +  L+Q 
Sbjct: 415 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 474

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF-RKICRDSLAG-WNAMMMGYA 555
           K+   L    ++       + VIDM  + G ++ A R    ++  ++  G W +++    
Sbjct: 475 KSSFGLKPNLKH------YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 528

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL-----VREARTYLSCMS 606
            H        +  K+  F ++P++     VL S  +AGL     VR+ R  ++ MS
Sbjct: 529 IHQNLEMGEKVAAKL--FELEPEKPENY-VLLSNLYAGLGKWEDVRKVRQRMNEMS 581



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 196/432 (45%), Gaps = 19/432 (4%)

Query: 243 DVVSWSERIAAACDG---VEAFGLFKDLRFND----FQINEYTMINLLSSVGGERILRAG 295
           + VSW+  I    D     E+F L  ++   +    F  +  T++ +L     ER +  G
Sbjct: 2   NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           K +  +  K+   + + + NAL+ MY KCG + +A+ IF     K+ VSWN+M+ G+S  
Sbjct: 62  KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121

Query: 356 GFFNQALDMFCHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           G  +   D+   ML     +  +  T+ + +    +   L    ++H + +K  F+ ++ 
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + +  + +Y KC +L+ ++RV   I  K     NAL      ++    +L+ +  +  S 
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 241

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              +  T   +L AC+ +  L  GK +H   ++   ++D+FV  +V+ +Y  CG +   +
Sbjct: 242 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 301

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC--- 590
             F  +   SL  WN ++ GY Q+G       +F +M  +G++   I+ + V  +C    
Sbjct: 302 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 361

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYAC-IVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
              L REA  Y      L  L+      AC ++D+  + G +  +    + +     A  
Sbjct: 362 SLRLGREAHAYA-----LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS- 415

Query: 650 WQSLLSACTIYG 661
           W +++    I+G
Sbjct: 416 WNAMIMGYGIHG 427



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 17/281 (6%)

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLE----FSLIPNGYTMASILEAVSNSKSLKQ 395
           ++ VSWNSMI  +S+NGF  ++  +   M+E     + +P+  T+ ++L   +  + +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 396 AMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
              VH   +K    LD  ++  + L+  Y KC  +  ++ +    + KN V  N +    
Sbjct: 61  GKGVHGWAVK--LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQ 511
                     ++ R +     +V     +I+  +  C   + L   K +HC +LK  +  
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           +  V +A +  Y KCG++  A+R F  I   ++  WNA++ G+AQ        +   +M 
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
             G+ PD  T  ++L++C     +R  +       ++HG I
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGK-------EVHGFI 272



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 151/327 (46%), Gaps = 12/327 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           + +++   ++ + K      A R     +++ + ++NALI G A+      +L    +++
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             GL PD+FT  SL+ AC    SL+  + VHG  ++      +++    +  Y   GE+ 
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
           + +  F    D   V++  ++ GY+ NG  D++  VF +M   G++L   S+  V GA  
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 191 ---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
               ++ G + H + +K   L      +  +++++Y + G    + K+F+ + E    SW
Sbjct: 359 LLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 416

Query: 248 SERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFCY 303
           +  I      G+  EA  LF++++      ++ T + +L++     ++  G + +     
Sbjct: 417 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 476

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDA 330
             G    +     +I M G+ GQ++ A
Sbjct: 477 SFGLKPNLKHYACVIDMLGRAGQLDKA 503


>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
 gi|223945665|gb|ACN26916.1| unknown [Zea mays]
 gi|224028321|gb|ACN33236.1| unknown [Zea mays]
          Length = 780

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 206/736 (27%), Positives = 382/736 (51%), Gaps = 28/736 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q+Y    K+G   D  + +T++    K      A R   D + R  ++ +N  ISG  R 
Sbjct: 56  QLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRN 115

Query: 60  CQSGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
            +    +++F D +R     P++FT+S ++ AC + +E      VHG+ L+      V++
Sbjct: 116 GEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFV 175

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y K G++ +A   F      + V++T  + G+V   +   +  +  EM   G+
Sbjct: 176 GTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGV 235

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD 231
            +N+++ T++L A      ++E  Q+HG  +K   +L  V   +  A+++ Y   G    
Sbjct: 236 AINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHV---VKEALISTYANAGAVQL 292

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV------EAFGLFKDLRFNDFQINEYTMINLLSS 285
             K+F E+   D VS     +A   GV       +  L + + F   + N+    ++ SS
Sbjct: 293 CEKVFQEV---DTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSS 349

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           V    +   G+Q+     K GF+ VV + +AL +MY +C  + D+  +F+ +  +D VSW
Sbjct: 350 VDSSEL---GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSW 406

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
            SMIAG++ +G   +A  +  +M+     PN  ++++IL A +  + L +  +VH H+++
Sbjct: 407 TSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR 466

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           + +    S+  CL++ Y KC  L  ++++      K+ + ++++ S         EAL L
Sbjct: 467 A-YGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSL 525

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           ++ +  +   ++    S ++  CA M     GK +H  A K     D+ V S+++ +Y K
Sbjct: 526 FQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSK 585

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            G ++D+++ F ++    L  W A++ GYAQHG   +   LF+ M + GVKPD +  ++V
Sbjct: 586 SGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSV 645

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C   GLV E   + + M  ++G+ P L HY C+VDLLGR G L  AK  I+ MP+ P
Sbjct: 646 LSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKP 705

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           ++ +W +LL+AC ++ ++ LG    +K+ E   D+   +  +SN+ A++G W  V ++RK
Sbjct: 706 NSMVWSTLLAACRVHDDVVLGRFVENKIHEENCDS-GCFATMSNIRANSGDWEGVMEIRK 764

Query: 706 EMKEKFLCKEPGYSWI 721
            +K+  + KEPG+S++
Sbjct: 765 SVKD--VEKEPGWSFL 778


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 208/734 (28%), Positives = 371/734 (50%), Gaps = 27/734 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+Y +  K+G   D  + + +I    K   F  A +   D      + +N +ISG  R  
Sbjct: 90  QVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRND 149

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           Q   A+ +F  +      P++FT+S ++ AC    E      VHG+ L+      V++ +
Sbjct: 150 QDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGT 209

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YAKSG++++A   F      + V++T  + G+V   E   +  +  EM   G+ +
Sbjct: 210 SIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSM 269

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+++ T++L A    + ++E  Q+HG  +K      + + +  A++  Y   G    +  
Sbjct: 270 NKYTATSILLACSQMYMIREVSQMHGMIMKKELY--LDHAVKEALICTYANIGAIELSET 327

Query: 235 MFDEI-TEPDVVSWSERIAAACDGVEAFGLFKDLRF------NDFQINEYTMINLLSSVG 287
            F+E+ T      WS  I+    GV +  L + L+          + N+    ++ SS+ 
Sbjct: 328 AFEEVGTVSSTRIWSTFIS----GVSSHSLPRSLQLLMRMFRQGLRPNDRCYASVFSSMD 383

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               +  G+Q+ +   K GF+  V +G+AL +MY +   + D+  +F  +  +D VSW +
Sbjct: 384 S---IEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTA 440

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           M+AG++ +G   +A  +F  M+     P+  T+++IL A    + L +   +H HI++  
Sbjct: 441 MVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVH 500

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             +  S+  CL++ Y KC     ++R+      K+ V  +++ S      C AEA+ L++
Sbjct: 501 GEIT-SISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQ 559

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +  +  +++    S +L  CA +     GK +H  A+KA    D+ V S+++ +Y K G
Sbjct: 560 LMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSG 619

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            + D+++ F +I    L  W A++ GYAQHG   +   +F+ M   GVKPD +  ++VL+
Sbjct: 620 NLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLS 679

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C   GLV E   Y   M  ++G+ P L HY C+VDLLGR G L+ AK  I+ MP+  D 
Sbjct: 680 ACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADL 739

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W +L +AC ++ +  LG    +K+ E   D+ S +  LSN+ A++G W +V ++RK M
Sbjct: 740 MVWSTLFAACRVHNDAVLGGFVENKIREDGYDSGS-FATLSNILANSGDWEEVARVRKSM 798

Query: 708 KEKFLCKEPGYSWI 721
             K   KEPG+S +
Sbjct: 799 DVK---KEPGWSMV 809



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 169/652 (25%), Positives = 287/652 (44%), Gaps = 48/652 (7%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL  F   R  G  P    F   + AC   G +   E V+ V  K G +   Y+ SG I+
Sbjct: 53  ALASFVLSRAVGNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMID 112

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
             AKSG    A   F D      V +  ++ G V N +   + ++F +M     E N F+
Sbjct: 113 LLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFT 172

Query: 182 LTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
            + VL A     E   G  +HG  ++      V   +  +I+N+Y + G  + A++ F  
Sbjct: 173 YSGVLSACAMGAELCVGRAVHGLVLRRDPEYDV--FVGTSIVNMYAKSGDMIAAMREFWR 230

Query: 239 ITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +   +VVSW+  IA      + V A  L +++  +   +N+YT  ++L +     ++R  
Sbjct: 231 MPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREV 290

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSE 354
            Q+     K       ++  ALI  Y   G +  + + F+ +    S   W++ I+G S 
Sbjct: 291 SQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSS 350

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +    ++L +   M    L PN    AS+    S+  S++   Q+HS +IK GF+ D  +
Sbjct: 351 HS-LPRSLQLLMRMFRQGLRPNDRCYASVF---SSMDSIEFGRQLHSLVIKDGFVHDVLV 406

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S L T Y + + L +S RV  E+ +++ V   A+ +         EA  L+R +     
Sbjct: 407 GSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGF 466

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + +  T S +L AC     L +GK IH   L+  + +   +   ++ MY KC   + A+R
Sbjct: 467 KPDYVTLSAILSACDKPECLLKGKTIHGHILRV-HGEITSISHCLVSMYSKCQEAQTARR 525

Query: 535 AFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            F    C+D +  +++M+ GY+ +GC  E  +LF  M   G + D     ++L+ C  A 
Sbjct: 526 IFDATPCKDQVM-FSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLC--AD 582

Query: 594 LVREARTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           + R     L     LH      G++  L   + +V L  + G L  ++   D++   PD 
Sbjct: 583 IARPLYGKL-----LHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEI-TSPDL 636

Query: 648 HIWQSLLSACTIYGN-------IDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
             W +++     +G+        DL +  G K     PD   T VL+S L A
Sbjct: 637 VTWTAIIDGYAQHGSGRDALEMFDLMITLGVK-----PD---TVVLVSVLSA 680


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 287/549 (52%), Gaps = 5/549 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGLFK--DLRFND 271
           L N ++N+Y +      A  +       +VVSW+  ++  A +G  +  LF+  ++R   
Sbjct: 44  LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREG 103

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
              N++T   +  +V   R+   GKQI A   K G +  V +G +   MY K    +DAR
Sbjct: 104 VAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD +  ++  +WN+ I+    +G   +A++ F         PN  T    L A S+  
Sbjct: 164 KLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGL 223

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L   MQ+H  + +SGF  D S+ + LI  YGKC  +  S+ + +E+  KNAV   +L +
Sbjct: 224 LLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVA 283

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             V      +A  LY        E +    S VL ACA M  LE G++IH  A+KA  ++
Sbjct: 284 AYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           +IFV SA++DMY KCG IED+++AF ++   +L   N+++ GYA  G       LF  M+
Sbjct: 344 NIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMA 403

Query: 572 KF--GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
               G  P+ +T++++L++C  AG V         M   +G+ P  EHY+CIVD+LGR G
Sbjct: 404 PRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAG 463

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
           ++E A   I +MPI P   +W +L +AC ++G   LG+LA   L +L P +   +VLLSN
Sbjct: 464 MVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSN 523

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
            +A+AG W +   +R+EMK   + K  GYSWI V    H F A D SH  +KEI   L K
Sbjct: 524 TFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTK 583

Query: 750 LYEHMVATA 758
           L   M A  
Sbjct: 584 LRNKMEAAG 592



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 212/445 (47%), Gaps = 16/445 (3%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           P L+  LI+ ++K      A   L  T  R+++++ +L+SGLA+      AL  F  +R 
Sbjct: 42  PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRR 101

Query: 75  QGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +G+ P+ FTF  + KA  SL+     + +H + +K G    V++     + Y K+     
Sbjct: 102 EGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F +  + +   + A +   V +G   ++ E F+E R +G + N  +    L A  D
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221

Query: 192 ---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
              +  G Q+HG   + GF + V  +  N +++ Y +C Q   +  +F E+   + VSW 
Sbjct: 222 GLLLDLGMQMHGLVFRSGFDTDVSVY--NGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWC 279

Query: 249 ERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             +AA     E   A  L+   R    + +++ + ++LS+  G   L  G+ I A   K 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                + +G+AL+ MYGKCG + D+   FD +  K+ V+ NS+I GY+  G  + AL +F
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALF 399

Query: 366 CHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITT 421
             M        PN  T  S+L A S + +++  M++    +KS + ++      SC++  
Sbjct: 400 EDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDS-MKSTYGIEPGAEHYSCIVDM 458

Query: 422 YGKCNALNESKRVLSEIDKKNAVHI 446
            G+   + ++   + ++  K  + +
Sbjct: 459 LGRAGMVEQAFEFIKKMPIKPTISV 483



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 170/362 (46%), Gaps = 17/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           QI++L +K G  LD  +  +    + K    R   R LFD    R++ T+NA IS     
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCK-TRLRDDARKLFDEIPERNLETWNAYISNSVTD 187

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
            +   A++ F   R  G +P++ TF   + AC     L     +HG+  + GF + V + 
Sbjct: 188 GRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVY 247

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +G I+ Y K  +I S+E+ F +    + V++ ++V  YV N E +K+  +++  R   +E
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVE 307

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F +++VL A      ++ G  IH   VK      +   + +A++++Y +CG   D+ 
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNI--FVGSALVDMYGKCGCIEDSE 365

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDL--RFNDFQINEYTMINLLSSVGG 288
           + FDE+ E ++V+ +  I       +   A  LF+D+  R      N  T ++LLS+   
Sbjct: 366 QAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSR 425

Query: 289 ERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WN 346
              +  G +I  +     G        + ++ M G+ G V  A      +  K ++S W 
Sbjct: 426 AGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWG 485

Query: 347 SM 348
           ++
Sbjct: 486 AL 487



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 1/114 (0%)

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKR 534
           +      ++LK   + + +  G+ +H   +K        F+ + +I+MY K    E A+ 
Sbjct: 4   LTADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
             R     ++  W +++ G AQ+G +      F +M + GV P++ T+  V  +
Sbjct: 64  VLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKA 117


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 174/507 (34%), Positives = 272/507 (53%), Gaps = 33/507 (6%)

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           + LL     +R L+ GKQ+ A     G + +  I N L+ MY KCG + DA  +FD ++ 
Sbjct: 123 LTLLKFCLKQRALKEGKQVHAHIKTSGSIGLY-ISNRLLDMYAKCGSLVDAEKVFDEMVH 181

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHM------------------------LEFSLI- 374
           +D  SWN MI+GY + G F +A ++F  M                        LE   + 
Sbjct: 182 RDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLM 241

Query: 375 -------PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
                   N  T++S L A +   SL    ++H HI++ G   D+ +   L+  YGKC +
Sbjct: 242 QKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGS 301

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + E++ +  ++++++ V    +    +      E   L+R +  S    N  TF+ VL A
Sbjct: 302 IEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNA 361

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA +   + GK IH   ++  +D      SA++ MY KCG IE+AK  F  + +  L  W
Sbjct: 362 CADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSW 421

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            ++++GYAQHG + +  + F  + K G KPD I ++ VL++C HAGLV +   Y   + +
Sbjct: 422 TSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKE 481

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            HGL   ++HYACI+DLL R G    A+  I++MPI PD +IW +LL  C I+GN++L  
Sbjct: 482 KHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAK 541

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
            A   L E++P+N +TYV L+N+YASAGM  +   +R+ M  + + K+PG SWI +    
Sbjct: 542 RAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREV 601

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHM 754
           H F  GD+SH +SKEI + L +L + M
Sbjct: 602 HVFSVGDNSHPKSKEILEYLSELSKRM 628



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 215/463 (46%), Gaps = 65/463 (14%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFD------RLR------YQGLRPDAFTFSSLVKAC 91
           + II ++   + + R C S    +  D      RLR      Y+  +P A  + +L+K C
Sbjct: 70  KKIILFDGKDAYINRLCDSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFC 129

Query: 92  ---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
               +L+E + VH   +K   S  +Y+ +  ++ YAK G +V AE  F + +  D  ++ 
Sbjct: 130 LKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWN 188

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD----------------- 191
            M+ GYV  G F+K++ +F +M +     + FS TA++                      
Sbjct: 189 IMISGYVKGGNFEKARNLFDKMPN----RDNFSWTAIISGCVQHNRPEEALELYRLMQKH 244

Query: 192 ----------------------VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
                                 +  G++IHG  +++G  S     +  +++++Y +CG  
Sbjct: 245 DYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEV--VWCSLLDMYGKCGSI 302

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A  +FD++ E DVVSW+  I          E F LF+ L  ++   N++T   +L++ 
Sbjct: 303 EEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNAC 362

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                   GKQI A+  +VGF    S  +AL+ MY KCG + +A+S+F+ L   D  SW 
Sbjct: 363 ADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWT 422

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIK 405
           S++ GY+++G  ++AL  F  +L+    P+G     +L A +++  + + ++  HS   K
Sbjct: 423 SLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEK 482

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
            G        +C+I    +     E++ +++E+  K   +I A
Sbjct: 483 HGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWA 525



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 214/461 (46%), Gaps = 44/461 (9%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +KEG+Q+H   +K     G+  +++N ++++Y +CG  +DA K+FDE+   D+ SW+  I
Sbjct: 135 LKEGKQVHAH-IKTSGSIGL--YISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMI 191

Query: 252 AAACDG----------------------------------VEAFGLFKDLRFNDF-QINE 276
           +    G                                   EA  L++ ++ +D+ + N+
Sbjct: 192 SGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNK 251

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            T+ + L++      L  GK+I     ++G      +  +L+ MYGKCG + +AR IFD 
Sbjct: 252 CTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDK 311

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  +D VSW +MI  Y +NG   +   +F H++  +++PN +T A +L A ++  +    
Sbjct: 312 MEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLG 371

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q+H+++++ GF    S  S L+  Y KC  +  +K V   + + +     +L       
Sbjct: 372 KQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQH 431

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFV 515
             H +AL  +  +  S  + +G  F  VL ACA    +++G +  H +  K    + I  
Sbjct: 432 GQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDH 491

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
            + +ID+  + G   +A+    ++  +     W A++ G   HG   E++    K S F 
Sbjct: 492 YACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNL-ELAKRAAK-SLFE 549

Query: 575 VKPD-EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           ++P+   TY+ +      AG+  E       M D  G++ +
Sbjct: 550 IEPENPATYVTLANIYASAGMRAEEANIRETM-DSRGIVKK 589



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 168/353 (47%), Gaps = 16/353 (4%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFD 70
           H D      +IS + K  +F +A R LFD   NRD  ++ A+ISG  +  +   AL+L+ 
Sbjct: 181 HRDLCSWNIMISGYVKGGNFEKA-RNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYR 239

Query: 71  RL-RYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
            + ++   + +  T SS + A     SL   + +HG  +++G  S   +    ++ Y K 
Sbjct: 240 LMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKC 299

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G I  A   F    + D V++T M+  Y+ NG  ++   +F  + +  +  N+F+   VL
Sbjct: 300 GSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVL 359

Query: 187 GASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            A  D+     G+QIH + V+VGF S   +   +A++++Y +CG   +A  +F+ + +PD
Sbjct: 360 NACADLAAEDLGKQIHAYMVRVGFDS--FSSAASALVHMYSKCGDIENAKSVFEILPQPD 417

Query: 244 VVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQ 299
           + SW+  +   A      +A   F+ L  +  + +    I +LS+     ++  G +   
Sbjct: 418 LFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFH 477

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAG 351
           +   K G    +     +I +  + GQ  +A SI + +  K D   W +++ G
Sbjct: 478 SIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 151/365 (41%), Gaps = 64/365 (17%)

Query: 354 ENGFFNQALDMFC---------HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           ++  F +A+D+ C          +L     P      ++L+     ++LK+  QVH+HI 
Sbjct: 87  DSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIK 146

Query: 405 KSG--------FLLD---------------DSMI-------SCLITTYGKCNALNESKRV 434
            SG         LLD               D M+       + +I+ Y K     +++ +
Sbjct: 147 TSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNL 206

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTD 493
             ++  ++     A+ S  V  +   EALELYR +      + N  T S  L A AA+  
Sbjct: 207 FDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPS 266

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GK IH   ++   D D  V  +++DMY KCG+IE+A+  F K+    +  W  M+  
Sbjct: 267 LHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHT 326

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC-----------HAGLVREARTYL 602
           Y ++G   E   LF  +    + P++ T+  VL +C            HA +VR      
Sbjct: 327 YLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSF 386

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           S  +            + +V +  + G +E AK   + +P  PD   W SLL     +G 
Sbjct: 387 SSAA------------SALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQ 433

Query: 663 IDLGL 667
            D  L
Sbjct: 434 HDKAL 438



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I+  +++ G   D ++  +L+  + K      A R++FD  + RD++++  +I    + 
Sbjct: 272 KIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEA-RYIFDKMEERDVVSWTTMIHTYLKN 330

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +      LF  L    + P+ FTF+ ++ AC  L   ++   +H   +++GF S     
Sbjct: 331 GRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAA 390

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y+K G+I +A+  F      D  ++T+++ GY  +G+ DK+   F  +   G +
Sbjct: 391 SALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTK 450

Query: 177 LNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            +  +   VL A      V +G E  H    K G L+   +H    I++L  R GQ  +A
Sbjct: 451 PDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHG-LTRTIDHY-ACIIDLLARAGQFTEA 508

Query: 233 VKMFDEIT-EPDVVSWS 248
             + +E+  +PD   W+
Sbjct: 509 ESIINEMPIKPDKYIWA 525


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 186/561 (33%), Positives = 314/561 (55%), Gaps = 11/561 (1%)

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
           +I    +K GF     + L N +++ Y++CG  + A K+FDE+    +V+W+  IA+   
Sbjct: 98  KIQSHALKRGF----HHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIR 153

Query: 257 G---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI--QAFCYKVGFMEVV 311
                EA  +++ +  +    +E+T  ++  +     ++  G++   Q+    VG   V 
Sbjct: 154 NGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVF 213

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            +G+AL+ MY K G++ DAR + D ++ KD V + ++I GYS +G   ++L +F +M + 
Sbjct: 214 -VGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK 272

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            +  N YT++S+L    N + L     +H  I+K+G     +  + L+T Y +C  +++S
Sbjct: 273 GIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDS 332

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +V  +    N V   ++   LV       AL  +R +  S    N  T S VL+AC+++
Sbjct: 333 LKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL 392

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
             LEQGK IH + +K   D D +V +A+ID Y KCG+ E A+  F  +    +   N+M+
Sbjct: 393 AMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 452

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
             YAQ+G  HE   LF+ M   G++P+ +T+L VL++C +AGL+ E     S   +   +
Sbjct: 453 YSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI 512

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
               +HYAC+VDLLGR G L+ A+M I+Q+ I  D  IW++LLSAC I+G++++     +
Sbjct: 513 ELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMN 571

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           ++++L P++  T+VLLSNLYAS G W+ V +++  M+E  L K P  SW+ V    H F 
Sbjct: 572 RVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFM 631

Query: 732 AGDSSHSQSKEIYKELIKLYE 752
           AGD SH   ++I ++L +L E
Sbjct: 632 AGDWSHPNFRDIREKLEELIE 652



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 239/462 (51%), Gaps = 15/462 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I S  +K G H    L   LI  + K      A +   +  +R I+ +N++I+   R  
Sbjct: 98  KIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 155

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFS-SRVYLV 116
           +S  A+ ++ R+   G+ PD FTFSS+ KA    G + E +  HG  + LG   S V++ 
Sbjct: 156 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 215

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK G++  A +     +  D V +TA++ GY  +GE  +S +VF  M   G+E
Sbjct: 216 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 275

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NE++L++VL   G   D+  G  IHG  VK G  S V +    +++ +Y RCG   D++
Sbjct: 276 ANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQ--TSLLTMYYRCGLVDDSL 333

Query: 234 KMFDEITEPDVVSWSERIAAAC-DGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGER 290
           K+F +   P+ V+W+  I     +G E   L  F+ +  +    N +T+ ++L +     
Sbjct: 334 KVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLA 393

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +L  GKQI A   K G      +G ALI  YGKCG    ARS+F+ L+  D VS NSMI 
Sbjct: 394 MLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIY 453

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL- 409
            Y++NGF ++AL +F  M +  L PN  T   +L A +N+  L++   + S    SG + 
Sbjct: 454 SYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIE 513

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           L     +C++   G+   L E++ ++++++  + V    L S
Sbjct: 514 LTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLS 555



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 145/302 (48%), Gaps = 17/302 (5%)

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           +S+++     KS+    ++ SH +K GF    S+ + LI  Y KC ++  +++V  E+  
Sbjct: 81  SSLIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPH 138

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           ++ V  N++ +  +      EA+++Y+ +       +  TFS V KA + +  + +G+  
Sbjct: 139 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 198

Query: 501 HCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           H  ++       ++FV SA++DMY K G + DA+    ++    +  + A+++GY+ HG 
Sbjct: 199 HGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGE 258

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ----- 614
             E   +F  M+K G++ +E T  +VL  C +   +   R        +HGLI +     
Sbjct: 259 DGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRL-------IHGLIVKAGLES 311

Query: 615 -LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            +     ++ +  R GL++ +     Q  I P+   W S++      G  ++ LL   ++
Sbjct: 312 AVASQTSLLTMYYRCGLVDDSLKVFKQF-INPNQVTWTSVIVGLVQNGREEIALLKFRQM 370

Query: 674 LE 675
           L 
Sbjct: 371 LR 372


>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
          Length = 770

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 170/542 (31%), Positives = 289/542 (53%), Gaps = 4/542 (0%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQ 273
           N++++LY +CG+ +DA+K+FDE+   DV+S +          E    F L K +      
Sbjct: 94  NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-LGSGG 152

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            +  T+  +LS           K I A     G+ + +S+GN LI+ Y KCG     R +
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  ++ ++  ++I+G  EN      L +F  M    + PN  T  S L A S S+ +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            +  Q+H+ + K G   +  + S L+  Y KC ++ ++  +     + + V +  +   L
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  EA++ +  +  +  E++ +  S VL        L  GK +H L +K ++  + 
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           FV + +I+MY KCG + D++  FR++ + +   WN+M+  +A+HG       L+ +M+  
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            VKP ++T+L++L +C H GL+ + R  L+ M ++HG+ P+ EHY CI+D+LGR GLL+ 
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           AK  ID +P+ PD  IWQ+LL AC+ +G+ ++G  A  +L +  PD+ S ++L++N+Y+S
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
            G W +  K  K MK   + KE G S I +   TH F   D  H Q++ IY  L  L+  
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632

Query: 754 MV 755
           MV
Sbjct: 633 MV 634



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 184/367 (50%), Gaps = 15/367 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
           I++L I +G+  +  +   LI+ + K      + R +FD   +R++IT  A+ISGL    
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFK-CGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
                L+LF  +R   + P++ T+ S + AC   Q   E + +H +  K G  S + + S
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIES 295

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G I  A   F    ++D V+ T ++ G   NG  +++ + F+ M   G+E+
Sbjct: 296 ALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   ++AVLG SF    +  G+Q+H   +K  F SG    +NN ++N+Y +CG   D+  
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF-SG-NTFVNNGLINMYSKCGDLTDSQT 413

Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + + VSW+  IAA      G+ A  L++++   + +  + T ++LL +     +
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473

Query: 292 LRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
           +  G+++     +V G          +I M G+ G + +A+S  D L  K D   W +++
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533

Query: 350 AGYSENG 356
              S +G
Sbjct: 534 GACSFHG 540



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 18/405 (4%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + N+L+S+Y KCG++ DA  +FD +  +D +S N +  G+  N        +   ML   
Sbjct: 92  VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
              +  T+  +L      +       +H+  I SG+  + S+ + LIT+Y KC      +
Sbjct: 152 GFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            V   +  +N + + A+ S L+    H + L L+  +       N  T+   L AC+   
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            + +G+ IH L  K   + ++ +ESA++DMY KCG+IEDA   F             +++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           G AQ+G   E    F +M + GV+ D     AVL        V      L     LH L+
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG-------VSFIDNSLGLGKQLHSLV 383

Query: 613 PQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN--ID 664
            + +          ++++  + G L  ++    +MP   +   W S+++A   +G+    
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAA 442

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           L L      LE++P  + T++ L +  +  G+ +   +L  EMKE
Sbjct: 443 LKLYEEMTTLEVKP-TDVTFLSLLHACSHVGLIDKGRELLNEMKE 486



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL+IK     +  ++  LI+ ++K  D   +         R+ +++N++I+  AR  
Sbjct: 378 QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----------LQENEIVHGV 103
               ALKL++ +    ++P   TF SL+ AC            L E + VHG+
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 190/575 (33%), Positives = 310/575 (53%), Gaps = 16/575 (2%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           V + ++IH   VK G        L   ++N+Y +CG    A K+FDE+   +VVSW+  +
Sbjct: 85  VSDAQKIHAHIVKTGAHKDA--FLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLM 142

Query: 252 AAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                  +   A  +F+++         YT+   LS+         GKQI  +  K    
Sbjct: 143 TGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIE 202

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
              SIGN+L S+Y KCG +  A   F  +  K+ +SW ++I+ + +NG     L  F  M
Sbjct: 203 FDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEM 262

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L   + PN +T+ S L      +SL    Q+HS  IK GF  +  + + ++  Y KC  +
Sbjct: 263 LSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWI 322

Query: 429 NESKRVLSEIDKKNAVHINAL----ASVLVYA-------SCHAEALELYRTIWGSCREVN 477
           +E+K++  E++  + V  NA+    A ++ +A        C  EAL ++  +  S  + +
Sbjct: 323 HEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPD 382

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             TFS VL  C+++  LEQG+ +H   +K  +  D+ V +A+++MY KCG+IE A +AF 
Sbjct: 383 LFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFV 442

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++   +L  W +M+ GYAQ+G   +   LF  M   GV+P++IT++ VL++C HAG+V E
Sbjct: 443 EMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDE 502

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
           A  Y   M + + + P ++HYAC++D+  R+G L+ A   I +M + P+  IW  L++ C
Sbjct: 503 ALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGC 562

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
              G ++LG  A  +LL L+P +  TY LL N+Y SAG W +V ++RK MKE+ L +   
Sbjct: 563 RSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKD 622

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           +SWI +    + F     SH+QS E+Y+ L  L+E
Sbjct: 623 WSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHE 657



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 164/622 (26%), Positives = 281/622 (45%), Gaps = 86/622 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++ ++K G H D  L T L++ + K      A +   +   R+++++  L++G     
Sbjct: 90  KIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDS 149

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           +   A+++F  +   G  P  +T  + + A   L   E+   +HG  +K        + +
Sbjct: 150 KPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGN 209

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
                Y+K G +  A   FR   D + +++T ++  +  NGE     + FVEM S  +E 
Sbjct: 210 SLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEP 269

Query: 178 NEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           NEF+LT+ L       S D+  G QIH   +K+GF S +   + N+IM LY++CG   +A
Sbjct: 270 NEFTLTSALSLCCVMQSLDI--GTQIHSLTIKLGFESNL--PIKNSIMYLYLKCGWIHEA 325

Query: 233 VKMFDEITEPDVVSWSERIAA-------ACD-------GVEAFGLFKDLRFNDFQINEYT 278
            K+FDE+    +V+W+  IA        A D       G EA  +F  L  +  + + +T
Sbjct: 326 KKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFT 385

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
             ++LS       L  G+Q+ A   K GF+  V +G AL++MY KCG +  A   F  + 
Sbjct: 386 FSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMS 445

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +  +SW SMI GY++NG   QAL +F  M    + PN  T   +L A S++  + +A+ 
Sbjct: 446 IRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALD 505

Query: 399 VHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            +  ++K+ + +   M   +CLI  + +   L+E+   + E+D                 
Sbjct: 506 -YFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMD----------------- 547

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG--KAIHCLALKARYDQDIF 514
                 LE    IW           SI++  C +   LE G   A   L LK +   D  
Sbjct: 548 ------LEPNEFIW-----------SILIAGCRSQGKLELGFYAAEQLLNLKPK---DTE 587

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDS----LAGWNAMMM------------GYAQHG 558
             + +++MY   G  ++  R  RK+ ++     L  W+ + +             +AQ G
Sbjct: 588 TYNLLLNMYLSAGKWKEVSRV-RKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSG 646

Query: 559 -CYHEVSNLFNKMSKFGVKPDE 579
             Y  + NL  K   FG + +E
Sbjct: 647 EMYELLGNLHEKAKSFGYEWEE 668



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 211/445 (47%), Gaps = 16/445 (3%)

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           + +L     ++++   ++I A   K G  +   +   L+++Y KCG +  AR +FD L  
Sbjct: 73  VPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPR 132

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           ++ VSW +++ GY  +     A+ +F  MLE    P  YT+ + L A S+  S +   Q+
Sbjct: 133 RNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQI 192

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H + IK     D S+ + L + Y KC +L  + +    I  KN +    + S        
Sbjct: 193 HGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEA 252

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           A  L+ +  +   C E N  T +  L  C  M  L+ G  IH L +K  ++ ++ +++++
Sbjct: 253 ATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSI 312

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ-----------HGCYHEVSNLFN 568
           + +Y KCG I +AK+ F ++   SL  WNAM+ G+A+           H C  E  ++F 
Sbjct: 313 MYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFL 372

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           K+++ G+KPD  T+ +VL+ C     + +    +   +   G +  +     +V++  + 
Sbjct: 373 KLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQ-VHAQTIKTGFLSDVVVGTALVNMYNKC 431

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL--AGSKLLELQPDNESTYVL 686
           G +E A     +M I      W S+++     G     LL     +L  ++P N+ T+V 
Sbjct: 432 GSIERASKAFVEMSIRTLIS-WTSMITGYAQNGQPQQALLLFEDMRLAGVRP-NKITFVG 489

Query: 687 LSNLYASAGMWNDVGKLRKEMKEKF 711
           + +  + AGM ++     + MK ++
Sbjct: 490 VLSACSHAGMVDEALDYFQMMKNEY 514



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 55/114 (48%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           +V  + +  +L+ C     +   + IH   +K    +D F+ + ++++Y KCGT+E A++
Sbjct: 66  KVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARK 125

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            F ++ R ++  W  +M GY           +F +M + G  P   T    L++
Sbjct: 126 VFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSA 179


>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 179/538 (33%), Positives = 277/538 (51%), Gaps = 45/538 (8%)

Query: 226 CGQKLD-----AVKMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINE 276
           C Q L      A+ +  ++  P++  ++  I        D +E   ++K +       + 
Sbjct: 81  CAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDN 140

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           YT+  +L +    R +R G+++     K+G    V + N L+ MY  C  +  AR +FD 
Sbjct: 141 YTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDT 200

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
              +D VSW +MI GY + GF  + + ++                               
Sbjct: 201 SPQRDLVSWTTMIQGYVKMGFAREGVGLYI------------------------------ 230

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
                 I  S   LD  + + L+  Y KC   N +++V  E+  KN V  N++ S L   
Sbjct: 231 ------IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQK 284

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               E+L ++R +     + +  T   VL +CA +  LE GK +H    + +   D F+ 
Sbjct: 285 GQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIG 344

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++DMY KCG+I+ A   F+ + R  +  + AM++G A HG   +  +LF++M K G++
Sbjct: 345 NALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIE 404

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           PDE+T++ VLT+C H GLV E R Y   MS ++ L PQLEHY C+VDLLGR GL+  A+ 
Sbjct: 405 PDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEE 464

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  MPI PDA +  +LL AC I+G ++LG     K+ +++P  +  YVL+SN+Y+SA  
Sbjct: 465 FIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANR 524

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           W D  KLRK MKE+ L K PG S I + G  H F  GD SH + KEIYK L ++  H+
Sbjct: 525 WRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHL 582



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 211/461 (45%), Gaps = 69/461 (14%)

Query: 1   QIYSLLIKNGHHLDPILS-TTLISHFTKFA---DFRRAFRFLFDTQNRDIITYNALISGL 56
           QI++ +IK     D  L+ +T +S     +   D R A   L   +  ++  YNA+I GL
Sbjct: 55  QIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGL 114

Query: 57  ARFCQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSR 112
           A     S   L ++ ++  +G+ PD +T   ++KAC    +++E E VHG  +K+G +S 
Sbjct: 115 ATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASD 174

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VY+ +  +  YA    I SA   F      D V++T M+ GYV  G   +   +++ +R+
Sbjct: 175 VYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYI-IRN 233

Query: 173 LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             + L+ F                                  + NA++++Y++CG    A
Sbjct: 234 SNVNLDVF----------------------------------VGNALVDMYLKCGDANFA 259

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            K+F E+   +VVSW+  I+         E+  +F+ ++    + ++ T++ +L+S    
Sbjct: 260 RKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANL 319

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            +L  GK + A+  +        IGNAL+ MY KCG ++ A  +F  +  KD  S+ +MI
Sbjct: 320 GVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMI 379

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG-- 407
            G + +G   +ALD+F  M +  + P+  T   +L A S           H  +++ G  
Sbjct: 380 VGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS-----------HVGLVEEGRK 428

Query: 408 FLLDDSMI----------SCLITTYGKCNALNESKRVLSEI 438
           +  D S I           C++   G+   +NE++  +  +
Sbjct: 429 YFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNM 469



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 7/192 (3%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKR----VLS 436
           S L  +   KS+K   Q+H+ IIK+     D+ ++        C  +L    R    +L+
Sbjct: 39  SFLSTLQTCKSIKGLKQIHASIIKT-MPSPDAQLTISTRLSALCAQSLPIDPRYALSLLA 97

Query: 437 EIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           ++   N    NA+   L  ++  + E L +Y+ +       +  T   VLKACA    + 
Sbjct: 98  QLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVR 157

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           +G+ +H  A+K     D++V + ++ MY  C  I  A++ F    +  L  W  M+ GY 
Sbjct: 158 EGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYV 217

Query: 556 QHGCYHEVSNLF 567
           + G   E   L+
Sbjct: 218 KMGFAREGVGLY 229


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 210/688 (30%), Positives = 339/688 (49%), Gaps = 34/688 (4%)

Query: 79  PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE-IVSAEMCFR 137
           P AFT +       +L     +HG+ +  G  +  ++ +     YAKS     SA   F 
Sbjct: 41  PAAFTAAVPSSVPANLPA---LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFH 97

Query: 138 DCLDLDNVAYTAMVCGYVWNGE-------FDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
                D  +Y  ++      GE         +S +V  +  +L + L   SL A  G + 
Sbjct: 98  TARARDVSSYNTILSALPDRGEALAFAAWMLRSGDVRPDAVTLTVAL---SLAASRGEAD 154

Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            V    Q+H    + G ++ V   + NA++  Y R      A ++FDE+   D+VSW+  
Sbjct: 155 GVWIVRQLHALASRSGLVADV--FVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAM 212

Query: 251 IAA-ACDG---VEAFGLFKDLRFND---FQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           I   A DG    E   +F  L  +     + +  ++ +++ + G E  +  G+Q+ +F  
Sbjct: 213 ICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTV 272

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+G    VSIGN L++MY K G    AR +   +  +D +SW + I+   E      A++
Sbjct: 273 KLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAISMDGEE----DAIE 328

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M +  + PN  T  +++ A++     +    +H+  +K+G   + +  + LIT Y 
Sbjct: 329 LFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYA 388

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           K   +++++ V   + +   +  NAL S         EAL+++  +   C   N +TF+ 
Sbjct: 389 KLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMV-RCLRPNETTFAS 447

Query: 484 VLKACAAM--TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           VL A  A+    +  G+  HC +LK       +V  A+IDMY K G++E++++AF     
Sbjct: 448 VLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVH 507

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
            SL  W A++  +A+HG Y  V NLF+ M   GV PD +  L+VLT+C H+G V   R  
Sbjct: 508 RSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREI 567

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M   H + P  EHYAC++D+LGR G LE A+  + QMP  P     QSLL AC I+G
Sbjct: 568 FDSMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHG 627

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N  +       L E +P     YVLLSN+YA  G W  V K+R+EM+EK + KE G+SW+
Sbjct: 628 NTSIAERVAGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFSWV 687

Query: 722 HVGG----YTHHFYAGDSSHSQSKEIYK 745
             G     + H F + D++H  ++EIY+
Sbjct: 688 DFGAGESLHLHKFSSDDTTHPCTEEIYR 715



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 265/553 (47%), Gaps = 31/553 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++ L I +G      ++ +L + + K A  F  A +     + RD+ +YN ++S L    
Sbjct: 59  LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALP--- 115

Query: 61  QSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSLQENEIV------HGVCLKLGFSSRV 113
             G AL      LR   +RPDA T +  +    S  E + V      H +  + G  + V
Sbjct: 116 DRGEALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVADV 175

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  +  Y++   + +A   F +    D V++ AM+CG   +G+   ++ + V +R L
Sbjct: 176 FVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDC-PTEVILVFLRLL 234

Query: 174 -----GLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
                 +  +  S+ +V+   G+   ++ G Q+H F VK+G    V   + N ++ +Y +
Sbjct: 235 KDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVS--IGNVLVAMYYK 292

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE-AFGLFKDLRFNDFQINEYTMINLLS 284
            G    A K+   + E DV+SW+  I  + DG E A  LF  +R +    NE T + L+S
Sbjct: 293 SGAAGCARKLLKSMDERDVISWTTAI--SMDGEEDAIELFNGMRQDGVPPNEVTFVALMS 350

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           ++      R G+ I   C K G  +  +  N+LI+MY K  +++DAR++FD +   + ++
Sbjct: 351 ALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIA 410

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM--QVHSH 402
           WN++I+GY++N   N+AL +F  M+   L PN  T AS+L AV+  +++  A     H  
Sbjct: 411 WNALISGYAQNELCNEALQVFSCMVR-CLRPNETTFASVLSAVTAVETVSMAYGEMYHCQ 469

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            +K G  + + +   LI  Y K  +L ES++       ++ +   A+ S       +   
Sbjct: 470 SLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGNYDTV 529

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
           + L+  +  S    +G     VL AC     +  G+ I   ++ A +  + + E  + VI
Sbjct: 530 MNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFD-SMPAEHHVEPWPEHYACVI 588

Query: 521 DMYCKCGTIEDAK 533
           DM  + G +E+A+
Sbjct: 589 DMLGRAGRLEEAE 601



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 245/513 (47%), Gaps = 46/513 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           Q+++L  ++G   D  +   L++ +++ A    A R   +   RD++++NA+I GLA+  
Sbjct: 161 QLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDG 220

Query: 59  FCQSGPALKLFDRLRYQG---LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSR 112
            C +   + +F RL   G   +RPD  +  S++ ACGS  + E+   VH   +KLG   +
Sbjct: 221 DCPT-EVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGK 279

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V + +  +  Y KSG    A    +   + D +++T  +     +GE D + E+F  MR 
Sbjct: 280 VSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS---MDGEED-AIELFNGMRQ 335

Query: 173 LGLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  NE +  A+   L A    + G+ IH   +K G          N+++ +Y +  + 
Sbjct: 336 DGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAA--ANSLITMYAKLRRM 393

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA  +FD +  P++++W+  I+         EA  +F  +     + NE T  ++LS+V
Sbjct: 394 DDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCM-VRCLRPNETTFASVLSAV 452

Query: 287 GG-ERILRA-GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
              E +  A G+       K+G      +  ALI MY K G + ++R  FD  + +  ++
Sbjct: 453 TAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIA 512

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W ++I+ ++++G ++  +++F  M+   + P+G  + S+L A  +S ++    ++   + 
Sbjct: 513 WTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMP 572

Query: 405 KSGFLLD-DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
               +       +C+I   G+   L E++ ++ ++    +V  +AL S+L          
Sbjct: 573 AEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSV--SALQSLL---------- 620

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
                  G+CR ++G+T SI  +    +T+ E 
Sbjct: 621 -------GACR-IHGNT-SIAERVAGILTETEP 644


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 184/556 (33%), Positives = 290/556 (52%), Gaps = 40/556 (7%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+  +   A++ D V A  ++  +       N Y+   LL S   
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +    G+QI A   K+G      +  +LISMY + G + DAR +FD             
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  +D VSWN+MI GY ENG + +AL++F  M+  ++ P+ 
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKS----GFLLDDSMISCLITTYGKCNALNESKR 433
            T+ S++ A + S S++   QVHS +       GF     +++ LI  Y KC  +  +  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           +   +  K+ V  N L     + + + EAL L++ +  S    N  T   VL ACA +  
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316

Query: 494 LEQGKAIHCLALKA--RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
           ++ G+ IH    K       +  + +++IDMY KCG IE A + F  +   SL+ WNAM+
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
            G+A HG  +   +LF++M    V+PD+IT++ +L++C H+GL+   R     M+  + L
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P+LEHY C++DLLG  GL + A+  I  MP+ PD  IW SLL AC  +GN++L      
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           KL++++P+N  +YVLLSN+YA+AG W DV ++R  +  K + K PG S I V    H F 
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFI 556

Query: 732 AGDSSHSQSKEIYKEL 747
            GD  H + +EIY  L
Sbjct: 557 IGDKLHPRRREIYHML 572



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 203/444 (45%), Gaps = 46/444 (10%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---S 93
           +F+T Q  +++ +N ++ G A       AL+++ R+   G  P++++F  L+K+C    +
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM--- 150
            +E   +H   LKLG     Y+ +  I  YA++G +  A   F      D V+ TA+   
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 151 ----------------------------VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
                                       + GYV NG ++++ E+F EM    +  +E +L
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 183 TAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFD 237
            +V+ A   S  ++ G Q+H +        G  + L   NA+++LY +CG    A  +F+
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            ++  DVVSW+  I          EA  LF+++  +    N+ T++++L +      +  
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDI 319

Query: 295 GKQIQAFCYK--VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
           G+ I  +  K   G     S+  +LI MY KCG +  A  +F+ ++++   SWN+MI G+
Sbjct: 320 GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF 379

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           + +G  N A D+F  M    + P+  T   +L A S+S  L    Q+   + +   L   
Sbjct: 380 AMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPK 439

Query: 413 -SMISCLITTYGKCNALNESKRVL 435
                C+I   G      E++ ++
Sbjct: 440 LEHYGCMIDLLGHSGLFKEAEEMI 463



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 45/397 (11%)

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGV 203
           +  M+ G+  + +   + E++V M SLG   N +S   +L +   S   +EG QIH   +
Sbjct: 32  WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD-------------------------- 237
           K+G   G+  +++ +++++Y R G   DA K+FD                          
Sbjct: 92  KLG--CGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSA 149

Query: 238 -----EITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
                EITE DVVSW+  I    +     EA  LFK++   + + +E T+++++S+    
Sbjct: 150 RKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQS 209

Query: 290 RILRAGKQIQAFCYKV----GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
             +  G+Q+ ++        GF   + I NALI +Y KCG V  A  +F+ L  KD VSW
Sbjct: 210 GSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSW 269

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N++I GY+    + +AL +F  ML     PN  T+ S+L A ++  ++     +H +I K
Sbjct: 270 NTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDK 329

Query: 406 --SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
              G   + S+ + LI  Y KC  +  + +V + +  ++    NA+            A 
Sbjct: 330 KLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAF 389

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +L+  + G+  E +  TF  +L AC+    L+ G+ I
Sbjct: 390 DLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 188/418 (44%), Gaps = 39/418 (9%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H D +  T LI+ +    DFR A +   +   RD++++NA+I+G     +   AL+LF  
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186

Query: 72  LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL----GFSSRVYLVSGFIENYA 124
           +    +RPD  T  S+V AC   GS++    VH          GFSS + +V+  I+ Y+
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K G++ +A   F      D V++  ++ GY     + ++  +F EM   G   N+ +L +
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306

Query: 185 VLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLDAVKMFD 237
           VL A     + D+  G  IH +  K   L GV N   L  +++++Y +CG    A ++F+
Sbjct: 307 VLPACAHLGAIDI--GRWIHVYIDKK--LKGVTNETSLRTSLIDMYAKCGDIEAAHQVFN 362

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +    + SW+  I   A       AF LF  +R N  + ++ T + LLS+     +L  
Sbjct: 363 SMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDL 422

Query: 295 GKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGY 352
           G+QI ++          +     +I + G  G   +A  +   +  + D V W S++   
Sbjct: 423 GRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKAC 482

Query: 353 SENGFFNQALDMFCHML---------EFSLIPNGYTMASILEAVS------NSKSLKQ 395
            ++G    A + F   L          + L+ N Y  A   E V+      N K +K+
Sbjct: 483 KKHGNLELA-ESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKK 539


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 182/537 (33%), Positives = 301/537 (56%), Gaps = 11/537 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N ++N Y +      A ++FDEI +PD+VS++  IAA  D  E   A  LF ++R   F 
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T+  ++ + G +  L   +Q+  F    G+    S+ NA+++ Y + G +N+AR +
Sbjct: 139 LDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRV 196

Query: 334 FDYLIF---KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           F  +     +D VSWN+MI    ++    +A+++F  M+   L  + +TMAS+L A +  
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKRVLSEIDKKNAVHINAL 449
           K L   MQ H  +IKSGF  +  + S LI  Y KC   + E ++V  EI   + V  N +
Sbjct: 257 KDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTM 316

Query: 450 ASVLV-YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            S    Y     + +  +R +  +    +  +F  V  AC+ ++    GK +H LA+K+ 
Sbjct: 317 ISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSD 376

Query: 509 YDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
              + + V +A++ MY KCG + DA+R F  +   ++   N+M+ GYAQHG   E   LF
Sbjct: 377 IPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLF 436

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M +  + P+ IT++AVL++C H G V E + Y + M +   + P+ EHY+C++DLLGR
Sbjct: 437 ELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGR 496

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L+ A+  I+ MP  P +  W +LL AC  +GN++L + A ++ L+L+P N + YV+L
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVML 556

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           SN+YASA  W +   +++ M+E+ + K+PG SWI +    H F A D+SH   KEI+
Sbjct: 557 SNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIH 613



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 228/438 (52%), Gaps = 24/438 (5%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            TLI+ + K +    A +   +    DI++YN LI+  A   +  PAL+LF  +R     
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 79  PDAFTFSSLVKACG-SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            D FT S ++ ACG  +     +H   +  G+     + +  +  Y++ G +  A   FR
Sbjct: 139 LDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFR 198

Query: 138 DCLD---LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
           +  +    D V++ AM+     + E  ++ E+F EM   GL+++ F++ +VL A   VK+
Sbjct: 199 EMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKD 258

Query: 195 ---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC-GQKLDAVKMFDEITEPDVVSWSER 250
              G Q HG  +K GF     +H+ + +++LY +C G  ++  K+F+EI  PD+V W+  
Sbjct: 259 LVGGMQFHGMMIKSGFHGN--SHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTM 316

Query: 251 IAA-------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           I+        + DG+     F++++ N F  ++ + + + S+         GKQ+ A   
Sbjct: 317 ISGFSQYEDLSEDGI---WCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAI 373

Query: 304 KVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
           K       VS+ NAL++MY KCG V+DAR +FD +   + VS NSMIAGY+++G   ++L
Sbjct: 374 KSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESL 433

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLIT 420
            +F  ML+  + PN  T  ++L A  ++  +++  Q + +++K  F ++      SC+I 
Sbjct: 434 RLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEAEHYSCMID 492

Query: 421 TYGKCNALNESKRVLSEI 438
             G+   L E++R++  +
Sbjct: 493 LLGRAGKLKEAERIIETM 510



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 232/509 (45%), Gaps = 21/509 (4%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           F+ L   CGSL   +        L     V+  +  I  YAK   I  A   F +    D
Sbjct: 50  FTLLYSKCGSLHNAQ----TSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPD 105

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFDVKEGEQIHGFG 202
            V+Y  ++  Y   GE   +  +F E+R L   L+ F+L+ V+ A   DV    Q+H F 
Sbjct: 106 IVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFV 165

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE---PDVVSWSERIAAAC---D 256
           V  G+       +NNA++  Y R G   +A ++F E+ E    D VSW+  I A     +
Sbjct: 166 VVCGY--DCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHRE 223

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
           G+EA  LF+++     +++ +TM ++L++    + L  G Q      K GF     +G+ 
Sbjct: 224 GLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSG 283

Query: 317 LISMYGKC-GQVNDARSIFDYLIFKDSVSWNSMIAGYSE-NGFFNQALDMFCHMLEFSLI 374
           LI +Y KC G + + R +F+ +   D V WN+MI+G+S+        +  F  M      
Sbjct: 284 LIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFH 343

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYGKCNALNESKR 433
           P+  +   +  A SN  S     QVH+  IKS    +  S+ + L+  Y KC  +++++R
Sbjct: 344 PDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARR 403

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V   + + N V +N++ +         E+L L+  +       N  TF  VL AC     
Sbjct: 404 VFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGK 463

Query: 494 LEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMM 551
           +E+G K  + +  + R + +    S +ID+  + G +++A+R    +  +  +  W  ++
Sbjct: 464 VEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523

Query: 552 MGYAQHGCYH---EVSNLFNKMSKFGVKP 577
               +HG      + +N F ++  +   P
Sbjct: 524 GACRKHGNVELAVKAANEFLQLEPYNAAP 552



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 216/489 (44%), Gaps = 64/489 (13%)

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND-- 329
           F +   T  NLL +   +R L  GK + A  +K        + N    +Y KCG +++  
Sbjct: 5   FPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64

Query: 330 -----------------------------ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
                                        AR +FD +   D VS+N++IA Y++ G    
Sbjct: 65  TSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRP 124

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           AL +F  + E     +G+T++ ++ A  +   L +  Q+H  ++  G+    S+ + ++ 
Sbjct: 125 ALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVR--QLHCFVVVCGYDCYASVNNAVLA 182

Query: 421 TYGKCNALNESKRVLSEIDK---KNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
            Y +   LNE++RV  E+ +   ++ V  NA+           EA+EL+R +     +V+
Sbjct: 183 CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAF 536
             T + VL A   + DL  G   H + +K+ +  +  V S +ID+Y KC G + + ++ F
Sbjct: 243 MFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSN----LFNKMSKFGVKPDEITYLAVLTSCCH- 591
            +I    L  WN M+ G++Q   Y ++S      F +M   G  PD+ +++ V ++C + 
Sbjct: 303 EEIAAPDLVLWNTMISGFSQ---YEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNL 359

Query: 592 -AGLVREARTYLSCMSDLHGLIP--QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
            +  V +    L+  SD    IP  ++     +V +  + G +  A+   D MP     H
Sbjct: 360 SSPSVGKQVHALAIKSD----IPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP----EH 411

Query: 649 IWQSLLSACTIYGNIDLGLLAGS-KLLE--LQPD---NESTYVLLSNLYASAGMWNDVGK 702
              SL S   I G    G+   S +L E  LQ D   N  T++ + +     G   +  K
Sbjct: 412 NMVSLNS--MIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK 469

Query: 703 LRKEMKEKF 711
               MKE+F
Sbjct: 470 YFNMMKERF 478



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARF 59
           Q + ++IK+G H +  + + LI  ++K A      R +F +    D++ +N +ISG +++
Sbjct: 264 QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQY 323

Query: 60  CQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVY 114
              S   +  F  +++ G  PD  +F  +  AC +L    +   VH + +K     +RV 
Sbjct: 324 EDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVS 383

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y+K G +  A   F    + + V+  +M+ GY  +G   +S  +F  M    
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKD 443

Query: 175 LELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  +  AVL A   +  V+EG++      +   +     H  + +++L  R G+  +
Sbjct: 444 IAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHY-SCMIDLLGRAGKLKE 502

Query: 232 AVKMFDEIT-EPDVVSWSERIAA 253
           A ++ + +   P  + W+  + A
Sbjct: 503 AERIIETMPFNPGSIEWATLLGA 525


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 230/775 (29%), Positives = 366/775 (47%), Gaps = 84/775 (10%)

Query: 58  RFCQSGPALK----LFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFS 110
           R C S  AL     L  RL   GL    F  ++L+ A   CG+L +   +    +K    
Sbjct: 12  RSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIK---E 68

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             V   +  +  YAK G +  AE  F      D  ++  ++ GY     F    E FV M
Sbjct: 69  PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128

Query: 171 RSLGLEL-NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
              G  L N F+   V+   GA    +   Q+ G   K  F       +  A+++++VRC
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGD--PDVETALVDMFVRC 186

Query: 227 G---------------------------QKL----DAVKMFDEITEPDVVSWSERIAAAC 255
           G                            KL     A++ F+++ E DVVSW+  IAA  
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 256 DG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 EA GL  ++     +++  T  + L++      L  GKQ+ A   +        
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + +ALI +Y KCG   +A+ +F+ L  ++SVSW  +I G  +   F++++++F  M    
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           +  + + +A+++    N   L    Q+HS  +KSG      + + LI+ Y KC  L  ++
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 433 RVLSEI-------------------------------DKKNAVHINALASVLVYASCHAE 461
            V S +                               D +NA+  NA+    +      +
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEED 486

Query: 462 ALELYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            L++Y  +  S ++V     T+  + + CA +   + G  I    +KA    ++ V +A 
Sbjct: 487 GLKMYSAML-SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA 545

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           I MY KCG I +A++ F  +    +  WNAM+ GY+QHG   + +  F+ M   G KPD 
Sbjct: 546 ITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 605

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           I+Y+AVL+ C H+GLV+E + Y   M+ +HG+ P LEH++C+VDLLGR G L  AK  ID
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID 665

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +MP+ P A +W +LLSAC I+GN +L  LA   + EL   +  +Y+LL+ +Y+ AG  +D
Sbjct: 666 KMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDD 725

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             ++RK M++K + K PGYSW+ V    H F A D SH Q   I  +L +L E +
Sbjct: 726 SAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKI 780



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 52/474 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++++ + K      A  +  D   RD++++N +I+ L++  +   AL L   +  +G+R
Sbjct: 208 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267

Query: 79  PDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D+ T++S + AC    SL   + +H   ++       Y+ S  IE YAK G    A+  
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F    D ++V++T ++ G +    F KS E+F +MR+  + +++F+L  ++   F   D+
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G Q+H   +K G    +   ++N++++LY +CG   +A  +F  ++E D+VSW+  I 
Sbjct: 388 CLGRQLHSLCLKSGHNRAIV--VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 253 AAC------------DGVEA---------------FGLFKD--------LRFNDFQINEY 277
           A              DG++                 G  +D        L   D   +  
Sbjct: 446 AYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T + L          + G QI     K G +  VS+ NA I+MY KCG++++A+ +FD L
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA- 396
             KD VSWN+MI GYS++G   QA   F  ML     P+  +  ++L   S+S  +++  
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 397 ----MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
               M    H I  G        SC++   G+   L E+K ++ ++  K    +
Sbjct: 626 LYFDMMTRVHGISPGL----EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEV 675



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 181/394 (45%), Gaps = 45/394 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I++   +DP +++ LI  + K   F+ A R     Q+R+ +++  LI G  ++ 
Sbjct: 291 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 350

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               +++LF+++R + +  D F  ++L+  C +  +      +H +CLK G +  + + +
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 410

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---- 173
             I  YAK G++ +AE  F    + D V++T+M+  Y   G   K++E F  M +     
Sbjct: 411 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAIT 470

Query: 174 -----------GLELNEFSLTAVLGASFDV--------------------KEGEQIHGFG 202
                      G E +   + + + +  DV                    K G+QI G  
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVE 259
           VK G +  V   + NA + +Y +CG+  +A K+FD +   DVVSW+  I        G +
Sbjct: 531 VKAGLILNVS--VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNALI 318
           A   F D+     + +  + + +LS      +++ GK       +V G    +   + ++
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
            + G+ G + +A+ + D +  K +   W ++++ 
Sbjct: 649 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 181/456 (39%), Gaps = 78/456 (17%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR------ 331
            + + L S G    L   + +      VG    V + N L+  Y  CG ++DAR      
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 332 --------------------------SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                                      +FD +  +D  SWN++++GY +   F   L+ F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 366 CHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
             M      +PN +T   ++++       + A Q+     K  F  D  + + L+  + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 425 CNALNESKRVLSEIDK-------------------------------KNAVHINALASVL 453
           C  ++ + R+ S+I++                               ++ V  N + + L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +    EAL L   +      ++ +T++  L ACA +  L  GK +H   +++    D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V SA+I++Y KCG+ ++AKR F  +   +   W  ++ G  Q+ C+ +   LFN+M   
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV------DLLGR 627
            +  D+     +++ C +       R  L     LH L  +  H   IV       L  +
Sbjct: 366 LMAIDQFALATLISGCFN-------RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK 418

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            G L+ A+     M    D   W S+++A +  GNI
Sbjct: 419 CGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGNI 453


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 175/549 (31%), Positives = 295/549 (53%), Gaps = 36/549 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I EP+++ W+      A + D V A  L+  +       N YT   LL S   
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI--------------- 333
            ++ + G+QI     K+G+   + +  +LISMY K G+  DA  +               
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175

Query: 334 ----------------FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                           FD +  KD VSWN++I+GY++ G   +ALD+F  M++ ++ P+ 
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM +++ A + S S++   QVHS I   G   +  +++ LI  Y KC  +  +  +   
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N +     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355

Query: 498 KAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
           + IH    K          + +++IDMY KCG IE A + F  +   +L+  NAM+ G+A
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG  +   ++F++M K G++PD+IT++ +L++C H+G++   R     M+  + + P+L
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKL 475

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY C++DLLG +GL + A+  I+ M + PD  IW SLL AC ++GN++LG     KL++
Sbjct: 476 EHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIK 535

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           ++P+N  +YVLLSN+YA+AG WN+V  +R  + +K + K PG S I +    H F  GD 
Sbjct: 536 IEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 595

Query: 736 SHSQSKEIY 744
            H +++EIY
Sbjct: 596 FHPRNREIY 604



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 212/457 (46%), Gaps = 44/457 (9%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
           SL+  C +LQ   I+H   +K G  +  Y +S  +E    S     +  A   F    + 
Sbjct: 7   SLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEP 66

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIH 199
           + + +  M  G+  + +   + +++V M SLGL  N ++   +L +   +K   EG+QIH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIH 126

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA--------------------------- 232
           G  +K+G+   +  +++ +++++YV+ G+  DA                           
Sbjct: 127 GHVLKLGYELDL--YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184

Query: 233 ----VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
                KMFDEI   DVVSW+  I+   D     EA  LFK++   + + +E TM+ ++S+
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 ++ G+Q+ ++    G    + I NALI +Y KCG+V  A  +F  L  KD +SW
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N+MI GY+    + +AL +F  ML     PN  TM SIL A +   ++     +H +I K
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364

Query: 406 --SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
              G     S+ + LI  Y KC  +  + +V + +  +     NA+            A 
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAF 424

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           +++  +  +  E +  TF  +L AC+    L+ G+ I
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 202/445 (45%), Gaps = 51/445 (11%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  +L   ++S    F     A       Q  +++ +N +  G 
Sbjct: 21  IHAQMIKTGLHNTNYALSRLLEFCILS--PNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRV 113
           A       A+KL+  +   GL P+++TF  L+K+C  L+   E + +HG  LKLG+   +
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           Y+ +  I  Y K+G    A   F      D V+YTA++ GY                   
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G   ++ ++F EM    ++ +E ++  V+ A   S  ++ G Q+H
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD--- 256
            +    G  S +   + NA+++LY +CG+   A  +F  ++  DV+SW+  I        
Sbjct: 259 SWIDDHGLGSNL--KIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNL 316

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K   G     S+ 
Sbjct: 317 YKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLR 376

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A  +F+ +  +   + N+MI G++ +G  N A D+F  M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 375 PNGYTMASILEAVSNSKSLKQAMQV 399
           P+  T   +L A S+S  L    ++
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRI 461



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 178/408 (43%), Gaps = 62/408 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITY----------- 49
           QI+  ++K G+ LD  + T+LIS + K   ++ A +    + +RD+++Y           
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183

Query: 50  --------------------NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK 89
                               NA+ISG A    +  AL LF  +    ++PD  T  ++V 
Sbjct: 184 YIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVS 243

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC   GS+Q    VH      G  S + +V+  I+ Y+K GE+ +A   F+   + D ++
Sbjct: 244 ACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS 303

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGV 203
           +  M+ GY     + ++  +F EM   G   N+ ++ ++L A      +  G  IH +  
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYID 363

Query: 204 KVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV--- 258
           K   + GV N   L  +++++Y +CG    A ++F+        S   R  +AC+ +   
Sbjct: 364 KR--IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN--------SMHHRTLSACNAMIFG 413

Query: 259 --------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFME 309
                    AF +F  +R N  + ++ T + LLS+     +L  G++I ++         
Sbjct: 414 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITP 473

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
            +     +I + G  G   +A  + + +  + D V W S++     +G
Sbjct: 474 KLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHG 521



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 39/287 (13%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-----CLITTYGKCNALNESKRVLSEI 438
           L  + N K+L+    +H+ +IK+G    +  +S     C+++     + L  +  V   I
Sbjct: 6   LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSP--NFDGLPYAISVFETI 63

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            + N +  N +      +S    A++LY  +       N  TF  +LK+CA +   ++G+
Sbjct: 64  QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGT------------------------------ 528
            IH   LK  Y+ D++V +++I MY K G                               
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183

Query: 529 -IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            IE A++ F +I    +  WNA++ GYA  G   E  +LF +M K  VKPDE T + V++
Sbjct: 184 YIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVS 243

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           +C  +G ++  R   S + D HGL   L+    ++DL  + G +E A
Sbjct: 244 ACAQSGSIQLGRQVHSWIDD-HGLGSNLKIVNALIDLYSKCGEVETA 289


>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
 gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
          Length = 583

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 175/488 (35%), Positives = 271/488 (55%), Gaps = 4/488 (0%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  +++ +  + F  + +T   LL +       R G+Q+     K+G +    + N+LI 
Sbjct: 89  AVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIR 148

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
            YG CG  + A  +FD ++ +D VSWNS+I+G+ + G F++A+ +F  M    + P+  T
Sbjct: 149 CYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRM---DVEPSMTT 205

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           + S+L A + +  L     +H  +I+  F ++  + + ++  Y K     E+K +  E+ 
Sbjct: 206 LVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELP 264

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
            ++ V    + + LV +    ++LEL+  +       +    + VL ACA++  L+ G  
Sbjct: 265 TRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTW 324

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H    +     DI + +A++DMY KCG IE A + F  + + +   WNA++ G A HG 
Sbjct: 325 VHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGL 384

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA 619
            HE  NLF  M   GVKP+EIT+LA+LT+CCH GLV E R Y   MS L+ L+P+LEHY 
Sbjct: 385 VHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYG 444

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           C++DL  R GLLE A      MP+ PD  IW  LL+ACT  GNI+L       +LEL  D
Sbjct: 445 CMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQDYILELDHD 504

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
           +   +VLLSN+ A    W++V +LR+ MK++ + K PG S I V G  H F  GD SH Q
Sbjct: 505 DSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEFVVGDISHLQ 564

Query: 740 SKEIYKEL 747
           ++EIYK L
Sbjct: 565 TEEIYKVL 572



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 220/464 (47%), Gaps = 24/464 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADF-RRAFRFLFDTQNR-DIITYNALISGLAR 58
           QI++ L+ +G   D  +++ ++  F  F ++   A  +L     R     +N+LI+G   
Sbjct: 23  QIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGSFPFNSLINGYVG 82

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYL 115
                 A+ ++ R+   G  PD FTF  L+KAC +    +E   VHGV +KLG  +  Y+
Sbjct: 83  GEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYV 142

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I  Y   G+   A   F + L  D V++ +++ G++  G FD++  VF  M    +
Sbjct: 143 QNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFRM---DV 199

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGF---GVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           E +  +L +VL A   + D+  G+ IHG      KV  + G      NA++++YV+ G  
Sbjct: 200 EPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG------NAMLDMYVKNGCF 253

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            +A  +FDE+   D+VSW+  I          ++  LF  +R      +   + ++LS+ 
Sbjct: 254 YEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSAC 313

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G  +  +  + G    + IG A++ MY KCG +  A  IF  +  +++ +WN
Sbjct: 314 ASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWN 373

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +++ G + +G  ++AL++F  M+   + PN  T  +IL A  +   + +  +   ++ K 
Sbjct: 374 ALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKL 433

Query: 407 GFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
             LL       C+I  + +   L E+  +   +  K  V I  L
Sbjct: 434 YNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGL 477



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 6/320 (1%)

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
           S  +NS+I GY    F   A+ ++  M+    +P+ +T   +L+A SN    ++  QVH 
Sbjct: 70  SFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHG 129

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
            ++K G L D  + + LI  YG C   + + +V  E+  ++ V  N+L S  + A    E
Sbjct: 130 VVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDE 189

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           A+ ++  +     E + +T   VL ACA   DL  GK IH + ++ R+  ++ + +A++D
Sbjct: 190 AISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGV-IERRFKVNLVLGNAMLD 245

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY K G   +AK  F ++    +  W  M+ G  Q     +   LF+ M   G+ PD I 
Sbjct: 246 MYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAII 305

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
             +VL++C   G + +  T++    +  G+   +     IVD+  + G +E A      M
Sbjct: 306 LTSVLSACASLGTL-DFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSM 364

Query: 642 PIPPDAHIWQSLLSACTIYG 661
               +   W +LL    ++G
Sbjct: 365 S-QRNTFTWNALLCGLAMHG 383


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 165/466 (35%), Positives = 260/466 (55%), Gaps = 1/466 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +L+++    R L   + I A      F   V + N+LI +Y KCG V DAR +FD +  +
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D  SW S+IAGY++N   ++AL +   ML     PNG+T AS+L+A   S S     Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  +K  +  D  + S L+  Y +C  ++ +  V  +++ KN V  NAL +         
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
             L ++  +  +  E    T+S V  A A +  LEQGK +H   +K+      FV + ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY K G++ DA++ F ++ +  +  WN+M+  +AQ+G   E    F +M K GV  ++I
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+L++LT+C H GLV+E + Y   M + + L P+++HY  +VDLLGR GLL  A + I +
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP+ P A +W +LL +C ++ N  +G  A   + EL PD+    VLL N+YAS G W+  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
            ++RK MK   + KEP  SW+ +    H F A D +H +S+EIYK+
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKK 533



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND 271
           L+N++++LY +CG   DA ++FD +   D+ SW+  IA         EA GL   +    
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR 160

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+ N +T  +LL + G       G+QI A   K  + + V +G+AL+ MY +CG+++ A 
Sbjct: 161 FKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAI 220

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           ++FD L  K+ VSWN++IAG++  G     L MF  M         +T +S+  A++   
Sbjct: 221 AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 280

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L+Q   VH+H+IKSG  L   + + ++  Y K  ++ ++++V   +DKK+ V  N++ +
Sbjct: 281 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT 340

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    EA+  +  +      +N  TF  +L AC+    +++GK    +  +   + 
Sbjct: 341 AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEP 400

Query: 512 DIFVESAVIDMYCKCGTIEDAKR-AFRKICRDSLAGWNAMM 551
           +I     V+D+  + G + DA    F+   + + A W A++
Sbjct: 401 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 159/324 (49%), Gaps = 11/324 (3%)

Query: 84  FSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           + SL+ AC    SL +   +H       F+  V+L +  I  Y K G +  A   F    
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQ 197
             D  ++T+++ GY  N   D++  +   M     + N F+  ++L   GAS     GEQ
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-- 255
           IH   VK  +   V  ++ +A++++Y RCG+   A+ +FD++   + VSW+  IA     
Sbjct: 187 IHALTVKYDWHDDV--YVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244

Query: 256 -DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            DG     +F +++ N F+   +T  ++ S++ G   L  GK + A   K G      +G
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N ++ MY K G + DAR +FD +  KD V+WNSM+  +++ G   +A+  F  M +  + 
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364

Query: 375 PNGYTMASILEAVSNSKSLKQAMQ 398
            N  T  SIL A S+   +K+  Q
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQ 388



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 170/346 (49%), Gaps = 18/346 (5%)

Query: 17  LSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           L  +LI  + K    AD RR F  +     RD+ ++ +LI+G A+      AL L   + 
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGM---PARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157

Query: 74  YQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
               +P+ FTF+SL+KA G+   +   E +H + +K  +   VY+ S  ++ YA+ G + 
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F      + V++ A++ G+   G+ + +  +F EM+  G E   F+ ++V  A  
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277

Query: 191 DV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            +   ++G+ +H   +K G    +   + N I+++Y + G  +DA K+FD + + DVV+W
Sbjct: 278 GIGALEQGKWVHAHMIKSG--ERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  + A      G EA   F+++R     +N+ T +++L++     +++ GKQ      +
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMI 349
                 +     ++ + G+ G +NDA   IF   +   +  W +++
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 9/254 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K   H D  + + L+  + +      A       ++++ +++NALI+G AR  
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
                L +F  ++  G     FT+SS+  A    G+L++ + VH   +K G     ++ +
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG ++ A   F      D V + +M+  +   G   ++   F EMR  G+ L
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA-V 233
           N+ +  ++L A      VKEG+Q      +      + +++   +++L  R G   DA V
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVT--VVDLLGRAGLLNDALV 423

Query: 234 KMFDEITEPDVVSW 247
            +F    +P    W
Sbjct: 424 FIFKMPMKPTAAVW 437


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 179/535 (33%), Positives = 280/535 (52%), Gaps = 40/535 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDF 272
           NA+++ Y + G   +    FD +   D VS++  IA     +C   E+  LFK ++   F
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ-ESLELFKRMQREGF 151

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +  EYT++++L++      LR GKQI        F+  V I NAL  MY KCG++  AR 
Sbjct: 152 EPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARW 211

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +FD L  K+ VSWN MI+GY++NG   + + +   M     +P+  TM++I         
Sbjct: 212 LFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI--------- 262

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
                                     I  Y +C  ++E++RV SE  +K+ V   A+   
Sbjct: 263 --------------------------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
                   +AL L+  +     E +  T S V+ +CA +  L  G+A+H  ++ A  + +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
           + V SA+IDMY KCG I+DA+  F  +   ++  WNAM++G AQ+G   +   LF  M +
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ 416

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
              KPD +T++ +L++C H   + + + Y   +S+ HG+ P L+HYAC+V+LLGR G +E
Sbjct: 417 QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIE 476

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   I  M   PD  IW +LLS C+  G+I    +A   L EL P     Y++LSN+YA
Sbjct: 477 QAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYA 536

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           S G W DV  +R  MK K + K  G+SWI +    H F + D +H +S++IY++L
Sbjct: 537 SMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKL 591



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 208/463 (44%), Gaps = 79/463 (17%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVH 101
           Q  D   +N L+   A+F +   A  LFD++    L+ D F++++L+ A           
Sbjct: 54  QPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM----LKRDXFSWNALLSA----------- 98

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
                                YAKSG I + +  F      D+V+Y   + G+  N    
Sbjct: 99  ---------------------YAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ 137

Query: 162 KSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           +S E+F  M+  G E  E+++ ++L AS    D++ G+QIHG  +   FL  V   + NA
Sbjct: 138 ESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNV--FIWNA 195

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQIN 275
           + ++Y +CG+   A  +FD +T+ ++VSW+  I+      +     GL   +R +    +
Sbjct: 196 LTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           + TM                                   + +I+ Y +CG+V++AR +F 
Sbjct: 256 QVTM-----------------------------------STIIAAYCQCGRVDEARRVFS 280

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
               KD V W +M+ GY++NG    AL +F  ML   + P+ YT++S++ + +   SL  
Sbjct: 281 EFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH 340

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
              VH   I +G   +  + S LI  Y KC  +++++ V + +  +N V  NA+      
Sbjct: 341 GQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQ 400

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                +ALEL+  +     + +  TF  +L AC     +EQG+
Sbjct: 401 NGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 186/396 (46%), Gaps = 43/396 (10%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIV 100
           RD ++YN  I+G +       +L+LF R++ +G  P  +T  S++ A   L +    + +
Sbjct: 118 RDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQI 177

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGE 159
           HG  +   F   V++ +   + YAK GEI  A   F DCL   N V++  M+ GY  NG+
Sbjct: 178 HGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLF-DCLTKKNLVSWNLMISGYAKNGQ 236

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI 219
            +K   +  +MR  G   ++ +++ ++ A                               
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------------- 265

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINE 276
              Y +CG+  +A ++F E  E D+V W+  +   A +G E  A  LF ++     + + 
Sbjct: 266 ---YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           YT+ +++SS      L  G+ +       G    + + +ALI MY KCG ++DARS+F+ 
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  ++ VSWN+MI G ++NG    AL++F +ML+    P+  T   IL A  +   ++Q 
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG 442

Query: 397 MQVHSHII-KSGFLLDDSMISCLITTYGKCNALNES 431
            +    I  + G        +C++   G+   + ++
Sbjct: 443 QEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQA 478



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 185/454 (40%), Gaps = 49/454 (10%)

Query: 9   NGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKL 68
           +GH  D +  +T+I+ + +      A R   + + +DI+ + A++ G A+  +   AL L
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309

Query: 69  FDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           F+ +  + + PD++T SS+V +C    SL   + VHG  +  G ++ + + S  I+ Y+K
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G I  A   F      + V++ AM+ G   NG    + E+F  M     + +  +   +
Sbjct: 370 CGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGI 429

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEIT-EP 242
           L A       EQ   +   +    G+   L++   ++NL  R G+   AV +   +  +P
Sbjct: 430 LSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDP 489

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--------NEYTMINLLSSVGGERI 291
           D + WS  +   +   D V A    + L   D  I        N Y  +     V   R 
Sbjct: 490 DFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRN 549

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   K ++ F    GF   + I N +     +     ++  I++ L        N +I  
Sbjct: 550 LMKSKNVKKF---AGF-SWIEIDNEVHRFTSEDRTHPESEDIYEKL--------NMLIGK 597

Query: 352 YSENGFF------------NQALDMFCH-----MLEFSLI--PNGYTMASILEAVSNSKS 392
             E GF             ++     C       L F LI  PNG +   I++ +     
Sbjct: 598 LQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICND 657

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
             + M+  S II    +L DS      +T GKC+
Sbjct: 658 CHEFMKFASRIIGRQIILRDSNRFHHFST-GKCS 690



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 167/367 (45%), Gaps = 48/367 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           QI+  +I      +  +   L   + K  +  +A R+LFD    ++++++N +ISG A+ 
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA-RWLFDCLTKKNLVSWNLMISGYAKN 234

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
            Q    + L  ++R  G  PD  T S+++ A                             
Sbjct: 235 GQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----------------------------- 265

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
              Y + G +  A   F +  + D V +TAM+ GY  NG  + +  +F EM    +E + 
Sbjct: 266 ---YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322

Query: 180 FSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKLDAVK 234
           ++L++V+ +      +  G+ +HG  +    L+G+ N+L  ++A++++Y +CG   DA  
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSI----LAGLNNNLLVSSALIDMYSKCGFIDDARS 378

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ +   +VVSW+  I          +A  LF+++    F+ +  T I +LS+      
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMI 349
           +  G++   +   + G    +     ++++ G+ G++  A ++   +    D + W++++
Sbjct: 439 IEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498

Query: 350 AGYSENG 356
           +  S  G
Sbjct: 499 SICSTKG 505



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/232 (19%), Positives = 92/232 (39%), Gaps = 36/232 (15%)

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG------------- 558
           D F+ + ++ +Y K G + DA+  F K+ +     WNA++  YA+ G             
Sbjct: 57  DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 559 ------------------CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
                             C  E   LF +M + G +P E T +++L +      +R  + 
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
               +  +   +  +  +  + D+  + G +E A+   D +    +   W  ++S     
Sbjct: 177 IHGSII-VRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKN 234

Query: 661 GNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           G  +  +GLL   +L    PD  +   +++  Y   G  ++  ++  E KEK
Sbjct: 235 GQPEKCIGLLHQMRLSGHMPDQVTMSTIIA-AYCQCGRVDEARRVFSEFKEK 285


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 197/610 (32%), Positives = 312/610 (51%), Gaps = 15/610 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++   KSG +  A   F      + VA+T  + G   NG  + +  +F +M   G+  N+
Sbjct: 77  LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136

Query: 180 FSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+  A L A          EQ+H   V+ GF +     + + ++ LY RCG    A ++F
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAW--IGSCLIELYSRCGSLRAAEEVF 194

Query: 237 DEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
             +  PDVV ++  ++A C   E   A  +   +     Q NE+TM ++L+    E    
Sbjct: 195 RRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLA----ECPRG 250

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+QI  +  KV   + V    ALI  Y + G    A+++F+ L  K+ VSW SM+    
Sbjct: 251 IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCI 310

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +G  + AL +F  M+   + PN +  +  L A     S+    Q+H   IK   + D  
Sbjct: 311 RDGRLDDALRVFSEMISEGVQPNEFAFSIALSACG---SVCLGRQIHCSAIKRDLMTDIR 367

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L++ YG+   ++E + VL +I+  + V   A  S         +A+ L   +    
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              N   FS  L +CA +  L QG+ +HCLALK   D  +   +A+I+MY KCG I  A+
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSAR 487

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            AF  +    +  WN+++ G AQHG  +     F++M     +PD+ T+L+VL  C HAG
Sbjct: 488 LAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAG 547

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV+E  T+   M+D +GL P   HYAC++D+LGR G    A   I+ MP  PD  IW++L
Sbjct: 548 LVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTL 607

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L++C ++ N+D+G LA  KL+EL   + ++YVL+SNLYA    W D  ++R+ M E  + 
Sbjct: 608 LASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVK 667

Query: 714 KEPGYSWIHV 723
           K+ G+SWI V
Sbjct: 668 KDAGWSWIEV 677



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 222/444 (50%), Gaps = 11/444 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + + LI  +++    R A       +  D++ Y +L+S L R  
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   A+ +  ++  QGL+P+  T +S++  C      E +HG  LK+  S  VY  +  I
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAEC-PRGIGEQIHGYMLKVMGSQSVYASTALI 275

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + Y++ G+  +A+  F +    + V++ +M+   + +G  D +  VF EM S G++ NEF
Sbjct: 276 DFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEF 335

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG--QKLDAVKMFDE 238
           + +  L A   V  G QIH   +K   ++ +   ++NA++++Y R G   +L+AV    +
Sbjct: 336 AFSIALSACGSVCLGRQIHCSAIKRDLMTDI--RVSNALLSMYGRSGFVSELEAV--LGK 391

Query: 239 ITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I  PD+VSW+  I+A        +A  L   +    F  N+Y   + LSS     +L  G
Sbjct: 392 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQG 451

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +Q+     K+G    V  GNALI+MY KCG++  AR  FD +   D +SWNS+I G +++
Sbjct: 452 RQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQH 511

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSM 414
           G  N AL+ F  M      P+  T  S+L   +++  +K+       +  + G     S 
Sbjct: 512 GDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSH 571

Query: 415 ISCLITTYGKCNALNESKRVLSEI 438
            +C+I   G+     E+ R++  +
Sbjct: 572 YACMIDMLGRNGRFAEALRMIENM 595



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 216/458 (47%), Gaps = 13/458 (2%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           LFD   R +++ +   ISG  R  +   A  +F  +   G+ P+ F  ++ + AC +   
Sbjct: 92  LFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGA 151

Query: 97  N---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
               E VH + ++ GF++  ++ S  IE Y++ G + +AE  FR     D V YT++V  
Sbjct: 152 LGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSA 211

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
              NGE  ++ +V  +M   GL+ NE ++T++L A      GEQIHG+ +KV  +     
Sbjct: 212 LCRNGELARAVDVLCQMTRQGLQPNEHTMTSML-AECPRGIGEQIHGYMLKV--MGSQSV 268

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFN 270
           + + A+++ Y R G    A  +F+ +   +VVSW   +     DG   +A  +F ++   
Sbjct: 269 YASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISE 328

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
             Q NE+     LS+ G   +   G+QI     K   M  + + NAL+SMYG+ G V++ 
Sbjct: 329 GVQPNEFAFSIALSACGSVCL---GRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSEL 385

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            ++   +   D VSW + I+   +NGF  +A+ +   M      PN Y  +S L + ++ 
Sbjct: 386 EAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADL 445

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             L Q  Q+H   +K G        + LI  Y KC  +  ++     +D  + +  N+L 
Sbjct: 446 ALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLI 505

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             L        ALE +  +  S    + STF  VL  C
Sbjct: 506 HGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGC 543



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 176/358 (49%), Gaps = 10/358 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K         ST LI  ++++ DF  A     + ++++++++ +++    R  
Sbjct: 254 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDG 313

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           +   AL++F  +  +G++P+ F FS  + ACGS+     +H   +K    + + + +  +
Sbjct: 314 RLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAIKRDLMTDIRVSNALL 373

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y +SG +   E       + D V++TA +     NG  +K+  + ++M S G   N++
Sbjct: 374 SMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 433

Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           + ++ L +  D+    +G Q+H   +K+G    VC    NA++N+Y +CG+   A   FD
Sbjct: 434 AFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCT--GNALINMYSKCGRIGSARLAFD 491

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   DV+SW+  I   A   D   A   F ++  +D++ ++ T +++L       +++ 
Sbjct: 492 VMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKE 551

Query: 295 GKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
           G+   +    + G     S    +I M G+ G+  +A  + + + F+ D + W +++A
Sbjct: 552 GETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLA 609


>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/601 (30%), Positives = 309/601 (51%), Gaps = 40/601 (6%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           + +G+Q+H   + +G        L + ++N Y      +DA  + +     D + W+  I
Sbjct: 97  LSQGKQLHAQVISLGLDQNPI--LVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLI 154

Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +A       VEA  ++K++     + +EYT  ++L + G      +G ++          
Sbjct: 155 SAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSME 214

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             + + NAL+SMYG+ G++  AR +FD +  +DSVSWN++I+ Y+  G + +A  +F  M
Sbjct: 215 WSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSM 274

Query: 369 LE--------------------------FSLIPNGYT--------MASILEAVSNSKSLK 394
            E                            LI    T        M   L A S+  ++K
Sbjct: 275 QEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIK 334

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              ++H H +++ F + D++ + LIT Y +C  L  +  +    ++K  +  NA+ S   
Sbjct: 335 LGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYA 394

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR-YDQDI 513
           +   + E   L+R +     E N  T + VL  CA + +L+ GK  HC  +K + +++ +
Sbjct: 395 HMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYL 454

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            + +A++DMY + G + +A++ F  + +     + +M++GY   G       LF +M K 
Sbjct: 455 LLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKL 514

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            +KPD +T +AVLT+C H+GLV + +     M D+HG++P+LEHYAC+ DL GR GLL  
Sbjct: 515 EIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNK 574

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           AK  I  MP  P + +W +LL AC I+GN ++G  A  KLLE++PD+   YVL++N+YA+
Sbjct: 575 AKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAA 634

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
           AG W  + ++R  M+   + K PG +W+ VG     F  GDSS+  + EIY  +  L E 
Sbjct: 635 AGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGLNEL 694

Query: 754 M 754
           M
Sbjct: 695 M 695



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 220/487 (45%), Gaps = 49/487 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q+++ +I  G   +PIL + L++ +T       A +F+ ++ N  D + +N LIS   R 
Sbjct: 102 QLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDA-QFVTESSNTLDPLHWNLLISAYVRN 160

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG-SLQENE--IVHGVCLKLGFSSRVYLV 116
                AL ++  +  + + PD +T+ S++KACG SL  N    VH           +++ 
Sbjct: 161 GFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVH 220

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y + G++  A   F +    D+V++  ++  Y   G + ++ ++F  M+  G+E
Sbjct: 221 NALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVE 280

Query: 177 LNEFSLTAVLGASFD-------------------------------------VKEGEQIH 199
           +N      + G                                         +K G++IH
Sbjct: 281 MNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIH 340

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--AACDG 257
           G  V+  F   V +++ NA++ +Y RC     A  +F    E  +++W+  ++  A  D 
Sbjct: 341 GHAVRTCF--DVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDR 398

Query: 258 VEAFG-LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIGN 315
            E    LF+++     + N  T+ ++L        L+ GK+   +  K   F E + + N
Sbjct: 399 YEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWN 458

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           AL+ MY + G+V +AR +FD L  +D V++ SMI GY   G     L +F  M +  + P
Sbjct: 459 ALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKP 518

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRV 434
           +  TM ++L A S+S  + Q   +   +I   G +      +C+   +G+   LN++K  
Sbjct: 519 DHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEF 578

Query: 435 LSEIDKK 441
           ++ +  K
Sbjct: 579 ITGMPYK 585



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 136/613 (22%), Positives = 255/613 (41%), Gaps = 73/613 (11%)

Query: 52  LISGLARFCQSG---PALKLFDRLRYQGLRPDAF--TFSSLVKACG---SLQENEIVHGV 103
           LI+ L  F   G    A K F ++++             SL+ AC    SL + + +H  
Sbjct: 47  LIASLKDFVTHGHLTNAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLSQGKQLHAQ 106

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
            + LG      LVS  +  Y     +V A+        LD + +  ++  YV NG F ++
Sbjct: 107 VISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNGFFVEA 166

Query: 164 KEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
             V+  M +  +E +E++  +VL   G S D   G ++H   ++   +      ++NA++
Sbjct: 167 LCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHR-SIEASSMEWSL-FVHNALV 224

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQIN-- 275
           ++Y R G+   A  +FD +   D VSW+  I+  A  G+  EAF LF  ++    ++N  
Sbjct: 225 SMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVI 284

Query: 276 --------------------------------EYTMINLLSSVGGERILRAGKQIQAFCY 303
                                              M+  L++      ++ GK+I     
Sbjct: 285 IWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAV 344

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           +  F    ++ NALI+MY +C  +  A  +F     K  ++WN+M++GY+    + +   
Sbjct: 345 RTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTF 404

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK----SGFLLDDSMISCLI 419
           +F  ML+  + PN  T+AS+L   +   +L+   + H +I+K      +LL   + + L+
Sbjct: 405 LFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLL---LWNALV 461

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y +   + E+++V   + K++ V   ++             L+L+  +     + +  
Sbjct: 462 DMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHV 521

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-----SAVIDMYCKCGTIEDAKR 534
           T   VL AC+    + QG+ +     K   D    V      + + D++ + G +  AK 
Sbjct: 522 TMVAVLTACSHSGLVAQGQVL----FKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKE 577

Query: 535 AFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHA 592
               +  + + A W  ++     HG          K+    +KPD   Y  ++ +    A
Sbjct: 578 FITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKL--LEMKPDHSGYYVLIANMYAAA 635

Query: 593 GLVR---EARTYL 602
           G  R   E RTY+
Sbjct: 636 GSWRKLAEVRTYM 648



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 109/228 (47%)

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           + + S+L A ++ KSL Q  Q+H+ +I  G   +  ++S L+  Y   N L +++ V   
Sbjct: 82  HPIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTES 141

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
            +  + +H N L S  V      EAL +Y+ +     E +  T+  VLKAC    D   G
Sbjct: 142 SNTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSG 201

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
             +H     +  +  +FV +A++ MY + G +E A+  F  + R     WN ++  YA  
Sbjct: 202 LEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASR 261

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
           G + E   LF  M + GV+ + I +  +   C H+G  R A   +S M
Sbjct: 262 GIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQM 309



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/366 (20%), Positives = 164/366 (44%), Gaps = 17/366 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGL 56
           +I   L  N    D +   T+IS +     ++ AF+     Q      ++I +N +  G 
Sbjct: 234 EIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGC 293

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
                   AL+L  ++R   +  DA      + AC   G+++  + +HG  ++  F    
Sbjct: 294 LHSGNFRGALQLISQMR-TSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFD 352

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
            + +  I  Y++  ++  A + F    +   + + AM+ GY     +++   +F EM   
Sbjct: 353 NVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQE 412

Query: 174 GLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G+E N  ++ +VL       +++ G++ H + +K          L NA++++Y R G+ L
Sbjct: 413 GMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYL-LLWNALVDMYSRSGRVL 471

Query: 231 DAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A K+FD +T+ D V+++  I       +G     LF+++   + + +  TM+ +L++  
Sbjct: 472 EARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACS 531

Query: 288 GERILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSW 345
              ++  G+ +      V G +  +     +  ++G+ G +N A+     + +K  S  W
Sbjct: 532 HSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMW 591

Query: 346 NSMIAG 351
            +++  
Sbjct: 592 ATLLGA 597


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/567 (31%), Positives = 288/567 (50%), Gaps = 69/567 (12%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------------------D 256
           L+N +++LY + G+  DA  +FD++ + D+ SW+  ++A                    D
Sbjct: 60  LHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRD 119

Query: 257 GV----------------EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
            V                E+  LFK ++   F+  EYT++++L++      LR GKQI  
Sbjct: 120 SVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHG 179

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
                 F+  V I NAL  MY KCG++  AR +FD L  K+ VSWN MI+GY++NG   +
Sbjct: 180 SIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEK 239

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
            + +   M     +P+  TM++I                                   I 
Sbjct: 240 CIGLLHQMRLSGHMPDQVTMSTI-----------------------------------IA 264

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y +C  ++E++RV SE  +K+ V   A+           +AL L+  +     E +  T
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYT 324

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
            S V+ +CA +  L  G+A+H  ++ A  + ++ V SA+IDMY KCG I+DA+  F  + 
Sbjct: 325 LSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMP 384

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             ++  WNAM++G AQ+G   +   LF  M +   KPD +T++ +L++C H   + + + 
Sbjct: 385 TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQE 444

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           Y   +++ HG+ P L+HYAC+V+LLGR G +E A   I  M   PD  IW +LLS C+  
Sbjct: 445 YFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTK 504

Query: 661 GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           G+I    +A   L EL P     Y++LSN+YAS G W DV  +R  MK K + K  G+SW
Sbjct: 505 GDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSW 564

Query: 721 IHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           I +    H F + D +H +S++IY++L
Sbjct: 565 IEIDNEVHRFTSEDRTHPESEDIYEKL 591



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 186/396 (46%), Gaps = 43/396 (10%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIV 100
           RD ++YN  I+G +       +L+LF R++ +G  P  +T  S++ A   L +    + +
Sbjct: 118 RDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQI 177

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGE 159
           HG  +   F   V++ +   + YAK GEI  A   F DCL   N V++  M+ GY  NG+
Sbjct: 178 HGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLF-DCLTKKNLVSWNLMISGYAKNGQ 236

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI 219
            +K   +  +MR  G   ++ +++ ++ A                               
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------------- 265

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINE 276
              Y +CG+  +A ++F E  E D+V W+  +   A +G E  A  LF ++     + + 
Sbjct: 266 ---YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           YT+ +++SS      L  G+ +       G    + + +ALI MY KCG ++DARS+F+ 
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  ++ VSWN+MI G ++NG    AL++F +ML+    P+  T   IL A  +   ++Q 
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG 442

Query: 397 MQVHSHII-KSGFLLDDSMISCLITTYGKCNALNES 431
            +    I  + G        +C++   G+   + ++
Sbjct: 443 QEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQA 478



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 208/463 (44%), Gaps = 79/463 (17%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVH 101
           Q  D   +N L+   A+F +   A  LFD++    L+ D F++++L+ A           
Sbjct: 54  QPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM----LKRDIFSWNALLSA----------- 98

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
                                YAKSG I + +  F      D+V+Y   + G+  N    
Sbjct: 99  ---------------------YAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ 137

Query: 162 KSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNA 218
           +S E+F  M+  G E  E+++ ++L AS    D++ G+QIHG  +   FL  V   + NA
Sbjct: 138 ESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNV--FIWNA 195

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQIN 275
           + ++Y +CG+   A  +FD +T+ ++VSW+  I+      +     GL   +R +    +
Sbjct: 196 LTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           + TM                                   + +I+ Y +CG+V++AR +F 
Sbjct: 256 QVTM-----------------------------------STIIAAYCQCGRVDEARRVFS 280

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
               KD V W +M+ GY++NG    AL +F  ML   + P+ YT++S++ + +   SL  
Sbjct: 281 EFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH 340

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
              VH   I +G   +  + S LI  Y KC  +++++ V + +  +N V  NA+      
Sbjct: 341 GQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQ 400

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                +ALEL+  +     + +  TF  +L AC     +EQG+
Sbjct: 401 NGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 185/454 (40%), Gaps = 49/454 (10%)

Query: 9   NGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKL 68
           +GH  D +  +T+I+ + +      A R   + + +DI+ + A++ G A+  +   AL L
Sbjct: 250 SGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLL 309

Query: 69  FDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
           F+ +  + + PD++T SS+V +C    SL   + VHG  +  G ++ + + S  I+ Y+K
Sbjct: 310 FNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G I  A   F      + V++ AM+ G   NG    + E+F  M     + +  +   +
Sbjct: 370 CGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGI 429

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKMFDEIT-EP 242
           L A       EQ   +   +    G+   L++   ++NL  R G+   AV +   +  +P
Sbjct: 430 LSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDP 489

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI--------NEYTMINLLSSVGGERI 291
           D + WS  +   +   D V A    + L   D  I        N Y  +     V   R 
Sbjct: 490 DFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRN 549

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L   K ++ F    GF   + I N +     +     ++  I++ L        N +I  
Sbjct: 550 LMKSKNVKKF---AGF-SWIEIDNEVHRFTSEDRTHPESEDIYEKL--------NMLIGK 597

Query: 352 YSENGFF------------NQALDMFCH-----MLEFSLI--PNGYTMASILEAVSNSKS 392
             E GF             ++     C       L F LI  PNG +   I++ +     
Sbjct: 598 LQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICND 657

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
             + M+  S II    +L DS      +T GKC+
Sbjct: 658 CHEFMKFASRIIGRQIILRDSNRFHHFST-GKCS 690



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 167/367 (45%), Gaps = 48/367 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           QI+  +I      +  +   L   + K  +  +A R+LFD    ++++++N +ISG A+ 
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQA-RWLFDCLTKKNLVSWNLMISGYAKN 234

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
            Q    + L  ++R  G  PD  T S+++ A                             
Sbjct: 235 GQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA----------------------------- 265

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
              Y + G +  A   F +  + D V +TAM+ GY  NG  + +  +F EM    +E + 
Sbjct: 266 ---YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322

Query: 180 FSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKLDAVK 234
           ++L++V+ +      +  G+ +HG  +    L+G+ N+L  ++A++++Y +CG   DA  
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSI----LAGLNNNLLVSSALIDMYSKCGFIDDARS 378

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ +   +VVSW+  I          +A  LF+++    F+ +  T I +LS+      
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMI 349
           +  G++   +   + G    +     ++++ G+ G++  A ++   +    D + W++++
Sbjct: 439 IEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498

Query: 350 AGYSENG 356
           +  S  G
Sbjct: 499 SICSTKG 505



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/232 (19%), Positives = 93/232 (40%), Gaps = 36/232 (15%)

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG------------- 558
           D F+ + ++ +Y K G + DA+  F K+ +  +  WNA++  YA+ G             
Sbjct: 57  DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 559 ------------------CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
                             C  E   LF +M + G +P E T +++L +      +R  + 
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
               +  +   +  +  +  + D+  + G +E A+   D +    +   W  ++S     
Sbjct: 177 IHGSII-VRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKN 234

Query: 661 GNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           G  +  +GLL   +L    PD  +   +++  Y   G  ++  ++  E KEK
Sbjct: 235 GQPEKCIGLLHQMRLSGHMPDQVTMSTIIA-AYCQCGRVDEARRVFSEFKEK 285


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 165/466 (35%), Positives = 260/466 (55%), Gaps = 1/466 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +L+++    R L   + I A      F   V + N+LI +Y KCG V DAR +FD +  +
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D  SW S+IAGY++N   ++AL +   ML     PNG+T AS+L+A   S S     Q+H
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  +K  +  D  + S L+  Y +C  ++ +  V  +++ KN V  NAL +         
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
             L ++  +  +  E    T+S V  A A +  LEQGK +H   +K+      FV + ++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY K G++ DA++ F ++ +  +  WN+M+  +AQ+G   E    F +M K GV  ++I
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+L++LT+C H GLV+E + Y   M + + L P+++HY  +VDLLGR GLL  A + I +
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP+ P A +W +LL +C ++ N  +G  A   + EL PD+    VLL N+YAS G W+  
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
            ++RK MK   + KEP  SW+ +    H F A D +H +S+EIYK+
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKK 533



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 175/341 (51%), Gaps = 4/341 (1%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFND 271
           L+N++++LY +CG   DA ++FD +   D+ SW+  IA         EA GL   +    
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR 160

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+ N +T  +LL + G       G+QI A   K  + + V +G+AL+ MY +CG+++ A 
Sbjct: 161 FKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAI 220

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           ++FD L  K+ VSWN++IAG++  G     L MF  M         +T +S+  A++   
Sbjct: 221 AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 280

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L+Q   VH+H+IKSG  L   + + ++  Y K  ++ ++++V   +DKK+ V  N++ +
Sbjct: 281 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT 340

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    EA+  +  +      +N  TF  +L AC+    +++GK    +  +   + 
Sbjct: 341 AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEP 400

Query: 512 DIFVESAVIDMYCKCGTIEDAKR-AFRKICRDSLAGWNAMM 551
           +I     V+D+  + G + DA    F+   + + A W A++
Sbjct: 401 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 159/324 (49%), Gaps = 11/324 (3%)

Query: 84  FSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           + SL+ AC    SL +   +H       F+  V+L +  I  Y K G +  A   F    
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQ 197
             D  ++T+++ GY  N   D++  +   M     + N F+  ++L   GAS     GEQ
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-- 255
           IH   VK  +   V  ++ +A++++Y RCG+   A+ +FD++   + VSW+  IA     
Sbjct: 187 IHALTVKYDWHDDV--YVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 244

Query: 256 -DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            DG     +F +++ N F+   +T  ++ S++ G   L  GK + A   K G      +G
Sbjct: 245 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 304

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N ++ MY K G + DAR +FD +  KD V+WNSM+  +++ G   +A+  F  M +  + 
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364

Query: 375 PNGYTMASILEAVSNSKSLKQAMQ 398
            N  T  SIL A S+   +K+  Q
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQ 388



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 170/346 (49%), Gaps = 18/346 (5%)

Query: 17  LSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           L  +LI  + K    AD RR F  +     RD+ ++ +LI+G A+      AL L   + 
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGM---PARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157

Query: 74  YQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
               +P+ FTF+SL+KA G+   +   E +H + +K  +   VY+ S  ++ YA+ G + 
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F      + V++ A++ G+   G+ + +  +F EM+  G E   F+ ++V  A  
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIA 277

Query: 191 DV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            +   ++G+ +H   +K G    +   + N I+++Y + G  +DA K+FD + + DVV+W
Sbjct: 278 GIGALEQGKWVHAHMIKSG--ERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTW 335

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  + A      G EA   F+++R     +N+ T +++L++     +++ GKQ      +
Sbjct: 336 NSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE 395

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMI 349
                 +     ++ + G+ G +NDA   IF   +   +  W +++
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 9/254 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K   H D  + + L+  + +      A       ++++ +++NALI+G AR  
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
                L +F  ++  G     FT+SS+  A    G+L++ + VH   +K G     ++ +
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG ++ A   F      D V + +M+  +   G   ++   F EMR  G+ L
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA-V 233
           N+ +  ++L A      VKEG+Q      +      + +++   +++L  R G   DA V
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVT--VVDLLGRAGLLNDALV 423

Query: 234 KMFDEITEPDVVSW 247
            +F    +P    W
Sbjct: 424 FIFKMPMKPTAAVW 437


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/472 (35%), Positives = 265/472 (56%), Gaps = 2/472 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            +L+    +R +R G+++     K  ++  V +   LI +Y KC  + DAR +FD +  K
Sbjct: 95  TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW +MI+ YS+ GF  +AL++F  ML     PN +T A+IL +   S   +   Q+H
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           S  IK  +     + S L+  Y K   + ++  V   + +++ V   A+ S         
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL+L+R +       N  T++ VL A + +  L  GK +H   L++     + + +++I
Sbjct: 275 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 334

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDE 579
           DMY KCG +  A+R F  +   +   WNAM++GY++HG   EV  LF  M +   VKPD 
Sbjct: 335 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 394

Query: 580 ITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           ITYLAVL+ C H  L       + + ++   G+ P + HY C+VDLLGR G +E A   I
Sbjct: 395 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 454

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
            +MP  P A IW SLL +C ++ ++++G++ G KLLEL+P+N   YV+LSNLYASAG W 
Sbjct: 455 KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWE 514

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           D+  +R  M+EK + KEPG SW+ +    H F+A D +H + +E+ K++ +L
Sbjct: 515 DMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKEL 566



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 196/388 (50%), Gaps = 17/388 (4%)

Query: 164 KEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           KE  ++M  LG E+       +L    +   ++EG+++H   +K  +L  V  +L   ++
Sbjct: 75  KEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSV--YLRTRLI 132

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEY 277
            LY +C    DA +MFDE+ + +VVSW+  I+A        EA  LF ++  +D + N +
Sbjct: 133 VLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHF 192

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T   +L+S  G      G+QI +   K  +   + +G++L+ MY K G++ DA  +F  L
Sbjct: 193 TFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCL 252

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D V+  ++I+GY++ G   +AL +F  +    +  N  T AS+L A+S   +L    
Sbjct: 253 PERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGK 312

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           QVHSH+++SG      +++ LI  Y KC  +  ++R+   + ++  +  NA+   LV  S
Sbjct: 313 QVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAM---LVGYS 369

Query: 458 CHA---EALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQ 511
            H    E LEL++ +    + + +  T+  VL  C+     + G  I  + +  K   + 
Sbjct: 370 KHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEP 429

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           DI     V+D+  + G +E+A    +K+
Sbjct: 430 DIGHYGCVVDLLGRAGRVEEAFDFIKKM 457



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 184/388 (47%), Gaps = 14/388 (3%)

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
           L   C SG   +   ++   G       + +++  C S   ++E + VH   +K  +   
Sbjct: 65  LKTLCSSGQLKEALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPS 124

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VYL +  I  Y K   +  A   F +    + V++TAM+  Y   G   ++  +FVEM  
Sbjct: 125 VYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLR 184

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
              E N F+   +L +   S   + G QIH   +K  + S +   + ++++++Y + G+ 
Sbjct: 185 SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHM--FVGSSLLDMYAKSGRI 242

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA  +F  + E DVV+ +  I+         EA  LF+ L+      N  T  ++L+++
Sbjct: 243 CDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTAL 302

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G   L  GKQ+ +   + G    V + N+LI MY KCG V  AR IFD +  +  +SWN
Sbjct: 303 SGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWN 362

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII- 404
           +M+ GYS++G   + L++F  M E + + P+  T  ++L   S+ +     +++  +++ 
Sbjct: 363 AMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVN 422

Query: 405 -KSGFLLDDSMISCLITTYGKCNALNES 431
            K G   D     C++   G+   + E+
Sbjct: 423 GKDGIEPDIGHYGCVVDLLGRAGRVEEA 450



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 197/435 (45%), Gaps = 29/435 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           ++++ +IK  +     L T LI  + K     D R  F    +   ++++++ A+IS  +
Sbjct: 111 RVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFD---EMPQKNVVSWTAMISAYS 167

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSL--QENEIVHGVCLKLGFSSRVY 114
           +   +  AL LF  +      P+ FTF++++ +C GSL  +    +H + +K  + S ++
Sbjct: 168 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 227

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  ++ YAKSG I  A   F    + D VA TA++ GY   G  +++ ++F +++  G
Sbjct: 228 VGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEG 287

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  +  +VL A      +  G+Q+H   ++ G  S V   L N+++++Y +CG    
Sbjct: 288 MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVV--LLNSLIDMYSKCGNVCY 345

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR-FNDFQINEYTMINLLSSVG 287
           A ++FD + E   +SW+  +          E   LFK +R  N  + +  T + +LS   
Sbjct: 346 ARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 405

Query: 288 GERILRAGKQI--QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS- 344
             ++   G +I       K G    +     ++ + G+ G+V +A      + F  + + 
Sbjct: 406 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAI 465

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQA 396
           W S++     +      + +   +LE        + ++ N Y  A   E + N + L Q 
Sbjct: 466 WGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQE 525

Query: 397 MQVHSHIIKSGFLLD 411
             V     +S   LD
Sbjct: 526 KAVTKEPGRSWVELD 540



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 62/116 (53%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           REV    +  +L  C +   + +G+ +H   +K  Y   +++ + +I +Y KC  + DA+
Sbjct: 86  REVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAR 145

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             F ++ + ++  W AM+  Y+Q G   E  NLF +M +   +P+  T+  +LTSC
Sbjct: 146 EMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC 201


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 207/655 (31%), Positives = 333/655 (50%), Gaps = 24/655 (3%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++   KSG +  A   F      + VA+T+ V G   NG  + +   F +M + G+  N+
Sbjct: 34  LDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPND 93

Query: 180 FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+  A L A  D   ++ GEQ+H   V+ GF     + + ++++ LY RCG    A  +F
Sbjct: 94  FAFNAALAACADASALRAGEQVHSLAVRAGFAGD--SWVGSSLVELYSRCGDLGAAKGVF 151

Query: 237 DEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D +  PDVV ++  ++A C   E   A      +     + NE+TM ++L S        
Sbjct: 152 DRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCP---FV 208

Query: 294 AGKQIQAFCYKVGFMEVVSI--GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
            G+Q+ A+  K   +   S+   +ALI  Y +  + + A+++F+ L  K+ V+W SM+  
Sbjct: 209 LGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQL 268

Query: 352 YSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           +  +G    AL +F  M+   ++ PN +  +  L A     S+    Q+HS  IK     
Sbjct: 269 HIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACG---SIALGRQLHSSAIKRNLTS 325

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + + L++ YG+   + E + VL +I+  + V      S         +A+ L   + 
Sbjct: 326 DLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLH 385

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N   FS  L +CA +  L+QG+  HCLALK   D  I   +A+I++Y KCG I 
Sbjct: 386 SRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIA 445

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSC 589
            AK AF  +    +  WN+++ GYAQHG       +F +M    G +PDE ++L VL +C
Sbjct: 446 PAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAAC 505

Query: 590 CHAGLVREARTYLSCMSD--LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
            HAG+V E       ++    HG  P   HYAC+VD++GR G  + A   +++MP  P A
Sbjct: 506 NHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGA 565

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE----STYVLLSNLYASAGMWNDVGKL 703
            IW++LL++C ++GN++ G LA  +L+EL    E    ++YVL+S ++A  G W D  ++
Sbjct: 566 LIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRV 625

Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           R+ M E  + KE G SW+ V    H F A D SH  S  IY+ L +L++ M  TA
Sbjct: 626 RRRMDEAGVRKEAGCSWVEVHNEVHTFVARDKSHPDSASIYQILWELFDAMQDTA 680



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 230/456 (50%), Gaps = 28/456 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++SL ++ G   D  + ++L+  +++  D   A       ++ D++ Y +L+S    FC
Sbjct: 114 QVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA---FC 170

Query: 61  QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLK-LGFSSR-VYL 115
           +SG    A+    ++  QG+ P+  T +S++ +C      E VH   +K +G  S+ +Y 
Sbjct: 171 RSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFVLGEQVHAYMIKAMGLHSQSMYA 230

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG- 174
            S  I+ Y+++ E   A+  F +    + V + +M+  ++ +G  + + +VF +M S G 
Sbjct: 231 SSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGV 290

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR-CG-QKLDA 232
           +E NEF+ +  LGA   +  G Q+H   +K    S +   ++NA++++Y R C  Q+L+A
Sbjct: 291 VEPNEFAFSIALGACGSIALGRQLHSSAIKRNLTSDL--RVSNALLSMYGRICHVQELEA 348

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           V    +I  PD+VSW+  I+A        +A  L   L       N+Y   + LSS    
Sbjct: 349 V--LKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADL 406

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            +L  G+Q      K+G    +  GNALI++Y KCGQ+  A+  FD +  +D  SWNS+I
Sbjct: 407 ALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLI 466

Query: 350 AGYSENGFFNQALDMFCHMLEF-SLIPNGYTMASILEA------VSNSKSLKQAMQVHSH 402
            GY+++G  + AL +F  M       P+  +   +L A      V+   +L +A+  HS 
Sbjct: 467 HGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHS- 525

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
             + G     S  +C++   G+    +++ R++ E+
Sbjct: 526 --QHGATPSPSHYACVVDMMGRSGRFDDALRLVEEM 559



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 265/575 (46%), Gaps = 29/575 (5%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS--- 93
           LFD   R +I+ + + +SGL R  +   A+  F  +   G+ P+ F F++ + AC     
Sbjct: 49  LFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNAALAACADASA 108

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L+  E VH + ++ GF+   ++ S  +E Y++ G++ +A+  F      D V YT++V  
Sbjct: 109 LRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA 168

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
           +  +GEF+ + +   +M   G+E NE ++ ++LG+      GEQ+H + +K   L     
Sbjct: 169 FCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFVLGEQVHAYMIKAMGLHSQSM 228

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFN 270
           + ++A+++ Y R  +   A  +F+ +   +VV+W   +     DG   +A  +F D+   
Sbjct: 229 YASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISE 288

Query: 271 D-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              + NE+     L + G    +  G+Q+ +   K      + + NAL+SMYG+   V +
Sbjct: 289 GVVEPNEFAFSIALGACGS---IALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQE 345

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
             ++   +   D VSW + I+   +NGF  +A+ +   +    L+PN Y  +S L + ++
Sbjct: 346 LEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCAD 405

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
              L Q  Q H   +K G  L     + LI  Y KC  +  +K     +D ++    N+L
Sbjct: 406 LALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSL 465

Query: 450 ASVLVYASCHAEALELY---RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
                     + AL+++   R+I G+  E + S+F  VL AC     + +G A+      
Sbjct: 466 IHGYAQHGDASMALQVFGEMRSIRGT--EPDESSFLGVLAACNHAGMVNEGVAL--FRAI 521

Query: 507 ARYDQDIFVESA-----VIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCY 560
           A + Q     S      V+DM  + G  +DA R   ++  R     W  ++     HG  
Sbjct: 522 ASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNL 581

Query: 561 HE---VSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
                 +    ++S+ G   D  +Y  VL S  HA
Sbjct: 582 ETGELAAERLMELSEGGEDRDSASY--VLMSGIHA 614


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 167/436 (38%), Positives = 251/436 (57%), Gaps = 5/436 (1%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N LI+MY K G ++DA+ +FD +  ++ VSW +MI+ YS     ++AL+    ML   + 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN +T +S+L A     +L+Q   +H  IIK G   D  + S LI  Y +   L  + RV
Sbjct: 64  PNMFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             E+   + V  +++ +     S   EAL L++ +  +      +T + VL+AC  +  L
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           E G+ +H   LK  YDQD+ + +A++DMYCKCG++EDA   F ++    +  W+ M+ G 
Sbjct: 181 ELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQ+G   E   LF  M   G+KP+ +T + VL +C HAGLV E   Y   M +L G+ P 
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
            EHY C++DLLGR G L  A   I++M   PDA  W++LL+AC ++ N+D+ + A  ++L
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            L P +  TYVLLSN+YA+   WNDV ++R+ M  + + KEPG SWI V    H F  GD
Sbjct: 359 RLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD 418

Query: 735 SSHSQSKEIYKELIKL 750
            SH Q +EI  +L +L
Sbjct: 419 RSHPQIREINIQLNQL 434



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 185/342 (54%), Gaps = 11/342 (3%)

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +L++  I  Y K G +  A+  F    D + V++T M+  Y      DK+ E  V M   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 174 GLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           G+  N F+ ++VL A   +    Q+H   +K+G  S V   + +A++++Y R G+  +A+
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDV--FVRSALIDVYSRWGELENAL 118

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++FDE+   D+V WS  IA      DG EA  LFK ++   F   + T+ ++L +  G  
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +L  G+Q+     K  + + + + NAL+ MY KCG + DA ++F  ++ KD +SW++MIA
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           G ++NG+  +AL +F  M    + PN  T+  +L A S++  +++ +  + H +K  F +
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGL-YYFHSMKELFGI 295

Query: 411 DDSM--ISCLITTYGKCNALNESKRVLSEID-KKNAVHINAL 449
           D       C+I   G+   L+E+  +++E++ + +AV   AL
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRAL 337



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 175/346 (50%), Gaps = 22/346 (6%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   LI+ + KF     A        +R+++++  +IS  +    +  AL+    +  +G
Sbjct: 2   LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61

Query: 77  LRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           +RP+ FT+SS+++AC  L     +H   +K+G  S V++ S  I+ Y++ GE+ +A   F
Sbjct: 62  VRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVF 121

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VK 193
            + +  D V +++++ G+  N + D++  +F  M+  G    + +LT+VL A      ++
Sbjct: 122 DEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G Q+H   +K  +   +   LNNA++++Y +CG   DA  +F  + E DV+SWS  IA 
Sbjct: 182 LGRQVHVHVLK--YDQDLI--LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237

Query: 254 -ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A +G   EA  LF+ ++    + N  T++ +L +        AG   +   Y     E+
Sbjct: 238 LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS-----HAGLVEEGLYYFHSMKEL 292

Query: 311 VSIGNA------LISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
             I         +I + G+ G++++A  + + +    D+V+W +++
Sbjct: 293 FGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALL 338



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 20/265 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  +IK G   D  + + LI  ++++ +   A R   +    D++ ++++I+G A+  
Sbjct: 84  QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNS 143

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL+LF R++  G      T +S+++AC  L   E+   VH   LK  +   + L +
Sbjct: 144 DGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNN 201

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G +  A   F   ++ D ++++ M+ G   NG   ++ ++F  M+ LG++ 
Sbjct: 202 ALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKP 261

Query: 178 NEFSLTAVLGASFD---VKEG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           N  ++  VL A      V+EG          FG+  G     C      +++L  R G+ 
Sbjct: 262 NYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGC------MIDLLGRAGRL 315

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +AV + +E+  EPD V+W   + A
Sbjct: 316 SEAVDLINEMECEPDAVTWRALLNA 340



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 5/143 (3%)

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           F+ + +I+MY K G + DA+  F K+   ++  W  M+  Y+      +       M + 
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           GV+P+  TY +VL +C     +R+    L C     GL   +   + ++D+  R G LE 
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQ----LHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 634 AKMTIDQMPIPPDAHIWQSLLSA 656
           A    D+M +  D  +W S+++ 
Sbjct: 117 ALRVFDEM-VTGDLVVWSSIIAG 138


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/550 (33%), Positives = 294/550 (53%), Gaps = 38/550 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F  I EP+++ W+      A + D V A  L+  +       N YT   +L S   
Sbjct: 87  AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
            +  + G+QI     K+G    + +  +LISMY + G++ DA  +FD             
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206

Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                              +  KD VSWN+MI+GY+E G + +AL++F  M++ ++ P+ 
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM +++ A + S S++   QVH  I   GF  +  +++ LI  Y KC  L  +  +   
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  K+ +  N L     + + + EAL L++ +  S    N  T   +L ACA +  ++ G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386

Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + IH      LK   +    + +++IDMY KCG IE A + F  I   SL+ WNAM+ G+
Sbjct: 387 RWIHVYIDKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           A HG      +LF++M K G++PD+IT++ +L++C H+G++   R     M+  + + P+
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           LEHY C++DLLG  GL + A+  I+ M + PD  IW SLL AC ++GN++LG      L+
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 565

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           +++P+N  +YVLLSN+YASAG WN+V K R  + +K + K PG S I +    H F  GD
Sbjct: 566 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625

Query: 735 SSHSQSKEIY 744
             H +++EIY
Sbjct: 626 KFHPRNREIY 635



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 216/460 (46%), Gaps = 50/460 (10%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
           SL+  C +LQ   I+H   +K+G  +  Y +S  IE    S     +  A   F+   + 
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
           + + +  M  G+  + +   + +++V M SLGL  N ++   VL +   S   KEG+QIH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 200 GFGVKVGFLSGVCN---HLNNAIMNLYVRCGQKLDA------------------------ 232
           G  +K+G     C+   +++ +++++YV+ G+  DA                        
Sbjct: 158 GHVLKLG-----CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212

Query: 233 -------VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
                   K+FDEI   DVVSW+  I+   +     EA  LFKD+   + + +E TM+ +
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +S+      +  G+Q+  +    GF   + I NALI +Y KCG++  A  +F+ L +KD 
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +SWN++I GY+    + +AL +F  ML     PN  TM SIL A ++  ++     +H +
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392

Query: 403 IIK--SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           I K   G     S+ + LI  Y KC  +  + +V + I  K+    NA+           
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
            + +L+  +     + +  TF  +L AC+    L+ G+ I
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 203/439 (46%), Gaps = 51/439 (11%)

Query: 2   IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           I++ +IK G H     L  ++   ++S    F     A       Q  +++ +N +  G 
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILS--PHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       ALKL+  +   GL P+++TF  ++K+C    + +E + +HG  LKLG    +
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
           Y+ +  I  Y ++G +  A   F      D V+YTA++ GY                   
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
               WN         G + ++ E+F +M    +  +E ++  V+ A   S  ++ G Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            +    GF S +   + NA+++LY +CG+   A  +F+ +   DV+SW+  I        
Sbjct: 290 LWIDDHGFGSNL--KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
             EA  LF+++  +    N+ TM+++L +      +  G+ I  +  K   G     S+ 
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            +LI MY KCG +  A  +F+ ++ K   SWN+MI G++ +G  + + D+F  M +  + 
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467

Query: 375 PNGYTMASILEAVSNSKSL 393
           P+  T   +L A S+S  L
Sbjct: 468 PDDITFVGLLSACSHSGML 486



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 40/311 (12%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-----CLITTYGKCNALNESKRVLSEI 438
           L  + N K+L+    +H+ +IK G    +  +S     C+++ + +   L  +  V   I
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTI 94

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            + N +  N +      +S    AL+LY  +       N  TF  VLK+CA     ++G+
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK-------------------- 538
            IH   LK   D D++V +++I MY + G +EDA + F K                    
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214

Query: 539 -----------ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
                      I    +  WNAM+ GYA+ G Y E   LF  M K  V+PDE T + V++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C  +G +   R     + D HG    L+    ++DL  + G LE A    +++P   D 
Sbjct: 275 ACAQSGSIELGRQVHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDV 332

Query: 648 HIWQSLLSACT 658
             W +L+   T
Sbjct: 333 ISWNTLIGGYT 343



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 48/342 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
           QI+  ++K G  LD  + T+LIS + +      A +    + +RD+++Y ALI G A   
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214

Query: 59  --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
                                     + ++G    AL+LF  +    +RPD  T  ++V 
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274

Query: 90  AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           AC   GS++    VH      GF S + +V+  I+ Y+K GE+ +A   F      D ++
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
           +  ++ GY     + ++  +F EM   G   N+ ++ ++L A     + D+  G  IH +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI--GRWIHVY 392

Query: 202 GVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
             K   L GV N   L  +++++Y +CG    A ++F+ I    + SW+  I   A    
Sbjct: 393 IDKR--LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
              +F LF  +R    Q ++ T + LLS+     +L  G+ I
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492


>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/592 (31%), Positives = 309/592 (52%), Gaps = 18/592 (3%)

Query: 166 VFVEMRSL-----GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNN 217
           +F ++ SL     G+  +EF+   VL A      +++  ++H   +  GF + V   +  
Sbjct: 10  IFKQIPSLSSHTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHV--FVQT 67

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQI 274
           A++++Y +C     A  +FD++    +VSW+  I+A C      ++FG+ K ++    ++
Sbjct: 68  ALVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLEL 127

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +  T    L+S      L  G  I  +  K+G    + + N+++SMY +  Q++ A S+F
Sbjct: 128 SSATFTGFLASCS----LPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVF 183

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
             L  K  VSW  ++ GY   G   +   +F  M    + P+     +++     S +L 
Sbjct: 184 YTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLL 243

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
            AM VHS ++KSGF   D + + L+  Y KC  L  ++RV   + +K+     ++ S   
Sbjct: 244 LAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYA 303

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
                 EAL L+  +  +    N  T + VL ACA M  L  G+ I    L      D+ 
Sbjct: 304 QFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLR 363

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKF 573
           V++++I M+CKCG+I+ A+  F +I    LA W+AM+ GYA HG   E  NLF+KM ++ 
Sbjct: 364 VQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEV 423

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G+KPD I Y +VL +C H+GL+ +   Y   M    G+ P ++HY+C+VDLLGR G +E 
Sbjct: 424 GIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVEL 483

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           A  TI +MP+   A +W   LSAC  + N++LG  A   L +L+P +   +VL++NLY S
Sbjct: 484 ALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTS 543

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
            G W +  K R  +  + L KEPG+S I + G  H   A   SH +S +I++
Sbjct: 544 MGKWKEAAKARSIINARGLVKEPGWSQIEIDGAVHVLAAEGQSHLESIDIHE 595



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 228/472 (48%), Gaps = 11/472 (2%)

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+    FTF  ++KAC    SL++   +H   L  GF + V++ +  ++ Y+K     SA
Sbjct: 23  GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSA 82

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
            + F        V++ +++  +  +   D+S  +  +M+ LGLEL+  + T  L AS  +
Sbjct: 83  RLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFL-ASCSL 141

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
            +G  IHG+  K+G    +   L N+IM++Y+R  Q   A+ +F  + +  +VSW+  + 
Sbjct: 142 PQGLSIHGYITKLGL--DLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILG 199

Query: 253 ---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
              +A D  + F +F  +R      +    +NL+S       L     + +   K GF  
Sbjct: 200 GYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDH 259

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
              I N L++MY KC  +  AR +FD +  K    W SMI+GY++ G+ N+AL +F  +L
Sbjct: 260 KDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLL 319

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
             +  PN  T+A++L A +   SL+   ++  +I+ +G   D  + + LI  + KC ++ 
Sbjct: 320 RTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIK 379

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKAC 488
           +++ +   I  K+    +A+ +         EAL L+  +      + +   ++ VL AC
Sbjct: 380 KAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLAC 439

Query: 489 AAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +    +E G K    +      +  I   S ++D+  + G +E A R  +++
Sbjct: 440 SHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEM 491



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 161/366 (43%), Gaps = 22/366 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  + K G  L   L+ +++S + +      A    +    + I+++  ++ G      
Sbjct: 147 IHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGD 206

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
                 +F+++R Q + PD+  F +L+  C   G+L    +VH + LK GF  +  + + 
Sbjct: 207 VAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNL 266

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK  ++VSA   F    +     +T+M+ GY   G  +++  +F  +       N
Sbjct: 267 LVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPN 326

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E +L  VL A  +   ++ GE+I  + +  G  S +   +  ++++++ +CG    A  +
Sbjct: 327 ELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDL--RVQTSLIHMFCKCGSIKKAQAL 384

Query: 236 FDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINE----YTMINLLSSVGG 288
           F+ I   D+  WS  I   A    G EA  LF  ++ N+  I      YT + L  S  G
Sbjct: 385 FERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQ-NEVGIKPDAIVYTSVLLACSHSG 443

Query: 289 --ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSW 345
             E  L+  + +Q      G    +   + L+ + G+ G V  A R+I +  +   +  W
Sbjct: 444 LIEDGLKYFRSMQK---DFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVW 500

Query: 346 NSMIAG 351
              ++ 
Sbjct: 501 APFLSA 506



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I   ++ NG   D  + T+LI  F K    ++A        N+D+  ++A+I+G A   
Sbjct: 348 EIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHG 407

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKAC 91
               AL LF +++ + G++PDA  ++S++ AC
Sbjct: 408 MGKEALNLFHKMQNEVGIKPDAIVYTSVLLAC 439


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 199/685 (29%), Positives = 353/685 (51%), Gaps = 15/685 (2%)

Query: 80  DAFTFSSLVKACGSL--QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
           D   F  ++KA   L  +  + +H   +K GF S   + +  +  Y + G+   A   F 
Sbjct: 47  DVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFN 106

Query: 138 DCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---K 193
                 D+V++  ++ G++ NG        F   R  G E N  ++  V+ A   +    
Sbjct: 107 SMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKH 166

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G  +HG+ +K GF +   + + N+++++YV    +  A ++FDE+ E DV++WS  I  
Sbjct: 167 DGLILHGYLIKSGFWA--ISSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGG 223

Query: 254 ACDGVE---AFGLFKDLRF-NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                E      +F+ +      + +   M+++L +    R +  G+ +       GF  
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + N+LI MY KC     A  +F+ +  +++VSWNSM++G+  N  +++A  +   M 
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMR 343

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  +  +  T+ +IL+             +H  +I+ G   ++ ++S LI  Y KC  + 
Sbjct: 344 KERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIE 403

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +  V + + +++ V  + + S   +     EA+ +Y+ +     + N  T   +L+AC+
Sbjct: 404 IAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACS 463

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
              +L++ K  H +A++  +  ++ V +AV+DMY KCG I  ++RAF ++   ++  W+A
Sbjct: 464 VTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSA 523

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+  Y  +G  HE   LF +M + G+KP+ +T L+VL +C H GLV E  +    M    
Sbjct: 524 MIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQEL 583

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP--IPPDAHIWQSLLSACTIYGNIDLGL 667
           GL P  EHY+C+VD+LGR G L+ A   I  MP  +   A IW SLLSAC  YG  +LG 
Sbjct: 584 GLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGK 643

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
            A S++LEL+P N + Y++ S++YA+ G+W+D  ++R   KEK +    GYS +H+    
Sbjct: 644 EAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKA 703

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYE 752
             F AGD SH +S EI+    +L++
Sbjct: 704 CRFVAGDGSHPRSDEIFSMAQQLHD 728



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 221/448 (49%), Gaps = 20/448 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  LIK+G      +  +L+S +   AD   A     +   +D+I ++ +I G  ++ +
Sbjct: 171 LHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEE 229

Query: 62  SGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               L++F ++    G+ PD     S++KAC S ++     +VHG+ +  GF   +++ +
Sbjct: 230 PQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVEN 289

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K  +  SA   F +    +NV++ +M+ G+V N  + +++ +   MR   +E 
Sbjct: 290 SLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVET 349

Query: 178 NEFSLTAVLGA------SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E +L  +L         F  K    IH   ++ G  S     + +A+++ Y +C     
Sbjct: 350 DEVTLVNILQICKYFVHPFHCK---SIHCVMIRRG--SEANELVLSALIDAYAKCYLIEI 404

Query: 232 AVKMFDEITEPDVVSWSERIA--AACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F  +   DVVSWS  I+  A C    EA  +++++  +  + N  T+INLL +   
Sbjct: 405 AWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSV 464

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L+  K       + GF   V++G A++ MY KCG++  +R  FD L  K+ V+W++M
Sbjct: 465 TAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAM 524

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
           IA Y  NG  ++AL +F  M    L PN  T  S+L A S+   +++ + +   +++  G
Sbjct: 525 IAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELG 584

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVL 435
                   SC++   G+   L+ +  V+
Sbjct: 585 LEPGFEHYSCMVDMLGRAGKLDTAIEVI 612



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 193/401 (48%), Gaps = 20/401 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L+I  G   D  +  +LI  ++K  D   AF+   +   R+ +++N+++SG      
Sbjct: 272 VHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNEN 331

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSG 118
              A  L   +R + +  D  T  ++++ C         + +H V ++ G  +   ++S 
Sbjct: 332 YSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSA 391

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK   I  A   F      D V+++ M+ G+   G+ D++  V+ EM    ++ N
Sbjct: 392 LIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPN 451

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++  +L A   + ++K  +  HG  ++ GF S V   +  A++++Y +CG+ L + + 
Sbjct: 452 VITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVT--VGTAVVDMYSKCGEILASRRA 509

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD++   ++V+WS  IAA   +G+  EA  LF +++ +  + N  T +++L++     ++
Sbjct: 510 FDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLV 569

Query: 293 RAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI--FKDSVS-WNSM 348
             G  + ++   ++G        + ++ M G+ G+++ A  +   +    K+  S W S+
Sbjct: 570 EEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSL 629

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPN---GYTMASILEA 386
           ++     G      +    +LE  L P+   GY +AS + A
Sbjct: 630 LSACRSYGLTELGKEAISRVLE--LEPSNSAGYLVASSMYA 668


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 184/610 (30%), Positives = 315/610 (51%), Gaps = 38/610 (6%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV--RCGQKLDAVKMFDE 238
            L ++L     + + +Q+H   +K G  +     L N +M        G    A ++FDE
Sbjct: 41  PLISLLETCESMDQLQQVHCQAIKKGLNANPV--LQNRVMTFCCTHEYGDFQYARRLFDE 98

Query: 239 ITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I EP++  W+  I   +  D  +    L+ ++     + + YT   L      +  L  G
Sbjct: 99  IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 158

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +Q+     K G    V +  AL+ MY  CGQ++ AR +FD     D ++WN +I+ Y++ 
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 218

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI----IKSGFLLD 411
           G F ++  +F  M +  ++P   T+  +L A S  K L+   +VHS++    ++S  +L+
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278

Query: 412 DSMI---------------------------SCLITTYGKCNALNESKRVLSEIDKKNAV 444
           ++MI                           + +++ +     ++ ++    ++ +K+ V
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              A+    + ++   EALEL+R +  +  + +  T   VL ACA +  LE G+ I    
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
            + +   D+FV +A+IDMY KCG ++ A+  FR++ +     W AM++G A +G   +  
Sbjct: 399 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 458

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           ++F+ M K  + PDEITY+ VL++C H GLV + R Y   M+  HG+ P + HY C+VDL
Sbjct: 459 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 518

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           L R G L+ A   I+ MPI  ++ +W +LL+ C +Y   D+  +   ++LEL+PDN + Y
Sbjct: 519 LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVY 578

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VLL N+YA+   WND+ +LR+ M +K + K PG S I + G  H F AGD SH Q+K I 
Sbjct: 579 VLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNID 638

Query: 745 KELIKLYEHM 754
            +L K+ + +
Sbjct: 639 AKLDKMTQDL 648



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 258/549 (46%), Gaps = 62/549 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++   IK G + +P+L   +++     ++ DF+ A R   +    ++  +N +I G +R
Sbjct: 57  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR 116

Query: 59  --FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
             F Q G +L L + LR +G++PD +TF  L K      +L+    +HG  LK G    V
Sbjct: 117 LDFPQLGVSLYL-EMLR-RGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNV 174

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  ++ Y   G++ +A   F  C   D + +  ++  Y   G+F++S+ +F+ M   
Sbjct: 175 FVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK 234

Query: 174 GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +     +L  VL A     D++ G+++H +       S +   L NA++++Y  CG+  
Sbjct: 235 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV--LENAMIDMYADCGEMD 292

Query: 231 DAVKMFDEITEPDVVSWSERIA---------------------------AACDGV----- 258
            A+ +F  +   D++SW+  ++                           A  DG      
Sbjct: 293 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 352

Query: 259 --EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             EA  LF++++  + + +E+TM+++L++      L  G+ I+ +  +      + + NA
Sbjct: 353 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 412

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI MY KCG V+ A SIF  +  +D  +W +MI G + NG   +ALDMF +ML+ S++P+
Sbjct: 413 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 472

Query: 377 GYTMASILEAVSNS----KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
             T   +L A +++    K  K  +++ S   + G   + +   CL+    +   L E+ 
Sbjct: 473 EITYIGVLSACTHTGLVDKGRKYFLRMTS---QHGIEPNIAHYGCLVDLLARAGRLKEAY 529

Query: 433 RVLSEID-KKNAVHINA-LASVLVYASCHAEALELYRTIWGSCREVNGSTFSI---VLKA 487
            V+  +  K N++   A LA   VY       + + + +       NG+ + +   +  A
Sbjct: 530 EVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL--ELEPDNGAVYVLLCNIYAA 587

Query: 488 CAAMTDLEQ 496
           C    DL +
Sbjct: 588 CKRWNDLRE 596


>gi|357155523|ref|XP_003577148.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 735

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 212/744 (28%), Positives = 356/744 (47%), Gaps = 34/744 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            +++ L+K G   D   +  L+  +++    + A     +  +R+++++ A++SG AR  
Sbjct: 5   HLHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGG 64

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFS---------- 110
            S   L LF  +   G  P+ F  +S ++A  S  +        L+LG S          
Sbjct: 65  ASQLGLGLFVSMVRSGFLPNEFALASALRATASCHDG-------LRLGLSLHGVAVKVGV 117

Query: 111 -SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
               +  S  +  YA  G +  AE  F +    D   + AM+ GYV NG   ++    V 
Sbjct: 118 GGDPFAGSSLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVL 177

Query: 170 MRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           MR   +    F+  + + A     E   G Q+HG  +   F       + N ++++Y R 
Sbjct: 178 MRRCDM----FTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTS--VMNVLVDMYFRA 231

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLL 283
           G K  A+ +F  I   D +SW+  I+      D  E  G F D+  +  + NE T+  +L
Sbjct: 232 GLKDVAMAVFRRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVML 291

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
                +     G QI    Y  G+ E V + NA+I+M  +CG +N A   F  L F++ V
Sbjct: 292 RLCAAKENASLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIV 351

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           +WN MIAGY    +   A+ +F  M+ F   P+ +T +++L A   +   +   QVH+ I
Sbjct: 352 TWNEMIAGYGLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASI 411

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +K G      + + LI       ++  + +++ +  K + V    + S  +    + E +
Sbjct: 412 LKQGITSRQFVSTSLIKAKAVFGSVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVM 471

Query: 464 ELYRTIWG-SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
            L+    G S    +    + VL ACA    L Q + +H L ++  +     V SA++D 
Sbjct: 472 SLFDLFRGDSMNRADEFILATVLNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDA 531

Query: 523 YCKCGTIEDAKRAFRKICRDSLAG--WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           Y KCG I  AK AF  +   S     +N M+  YA HG  +E  +L+  M++  + P   
Sbjct: 532 YAKCGGIASAKSAFADVSSGSGDAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPA 591

Query: 581 TYLAVLTSCCHAGLVREARTYLSCM-SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           T++A++++C + GLV + +   S M S+ HG+ P   +YA +VDLL R G L  AK  I+
Sbjct: 592 TFVALVSACSNFGLVEQGKILFSLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIE 651

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            MP+ P   +W+SL++ C I+GN++LG+LA  ++L + P ++  YV LSN++A  G W+ 
Sbjct: 652 VMPLHPWPSVWRSLMNGCRIHGNMELGVLAAEQILSMTPSSDGAYVSLSNVFADDGEWHL 711

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHV 723
             + RK M E  + K   YS I V
Sbjct: 712 AEEARKMMAENQVRKVHAYSRIEV 735


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 192/632 (30%), Positives = 314/632 (49%), Gaps = 80/632 (12%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I ++ ++  I  A   F      D   YT M+ GY  N  FD + ++F EM    +    
Sbjct: 2   ITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV---- 57

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            S  +++   FD                                  C     A K+FDE+
Sbjct: 58  VSWNSMIKGCFD----------------------------------CADLTMARKLFDEM 83

Query: 240 TEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            E  VVSW+                             TMIN     G   +       +
Sbjct: 84  PERSVVSWT-----------------------------TMINGFLQFGKIEV------AE 108

Query: 300 AFCYKVGFMEVVSIGNALISMYGKC--GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
              YK+ F ++ +  N++I  YG C  G+V D   +F  +  ++ +SW SMI G  ++G 
Sbjct: 109 GLFYKMPFRDIAA-WNSMI--YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGR 165

Query: 358 FNQALDMFCHMLE--FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             +AL +F  M+     + P   T   ++ A +N+ +L Q +Q+H+H+ K G+  D  + 
Sbjct: 166 SEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYIS 225

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + LIT Y  C  + +S RV       N V   AL +       H +AL+++  +      
Sbjct: 226 AALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL 285

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N S+F+  L +C  +  L+ G+ IH  A+K   + D+FV +++I MY +CG + D    
Sbjct: 286 PNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVI 345

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F++I + ++  WN++++G AQHGC       FN+M +  V+PDEIT+  +L++C H+G+ 
Sbjct: 346 FKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMS 405

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           ++ R      S+      +L+HYAC+VD+LGR G LE A+  I  MP+  ++ +W  LLS
Sbjct: 406 QKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLS 465

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           ACT++  +++   A   +++L+P   S YVLLSNLYASA  W+DV ++R+EMK++ + K+
Sbjct: 466 ACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQ 525

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           PG SWI + G+ + F +GD SH  S  IY++L
Sbjct: 526 PGRSWITIKGWRNEFLSGDRSHPSSDRIYQKL 557



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 135/594 (22%), Positives = 256/594 (43%), Gaps = 73/594 (12%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L T +I+ + +   F  A +  ++   +D++++N++I G         A KLFD + 
Sbjct: 25  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 84

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            + +     ++++++       + E+  G+  K+ F   +   +  I  Y  +G +    
Sbjct: 85  ERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRD-IAAWNSMIYGYCCNGRVEDGL 139

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS------LTAVLG 187
             F++    + +++T+M+ G   +G  +++  +F +M   G+E+   S      +TA   
Sbjct: 140 RLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACAN 199

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           AS  + +G QIH    K+G+      +++ A++  Y  C Q  D++++F      +VV W
Sbjct: 200 AS-ALYQGVQIHAHVFKLGYSFDA--YISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 256

Query: 248 SERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  +      C   +A  +F ++       N+ +  + L+S  G   L  G++I     K
Sbjct: 257 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 316

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +G    V +GN+LI MY +CG +ND   IF  +  K+ VSWNS+I G +++G    AL  
Sbjct: 317 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 376

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  M+   + P+  T   +L A S           HS + + G         CL   +  
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACS-----------HSGMSQKG--------RCLFKYF-- 415

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
               +E+K    ++D     H   +  +L  +    EA EL R +     + N   + ++
Sbjct: 416 ----SENKSAEVKLD-----HYACMVDILGRSGKLEEAEELIRNM---PVKANSMVWLVL 463

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI---DMYCKCGTIEDAKRAFRKICR 541
           L AC   + LE  +     A K   D +    SA +   ++Y       D  R  R++ +
Sbjct: 464 LSACTMHSKLEVAER----AAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQ 519

Query: 542 D-----------SLAGW-NAMMMGYAQHGC----YHEVSNLFNKMSKFGVKPDE 579
                       ++ GW N  + G   H      Y ++  L  K+ + G  PD+
Sbjct: 520 RGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQ 573



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K G+  D  +S  LI+ +        + R      + +++ + AL++G    C
Sbjct: 208 QIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNC 267

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +   ALK+F  +  +G+ P+  +F+S + +C  L+       +H   +KLG  + V++ +
Sbjct: 268 KHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGN 327

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y + G +    + F+     + V++ +++ G   +G    +   F +M    +E 
Sbjct: 328 SLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 387

Query: 178 NEFSLTAVLGA 188
           +E + T +L A
Sbjct: 388 DEITFTGLLSA 398


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 199/685 (29%), Positives = 353/685 (51%), Gaps = 15/685 (2%)

Query: 80  DAFTFSSLVKACGSL--QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
           D   F  ++KA   L  +  + +H   +K GF S   + +  +  Y + G+   A   F 
Sbjct: 47  DVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFN 106

Query: 138 DCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---K 193
                 D+V++  ++ G++ NG        F   R  G E N  ++  V+ A   +    
Sbjct: 107 SMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKH 166

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G  +HG+ +K GF +   + + N+++++YV    +  A ++FDE+ E DV++WS  I  
Sbjct: 167 DGLILHGYLIKSGFWA--ISSVQNSLLSMYVDADMEC-ARELFDEMHEKDVIAWSVMIGG 223

Query: 254 ACDGVE---AFGLFKDLRF-NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                E      +F+ +      + +   M+++L +    R +  G+ +       GF  
Sbjct: 224 YLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDC 283

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + N+LI MY KC     A  +F+ +  +++VSWNSM++G+  N  +++A  +   M 
Sbjct: 284 DLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMR 343

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  +  +  T+ +IL+             +H  +I+ G   ++ ++S LI  Y KC  + 
Sbjct: 344 KERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIE 403

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +  V + + +++ V  + + S   +     EA+ +Y+ +     + N  T   +L+AC+
Sbjct: 404 IAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACS 463

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
              +L++ K  H +A++  +  ++ V +AV+DMY KCG I  ++RAF ++   ++  W+A
Sbjct: 464 VTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSA 523

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+  Y  +G  HE   LF +M + G+KP+ +T L+VL +C H GLV E  +    M    
Sbjct: 524 MIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQEL 583

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP--IPPDAHIWQSLLSACTIYGNIDLGL 667
           GL P  EHY+C+VD+LGR G L+ A   I  MP  +   A IW SLLSAC  YG  +LG 
Sbjct: 584 GLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGK 643

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
            A S++LEL+P N + Y++ S++YA+ G+W+D  ++R   KEK +    GYS +H+    
Sbjct: 644 EAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKA 703

Query: 728 HHFYAGDSSHSQSKEIYKELIKLYE 752
             F AGD SH +S EI+    +L++
Sbjct: 704 CRFVAGDGSHPRSDEIFSMAQQLHD 728



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 221/448 (49%), Gaps = 20/448 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  LIK+G      +  +L+S +   AD   A     +   +D+I ++ +I G  ++ +
Sbjct: 171 LHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEE 229

Query: 62  SGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               L++F ++    G+ PD     S++KAC S ++     +VHG+ +  GF   +++ +
Sbjct: 230 PQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVEN 289

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K  +  SA   F +    +NV++ +M+ G+V N  + +++ +   MR   +E 
Sbjct: 290 SLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVET 349

Query: 178 NEFSLTAVLGA------SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +E +L  +L         F  K    IH   ++ G  S     + +A+++ Y +C     
Sbjct: 350 DEVTLVNILQICKYFVHPFHCK---SIHCVMIRRG--SEANELVLSALIDAYAKCYLIEI 404

Query: 232 AVKMFDEITEPDVVSWSERIA--AACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++F  +   DVVSWS  I+  A C    EA  +++++  +  + N  T+INLL +   
Sbjct: 405 AWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSV 464

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L+  K       + GF   V++G A++ MY KCG++  +R  FD L  K+ V+W++M
Sbjct: 465 TAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAM 524

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-G 407
           IA Y  NG  ++AL +F  M    L PN  T  S+L A S+   +++ + +   +++  G
Sbjct: 525 IAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELG 584

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVL 435
                   SC++   G+   L+ +  V+
Sbjct: 585 LEPGFEHYSCMVDMLGRAGKLDTAIEVI 612



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 193/401 (48%), Gaps = 20/401 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L+I  G   D  +  +LI  ++K  D   AF+   +   R+ +++N+++SG      
Sbjct: 272 VHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNEN 331

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSG 118
              A  L   +R + +  D  T  ++++ C         + +H V ++ G  +   ++S 
Sbjct: 332 YSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSA 391

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK   I  A   F      D V+++ M+ G+   G+ D++  V+ EM    ++ N
Sbjct: 392 LIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPN 451

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             ++  +L A   + ++K  +  HG  ++ GF S V   +  A++++Y +CG+ L + + 
Sbjct: 452 VITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVT--VGTAVVDMYSKCGEILASRRA 509

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD++   ++V+WS  IAA   +G+  EA  LF +++ +  + N  T +++L++     ++
Sbjct: 510 FDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLV 569

Query: 293 RAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI--FKDSVS-WNSM 348
             G  + ++   ++G        + ++ M G+ G+++ A  +   +    K+  S W S+
Sbjct: 570 EEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSL 629

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPN---GYTMASILEA 386
           ++     G      +    +LE  L P+   GY +AS + A
Sbjct: 630 LSACRSYGLTELGKEAISRVLE--LEPSNSAGYLVASSMYA 668


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 201/668 (30%), Positives = 331/668 (49%), Gaps = 17/668 (2%)

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR--VYLVSGFIE 121
           PA    + L       DA     L+ ACG+L+    +HG  L L       +   +  + 
Sbjct: 4   PAAHSVEHLARASAPRDASALVLLLPACGTLRSLRALHGRLLLLTSGLLRGIRARTKLLS 63

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS--LGLELNE 179
            YA  G++ SA          D  AY  M+   V  G    +  +  +MR         +
Sbjct: 64  CYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQAD 123

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
             L+  L A   S D + G ++H   VK G   G    + N+++++Y + G   +A K+F
Sbjct: 124 VVLSLALKACVRSADFRYGRRLHCDVVKAG---GADGFVMNSLVDMYAKAGDLENARKVF 180

Query: 237 DEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D + E +VVSW+  ++ +  +G+  E   LF ++R ++   +EYTM+++L++      L 
Sbjct: 181 DRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLH 240

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+ I     K G      I  +L+ MY KC +V DAR +FD L F D V W +MI GY+
Sbjct: 241 QGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYT 300

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +N     AL +F H    S++PN  T+A+++ A +  + L     VH+  +K G +  D 
Sbjct: 301 QNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDV 360

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + L+  Y KC AL E+  +   I  K+ V  N++ +         E+L L+  +    
Sbjct: 361 VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRM--RM 418

Query: 474 REVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           + ++    S+V  L AC  + DL  GK  H  A+K  +  +I+V +A++++Y KC  +  
Sbjct: 419 QGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPS 478

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A+R F  +   +   W+AM+ GY   G      +LFN+M K  + P+E+ + ++L++C H
Sbjct: 479 AQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSH 538

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G+V   + Y   M+    + P ++HYAC+VD++ R G LE A   I  MPI     +W 
Sbjct: 539 TGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWG 598

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           S L  C ++  ++ G  A  K+  L P+    YVL+SNLY S G W+    +R+ M+E+ 
Sbjct: 599 SFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQG 658

Query: 712 LCKEPGYS 719
           L K PG S
Sbjct: 659 LVKLPGCS 666



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 215/444 (48%), Gaps = 14/444 (3%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +  +L+  + K  D   A +       R+++++ +++SG  +   +   L LF+ +R
Sbjct: 156 DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMR 215

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
              + P  +T  S++ AC   G L +   +HG  +K G S+  ++ +  ++ YAK  ++ 
Sbjct: 216 QDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVE 275

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F +   +D V +TAM+ GY  N     + ++F+  + + +  N  ++  V+ AS 
Sbjct: 276 DARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASA 335

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            ++    G  +H  GVK+G +    + + NA++++Y +C    +A  +F  I   DVV+W
Sbjct: 336 QLRHLPLGRSVHAIGVKLGTMES--DVVRNALVDMYAKCQALPEANSIFGRILIKDVVAW 393

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  +A   +     E+  LF  +R      +  +++N LS+      L  GK    +  K
Sbjct: 394 NSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIK 453

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
             FM  + +  AL+++Y KC  +  A+ +F+ +  ++SV+W++MI GY   G    ++D+
Sbjct: 454 YAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDL 513

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTY 422
           F  ML+ ++ PN     SIL A S++  +    +    + +  F +  SM   +C++   
Sbjct: 514 FNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARH-FNITPSMKHYACMVDVM 572

Query: 423 GKCNALNESKRVLSEIDKKNAVHI 446
            +   L E+   +  +  K  + +
Sbjct: 573 ARAGNLEEALEFIQNMPIKAGISV 596



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 167/361 (46%), Gaps = 13/361 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  +IK G   +  +S +L+  + K      A R   + +  DI+ + A+I G  +  +
Sbjct: 245 IHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKR 304

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              AL+LF   ++  + P++ T ++++ A   L+   +   VH + +KLG      + + 
Sbjct: 305 PLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNA 364

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK   +  A   F   L  D VA+ +M+ GY  NG  ++S  +F  MR  G+  +
Sbjct: 365 LVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPD 424

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             S+   L A     D+  G+  H + +K  F+S +  ++N A++NLY +C     A ++
Sbjct: 425 AISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNI--YVNTALLNLYSKCADLPSAQRV 482

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+++T+ + V+WS  I       D   +  LF ++   +   NE    ++LS+     ++
Sbjct: 483 FNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMV 542

Query: 293 RAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIA 350
            AGK+   +          +     ++ +  + G + +A      +  K  +S W S + 
Sbjct: 543 TAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLH 602

Query: 351 G 351
           G
Sbjct: 603 G 603


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 184/610 (30%), Positives = 315/610 (51%), Gaps = 38/610 (6%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV--RCGQKLDAVKMFDE 238
            L ++L     + + +Q+H   +K G  +     L N +M        G    A ++FDE
Sbjct: 20  PLISLLETCESMDQLQQVHCQAIKKGLNANPV--LQNRVMTFCCTHEYGDFQYARRLFDE 77

Query: 239 ITEPDVVSWSERIA--AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I EP++  W+  I   +  D  +    L+ ++     + + YT   L      +  L  G
Sbjct: 78  IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 137

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +Q+     K G    V +  AL+ MY  CGQ++ AR +FD     D ++WN +I+ Y++ 
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 197

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI----IKSGFLLD 411
           G F ++  +F  M +  ++P   T+  +L A S  K L+   +VHS++    ++S  +L+
Sbjct: 198 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 257

Query: 412 DSMI---------------------------SCLITTYGKCNALNESKRVLSEIDKKNAV 444
           ++MI                           + +++ +     ++ ++    ++ +K+ V
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
              A+    + ++   EALEL+R +  +  + +  T   VL ACA +  LE G+ I    
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
            + +   D+FV +A+IDMY KCG ++ A+  FR++ +     W AM++G A +G   +  
Sbjct: 378 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKAL 437

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           ++F+ M K  + PDEITY+ VL++C H GLV + R Y   M+  HG+ P + HY C+VDL
Sbjct: 438 DMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDL 497

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           L R G L+ A   I+ MPI  ++ +W +LL+ C +Y   D+  +   ++LEL+PDN + Y
Sbjct: 498 LARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVY 557

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           VLL N+YA+   WND+ +LR+ M +K + K PG S I + G  H F AGD SH Q+K I 
Sbjct: 558 VLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNID 617

Query: 745 KELIKLYEHM 754
            +L K+ + +
Sbjct: 618 AKLDKMTQDL 627



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/546 (24%), Positives = 256/546 (46%), Gaps = 56/546 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++   IK G + +P+L   +++     ++ DF+ A R   +    ++  +N +I G +R
Sbjct: 36  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR 95

Query: 59  --FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
             F Q G +L L + LR +G++PD +TF  L K      +L+    +HG  LK G    V
Sbjct: 96  LDFPQLGVSLYL-EMLR-RGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNV 153

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  ++ Y   G++ +A   F  C   D + +  ++  Y   G+F++S+ +F+ M   
Sbjct: 154 FVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK 213

Query: 174 GLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +     +L  VL A     D++ G+++H +       S +   L NA++++Y  CG+  
Sbjct: 214 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV--LENAMIDMYADCGEMD 271

Query: 231 DAVKMFDEITEPDVVSWSERIA---------------------------AACDGV----- 258
            A+ +F  +   D++SW+  ++                           A  DG      
Sbjct: 272 SALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 331

Query: 259 --EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             EA  LF++++  + + +E+TM+++L++      L  G+ I+ +  +      + + NA
Sbjct: 332 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 391

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI MY KCG V+ A SIF  +  +D  +W +MI G + NG   +ALDMF +ML+ S++P+
Sbjct: 392 LIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPD 451

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHII-KSGFLLDDSMISCLITTYGKCNALNESKRVL 435
             T   +L A +++  + +  +    +  + G   + +   CL+    +   L E+  V+
Sbjct: 452 EITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVI 511

Query: 436 SEID-KKNAVHINA-LASVLVYASCHAEALELYRTIWGSCREVNGSTFSI---VLKACAA 490
             +  K N++   A LA   VY       + + + +       NG+ + +   +  AC  
Sbjct: 512 ENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL--ELEPDNGAVYVLLCNIYAACKR 569

Query: 491 MTDLEQ 496
             DL +
Sbjct: 570 WNDLRE 575


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/510 (33%), Positives = 275/510 (53%), Gaps = 3/510 (0%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A KMFD++ + DV  W+  I    D     EA  L+ ++       + YT   ++ S   
Sbjct: 81  ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              LR GK++     K GF   V + ++L++MY + G+      +F  ++ ++ VSW ++
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY +N +F + L +F  M+     PN  T+ S+L A +  + L     +H + IK G 
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D S+ + LI  YGKC  +  ++ +   +  +N V  NA+ +     +  A A++L+R 
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +     + +  T   V+ ACA++  L  G+ +H L  +   + ++ + +A+IDMY KCG 
Sbjct: 321 MQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I+ A+  F ++   S+  W +M+   A HG   +   LF++M   GVKP+  T+ AV T+
Sbjct: 381 IDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTA 440

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GLV E R +   M   + ++P +EH AC+VDLLGR G L  A   ID+MP+ PD  
Sbjct: 441 CRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVS 500

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W +LL +C I+ N++L  L   KL  L P   + YVL+SN+YA AG W D  +LRK M+
Sbjct: 501 VWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLME 560

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
           E+ L K PG+S + V    H F +G  S S
Sbjct: 561 ERELKKIPGHSLVEVNRRFHTFLSGSRSQS 590



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 235/457 (51%), Gaps = 13/457 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I++L++ NG   + +LST LI      A      R +FD    RD+  +N LI G A  
Sbjct: 47  RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADA 106

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
                AL L+  +   GL PD +TF  +V++C    +L+E + VH   +K GF S V++ 
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQ 166

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y++SGE +  E+ F + +  + V++TA++ GYV N  F +   VF EM   G +
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQ 226

Query: 177 LNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +L +VL A   ++    G+ IHG+G+K+G    V   L NA++ LY +CG    A 
Sbjct: 227 PNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDV--SLTNALIALYGKCGNVETAR 284

Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD +   ++VSW+  IAA      G  A  LF+ ++      +  TM++++S+     
Sbjct: 285 SLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLG 344

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G+ +     + G    VSI NALI MY KCG ++ AR +F+ L  +  VSW SMI 
Sbjct: 345 ALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIG 404

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
             + +G    AL +F  M +  + PN +T A++  A  +S  +++  +    +++   ++
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIM 464

Query: 411 DD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
                 +C++   G+  +L E+   + ++  +  V +
Sbjct: 465 PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSV 501



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 244/519 (47%), Gaps = 21/519 (4%)

Query: 83  TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS-AEMCFRDCLD 141
           +F+ L+  C SL +   +H + +  G    + L +  I         +  A   F     
Sbjct: 31  SFNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPK 90

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT------AVLGASFDVKEG 195
            D   +  ++ GY   G  +++  ++  M   GL  + ++        AVL A   ++EG
Sbjct: 91  RDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSA---LREG 147

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
           +++H   VK GF S V   + ++++ +Y + G+ L    +F E+   ++VSW+  IA   
Sbjct: 148 KEVHCNIVKHGFDSDV--FVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYV 205

Query: 256 DG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 E  G+F+++  +  Q N  T++++L +  G   L  GK I  +  K+G    VS
Sbjct: 206 QNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVS 265

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + NALI++YGKCG V  ARS+FD ++ ++ VSWN+MIA Y +N     A+ +F  M    
Sbjct: 266 LTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEK 325

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           +  +  TM S++ A ++  +L     +H  + + G  ++ S+ + LI  Y KC  ++ ++
Sbjct: 326 VDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAR 385

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            V   +  ++ V   ++           +AL+L+  +     + N  TF+ V  AC    
Sbjct: 386 EVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSG 445

Query: 493 DLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNA 549
            +E+G+  H  ++   Y     VE  + ++D+  + G++ +A     K+     ++ W A
Sbjct: 446 LVEEGRK-HFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGA 504

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++     H        +  K+  F + P  +T+  ++++
Sbjct: 505 LLGSCRIHSNLELAELVAEKL--FLLDPQTVTFYVLMSN 541



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 137/275 (49%), Gaps = 21/275 (7%)

Query: 392 SLKQAMQVHSHIIKSG----FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           SL    ++H+ ++ +G     LL   +I   IT       ++ ++++  ++ K++    N
Sbjct: 41  SLPDLSRIHALVVTNGCGQNLLLSTKLI---ITACCLAPTMDYARKMFDQMPKRDVFLWN 97

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
            L      A    EAL LY  + G+    +  TF  V+++CA ++ L +GK +HC  +K 
Sbjct: 98  TLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKH 157

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            +D D+FV+S+++ MY + G     +  F ++   ++  W A++ GY Q+  + E   +F
Sbjct: 158 GFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVF 217

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACI 621
            +M   G +P+ +T ++VL +C  AGL      +L+    +H      G+ P +     +
Sbjct: 218 REMVGSGTQPNAVTLVSVLPAC--AGL-----EFLNLGKLIHGYGIKLGVDPDVSLTNAL 270

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           + L G+ G +E A+   D M +  +   W ++++A
Sbjct: 271 IALYGKCGNVETARSLFDGM-VVQNLVSWNAMIAA 304


>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/537 (32%), Positives = 300/537 (55%), Gaps = 16/537 (2%)

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           AS+D+  G Q+H   +++GF S V  H+ +A++++Y +C +   A ++F+E+ E + V+W
Sbjct: 83  ASYDL--GIQLHSTIIRMGFTSNV--HICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTW 138

Query: 248 SERIAAACDGVEAFGLFKDLRFNDFQ-INEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           +  I         FG    +     + +  +++   L       +   G Q+     K+G
Sbjct: 139 NSLI---------FGYLNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVHGLSLKLG 189

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F   V +G ALI MY KC  V+D+  +FDY++ K+ V+W +M+  Y++N   ++A+ +  
Sbjct: 190 FDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVR 249

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC- 425
            M+   +  N  T  S+L + S  K ++   QVH  II+ G   +  + + L+T Y KC 
Sbjct: 250 EMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCT 309

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
           N L +  ++ S +   + +  NA+ +         +AL+ +  +  +  +++  TF+ +L
Sbjct: 310 NNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLL 369

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            A  A   +E+G+ +H L +K  Y   ++V++ ++ MY +CG I+D+KR F  +    + 
Sbjct: 370 GAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVV 429

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            WNA++ G A HG  +E   LF +M K  +KP+  T+LAVL++C H G V +   Y   M
Sbjct: 430 SWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFM 489

Query: 606 SDLHGLIP-QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
                L P ++EHYA +VD+ GR G L  A+  I+ MP+ P   ++++LLSAC ++GN +
Sbjct: 490 RSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNRE 549

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           + + +  KLLEL PD+ +TY+LLSN+ A+ G W+D   +RK M ++ + K PGYSWI
Sbjct: 550 IAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 245/474 (51%), Gaps = 33/474 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S +I+ G   +  + + ++  + K ++ + A     +   R+ +T+N+LI G     
Sbjct: 90  QLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGY---- 145

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                L +      +G+   +F+ S+ +  C  L+       VHG+ LKLGF + V++ +
Sbjct: 146 -----LNVMPTCAMRGVT--SFSVSTCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGT 198

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y+K   +  +   F   +D + V +TAMV  Y  N + D++  +  EM  LG++ 
Sbjct: 199 ALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKA 258

Query: 178 NEFSLTAVLGASFD----VKEGEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKL-D 231
           N  +  ++L +SF     ++  +Q+H   ++ G     CN ++   ++ +Y +C   L D
Sbjct: 259 NYVTYNSLL-SSFSGPKYMQYCKQVHCSIIRCGL---ECNLYIAATLVTVYSKCTNNLED 314

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+   +   D +SW+  IA   +   G +A   F ++R  + +++ YT  +LL ++G 
Sbjct: 315 FNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGA 374

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              +  G+++ A   K G+   V + N L+SMY +CG ++D++ +F  +   D VSWN++
Sbjct: 375 FLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNAL 434

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           + G + +GF N+A+++F  M +  + PN  T  ++L A S+  S+ + ++ +   ++S  
Sbjct: 435 LTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLE-YFDFMRSDI 493

Query: 409 LLDDSMI---SCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYAS 457
            L+   +   + ++  +G+   L+E++ +++   +D   +V+   L++ LV+ +
Sbjct: 494 SLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGN 547


>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 187/559 (33%), Positives = 291/559 (52%), Gaps = 37/559 (6%)

Query: 235 MFDEITEPDVVSWSERIAA-ACDGVEAFGLFKDLRF--NDFQINEYTMINLLSSVGGERI 291
           + D+   P   SW+  I A    G     LF  L+   +  + + +T   +L +      
Sbjct: 49  VLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGS 108

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+QI     ++GF   + + N+LI MY KC +++ AR+ +D + F+D VSWNS+I+G
Sbjct: 109 VLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISG 168

Query: 352 YSENGFFNQALDMF-------------------------CHMLEF---------SLIPNG 377
           Y + G   +A D+F                           ML            + PN 
Sbjct: 169 YVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNA 228

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM  +L A S   + +    +   I  +   L+  +++ LI  Y KC  + ++ R+   
Sbjct: 229 ATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDG 288

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           +  KN    NA+ +  V      EA++LYR +     + N  T   VL ACA +  LE G
Sbjct: 289 VSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELG 348

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + +H    +   D ++ + +A++DMY KCG I+DA   F K     +A WNAM++G A H
Sbjct: 349 REVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYH 408

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   +   +F++M + GV+P+++T++ VL++C H+GLV E R   S M+D HGL P+LEH
Sbjct: 409 GDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEH 468

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC+VDLLGR G L+ A   +  M IPPD+ IW +LLSAC I+ N++L       ++  Q
Sbjct: 469 YACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQ 528

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
             N    +LLSN+YAS+G W DV ++R+++KEK + K  G SW+ V G  H F   D++H
Sbjct: 529 DPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTH 588

Query: 738 SQSKEIYKELIKLYEHMVA 756
            +S EIY     L  H+ A
Sbjct: 589 LKSGEIYGAYEILVNHLKA 607



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 213/470 (45%), Gaps = 54/470 (11%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           L T LI           A RF+ D T +    ++N+LI           +L L+ ++   
Sbjct: 29  LQTHLIPKLIDLHSIDYA-RFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRS 87

Query: 76  GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
             +P  FTF  ++KAC   GS+ E E +H   L+LGF S +++ +  I+ Y K   + SA
Sbjct: 88  STKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSA 147

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
              + D    D V++ +++ GYV  G+ +K++++F EM    +  N    TA++      
Sbjct: 148 RNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEM---PMRRNVVCWTAMINGYG-- 202

Query: 193 KEGEQIHGFGVKVGFL--------------------SGVCNH------------------ 214
           KEG+ +    +    L                    S +CN+                  
Sbjct: 203 KEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLN 262

Query: 215 --LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRF 269
             L  A++++Y +CG    A ++FD ++  ++ SW+  I     G    EA  L++ ++ 
Sbjct: 263 TILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKA 322

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              + NE T++N+LS+  G   L  G+++  +  + G    V +  AL+ MY KCG+++D
Sbjct: 323 QSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDD 382

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A  IF     KD   WN+MI G + +G    +L +F  M+   + PN  T   +L A ++
Sbjct: 383 ACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNH 442

Query: 390 SKSLKQA-MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           S  +++  +Q  S   K G        +C++   G+   L E+  ++  +
Sbjct: 443 SGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNM 492



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 227/507 (44%), Gaps = 46/507 (9%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           SL++   SL +   +H   L  G   + +L+   I+ ++    I  A           + 
Sbjct: 4   SLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDF 59

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFG 202
           ++ +++  Y  +G    S  ++++M     + + F+   VL A      V EGEQIH   
Sbjct: 60  SWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHV 119

Query: 203 VKVGFLSG--VCNHLN---------------------------NAIMNLYVRCGQKLDAV 233
           +++GF S   VCN L                            N+I++ YV+ GQ   A 
Sbjct: 120 LRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKAR 179

Query: 234 KMFDEIT-EPDVVSWSERI---AAACDGVEAFGLFKDLRF--NDFQINEYTMINLLSSVG 287
            +F+E+    +VV W+  I       D VE   LF+ +    ++ Q N  TM+ LLS+  
Sbjct: 180 DLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACS 239

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                  G+ +  F           +  ALI MY KCG V  A  IFD +  K+  SWN+
Sbjct: 240 TLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNA 299

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I G  + G   +A+D++ HM   S+ PN  T+ ++L A +   +L+   +VH ++ ++G
Sbjct: 300 IITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNG 359

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             L+  + + L+  Y KC  ++++  +  +  +K+    NA+   L Y     ++L ++ 
Sbjct: 360 LDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFS 419

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVESAVIDMYCKC 526
            +  +  + N  TF  VL AC     +E+G+     +A K      +   + ++D+  + 
Sbjct: 420 QMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRA 479

Query: 527 GTIEDAKRAFRK--ICRDSLAGWNAMM 551
           G +++A    +   I  DS+  W A++
Sbjct: 480 GHLKEAYELVQNMLIPPDSII-WGALL 505



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 183/398 (45%), Gaps = 45/398 (11%)

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++ AR + D        SWNS+I  Y+ +G    +L ++  ML  S  P+ +T   +L+A
Sbjct: 43  IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            S   S+ +  Q+H+H+++ GF  D  + + LI  Y KC  L+ ++    ++  ++ V  
Sbjct: 103 CSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSW 162

Query: 447 NALAS-----------------------VLVYASC---------HAEALELYRTIWGSCR 474
           N++ S                       V+ + +            E L L+R +  S  
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222

Query: 475 EV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
           EV  N +T   +L AC+ + + E G+ +       +   +  + +A+IDMY KCG +E A
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKA 282

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            R F  +   +L  WNA++ G  Q G   E  +L+  M    VKP+EIT + VL++C   
Sbjct: 283 WRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGL 342

Query: 593 G---LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
           G   L RE   YL      +GL   +     +VD+  + G ++ A +   +     D  +
Sbjct: 343 GALELGREVHLYLG----RNGLDLNVILATALVDMYAKCGKIDDACLIFVKTS-EKDVAL 397

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYV 685
           W +++     +G+    L   S+++   +QP N+ T++
Sbjct: 398 WNAMILGLAYHGDGRDSLAVFSQMVRAGVQP-NDVTFI 434



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 51/353 (14%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L  +  + SL Q  Q+H+  +  G  L   +I  LI  +    +++ ++ VL +     
Sbjct: 2   LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLH----SIDYARFVLDQTPSPT 57

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
               N+L            +L LY  +  S  + +  TF  VLKAC+ +  + +G+ IH 
Sbjct: 58  DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117

Query: 503 LALKARYDQDIFVESAVIDMYCKC-------------------------------GTIED 531
             L+  +  D+FV +++IDMYCKC                               G +E 
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177

Query: 532 AKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM--SKFGVKPDEITYLAVLTS 588
           A+  F ++  R ++  W AM+ GY + G + E+ +LF +M  S   V+P+  T + +L++
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237

Query: 589 C---CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           C   C+     E   +LS   D++ +         ++D+  + G +E A    D +    
Sbjct: 238 CSTLCN----YEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSC-K 292

Query: 646 DAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
           +   W ++++ C   G ++  + L    K   ++P NE T  L++ L A AG+
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKP-NEIT--LVNVLSACAGL 342



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 10/249 (4%)

Query: 13  LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL 72
           L+ IL T LI  ++K  D  +A+R       +++ ++NA+I+G  +      A+ L+  +
Sbjct: 261 LNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHM 320

Query: 73  RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           + Q ++P+  T  +++ AC   G+L+    VH    + G    V L +  ++ YAK G+I
Sbjct: 321 KAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKI 380

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA- 188
             A + F    + D   + AM+ G  ++G+   S  VF +M   G++ N+ +   VL A 
Sbjct: 381 DDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSAC 440

Query: 189 --SFDVKEGE-QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE-ITEPDV 244
             S  V+EG  Q      K G LS    H    +++L  R G   +A ++    +  PD 
Sbjct: 441 NHSGLVEEGRVQFSSMADKHG-LSPKLEHY-ACMVDLLGRAGHLKEAYELVQNMLIPPDS 498

Query: 245 VSWSERIAA 253
           + W   ++A
Sbjct: 499 IIWGALLSA 507



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 5/156 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  L +NG  L+ IL+T L+  + K      A      T  +D+  +NA+I GLA   
Sbjct: 350 EVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHG 409

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI-VHGVCLKLGFSSRVYLV 116
               +L +F ++   G++P+  TF  ++ AC   G ++E  +    +  K G S ++   
Sbjct: 410 DGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHY 469

Query: 117 SGFIENYAKSGEIVSA-EMCFRDCLDLDNVAYTAMV 151
           +  ++   ++G +  A E+     +  D++ + A++
Sbjct: 470 ACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALL 505


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 192/632 (30%), Positives = 314/632 (49%), Gaps = 80/632 (12%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I ++ ++  I  A   F      D   YT M+ GY  N  FD + ++F EM    +    
Sbjct: 18  ITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV---- 73

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            S  +++   FD                                  C     A K+FDE+
Sbjct: 74  VSWNSMIKGCFD----------------------------------CADLTMARKLFDEM 99

Query: 240 TEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
            E  VVSW+                             TMIN     G   +       +
Sbjct: 100 PERSVVSWT-----------------------------TMINGFLQFGKIEV------AE 124

Query: 300 AFCYKVGFMEVVSIGNALISMYGKC--GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
              YK+ F ++ +  N++I  YG C  G+V D   +F  +  ++ +SW SMI G  ++G 
Sbjct: 125 GLFYKMPFRDIAA-WNSMI--YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGR 181

Query: 358 FNQALDMFCHMLE--FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
             +AL +F  M+     + P   T   ++ A +N+ +L Q +Q+H+H+ K G+  D  + 
Sbjct: 182 SEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYIS 241

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + LIT Y  C  + +S RV       N V   AL +       H +AL+++  +      
Sbjct: 242 AALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL 301

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N S+F+  L +C  +  L+ G+ IH  A+K   + D+FV +++I MY +CG + D    
Sbjct: 302 PNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVI 361

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F++I + ++  WN++++G AQHGC       FN+M +  V+PDEIT+  +L++C H+G+ 
Sbjct: 362 FKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMS 421

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
           ++ R      S+      +L+HYAC+VD+LGR G LE A+  I  MP+  ++ +W  LLS
Sbjct: 422 QKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLS 481

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           ACT++  +++   A   +++L+P   S YVLLSNLYASA  W+DV ++R+EMK++ + K+
Sbjct: 482 ACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQ 541

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           PG SWI + G+ + F +GD SH  S  IY++L
Sbjct: 542 PGRSWITIKGWRNEFLSGDRSHPSSDRIYQKL 573



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/594 (22%), Positives = 256/594 (43%), Gaps = 73/594 (12%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L T +I+ + +   F  A +  ++   +D++++N++I G         A KLFD + 
Sbjct: 41  DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMP 100

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            + +     ++++++       + E+  G+  K+ F   +   +  I  Y  +G +    
Sbjct: 101 ERSV----VSWTTMINGFLQFGKIEVAEGLFYKMPFRD-IAAWNSMIYGYCCNGRVEDGL 155

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS------LTAVLG 187
             F++    + +++T+M+ G   +G  +++  +F +M   G+E+   S      +TA   
Sbjct: 156 RLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACAN 215

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           AS  + +G QIH    K+G+      +++ A++  Y  C Q  D++++F      +VV W
Sbjct: 216 AS-ALYQGVQIHAHVFKLGYSFDA--YISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 272

Query: 248 SERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  +      C   +A  +F ++       N+ +  + L+S  G   L  G++I     K
Sbjct: 273 TALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVK 332

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +G    V +GN+LI MY +CG +ND   IF  +  K+ VSWNS+I G +++G    AL  
Sbjct: 333 LGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAF 392

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  M+   + P+  T   +L A S           HS + + G         CL   +  
Sbjct: 393 FNQMVRSMVEPDEITFTGLLSACS-----------HSGMSQKG--------RCLFKYF-- 431

Query: 425 CNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV 484
               +E+K    ++D     H   +  +L  +    EA EL R +     + N   + ++
Sbjct: 432 ----SENKSAEVKLD-----HYACMVDILGRSGKLEEAEELIRNM---PVKANSMVWLVL 479

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI---DMYCKCGTIEDAKRAFRKICR 541
           L AC   + LE  +     A K   D +    SA +   ++Y       D  R  R++ +
Sbjct: 480 LSACTMHSKLEVAER----AAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQ 535

Query: 542 D-----------SLAGW-NAMMMGYAQHGC----YHEVSNLFNKMSKFGVKPDE 579
                       ++ GW N  + G   H      Y ++  L  K+ + G  PD+
Sbjct: 536 RGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQ 589



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K G+  D  +S  LI+ +        + R      + +++ + AL++G    C
Sbjct: 224 QIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNC 283

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +   ALK+F  +  +G+ P+  +F+S + +C  L+       +H   +KLG  + V++ +
Sbjct: 284 KHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGN 343

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  Y + G +    + F+     + V++ +++ G   +G    +   F +M    +E 
Sbjct: 344 SLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 403

Query: 178 NEFSLTAVLGA 188
           +E + T +L A
Sbjct: 404 DEITFTGLLSA 414


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 184/596 (30%), Positives = 311/596 (52%), Gaps = 9/596 (1%)

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH---L 215
           + +++ E   EM   G+ ++ +S   +  A  +++     HG  +      G+ N    L
Sbjct: 63  KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLS--HGRLLHDRMRMGIENPSVLL 120

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDF 272
            N ++ +Y  C    DA K+FDE++E + VS +  I+A A  G+  +A GLF  +  +  
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           +        LL S+   R L  G+QI A   + G     SI   +++MY KCG +  A+ 
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +FD +  K  V+   ++ GY++ G    AL +F  ++   +  + +  + +L+A ++ + 
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L    Q+H+ + K G   + S+ + L+  Y KC++   + R   EI + N V  +A+ S 
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360

Query: 453 LVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
               S   EA++ ++++      + N  T++ + +AC+ + D   G  +H  A+K     
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
             + ESA+I MY KCG ++DA   F  +    +  W A + G+A +G   E   LF KM 
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             G+KP+ +T++AVLT+C HAGLV + +  L  M   + + P ++HY C++D+  R GLL
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A   +  MP  PDA  W+  LS C  + N++LG +AG +L +L P++ + YVL  NLY
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             AG W +  ++ K M E+ L KE   SWI   G  H F  GD  H Q++EIY++L
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKL 656



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 14/413 (3%)

Query: 38  LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GS 93
           LFD  +  + ++   +IS  A       A+ LF  +   G +P +  +++L+K+     +
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           L     +H   ++ G  S   + +G +  Y K G +V A+  F        VA T ++ G
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSG 210
           Y   G    + ++FV++ + G+E + F  + VL A   ++E   G+QIH    K+G  S 
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDL 267
           V   +   +++ Y++C     A + F EI EP+ VSWS  I+  C      EA   FK L
Sbjct: 320 V--SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377

Query: 268 RFNDFQI-NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
           R  +  I N +T  ++  +         G Q+ A   K   +      +ALI+MY KCG 
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++DA  +F+ +   D V+W + I+G++  G  ++AL +F  M+   + PN  T  ++L A
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497

Query: 387 VSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            S++  ++Q    + + + K           C+I  Y +   L+E+ + +  +
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 41/73 (56%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           + LI+ ++K      A        N DI+ + A ISG A +  +  AL+LF+++   G++
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485

Query: 79  PDAFTFSSLVKAC 91
           P++ TF +++ AC
Sbjct: 486 PNSVTFIAVLTAC 498


>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 754

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 213/699 (30%), Positives = 345/699 (49%), Gaps = 31/699 (4%)

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           P   L  RL+  GL      FS+ V   G       +H + +  G ++   + +     Y
Sbjct: 46  PLAALRGRLQ-AGLPVSPTAFSAAVARSGP-DALPALHALAVISGLAAFAPVTNSLAARY 103

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSL 182
           AK     +A   F      D  +Y  ++       + D +      M R+  +  +  + 
Sbjct: 104 AKGNSFAAAARVFAAAPSRDTSSYNTILSA---TPDPDDALAFAARMLRAGDVRPDAITF 160

Query: 183 TAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV-KMFDE 238
           T  L  +    EG    Q+H    + G  + V   + NA++  Y R G  LDA  K+F+E
Sbjct: 161 TVTLSLAAGRGEGRLVRQLHALVSRAGIAADV--FVGNALVTAYAR-GASLDAARKVFEE 217

Query: 239 ITEPDVVSWSERIAA-ACDG---VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILR 293
           +   D+VSW+  +   A DG    E   +F + L+    + +  ++ +++S+ GGE  L 
Sbjct: 218 MPARDLVSWNALVCGLAQDGECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLE 277

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+QI  F  K+G    VSI N L++MY KCG    AR +F+++  +D VSW ++++   
Sbjct: 278 LGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSMDR 337

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           E+     A+ +F  M+   + PN  T  +IL A+      ++   VH+  IK+G     +
Sbjct: 338 ED-----AVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPA 392

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
             +  IT Y K   ++++K +   +     +  NAL S         +ALE + ++    
Sbjct: 393 AANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMV-KI 451

Query: 474 REVNGSTFSIVLKACAAM--TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
            + + +TF+ +L A  A+    +  G+  HC  LK       +V  A+ID+Y K G++E+
Sbjct: 452 TKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEE 511

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           + +AF +    SL  W A++   ++HG Y  V +LFN M++ GV PD +  L+VLT+C +
Sbjct: 512 SWKAFGETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRY 571

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           +G     R     M+  HG     EHYAC+VD+LGR G LE A+  + QMP  P     Q
Sbjct: 572 SGFASLGREIFESMATKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQ 631

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           SLL AC I+GN D+G      LLE +P     YVLLSN+YA  G W  V ++R++M+   
Sbjct: 632 SLLGACRIHGNTDVGERVAGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGMG 691

Query: 712 LCKEPGYSWIHVGG-----YTHHFYAGDSSHSQSKEIYK 745
           + KE G+SW+  GG     + H F + D++H Q +EIY+
Sbjct: 692 VKKEVGFSWVDAGGANDSLHLHKFSSDDTTHPQREEIYR 730



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 244/505 (48%), Gaps = 22/505 (4%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIV 100
            +RD  +YN ++S          AL    R LR   +RPDA TF+  +       E  +V
Sbjct: 120 PSRDTSSYNTILSATP---DPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLV 176

Query: 101 ---HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
              H +  + G ++ V++ +  +  YA+   + +A   F +    D V++ A+VCG   +
Sbjct: 177 RQLHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQD 236

Query: 158 GEFDKSK-EVFVEM-RSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVC 212
           GE       VF+ M +  G+  +  S+ +V+   G    ++ G QIHGF VK+G    V 
Sbjct: 237 GECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVS 296

Query: 213 NHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDF 272
             + N ++ +Y +CG    A ++F+ + E DVVSW+  +  + D  +A  LF  +  +  
Sbjct: 297 --IANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVM--SMDREDAVSLFNGMMRDGV 352

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             NE T + +LS++ G    R G+ + A C K G  +  +  N+ I+MY K  +++DA+ 
Sbjct: 353 APNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKM 412

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           IF  +   + ++WN++I+GY++N     AL+ F  M++ +  P+  T ASIL AV+  ++
Sbjct: 413 IFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKITK-PSETTFASILSAVTAVET 471

Query: 393 LKQA--MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           +  A     H   +K G    + +   LI  Y K  +L ES +   E   ++ +   A+ 
Sbjct: 472 VSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAII 531

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           S       +   + L+  +  S    +G     VL AC        G+ I   ++  ++ 
Sbjct: 532 SANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIF-ESMATKHG 590

Query: 511 QDIFVE--SAVIDMYCKCGTIEDAK 533
            +++ E  + V+DM  + G +E+A+
Sbjct: 591 AELWPEHYACVVDMLGRAGRLEEAE 615



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 220/473 (46%), Gaps = 36/473 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L+ + G   D  +   L++ + + A    A +   +   RD++++NAL+ GLA   
Sbjct: 178 QLHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLA--- 234

Query: 61  QSG--PA--LKLFDR-LRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
           Q G  PA  +++F R L++ G+RPD  +  S++ ACG    L+    +HG  +KLG    
Sbjct: 235 QDGECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGH 294

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V + +  +  Y K G    A   F    + D V++T      V + + + +  +F  M  
Sbjct: 295 VSIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTT-----VMSMDREDAVSLFNGMMR 349

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            G+  NE +  A+L A       +EG+ +H   +K G          N+ + +Y +  + 
Sbjct: 350 DGVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAA--ANSFITMYAKLRRM 407

Query: 230 LDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLL 283
            DA  +F  +  P+V++W+  I+         D +EAF     +     + +E T  ++L
Sbjct: 408 DDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKIT----KPSETTFASIL 463

Query: 284 SSVGG-ERILRA-GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           S+V   E +  A G+       K+G      +  ALI +Y K G + ++   F   + + 
Sbjct: 464 SAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRS 523

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-H 400
            ++W ++I+  S++G ++  + +F  M    + P+G  + S+L A   S       ++  
Sbjct: 524 LIAWTAIISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFE 583

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
           S   K G  L     +C++   G+   L E++ ++ ++    +V  +A+ S+L
Sbjct: 584 SMATKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSV--SAMQSLL 634


>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 295/547 (53%), Gaps = 14/547 (2%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFND 271
           L N ++N+Y +CG    A + FDE+ E ++VSW+    R A      E F +F D+    
Sbjct: 92  LTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQHGWPDECFRVFTDMLICH 151

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK-CGQVNDA 330
            +  E+   +++S+ GG+     G+Q+ A   K  F   V +GN LI MY + CG  ++A
Sbjct: 152 -RPTEFAFASVISTSGGDG--DCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGTDEA 208

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN- 389
            ++++ + F++ VSWN MI G+   G  N+AL++F  M    +  +  T+ +I   +   
Sbjct: 209 WNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLCGM 268

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINA 448
              L+   Q+     K+GF+ +  + + L+  Y      +N+  R+  E+D +  V ++ 
Sbjct: 269 GDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDV-VSW 327

Query: 449 LASVLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
              + V+A    E A  L+R     C   +   FSIVLKACA +        +    LK 
Sbjct: 328 TGIIAVFAERDPEEAFLLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQSHVLKV 387

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
            ++ DI + +A+I    +CG++  +K+AF KI       WN+M+  YA HG   E   LF
Sbjct: 388 GFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLF 447

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           ++M     +PD  T++A++++C HAG+V E       MS+ HG++PQL+HYAC+VD+LGR
Sbjct: 448 SQMD---AQPDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMVDILGR 504

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G +  AK  ID+MP+ PD+ +W +LL  C  +G      LA  KL EL P+N   Y+L+
Sbjct: 505 AGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLAAVKLKELDPNNSLGYILM 564

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN++++ G +N+   +R+EM+ K + KEPG SWI VG   H F +G   H + + +   L
Sbjct: 565 SNIFSTNGHFNEARLIRREMERKTVRKEPGLSWIQVGNQVHEFASGGQQHPEKEALCARL 624

Query: 748 IKLYEHM 754
            +L   +
Sbjct: 625 EELVRQL 631



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 221/461 (47%), Gaps = 27/461 (5%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           ++L +  +  YAK G +  A   F + L+ + V++TA+V  Y  +G  D+   VF +M  
Sbjct: 90  LFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQHGWPDECFRVFTDML- 148

Query: 173 LGLELNEFSLTAVLGAS-FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR-CGQKL 230
           +     EF+  +V+  S  D   G Q+H   VK  F S  C ++ N ++ +Y R CG   
Sbjct: 149 ICHRPTEFAFASVISTSGGDGDCGRQVHALAVKTSFDS--CVYVGNVLIMMYCRSCGGTD 206

Query: 231 DAVKMFDEITEPDVVSWSERIAA--ACD-GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A  +++ +   ++VSW+  I     C  G  A  +F  + F   + +  T++N+ S + 
Sbjct: 207 EAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLC 266

Query: 288 G-ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFK-DSVS 344
           G    L    Q+Q    K GF+  + +   L+  Y    G+VND   IF  L  + D VS
Sbjct: 267 GMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDVVS 326

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W  +IA ++E     +A  +F   L   L P+ +  + +L+A +   +   A+ V SH++
Sbjct: 327 WTGIIAVFAERD-PEEAFLLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQSHVL 385

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K GF  D  + + LI T  +C ++  SK+   +I  ++ V  N++           EAL+
Sbjct: 386 KVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQ 445

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-----SAV 519
           L+  +     + +G+TF  ++ AC+    +E+G  I     +A  +    V      + +
Sbjct: 446 LFSQMDA---QPDGATFVALISACSHAGMVEEGAKI----FEAMSNNHGIVPQLDHYACM 498

Query: 520 IDMYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHG 558
           +D+  + G I +AK    K+    DS+  W+A++ G  +HG
Sbjct: 499 VDILGRAGRIYEAKELIDKMPMEPDSMV-WSALLGGCRKHG 538



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 200/433 (46%), Gaps = 17/433 (3%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L+  +++ + K      A ++  +   R+I+++ AL+S  A+        ++F  +    
Sbjct: 92  LTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQHGWPDECFRVFTDMLICH 151

Query: 77  LRPDAFTFSSLVKACGSLQE-NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            RP  F F+S++   G   +    VH + +K  F S VY+ +  I  Y +S         
Sbjct: 152 -RPTEFAFASVISTSGGDGDCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGTDEAWN 210

Query: 136 FRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
             + +   N V++  M+ G+   G  +++ E+F +M   G+  +  +L  +      + +
Sbjct: 211 VYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLCGMGD 270

Query: 195 GE----QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEIT-EPDVVSWS 248
           G     Q+     K GF+S +   +   ++  Y   G ++ D  ++F E+    DVVSW+
Sbjct: 271 GLECCFQLQCLTTKTGFISEI--EVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDVVSWT 328

Query: 249 ERIA--AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
             IA  A  D  EAF LF+         + +    +L +  G         +Q+   KVG
Sbjct: 329 GIIAVFAERDPEEAFLLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQSHVLKVG 388

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F + + + NALI    +CG V  ++  FD +  +D+VSWNSM+  Y+ +G   +AL +F 
Sbjct: 389 FEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLFS 448

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKC 425
            M      P+G T  +++ A S++  +++  ++   +  + G +      +C++   G+ 
Sbjct: 449 QM---DAQPDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMVDILGRA 505

Query: 426 NALNESKRVLSEI 438
             + E+K ++ ++
Sbjct: 506 GRIYEAKELIDKM 518



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 160/334 (47%), Gaps = 34/334 (10%)

Query: 44  RDIITYNALISGLARFCQSG-PALKLFDRLRYQGLRPDAFT----FSSLVKACGSLQENE 98
           R+++++N +I+G  + C  G  AL++F ++ + G+R D  T    FS L      L+   
Sbjct: 218 RNLVSWNFMITGF-QVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLCGMGDGLECCF 276

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN----VAYTAMVCGY 154
            +  +  K GF S + + +G ++ Y+  G  V+   C+R  L+LD     V++T ++  +
Sbjct: 277 QLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVND--CYRIFLELDGRQDVVSWTGIIAVF 334

Query: 155 VWNGEFDKSKEVFVEMRS-----LGLELNEFSLTAVLGASFDVKEGE--QIHGFGVKVGF 207
               E D  +E F+  R      L  + + FS+     A     EG    +    +KVGF
Sbjct: 335 ---AERDP-EEAFLLFRQFLRECLAPDRHMFSIVLKACAGL-ATEGHALTVQSHVLKVGF 389

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLF 264
              +   L NA+++   RCG    + + FD+I   D VSW+  + A      G EA  LF
Sbjct: 390 EDDIV--LTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLF 447

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGK 323
             +   D Q +  T + L+S+     ++  G +I +A     G +  +     ++ + G+
Sbjct: 448 SQM---DAQPDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMVDILGR 504

Query: 324 CGQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
            G++ +A+ + D +  + DS+ W++++ G  ++G
Sbjct: 505 AGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHG 538



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 496 QGKAIHCLAL--KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            G A+HC  L      D ++F+ + V++MY KCG ++ A + F ++   ++  W A++  
Sbjct: 71  HGPALHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSR 130

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           YAQHG   E   +F  M     +P E  + +V+++
Sbjct: 131 YAQHGWPDECFRVFTDM-LICHRPTEFAFASVIST 164



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 86/177 (48%), Gaps = 8/177 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           + S ++K G   D +L+  LI    +      + +      +RD +++N+++   A   Q
Sbjct: 380 VQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQ 439

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQEN-EIVHGVCLKLGFSSRVYLVS 117
              AL+LF ++  Q   PD  TF +L+ AC   G ++E  +I   +    G   ++   +
Sbjct: 440 GKEALQLFSQMDAQ---PDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYA 496

Query: 118 GFIENYAKSGEIVSA-EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
             ++   ++G I  A E+  +  ++ D++ ++A++ G   +GE   +K   V+++ L
Sbjct: 497 CMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLAAVKLKEL 553


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/465 (36%), Positives = 266/465 (57%), Gaps = 6/465 (1%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           ++  + +    +  G+     + N LI+MY K G +++AR++FD +  ++ VSW +MI+ 
Sbjct: 32  VQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISA 91

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS +   ++ALD    ML   + PN YT +S+L A     +L+Q   +H  I+K G   D
Sbjct: 92  YSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQ---LHGSILKVGLESD 148

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S LI TY K    +++  V +E+   + V  N++       S   E L LY+ +  
Sbjct: 149 VFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKR 208

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           +    + ST + VL+AC  +  LE G+ +H   LK  YDQD+ + +A++DMYCKCG++ED
Sbjct: 209 ADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLED 266

Query: 532 AKRAF-RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           A   F R +    +  W+ M+ G AQ+G   +   LF  M   G KP+ IT L VL +C 
Sbjct: 267 ANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACS 326

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           HAGLV +   Y   M +  G+ P  EHY CI+DLLGR G L+ A   I +M   PDA  W
Sbjct: 327 HAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTW 386

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
           + LL AC ++ N+DL + A  ++L+L P +  TY+LLSN+YA++  W DV ++R++M+ +
Sbjct: 387 RILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTR 446

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            + K+PG SWI V    H F  GD+SH + +EI +EL +L + ++
Sbjct: 447 GVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLM 491



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 245/535 (45%), Gaps = 59/535 (11%)

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           +K  + +    L  DA T+S L+K C   G++Q+  +VH      G+  + +L++  I  
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K G +  A   F +  D + V++T M+  Y  +    K+ +  + M   G+  N ++ 
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 183 TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           ++VL A   +    Q+HG  +KVG  S V   + +A+++ Y + G++ DA+ +F+E+   
Sbjct: 121 SSVLRACDGLLNLRQLHGSILKVGLESDV--FVRSALIDTYSKLGEQHDALNVFNEMITG 178

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D+V W+  I   A   DG E   L+K ++  DF  ++ T+ ++L +  G  +L  G+Q+ 
Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH 238

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFF 358
               K  + + + + NAL+ MY KCG + DA  +F  ++  KD +SW++MIAG ++NGF 
Sbjct: 239 VHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFS 296

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--IS 416
             AL +F  M      PN  T+  +L A S++  +      +   +K  F +D       
Sbjct: 297 ADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGW-YYFQSMKEHFGIDPGREHYG 355

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
           C+I   G+   L+E+ +++ E++                   H      +R + G+CR  
Sbjct: 356 CIIDLLGRAGKLDEAVKLIHEMN-------------------HEPDAVTWRILLGACRVH 396

Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
                +I   A   +  L+   A   + L      +I+  S       K   + + +R  
Sbjct: 397 KNVDLAIY--AAKEILKLDPADAGTYILL-----SNIYANSQ------KWEDVAEVRRKM 443

Query: 537 RK--ICRDSLAGW-------NAMMMGYAQHGCYHEV----SNLFNKMSKFGVKPD 578
           R   + +D    W       +A ++G   H    E+    S L  ++ + G  PD
Sbjct: 444 RTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPD 498



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 179/359 (49%), Gaps = 13/359 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +  NG+     L  TLI+ + KF     A     +  +R+++++  +IS  +    
Sbjct: 38  VHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNL 97

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           +  AL     +  +G+RP+ +T+SS+++AC  L     +HG  LK+G  S V++ S  I+
Sbjct: 98  NHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALID 157

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
            Y+K GE   A   F + +  D V + +++ G+  N + D++  ++  M+      ++ +
Sbjct: 158 TYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQST 217

Query: 182 LTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           LT+VL A      ++ G Q+H   +K  +   +   LNNA++++Y +CG   DA  +F  
Sbjct: 218 LTSVLRACTGLALLELGRQVHVHVLK--YDQDLI--LNNALLDMYCKCGSLEDANLLFTR 273

Query: 239 -ITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +TE DV+SWS  IA  A +G   +A  LF+ ++    + N  T++ +L +     ++  
Sbjct: 274 MMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVND 333

Query: 295 G-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAG 351
           G    Q+     G          +I + G+ G++++A  +   +  + D+V+W  ++  
Sbjct: 334 GWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 154/331 (46%), Gaps = 16/331 (4%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +++QA  VH H+  +G+     +I+ LI  Y K   L+E++ +  E+  +N V    + S
Sbjct: 31  AVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMIS 90

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
               ++ + +AL+    +       N  T+S VL+AC  + +L Q   +H   LK   + 
Sbjct: 91  AYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQ---LHGSILKVGLES 147

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+FV SA+ID Y K G   DA   F ++    L  WN+++ G+AQ+    E  +L+ +M 
Sbjct: 148 DVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMK 207

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
           +     D+ T  +VL +C    L+   R  ++  +     LI        ++D+  + G 
Sbjct: 208 RADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN----NALLDMYCKCGS 263

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYG-NID-LGLLAGSKLLELQPDNESTYVLLS 688
           LE A +   +M    D   W ++++     G + D L L    K    +P+      +L 
Sbjct: 264 LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPN---YITILG 320

Query: 689 NLYA--SAGMWNDVGKLRKEMKEKFLCKEPG 717
            L+A   AG+ ND     + MKE F   +PG
Sbjct: 321 VLFACSHAGLVNDGWYYFQSMKEHFGI-DPG 350



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 5/175 (2%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T+S ++K C     ++Q + +H       Y+   F+ + +I+MY K G +++A+  F ++
Sbjct: 18  TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
              ++  W  M+  Y+     H+  +    M + GV+P+  TY +VL +C   GL+   +
Sbjct: 78  PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC--DGLLNLRQ 135

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            + S +    GL   +   + ++D   ++G    A    ++M I  D  +W S++
Sbjct: 136 LHGSILKV--GLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLVVWNSII 187


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 208/685 (30%), Positives = 329/685 (48%), Gaps = 6/685 (0%)

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           Y+G+      F +L+    +L +    H   +  G  + +  V+      +    I  A 
Sbjct: 3   YRGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQAS 62

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVLGASFDV 192
           + F    + D   Y  ++  +  N     +  ++  +R S  LE + F+   V+  +  +
Sbjct: 63  LLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSL 122

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G  +H   +  GF S +   + +AI+  Y +  +   A K+FD + E D V W+  ++
Sbjct: 123 GLGLLLHAHSIVAGFGSDL--FVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVS 180

Query: 253 AACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                    EA  +F D+       +  T+  +L  V   + L  G  IQ    KVGF  
Sbjct: 181 GLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHS 240

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
              +   L  +Y KCG++  AR +F  +   D VS+N+MI+GY+ N     ++ +F  +L
Sbjct: 241 HAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELL 300

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
                 N  ++  ++        L     +H    KSG + + S+ + L T Y + N + 
Sbjct: 301 VSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIE 360

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            ++ +  E  +K+    NA+ S         +A+ L++ +       N  T + +L ACA
Sbjct: 361 SARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACA 420

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  L  GK +H L  +  ++ +IFV +A+IDMY KCG+I +A+R F  +   +   WNA
Sbjct: 421 QLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNA 480

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ GY  HG  HE  NLFN+M    V P  +T+L+VL +C HAGLVRE       M   H
Sbjct: 481 MISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDH 540

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G  P  EHYAC+VDLLGR G L+ A   I +MP+ P   +W +LL AC I+ + +L  LA
Sbjct: 541 GFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLA 600

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
             KL EL P N   YVLLSN+Y++   + +   +R  +K + L K PG + I V    H 
Sbjct: 601 SDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHI 660

Query: 730 FYAGDSSHSQSKEIYKELIKLYEHM 754
           F +GD SH Q+  IY  L KL   M
Sbjct: 661 FTSGDQSHPQATAIYAMLEKLTGKM 685



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 163/605 (26%), Positives = 281/605 (46%), Gaps = 19/605 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ +I NG H D +  T L    +      +A        N D+  YN LI   +   
Sbjct: 28  QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
               A+ L+  LR    L PD FT++ ++    SL    ++H   +  GF S +++ S  
Sbjct: 88  SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFGSDLFVGSAI 147

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y K   + +A   F   L+ D V +  MV G V N  FD++  +F +M   G+  + 
Sbjct: 148 VACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDS 207

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++ AVL    ++++   G  I    +KVGF S    ++   +  LY +CG+   A  +F
Sbjct: 208 TTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHA--YVITGLACLYSKCGEIETARLLF 265

Query: 237 DEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            +I +PD+VS++  I+   C+     +  LFK+L  +  ++N  +++ L+        L 
Sbjct: 266 GQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLH 325

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
             + I  FC K G +   S+  AL ++Y +  ++  AR +FD    K   SWN+MI+GY+
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG   +A+ +F  M +  + PN  T+ SIL A +   +L     VH  I +  F  +  
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIF 445

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + LI  Y KC ++ E++R+ S + +KNAV  NA+ S         EAL L+  +  S 
Sbjct: 446 VSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSR 505

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAI-HCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
               G TF  VL AC+    + +G  I   +     ++      + ++D+  + G ++ A
Sbjct: 506 VSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKA 565

Query: 533 KRAFRKI-CRDSLAGWNAMMMGYAQHGCY-HEVSNLFNKMSK--FGVKPDEITYLAVLTS 588
               RK+        W A++       C  H+ +NL    S   F + P  + Y  +L++
Sbjct: 566 LDFIRKMPVEPGPPVWGALL-----GACMIHKDANLARLASDKLFELDPQNVGYYVLLSN 620

Query: 589 CCHAG 593
              AG
Sbjct: 621 IYSAG 625


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/588 (30%), Positives = 291/588 (49%), Gaps = 53/588 (9%)

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINE 276
           +N  V+ G+  DA+ +FD +   +VV+W+  ++          A  +F D+  +    N+
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +     L +      LRAG+Q+ +   + GF     IG+ LI MY +CG +  A+ +FD 
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL------------ 384
           +   D V + S+I+ +  NG F  A +    ML+  L PN +TM +IL            
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234

Query: 385 ---------------------------EAVSNSK-----------SLKQAMQVHSHIIKS 406
                                      E V  ++           S+    Q+H   IK 
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKH 294

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
             + D  + + L++ YG+   + E + +L++I+  + V      S         +A+ L 
Sbjct: 295 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALL 354

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             +       NG  FS VL +CA +  L+QG   HCLALK   D +I   +A+I+MY KC
Sbjct: 355 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 414

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G +  A+ AF  +    +  WN+++ G+AQHG  ++   +F+KM   G+KPD+ T+L VL
Sbjct: 415 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 474

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
             C H+G+V E   +   M D +   P   HYAC++D+LGR G  + A   I+ MP  PD
Sbjct: 475 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 534

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
           A IW++LL++C ++ N+D+G LA  +L+EL   + ++YVL+SN+YA  G W D  K+R+ 
Sbjct: 535 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 594

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           M E  + K+ G SWI +    H F + D SH  S  IY+ L +L   M
Sbjct: 595 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVM 642



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 221/484 (45%), Gaps = 60/484 (12%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D +L    ++   K      A         ++++ + +++SG  R  +   AL +F  + 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMV 106

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+ P+ F  ++ + AC   G+L+  E VH + ++ GF+   ++ S  IE Y++ G + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
           +A+  F      D V YT+++  +  NGEF+ + E  ++M   GL+ NE ++T +L A  
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 191 DVKEGEQIHGFGVK-VGFLS------------------------------GVCN------ 213
            V  G+QIHG+ +K +G  S                              G C       
Sbjct: 227 RVL-GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGR 285

Query: 214 ---------------HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
                           ++NA++++Y R G   +   M ++I  PD+VSW+  I+A     
Sbjct: 286 QLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNG 345

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
            G +A  L   +    F  N Y   ++LSS      L  G Q      K+G    +  GN
Sbjct: 346 FGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGN 405

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI+MY KCGQ+  AR  FD +   D  SWNS+I G++++G  N+AL++F  M    + P
Sbjct: 406 ALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKP 465

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRV 434
           +  T   +L   ++S  +++       +I    F    S  +C+I   G+    +E+ R+
Sbjct: 466 DDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRM 525

Query: 435 LSEI 438
           ++++
Sbjct: 526 INDM 529



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q + L +K G   +      LI+ ++K      A R  FD     D+ ++N+LI G A+ 
Sbjct: 387 QFHCLALKLGCDSEICTGNALINMYSKCGQMGSA-RLAFDVMHTHDVTSWNSLIHGHAQH 445

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
             +  AL++F ++R  G++PD  TF  ++  C   G ++E E+
Sbjct: 446 GDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGEL 488


>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 200/669 (29%), Positives = 344/669 (51%), Gaps = 32/669 (4%)

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKA--------------CGSLQENEI--VHGVCLKL 107
           P L LF  L    ++P+  TFS L+KA              C   ++ E   +    +K 
Sbjct: 33  PPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKW 92

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           GF   +Y+ + F++ Y+K G + +A+  F D  + D V++ A++ GY   G    + ++F
Sbjct: 93  GFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLF 152

Query: 168 VEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           VEMR    +  + +L +++   G      +G+ IHG GVK G    + + + NA++++Y 
Sbjct: 153 VEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGL--DLDSQVKNALVSMYG 210

Query: 225 RCGQKLDAVKM-FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMI 280
           +C   LD VK+ F EITE  VVSW+  I A   +G+  EA  +FK +       N  TM+
Sbjct: 211 KCAD-LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMV 269

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++LS+            I  +  K+G +E VS+  +L+  Y KCG +  A  I+   + K
Sbjct: 270 SILSANANTGC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKK 323

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + V+  ++I+ Y+E G     + ++  +    +  +   M  I++  +    +   +  H
Sbjct: 324 NLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFH 383

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + +KSG ++D  + +  I+ Y K + ++    +  E+ KK     N++ S    A    
Sbjct: 384 GYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSI 443

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +A+ L+  +  S    +  T + +L AC    +L  G+ +HC  L+   D + FV +A++
Sbjct: 444 DAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALV 503

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG ++ A+  F+ +    LA WN+++ GY   G ++     + +M + G+KP++I
Sbjct: 504 DMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKI 563

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+  +L +C H GLV E R Y   M    G++P+ +H A +V +LGR GL E A + I  
Sbjct: 564 TFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQN 623

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           M   PD+ +W +LLSAC I+  + LG     KL      N   +VL+SNLYA++  WNDV
Sbjct: 624 METNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCSNGGFFVLMSNLYAASRRWNDV 683

Query: 701 GKLRKEMKE 709
            ++RK M+E
Sbjct: 684 ARIRKMMRE 692



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 228/504 (45%), Gaps = 11/504 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ +  IK G      +ST  +  ++K    + A R   D   +D++++NALISG  R  
Sbjct: 84  QLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCG 143

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
            S  A KLF  +R +   P   T  SL+ +CG+ Q   + + +HG+ +K G      + +
Sbjct: 144 NSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKN 203

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K  ++   ++ F +  +   V++  M+  +  NG F ++  VF +M    +  
Sbjct: 204 ALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNA 263

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           N  ++ ++L A+ +      IH +  K+G +  V   +  +++  YV+CG    A  ++ 
Sbjct: 264 NSVTMVSILSANANTG---CIHCYATKIGLVENV--SVVTSLVCSYVKCGYIELAELIYM 318

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              + ++V+ +  I   A   D      L+  ++  D +++   M+ ++        +  
Sbjct: 319 SKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGI 378

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G     +  K G +    + N  ISMY K   ++   S+F  +  K   SWNS+I+  ++
Sbjct: 379 GLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQ 438

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            G    A+ +F  M      P+  T+AS+L A   + +L     +H +I+++   L+  +
Sbjct: 439 AGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFV 498

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y KC  ++ ++ V   + +      N+L S       H  AL  Y  +     
Sbjct: 499 GTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGI 558

Query: 475 EVNGSTFSIVLKACAAMTDLEQGK 498
           + N  TFS +L AC     +E+G+
Sbjct: 559 KPNKITFSGILAACTHGGLVEEGR 582



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 16/254 (6%)

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM-----------TDLEQGKA--I 500
           V   C    L L+R +     + N STFS+++KA               ++ E+ +A  +
Sbjct: 26  VEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQL 85

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
               +K  +DQ ++V +A +D+Y K G ++ A+R F       +  WNA++ GY + G  
Sbjct: 86  QTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNS 145

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
           H+   LF +M +    P + T ++++ SC    L  + ++ +  +    GL    +    
Sbjct: 146 HDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKS-IHGLGVKAGLDLDSQVKNA 204

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           +V + G+   L+G K+   ++        W +++ A    G     +L   ++LE +  N
Sbjct: 205 LVSMYGKCADLDGVKLLFGEIT-EKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLE-ESVN 262

Query: 681 ESTYVLLSNLYASA 694
            ++  ++S L A+A
Sbjct: 263 ANSVTMVSILSANA 276


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 170/506 (33%), Positives = 271/506 (53%), Gaps = 32/506 (6%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            L+ S    R+L+ GK++       GF+  + I N L+ MY KC  + D++ +FD +  +
Sbjct: 75  TLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPER 134

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLE-----FSLIPNGYT----------MASILE 385
           D  SWN +I+GY++ G   +A  +F  M E     ++ + +GY           +  +++
Sbjct: 135 DLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMK 194

Query: 386 AVSNSKS-----------------LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
              NSKS                 L+   ++H +I+++G   D+ + S L   YGKC ++
Sbjct: 195 RSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSI 254

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            E++ +  ++  ++ V   A+           E  +L+  +  S    N  TFS VL AC
Sbjct: 255 EEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNAC 314

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A  T  E GK +H    +  +D   F  SA++ MY KCG +  A+R F++  +  L  W 
Sbjct: 315 ANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWT 374

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ GYAQ+G   E    F  + K G +PD IT++ VL++C HAGLV +   Y   + + 
Sbjct: 375 SLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQ 434

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           +GL    +HYACI+DLL R G  + A+  I +M + PD  +W SLL  C I+GN+ L   
Sbjct: 435 YGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQR 494

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           A   L E++P+N +TYV L+N+YA+AGMW++V K+RK M ++ + K+PG SWI +    H
Sbjct: 495 AAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVH 554

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHM 754
            F  GD SH +SKEI + L KL + M
Sbjct: 555 VFLVGDDSHPKSKEINEFLGKLSKRM 580



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 216/450 (48%), Gaps = 36/450 (8%)

Query: 19  TTLISHFTKFADF-------------RRAFRFLFDTQNRDIITYNALISGL--ARFCQSG 63
           TTL+ H      F             + A + L          Y+ LI     +R  Q G
Sbjct: 30  TTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQG 89

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
              K+   ++  G  P  F  + L++    C SL +++ +     +    S   L+SG  
Sbjct: 90  K--KVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISG-- 145

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNE 179
             YAK G +  A+  F    + DN ++TAM+ GYV +   +++ E+F  M RS   + N+
Sbjct: 146 --YAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNK 203

Query: 180 FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F++++ L A+  V   + G++IHG+ ++ G  S     + +A+ ++Y +CG   +A  +F
Sbjct: 204 FTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEV--VWSALSDMYGKCGSIEEARHIF 261

Query: 237 DEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D++ + D+V+W+   +R        E F LF DL  +  + NE+T   +L++   +    
Sbjct: 262 DKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEE 321

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            GK++  +  +VGF       +AL+ MY KCG +  A  +F      D  SW S+IAGY+
Sbjct: 322 LGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYA 381

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG  ++A+  F  +++    P+  T   +L A +++  + + +  + H IK  + L  +
Sbjct: 382 QNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLD-YFHSIKEQYGLTHT 440

Query: 414 M--ISCLITTYGKCNALNESKRVLSEIDKK 441
               +C+I    +    +E++ ++S++  K
Sbjct: 441 ADHYACIIDLLARSGQFDEAENIISKMSMK 470



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 202/454 (44%), Gaps = 42/454 (9%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +++G+++H      GF+ G+   + N ++ +Y +C   +D+ K+FDE+ E D+ SW+  I
Sbjct: 86  LQQGKKVHQHIKLSGFVPGL--FILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILI 143

Query: 252 A---------------------------AACDGV-------EAFGLFKDLRFND-FQINE 276
           +                           A   G        EA  LF+ ++ +D  + N+
Sbjct: 144 SGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNK 203

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +T+ + L++      LR GK+I  +  + G      + +AL  MYGKCG + +AR IFD 
Sbjct: 204 FTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDK 263

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           ++ +D V+W +MI  Y ++G   +  D+F  +L   + PN +T + +L A +N  S +  
Sbjct: 264 MVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELG 323

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            +VH ++ + GF       S L+  Y KC  +  ++RV  E  + +     +L +     
Sbjct: 324 KKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQN 383

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFV 515
               EA+  +  +  S  + +  TF  VL ACA    +++G    H +  +         
Sbjct: 384 GQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADH 443

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
            + +ID+  + G  ++A+    K+  +     W +++ G   HG           +  F 
Sbjct: 444 YACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEAL--FE 501

Query: 575 VKPD-EITYLAVLTSCCHAGLVREARTYLSCMSD 607
           ++P+   TY+ +      AG+  E       M D
Sbjct: 502 IEPENPATYVTLANIYATAGMWSEVAKIRKTMDD 535



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 180/401 (44%), Gaps = 46/401 (11%)

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCH---------MLEFSLIPNGYTMASILEAVSN 389
           FK +    +++     +  F++A+ + C          +L     P+    ++++++   
Sbjct: 23  FKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIK 82

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN-- 447
           S+ L+Q  +VH HI  SGF+    +++ L+  Y KC++L +S+++  E+ +++    N  
Sbjct: 83  SRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNIL 142

Query: 448 -----------------------------ALASVLVYASCHAEALELYRTIWGS-CREVN 477
                                        A+ S  V      EALEL+R +  S   + N
Sbjct: 143 ISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSN 202

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T S  L A AA+  L  GK IH   ++   D D  V SA+ DMY KCG+IE+A+  F 
Sbjct: 203 KFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFD 262

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           K+    +  W AM+  Y Q G   E  +LF  + + G++P+E T+  VL +C +      
Sbjct: 263 KMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEEL 322

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            +     M+ + G  P     + +V +  + G +  A+    + P  PD   W SL++  
Sbjct: 323 GKKVHGYMTRV-GFDPFSFAASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLIAGY 380

Query: 658 TIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGM 696
              G  D  +     L++   QPD+  T+V + +  A AG+
Sbjct: 381 AQNGQPDEAIRYFELLVKSGTQPDH-ITFVGVLSACAHAGL 420



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 18/260 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +I+  +++ G   D ++ + L   + K      A R +FD   +RDI+T+ A+I    R+
Sbjct: 224 EIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEA-RHIFDKMVDRDIVTWTAMID---RY 279

Query: 60  CQSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRV 113
            Q G       LF  L   G+RP+ FTFS ++ AC +    E+   VHG   ++GF    
Sbjct: 280 FQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS 339

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +  S  +  Y+K G +VSAE  F++    D  ++T+++ GY  NG+ D++   F  +   
Sbjct: 340 FAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKS 399

Query: 174 GLELNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           G + +  +   VL A      V +G +  H    + G L+   +H    I++L  R GQ 
Sbjct: 400 GTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYG-LTHTADHY-ACIIDLLARSGQF 457

Query: 230 LDAVKMFDEIT-EPDVVSWS 248
            +A  +  +++ +PD   W+
Sbjct: 458 DEAENIISKMSMKPDKFLWA 477


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/550 (31%), Positives = 286/550 (52%), Gaps = 36/550 (6%)

Query: 237 DEITEPDVVSWSERIAAACDGVEAFGLFKD----LRFNDFQINEYTMINLLSSVGGERIL 292
           + +   D+VS   +   A D +      K+    L   D + +      L+++    R L
Sbjct: 44  NHLNPKDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRAL 103

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+++ A      F+  V I N L+ MY KCG + DA+ +FD +  +D  SWN+MI GY
Sbjct: 104 ELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGY 163

Query: 353 SENGFFNQALDMFCHMLE-----FSLIPNGYT----------MASILEAVSNSKS----- 392
           ++ G   QA  +F  M +     ++   +GY           +  +++    S S     
Sbjct: 164 AKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTL 223

Query: 393 ------------LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
                       L+   ++H ++I++   LD+ + S L+  YGKC +L+E++ +  ++  
Sbjct: 224 SSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKD 283

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           ++ V    +           E   L+R +  S    N  TF+ VL ACA       GK +
Sbjct: 284 RDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEV 343

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H   + A YD   F  SA++ MY KCG    A+R F ++ +  L  W ++++GYAQ+G  
Sbjct: 344 HGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQP 403

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
            E  + F  + + G KPD++TY+ VL++C HAGLV +   Y   + + HGL+   +HYAC
Sbjct: 404 DEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC 463

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           ++DLL R G  + A+  ID MP+ PD  +W SLL  C I+GN++L   A   L E++P+N
Sbjct: 464 VIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPEN 523

Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
            +TY+ L+N+YA+AG+W++V  +RK+M    + K+PG SWI +    H F  GD+SH ++
Sbjct: 524 PATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKT 583

Query: 741 KEIYKELIKL 750
            +I++ L +L
Sbjct: 584 SDIHEFLGEL 593



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 208/453 (45%), Gaps = 53/453 (11%)

Query: 39  FDTQNRDIITYNALISGLARF-------CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           F    R+ +    L+S   +F       CQ     +  + L     RP A  +S+L+ AC
Sbjct: 38  FRNDKRNHLNPKDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAAC 97

Query: 92  ---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
               +L+    VH       F   V++ +  ++ YAK G +V A+M F +    D  ++ 
Sbjct: 98  VRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWN 157

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSL--------------------GLEL----------- 177
            M+ GY   G  ++++++F EM                        LEL           
Sbjct: 158 TMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSS 217

Query: 178 -NEFSLTAVLGASFDV---KEGEQIHGFGVKVGF-LSGVCNHLNNAIMNLYVRCGQKLDA 232
            N+F+L++ L AS  +   + G++IHG+ ++    L  V   + +A+++LY +CG   +A
Sbjct: 218 SNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEV---VWSALLDLYGKCGSLDEA 274

Query: 233 VKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD++ + DVVSW+  I     DG   E F LF+DL  +  + NEYT   +L++    
Sbjct: 275 RGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADH 334

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                GK++  +    G+       +AL+ MY KCG    AR +F+ +   D VSW S+I
Sbjct: 335 AAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLI 394

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGF 408
            GY++NG  ++AL  F  +L+    P+  T   +L A +++  + + ++  HS   K G 
Sbjct: 395 VGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGL 454

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           +      +C+I    +     E++ ++  +  K
Sbjct: 455 MHTADHYACVIDLLARSGRFKEAENIIDNMPVK 487



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 200/454 (44%), Gaps = 46/454 (10%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA-- 252
           G ++H       F+ GV   ++N ++++Y +CG  +DA  +FDE+   D+ SW+  I   
Sbjct: 106 GRRVHAHTKASNFVPGV--FISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGY 163

Query: 253 -------------------------AACDGV-------EAFGLFKDL-RFNDFQINEYTM 279
                                    AA  G        EA  LF+ + R      N++T+
Sbjct: 164 AKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTL 223

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            + L++      LR GK+I  +  +        + +AL+ +YGKCG +++AR IFD +  
Sbjct: 224 SSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKD 283

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +D VSW +MI    E+G   +   +F  +++  + PN YT A +L A ++  +     +V
Sbjct: 284 RDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEV 343

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H +++ +G+      IS L+  Y KC     ++RV +E+ + + V   +L          
Sbjct: 344 HGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQP 403

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESA 518
            EAL  +  +  S  + +  T+  VL AC     +++G +  H +  K          + 
Sbjct: 404 DEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC 463

Query: 519 VIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGV 575
           VID+  + G  ++A+     +  +     W +++ G   HG       L  + +K  + +
Sbjct: 464 VIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNL----ELAKRAAKALYEI 519

Query: 576 KPD-EITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +P+   TY+ +     +AGL  E       M ++
Sbjct: 520 EPENPATYITLANIYANAGLWSEVANVRKDMDNM 553



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 12/257 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           +I+  LI+   +LD ++ + L+  + K      A R +FD  ++RD++++  +I      
Sbjct: 241 EIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEA-RGIFDQMKDRDVVSWTTMIHRCFED 299

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +      LF  L   G+RP+ +TF+ ++ AC       +   VHG  +  G+    + +
Sbjct: 300 GRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAI 359

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  +  Y+K G    A   F +    D V++T+++ GY  NG+ D++   F  +   G +
Sbjct: 360 SALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTK 419

Query: 177 LNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            ++ +   VL A      V +G E  H    K G +    ++    +++L  R G+  +A
Sbjct: 420 PDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA--CVIDLLARSGRFKEA 477

Query: 233 VKMFDEIT-EPDVVSWS 248
             + D +  +PD   W+
Sbjct: 478 ENIIDNMPVKPDKFLWA 494


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/538 (31%), Positives = 286/538 (53%), Gaps = 27/538 (5%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINE 276
           N ++  ++R G   DA+ +F E+ +   VS                            ++
Sbjct: 139 NILIRSFLRAGHPEDALHLFVEMLDDTAVS---------------------------PDQ 171

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +T+ N + S      L  G+ +QA+ +K GFM    + N+LI MY  CG V  A  +F  
Sbjct: 172 HTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHT 231

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  K  ++WN+MIAGY +NG + + ++MF  MLE     +  T+ S+  A          
Sbjct: 232 VQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLG 291

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             +  +  + G L   ++ + L+  Y KC  L++++R+   +  ++ V  +A+ S    +
Sbjct: 292 QWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQS 351

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EAL ++  + G+    N  T   VL ACA +  LE GK +H    +      + + 
Sbjct: 352 DRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILG 411

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++D Y KCG I+DA +AF  +   +   W A++ G A +G   E   LF+ M +  ++
Sbjct: 412 TALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIE 471

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P ++T++ VL +C H  LV E R + + M+  +G+ P++EHY C+VDLLGR GL++ A  
Sbjct: 472 PTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQ 531

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  MPI P+A +W++LLSACT++ N+++G  A  +++ L P +   Y+LLSN YAS G 
Sbjct: 532 FIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQ 591

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           W +   +RKEMKEK + K PG S I + G    F+A DS H Q  EIY+++ ++ E++
Sbjct: 592 WKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENI 649



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 209/431 (48%), Gaps = 15/431 (3%)

Query: 33  RAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF-DRLRYQGLRPDAFTFSSLVKAC 91
           R FR L     R   +YN LI    R      AL LF + L    + PD  T ++ VK+C
Sbjct: 123 RLFR-LGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSC 181

Query: 92  GSLQENEIVHGV---CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
             + +  +  GV     K GF    ++++  I  YA  G++V+A + F        +A+ 
Sbjct: 182 SRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWN 241

Query: 149 AMVCGYVWNGEFDKSKEVF---VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKV 205
           AM+ GYV NG++ +  E+F   +E+R+   E+   S+    G   D   G+ I  +  + 
Sbjct: 242 AMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEK 301

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFG 262
           G L     +L  A++++Y +CG+   A ++FD +   DVV+WS  I+         EA  
Sbjct: 302 GMLRS--RNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALA 359

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
           +F +++  +   N+ TM+++LS+      L  GK + ++  +      V +G AL+  Y 
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYA 419

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
           KCG + DA   F+ +  +++ +W ++I G + NG   +AL++F  MLE ++ P   T   
Sbjct: 420 KCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIG 479

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEID-K 440
           +L A S+   +++  +  + + +  G         C++   G+   ++E+ + +  +  +
Sbjct: 480 VLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIE 539

Query: 441 KNAVHINALAS 451
            NAV   AL S
Sbjct: 540 PNAVVWRALLS 550



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 201/422 (47%), Gaps = 13/422 (3%)

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGF 201
           +Y  ++  ++  G  + +  +FVEM     +  ++ ++   + +     D+  G  +  +
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
             K GF+  V   + N+++++Y  CG  + A  +F  +    V++W+  IA      D  
Sbjct: 197 AFKRGFM--VDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWK 254

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           E   +FK +       +E T++++ ++ G       G+ I  +  + G +   ++  AL+
Sbjct: 255 EVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALV 314

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY KCG+++ AR +FD +  +D V+W++MI+GY+++    +AL +F  M    + PN  
Sbjct: 315 DMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDV 374

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           TM S+L A +   +L+    VHS+I +    L   + + L+  Y KC  + ++ +    +
Sbjct: 375 TMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESM 434

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             +N     AL   +       EALEL+ ++  +  E    TF  VL AC+    +E+G+
Sbjct: 435 PVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGR 494

Query: 499 AIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMMMGYA 555
             H  ++   Y     +E    ++D+  + G I++A +  R +  +  A  W A++    
Sbjct: 495 R-HFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACT 553

Query: 556 QH 557
            H
Sbjct: 554 VH 555



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/390 (21%), Positives = 166/390 (42%), Gaps = 21/390 (5%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           K G  +D  +  +LI  +    D   A       Q + +I +NA+I+G  +       ++
Sbjct: 199 KRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVE 258

Query: 68  LFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV---CLKLGFSSRVYLVSGFIENYA 124
           +F  +       D  T  S+  ACG L +  +   +     + G      L +  ++ YA
Sbjct: 259 MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYA 318

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K GE+  A   F      D VA++AM+ GY  +    ++  +F EM+   +  N+ ++ +
Sbjct: 319 KCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVS 378

Query: 185 VLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           VL A      ++ G+ +H +  +      V   L  A+++ Y +CG   DAVK F+ +  
Sbjct: 379 VLSACAVLGALETGKWVHSYIRRKDLPLTVI--LGTALVDFYAKCGCIKDAVKAFESMPV 436

Query: 242 PDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ- 297
            +  +W+  I   A+     EA  LF  +   + +  + T I +L +     ++  G++ 
Sbjct: 437 RNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRH 496

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMIAG---YS 353
             +     G    +     ++ + G+ G +++A + I +  I  ++V W ++++    + 
Sbjct: 497 FTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHK 556

Query: 354 ENGFFNQALDMF-----CHMLEFSLIPNGY 378
                 +AL        CH   + L+ N Y
Sbjct: 557 NVEIGEEALKQIVPLDPCHSGNYILLSNTY 586



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 42/90 (46%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++S + +    L  IL T L+  + K    + A +       R+  T+ ALI G+A   +
Sbjct: 395 VHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGR 454

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           S  AL+LF  +    + P   TF  ++ AC
Sbjct: 455 SREALELFSSMLEANIEPTDVTFIGVLLAC 484


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 282/548 (51%), Gaps = 5/548 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFND 271
           L N +++LY +C +  DA+ +F  I   +V SW+  +AA  +  +    +  F+ +    
Sbjct: 12  LCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQG 71

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
               E  +   LS+    R +  G+ IQ      G  E   +  AL+S+YGK G   DA 
Sbjct: 72  INPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAA 131

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           S+F  +  +D V+W++M+A Y+ NG   +AL +F  M    + PN  T+ S L+A ++  
Sbjct: 132 SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLG 191

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L+    +H  +   G      + + L+  YGKC  +  +     +I +KN V  +A+++
Sbjct: 192 DLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISA 251

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH--CLALKARY 509
                  + +A+ +   +       N +TF  VL ACAA+  L+QG+ IH     L    
Sbjct: 252 AYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGL 311

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           + D++V +A+++MY KCG +  A   F KI    L  WN+++   AQHG   +   LF +
Sbjct: 312 ESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFER 371

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M   G++P  IT+ +VL +C HAG++ + R +       HG+ P+ EH+ C+VDLLGR G
Sbjct: 372 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 431

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            +  ++  +  MP  P    W + L AC  Y N+D  + A   L +L P   + YVLLSN
Sbjct: 432 WIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSN 491

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
           +YA AG W+DV ++R+ M+     KE G SWI V    H F +GD  H +  EI+ EL +
Sbjct: 492 MYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQR 551

Query: 750 LYEHMVAT 757
           L + M A 
Sbjct: 552 LTKLMKAA 559



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 17/440 (3%)

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           +LG+    +L +  I+ Y K      A   F      +  ++T M+  +  N +FD+   
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 166 VFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFL-SGVCNH--LNNAIMNL 222
            F  M   G+   E  ++  L A  D +  E   G  +++  L +G+     +  A+++L
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAR--EITIGRSIQLAILGTGIEEESIVQTALVSL 120

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTM 279
           Y + G   DA  +F  ++  DVV+WS  +AA A +G   EA GLF+ +  +    N+ T+
Sbjct: 121 YGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTL 180

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++ L +      LR+G  +       G    V +G AL+++YGKCG++  A   F  ++ 
Sbjct: 181 VSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVE 240

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+ V+W+++ A Y+ N     A+ +   M    L PN  T  S+L+A +   +LKQ  ++
Sbjct: 241 KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRI 300

Query: 400 HS--HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           H   H++  G   D  +++ L+  Y KC  L  +  +  +I   + V  N+L +      
Sbjct: 301 HERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHG 360

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              +ALEL+  +     +    TF+ VL AC+    L+QG+  H ++     D  IF E+
Sbjct: 361 QTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK-HFVSFIG--DHGIFPEA 417

Query: 518 A----VIDMYCKCGTIEDAK 533
                ++D+  + G I D++
Sbjct: 418 EHFGCMVDLLGRAGWIVDSE 437



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 177/378 (46%), Gaps = 4/378 (1%)

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           ++G++    + N LI +Y KC + +DA ++F  +  K+  SW  M+A ++EN  F++   
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            F  ML   + P    ++  L A ++++ +     +   I+ +G   +  + + L++ YG
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           K     ++  V   +  ++ V  +A+ +         EAL L+R +       N  T   
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            L ACA++ DL  G  +H           + V +A++++Y KCG IE A  AF +I   +
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           +  W+A+   YA++    +   + ++M   G+ P+  T+++VL +C     +++ R    
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 604 CMSDL-HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
            +  L  GL   +     +V++  + G L  A    D++    D  +W SL++    +G 
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQ 361

Query: 663 ID--LGLLAGSKLLELQP 678
            +  L L    +L  LQP
Sbjct: 362 TEKALELFERMRLEGLQP 379



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 182/424 (42%), Gaps = 28/424 (6%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           ++  G   + I+ T L+S + K      A        +RD++ ++A+++  AR      A
Sbjct: 102 ILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREA 161

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           L LF ++   G+ P+  T  S + AC   G L+   ++H      G  S V + +  +  
Sbjct: 162 LGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNL 221

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K G I +A   F   ++ + VA++A+   Y  N     +  V   M   GL  N  + 
Sbjct: 222 YGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTF 281

Query: 183 TAVLGASFDV---KEGEQIHGFGVKVGFLSGVCN---HLNNAIMNLYVRCGQKLDAVKMF 236
            +VL A   +   K+G +IH    ++  L G      ++  A++N+Y +CG    A  MF
Sbjct: 282 VSVLDACAAIAALKQGRRIHE---RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMF 338

Query: 237 DEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D+I   D+V W+  IA         +A  LF+ +R    Q    T  ++L +     +L 
Sbjct: 339 DKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLD 398

Query: 294 AG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAG 351
            G K   +F    G          ++ + G+ G + D+  +  ++ F+   V+W + +  
Sbjct: 399 QGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGA 458

Query: 352 ----YSENGFFNQALDMFC----HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
                + +G    A ++F         + L+ N Y  A     V+    ++QAMQ+   +
Sbjct: 459 CRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVAR---MRQAMQLFMTV 515

Query: 404 IKSG 407
            ++G
Sbjct: 516 KEAG 519


>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
 gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 203/658 (30%), Positives = 345/658 (52%), Gaps = 23/658 (3%)

Query: 84  FSSLVKAC---GSLQENEIVHGVCLK--LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           F SL++ C    +L   +++H   LK  L  SS   LV+     YA   E+  A   F +
Sbjct: 2   FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60

Query: 139 CLD--LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK--- 193
                ++ +A+  M+  Y  N   +K+ +++ +M + G+   +++   VL A   ++   
Sbjct: 61  IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           +G+ IH       F + +  ++  A+++ Y +CG+   A+K+FDE+ + D+V+W+  I+ 
Sbjct: 121 DGKLIHSHVNCSDFATDM--YVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISG 178

Query: 254 ---ACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
               C   +  GLF D+R  D    N  T++ +  ++G    LR GK +  +C ++GF  
Sbjct: 179 FSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + +   ++ +Y K   +  AR +FD    K+ V+W++MI GY EN    +A ++F  ML
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298

Query: 370 --EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
             +   +     +  IL   +    L     VH + +K+GF+LD ++ + +I+ Y K  +
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L ++ R  SEI  K+ +  N+L +  V      E+  L+  +  S    + +T   VL A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           C+ +  L  G + H   +   Y  +  + +A++DMY KCG ++ AKR F  + +  +  W
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS- 606
           N M+ G+  HG   E  +LFN M + GV PDE+T LA+L++C H+GLV E +   + MS 
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538

Query: 607 -DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
            D + +IP+++HY C+ DLL R G L+ A   +++MP  PD  +  +LLSAC  Y N +L
Sbjct: 539 GDFN-VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           G     K+  L    ES  VLLSN Y++A  W D  ++R   K++ L K PGYSW+ V
Sbjct: 598 GNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 211/410 (51%), Gaps = 20/410 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF-DRL 72
           D  + T L+  + K  +   A +   +   RD++ +NA+ISG +  C     + LF D  
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196

Query: 73  RYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
           R  GL P+  T   +  A    G+L+E + VHG C ++GFS+ + + +G ++ YAKS  I
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV---- 185
           + A   F      + V ++AM+ GYV N    ++ EVF +M    +  N   +T V    
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML---VNDNVAMVTPVAIGL 313

Query: 186 --LG-ASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
             +G A F D+  G  +H + VK GF+  +   + N I++ Y + G   DA + F EI  
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLT--VQNTIISFYAKYGSLCDAFRQFSEIGL 371

Query: 242 PDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV+S++  I      C   E+F LF ++R +  + +  T++ +L++      L  G   
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             +C   G+    SI NAL+ MY KCG+++ A+ +FD +  +D VSWN+M+ G+  +G  
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
            +AL +F  M E  + P+  T+ +IL A S+S  + +  Q+ + + +  F
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF 541



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 228/467 (48%), Gaps = 16/467 (3%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGV 103
           I ++ +I   A    +  AL L+ ++   G+RP  +T+  ++KAC  L+   + +++H  
Sbjct: 69  IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                F++ +Y+ +  ++ YAK GE+  A   F +    D VA+ AM+ G+  +      
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188

Query: 164 KEVFVEMRSL-GLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI 219
             +F++MR + GL  N  ++  +   LG +  ++EG+ +HG+  ++GF + +   +   I
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV--VKTGI 246

Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINE 276
           +++Y +    + A ++FD   + + V+WS  I    +     EA  +F  +  ND  +  
Sbjct: 247 LDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND-NVAM 305

Query: 277 YTMINL-LSSVGGERI--LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            T + + L  +G  R   L  G+ +  +  K GF+  +++ N +IS Y K G + DA   
Sbjct: 306 VTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQ 365

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F  +  KD +S+NS+I G   N    ++  +F  M    + P+  T+  +L A S+  +L
Sbjct: 366 FSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAAL 425

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
                 H + +  G+ ++ S+ + L+  Y KC  L+ +KRV   + K++ V  N +    
Sbjct: 426 GHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGF 485

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
                  EAL L+ ++  +    +  T   +L AC+    +++GK +
Sbjct: 486 GIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQL 532



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 11/247 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K G  LD  +  T+IS + K+     AFR   +   +D+I+YN+LI+G    C+   + 
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +LF  +R  G+RPD  T   ++ AC    +L      HG C+  G++    + +  ++ Y
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K G++  A+  F      D V++  M+ G+  +G   ++  +F  M+  G+  +E +L 
Sbjct: 455 TKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLL 514

Query: 184 AVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDE 238
           A+L A   S  V EG+Q+     +  F   V   ++  N + +L  R G   +A    ++
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDF--NVIPRIDHYNCMTDLLARAGYLDEAYDFVNK 572

Query: 239 IT-EPDV 244
           +  EPD+
Sbjct: 573 MPFEPDI 579


>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 200/669 (29%), Positives = 344/669 (51%), Gaps = 32/669 (4%)

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKA--------------CGSLQENEI--VHGVCLKL 107
           P L LF  L    ++P+  TFS L+KA              C   ++ E   +    +K 
Sbjct: 33  PPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKW 92

Query: 108 GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
           GF   +Y+ + F++ Y+K G + +A+  F D  + D V++ A++ GY   G    + ++F
Sbjct: 93  GFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLF 152

Query: 168 VEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           VEMR    +  + +L +++   G      +G+ IHG GVK G    + + + NA++++Y 
Sbjct: 153 VEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGL--DLDSQVKNALVSMYG 210

Query: 225 RCGQKLDAVKM-FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMI 280
           +C   LD VK+ F EITE  VVSW+  I A   +G+  EA  +FK +       N  TM+
Sbjct: 211 KCAD-LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMV 269

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++LS+            I  +  K+G +E VS+  +L+  Y KCG +  A  I+   + K
Sbjct: 270 SILSANANTGC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKK 323

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + V+  ++I+ Y+E G     + ++  +    +  +   M  I++  +    +   +  H
Sbjct: 324 NLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFH 383

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            + +KSG ++D  + +  I+ Y K + ++    +  E+ KK     N++ S    A    
Sbjct: 384 GYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSI 443

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +A+ L+  +  S    +  T + +L AC    +L  G+ +HC  L+   D + FV +A++
Sbjct: 444 DAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALV 503

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG ++ A+  F+ +    LA WN+++ GY   G ++     + +M + G+KP++I
Sbjct: 504 DMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKI 563

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+  +L +C H GLV E R Y   M    G++P+ +H A +V +LGR GL E A + I  
Sbjct: 564 TFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQN 623

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           M   PD+ +W +LLSAC I+  + LG     KL      N   +VL+SNLYA++  WNDV
Sbjct: 624 METNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCRNGGFFVLMSNLYAASRRWNDV 683

Query: 701 GKLRKEMKE 709
            ++RK M+E
Sbjct: 684 ARIRKMMRE 692



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 228/504 (45%), Gaps = 11/504 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ +  IK G      +ST  +  ++K    + A R   D   +D++++NALISG  R  
Sbjct: 84  QLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCG 143

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
            S  A KLF  +R +   P   T  SL+ +CG+ Q   + + +HG+ +K G      + +
Sbjct: 144 NSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKN 203

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K  ++   ++ F +  +   V++  M+  +  NG F ++  VF +M    +  
Sbjct: 204 ALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNA 263

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           N  ++ ++L A+ +      IH +  K+G +  V   +  +++  YV+CG    A  ++ 
Sbjct: 264 NSVTMVSILSANANTG---CIHCYATKIGLVENV--SVVTSLVCSYVKCGYIELAELIYM 318

Query: 238 EITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
              + ++V+ +  I   A   D      L+  ++  D +++   M+ ++        +  
Sbjct: 319 SKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGI 378

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G     +  K G +    + N  ISMY K   ++   S+F  +  K   SWNS+I+  ++
Sbjct: 379 GLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQ 438

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            G    A+ +F  M      P+  T+AS+L A   + +L     +H +I+++   L+  +
Sbjct: 439 AGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFV 498

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y KC  ++ ++ V   + +      N+L S       H  AL  Y  +     
Sbjct: 499 GTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGI 558

Query: 475 EVNGSTFSIVLKACAAMTDLEQGK 498
           + N  TFS +L AC     +E+G+
Sbjct: 559 KPNKITFSGILAACTHGGLVEEGR 582



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 16/254 (6%)

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM-----------TDLEQGKA--I 500
           V   C    L L+R +     + N STFS+++KA               ++ E+ +A  +
Sbjct: 26  VEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQL 85

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
               +K  +DQ ++V +A +D+Y K G ++ A+R F       +  WNA++ GY + G  
Sbjct: 86  QTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNS 145

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
           H+   LF +M +    P + T ++++ SC    L  + ++ +  +    GL    +    
Sbjct: 146 HDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKS-IHGLGVKAGLDLDSQVKNA 204

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
           +V + G+   L+G K+   ++        W +++ A    G     +L   ++LE +  N
Sbjct: 205 LVSMYGKCADLDGVKLLFGEIT-EKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLE-ESVN 262

Query: 681 ESTYVLLSNLYASA 694
            ++  ++S L A+A
Sbjct: 263 ANSVTMVSILSANA 276


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 204/733 (27%), Positives = 367/733 (50%), Gaps = 24/733 (3%)

Query: 4   SLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSG 63
           +L+I  G   +  +++ LIS +  +     + R       RDI  +N++I          
Sbjct: 48  ALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYA 107

Query: 64  PALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLG-FSSRVYLVSGF 119
            +L  F  +   G  PD FT   +V AC  L        VHG+ LK G F     + + F
Sbjct: 108 RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASF 167

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           +  Y+K G +  A + F +  D D VA+TA++ G+V NGE +       +M S G ++++
Sbjct: 168 VYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDK 227

Query: 180 ---------FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
                    F   + LGA   +KEG  +HGF VK G  S     + +++ + Y + G   
Sbjct: 228 PNPRTLECGFQACSNLGA---LKEGRCLHGFAVKNGLASS--KFVQSSMFSFYSKSGNPS 282

Query: 231 DAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           +A   F E+ + D+ SW+  IA+   + D  E+F +F +++      +   +  L++ +G
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELG 342

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
              ++  GK    F  +  F    ++ N+L+SMY K   ++ A  +F  +  + +  +WN
Sbjct: 343 KMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +M+ GY +     + +++F  +    +  +  +  S++ + S+  ++     +H +++K+
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT 462

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
              L  S+++ LI  YGK   L  + R+  E D  N +  NA+ +  V+     +A+ L+
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALF 521

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             +     + +  T   +L AC     LE+G+ IH    +  ++ ++ + +A+IDMY KC
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKC 581

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G +E ++  F    +     WN M+ GY  HG       LF++M +  VKP   T+LA+L
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C HAGLV + +     M   + + P L+HY+C+VDLL R G LE A+ T+  MP  PD
Sbjct: 642 SACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPD 700

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             IW +LLS+C  +G  ++G+    + +   P N+  Y++L+N+Y++AG W +  + R+ 
Sbjct: 701 GVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760

Query: 707 MKEKFLCKEPGYS 719
           M+E  + K  G+S
Sbjct: 761 MRESGVGKRAGHS 773



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 132/563 (23%), Positives = 255/563 (45%), Gaps = 59/563 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +KNG      + +++ S ++K  +   A+    +  + D+ ++ ++I+ LAR   
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              +  +F  ++ +G+ PD    S L+   G +    + +  HG  ++  FS    + + 
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNS 371

Query: 119 FIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            +  Y K   +  AE  F R   + +  A+  M+ GY       K  E+F ++++LG+E+
Sbjct: 372 LLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEI 431

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  S T+V+ +   +     G+ +H + VK      +   + N++++LY + G    A +
Sbjct: 432 DSASATSVISSCSHIGAVLLGKSLHCYVVKTSL--DLTISVVNSLIDLYGKMGDLTVAWR 489

Query: 235 MFDEITEPDVVSWSERIAA--ACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           MF E  + +V++W+  IA+   C+  E A  LF  +   +F+ +  T++ LL +      
Sbjct: 490 MFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ I  +  +      +S+  ALI MY KCG +  +R +FD    KD+V WN MI+G
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISG 608

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA----MQVHSHIIKSG 407
           Y  +G    A+ +F  M E  + P G T  ++L A +++  ++Q     +++H + +K  
Sbjct: 609 YGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668

Query: 408 FLLDDSMISCLITTYGKCNALNESKR-VLSEIDKKNAVHINALASVLVYASCHAEALELY 466
                   SCL+    +   L E++  V+S     + V                      
Sbjct: 669 L----KHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGV---------------------- 702

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
             IWG+           +L +C    + E G  +   A+ +    D +    + +MY   
Sbjct: 703 --IWGT-----------LLSSCMTHGEFEMGIRMAERAVASDPQNDGYY-IMLANMYSAA 748

Query: 527 GTIEDAKRAFRKICRDSLAGWNA 549
           G  E+A+RA R++ R+S  G  A
Sbjct: 749 GKWEEAERA-REMMRESGVGKRA 770



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 21/195 (10%)

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S++L  C     LE  +  + L +     ++IFV S +I  Y   G    + R F  + R
Sbjct: 30  SVIL--CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR 87

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             +  WN+++  +  +G Y      F  M   G  PD  T   V+++C           +
Sbjct: 88  RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAEL-------LW 140

Query: 602 LSCMSDLHGLIPQLEH---------YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
               + +HGL+  L+H          A  V    + G L+ A +  D+MP   D   W +
Sbjct: 141 FHVGTFVHGLV--LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTA 197

Query: 653 LLSACTIYGNIDLGL 667
           ++S     G  + GL
Sbjct: 198 IISGHVQNGESEGGL 212


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 208/658 (31%), Positives = 334/658 (50%), Gaps = 75/658 (11%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y + G+  SA   F        V Y AM+ GY+ N +FD +++VF +M    L    
Sbjct: 67  ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDL---- 122

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
                    S++V               LSG            YV+ G    A  +F+++
Sbjct: 123 --------ISWNV--------------MLSG------------YVKNGNLSAARALFNQM 148

Query: 240 TEPDVVSWSERIAAACDGVEAFGLFKDLR--FNDFQI-NEYTMINLLSS-VGGERILRAG 295
            E DVVSW+    A   G    G  ++ R  F+   + NE +   LLS+ V   RI  A 
Sbjct: 149 PEKDVVSWN----AMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDAR 204

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +    F  K+ + E+VS  N L+  Y +  +++DARS+FD +  +D +SWN MI GY++N
Sbjct: 205 R---LFDSKMDW-EIVSW-NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259

Query: 356 GFFNQALDMFCHM-----LEFSLIPNGYTMASIL-EAVSNSKSLKQAMQVHSHIIKSGFL 409
           G  ++A  +F  +       ++ + +G+    +L EA    + + +  +V  + + +G++
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYV 319

Query: 410 ----------LDDSMIS-------CLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
                     L D M S        ++T Y +C  ++++K +  E+ +++ +   A+ S 
Sbjct: 320 QSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISG 379

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
              +    EAL L+  +      +N S  +  L +CA +  LE GK +H   +KA +   
Sbjct: 380 YAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG 439

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
               +A++ MY KCG+IE+A   F  I    +  WN M+ GYA+HG   E   LF  M K
Sbjct: 440 YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-K 498

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             +KPD++T + VL++C H GLV +   Y + M   +G+    +HY C++DLLGR G L+
Sbjct: 499 MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD 558

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   +  MP  PDA  W +LL A  I+G+ +LG  A  K+ E++PDN   YVLLSNLYA
Sbjct: 559 EALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYA 618

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           ++G W +V ++R +M++K + K PGYSW+ +   TH F  GD SH +++ IY  L +L
Sbjct: 619 ASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEEL 676



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 209/452 (46%), Gaps = 46/452 (10%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D I    ++S + K  +   A         +D++++NA++SG A+      A K+FD++ 
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179

Query: 74  YQGLRPDAFTFSSLVKA---CGSLQEN----------EIVHGVCLKLGFSSRVYLVSG-- 118
              L  +  +++ L+ A    G +++           EIV   CL  G+  +  L     
Sbjct: 180 ---LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236

Query: 119 ---------------FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                           I  YA++G +  A   F +    D  A+TAMV G+V NG  D++
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             +F EM     E NE S  A++       + +QI         +        N ++  Y
Sbjct: 297 TRIFEEMP----EKNEVSWNAMIAGYV---QSQQIEKARELFDQMPSRNTSSWNTMVTGY 349

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMI 280
            +CG    A  +FDE+ + D +SW+  I   A +    EA  LF  ++ +   +N   + 
Sbjct: 350 AQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALA 409

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
             LSS      L  GKQ+     K GF      GNAL++MYGKCG + +A  +F+ +  K
Sbjct: 410 CALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK 469

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D VSWN+MIAGY+ +GF  +AL +F  M + ++ P+  T+  +L A S++  + + M+  
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYF 528

Query: 401 SHIIKS-GFLLDDSMISCLITTYGKCNALNES 431
           + + ++ G   +    +C+I   G+   L+E+
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 138/620 (22%), Positives = 262/620 (42%), Gaps = 85/620 (13%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           IS + +      A       + R  +TYNA+ISG     +   A K+F+++      PD 
Sbjct: 67  ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------PDR 120

Query: 82  FTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
              S  V                          ++SG+++N    G + +A   F    +
Sbjct: 121 DLISWNV--------------------------MLSGYVKN----GNLSAARALFNQMPE 150

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQI 198
            D V++ AM+ G+  NG  ++++++F +M    L  NE S   +L A      +++  ++
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRL 206

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG 257
               +    +S  C      +M  YVR  +  DA  +FD +   D +SW+  I   A +G
Sbjct: 207 FDSKMDWEIVSWNC------LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260

Query: 258 V--EAFGLFKDLRFNDF-----QINEYTMINLLSSVGGERILRAGKQIQAFCYK---VGF 307
           +  EA  LF++L   D       ++ +    +L      RI     +     +     G+
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDE--ATRIFEEMPEKNEVSWNAMIAGY 318

Query: 308 MEVVSI-----------------GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           ++   I                  N +++ Y +CG ++ A+ +FD +  +D +SW +MI+
Sbjct: 319 VQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMIS 378

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+++G   +AL +F  M     I N   +A  L + +   +L+   Q+H  ++K+GF  
Sbjct: 379 GYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQT 438

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
                + L+  YGKC ++ E+  V  +I +K+ V  N + +         EAL L+ ++ 
Sbjct: 439 GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK 498

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
            + +  +  T   VL AC+    +++G +  + +        +    + +ID+  + G +
Sbjct: 499 MTIKP-DDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRL 557

Query: 530 EDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++A    + +      A W A++     HG          K+  F ++PD      +L++
Sbjct: 558 DEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV--FEMEPDNSGMYVLLSN 615

Query: 589 CCHA-GLVREARTYLSCMSD 607
              A G  RE R   S M D
Sbjct: 616 LYAASGRWREVREMRSKMRD 635



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 164/347 (47%), Gaps = 18/347 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D I    +I+ + +      A R   +   RD+  + A++SG  +      A ++F+ + 
Sbjct: 245 DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM- 303

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-VYLVSGFIENYAKSGEIVSA 132
                P+    S      G +Q  +I     L     SR     +  +  YA+ G I  A
Sbjct: 304 -----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQA 358

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
           ++ F +    D +++ AM+ GY  +G+ +++  +F++M+  G  LN  +L   L +  ++
Sbjct: 359 KILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEI 418

Query: 193 KE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
                G+Q+HG  VK GF +G      NA++ +Y +CG   +A  +F++ITE D+VSW+ 
Sbjct: 419 AALELGKQLHGRLVKAGFQTGYI--AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNT 476

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-V 305
            IA       G EA  LF+ ++    + ++ T++ +LS+     ++  G +     Y+  
Sbjct: 477 MIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNY 535

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAG 351
           G          +I + G+ G++++A ++   + F  D+ +W +++  
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/354 (20%), Positives = 155/354 (43%), Gaps = 28/354 (7%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  IS Y + GQ   A S+F+ +  + +V++N+MI+GY  N  F+ A  +F  M +  LI
Sbjct: 64  NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
               +   +L     + +L  A  + + + +   +  ++M+S     + +   + E++++
Sbjct: 124 ----SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLS----GFAQNGFVEEARKI 175

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             ++  KN +  N L S  V      +A  L+ +            + IV   C     +
Sbjct: 176 FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS---------KMDWEIVSWNCLMGGYV 226

Query: 495 EQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            + +     +L  R   +D    + +I  Y + G + +A+R F ++    +  W AM+ G
Sbjct: 227 RKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSG 286

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           + Q+G   E + +F +M     + +E+++ A++     +  + +AR     M   +    
Sbjct: 287 FVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN---- 338

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
               +  +V    + G ++ AK+  D+MP   D   W +++S     G  +  L
Sbjct: 339 -TSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEAL 390



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  L+K G     I    L++ + K      AF    D   +DI+++N +I+G AR  
Sbjct: 426 QLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHG 485

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL LF+ ++   ++PD  T   ++ AC
Sbjct: 486 FGKEALALFESMKMT-IKPDDVTLVGVLSAC 515



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 14/157 (8%)

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D DI   +  I  Y + G  E A   F  + R S   +NAM+ GY  +  +     +F K
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 570 MSKFGVKPDE--ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           M      PD   I++  +L+     G +  AR   + M +       +  +  ++    +
Sbjct: 117 M------PDRDLISWNVMLSGYVKNGNLSAARALFNQMPE-----KDVVSWNAMLSGFAQ 165

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
            G +E A+   DQM +  +   W  LLSA    G I+
Sbjct: 166 NGFVEEARKIFDQMLVKNEIS-WNGLLSAYVQNGRIE 201


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 193/632 (30%), Positives = 324/632 (51%), Gaps = 50/632 (7%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGF 201
           +A+ +++  Y  +G   KS   F+ M + GL  +     +VL A     D+  GE +HG+
Sbjct: 74  LAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGY 133

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCG-------QKLDAVKMFDEITEPDVVSWSERIAAA 254
            ++VG    +  +  NA+MN+Y +         Q+L A ++ DE+TE    + S R A+ 
Sbjct: 134 IIRVGLDFDL--YTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTER---TRSVRTASV 188

Query: 255 CDG--------VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
             G        +EAF      R  +F+                       Q+    YK  
Sbjct: 189 LVGNQGRKVSDIEAFNYDVSCRSREFE----------------------AQVLEIDYKPR 226

Query: 307 F----MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
                ME  ++G  +  +      V+  R IF+ +  KD VSWN++IAG + NG + + L
Sbjct: 227 SEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETL 285

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            M   M   +L P+ +T++S+L  ++ +  + +  ++H   I+ G   +  + S LI  Y
Sbjct: 286 TMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMY 345

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  + +S RV + + +++ +  N++ +  V      E L+ +R +  +  +    +FS
Sbjct: 346 AKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFS 405

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            ++ ACA +T L  GK +H    +  +D++IF+ S+++DMY KCG I  A++ F ++   
Sbjct: 406 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR 465

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +  W AM+MG A HG   +   LF +M   G++P+ + ++AVLT+C HAGLV EA  Y 
Sbjct: 466 DMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYF 525

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           + M+   G+ P +EHYA + DLLGR G LE A   I  MPI P   +W +LLSAC ++ N
Sbjct: 526 NSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKN 585

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           +D+     +++LE+ P N   Y+LL+N+Y++A  W +  K R  ++   + K P  SWI 
Sbjct: 586 VDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIE 645

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           V    + F AGD SH   ++I + +  L E M
Sbjct: 646 VRNKVYAFMAGDESHPCYEKIREAMEVLMELM 677



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 159/326 (48%), Gaps = 18/326 (5%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           ISH       R+ F  +     +D++++N +I+G AR    G  L +   +    L+PD+
Sbjct: 244 ISHSMSVDSVRKIFEMM---PEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300

Query: 82  FTFSS---LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           FT SS   L+     + + + +HG  ++ G  + VY+ S  I+ YAK   +V +   F  
Sbjct: 301 FTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL 360

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---G 195
             + D +++ +++ G V NG FD+  + F +M    ++   +S ++++ A   +     G
Sbjct: 361 LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 420

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---A 252
           +Q+HG+  + GF   +   + ++++++Y +CG    A ++FD +   D+VSW+  I   A
Sbjct: 421 KQLHGYITRNGFDENI--FIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCA 478

Query: 253 AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL-RAGKQIQAFCYKVGFMEVV 311
                ++A  LF+ ++    + N    + +L++     ++  A K   +     G    V
Sbjct: 479 LHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGV 538

Query: 312 SIGNALISMYGKCGQVNDARSIFDYL 337
               A+  + G+ G++ +A   +D++
Sbjct: 539 EHYAAVSDLLGRAGRLEEA---YDFI 561



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+   I+ G   +  ++++LI  + K      ++R       RD I++N++I+G  +  
Sbjct: 321 EIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNG 380

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                LK F ++    ++P +++FSS++ AC    +L   + +HG   + GF   +++ S
Sbjct: 381 LFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIAS 440

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK G I +A   F      D V++TAM+ G   +G    + E+F +M++ G+E 
Sbjct: 441 SLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEP 500

Query: 178 NEFSLTAVLGA 188
           N  +  AVL A
Sbjct: 501 NYVAFMAVLTA 511



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 147/361 (40%), Gaps = 38/361 (10%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           +Y     ++D+  +F+ L F  +++W S+I  Y+ +G  +++L  F  ML   L P+   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR------ 433
             S+L+A +    L     +H +II+ G   D    + L+  Y K   L +S R      
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 434 -VLSEI-DKKNAVHINALASVLV-YASCHAEALELYR-TIWGSCREVNGSTFSIVLKACA 489
            VL E+ ++  +V     ASVLV         +E +   +    RE       I  K  +
Sbjct: 171 QVLDEMTERTRSVRT---ASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRS 227

Query: 490 AMTDLEQ---GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
              ++E    G+ I          +DI              +++  ++ F  +    L  
Sbjct: 228 EYREMEACNLGQQI----------KDI----------SHSMSVDSVRKIFEMMPEKDLVS 267

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN ++ G A++G Y E   +  +M    +KPD  T  +VL        + + +    C S
Sbjct: 268 WNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGC-S 326

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
              GL  ++   + ++D+  +   +  +   +  +    D   W S+++ C   G  D G
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDS-YRVFTLLTERDGISWNSIIAGCVQNGLFDEG 385

Query: 667 L 667
           L
Sbjct: 386 L 386



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++  + +NG   +  ++++L+  + K  + R A R +FD    RD++++ A+I G A  
Sbjct: 422 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTA-RQIFDRMRLRDMVSWTAMIMGCALH 480

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
             +  A++LF++++ +G+ P+   F +++ AC
Sbjct: 481 GHALDAIELFEQMKTEGIEPNYVAFMAVLTAC 512



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 7/156 (4%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           S+L    + KS  QA Q+H+ ++K         +S L++ Y   N L++S R+ + +   
Sbjct: 13  SLLRNPLSIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFP 71

Query: 442 NAVHINALASVLVYASCHA---EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            A+   A  SV+   + H    ++L  +  +  S    + + F  VLKACA + DL  G+
Sbjct: 72  PAL---AWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGE 128

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           ++H   ++   D D++  +A+++MY K   ++ + R
Sbjct: 129 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGR 164


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 224/813 (27%), Positives = 376/813 (46%), Gaps = 125/813 (15%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
           A + L +  NR +  Y ALI    R  Q       F  + Y+G+ PD +   +++KAC +
Sbjct: 136 ARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSA 195

Query: 94  L---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
           +   +  ++VHG  ++    S V++ +  I  Y+  G++ S+   F    + D V++TA+
Sbjct: 196 MLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTAL 255

Query: 151 VCGYV--------------------------W---------NGEFDKSKEVFVEMRSLGL 175
           +  Y+                          W         NGE D + E   EM   GL
Sbjct: 256 ISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGL 315

Query: 176 E----------------------LNEFS-------------LTAVLGASFDVKE---GEQ 197
           +                      L+ FS             + ++L A   +K    G+ 
Sbjct: 316 QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKA 375

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           IH    K G +  V  ++  +++++Y +CG    A K+F +    +   W+E IAA  + 
Sbjct: 376 IHXIAXKHGIVGNV--YVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNE 433

Query: 258 ---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
               +A GL + ++ + ++ +  T   +LS        R G + QA        E+V +G
Sbjct: 434 GKVEDALGLLRSMQKDGWKPDVITYNTILSGHA-----RNGLKTQAXEL---LSEMVQMG 485

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF--------- 365
                                  +  + VS+N +I+G+ ++G   +AL +F         
Sbjct: 486 -----------------------LKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDG 522

Query: 366 CH---MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           C+   +L  S+ PN  T+   L A ++     Q  ++H + +++GF  +  + S L+  Y
Sbjct: 523 CNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMY 582

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC+ ++ + +V   ID +N V  NAL +  +      EAL+L+  + G   + +  TF 
Sbjct: 583 AKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFM 642

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQ-DIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           I+  AC  +  +  G+ +H  A K + D+    + SA+IDMY KCG+I DAK  F     
Sbjct: 643 ILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVE 702

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             +  WNAM+  ++ HG       +F +M   G+ PD IT++++L++C   GLV E   Y
Sbjct: 703 KDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKY 762

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            + M   +G+   LEHY C+V +LG  GLL+ A   I QMP PPDA +W +LL AC ++ 
Sbjct: 763 FNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHS 822

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           N ++G  A   L EL+PDN + Y+LLSN+Y S+GMW+    LR  M+ + L      S++
Sbjct: 823 NPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYL 882

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            VG +   F  G+SSH + +EI +    L   M
Sbjct: 883 TVGSHXCTFKGGESSHPELEEILETWDXLARKM 915



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 202/461 (43%), Gaps = 39/461 (8%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSER 250
           + E  QIH   VK+  L    + + N ++ LY +    L DA K+ DEI    V +++  
Sbjct: 96  LSEFRQIHARVVKLNALKWKSS-IGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAAL 154

Query: 251 IAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           I + C      E F  F+ + +     ++Y +  +L +     + R GK +  F  +   
Sbjct: 155 IRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSV 214

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
              V +GNALI  Y  CG +  +RS+F  +  +D VSW ++I+ Y E G  ++A  +F H
Sbjct: 215 ESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIF-H 273

Query: 368 MLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           +++   + P+  + +++L   + +  +  A++    + + G                   
Sbjct: 274 LMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGL------------------ 315

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
                        +      N + S  V      +AL+++  +     + N  T + +L 
Sbjct: 316 -------------QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILP 362

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           AC  +  L  GKAIH +A K     +++VE +VIDMY KCG+ + A++ F K    + A 
Sbjct: 363 ACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAM 422

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN M+  Y   G   +   L   M K G KPD ITY  +L+     GL  +A   LS M 
Sbjct: 423 WNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMV 482

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
            + GL P +  +  ++    + GL   A      M  P D 
Sbjct: 483 QM-GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDG 522



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/508 (22%), Positives = 221/508 (43%), Gaps = 29/508 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGL 56
            I+ L+  +G   D I  + L+S F +  +   A   L +   R     + ++N +ISG 
Sbjct: 270 HIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGC 329

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRV 113
            +      AL +F R+ +    P+  T +S++ AC  L+     + +H +  K G    V
Sbjct: 330 VQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNV 389

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           Y+    I+ Y+K G    AE  F    + +   +  M+  YV  G+ + +  +   M+  
Sbjct: 390 YVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKD 449

Query: 174 GLELNEFSLTAVLG--ASFDVK-EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           G + +  +   +L   A   +K +  ++    V++G    V +   N +++ + + G   
Sbjct: 450 GWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSF--NVLISGFQQSGLSY 507

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           +A+K+F  +  P         +  C+  E   L         + N  T+   L +     
Sbjct: 508 EALKVFRIMQSP---------SDGCNPNEVLNL-------SMRPNPITITGALPACADLN 551

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           +   GK+I  +  + GF   + + +AL+ MY KC  ++ A  +F  +  +++VSWN+++A
Sbjct: 552 LWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMA 611

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF-L 409
           GY  N    +AL +F  ML   L P+  T   +  A  +  +++    +H +  K     
Sbjct: 612 GYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDE 671

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           L +++ S LI  Y KC ++ ++K V     +K+    NA+ S          A  ++  +
Sbjct: 672 LKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQM 731

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQG 497
                  +  TF  +L ACA    +E+G
Sbjct: 732 ELLGIXPDHITFVSLLSACARDGLVEEG 759



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 6/280 (2%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCN-ALNESKRVLSEIDKKNAVHINAL 449
           +L +  Q+H+ ++K   L   S I + L+  Y K   +L +++++L EI  +      AL
Sbjct: 95  TLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAAL 154

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
                 +    E    +R +       +      +LKAC+AM     GK +H   ++   
Sbjct: 155 IRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSV 214

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           + D+FV +A+I  Y  CG +  ++  F  +    +  W A++  Y + G   E  ++F+ 
Sbjct: 215 ESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHL 274

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M   GVKPD I++ A+L+     G +  A   L  M +  GL P +  +  I+    + G
Sbjct: 275 MQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPE-RGLQPTVNSWNGIISGCVQNG 333

Query: 630 LLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLG 666
            LE A     +M   P  P+     S+L ACT    + LG
Sbjct: 334 YLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLG 373



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/433 (17%), Positives = 165/433 (38%), Gaps = 81/433 (18%)

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNS------------------------------ 347
           IS+  +C  +++ R I   ++  +++ W S                              
Sbjct: 87  ISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNR 146

Query: 348 -------MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
                  +I  Y  +  +++    F  M+   ++P+ Y + +IL+A S     +    VH
Sbjct: 147 TVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVH 206

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             +I+     D  + + LI  Y  C  L  S+ V   + +++ V   AL S  +      
Sbjct: 207 GFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXD 266

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EA  ++                                  H + L      D+   SA++
Sbjct: 267 EAKHIF----------------------------------HLMQLDG-VKPDLISWSALL 291

Query: 521 DMYCKCGTIEDAKRAFRKI----CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
             + + G I+ A     ++     + ++  WN ++ G  Q+G   +  ++F++M  +   
Sbjct: 292 SGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPED 351

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+ IT  ++L +C     +R  +  +  ++  HG++  +     ++D+  + G  + A+ 
Sbjct: 352 PNIITIASILPACTGLKALRLGKA-IHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEK 410

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              +      A +W  +++A    G ++  LGLL   +    +PD  +   +LS  +A  
Sbjct: 411 VFXKAENKNTA-MWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSG-HARN 468

Query: 695 GMWNDVGKLRKEM 707
           G+     +L  EM
Sbjct: 469 GLKTQAXELLSEM 481


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 190/549 (34%), Positives = 287/549 (52%), Gaps = 5/549 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLRFND 271
           L N ++N+Y +      A  +       +VVSW+  I+  A +G  +  L  F ++R   
Sbjct: 44  LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG 103

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
              N++T      +V   R+   GKQI A   K G +  V +G +   MY K    +DAR
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD +  ++  +WN+ I+    +G   +A++ F         PN  T  + L A S+  
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L   MQ+H  +++SGF  D S+ + LI  YGKC  +  S+ + +E+  KNAV   +L +
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
             V      +A  LY        E +    S VL ACA M  LE G++IH  A+KA  ++
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            IFV SA++DMY KCG IED+++AF ++   +L   N+++ GYA  G       LF +M+
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403

Query: 572 KF--GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
               G  P+ +T++++L++C  AG V         M   +G+ P  EHY+CIVD+LGR G
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
           ++E A   I +MPI P   +W +L +AC ++G   LGLLA   L +L P +   +VLLSN
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
            +A+AG W +   +R+E+K   + K  GYSWI V    H F A D SH  +KEI   L K
Sbjct: 524 TFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAK 583

Query: 750 LYEHMVATA 758
           L   M A  
Sbjct: 584 LRNEMEAAG 592



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 208/444 (46%), Gaps = 14/444 (3%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           P L+  LI+ ++K      A   L  T  R+++++ +LISGLA+      AL  F  +R 
Sbjct: 42  PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR 101

Query: 75  QGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           +G+ P+ FTF    KA  SL+     + +H + +K G    V++     + Y K+     
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F +  + +   + A +   V +G   ++ E F+E R +    N  +  A L A  D
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 192 ---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
              +  G Q+HG  ++ GF + V   + N +++ Y +C Q   +  +F E+   + VSW 
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVS--VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279

Query: 249 ERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             +AA     E   A  L+   R +  + +++ + ++LS+  G   L  G+ I A   K 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                + +G+AL+ MYGKCG + D+   FD +  K+ V+ NS+I GY+  G  + AL +F
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399

Query: 366 CHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTY 422
             M        PN  T  S+L A S + +++  M++   +  + G        SC++   
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459

Query: 423 GKCNALNESKRVLSEIDKKNAVHI 446
           G+   +  +   + ++  +  + +
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISV 483



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 17/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           QI++L +K G  LD  +  +    + K    R   R LFD    R++ T+NA IS     
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCK-TRLRDDARKLFDEIPERNLETWNAFISNSVTD 187

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
            +   A++ F   R     P++ TF + + AC     L     +HG+ L+ GF + V + 
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +G I+ Y K  +I S+E+ F +    + V++ ++V  YV N E +K+  +++  R   +E
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F +++VL A      ++ G  IH   VK      +   + +A++++Y +CG   D+ 
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI--FVGSALVDMYGKCGCIEDSE 365

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDL--RFNDFQINEYTMINLLSSVGG 288
           + FDE+ E ++V+ +  I       +   A  LF+++  R      N  T ++LLS+   
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425

Query: 289 ERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WN 346
              +  G +I  +     G        + ++ M G+ G V  A      +  + ++S W 
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485

Query: 347 SM 348
           ++
Sbjct: 486 AL 487



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKR 534
           ++     ++LK   + + +  G+ +H   +K        F+ + +I+MY K    E A+ 
Sbjct: 4   LSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
             R     ++  W +++ G AQ+G +      F +M + GV P++ T+
Sbjct: 64  VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 111


>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 177/523 (33%), Positives = 282/523 (53%), Gaps = 7/523 (1%)

Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F +I +P+V SW+    A   +    E   L+  +  N    + Y+   +L +     +
Sbjct: 83  LFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSL 142

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMI 349
           L  G++I +   K+G    V + NALIS +  CG V  AR++FD L  + +D VSWNSMI
Sbjct: 143 LHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMI 202

Query: 350 AGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +GY ++  +  AL +F  +L + SL P+  T+ S L        L    ++H     SGF
Sbjct: 203 SGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGF 262

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           +LD  + S LI  Y KC  + ++++V   I  +N V   ++ +    +    EA+EL+R 
Sbjct: 263 VLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFRE 322

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       + +T + VL AC     L QG+ IH    +   + D+   +A+I MY KCG 
Sbjct: 323 MQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGD 382

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLT 587
           I+ A   F  + +  +  W+A++ G A +G   +  +LF++M     ++P+EIT+L VL 
Sbjct: 383 IQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLC 442

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C H G V +   Y + M+ ++ L P +EHY C+VDLLGR  LL  A+  I  +PI PD 
Sbjct: 443 ACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDV 502

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW+SLL AC  +GNI+L   A  ++ EL+P      VLLSN+YASA  W DV ++RK+M
Sbjct: 503 VIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDM 562

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             + + K+PG S++ + G  H  +  D SH +   IY+ +I +
Sbjct: 563 ATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISI 605



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 222/464 (47%), Gaps = 23/464 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLI----SHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           QI S  I +G   DP++S+ L+    SH   FA  R  F   F     ++ ++N +    
Sbjct: 46  QILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLF---FQIHKPNVFSWNFMFRAY 102

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRV 113
           +R       + L++ +   G  PD ++F  ++KAC     L +   +H   LKLG    V
Sbjct: 103 SRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDV 162

Query: 114 YLVSGFIENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
           ++ +  I  ++  G + +A   F     L  D V++ +M+ GY+ +  ++ + +VF E+ 
Sbjct: 163 FVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELL 222

Query: 172 SLG-LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
             G L  +E +L + L   G    +  G++IHG     GF+  V   + ++++++Y +CG
Sbjct: 223 GDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDV--FVGSSLIDMYSKCG 280

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLS 284
           Q  DA K+FD I   + V W+  IA         EA  LF++++   F  +  T+  +LS
Sbjct: 281 QIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLS 340

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           + G    L  G+ I  +C +      ++  NALI MY KCG +  A  IF  L   D  S
Sbjct: 341 ACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFS 400

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           W+++I+G + NG  ++AL +F  M   S I PN  T   +L A ++   + + +   + +
Sbjct: 401 WSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAM 460

Query: 404 IKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +   L        C++   G+ N L E+++ +  +  +  V I
Sbjct: 461 TQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVI 504



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 179/365 (49%), Gaps = 15/365 (4%)

Query: 330 ARSIFDYLIFKDSV-SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           +R++F + I K +V SWN M   YS + F  + + ++  ML    +P+ Y+   +L+A +
Sbjct: 80  SRTLF-FQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACA 138

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK--KNAVHI 446
               L +  ++HS  +K G  LD  + + LI+ +  C A+  ++ V   +    ++ V  
Sbjct: 139 RLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSW 198

Query: 447 NALASVLVYASCHAEALELYRTIWG----SCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
           N++ S  + +  +  AL+++  + G    S  EV   T    L  C  +  L+ GK IH 
Sbjct: 199 NSMISGYLQSHRYELALKVFWELLGDGSLSPDEV---TLVSALSVCGRLGLLDLGKKIHG 255

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
           L   + +  D+FV S++IDMY KCG IEDA++ F +I   +   W +M+ GYAQ   + E
Sbjct: 256 LFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 315

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV 622
              LF +M   G   D  T   VL++C H G + + R ++    + + +   L     ++
Sbjct: 316 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGR-WIHLYCERNSIEMDLNARNALI 374

Query: 623 DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDN 680
            +  + G ++ A + I      PD   W +++S   + G  D  L L +  +++     N
Sbjct: 375 GMYSKCGDIQKA-LEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPN 433

Query: 681 ESTYV 685
           E T++
Sbjct: 434 EITFL 438



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 10/266 (3%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT-TYGKCNALNESKRVLSEIDK 440
           S+L+ +S+ +S  Q +   SH I SG   D  + S L+  +    +    S+ +  +I K
Sbjct: 33  SLLQNLSHPRSFNQIL---SHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHK 89

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
            N    N +      +S  AE + LY  +  +    +  +F  VLKACA ++ L +G+ I
Sbjct: 90  PNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREI 149

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF---RKICRDSLAGWNAMMMGYAQH 557
           H   LK     D+FV++A+I  +  CG +E A+  F     + RD +  WN+M+ GY Q 
Sbjct: 150 HSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRD-VVSWNSMISGYLQS 208

Query: 558 GCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
             Y     +F ++   G + PDE+T ++ L+ C   GL+   +      +   G +  + 
Sbjct: 209 HRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTG-SGFVLDVF 267

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMP 642
             + ++D+  + G +E A+   D++P
Sbjct: 268 VGSSLIDMYSKCGQIEDARKVFDRIP 293


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 196/712 (27%), Positives = 363/712 (50%), Gaps = 31/712 (4%)

Query: 1   QIYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI++L++++    HLD  +    I+ + K      A +     + RD++++  +I   ++
Sbjct: 234 QIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQ 293

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             +   +L+LF  +  +G  P++ TF S++  C +   L++   +H + ++    S V +
Sbjct: 294 DGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVV 353

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-- 173
            +  +  Y++      +   F      D+V+++ ++     + E    ++     RS+  
Sbjct: 354 ANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMAC--SREDSHCRDALPLYRSMLH 411

Query: 174 -GLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGF---LSGVCNHLNNAIMNLYVRC 226
            G+     +L+ VL   G+  ++K G+ +H   ++ G    L G+      +++N+Y +C
Sbjct: 412 EGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGI------SLVNMYAKC 465

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA--ACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
           G   +A K+FD I     + W+  I A    D  EA  LF++++      +  T + +L+
Sbjct: 466 GTVGEARKVFDRINNRSRILWNSMITAYQEKDPHEALHLFREMQPEGVSPDRITFMTVLN 525

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +      L  G+ I       GF   V +  AL +MY KCG + +AR +FD ++F+D VS
Sbjct: 526 ACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVS 585

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN+MIA Y +      A+ +   M    + P+  T  S+L A S+   L    Q+HS I 
Sbjct: 586 WNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIA 645

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL---ASVLVYASCHAE 461
           +S    D  M++ LIT Y  C +LN ++ +   I   +  H   L    S++     H E
Sbjct: 646 ESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGE 705

Query: 462 ---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
              ALELY  +     E +  TF  VL ACA ++DL QG+AIH   ++     D+ V ++
Sbjct: 706 YRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANS 765

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++ MY KCG+ ++A   F K     ++ W A++  YA+HG   +   +F ++ + G++  
Sbjct: 766 IVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELS 825

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
            +T++A+L++C H GL+ E   + + M++L G+ P +EH++C+VDLL R G L  A+  +
Sbjct: 826 NLTFVAMLSACSHVGLIEEGCEFFASMAEL-GIEPNMEHHSCLVDLLARAGHLHTAEEFL 884

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
            +MP+  +  +  +LL+AC ++G+++       KL  L P++E+ YV LSN+
Sbjct: 885 SRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 168/636 (26%), Positives = 308/636 (48%), Gaps = 19/636 (2%)

Query: 42  QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENE 98
           + RD++++  +I   ++  +   +L+LF  +  +G  P++ TF S++  C +   L++  
Sbjct: 72  KRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGR 131

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM-CFRDCLDLDNVAYTAMVCGYVWN 157
            +H + ++    S V + +  +  Y++      + M  F      D V++T M+  Y  +
Sbjct: 132 QIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQD 191

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNH 214
           G+F  S ++F EM   G   N  +  ++L    A   +++G QIH   V+    S +   
Sbjct: 192 GKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIG 251

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFG--LFKDLRFND 271
           + N  +N+YV+CG    AV+ F  +   DVVSW+  I A + DG  +    LF+++    
Sbjct: 252 VLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEG 311

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
              N  T +++LS      +L  G+QI A   +      V + N+L+ MY +C    D+R
Sbjct: 312 TAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSR 371

Query: 332 SIFDYLIFKDSVSWNSMIAGYS-ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           S+FD +  +DSVSW+++I   S E+     AL ++  ML   ++P    ++ +LEA  + 
Sbjct: 372 SLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSL 431

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
             LK    VH+H+I+SG   D   IS L+  Y KC  + E+++V   I+ ++ +  N++ 
Sbjct: 432 AELKGGKLVHAHVIESGLEGDLVGIS-LVNMYAKCGTVGEARKVFDRINNRSRILWNSMI 490

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +       H EAL L+R +       +  TF  VL AC    DLE G+ IH   + + + 
Sbjct: 491 TAYQEKDPH-EALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFA 549

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            D+ V +A+ +MY KCG++ +A+  F  +    +  WN M+  Y Q        +L   M
Sbjct: 550 ADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAM 609

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              G++PD+ T+ ++L +C     + + R   S +++   L   +     ++ +    G 
Sbjct: 610 QLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESR-LENDIVMVTGLITMYANCGS 668

Query: 631 LEGAKMTIDQMPIPPDAH-----IWQSLLSACTIYG 661
           L  A+   D +      H     +W S+++A   +G
Sbjct: 669 LNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHG 704



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/599 (27%), Positives = 290/599 (48%), Gaps = 27/599 (4%)

Query: 75  QGLRPDAFTFSSLVKAC---GSLQENEIVH----GVCLKLGFSSRVYLVSGFIENYAKSG 127
           +G+ PD     +L+ AC   G+L+E +++     G  L+L    R       I  Y K G
Sbjct: 4   RGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLT----INMYVKCG 59

Query: 128 EIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG 187
            +  A   F      D V++T M+  Y  +G+F  S ++F EM   G   N  +  ++L 
Sbjct: 60  CLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILS 119

Query: 188 ---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA-VKMFDEITEPD 243
              A   +++G QIH   V+    S V   + N+++ +Y RC    D+ ++ F  +   D
Sbjct: 120 GCEAPSLLEQGRQIHALVVESSLESHVV--VANSLLGMYSRCRSWEDSRMQTFARMKRRD 177

Query: 244 VVSWSERIAA-ACDGVEAFG--LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VVSW+  I A + DG  +    LF+++       N  T +++LS      +L  G+QI A
Sbjct: 178 VVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHA 237

Query: 301 FCYKVGFMEVVSIG--NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
              +      + IG  N  I+MY KCG ++ A   F  +  +D VSW  MI  YS++G F
Sbjct: 238 LVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKF 297

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
           + +L +F  ML     PN  T  SIL        L+Q  Q+H+ +++S       + + L
Sbjct: 298 SLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSL 357

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCREVN 477
           +  Y +C +  +S+ +   +  +++V  + +         H  +AL LYR++        
Sbjct: 358 LGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPK 417

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
               S+VL+AC ++ +L+ GK +H   +++  + D+ V  ++++MY KCGT+ +A++ F 
Sbjct: 418 TLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFD 476

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           +I   S   WN+M+  Y Q    HE  +LF +M   GV PD IT++ VL +C +A  +  
Sbjct: 477 RINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLEN 535

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
            RT  + + D  G    +     + ++  + G L  A+   D M +  D   W ++++A
Sbjct: 536 GRTIHTRIVD-SGFAADVRVATALFNMYAKCGSLGEARGVFDSM-VFRDVVSWNNMIAA 592



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 182/376 (48%), Gaps = 17/376 (4%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK IQ           + + N  I+MY KCG ++ A   F  +  +D VSW  MI  
Sbjct: 26  LEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGA 85

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           YS++G F+ +L +F  ML     PN  T  SIL        L+Q  Q+H+ +++S     
Sbjct: 86  YSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESH 145

Query: 412 DSMISCLITTYGKCNALNESK-RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
             + + L+  Y +C +  +S+ +  + + +++ V    +          + +++L+R + 
Sbjct: 146 VVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREML 205

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ--DIFVESAVIDMYCKCGT 528
                 N  TF  +L  C A + LEQG+ IH L +++  +   DI V +  I+MY KCG 
Sbjct: 206 LEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGC 265

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++ A + F ++ R  +  W  M+  Y+Q G +     LF +M   G  P+ +T++++L+ 
Sbjct: 266 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 325

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQ--LEHYACIVD-LLG---RVGLLEGAKMTIDQMP 642
           C    L+ + R        +H L+ +  LE +  + + LLG   R    E ++   D+M 
Sbjct: 326 CEAPSLLEQGR-------QIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMS 378

Query: 643 IPPDAHIWQSLLSACT 658
           +  D+  W +++ AC+
Sbjct: 379 V-RDSVSWSTIIMACS 393


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 199/685 (29%), Positives = 354/685 (51%), Gaps = 36/685 (5%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           +   ++ C  L+    +H   +    S+ V+L +  +  Y K G + SA + F      +
Sbjct: 30  YRDALRQCQDLESVRQIHDR-ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKN 88

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHG 200
           + ++ +M+  Y  NG +  + +++  M    L+ N    T VLGA   ++   EG+ IH 
Sbjct: 89  DYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHS 145

Query: 201 F-----GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAA 254
                 G+K+  +      L N+++ +Y +CG   DA ++F+ ++    V SW+  IAA 
Sbjct: 146 RISGTKGLKLDVI------LENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAY 199

Query: 255 CDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                  EA  L++D+   D + +  T  ++LS+     +L  G++I A     G    +
Sbjct: 200 AQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDL 256

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
           S+ NAL++MY +C  ++DA  IF  L  +D VSW++MIA ++E   F++A++ +  M   
Sbjct: 257 SLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE 316

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF---LLDDSMISCLITTYGKCNAL 428
            + PN YT AS+L A ++   L+    VH  I+ +G+   L++ + +  L T+YG   +L
Sbjct: 317 GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYG---SL 373

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKA 487
           +E++ +  +I+ ++      L             LELYR +  + +       +S V+ A
Sbjct: 374 DEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISA 433

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAG 546
           CA++      +  H          D  + +++++MY + G +E A++ F K+  RD+LA 
Sbjct: 434 CASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA- 492

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART-YLSCM 605
           W  ++ GYA+HG +     L+ +M   G +P E+T++ VL +C HAGL  + +  ++S  
Sbjct: 493 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQ 552

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           SD + + P + HY+CI+DLL R G L  A+  I+ MP+ P+   W SLL A  I+ ++  
Sbjct: 553 SD-YAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKR 611

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
              A  ++ +L P + ++YVLLSN++A  G    +  +R  M  + + K  G SWI V  
Sbjct: 612 ATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVAD 671

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKL 750
             H F  GD+SH + +EI+ EL +L
Sbjct: 672 QIHEFNVGDNSHPRFQEIFAELQRL 696



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/409 (21%), Positives = 187/409 (45%), Gaps = 27/409 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I++L+   G  LD  L   L++ + +      A +       RD+++++A+I+  A   
Sbjct: 242 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 301

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
               A++ + +++ +G+RP+ +TF+S++ AC   G L+    VH   L  G+  ++ LV+
Sbjct: 302 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY--KITLVN 359

Query: 118 G--FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           G   ++ Y   G +  A   F    + D   +T ++ GY   G      E++ EM++   
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 419

Query: 176 ELNE-------FSLTAVLGASFDVKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
                       S  A LGA  D ++    I   G+   F+      L  +++N+Y R G
Sbjct: 420 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV------LATSLVNMYSRWG 473

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLS 284
               A ++FD+++  D ++W+  IA      E   A GL+K++     + +E T + +L 
Sbjct: 474 NLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLY 533

Query: 285 SVGGERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDS 342
           +     +   GKQ+  +          ++  + +I +  + G+++DA  + + + +  + 
Sbjct: 534 ACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPND 593

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNS 390
           V+W+S++     +    +A      + +   + P  Y + S + AV+ +
Sbjct: 594 VTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGN 642


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 181/528 (34%), Positives = 282/528 (53%), Gaps = 5/528 (0%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQI-NEYTMINLLSSVG 287
           A  +F    E DV++W+  + A  +      A   + ++      + + +T  +LL    
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                + GK +     K      + I   L++MY  CG +  AR +F+ +  ++ V W S
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI+GY +N   N+AL ++  M E    P+  TMA+++ A +  K L   M++HSHI +  
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             +   + S L+  Y KC  L  +++V  ++  K+    +AL    V  +   EAL+L+R
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 468 TI-WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
            +  GS    N  T   V+ ACA + DLE G+ +H    + +    + + +++IDM+ KC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G I+ AKR F  +    L  WN+M+ G+A HG   E    F  M    ++PDEIT++ VL
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           T+C HAGLV+E +     +  L+G+  + EHY C+VDLL R GLL  A+  I  MP+ PD
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             IW S+L AC +Y N++LG  A   LL+L+P N+  Y+LLSN+YA   MWN+V K+R+ 
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVREL 510

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           M EK + K PG S + +    H F AGD SH +  EI   L ++ E +
Sbjct: 511 MNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL 558



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 239/519 (46%), Gaps = 59/519 (11%)

Query: 12  HLDPILSTTLISHFTKFADFR--RAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           H  P L+  LI+H           A+     T+  D++T+N+++           AL+ +
Sbjct: 8   HHKPSLNK-LIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSY 66

Query: 70  DRLRYQGLR-PDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
             +  +    PD FTF SL+K C  L E    +++HG  +K    S +Y+ +  +  YA 
Sbjct: 67  TEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAA 126

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G++ SA   F      + V +T+M+ GY+ N   +++  ++ +M   G   +E ++  +
Sbjct: 127 CGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186

Query: 186 LGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           + A  ++K+   G ++H    ++     +C  L +A++N+Y +CG    A ++FD++++ 
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDM--KICAVLGSALVNMYAKCGDLKTARQVFDKLSDK 244

Query: 243 DVVSWSERIAAACDG---VEAFGLFKDLR-FNDFQINEYTMINLLSSVGGERILRAGKQI 298
           DV +WS  I          EA  LF+++   ++ + NE T++ ++S+      L  G+ +
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWV 304

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             +  +      VS+ N+LI M+ KCG ++ A+ IFD + +KD +SWNSM+ G++ +G  
Sbjct: 305 HDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLG 364

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +AL  F  M    L P+  T   +L A S           H+ +++ G           
Sbjct: 365 REALAQFRLMQTTDLQPDEITFIGVLTACS-----------HAGLVQEG----------- 402

Query: 419 ITTYGKCNALNESKRVLSEID-----KKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
                        K++  EI+     +  + H   +  +L  A   AEA E  R +    
Sbjct: 403 -------------KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM---P 446

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
            + +G+ +  +L AC    +LE G+      LK     D
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTND 485



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 194/414 (46%), Gaps = 17/414 (4%)

Query: 305 VGFMEVVSIGNALISMYGKCGQ--VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            GF+      N LI+     G   V  A S+F +    D ++WNSM+  +  +    +AL
Sbjct: 4   TGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRAL 63

Query: 363 DMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             +  MLE S  +P+ +T  S+L+  +     K    +H  ++K     D  + + L+  
Sbjct: 64  QSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNM 123

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y  C  L  ++ +   +  +N V   ++ S  +   C  EAL LY+ +       +  T 
Sbjct: 124 YAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTM 183

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + ++ ACA + DL  G  +H    +        + SA+++MY KCG ++ A++ F K+  
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSD 243

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREAR- 599
             +  W+A++ GY ++    E   LF +++    ++P+E+T LAV+++C   G +   R 
Sbjct: 244 KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRW 303

Query: 600 --TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y++     H +         ++D+  + G ++ AK   D M    D   W S+++  
Sbjct: 304 VHDYITRTQKGHSVSLN----NSLIDMFSKCGDIDAAKRIFDSMSY-KDLISWNSMVNGF 358

Query: 658 TIYGNIDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            ++G +    LA  +L++   LQPD E T++ +    + AG+  +  KL  E++
Sbjct: 359 ALHG-LGREALAQFRLMQTTDLQPD-EITFIGVLTACSHAGLVQEGKKLFYEIE 410



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 181/370 (48%), Gaps = 30/370 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFC 60
           ++  ++K   H D  + TTL++ +    D + A RFLF+   +R+ + + ++ISG  +  
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA-RFLFERMGHRNKVVWTSMISGYMKNH 159

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-------V 113
               AL L+ ++   G  PD  T ++LV AC  L++     GV +KL    R        
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKD----LGVGMKLHSHIREMDMKICA 215

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-S 172
            L S  +  YAK G++ +A   F    D D  A++A++ GYV N    ++ ++F E+   
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGG 275

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  NE ++ AV+ A     D++ G  +H +  +     G    LNN++++++ +CG  
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ--KGHSVSLNNSLIDMFSKCGDI 333

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++FD ++  D++SW+  +   A    G EA   F+ ++  D Q +E T I +L++ 
Sbjct: 334 DAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTAC 393

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNA----LISMYGKCGQVNDARSIFDYLIFK-D 341
               +++ GK++    Y++  +  V + +     ++ +  + G + +AR     +  + D
Sbjct: 394 SHAGLVQEGKKL---FYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 342 SVSWNSMIAG 351
              W SM+  
Sbjct: 451 GAIWGSMLGA 460


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 209/708 (29%), Positives = 349/708 (49%), Gaps = 34/708 (4%)

Query: 80  DAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRV--YLVSGFIENYAKSGEIVSAEM 134
           D       +K+  +L++      +H   L+ G   R    + +  +  YA+ G + +A  
Sbjct: 56  DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115

Query: 135 CFRDCLDL--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL------ 186
            F    D   D V++ +++        +D +      M + G  L  F+L +VL      
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175

Query: 187 -GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EPD 243
             A+  V+ G + H F +K G L G      NA++++Y R G   DA ++F   T    D
Sbjct: 176 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGD 235

Query: 244 VVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VV+W+  ++         EA     D+     + +  T  + L +     +L  G+++ A
Sbjct: 236 VVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHA 295

Query: 301 FCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVS----WNSMIAGYSEN 355
           +  K   +   S + +AL+ MY    QV  AR +FD  +  DS      WN+MI GY++ 
Sbjct: 296 YVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--MVPDSGKQLGMWNAMICGYAQA 353

Query: 356 GFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           G   +AL +F  M  E   +P   TMAS+L A + S++      VH +++K G   +  +
Sbjct: 354 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 413

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y +    + ++R+ + +D  + V  N L +  V     A+A +L R +     
Sbjct: 414 QNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ-QLE 472

Query: 475 E----VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           E     N  T   +L  CA +    +GK IH  A++   D D+ V SA++DMY KCG + 
Sbjct: 473 EGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLA 532

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSC 589
            ++  F ++ R +   WN ++M Y  HG   E + LF++M+  G  +P+E+T++A L +C
Sbjct: 533 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 592

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI-PPDAH 648
            H+G+V         M   HG+ P  +  AC+VD+LGR G L+ A   +  M        
Sbjct: 593 SHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVS 652

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W ++L AC ++ N+ LG +AG +LLEL+P+  S YVLL N+Y++AG W    ++R  M+
Sbjct: 653 AWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMR 712

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            + + KEPG SWI V G  H F AG+S+H  S+E++  +  L+  MVA
Sbjct: 713 RRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVA 760



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 224/467 (47%), Gaps = 36/467 (7%)

Query: 1   QIYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNR-DIITYNALISGL 56
           + ++  +KNG  H         L+S + +      A R F   T  R D++T+N ++S L
Sbjct: 187 EAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVL 246

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSR 112
            +      A++    +   G+RPD  TF+S + AC  L+  ++   +H   +K    ++ 
Sbjct: 247 VQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAAN 306

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV--AYTAMVCGYVWNGEFDKSKEVFVEM 170
            ++ S  ++ YA   ++  A   F    D       + AM+CGY   G  +++  +F  M
Sbjct: 307 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 366

Query: 171 RS-LGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            +  G    E ++ +VL A     +F  KE   +HG+ VK G        + NA+M++Y 
Sbjct: 367 EAEAGFVPCETTMASVLPACARSEAFAGKEA--VHGYVVKRGMAGN--RFVQNALMDMYA 422

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINE----Y 277
           R G+   A ++F  +  PDVVSW+  I      G   +AF L ++++    Q+ E     
Sbjct: 423 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ----QLEEGGVVP 478

Query: 278 TMINLLSSVGGERILRA---GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
             I L++ + G  IL A   GK+I  +  +      V++G+AL+ MY KCG +  +R++F
Sbjct: 479 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 538

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSL 393
           D L  +++++WN +I  Y  +G   +A  +F  M       PN  T  + L A S+S  +
Sbjct: 539 DRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMV 598

Query: 394 KQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            + +Q+ H+     G      +++C++   G+   L+E+  +++ ++
Sbjct: 599 DRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 645



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 125/563 (22%), Positives = 236/563 (41%), Gaps = 36/563 (6%)

Query: 2   IYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLA 57
           I++  ++ G  H   P ++  L++ + +      A        +   D +++N+LIS L 
Sbjct: 79  IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 138

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE-------NEIVHGVCLKLGF- 109
            F +   AL     +   G    +FT  S+++A   L             H   LK G  
Sbjct: 139 LFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLL 198

Query: 110 -SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGYVWNGEFDKSKEV 166
              + +  +  +  YA+ G +  A+  F        D V +  MV   V +G FD++ + 
Sbjct: 199 HGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 258

Query: 167 FVEMRSLGLELNEFSLTAVLGAS-----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
             +M +LG+  +  +  + L A       DV  G ++H + +K   L+   + + +A+++
Sbjct: 259 LYDMVALGVRPDGVTFASALPACSRLELLDV--GREMHAYVIKDDELAA-NSFVASALVD 315

Query: 222 LYVRCGQKLDAVKMFDEITEP--DVVSWSERI---AAACDGVEAFGLFKDLRFN-DFQIN 275
           +Y    Q   A ++FD + +    +  W+  I   A A    EA  LF  +     F   
Sbjct: 316 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 375

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           E TM ++L +          + +  +  K G      + NAL+ MY + G+ + AR IF 
Sbjct: 376 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 435

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF---SLIPNGYTMASILEAVSNSKS 392
            +   D VSWN++I G    G    A  +   M +     ++PN  T+ ++L   +   +
Sbjct: 436 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 495

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
             +  ++H + ++     D ++ S L+  Y KC  L  S+ V   + ++N +  N L   
Sbjct: 496 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 555

Query: 453 LVYASCHAEALELY--RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARY 509
                   EA  L+   T  G  R  N  TF   L AC+    +++G +  H +      
Sbjct: 556 YGMHGLGGEATVLFDRMTASGEARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV 614

Query: 510 DQDIFVESAVIDMYCKCGTIEDA 532
           +    + + V+D+  + G +++A
Sbjct: 615 EPTPDILACVVDILGRAGRLDEA 637


>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 763

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 355/685 (51%), Gaps = 67/685 (9%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
           I ++AK+G++V A   F D + L  V+ +  M+ GY   G++ ++  +   M S  ++ N
Sbjct: 44  IAHHAKTGKLVEARHMF-DEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFN 102

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG-------- 227
           E S +A L A      +  G+QIH    K G+       + +A+++ YV+C         
Sbjct: 103 EVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQR--FGPVGSALLHYYVQCCGIREAEMV 160

Query: 228 -QKL----------------------DAVKMFDEITEPDVVSWSERIAAAC---DGVE-A 260
            ++L                      DA+++F+++   DVV+W+  I+      DG E A
Sbjct: 161 FEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERA 220

Query: 261 FGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
             LF  +R + +   NE+T+  +L      RIL  GK +   C K GF    S+ +AL  
Sbjct: 221 LDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAE 280

Query: 320 MYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN-- 376
            Y     V+DA+ +++ ++ +  S   +S+I G    G   +A  +F  + + +LI N  
Sbjct: 281 FYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNL 340

Query: 377 ---GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
              GY M+   +    SK L + M +  H+         + ++ +IT Y K   L+E+ +
Sbjct: 341 MIKGYAMSGQFK---KSKKLFEKMSL-KHL---------TSLNTMITVYSKNGELDEAVK 387

Query: 434 VLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
           +  +   ++N V  N++ S  ++   H+EAL+LY T+     E + STFS++ +ACA + 
Sbjct: 388 LFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLC 447

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
             +QG+ +H    K  Y ++++V +A++D Y KCG + DA+R+F  I   ++A W A++ 
Sbjct: 448 SFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALIN 507

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           GYA HGC  E  + F  M   GV P+  T++AVL++C HAGLV E   +   M   + + 
Sbjct: 508 GYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRIT 567

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P +EHY C+VDLLGR G ++ A+  I QMPI  D  IW +LL+A   + N++LG  A  K
Sbjct: 568 PTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVK 627

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           L  L P++ S  V LSN+YA  G W    K+RK ++   L K+ G+SWI +    H F  
Sbjct: 628 LFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSV 687

Query: 733 GDSSHSQSKEIYKELIKLYEHMVAT 757
            D++H  S  IYK +    EH+ AT
Sbjct: 688 EDTTHPYSDVIYKTV----EHITAT 708



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 133/577 (23%), Positives = 265/577 (45%), Gaps = 51/577 (8%)

Query: 1   QIYSLLIKNGHHLDP-ILSTTL-ISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLA 57
           Q ++ L++      P ++ST + I+H  K      A R +FD    R + ++N +ISG +
Sbjct: 21  QFFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEA-RHMFDEMPLRTVSSWNTMISGYS 79

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           ++ +   AL L   +    ++ +  +FS+ + AC   GSL   + +H +  K G+     
Sbjct: 80  QWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGP 139

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM---- 170
           + S  +  Y +   I  AEM F +  D ++V ++ M+ GYV       + E+F +M    
Sbjct: 140 VGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRD 199

Query: 171 -----------------------------RSLGLELNEFSLTAVLGASFDVK---EGEQI 198
                                        RS  +  NEF+L  VL     ++    G+ +
Sbjct: 200 VVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVV 259

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV 258
           HG  +K GF     N +++A+   Y       DA ++++ +      + ++ +     G+
Sbjct: 260 HGLCIKDGF--DFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIG---GL 314

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
            + G  K+     + + + T+I+    + G  +    K+ +    K+    + S+ N +I
Sbjct: 315 VSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSL-NTMI 373

Query: 319 SMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           ++Y K G++++A  +FD     ++ V+WNSM++GY  NG  ++AL ++  M  F +  + 
Sbjct: 374 TVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSR 433

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T + +  A +   S +Q   +H+H+ K+ +  +  + + L+  Y KC  L +++R  + 
Sbjct: 434 STFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTS 493

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           I   N     AL +   Y  C +EA+  +R++       N +TF  VL AC+    +++G
Sbjct: 494 IFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEG 553

Query: 498 -KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            K  H + +  R    I   + V+D+  + G +++A+
Sbjct: 554 LKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAE 590



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 222/512 (43%), Gaps = 62/512 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQN-------------- 43
           QI+SLL K+G+     + + L+ ++ +    R A   F  L D  +              
Sbjct: 124 QIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRD 183

Query: 44  --------------RDIITYNALISGLARF---CQSGPALKLFDRLRYQG-LRPDAFTFS 85
                         RD++ +  LISG A+    C+   AL LF  +R    + P+ FT  
Sbjct: 184 MIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCER--ALDLFGCMRRSSEVLPNEFTLD 241

Query: 86  SLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD- 141
            +++ C  L+     ++VHG+C+K GF     + S   E Y  S  +  A+  +   +  
Sbjct: 242 CVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGE 301

Query: 142 -LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHG 200
              NVA  +++ G V  G   ++  +F  +R   L  N   +      S   K+ +++  
Sbjct: 302 ACSNVA-DSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKG-YAMSGQFKKSKKL-- 357

Query: 201 FGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAAC-- 255
                 F      HL   N ++ +Y + G+  +AVK+FD+   E + V+W+  ++     
Sbjct: 358 ------FEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHN 411

Query: 256 -DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            +  EA  L+  +R    + +  T   L  +       + G+ + A   K  + E V +G
Sbjct: 412 GEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVG 471

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
            AL+  Y KCG + DA+  F  +   +  +W ++I GY+ +G  ++A+  F  ML+  ++
Sbjct: 472 TALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVV 531

Query: 375 PNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           PN  T  ++L A S++  + + ++  HS  I           +C++   G+   + E++ 
Sbjct: 532 PNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEE 591

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            + ++  K       +   L+ ASC    +EL
Sbjct: 592 FIIQMPIKAD---GVIWGALLNASCFWNNVEL 620



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 65/322 (20%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  I+ + K G++ +AR +FD +  +   SWN+MI+GYS+ G + +AL +   M    + 
Sbjct: 41  NISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVK 100

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            N  + ++ L A +   SL    Q+HS + KSG+     + S L+  Y +C  + E++ V
Sbjct: 101 FNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMV 160

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTI-------WGSC------RE------ 475
             E+  +N V  + + +  V      +A+E++  +       W +       RE      
Sbjct: 161 FEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERA 220

Query: 476 --------------VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
                          N  T   VL+ CA +  L  GK +H L +K  +D D  V SA+ +
Sbjct: 221 LDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAE 280

Query: 522 MYCKCGTIEDAKRAFRKI-------CRDSLAGW-------------------------NA 549
            YC    ++DAKR +  +         DSL G                          N 
Sbjct: 281 FYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNL 340

Query: 550 MMMGYAQHGCYHEVSNLFNKMS 571
           M+ GYA  G + +   LF KMS
Sbjct: 341 MIKGYAMSGQFKKSKKLFEKMS 362



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 2/189 (1%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT--YGKCNALNESKRVLSEIDKK 441
              VS +   KQ +Q  + ++++       +IS  I+   + K   L E++ +  E+  +
Sbjct: 7   FSPVSTTWKRKQKLQFFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLR 66

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
                N + S       + EAL L   +  SC + N  +FS  L AC     L  GK IH
Sbjct: 67  TVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIH 126

Query: 502 CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYH 561
            L  K+ Y +   V SA++  Y +C  I +A+  F ++  ++   W+ M+ GY Q     
Sbjct: 127 SLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIG 186

Query: 562 EVSNLFNKM 570
           +   +F KM
Sbjct: 187 DAMEIFEKM 195



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%)

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           Y   +   +  I  + K G + +A+  F ++   +++ WN M+ GY+Q G Y E   L +
Sbjct: 33  YPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS 92

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAG 593
            M    VK +E+++ A L++C   G
Sbjct: 93  FMHSSCVKFNEVSFSACLSACTRGG 117


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 209/708 (29%), Positives = 349/708 (49%), Gaps = 34/708 (4%)

Query: 80  DAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRV--YLVSGFIENYAKSGEIVSAEM 134
           D       +K+  +L++      +H   L+ G   R    + +  +  YA+ G + +A  
Sbjct: 58  DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 117

Query: 135 CFRDCLDL--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL------ 186
            F    D   D V++ +++        +D +      M + G  L  F+L +VL      
Sbjct: 118 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 177

Query: 187 -GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EPD 243
             A+  V+ G + H F +K G L G      NA++++Y R G   DA ++F   T    D
Sbjct: 178 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGD 237

Query: 244 VVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VV+W+  ++         EA     D+     + +  T  + L +     +L  G+++ A
Sbjct: 238 VVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHA 297

Query: 301 FCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVS----WNSMIAGYSEN 355
           +  K   +   S + +AL+ MY    QV  AR +FD  +  DS      WN+MI GY++ 
Sbjct: 298 YVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--MVPDSGKQLGMWNAMICGYAQA 355

Query: 356 GFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           G   +AL +F  M  E   +P   TMAS+L A + S++      VH +++K G   +  +
Sbjct: 356 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 415

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW---- 470
            + L+  Y +    + ++R+ + +D  + V  N L +  V     A+A +L R +     
Sbjct: 416 QNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEE 475

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           G     N  T   +L  CA +    +GK IH  A++   D D+ V SA++DMY KCG + 
Sbjct: 476 GGVVP-NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLA 534

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSC 589
            ++  F ++ R +   WN ++M Y  HG   E + LF++M+  G  +P+E+T++A L +C
Sbjct: 535 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 594

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI-PPDAH 648
            H+G+V         M   HG+ P  +  AC+VD+LGR G L+ A   +  M        
Sbjct: 595 SHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVS 654

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W ++L AC ++ N+ LG +AG +LLEL+P+  S YVLL N+Y++AG W    ++R  M+
Sbjct: 655 AWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMR 714

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            + + KEPG SWI V G  H F AG+S+H  S+E++  +  L+  MVA
Sbjct: 715 RRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVA 762



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 224/467 (47%), Gaps = 36/467 (7%)

Query: 1   QIYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNR-DIITYNALISGL 56
           + ++  +KNG  H         L+S + +      A R F   T  R D++T+N ++S L
Sbjct: 189 EAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVL 248

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSR 112
            +      A++    +   G+RPD  TF+S + AC  L+  ++   +H   +K    ++ 
Sbjct: 249 VQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAAN 308

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV--AYTAMVCGYVWNGEFDKSKEVFVEM 170
            ++ S  ++ YA   ++  A   F    D       + AM+CGY   G  +++  +F  M
Sbjct: 309 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 368

Query: 171 RS-LGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            +  G    E ++ +VL A     +F  KE   +HG+ VK G        + NA+M++Y 
Sbjct: 369 EAEAGFVPCETTMASVLPACARSEAFAGKEA--VHGYVVKRGMAGN--RFVQNALMDMYA 424

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINE----Y 277
           R G+   A ++F  +  PDVVSW+  I      G   +AF L ++++    Q+ E     
Sbjct: 425 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ----QLEEGGVVP 480

Query: 278 TMINLLSSVGGERILRA---GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
             I L++ + G  IL A   GK+I  +  +      V++G+AL+ MY KCG +  +R++F
Sbjct: 481 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 540

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSL 393
           D L  +++++WN +I  Y  +G   +A  +F  M       PN  T  + L A S+S  +
Sbjct: 541 DRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMV 600

Query: 394 KQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            + +Q+ H+     G      +++C++   G+   L+E+  +++ ++
Sbjct: 601 DRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 647



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 125/563 (22%), Positives = 236/563 (41%), Gaps = 36/563 (6%)

Query: 2   IYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLA 57
           I++  ++ G  H   P ++  L++ + +      A        +   D +++N+LIS L 
Sbjct: 81  IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 140

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE-------NEIVHGVCLKLGF- 109
            F +   AL     +   G    +FT  S+++A   L             H   LK G  
Sbjct: 141 LFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLL 200

Query: 110 -SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGYVWNGEFDKSKEV 166
              + +  +  +  YA+ G +  A+  F        D V +  MV   V +G FD++ + 
Sbjct: 201 HGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 260

Query: 167 FVEMRSLGLELNEFSLTAVLGAS-----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
             +M +LG+  +  +  + L A       DV  G ++H + +K   L+   + + +A+++
Sbjct: 261 LYDMVALGVRPDGVTFASALPACSRLELLDV--GREMHAYVIKDDELAA-NSFVASALVD 317

Query: 222 LYVRCGQKLDAVKMFDEITEP--DVVSWSERI---AAACDGVEAFGLFKDLRFN-DFQIN 275
           +Y    Q   A ++FD + +    +  W+  I   A A    EA  LF  +     F   
Sbjct: 318 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 377

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           E TM ++L +          + +  +  K G      + NAL+ MY + G+ + AR IF 
Sbjct: 378 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 437

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF---SLIPNGYTMASILEAVSNSKS 392
            +   D VSWN++I G    G    A  +   M +     ++PN  T+ ++L   +   +
Sbjct: 438 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 497

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
             +  ++H + ++     D ++ S L+  Y KC  L  S+ V   + ++N +  N L   
Sbjct: 498 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 557

Query: 453 LVYASCHAEALELY--RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARY 509
                   EA  L+   T  G  R  N  TF   L AC+    +++G +  H +      
Sbjct: 558 YGMHGLGGEATVLFDRMTASGEARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV 616

Query: 510 DQDIFVESAVIDMYCKCGTIEDA 532
           +    + + V+D+  + G +++A
Sbjct: 617 EPTPDILACVVDILGRAGRLDEA 639


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 175/487 (35%), Positives = 270/487 (55%), Gaps = 27/487 (5%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L+    +R  R G+++ A   K  ++  V +   LI +Y KC  + DA ++FD +  ++
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI---------------------PNGYTM 380
            VSW +MI+ YS+ G+ +QAL++F   ++ SL                      PN +T 
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
           A++L + ++S       Q+HS IIK  +     + S L+  Y K   ++E++ V   + +
Sbjct: 369 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 428

Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
           ++ V   A+ S         EALEL+R + G   + N  T++ VL A + +  L+ GK +
Sbjct: 429 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQV 488

Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
           H   L++     + +++++IDMY KCG +  ++R F  +   ++  WNAM++GY++HG  
Sbjct: 489 HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 548

Query: 561 HEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI---PQLE 616
            EV  LF  M  +  VKPD +T LAVL+ C H GL  +     + MS   G I   P++E
Sbjct: 549 REVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSS--GKIEVEPKME 606

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY C+VDLLGR G +E A   I +MP  P A IW SLL AC ++ N+D+G  AG +LLE+
Sbjct: 607 HYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEI 666

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
           +P N   YV+LSNLYASAG W DV  LR  M +K + KEPG S I +    H F+A D S
Sbjct: 667 EPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRS 726

Query: 737 HSQSKEI 743
           H + +EI
Sbjct: 727 HPRREEI 733



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 44/394 (11%)

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           +EG+++H   +K  +L  V   L   ++ LY +C    DA  +FDE+ E +VVSW+  I+
Sbjct: 260 REGQRVHAHMIKTRYLPSV--FLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMIS 317

Query: 253 AACD---GVEAFGLFKDLRFNDFQI-------------------------NEYTMINLLS 284
           A        +A  LF    F D +I                         NE+T   +L+
Sbjct: 318 AYSQRGYASQALNLF----FADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLT 373

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S         G+QI +   K+ + + V +G++L+ MY K G++++AR++F+ L  +D VS
Sbjct: 374 SCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVS 433

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
             ++I+GY++ G   +AL++F  +    +  N  T   +L A+S   +L    QVH+H++
Sbjct: 434 CTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVL 493

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           +S       + + LI  Y KC  L  S+R+   + ++  +  NA+   LV  S H E  E
Sbjct: 494 RSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAM---LVGYSKHGEGRE 550

Query: 465 LYR--TIWGSCREVNGSTFSI--VLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SA 518
           + +  T+     +V   + +I  VL  C+     ++G  I       + + +  +E    
Sbjct: 551 VLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGC 610

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
           V+D+  + G +E+A    +K+  +  A  W +++
Sbjct: 611 VVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 644



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 167/369 (45%), Gaps = 32/369 (8%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           + +E + VH   +K  +   V+L +  I  Y K   +  A   F +  + + V++TAM+ 
Sbjct: 258 AFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMIS 317

Query: 153 GYVWNGEFDKSKEVFVEMRSLGL---------------------ELNEFSLTAVL---GA 188
            Y   G   ++  +F     + L                     E NEF+   VL    +
Sbjct: 318 AYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTS 377

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           S     G QIH   +K+ +   V   + ++++++Y + G+  +A  +F+ + E DVVS +
Sbjct: 378 SLGFILGRQIHSLIIKLNYEDHV--FVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCT 435

Query: 249 ERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I+         EA  LF+ L+    + N  T   +L+++ G   L  GKQ+     + 
Sbjct: 436 AIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS 495

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                V + N+LI MY KCG +  +R IFD +  +  +SWN+M+ GYS++G   + L +F
Sbjct: 496 EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLF 555

Query: 366 CHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTY 422
             M E + + P+  T+ ++L   S+     + + + + +      ++  M    C++   
Sbjct: 556 TLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLL 615

Query: 423 GKCNALNES 431
           G+   + E+
Sbjct: 616 GRSGRVEEA 624



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 23/229 (10%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           +IL    N ++ ++  +VH+H+IK+ +L    + + LI  Y KC++L ++  V  E+ ++
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 307

Query: 442 NAVHINALASVLVYASCHAEALELY----------------------RTIWGSCREVNGS 479
           N V   A+ S        ++AL L+                         W  C E N  
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPW-VCTEPNEF 366

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           TF+ VL +C +      G+ IH L +K  Y+  +FV S+++DMY K G I +A+  F  +
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECL 426

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
               +    A++ GYAQ G   E   LF ++   G+K + +TY  VLT+
Sbjct: 427 PERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTA 475



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 175/387 (45%), Gaps = 40/387 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ +IK  +     L T LI  +TK      A     +   R+++++ A+IS  ++  
Sbjct: 264 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRG 323

Query: 61  QSGPALKLF--------------DRLRYQG-------LRPDAFTFSSLVKACGS---LQE 96
            +  AL LF              D+L+            P+ FTF++++ +C S      
Sbjct: 324 YASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFIL 383

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +H + +KL +   V++ S  ++ YAK G+I  A   F    + D V+ TA++ GY  
Sbjct: 384 GRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQ 443

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGV 211
            G  +++ E+F  ++  G++ N  + T VL      A+ D+  G+Q+H   ++    S V
Sbjct: 444 LGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDL--GKQVHNHVLRSEIPSFV 501

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLR 268
              L N+++++Y +CG    + ++FD + E  V+SW+  +       +G E   LF  +R
Sbjct: 502 V--LQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMR 559

Query: 269 -FNDFQINEYTMINLLSSVGGERILRAGKQI--QAFCYKVGFMEVVSIGNALISMYGKCG 325
                + +  T++ +LS      +   G  I       K+     +     ++ + G+ G
Sbjct: 560 EETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSG 619

Query: 326 QVNDARSIFDYLIFKDSVS-WNSMIAG 351
           +V +A      + F+ + + W S++  
Sbjct: 620 RVEEAFEFIKKMPFEPTAAIWGSLLGA 646



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 36/190 (18%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +L  C       +G+ +H   +K RY   +F+ + +I +Y KC ++ DA   F ++ 
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLF---NKMSKFGV------------------KPDE 579
             ++  W AM+  Y+Q G   +  NLF    K+S  GV                  +P+E
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365

Query: 580 ITYLAVLTSCCHA-GLVREARTYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLE 632
            T+  VLTSC  + G +            +H LI +L +       + ++D+  + G + 
Sbjct: 366 FTFATVLTSCTSSLGFI--------LGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIH 417

Query: 633 GAKMTIDQMP 642
            A+   + +P
Sbjct: 418 EARTVFECLP 427


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 209/708 (29%), Positives = 349/708 (49%), Gaps = 34/708 (4%)

Query: 80  DAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRV--YLVSGFIENYAKSGEIVSAEM 134
           D       +K+  +L++      +H   L+ G   R    + +  +  YA+ G + +A  
Sbjct: 56  DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115

Query: 135 CFRDCLDL--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL------ 186
            F    D   D V++ +++        +D +      M + G  L  F+L +VL      
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175

Query: 187 -GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EPD 243
             A+  V+ G + H F +K G L G      NA++++Y R G   DA ++F   T    D
Sbjct: 176 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGD 235

Query: 244 VVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VV+W+  ++         EA     D+     + +  T  + L +     +L  G+++ A
Sbjct: 236 VVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHA 295

Query: 301 FCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVS----WNSMIAGYSEN 355
           +  K   +   S + +AL+ MY    QV  AR +FD  +  DS      WN+MI GY++ 
Sbjct: 296 YVIKDDELAANSFVASALVDMYATHEQVGKARQVFD--MVPDSGKQLGMWNAMICGYAQA 353

Query: 356 GFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           G   +AL +F  M  E   +P   TMAS+L A + S++      VH +++K G   +  +
Sbjct: 354 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 413

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y +    + ++R+ + +D  + V  N L +  V     A+A +L R +     
Sbjct: 414 QNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ-QLE 472

Query: 475 E----VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           E     N  T   +L  CA +    +GK IH  A++   D D+ V SA++DMY KCG + 
Sbjct: 473 EGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLA 532

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSC 589
            ++  F ++ R +   WN ++M Y  HG   E + LF++M+  G  +P+E+T++A L +C
Sbjct: 533 LSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAAC 592

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI-PPDAH 648
            H+G+V         M   HG+ P  +  AC+VD+LGR G L+ A   +  M        
Sbjct: 593 SHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVS 652

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W ++L AC ++ N+ LG +AG +LLEL+P+  S YVLL N+Y++AG W    ++R  M+
Sbjct: 653 AWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMR 712

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
            + + KEPG SWI V G  H F AG+S+H  S+E++  +  L+  MVA
Sbjct: 713 RRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVA 760



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 224/467 (47%), Gaps = 36/467 (7%)

Query: 1   QIYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFR-FLFDTQNR-DIITYNALISGL 56
           + ++  +KNG  H         L+S + +      A R F   T  R D++T+N ++S L
Sbjct: 187 EAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVL 246

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSR 112
            +      A++    +   G+RPD  TF+S + AC  L+  ++   +H   +K    ++ 
Sbjct: 247 VQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAAN 306

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV--AYTAMVCGYVWNGEFDKSKEVFVEM 170
            ++ S  ++ YA   ++  A   F    D       + AM+CGY   G  +++  +F  M
Sbjct: 307 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 366

Query: 171 RS-LGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
            +  G    E ++ +VL A     +F  KE   +HG+ VK G        + NA+M++Y 
Sbjct: 367 EAEAGFVPCETTMASVLPACARSEAFAGKEA--VHGYVVKRGMAGN--RFVQNALMDMYA 422

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINE----Y 277
           R G+   A ++F  +  PDVVSW+  I      G   +AF L ++++    Q+ E     
Sbjct: 423 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQ----QLEEGGVVP 478

Query: 278 TMINLLSSVGGERILRA---GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
             I L++ + G  IL A   GK+I  +  +      V++G+AL+ MY KCG +  +R++F
Sbjct: 479 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 538

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSL 393
           D L  +++++WN +I  Y  +G   +A  +F  M       PN  T  + L A S+S  +
Sbjct: 539 DRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMV 598

Query: 394 KQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
            + +Q+ H+     G      +++C++   G+   L+E+  +++ ++
Sbjct: 599 DRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSME 645



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 125/563 (22%), Positives = 236/563 (41%), Gaps = 36/563 (6%)

Query: 2   IYSLLIKNG--HHLDPILSTTLISHFTKFADFRRAFRFLFDTQN--RDIITYNALISGLA 57
           I++  ++ G  H   P ++  L++ + +      A        +   D +++N+LIS L 
Sbjct: 79  IHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALC 138

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE-------NEIVHGVCLKLGF- 109
            F +   AL     +   G    +FT  S+++A   L             H   LK G  
Sbjct: 139 LFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLL 198

Query: 110 -SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGYVWNGEFDKSKEV 166
              + +  +  +  YA+ G +  A+  F        D V +  MV   V +G FD++ + 
Sbjct: 199 HGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQT 258

Query: 167 FVEMRSLGLELNEFSLTAVLGAS-----FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
             +M +LG+  +  +  + L A       DV  G ++H + +K   L+   + + +A+++
Sbjct: 259 LYDMVALGVRPDGVTFASALPACSRLELLDV--GREMHAYVIKDDELAA-NSFVASALVD 315

Query: 222 LYVRCGQKLDAVKMFDEITEP--DVVSWSERI---AAACDGVEAFGLFKDLRFN-DFQIN 275
           +Y    Q   A ++FD + +    +  W+  I   A A    EA  LF  +     F   
Sbjct: 316 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 375

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           E TM ++L +          + +  +  K G      + NAL+ MY + G+ + AR IF 
Sbjct: 376 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 435

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF---SLIPNGYTMASILEAVSNSKS 392
            +   D VSWN++I G    G    A  +   M +     ++PN  T+ ++L   +   +
Sbjct: 436 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 495

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
             +  ++H + ++     D ++ S L+  Y KC  L  S+ V   + ++N +  N L   
Sbjct: 496 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 555

Query: 453 LVYASCHAEALELY--RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARY 509
                   EA  L+   T  G  R  N  TF   L AC+    +++G +  H +      
Sbjct: 556 YGMHGLGGEATVLFDRMTASGEARP-NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGV 614

Query: 510 DQDIFVESAVIDMYCKCGTIEDA 532
           +    + + V+D+  + G +++A
Sbjct: 615 EPTPDILACVVDILGRAGRLDEA 637


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 181/572 (31%), Positives = 308/572 (53%), Gaps = 24/572 (4%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIM----NLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
           E + +HG  +K G     C H N  +M    N+Y +CG   DA ++FD +   +VV+W+ 
Sbjct: 85  ETQIVHGHVMKTG-----C-HDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTT 138

Query: 250 RIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            +       +   A  +F+++ +     + YT+  +L +    + L+ G Q  A+  K  
Sbjct: 139 LMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYH 198

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
                S+G+AL S+Y KCG++ DA   F  +  K+ +SW S ++  ++NG   + L +F 
Sbjct: 199 VDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFV 258

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
            M+   + PN +T+ S L       SL+   QV+S  IK G+  +  + + L+  Y K  
Sbjct: 259 EMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSG 318

Query: 427 ALNESKRVLSEIDKKNAVHINAL----ASVLVY-----ASCH--AEALELYRTIWGSCRE 475
            + E+ R+ + +D  + V  NA+    A ++       ++CH  +EAL+L+  +  S  +
Sbjct: 319 CIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMK 378

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T S VL  C+ M  +EQG+ IH   +K  +  D+ V +++I MY KCG+IE A +A
Sbjct: 379 PDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKA 438

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++   ++  W +M+ G++QHG   +  ++F  MS  GV+P+ +T++ VL++C HAG+V
Sbjct: 439 FLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMV 498

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            +A  Y   M   + + P ++HY C+VD+  R+G LE A   I +M   P   IW + ++
Sbjct: 499 SQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIA 558

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
            C  +GN++LG  A  +LL L+P +  TYVLL N+Y SA  + DV ++RK M+E+ + K 
Sbjct: 559 GCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKL 618

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
             +SWI +    + F     +H QS  I K L
Sbjct: 619 KDWSWISIKDKVYSFKTNGKTHPQSSLICKSL 650



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 239/487 (49%), Gaps = 25/487 (5%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           S  E +IVHG  +K G     +++S  +  YAK G +  A   F + L  + VA+T ++ 
Sbjct: 82  SYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMV 141

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVK--VGF 207
           G+V N +   +  VF EM   G   + ++L+AVL A      +K G+Q H + +K  V F
Sbjct: 142 GFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDF 201

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLF 264
            + V     +A+ +LY +CG+  DA+K F  I E +V+SW+  ++A  D    V+   LF
Sbjct: 202 DASV----GSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLF 257

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
            ++   D + NE+T+ + LS       L  G Q+ + C K G+   + + N+L+ +Y K 
Sbjct: 258 VEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKS 317

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF-----------NQALDMFCHMLEFSL 373
           G + +A  +F+ +     V+WN+MIAG+++               ++AL +F  +    +
Sbjct: 318 GCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGM 377

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+ +T++S+L   S   +++Q  Q+H+  IK+GFL D  + + LI+ Y KC ++  + +
Sbjct: 378 KPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASK 437

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              E+  +  +   ++ +         +AL ++  +  +    N  TF  VL AC+    
Sbjct: 438 AFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGM 497

Query: 494 LEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD-SLAGWNAMM 551
           + Q       +  K +    +     ++DM+ + G +E A    +K+  + S   W+  +
Sbjct: 498 VSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFI 557

Query: 552 MGYAQHG 558
            G   HG
Sbjct: 558 AGCKSHG 564



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 261/569 (45%), Gaps = 65/569 (11%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K G H +  + + L++ + K  +   A R   +   R+++ +  L+ G  +  Q
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              A+ +F  + Y G  P  +T S+++ AC SLQ  ++    H   +K        + S 
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y+K G +  A   F    + + +++T+ V     NG   K   +FVEM ++ ++ N
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPN 268

Query: 179 EFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+LT+ L    ++   + G Q++   +K G+ S +   + N+++ LY++ G  ++A ++
Sbjct: 269 EFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNL--RVRNSLLYLYLKSGCIVEAHRL 326

Query: 236 FDEITEPDVVSWSERIA-------------AACD-GVEAFGLFKDLRFNDFQINEYTMIN 281
           F+ + +  +V+W+  IA             +AC  G EA  LF  L  +  + + +T+ +
Sbjct: 327 FNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSS 386

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LS       +  G+QI A   K GF+  V +  +LISMY KCG +  A   F  +  + 
Sbjct: 387 VLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT 446

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            ++W SMI G+S++G   QAL +F  M    + PN  T   +L A S++  + QA+  + 
Sbjct: 447 MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALN-YF 505

Query: 402 HIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
            I++  + +  +M    C++  + +   L ++   L+ I K N                 
Sbjct: 506 EIMQKKYKIKPAMDHYECMVDMFVRLGRLEQA---LNFIKKMN----------------- 545

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG--KAIHCLALKARYDQDIFVES 517
               E    IW           S  +  C +  +LE G   A   L+LK + D + +V  
Sbjct: 546 ---YEPSEFIW-----------SNFIAGCKSHGNLELGFYAAEQLLSLKPK-DPETYV-- 588

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            +++MY      ED  R  RK+  +   G
Sbjct: 589 LLLNMYLSAERFEDVSRV-RKMMEEEKVG 616



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 192/436 (44%), Gaps = 46/436 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ +IK     D  + + L S ++K      A +     + +++I++ + +S  A   
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNG 248

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
                L+LF  +    ++P+ FT +S +  C    SL+    V+ +C+K G+ S + + +
Sbjct: 249 APVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-----------EV 166
             +  Y KSG IV A   F    D   V + AM+ G+    E  K             ++
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKL 368

Query: 167 FVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F ++   G++ + F+L++VL        +++GEQIH   +K GFLS V   ++ +++++Y
Sbjct: 369 FSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVI--VSTSLISMY 426

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMI 280
            +CG    A K F E++   +++W+  I          +A  +F+D+     + N  T +
Sbjct: 427 SKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFV 486

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA------LISMYGKCGQVNDARSIF 334
            +LS+        AG   QA  Y     +   I  A      ++ M+ + G++  A +  
Sbjct: 487 GVLSACS-----HAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFI 541

Query: 335 DYLIFKDS-VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP----------NGYTMASI 383
             + ++ S   W++ IAG   +G  N  L  +      SL P          N Y  A  
Sbjct: 542 KKMNYEPSEFIWSNFIAGCKSHG--NLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAER 599

Query: 384 LEAVSNSKSLKQAMQV 399
            E VS  + + +  +V
Sbjct: 600 FEDVSRVRKMMEEEKV 615



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 105/208 (50%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L+   +++S  +   VH H++K+G   +  ++S L+  Y KC  + +++RV   + ++N
Sbjct: 73  LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            V    L    V  S    A+ +++ +  +    +  T S VL AC+++  L+ G   H 
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHE 562
             +K   D D  V SA+  +Y KCG +EDA + F +I   ++  W + +   A +G   +
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252

Query: 563 VSNLFNKMSKFGVKPDEITYLAVLTSCC 590
              LF +M    +KP+E T  + L+ CC
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCC 280



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 2/184 (1%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L+ C       + + +H   +K     + FV S ++++Y KCG +EDA+R F  + R +
Sbjct: 73  LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           +  W  +M+G+ Q+       ++F +M   G  P   T  AVL +C     ++    + +
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            +   H +       + +  L  + G LE A  T  ++    +   W S +SAC   G  
Sbjct: 193 YIIKYH-VDFDASVGSALCSLYSKCGRLEDALKTFSRIR-EKNVISWTSAVSACADNGAP 250

Query: 664 DLGL 667
             GL
Sbjct: 251 VKGL 254


>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 736

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 300/566 (53%), Gaps = 6/566 (1%)

Query: 195 GEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           G   H    K+    G  N  ++ A++N+Y + G   DA ++FD +   + VSW+  ++ 
Sbjct: 139 GAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSG 198

Query: 254 ACDGV---EAFGLFK-DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
              G    EAF LF+  L+    + NE+    +LS+V     L  G Q+     K G + 
Sbjct: 199 YATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVG 258

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            VS+ N+L++MY K   ++ A  +F     ++S++W++MI GY++NG  N A  MF  M 
Sbjct: 259 FVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMH 318

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
                P  +T   +L A S+  +L    Q H  ++K GF     + S L+  Y KC  + 
Sbjct: 319 SSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIG 378

Query: 430 ESKRVLSEI-DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++K    ++ D  + V   A+ +  V    H EAL LY  +       +  T + VL+AC
Sbjct: 379 DAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRAC 438

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           A +  L+ GK +H   LK R+     V +A+  MY KCG +ED+   FR++    +  WN
Sbjct: 439 ACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWN 498

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++  ++QHG   +  ++F +M   G  PD IT++ +L++C H GLV     Y   M+  
Sbjct: 499 SIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKD 558

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
           + LIP L+HYAC+VD+L R G L+ AK  ID + I     +W+ +L AC    + D+G  
Sbjct: 559 YNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAY 618

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
           AG +L+EL  ++ S Y+LLSN+YA+   WNDV ++R  M+ + + K+ G SW+ +    H
Sbjct: 619 AGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVH 678

Query: 729 HFYAGDSSHSQSKEIYKELIKLYEHM 754
            F  G+  H +++ I  ELI+L +HM
Sbjct: 679 VFVVGEQQHPEAENINVELIRLAKHM 704



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 264/595 (44%), Gaps = 64/595 (10%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           +  FAD   A R        D+ ++N+L++ L+R       +      R     P+A   
Sbjct: 71  YVVFADIPAALR--------DVASWNSLLNPLSRH----HPVSALSHFRSMMSSPEAVLP 118

Query: 85  SS--------LVKACGSLQENEIVHGVCLKLGFS---SRVYLVSGFIENYAKSGEIVSAE 133
           S               S     + H +  KL  S   + V++ +  +  Y K G +  A+
Sbjct: 119 SPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAK 178

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRSLGLELNEFSLTAVLGA---S 189
             F   L  + V++ AMV GY      +++ E+F + ++   LE NEF  TAVL A    
Sbjct: 179 RVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVP 238

Query: 190 FDVKEGEQIHGFGVK---VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             +  G Q+HG  +K   VGF+S     + N+++ +Y +      A+++F    E + ++
Sbjct: 239 LGLLMGTQLHGLVLKDGLVGFVS-----VENSLVTMYAKAECMDAAMRVFGSSKERNSIT 293

Query: 247 WSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  I       E   A  +F  +  + F   E+T + +L++      L  GKQ      
Sbjct: 294 WSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMV 353

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQAL 362
           K+GF   V + +AL+ MY KCG + DA+  F  L    D V W +MI G+ +NG   +AL
Sbjct: 354 KLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEAL 413

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
            ++  M +  +IP+  T+ S+L A +   +L    Q+H+ I+K  F L  S+ + L T Y
Sbjct: 414 MLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMY 473

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  L +S  V   +  ++ +  N++ SV       ++AL+++  +       +  TF 
Sbjct: 474 SKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFI 533

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK------- 533
            +L AC+ M  +++G   +  A+   Y+    ++  + ++D+  + G +++AK       
Sbjct: 534 NLLSACSHMGLVDRGW-FYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSIT 592

Query: 534 ---------------RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
                          R+ R     + AG   M +G      Y  +SN++    K+
Sbjct: 593 IDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKW 647



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 223/474 (47%), Gaps = 35/474 (7%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ- 75
           +ST L++ + K      A R      +R+ +++ A++SG A    S  A +LF RL  Q 
Sbjct: 160 VSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELF-RLMLQK 218

Query: 76  -GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
             L  + F  ++++ A      L     +HG+ LK G    V + +  +  YAK+  + +
Sbjct: 219 CPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F    + +++ ++AM+ GY  NGE + +  +F++M S G    EF+   VL A  D
Sbjct: 279 AMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSD 338

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSW 247
           +     G+Q H   VK+GF + V  ++ +A++++Y +CG   DA   F ++ +  DVV W
Sbjct: 339 MGALVVGKQTHCLMVKLGFETQV--YVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLW 396

Query: 248 SERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  I       +  EA  L+  +       +  T+ ++L +      L  GKQ+ A   K
Sbjct: 397 TAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILK 456

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
             F    S+G AL +MY KCG + D+  +F  +  +D +SWNS+I+ +S++G  + ALDM
Sbjct: 457 CRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDM 516

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTYG 423
           F  M      P+  T  ++L A S+   + +       + K   L+      +C++    
Sbjct: 517 FEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILS 576

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           +   L E+K  +  I              + + +C      L+R + G+CR + 
Sbjct: 577 RAGQLKEAKDFIDSI-------------TIDHGTC------LWRIVLGACRSLR 611



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 192/425 (45%), Gaps = 18/425 (4%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  + + LR +  Q  E+    L  +   +R  R G+ +  +  K G      + N+LI+
Sbjct: 2   ASAVPRALRMSHAQFIEH----LRCAASSDRTPRTGEALHGWALKSGAASHAPVSNSLIT 57

Query: 320 MYGKCGQ--VNDARSIFDYL--IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF--SL 373
            Y    +  +  A  +F  +    +D  SWNS++   S +   + AL  F  M+    ++
Sbjct: 58  FYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLSRHHPVS-ALSHFRSMMSSPEAV 116

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIK--SGFLLDDSMIS-CLITTYGKCNALNE 430
           +P+ ++ A+   A +   S       H+   K  S    ++  +S  L+  Y K  A+++
Sbjct: 117 LPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSD 176

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACA 489
           +KRV   +  +NAV   A+ S      C  EA EL+R +   C  E N    + VL A +
Sbjct: 177 AKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVS 236

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
               L  G  +H L LK      + VE++++ MY K   ++ A R F      +   W+A
Sbjct: 237 VPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSA 296

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG-LVREARTYLSCMSDL 608
           M+ GYAQ+G  +  + +F +M   G  P E T++ VL +C   G LV   +T+  C+   
Sbjct: 297 MITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTH--CLMVK 354

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
            G   Q+   + +VD+  + G +  AK    Q+    D  +W ++++     G  +  L+
Sbjct: 355 LGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALM 414

Query: 669 AGSKL 673
             S++
Sbjct: 415 LYSRM 419



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 51/94 (54%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K    L   + T L + ++K  +   +        +RD+I++N++IS  ++  
Sbjct: 449 QLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHG 508

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           +   AL +F+ ++ +G  PD  TF +L+ AC  +
Sbjct: 509 RGSDALDMFEEMKLEGTAPDHITFINLLSACSHM 542


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 228/775 (29%), Positives = 366/775 (47%), Gaps = 84/775 (10%)

Query: 58  RFCQSGPALK----LFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFS 110
           R C S  AL     L  RL   GL    F  ++L+ A   CG+L +   +    +K    
Sbjct: 12  RSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIK---E 68

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
             V   +  +  YAK G +  AE  F      D  ++  ++ GY     F    E FV M
Sbjct: 69  PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSM 128

Query: 171 RSLGLEL-NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
              G  L N F+   V+   GA    +   Q+ G   K  F       +  A+++++VRC
Sbjct: 129 HRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGD--PDVETALVDMFVRC 186

Query: 227 G---------------------------QKL----DAVKMFDEITEPDVVSWSERIAAAC 255
           G                            KL     A++ F+++ E DVVSW+  IAA  
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 256 DG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 EA GL  ++     +++  T  + L++      L  GKQ+ A   +        
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + +ALI +Y KCG   +A+ +F+ L  ++SVSW  +I G  +   F++++++F  M    
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           +  + + +A+++    N   L    Q+HS  +KSG      + + LI+ Y KC  L  ++
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 433 RVLSEIDKK-------------------------------NAVHINALASVLVYASCHAE 461
            V S + ++                               NA+  NA+    +      +
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEED 486

Query: 462 ALELYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            L++Y  +  S ++V     T+  + + CA +   + G  I    +KA    ++ V +A 
Sbjct: 487 GLKMYSAML-SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAA 545

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           I MY KCG I +A++ F  +    +  WNAM+ GY+QHG   + +  F+ M   G KPD 
Sbjct: 546 ITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 605

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           I+Y+AVL+ C H+GLV+E + Y   M+ +HG+ P LEH++C+VDLLGR G L  AK  ID
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID 665

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +MP+ P A +W +LLSAC I+GN +L  LA   + EL   +  +Y+LL+ +Y+ AG  +D
Sbjct: 666 KMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDD 725

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             ++RK M++K + K PGYSW+ V    H F A D SH Q   I  ++ +L E +
Sbjct: 726 SAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKI 780



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 218/474 (45%), Gaps = 52/474 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++++ + K      A  +  D   RD++++N +I+ L++  +   AL L   +  +G+R
Sbjct: 208 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267

Query: 79  PDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D+ T++S + AC    SL   + +H   ++       Y+ S  IE YAK G    A+  
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F    D ++V++T ++ G +    F KS E+F +MR+  + +++F+L  ++   F   D+
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G Q+H   +K G    +   ++N++++LY +CG   +A  +F  ++E D+VSW+  I 
Sbjct: 388 CLGRQLHSLCLKSGHNRAIV--VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 253 AACD--------------------------------GVEAFGL---FKDLRFNDFQINEY 277
           A                                   G E  GL      L   D   +  
Sbjct: 446 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T + L          + G QI     K G +  VS+ NA I+MY KCG++++A+ +FD L
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA- 396
             KD VSWN+MI GYS++G   QA   F  ML     P+  +  ++L   S+S  +++  
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 397 ----MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
               M    H I  G        SC++   G+   L E+K ++ ++  K    +
Sbjct: 626 LYFDMMTRVHGISPGL----EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEV 675



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 181/394 (45%), Gaps = 45/394 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I++   +DP +++ LI  + K   F+ A R     Q+R+ +++  LI G  ++ 
Sbjct: 291 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 350

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               +++LF+++R + +  D F  ++L+  C +  +      +H +CLK G +  + + +
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 410

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---- 173
             I  YAK G++ +AE  F    + D V++T+M+  Y   G   K++E F  M +     
Sbjct: 411 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAIT 470

Query: 174 -----------GLELNEFSLTAVLGASFDV--------------------KEGEQIHGFG 202
                      G E +   + + + +  DV                    K G+QI G  
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVE 259
           VK G +  V   + NA + +Y +CG+  +A K+FD +   DVVSW+  I        G +
Sbjct: 531 VKAGLILNVS--VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNALI 318
           A   F D+     + +  + + +LS      +++ GK       +V G    +   + ++
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 648

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
            + G+ G + +A+ + D +  K +   W ++++ 
Sbjct: 649 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 99/456 (21%), Positives = 181/456 (39%), Gaps = 78/456 (17%)

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR------ 331
            + + L S G    L   + +      VG    V + N L+  Y  CG ++DAR      
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 332 --------------------------SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                                      +FD +  +D  SWN++++GY +   F   L+ F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 366 CHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
             M      +PN +T   ++++       + A Q+     K  F  D  + + L+  + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 425 CNALNESKRVLSEIDK-------------------------------KNAVHINALASVL 453
           C  ++ + R+ S+I++                               ++ V  N + + L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +    EAL L   +      ++ +T++  L ACA +  L  GK +H   +++    D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V SA+I++Y KCG+ ++AKR F  +   +   W  ++ G  Q+ C+ +   LFN+M   
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIV------DLLGR 627
            +  D+     +++ C +       R  L     LH L  +  H   IV       L  +
Sbjct: 366 LMAIDQFALATLISGCFN-------RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAK 418

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            G L+ A+     M    D   W S+++A +  GNI
Sbjct: 419 CGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGNI 453


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 209/688 (30%), Positives = 341/688 (49%), Gaps = 20/688 (2%)

Query: 84  FSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
           F  L+KA G L    + + +HG  LK GF   +++ +  +  Y K G   +A   F    
Sbjct: 42  FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGLELNEFSLTAVLGASFDVK---EG 195
           + D+V++  M+ G+  +G++ KS  +F  M     G   N  +  A L +   +K    G
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS-----WSER 250
            +IHGF VK G  S     L +A++ +Y++CG   +A  +F+ I + ++V      W+  
Sbjct: 162 LEIHGFLVKKGVDSD--EFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVM 219

Query: 251 I----AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           I    +  C  + A  LF ++       +  T++ +L        L  GKQI      +G
Sbjct: 220 ILGYVSNECLSL-ALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLG 278

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
             + V +G AL+ MY KCG    +  IF      + V W S++   ++NG+ N+AL+ F 
Sbjct: 279 LDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFS 338

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
             +     P+   + + L A S      + M +H   IK GF  D  +   L+  YGKC 
Sbjct: 339 EFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCG 398

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            +  +++V   +  ++ V  NAL S      C  EAL+ +R +     + N  T + +L 
Sbjct: 399 DMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILS 458

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            C  ++ +   K +HC  L+  ++ +  V +++I  Y KCG I  ++  F K+   +   
Sbjct: 459 VCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVT 518

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN++++G+  HG   E+   F KM +  +KPD  T+ ++L+SC H+G V     Y + M 
Sbjct: 519 WNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMM 578

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           + + L P++E Y C+VDLLGR G L  A   I  MP  PD  IW SLL++C  +GN  L 
Sbjct: 579 EDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLA 638

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
            +  + + EL   +    VLL+NLY  +G  N+V ++R ++K+  L K+PG SWI V   
Sbjct: 639 EVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNS 698

Query: 727 THHFYAGDSSHSQSKEIYKELIKLYEHM 754
            H F AGD SH +S +IY  +  L   M
Sbjct: 699 IHIFVAGDYSHDRSGDIYATIESLSLEM 726



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 153/595 (25%), Positives = 264/595 (44%), Gaps = 58/595 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  L+K G   D  +  +L+  + K      A       + RD +++N +ISG   FC
Sbjct: 60  QIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISG---FC 116

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--------------------V 100
           QSG  +K                F  +VK CG    N +                    +
Sbjct: 117 QSGDYVK------------SLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEI 164

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA-----YTAMVCGYV 155
           HG  +K G  S  +LVS  IE Y K G+I +AE  F    D + V      +  M+ GYV
Sbjct: 165 HGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYV 224

Query: 156 WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVC 212
            N     + E+FVEM  LG+  +  ++  VL       D+  G+QIHG  + +G    V 
Sbjct: 225 SNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDV- 283

Query: 213 NHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW-SERIAAACDGV--EAFGLFKDLRF 269
             +  A+M +Y +CG    ++++F      ++V W S  +  A +G   EA   F +   
Sbjct: 284 -RVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFML 342

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
           +    +   ++  L +     +   G  I  F  K+GF   V +G AL+  YGKCG +  
Sbjct: 343 DCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEY 402

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A+ +F  L  +D VSWN++I+G+++N   ++AL  F  M    + PN  TMA IL   ++
Sbjct: 403 AQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTH 462

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
              +    +VH ++++  F  +  + + LI+ Y KC  ++ S+ V  ++  +N V  N  
Sbjct: 463 LSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWN-- 520

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVN----GSTFSIVLKACAAMTDLEQG-KAIHCLA 504
            S+L+    H    E++ T +   +E N      TF+ +L +C+    ++ G K  + + 
Sbjct: 521 -SILLGFGMHGRTDEMFAT-FEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMM 578

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
                +  +   + ++D+  + G +  A      + C      W +++     HG
Sbjct: 579 EDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHG 633



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 14/255 (5%)

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT-MASILEAVSNSKSLKQAMQVHSHII 404
           N MI   +E+GFF  A+ ++   +E       +     +++A      + +  Q+H H++
Sbjct: 7   NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           K GFL D  + + L+  Y KC A   +  +   ++++++V  N + S    +  + ++L 
Sbjct: 67  KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126

Query: 465 LYRTIWGSCREVNGSTFSIV-----LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           ++R +    +E  GS  + V     L +CA++  L  G  IH   +K   D D F+ SA+
Sbjct: 127 MFRRM---VKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSAL 183

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAG-----WNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           I+MY KCG I++A+  F +I  + L G     WN M++GY  + C      LF +M + G
Sbjct: 184 IEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELG 243

Query: 575 VKPDEITYLAVLTSC 589
           + PD  T + VL  C
Sbjct: 244 ISPDSSTVVVVLVLC 258



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/421 (21%), Positives = 185/421 (43%), Gaps = 18/421 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L++  G   D  + T L+  + K  D   + +    +QN +++ + +++   A+  
Sbjct: 269 QIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNG 328

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               AL+ F         PD     + ++AC  L        +HG  +K+GF S V++  
Sbjct: 329 YPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGG 388

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G++  A+  F      D V++ A++ G+  N   D++ + F +M+S  ++ 
Sbjct: 389 ALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKP 448

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++  +L     +      +++H + ++  F +     +NN++++ Y +CG    +  
Sbjct: 449 NTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNAL--VNNSLISAYAKCGDIHSSRT 506

Query: 235 MFDEITEPDVVSW-SERIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+++   + V+W S  +     G   E F  F+ ++  + + +  T  +LLSS      
Sbjct: 507 VFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGK 566

Query: 292 LRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMI 349
           + AG K   +          V     ++ + G+ G +N A   I       D   W S++
Sbjct: 567 VDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLL 626

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYT--MASILEAVSNSKSLKQAMQVHSHIIKSG 407
           A    +G    A  +  H+ E      GY   +A++ E   +S +L +  +V + I + G
Sbjct: 627 ASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYE---DSGNLNEVFRVRTDIKQMG 683

Query: 408 F 408
            
Sbjct: 684 L 684


>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 207/712 (29%), Positives = 347/712 (48%), Gaps = 80/712 (11%)

Query: 18  STTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL 77
           S   I H+ +    R    F+  +   +I  +++L    +    S  A   F RL    +
Sbjct: 86  SAYTIGHYVRTTLPRIGLEFILPSIP-NISVFHSLFKSCSETKDSRWAFITFRRLLESNV 144

Query: 78  RPDAFTFSSLVKAC--------------GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +P   TFS L+KA                 ++ N+I   +  K GF+  VYL + F++ Y
Sbjct: 145 KPSDLTFSLLIKAYVADASSSTVIDSPNTKIEANQIQTHL-RKSGFNQYVYLTTAFLDFY 203

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K G I  A+  F +    D V++ A++CGY  NG    + EVFV+M   G    + +L 
Sbjct: 204 GKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLV 263

Query: 184 AVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
            ++   G    + +G+ IHGFG+K G L   C  + NA+ ++Y +               
Sbjct: 264 GLVPSCGRPDIIFQGKAIHGFGIKSG-LDLDC-RVKNALTSMYAK--------------- 306

Query: 241 EPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
                SW+  I A   +G+  EA  +FK ++    ++N  T+I                 
Sbjct: 307 ----FSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTII----------------- 345

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
                               +  Y  CG +  A  +++ +  ++ VS  +MI+GY+E G 
Sbjct: 346 --------------------MCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGN 385

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
               ++ F  ML+  + P+   M SIL   ++   +   + +H++ +K+G   D  +++ 
Sbjct: 386 MGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNG 445

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI+ Y K   +     + SE+ +K  +  N++ S  +     ++A+EL+  +       +
Sbjct: 446 LISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPD 505

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T + +L  C+ +  L+ G+ +H   L+   D + F+E+A++DMY KCG +E A+R F+
Sbjct: 506 AITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFK 565

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
            I    LA WN M+ GY   G  H   + +++M + G+KPD IT+L VL++C H GLV E
Sbjct: 566 SIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWE 625

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            + Y   M +  G+IP L+H AC+VDLL R G LE A + +  M + PD+ IW +LL++C
Sbjct: 626 GKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSC 685

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
            I+  + LG     +LL L   +   YVL+SNLYAS G W+DV ++RK MK+
Sbjct: 686 CIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMKD 737



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 188/444 (42%), Gaps = 58/444 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI + L K+G +    L+T  +  + K      A     +   RD++++NALI G +R  
Sbjct: 179 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 238

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFS------- 110
               AL++F ++  +G  P   T   LV +CG    + + + +HG  +K G         
Sbjct: 239 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 298

Query: 111 --------------------------------------SRVYLVSGFIENYAKSGEIVSA 132
                                                   V  V+  + +YA  G I SA
Sbjct: 299 ALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESA 358

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
            + +      + V+ TAM+ GY   G      E F +M  L ++ +  ++ ++L    D 
Sbjct: 359 GLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDP 418

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             +  G  IH +G+K G  +     + N ++++Y + G       +F E+ E  ++SW+ 
Sbjct: 419 TFIGSGLGIHAYGLKTGLCADCL--VVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNS 476

Query: 250 RIAAACDGV----EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
            I +AC  V    +A  LF  +R      +  T+ +LL+       L+ G+++  +  + 
Sbjct: 477 VI-SACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRN 535

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                  +  AL+ MY KCG++  A  +F  +      +WN+MI+GY  +G  ++AL  +
Sbjct: 536 NLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCY 595

Query: 366 CHMLEFSLIPNGYTMASILEAVSN 389
             M E  L P+  T   +L A ++
Sbjct: 596 SEMQEQGLKPDRITFLGVLSACTH 619



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 10/262 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  +K G   D ++   LIS ++KF D    F    +   + +I++N++IS   +  +
Sbjct: 427 IHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGR 486

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           +  A++LF ++R  G  PDA T +SL+  C   G LQ  E +H   L+       +L + 
Sbjct: 487 TSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETA 546

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G + SAE  F+   +     +  M+ GY  +G   ++   + EM+  GL+ +
Sbjct: 547 LVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPD 606

Query: 179 EFSLTAVLGASFD---VKEGEQ-IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
             +   VL A      V EG++         G + G+    N  +++L  R G   +AV 
Sbjct: 607 RITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGL--QHNACMVDLLSRAGFLEEAVI 664

Query: 235 MFDEI-TEPDVVSWSERIAAAC 255
               +  EPD   W   + + C
Sbjct: 665 FVKNMEVEPDSAIWGALLTSCC 686


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 194/671 (28%), Positives = 338/671 (50%), Gaps = 12/671 (1%)

Query: 83  TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           T S L   C S+Q  + +H   +  GF     L S  I+ YA  G +  +   F   +D 
Sbjct: 29  TLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDP 88

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--SF-DVKEGEQIH 199
           +   + A++      GE +++  V+ +M +  +  +E +   VL +  SF +V  G  IH
Sbjct: 89  NLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIH 148

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---- 255
           G+ VK+GF   + + +  A+  +Y  C +  +A ++FD+ +  D+  W   +        
Sbjct: 149 GYLVKLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDL-GWPSSLTTEGPQND 205

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +G   F +F  +       + +T  NLL  + G   ++  K +            + +  
Sbjct: 206 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNT 265

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           A++S+Y K   + DAR +FD +  KD V WN MIA Y+  G   + L++F  M    +  
Sbjct: 266 AVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRS 325

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           + +T   ++ +++  K +    Q H+HI+++G     S+ + LI  Y +C  L+ + ++ 
Sbjct: 326 DLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIF 385

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           + +  K+ +  +A+    V       AL L+  +     + +      +L A   +  LE
Sbjct: 386 NWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALE 445

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMG 553
             K +H  ++K        + +A++  Y KCG+IE A+R F   KI    L  WN+M+  
Sbjct: 446 NVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISA 505

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           +A HG + +   L+N+M     KPD++T+L +LT+C ++GLV + + +   M++ +G  P
Sbjct: 506 HANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQP 565

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EHYAC+V+LLGR GL+  A   +  MPI PDA +W  LLSAC ++    L   A  KL
Sbjct: 566 SQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKL 625

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           + ++P N   Y+LLSN+YA+AG W+ V K+R  ++ K L K PG SW+ + G+   F   
Sbjct: 626 INMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVA 685

Query: 734 DSSHSQSKEIY 744
           D +H ++ +IY
Sbjct: 686 DQTHPRAGDIY 696



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 247/510 (48%), Gaps = 15/510 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  I +G H +P LS+ LI  +        + +      + ++  +NA++  L R+ 
Sbjct: 45  QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYG 104

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +S   L ++ ++  + + PD  T+  ++++C S         +HG  +KLGF     + +
Sbjct: 105 ESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVAT 164

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAY-TAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              E Y +  E  +A   F D   + ++ + +++      N   +    VF  M +  L 
Sbjct: 165 ALAEMYEECIEFENAHQLF-DKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLV 223

Query: 177 LNEFS---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+   L   +     ++  + +H   + V  LSG    +N A+++LY +    +DA 
Sbjct: 224 PDSFTFFNLLRFIAGLNSIQLAKIVHCIAI-VSKLSGDL-LVNTAVLSLYSKLRSLVDAR 281

Query: 234 KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FD++ E D V W+  IAA A +G   E   LFK +  +  + + +T + ++SS+   +
Sbjct: 282 KLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLK 341

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  GKQ  A   + G    VS+ N+LI MY +C  ++ A  IF+++  K  +SW++MI 
Sbjct: 342 CVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIK 401

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY +NG    AL +F  M    +  +   M +IL A  +  +L+    +H + +K G   
Sbjct: 402 GYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTS 461

Query: 411 DDSMISCLITTYGKCNALNESKRVLSE--IDKKNAVHINALASVLVYASCHAEALELYRT 468
             S+ + L+ TY KC ++  ++R+  E  ID K+ +  N++ S        ++  +LY  
Sbjct: 462 LPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNR 521

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           +  S  + +  TF  +L AC     +E+GK
Sbjct: 522 MKCSNSKPDQVTFLGLLTACVNSGLVEKGK 551


>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
 gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
          Length = 745

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 305/578 (52%), Gaps = 23/578 (3%)

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            SL A  G +  V+   Q+H    + G  + V   + NA++  Y R G    A K+F+E+
Sbjct: 155 LSLAAGRGEAHLVR---QLHALASRAGIATDV--FVGNALVTAYSRGGLMDAARKVFEEM 209

Query: 240 TEPDVVSWSERIAA-ACDG---VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRA 294
              D+VSW+  +   A DG    E   +F + L+  D + +  ++ +++ + G E  L  
Sbjct: 210 PARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLEL 269

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G+QI  F  K+G    VSI N L++MY KCG    AR +F+++  +D +SW ++++   E
Sbjct: 270 GRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMSMDGE 329

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +     A+ +F  M    + PN  T  ++L ++      ++   +H+  +K+      + 
Sbjct: 330 D-----AVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAA 384

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + LIT Y K   +++++ + S +     +  NAL S         +ALE +  +     
Sbjct: 385 ANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMM-KIM 443

Query: 475 EVNGSTFSIVLKACAAM--TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
           + N +TF+ +L A  A+    +  G+  HC ALK       +V  A+IDMY K G++E++
Sbjct: 444 KPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEES 503

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
            +AF +    SL  W A++   ++HG Y  V +LFN M   GV PD +  L+VLT+C ++
Sbjct: 504 WKAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYS 563

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G V   R     M+  HG     EHYAC+VD+LGR G LE A+  + QMP  P     QS
Sbjct: 564 GFVSLGREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSALQS 623

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           LL AC I+GN D+G    S L E +P     YVLLSN+YA  G W  V ++R++M+E+ +
Sbjct: 624 LLGACRIHGNTDVGERVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERGV 683

Query: 713 CKEPGYSWIHVGG-----YTHHFYAGDSSHSQSKEIYK 745
            KE G+SW+  GG     + + F + D++H QS+EIY+
Sbjct: 684 KKEVGFSWVDAGGAGDSLHLYKFSSDDTTHPQSEEIYR 721



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 268/544 (49%), Gaps = 22/544 (4%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           ++L + +G      ++ +L + + K   F  A R     ++RD  +YN ++S        
Sbjct: 72  HALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATP---DP 128

Query: 63  GPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIV---HGVCLKLGFSSRVYLVSG 118
             AL    R LR   +RPDA TF+  +       E  +V   H +  + G ++ V++ + 
Sbjct: 129 DDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNA 188

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFVEMRSLG-LE 176
            +  Y++ G + +A   F +    D V++ A+VCG   +GE       VF+ M   G + 
Sbjct: 189 LVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVR 248

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  S+ +V+   GA   ++ G QIHGF VK+G    V   + N ++ +Y +CG    A 
Sbjct: 249 PDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVS--IANVLVAMYYKCGTPGCAR 306

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           ++F+ + E DV+SW+  +  + DG +A  LF  +R +    NE T + +LSS+ G+   R
Sbjct: 307 RLFEFMGERDVISWTTVM--SMDGEDAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAR 364

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+ I A C K    +  +  N+LI+MY K  +++DAR IF  +   + ++WN++I+GY+
Sbjct: 365 EGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYA 424

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA--MQVHSHIIKSGFLLD 411
           +N     AL+ F  M++  + PN  T ASIL AV+  +++  A     H   +K G    
Sbjct: 425 QNEMCQDALEAFLAMMKI-MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGAS 483

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           + +   LI  Y K  +L ES +   E   ++ +   A+ S       +   + L+  + G
Sbjct: 484 EYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVG 543

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
           S    +G     VL AC     +  G+ I   ++ A++  +++ E  + V+DM  + G +
Sbjct: 544 SGVAPDGVVLLSVLTACRYSGFVSLGREIFD-SMAAKHGAELWPEHYACVVDMLGRAGRL 602

Query: 530 EDAK 533
           E+A+
Sbjct: 603 EEAE 606



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 224/472 (47%), Gaps = 34/472 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++L  + G   D  +   L++ +++      A +   +   RD++++NAL+ GLA+  
Sbjct: 169 QLHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDG 228

Query: 61  Q-SGPALKLFDRLRYQG-LRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
           + S   +++F R+  QG +RPD  +  S++ ACG+   L+    +HG  +KLG    V +
Sbjct: 229 ECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSI 288

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y K G    A   F    + D +++T ++     +GE   +  +F  MR  G+
Sbjct: 289 ANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS---MDGE--DAVSLFNGMRRDGV 343

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             NE +  A+L +       +EG+ IH   +K            N+++ +Y +  +  DA
Sbjct: 344 APNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAA--ANSLITMYAKLRRMDDA 401

Query: 233 VKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             +F  +   ++++W+  I+         D +EAF     +     + NE T  ++LS+V
Sbjct: 402 RMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKI----MKPNETTFASILSAV 457

Query: 287 GG-ERILRAGKQI---QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
              E +  A  Q+   QA    +G  E VS   ALI MY K G + ++   F   + +  
Sbjct: 458 TAVETVSMAYGQMYHCQALKLGLGASEYVS--GALIDMYAKRGSLEESWKAFGETVHRSL 515

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HS 401
           ++W ++I+  S++G ++  + +F  M+   + P+G  + S+L A   S  +    ++  S
Sbjct: 516 IAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDS 575

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
              K G  L     +C++   G+   L E++ ++ ++    +V  +AL S+L
Sbjct: 576 MAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSV--SALQSLL 625


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 205/656 (31%), Positives = 340/656 (51%), Gaps = 19/656 (2%)

Query: 84  FSSLVKACGS---LQENEIVHGVCLKLGFSSRVY---LVSGFIENYAKSGEIVSAEMCFR 137
           + SL++ C S   +   + +H   + LG  S  Y   L+S     YA  G    A   F 
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-NEFSLTAVLGASFD---VK 193
           +  +    ++ AM+  Y  +G    +  +FV+M + G    + ++   V+ A  D    +
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G  IH   V  GF S     + N++M +Y+ CG+   A ++FD + E  +VSW+  I  
Sbjct: 141 MGALIHARTVMSGFDSDA--FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMING 198

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   EA  +F  +     + +  T++++L      + L  G+++ A        E 
Sbjct: 199 YFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGED 258

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           +S+ N+L+ MY KCG +++A+ IF  +  +D VSW +M+ GY  NG    AL + C M++
Sbjct: 259 ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQ 317

Query: 371 F-SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           F S+ PN  T+AS+L A ++  SLK    +H   I+     +  + + LI  Y KCN +N
Sbjct: 318 FESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN 377

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            S RV S+  K+     NA+ S  ++     +A+EL++ +     + N +T + +L A A
Sbjct: 378 LSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS--LAGW 547
            +TDL+Q + +H   +++ +   I V + +ID+Y KCG++E A   F  I +    +  W
Sbjct: 438 FLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITW 497

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           +A++ GY  HG      +LF++M + GVKP+EIT+ ++L +C HAGLV E       M +
Sbjct: 498 SAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            + +  + +HY C++DLLGR G LE A   I  M   P+  +W +LL +C I+ N++LG 
Sbjct: 558 DNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGE 617

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           +A   L EL+P N   YVLL+N+Y++ G W D   +R  M    L K P +S I V
Sbjct: 618 VAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 269/558 (48%), Gaps = 26/558 (4%)

Query: 11  HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFD 70
           HHL     ++L + +  F     A +   + +N  + ++NA+I        S  AL LF 
Sbjct: 56  HHL----LSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFV 111

Query: 71  RLRYQGLR-PDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKS 126
           ++   G R PD +T+  ++KACG     E   ++H   +  GF S  ++ +  +  Y   
Sbjct: 112 QMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNC 171

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           GE+  A   F    +   V++  M+ GY  NG   ++  VF  M   G+E +  ++ +VL
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVL 231

Query: 187 GASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
                +KE   G ++H   V+V  L G    + N+++++Y +CG   +A  +F E+ + D
Sbjct: 232 PVCSYLKELEVGRRVHAL-VEVKNL-GEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289

Query: 244 VVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VVSW+  +       D   A  L + ++F   + N  T+ ++LS+      L+ G+ +  
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
           +  +      V +  ALI MY KC  VN +  +F     + +  WN++I+G   NG   +
Sbjct: 350 WAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRK 409

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           A+++F  ML  ++ PN  T+ S+L A +    L+QA  +H ++I+SGFL    + + LI 
Sbjct: 410 AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILID 469

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA-SCHAE-ALELYRTIWGSCREVNG 478
            Y KC +L  +  + + I KK+   I   A +  Y    H E A+ L+  +  S  + N 
Sbjct: 470 IYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNE 529

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKCGTIEDAKR 534
            TF+ +L AC+    +++G  +    L+   D  + +     + VID+  + G +E+A  
Sbjct: 530 ITFTSILHACSHAGLVDEGLGLFKFMLE---DNQMSLRTDHYTCVIDLLGRAGRLEEAYE 586

Query: 535 AFRKIC-RDSLAGWNAMM 551
             R +  R + A W A++
Sbjct: 587 LIRTMAFRPNHAVWGALL 604



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 221/452 (48%), Gaps = 26/452 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  + +G   D  +  +L++ +    +   A R     + R ++++N +I+G  +   
Sbjct: 145 IHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              AL +FD +  +G+ PD  T  S++  C  L+E E+   VH +         + + + 
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A+M F +    D V++T M+ GY+ NG+   +  +   M+   ++ N
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324

Query: 179 EFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L +VL A    + +K G  +HG+ ++    S V   +  A++++Y +C     + ++
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVI--VETALIDMYAKCNNVNLSFRV 382

Query: 236 FDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F + ++     W+  I+    +G+  +A  LFK +       N+ T+ +LL +      L
Sbjct: 383 FSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDL 442

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIA 350
           +  + +  +  + GF+  + +   LI +Y KCG +  A +IF+ +  KD   ++W+++IA
Sbjct: 443 QQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIA 502

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY  +G    A+ +F  M++  + PN  T  SIL A S++  + + + +        F+L
Sbjct: 503 GYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFK------FML 556

Query: 411 DDSMIS-------CLITTYGKCNALNESKRVL 435
           +D+ +S       C+I   G+   L E+  ++
Sbjct: 557 EDNQMSLRTDHYTCVIDLLGRAGRLEEAYELI 588


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 174/458 (37%), Positives = 257/458 (56%), Gaps = 5/458 (1%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ GK +        F   + I N+++ MY KCG +  AR +FD +  KD V+W SMI G
Sbjct: 107 LKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITG 166

Query: 352 YSENGFFNQA---LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           YS++G+ + A   L +F  M+   L PN + ++S+++      S     Q+H    K GF
Sbjct: 167 YSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGF 226

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + S L+  Y +C  L ES+ V  E++ KN V  NAL S         EAL L+  
Sbjct: 227 QENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVK 286

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +          T+S +L + +    LEQGK +H   +K+      +V + ++ MY K G 
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLT 587
           I DAK+ F ++ +  +   N+M++GYAQHG   E   LF +M  +  ++P++IT+L+VLT
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAGL+ E   Y   M   +GL P+L HY  +VDL GR GLL+ AK  I++MPI P+A
Sbjct: 407 ACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNA 465

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            IW +LL A  ++ N ++G  A  K+LEL P     + LLSN+YASAG W DV K+RKEM
Sbjct: 466 TIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEM 525

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           K+  L KEP  SW+ +    H F A D SH Q  ++Y+
Sbjct: 526 KDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYE 563



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 205/406 (50%), Gaps = 22/406 (5%)

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            S   L + D +    L PD   ++ L+K C   G L++ ++VH   +   F + + + +
Sbjct: 71  NSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKN 130

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE---VFVEMRSLG 174
             +  YAK G +  A   F +    D V +T+M+ GY  +G    +     +F+EM   G
Sbjct: 131 SILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDG 190

Query: 175 LELNEFSLTAV------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           L  NEF+L+++      LG+  D   G+QIHG   K GF   V   + ++++++Y RCG+
Sbjct: 191 LRPNEFALSSLVKCCGFLGSCVD---GKQIHGCCWKYGFQENV--FVGSSLVDMYARCGE 245

Query: 229 KLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             ++  +FDE+   + VSW+  I   A   +G EA GLF  ++   F   E+T   LL S
Sbjct: 246 LRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 L  GK + A   K G   V  +GN L+ MY K G + DA+ +FD L+  D VS 
Sbjct: 306 SSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSC 365

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           NSM+ GY+++G   +A+++F  M+ +  I PN  T  S+L A S++  L + +     + 
Sbjct: 366 NSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK 425

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINAL 449
           K G     S  + ++  +G+   L+++K  + E+  + NA    AL
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGAL 471



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 188/364 (51%), Gaps = 16/364 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR--- 58
           +++ L+ +    D ++  +++  + K      A +   +   +D++T+ ++I+G ++   
Sbjct: 113 VHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGY 172

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
              +  AL LF  +   GLRP+ F  SSLVK C   GS  + + +HG C K GF   V++
Sbjct: 173 ASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFV 232

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            S  ++ YA+ GE+  + + F +    + V++ A++ G+   GE +++  +FV+M+  G 
Sbjct: 233 GSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGF 292

Query: 176 ELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
              EF+ +A+L +S     +++G+ +H   +K G    +  ++ N ++++Y + G   DA
Sbjct: 293 GATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG--KKLVGYVGNTLLHMYAKSGNICDA 350

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR-FNDFQINEYTMINLLSSVGG 288
            K+FD + + DVVS +  +        G EA  LF+++  + + + N+ T +++L++   
Sbjct: 351 KKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSH 410

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNS 347
             +L  G        K G    +S    ++ ++G+ G ++ A+S  + + I  ++  W +
Sbjct: 411 AGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGA 470

Query: 348 MIAG 351
           ++  
Sbjct: 471 LLGA 474



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 173/399 (43%), Gaps = 59/399 (14%)

Query: 367 HMLEFSLIPNGYTMASILEAVSNSK-------------------SLKQAMQVHSHIIKSG 407
           ++L  SL PN  T   +L+ ++N                      LKQ   VH+H++ S 
Sbjct: 62  NLLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSK 121

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV---YASCHAEALE 464
           F  D  + + ++  Y KC +L  +++V  E+  K+ V   ++ +      YAS    AL 
Sbjct: 122 FRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALV 181

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +       N    S ++K C  +     GK IH    K  + +++FV S+++DMY 
Sbjct: 182 LFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYA 241

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           +CG + +++  F ++   +   WNA++ G+A+ G   E   LF KM + G    E TY A
Sbjct: 242 RCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSA 301

Query: 585 VLTSCCHAGLVREARTYLSCM----SDLHGLIPQ--LEHYA-----C----IVDLLGRVG 629
           +L S    G + + +   + M      L G +    L  YA     C    + D L +V 
Sbjct: 302 LLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVD 361

Query: 630 LLEGAKMTI---------------DQM----PIPPDAHIWQSLLSACTIYGNIDLGL--L 668
           ++    M I               ++M     I P+   + S+L+AC+  G +D GL   
Sbjct: 362 VVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYF 421

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
              K   L+P   S Y  + +L+  AG+ +      +EM
Sbjct: 422 ELMKKYGLEP-KLSHYTTVVDLFGRAGLLDQAKSFIEEM 459



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 19/302 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           QI+    K G   +  + ++L+  + +  + R + R +FD  ++++ +++NALISG AR 
Sbjct: 216 QIHGCCWKYGFQENVFVGSSLVDMYARCGELRES-RLVFDELESKNEVSWNALISGFARK 274

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLV---KACGSLQENEIVHGVCLKLGFSSRVYLV 116
            +   AL LF +++ +G     FT+S+L+      GSL++ + +H   +K G     Y+ 
Sbjct: 275 GEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVG 334

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGL 175
           +  +  YAKSG I  A+  F   + +D V+  +M+ GY  +G   ++ E+F EM   + +
Sbjct: 335 NTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEI 394

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E N+ +  +VL A      + EG        K G    + ++    +++L+ R G  LD 
Sbjct: 395 EPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHY--TTVVDLFGRAGL-LDQ 451

Query: 233 VKMFDE--ITEPDVVSWSERIAAA----CDGVEAFGLFKDLRFNDFQINEYTMI-NLLSS 285
            K F E    EP+   W   + A+       + A+   K L  + F    +T++ N+ +S
Sbjct: 452 AKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYAS 511

Query: 286 VG 287
            G
Sbjct: 512 AG 513



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 134/283 (47%), Gaps = 17/283 (6%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E + + ++ +LK C  +  L+QGK +H   + +++  D+ ++++++ MY KCG++E A++
Sbjct: 88  EPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQ 147

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSN---LFNKMSKFGVKPDEITYLAVLTSCCH 591
            F ++C   +  W +M+ GY+Q G     +    LF +M + G++P+E    +++  C  
Sbjct: 148 VFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGF 207

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
            G   + +    C    +G    +   + +VD+  R G L  +++  D++    +   W 
Sbjct: 208 LGSCVDGKQIHGCCWK-YGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVS-WN 265

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPD----NESTYVLLSNLYASAGMWNDVGKLRKEM 707
           +L+S     G    G  A    +++Q +     E TY  L    ++ G   + GK     
Sbjct: 266 ALISGFARKGE---GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSL-EQGKWLHAH 321

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
             K   K  GY    VG    H YA   +   +K+++  L+K+
Sbjct: 322 MMKSGKKLVGY----VGNTLLHMYAKSGNICDAKKVFDRLVKV 360


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 166/472 (35%), Positives = 265/472 (56%), Gaps = 2/472 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++L+    +R +R G+++     K  ++  V +   LI +Y KC  + DAR +FD +  +
Sbjct: 67  SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + VSW +MI+ YS+ GF  +AL++F  ML     PN +T A+IL +   S   +   Q+H
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           S  IK  +     + S L+  Y K   + ++  V   + +++ V   A+ S         
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EAL+L+R +       N  T++ VL A + +  L  GK +H   L++     + + +++I
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDE 579
           DMY KCG +  A+R F  +   +   WNAM++GY++HG   EV  LF  M +   VKPD 
Sbjct: 307 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 366

Query: 580 ITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
           ITYLAVL+ C H  L       + + ++   G+ P + HY C+VDLLGR G +E A   I
Sbjct: 367 ITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFI 426

Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
            +MP  P A IW SLL +C ++ ++++G++ G KLLEL+P+N   YV+LSNLYASAG W 
Sbjct: 427 KKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWE 486

Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           D+  +R  M+EK + KEPG SW+ +    H F+A D +H + +E+  ++ +L
Sbjct: 487 DMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKEL 538



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 196/388 (50%), Gaps = 17/388 (4%)

Query: 164 KEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
           KE  ++M  LG E+      ++L    +   ++EG+++H   +K  +L  V  +L   ++
Sbjct: 47  KEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSV--YLRTRLI 104

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEY 277
            LY +C    DA  MFDE+ + +VVSW+  I+A        EA  LF ++  +D + N +
Sbjct: 105 VLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHF 164

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T   +L+S  G      G+QI +   K  +   + +G++L+ MY K G++ DA  +F  L
Sbjct: 165 TFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCL 224

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             +D V+  ++I+GY++ G   +AL +F  +    +  N  T AS+L A+S   +L    
Sbjct: 225 PERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGK 284

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           QVHSH+++SG      +++ LI  Y KC  +  ++R+   + ++  +  NA+   LV  S
Sbjct: 285 QVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAM---LVGYS 341

Query: 458 CHA---EALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAI--HCLALKARYDQ 511
            H    E LEL++ +    + + +  T+  VL  C+     + G  I  + +  K   + 
Sbjct: 342 KHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEP 401

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           DI     V+D+  + G +E+A    +K+
Sbjct: 402 DIGHYGCVVDLLGRAGRVEEAFDFIKKM 429



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 184/388 (47%), Gaps = 14/388 (3%)

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSR 112
           L   C SG   +   ++   G       + S++  C S   ++E + VH   +K  +   
Sbjct: 37  LKTLCSSGQLKEALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPS 96

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           VYL +  I  Y K   +  A   F +    + V++TAM+  Y   G   ++  +FVEM  
Sbjct: 97  VYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLR 156

Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
              E N F+   +L +   S   + G QIH   +K  + S +   + ++++++Y + G+ 
Sbjct: 157 SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHM--FVGSSLLDMYAKSGRI 214

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA  +F  + E DVV+ +  I+         EA  LF+ L+      N  T  ++L+++
Sbjct: 215 CDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTAL 274

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G   L  GKQ+ +   + G    V + N+LI MY KCG V  AR IFD +  +  +SWN
Sbjct: 275 SGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWN 334

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII- 404
           +M+ GYS++G   + L++F  M E + + P+  T  ++L   S+ +     +++  +++ 
Sbjct: 335 AMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVN 394

Query: 405 -KSGFLLDDSMISCLITTYGKCNALNES 431
            K G   D     C++   G+   + E+
Sbjct: 395 GKDGIEPDIGHYGCVVDLLGRAGRVEEA 422



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 198/433 (45%), Gaps = 25/433 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           ++++ +IK  +     L T LI  + K  D     R +FD    R+++++ A+IS  ++ 
Sbjct: 83  RVHTHMIKTCYLPSVYLRTRLIVLYNK-CDCLGDARGMFDEMPQRNVVSWTAMISAYSQR 141

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GSL--QENEIVHGVCLKLGFSSRVYLV 116
             +  AL LF  +      P+ FTF++++ +C GSL  +    +H + +K  + S +++ 
Sbjct: 142 GFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG 201

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAKSG I  A   F    + D VA TA++ GY   G  +++ ++F +++  G+ 
Sbjct: 202 SSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMN 261

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +  +VL A      +  G+Q+H   ++ G  S V   L N+++++Y +CG    A 
Sbjct: 262 SNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVV--LLNSLIDMYSKCGNVCYAR 319

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR-FNDFQINEYTMINLLSSVGGE 289
           ++FD + E   +SW+  +          E   LFK +R  N  + +  T + +LS     
Sbjct: 320 RIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHG 379

Query: 290 RILRAGKQI--QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WN 346
           ++   G +I       K G    +     ++ + G+ G+V +A      + F  + + W 
Sbjct: 380 QLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWG 439

Query: 347 SMIAGYSENGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           S++     +      + +   +LE        + ++ N Y  A   E + N + L Q   
Sbjct: 440 SLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKA 499

Query: 399 VHSHIIKSGFLLD 411
           V     +S   LD
Sbjct: 500 VTKEPGRSWVELD 512



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 62/116 (53%)

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           REV    +  +L  C +   + +G+ +H   +K  Y   +++ + +I +Y KC  + DA+
Sbjct: 58  REVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAR 117

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             F ++ + ++  W AM+  Y+Q G   E  NLF +M +   +P+  T+  +LTSC
Sbjct: 118 GMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC 173


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 261/459 (56%), Gaps = 1/459 (0%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+ GK +        F   + I N+L+ MY +CG +  AR +FD +  +D VSW SMI G
Sbjct: 90  LKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITG 149

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++N   + AL +F  ML     PN +T++S+++      S     Q+H+   K G   +
Sbjct: 150 YAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSN 209

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y +C  L E+  V  ++  KN V  NAL +         EAL L+  +  
Sbjct: 210 VFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQR 269

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
                   T+S +L +C++M  LEQGK +H   +K+      +V + ++ MY K G+I D
Sbjct: 270 EGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRD 329

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A++ F K+ +  +   N+M++GYAQHG   E +  F++M +FG++P++IT+L+VLT+C H
Sbjct: 330 AEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSH 389

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           A L+ E + Y   M   + + P++ HYA IVDLLGR GLL+ AK  I++MPI P   IW 
Sbjct: 390 ARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWG 448

Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
           +LL A  ++ N ++G  A  ++ EL P    T+ LL+N+YASAG W DV K+RK MK+  
Sbjct: 449 ALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSG 508

Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           + KEP  SW+ V    H F A D +H Q ++I+K   KL
Sbjct: 509 VKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKL 547



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 195/396 (49%), Gaps = 15/396 (3%)

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           S   L + D +    L PD   +++L+K C   G L+E ++VH   L   F   + + + 
Sbjct: 55  SKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNS 114

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YA+ G +  A   F +    D V++T+M+ GY  N     +  +F  M S G E N
Sbjct: 115 LLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174

Query: 179 EFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           EF+L++++      AS++   G QIH    K G  S V   + ++++++Y RCG   +A+
Sbjct: 175 EFTLSSLVKCCGYMASYNC--GRQIHACCWKYGCHSNV--FVGSSLVDMYARCGYLGEAM 230

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD++   + VSW+  IA      +G EA  LF  ++   ++  E+T   LLSS     
Sbjct: 231 LVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMG 290

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK + A   K     V  +GN L+ MY K G + DA  +FD L+  D VS NSM+ 
Sbjct: 291 CLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLI 350

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+++G   +A   F  M+ F + PN  T  S+L A S+++ L +       + K     
Sbjct: 351 GYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEP 410

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
             S  + ++   G+   L+++K  + E+  +  V I
Sbjct: 411 KVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAI 446



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +KEG+ +H   +   F   +   + N+++ +Y RCG    A ++FDE+   D+VSW+  I
Sbjct: 90  LKEGKLVHFHVLNSNFKHDLV--IQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMI 147

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                     +A  LF  +  +  + NE+T+ +L+   G       G+QI A C+K G  
Sbjct: 148 TGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCH 207

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +G++L+ MY +CG + +A  +FD L  K+ VSWN++IAGY+  G   +AL +F  M
Sbjct: 208 SNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRM 267

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
                 P  +T +++L + S+   L+Q   +H+H++KS   L   + + L+  Y K  ++
Sbjct: 268 QREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSI 327

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++++V  ++ K + V  N++           EA + +  +     E N  TF  VL AC
Sbjct: 328 RDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTAC 387

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGW 547
           +    L++GK    L  K   +  +   + ++D+  + G ++ AK    ++    ++A W
Sbjct: 388 SHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIW 447

Query: 548 NAMMMGYAQH 557
            A++     H
Sbjct: 448 GALLGASKMH 457



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 179/359 (49%), Gaps = 13/359 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + +L  N  H D ++  +L+  + +      A R   +  +RD++++ ++I+G A+  ++
Sbjct: 98  FHVLNSNFKH-DLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRA 156

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGF 119
             AL LF R+   G  P+ FT SSLVK CG +        +H  C K G  S V++ S  
Sbjct: 157 SDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSL 216

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ YA+ G +  A + F      + V++ A++ GY   GE +++  +FV M+  G    E
Sbjct: 217 VDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTE 276

Query: 180 FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           F+ +A+L +      +++G+ +H   +K      +  ++ N ++++Y + G   DA K+F
Sbjct: 277 FTYSALLSSCSSMGCLEQGKWLHAHLMKSS--QKLVGYVGNTLLHMYAKSGSIRDAEKVF 334

Query: 237 DEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
           D++ + DVVS +  +        G EA   F ++     + N+ T +++L++    R+L 
Sbjct: 335 DKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLD 394

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
            GK       K      VS    ++ + G+ G ++ A+S  + +  + +V+ W +++  
Sbjct: 395 EGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 2/229 (0%)

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           SL P+     ++L+  +    LK+   VH H++ S F  D  + + L+  Y +C +L  +
Sbjct: 69  SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           +R+  E+  ++ V   ++ +        ++AL L+  +     E N  T S ++K C  M
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188

Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAM 550
                G+ IH    K     ++FV S+++DMY +CG + +A   F K+ C++ ++ WNA+
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS-WNAL 247

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
           + GYA+ G   E   LF +M + G +P E TY A+L+SC   G + + +
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGK 296



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 10/278 (3%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E + + ++ +LK C  +  L++GK +H   L + +  D+ ++++++ MY +CG++E A+R
Sbjct: 71  EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR 130

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F ++    +  W +M+ GYAQ+    +   LF +M   G +P+E T  +++  C +   
Sbjct: 131 LFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMAS 190

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
               R   +C    +G    +   + +VD+  R G L  A +  D++    +   W +L+
Sbjct: 191 YNCGRQIHACCWK-YGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVS-WNALI 248

Query: 655 SACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
           +     G  +  L L    +    +P  E TY  L +  +S G   + GK       K  
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRP-TEFTYSALLSSCSSMGCL-EQGKWLHAHLMKSS 306

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            K  GY    VG    H YA   S   +++++ +L+K+
Sbjct: 307 QKLVGY----VGNTLLHMYAKSGSIRDAEKVFDKLVKV 340



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ L+K+   L   +  TL+  + K    R A +        D+++ N+++ G A+   
Sbjct: 298 LHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGL 357

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              A + FD +   G+ P+  TF S++ AC     L E +   G+  K     +V   + 
Sbjct: 358 GKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYAT 417

Query: 119 FIENYAKSGEIVSAE 133
            ++   ++G +  A+
Sbjct: 418 IVDLLGRAGLLDQAK 432


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 211/752 (28%), Positives = 382/752 (50%), Gaps = 29/752 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++ +G  ++  +   LI  + K      A        N ++ ++ ALI+  A+   
Sbjct: 48  VHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGH 107

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
               L LF +++  G +PDAF FS+++ AC   G+L E + +H   +  G  ++V + + 
Sbjct: 108 LREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNA 166

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LEL 177
            +  Y K G +  A+  F    + + V++ A++     NG    + +VF  M   G +  
Sbjct: 167 IVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRP 226

Query: 178 NEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+ +  +V+ A     D+  G+  H   ++ GF S +   + N+++N+Y +CG    A  
Sbjct: 227 NDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYL--FVGNSLVNMYGKCGSVDRARL 284

Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F++++  +VVSW+  I A A  G    AF L+K +   D + N  T + ++ S      
Sbjct: 285 VFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPED 341

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK--DSVSWNSMI 349
           L   +QI A     GF     +   L++MYGKCG V+ A SIF+ L  +  ++V+WN+MI
Sbjct: 342 LPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMI 401

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +G +++G   QAL+ F  M    + PN  T  + LEA S+   L +  Q+H+ I+    +
Sbjct: 402 SGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLEN-I 460

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            + ++ + +I  YGKC +L+E+    +++ +++ V  N + +         +ALE ++ +
Sbjct: 461 HEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQM 520

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR--YDQDIFVESAVIDMYCKCG 527
                  + +T+   + AC ++  L  GK IH +   A    +QD  V +A++ MY +CG
Sbjct: 521 DLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCG 580

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
           ++ DAK  F +    +L  W+ ++   AQHG  +E  +LF +M   G KPD +T+  ++ 
Sbjct: 581 SLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVA 640

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C   G+V++   Y   M + + +    +H+  +VDLLGR G LE A+  + + P    A
Sbjct: 641 ACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPCAL-A 699

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY----VLLSNLYASAGMWNDVGKL 703
           H    LL AC ++G+++ G+      LEL   N +++     +L+ LY +AG W D  ++
Sbjct: 700 HA--VLLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARV 757

Query: 704 RKEMKEKFLCKEP-GYSWIHVGGYTHHFYAGD 734
           RK ++ +   +EP G SWI V    H F   D
Sbjct: 758 RKAVESRNARREPGGRSWIEVKNRVHEFGEDD 789



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 176/622 (28%), Positives = 304/622 (48%), Gaps = 29/622 (4%)

Query: 75  QGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           + L+P    ++SL++ C    S    ++VH   L  G     Y+ +  I  YAK G +  
Sbjct: 22  ESLQP--ARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLED 79

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--- 188
           A   F    + +  ++TA++  Y   G   +   +F +M+  G + + F  + VL A   
Sbjct: 80  ALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSS 139

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +  + EG+ IH   V  G  + V   + NAI+NLY +CG+  +A  +F+ + E ++VSW+
Sbjct: 140 AGALNEGKAIHDCAVLAGMETQV---VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWN 196

Query: 249 ERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
             IAA        D ++ F L  DL     + N+ T ++++ +      L  GK      
Sbjct: 197 ALIAANAQNGHCKDAMQVFHLM-DLD-GSVRPNDATFVSVVDACSNLLDLPRGKSTHERI 254

Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            + GF   + +GN+L++MYGKCG V+ AR +F+ +  ++ VSW  MI  Y++ GF   A 
Sbjct: 255 IRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAF 314

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           D++  M      PN  T  +++++    + L +A Q+H+H++ SGF  D  +  CL+T Y
Sbjct: 315 DLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMY 371

Query: 423 GKCNALNESKRVLSEIDKK--NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
           GKC +++ +  +   + ++  NAV  NA+ S L       +ALE +  +       N  T
Sbjct: 372 GKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVT 431

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +   L+AC+++ DL +G+ +H   L      +  + +AVI+MY KCG++++A   F K+ 
Sbjct: 432 YLASLEACSSLNDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGSLDEAMDEFAKMP 490

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
              +  WN M+  YAQHG   +    F +M   G   D  TYL  + +C     +   +T
Sbjct: 491 ERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKT 550

Query: 601 YLSCMSDLHGLIPQLEHYA-CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
             S ++     + Q    A  +V +  R G L  AK ++       +   W +L++AC  
Sbjct: 551 IHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAK-SVFWRSHSRNLVTWSNLIAACAQ 609

Query: 660 YG--NIDLGLLAGSKLLELQPD 679
           +G  N  L L    +L   +PD
Sbjct: 610 HGRENEALDLFREMQLQGTKPD 631



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 3/185 (1%)

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
           S   +  + ++ +L+ C        GK +H   L +    + ++++ +I MY KCG +ED
Sbjct: 20  SSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLED 79

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A   F  +   ++  W A++  YA+ G   EV  LF KM   G KPD   +  VLT+C  
Sbjct: 80  ALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSS 139

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
           AG + E +    C + L G+  Q+   A IV+L G+ G +  AK   +++P   +   W 
Sbjct: 140 AGALNEGKAIHDC-AVLAGMETQVVGNA-IVNLYGKCGRVHEAKAVFERLP-ERNLVSWN 196

Query: 652 SLLSA 656
           +L++A
Sbjct: 197 ALIAA 201


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 192/649 (29%), Positives = 333/649 (51%), Gaps = 9/649 (1%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
            +L +  I+ Y K      A   F      +  +++ +V  YV N  + ++ EV+ EM  
Sbjct: 2   TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVR 61

Query: 173 LGLELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             + ++ ++L++VL A     DV+EG  +     ++GF   V   +  ++++L+ +CG  
Sbjct: 62  KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVV--VATSLIHLFAKCGCL 119

Query: 230 LDAVKMFDEI-TEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSS 285
            +A  +F  +    D++S +  I A     +   A   +  +R    + + +T   +L +
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 L  GK I     +      +S+ NALI+MY KCG + D++S+F  +  KD VSW
Sbjct: 180 CSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N+MIA Y+  G    A  +F  M      P+ YT +SIL A ++ K L+    +H  I  
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            GF  D +M + LI+ + +C +L  ++R    I+KK     N + +         +AL L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           Y+ +       +  TFS V+ +CA++  L +GK IH  +    +++D+ + +A+++MY K
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAK 419

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG++ DAK++F  I    +  W+AM+   AQHG   E   L + M+  G+  +E+T  +V
Sbjct: 420 CGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSV 479

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L +C H G + E   Y   +S   G+    E+    +DLLGR G L+ A+  +  MP   
Sbjct: 480 LHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKV 539

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
                 +LL  C ++G++  G     +++ L+P+N  +YVLL+N+YA+AG W+DV KLR+
Sbjct: 540 SFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRR 599

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            M++K + ++ G S I      + F  GD+S+ ++ EI  EL +LY  M
Sbjct: 600 YMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRM 648



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 239/494 (48%), Gaps = 12/494 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L+  +I  + K      A +     + R+  +++ L+    +      AL+++  + 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 74  YQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            + +  DA+T SS++ AC  L   +E  +V     +LGF   V + +  I  +AK G + 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 131 SAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA- 188
            AE  FR    + D ++ TAM+  YV +G+ D + + + +MRS GLE + F+  A+LGA 
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 189 -SFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
            S D + +G+ IH   ++      +   + NA++ +Y +CG   D+  +F  +   DVVS
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNIS--VRNALITMYAKCGSLKDSKSLFLTMDVKDVVS 238

Query: 247 WSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  IAA        +AF LF  +       + YT  ++L +    + L  G+ +     
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRIT 298

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
             GF    ++ N LISM+ +CG +  AR  F  +  K+  +WN+M+A Y++      AL 
Sbjct: 299 ARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALF 358

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           ++ +ML     P+ +T +S++++ ++  +L++   +H      GF  D  + + L+  Y 
Sbjct: 359 LYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYA 418

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC +L ++K+    I  K+ V  +A+ +         EALEL   +       N  T S 
Sbjct: 419 KCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASS 478

Query: 484 VLKACAAMTDLEQG 497
           VL AC+    L +G
Sbjct: 479 VLHACSHGGRLYEG 492



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 224/466 (48%), Gaps = 21/466 (4%)

Query: 10  GHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           G   D +++T+LI  F K     +    FR +     RDII+  A+I    R  ++  AL
Sbjct: 98  GFEKDVVVATSLIHLFAKCGCLEEAESVFRSM--GAMRDIISVTAMIGAYVRHGKNDLAL 155

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
             + ++R QGL PDAFT+++++ AC S   L + + +H   L+      + + +  I  Y
Sbjct: 156 DTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMY 215

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
           AK G +  ++  F      D V++ AM+  Y   G    +  +F  M +LG   + ++ +
Sbjct: 216 AKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFS 275

Query: 184 AVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++LGA    K   +G  +H      GF       + N +++++ RCG    A + F  I 
Sbjct: 276 SILGACASPKRLEDGRMLHVRITARGFDRDFA--MQNNLISMFTRCGSLESARRYFYSIE 333

Query: 241 EPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           + ++ +W+  +AA      G +A  L+K++    F  + +T  +++ S      LR GK 
Sbjct: 334 KKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKF 393

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I       GF + V +G AL++MY KCG + DA+  FD +  KD VSW++MIA  +++G 
Sbjct: 394 IHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGH 453

Query: 358 FNQALDMFCHMLEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMI 415
             +AL++  H++    I  N  T +S+L A S+   L + +     + +  G   D+   
Sbjct: 454 AEEALEL-SHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 512

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
              I   G+   L E++ VL  +  K  V   AL ++L     H +
Sbjct: 513 VGFIDLLGRAGWLKEAEHVLHTMPFK--VSFVALVTLLGGCKVHGD 556



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 134/260 (51%), Gaps = 17/260 (6%)

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + + +I  YGKC +  ++++V   I ++NA   + L    V  + + EALE+Y+ + 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                ++  T S VL AC  + D+E+G+ +   A +  +++D+ V +++I ++ KCG +E
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 531 DAKRAFRKI--CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +A+  FR +   RD ++   AM+  Y +HG      + + KM   G++PD  TY A+L +
Sbjct: 121 EAESVFRSMGAMRDIIS-VTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACI------VDLLGRVGLLEGAKMTIDQMP 642
           C     + + +        +H  I + +H+  I      + +  + G L+ +K     M 
Sbjct: 180 CSSPDFLLDGK-------HIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMD 232

Query: 643 IPPDAHIWQSLLSACTIYGN 662
           +  D   W ++++A T+YG+
Sbjct: 233 V-KDVVSWNAMIAAYTLYGH 251



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 35/378 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I+  ++++ H  +  +   LI+ + K    + +         +D++++NA+I+    + 
Sbjct: 191 HIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYG 250

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A  LF R+   G  PD +TFSS++ AC S   L++  ++H      GF     + +
Sbjct: 251 HDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQN 310

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---G 174
             I  + + G + SA   F      +  A+  M+  Y    +FDK K+     +++   G
Sbjct: 311 NLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAY---AQFDKGKDALFLYKNMLLEG 367

Query: 175 LELNEFSLTAV------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
              + F+ ++V      LGA   ++EG+ IH      GF   V   L  A++N+Y +CG 
Sbjct: 368 FTPDRFTFSSVVDSCASLGA---LREGKFIHECSTSCGFEKDVI--LGTALVNMYAKCGS 422

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
             DA K FD I+  DVVSWS  IAA+       EA  L   +       NE T  ++L +
Sbjct: 423 LADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHA 482

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGN------ALISMYGKCGQVNDARSIFDYLIF 339
                    G+  +   Y +G  +   I          I + G+ G + +A  +   + F
Sbjct: 483 CS-----HGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPF 537

Query: 340 KDS-VSWNSMIAGYSENG 356
           K S V+  +++ G   +G
Sbjct: 538 KVSFVALVTLLGGCKVHG 555


>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
 gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
          Length = 513

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 171/485 (35%), Positives = 267/485 (55%), Gaps = 4/485 (0%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           AF +++ +  + F  + +T   +L S      +  G+Q+     K+GF+  + + N+L+ 
Sbjct: 18  AFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVH 77

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
            Y  C +  DA  +FD ++ +D VSW  +I+GY   G F++A+ +F   L   + PN  T
Sbjct: 78  FYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLF---LRMDVEPNAAT 134

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
             S+L A      L     +H    KS F +   + + L+  Y KC  L  +K+V  E+ 
Sbjct: 135 FVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELA 194

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           +K+ V   ++ S LV  +C  EALEL++ +  S  E +G   + VL ACA +  L+ G+ 
Sbjct: 195 EKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRW 254

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H    +     DI + +A++DMY KCG IE + + F  +   ++  WNA++ G A HG 
Sbjct: 255 VHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGH 314

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS-DLHGLIPQLEHY 618
            ++V  LF +M + G++P+E+T+LA+LT+CCH GLV E R Y + M    + L P+LEHY
Sbjct: 315 AYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHY 374

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
            C+VDLL R  LL+ A      MP+ PD  I  +LLSAC   GN +L      + +EL  
Sbjct: 375 GCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDS 434

Query: 679 DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
            +   YVLLSN++A    W+DV ++R+ MKEK + K PG + I + G  H F  GD+ H 
Sbjct: 435 HDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELDGKAHEFIVGDTRHP 494

Query: 739 QSKEI 743
           Q K I
Sbjct: 495 QDKRI 499



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 187/360 (51%), Gaps = 14/360 (3%)

Query: 48  TYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVC 104
            +NAL+SG A   +   A  ++ R+   G  PD FTF +++K+C     + E   VHGV 
Sbjct: 1   PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60

Query: 105 LKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK 164
           +K+GF   +Y+ +  +  Y+       A   F + L  D V++T ++ GYV  G FD++ 
Sbjct: 61  IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAV 120

Query: 165 EVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
            +F+ M    +E N  +  +VL   G    +  G+ IHG   K  F  GV   ++NA+M+
Sbjct: 121 GLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAF--GVGLEVSNALMD 175

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACD-GVEAFGLFKDLRFNDFQINEYT 278
           +YV+CG    A ++FDE+ E D+VSW+  I+    C+   EA  LF+D++ +  + +   
Sbjct: 176 MYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGII 235

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
           + ++LS+      L  G+ +     +      + IG A++ MY KCG +  +  IF+ + 
Sbjct: 236 LTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMP 295

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            K+ ++WN+++ G + +G   + L++F  M+   + PN  T  +IL A  +   + +  Q
Sbjct: 296 HKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQ 355



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 21/399 (5%)

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSL---GLELNEFSLTAVLG--ASF-DVKEGEQIH 199
            + A+V GY      D+ K  F+  R +   G   + F+  AVL   A F  + EG Q+H
Sbjct: 1   PFNALVSGYAIG---DRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVH 57

Query: 200 GFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV 258
           G  +K+GF   VCN ++ N++++ Y  C +  DA ++FDE+   DVVSW+  I+      
Sbjct: 58  GVIIKMGF---VCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAG 114

Query: 259 ---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              EA GLF  LR  D + N  T +++L + G +  L  GK I    +K  F   + + N
Sbjct: 115 LFDEAVGLF--LRM-DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSN 171

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           AL+ MY KCG +  A+ +FD L  KD VSW S+I+G  +     +AL++F  M    + P
Sbjct: 172 ALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEP 231

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +G  + S+L A +   +L     VH HI +     D  + + ++  Y KC  +  S ++ 
Sbjct: 232 DGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIF 291

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           + +  KN +  NAL + L       + LEL+  +       N  TF  +L AC     + 
Sbjct: 292 NGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVN 351

Query: 496 QGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           +G+         +Y+    +E    ++D+ C+   +++A
Sbjct: 352 EGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEA 390



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 150/306 (49%), Gaps = 14/306 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ ++IK G   +  +  +L+  ++    F  A R   +   RD++++  +ISG  R  
Sbjct: 55  QVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAG 114

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
               A+ LF R+  +   P+A TF S++ ACG    L   + +HG+  K  F   + + +
Sbjct: 115 LFDEAVGLFLRMDVE---PNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSN 171

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K G +  A+  F +  + D V++T+++ G V      ++ E+F +M+S G+E 
Sbjct: 172 ALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEP 231

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +   LT+VL A   +     G  +H    +      +   +  A++++Y +CG    +++
Sbjct: 232 DGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDI--QIGTAMVDMYAKCGCIEMSMQ 289

Query: 235 MFDEITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ +   +V++W+     +A      +   LF+++     + NE T + +L++     +
Sbjct: 290 IFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGL 349

Query: 292 LRAGKQ 297
           +  G+Q
Sbjct: 350 VNEGRQ 355


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 190/646 (29%), Positives = 331/646 (51%), Gaps = 18/646 (2%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y KSG +  A   F D  +   VA+T M+  Y  +  F  + ++F EM   G + + 
Sbjct: 81  ISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDY 140

Query: 180 FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLN----NAIMNLYVRCGQKLDA 232
            +   +L    D+   KE  Q H   VK+G      +HLN    N +++ Y + G    A
Sbjct: 141 VTYITLLTGCNDLEVAKELYQAHAQIVKLG------HHLNHRVCNTLLDSYFKTGGLDSA 194

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F E+   D VS++  I   A +G+  EA  LF +++   F+ +++T   ++S+  G 
Sbjct: 195 RRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGL 254

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                G+QI  F  K  F+  V +GNA +  Y K   VN+ R +F+ +   D VS+N +I
Sbjct: 255 DDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVII 314

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
             Y+  G   +++D+F  +   +     +   ++L   ++S  L+   Q+H+ ++ S   
Sbjct: 315 TAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMAD 374

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            D  + + L+  Y KC    E+ R+   +  ++ V   A+ S  V    H   L+L+  +
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEM 434

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +    + +TF+ VLKA A +  +  GK +H   +++ +  +++   A++DMY  C +I
Sbjct: 435 RRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASI 493

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           +DA + F ++   ++  WNA++  YAQ+G        F +M   G +PD +++L +LT+C
Sbjct: 494 KDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTAC 553

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H  LV E   Y + MS ++ L P+ EHY  +VD L R G  + A+  + QMP  PD  +
Sbjct: 554 SHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIV 613

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           W S+L++C I+ N  L   A  +L  ++   + + YV +SN++A AG W+ V K++K M+
Sbjct: 614 WTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMR 673

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           ++ + K P YSW+ +    H F A D  H Q  EI +++  L E M
Sbjct: 674 DRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQM 719



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 286/629 (45%), Gaps = 68/629 (10%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           +IS + K  +   A R   DT  R ++ +  +I   ++  + G A KLF  +   G +PD
Sbjct: 80  IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139

Query: 81  AFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
             T+ +L+  C  L+   E    H   +KLG      + +  +++Y K+G + SA   F 
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKE 194
           +    D+V++  M+ GY  NG  +++ E+FVEM++LG + ++F+  AV+ AS    D   
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+QIHGF VK  F+  V   + NA ++ Y +     +  K+F+E+ E D VS++  I A 
Sbjct: 260 GQQIHGFVVKTSFIRNV--FVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAY 317

Query: 255 C---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
                  E+  LF++L+F  F    +    +LS       L+ G+Q+ A           
Sbjct: 318 AWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDF 377

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            + N+L+ MY KCG+  +A  IF  L  + +V W +MI+   + G     L +F  M   
Sbjct: 378 RVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRA 437

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC-LITTYGKCNALNE 430
           ++  +  T A +L+A +N  S+    Q+HS +I+SGF+  +    C L+  Y  C ++ +
Sbjct: 438 NVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM--NVYSGCALLDMYANCASIKD 495

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           + +   E+ ++N V  NAL S           L+ +  +  S  + +  +F  +L AC+ 
Sbjct: 496 AIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSH 555

Query: 491 MTDLEQG-------KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
              +E+G         ++ LA K  +       +A++D  C+ G  ++A++         
Sbjct: 556 CRLVEEGLKYFNDMSGVYNLAPKREH------YTAMVDALCRSGRFDEAEKL-------- 601

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVREART 600
                                     M +   +PDEI + +VL SC    +  L R+A  
Sbjct: 602 --------------------------MGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAG 635

Query: 601 YLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
            L  M  L    P    Y  + ++    G
Sbjct: 636 QLFNMKVLRDAAP----YVTMSNIFAEAG 660



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 224/475 (47%), Gaps = 8/475 (1%)

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQIN 275
           I++ YV+ G    A ++FD+  E  VV+W+  I A        +AF LF ++  +  Q +
Sbjct: 80  IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
             T I LL+      + +   Q  A   K+G      + N L+  Y K G ++ AR +F 
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +   DSVS+N MI GY+ NG   +A+++F  M      P+ +T A+++ A         
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             Q+H  ++K+ F+ +  + +  +  Y K + +NE +++ +E+ + + V  N + +   +
Sbjct: 260 GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAW 319

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                E+++L++ +  +  +     F  +L   A+  DL+ G+ +H   + +  D D  V
Sbjct: 320 VGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRV 379

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            ++++DMY KCG  E+A R F ++   S   W AM+    Q G +     LF +M +  V
Sbjct: 380 SNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANV 439

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK 635
             D+ T+  VL +  +   +   +   SC+  +      +     ++D+      ++ A 
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCV--IRSGFMNVYSGCALLDMYANCASIKDAI 497

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL--ELQPDNESTYVLLS 688
            T ++M    +   W +LLSA    G+    L +  +++    QPD+ S   +L+
Sbjct: 498 KTFEEMS-ERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILT 551



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 206/407 (50%), Gaps = 12/407 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++K GHHL+  +  TL+  + K      A R   +    D +++N +I+G A   
Sbjct: 161 QAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNG 220

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVS 117
            +  A++LF  ++  G +P  FTF++++ A   L +    + +HG  +K  F   V++ +
Sbjct: 221 LNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGN 280

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
            F++ Y+K   +      F +  +LD V+Y  ++  Y W G+  +S ++F E++    + 
Sbjct: 281 AFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDR 340

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
             F    +L    +S D++ G Q+H     V  ++     ++N+++++Y +CG+  +A +
Sbjct: 341 KNFPFPTMLSIAASSLDLQMGRQLH--AQVVVSMADPDFRVSNSLVDMYAKCGKFEEADR 398

Query: 235 MFDEITEPDVVSWSERIAAACD-GVEAFG--LFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  ++    V W+  I+A    G+   G  LF ++R  +   ++ T   +L +      
Sbjct: 399 IFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLAS 458

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQ+ +   + GFM V S G AL+ MY  C  + DA   F+ +  ++ V+WN++++ 
Sbjct: 459 ILLGKQLHSCVIRSGFMNVYS-GCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSA 517

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           Y++NG     L  F  M+     P+  +   IL A S+ + +++ ++
Sbjct: 518 YAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLK 564



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 175/410 (42%), Gaps = 56/410 (13%)

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-------------------- 337
           I A   K GF  + S  N +I    + GQ+  AR + D +                    
Sbjct: 30  IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89

Query: 338 ------IFKDS-----VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
                 IF D+     V+W +MI  YS++  F  A  +F  M      P+  T  ++L  
Sbjct: 90  LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++ +  K+  Q H+ I+K G  L+  + + L+ +Y K   L+ ++R+  E+   ++V  
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSF 209

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N + +       + EA+EL+  +     + +  TF+ V+ A   + D   G+ IH   +K
Sbjct: 210 NVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVK 269

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             + +++FV +A +D Y K   + + ++ F ++       +N ++  YA  G   E  +L
Sbjct: 270 TSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDL 329

Query: 567 FNKM--SKFGVKPDEI-TYLAVLTSCCHAGLVRE--ARTYLSCMSDLHGLIPQLEHYACI 621
           F ++  + F  K     T L++  S     + R+  A+  +S M+D     P       +
Sbjct: 330 FQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVS-MAD-----PDFRVSNSL 383

Query: 622 VDLLGRVGLLEGAKMTI----DQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           VD+  + G  E A         +  +P     W +++SA     N+  GL
Sbjct: 384 VDMYAKCGKFEEADRIFLRLSSRSTVP-----WTAMISA-----NVQRGL 423



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 22/278 (7%)

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           S F+ ++K  +    L Q + +    L    +++ F    +I  Y K G +  A+R F  
Sbjct: 44  SRFNFMIKDLSERGQLCQARQL----LDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDD 99

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
               ++  W  M+  Y++   + +   LF +M + G +PD +TY+ +LT C    + +E 
Sbjct: 100 TDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKE- 158

Query: 599 RTYLSCMSDLHGLIPQLEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
                  + +  L   L H  C  ++D   + G L+ A+    +M        W S+   
Sbjct: 159 --LYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMC------GWDSVSFN 210

Query: 657 CTIYGNIDLGLLAGSKLLELQPDN----ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
             I G  + GL   +  L ++  N     S +   + + AS G+  D     +++   F+
Sbjct: 211 VMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGL--DDTAFGQQI-HGFV 267

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            K      + VG     FY+     ++ ++++ E+ +L
Sbjct: 268 VKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPEL 305


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 179/594 (30%), Positives = 319/594 (53%), Gaps = 22/594 (3%)

Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN----NAIMNLYVRCGQKL 230
           L  + F+   ++ A+       Q+H   +++G L     H N     ++++ Y+R G+  
Sbjct: 65  LRPDSFTFPPLVRAAPGPASAAQLHACALRLGLL-----HPNVFASGSLVHAYLRFGRVA 119

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS--S 285
           +A ++FDE+ E DV +W+  ++  C      +A  L   +       +  T+ ++L    
Sbjct: 120 EAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCV 179

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
           V G+R L     +  +  K G    + + NALI +YGK G + +A  +F  +  +D V+W
Sbjct: 180 VLGDRAL--ALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTW 237

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NS+I+   + G    A+++F  M+E  + P+  T+ S+  AV+       A  VH ++ +
Sbjct: 238 NSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRR 297

Query: 406 SGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
            G+ + D +  + ++  Y K + ++ +++V   +  ++ V  N L +  +      EA+ 
Sbjct: 298 RGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIR 357

Query: 465 LYRTIWG--SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           +Y  +      + + G TF  VL A + +  L+QG  +H L++K   + D++V + +ID+
Sbjct: 358 IYNDMHNHEGLKPIQG-TFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDL 416

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y KCG + +A   F  + R S   WNA++ G   HG   +  +LF++M +  +KPD +T+
Sbjct: 417 YAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTF 476

Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +++L +C HAGLV + R++   M  ++G++P  +HY C+VD+LGR G L+ A   I  MP
Sbjct: 477 VSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMP 536

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           I PD+ +W +LL AC I+GN+++G +A   L EL P+N   YVL+SN+YA  G W+ V  
Sbjct: 537 IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDA 596

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS--HSQSKEIYKELIKLYEHM 754
           +R  ++ + L K PG+S + V G    FY+G  +  H Q +EI + L  L   M
Sbjct: 597 VRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKM 650



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 255/529 (48%), Gaps = 27/529 (5%)

Query: 77  LRPDAFTFSSLVKACGSLQENEIVHGVCLKLG-FSSRVYLVSGFIENYAKSGEIVSAEMC 135
           LRPD+FTF  LV+A         +H   L+LG     V+     +  Y + G +  A   
Sbjct: 65  LRPDSFTFPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F +  + D  A+ AM+ G   N     +  +   M   G+  +  +L++VL       D 
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDR 184

Query: 193 KEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
                +H + VK G LSG   VC    NA++++Y + G   +A  +F  +   D+V+W+ 
Sbjct: 185 ALALVMHVYAVKHG-LSGELFVC----NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNS 239

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG--GERILRAGKQIQAFCYK 304
            I+A   G     A  LF  +  +    +  T+++L S+V   G+ +    K +  +  +
Sbjct: 240 IISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDEL--GAKSVHCYVRR 297

Query: 305 VGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
            G+ +  +  GNA++ MY K  +++ A+ +FD L  +D VSWN++I GY +NG  N+A+ 
Sbjct: 298 RGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIR 357

Query: 364 MFCHMLEF-SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           ++  M     L P   T  S+L A S    L+Q M++H+  IK+G  LD  + +CLI  Y
Sbjct: 358 IYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLY 417

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  L E+  +   + +++    NA+ + L      A+AL L+  +     + +  TF 
Sbjct: 418 AKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI- 539
            +L AC+    ++QG++   L ++  Y      +  + ++DM  + G +++A    + + 
Sbjct: 478 SLLAACSHAGLVDQGRSFFDL-MQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMP 536

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            +   A W A++     HG   E+  + ++ + F + P+ + Y  ++++
Sbjct: 537 IKPDSAVWGALLGACRIHGNV-EMGKVASQ-NLFELDPENVGYYVLMSN 583



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 211/442 (47%), Gaps = 14/442 (3%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H +   S +L+  + +F     A+R   +   RD+  +NA++SGL R  ++  A+ L  R
Sbjct: 99  HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGR 158

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +  +G+  DA T SS++  C  L +     ++H   +K G S  +++ +  I+ Y K G 
Sbjct: 159 MVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGM 218

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL---ELNEFSLTAV 185
           +  A   F      D V + +++      G+   + E+F  M   G+    L   SL + 
Sbjct: 219 LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
           +    D    + +H +  + G+  G      NA++++Y +  +   A K+FD + + DVV
Sbjct: 279 VAQCGDELGAKSVHCYVRRRGWDVGDII-AGNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337

Query: 246 SWSERIAAAC-DGV--EAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAF 301
           SW+  I     +G+  EA  ++ D+  ++  +  + T +++L +      L+ G ++ A 
Sbjct: 338 SWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL 397

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K G    V +   LI +Y KCG++ +A  +F+++  + +  WN++IAG   +G   +A
Sbjct: 398 SIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKA 457

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS--GFLLDDSMISCLI 419
           L +F  M +  + P+  T  S+L A S++  + Q       ++++  G +      +C++
Sbjct: 458 LSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFD-LMQTVYGIVPIAKHYTCMV 516

Query: 420 TTYGKCNALNESKRVLSEIDKK 441
              G+   L+E+   +  +  K
Sbjct: 517 DMLGRAGQLDEAFEFIQSMPIK 538



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 169/357 (47%), Gaps = 15/357 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           +K+G   +  +   LI  + K      A         RD++T+N++IS   +  +   A+
Sbjct: 195 VKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAV 254

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFS-SRVYLVSGFIEN 122
           +LF  +   G+ PD  T  SL  A   CG     + VH    + G+    +   +  ++ 
Sbjct: 255 ELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDM 314

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLELNEFS 181
           YAK  +I +A+  F +  D D V++  ++ GY+ NG  +++  ++ +M +  GL+  + +
Sbjct: 315 YAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGT 374

Query: 182 LTAVLGA-SF--DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
             +VL A S+   +++G ++H   +K G    V  ++   +++LY +CG+ ++A+ +F+ 
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDV--YVTTCLIDLYAKCGKLVEAMFLFEH 432

Query: 239 ITEPDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           +       W+  IA       G +A  LF  ++  + + +  T ++LL++     ++  G
Sbjct: 433 MPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQG 492

Query: 296 KQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIA 350
           +        V G + +      ++ M G+ GQ+++A      +  K DS  W +++ 
Sbjct: 493 RSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLG 549



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           ++++L IK G +LD  ++T LI  + K      A  FLF+    R    +NA+I+GL   
Sbjct: 393 RMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAM-FLFEHMPRRSTGPWNAIIAGLGVH 451

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
                AL LF +++ + ++PD  TF SL+ AC
Sbjct: 452 GHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 207/658 (31%), Positives = 333/658 (50%), Gaps = 75/658 (11%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y + G+  SA   F        V Y AM+ GY+ N +FD +++VF +M    L    
Sbjct: 67  ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDL---- 122

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
                    S++V               LSG            YV+ G    A  +F+++
Sbjct: 123 --------ISWNV--------------MLSG------------YVKNGNLSAARALFNQM 148

Query: 240 TEPDVVSWSERIAAACDGVEAFGLFKDLR--FNDFQI-NEYTMINLLSS-VGGERILRAG 295
            E DVVSW+    A   G    G  ++ R  F+   + NE +   LLS+ V   RI  A 
Sbjct: 149 PEKDVVSWN----AMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDAR 204

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           +    F  K+ + E+VS  N L+  Y +  +++DARS+FD +  +D +SWN MI GY++N
Sbjct: 205 R---LFDSKMDW-EIVSW-NCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259

Query: 356 GFFNQALDMFCHM-----LEFSLIPNGYTMASIL-EAVSNSKSLKQAMQVHSHIIKSGFL 409
           G  ++A  +F  +       ++ + +G+    +L EA    + + +  +V  + + +G++
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYV 319

Query: 410 ----------LDDSMIS-------CLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
                     L D M S        ++T Y +C  ++++K +  E+ +++ +   A+ S 
Sbjct: 320 QSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISG 379

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
              +    EAL L+  +      +N S  +  L +CA +  LE GK +H   +KA +   
Sbjct: 380 YAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG 439

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
               +A++ MY KCG+IE+A   F  I    +  WN M+ GYA+HG   E   LF  M K
Sbjct: 440 YIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-K 498

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             +KPD++T + VL++C H G V +   Y + M   +G+    +HY C++DLLGR G L+
Sbjct: 499 MTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLD 558

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A   +  MP  PDA  W +LL A  I+G+ +LG  A  K+ E++PDN   YVLLSNLYA
Sbjct: 559 EALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYA 618

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           ++G W +V ++R +M++K + K PGYSW+ +   TH F  GD SH +++ IY  L +L
Sbjct: 619 ASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEEL 676



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 209/452 (46%), Gaps = 46/452 (10%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D I    ++S + K  +   A         +D++++NA++SG A+      A K+FD++ 
Sbjct: 121 DLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM- 179

Query: 74  YQGLRPDAFTFSSLVKA---CGSLQEN----------EIVHGVCLKLGFSSRVYLVSG-- 118
              L  +  +++ L+ A    G +++           EIV   CL  G+  +  L     
Sbjct: 180 ---LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236

Query: 119 ---------------FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
                           I  YA++G +  A   F +    D  A+TAMV G+V NG  D++
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEA 296

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             +F EM     E NE S  A++       + +QI         +        N ++  Y
Sbjct: 297 TRIFEEMP----EKNEVSWNAMIAGYV---QSQQIEKARELFDQMPSRNTSSWNTMVTGY 349

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMI 280
            +CG    A  +FDE+ + D +SW+  I   A +    EA  LF  ++ +   +N   + 
Sbjct: 350 AQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALA 409

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
             LSS      L  GKQ+     K GF      GNAL++MYGKCG + +A  +F+ +  K
Sbjct: 410 CALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK 469

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D VSWN+MIAGY+ +GF  +AL +F  M + ++ P+  T+  +L A S++  + + M+  
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYF 528

Query: 401 SHIIKS-GFLLDDSMISCLITTYGKCNALNES 431
           + + ++ G   +    +C+I   G+   L+E+
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 138/620 (22%), Positives = 262/620 (42%), Gaps = 85/620 (13%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
           IS + +      A       + R  +TYNA+ISG     +   A K+F+++      PD 
Sbjct: 67  ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------PDR 120

Query: 82  FTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
              S  V                          ++SG+++N    G + +A   F    +
Sbjct: 121 DLISWNV--------------------------MLSGYVKN----GNLSAARALFNQMPE 150

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQI 198
            D V++ AM+ G+  NG  ++++++F +M    L  NE S   +L A      +++  ++
Sbjct: 151 KDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRL 206

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDG 257
               +    +S  C      +M  YVR  +  DA  +FD +   D +SW+  I   A +G
Sbjct: 207 FDSKMDWEIVSWNC------LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260

Query: 258 V--EAFGLFKDLRFNDF-----QINEYTMINLLSSVGGERILRAGKQIQAFCYK---VGF 307
           +  EA  LF++L   D       ++ +    +L      RI     +     +     G+
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDE--ATRIFEEMPEKNEVSWNAMIAGY 318

Query: 308 MEVVSI-----------------GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
           ++   I                  N +++ Y +CG ++ A+ +FD +  +D +SW +MI+
Sbjct: 319 VQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMIS 378

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY+++G   +AL +F  M     I N   +A  L + +   +L+   Q+H  ++K+GF  
Sbjct: 379 GYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQT 438

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
                + L+  YGKC ++ E+  V  +I +K+ V  N + +         EAL L+ ++ 
Sbjct: 439 GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK 498

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
            + +  +  T   VL AC+    +++G +  + +        +    + +ID+  + G +
Sbjct: 499 MTIKP-DDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRL 557

Query: 530 EDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++A    + +      A W A++     HG          K+  F ++PD      +L++
Sbjct: 558 DEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV--FEMEPDNSGMYVLLSN 615

Query: 589 CCHA-GLVREARTYLSCMSD 607
              A G  RE R   S M D
Sbjct: 616 LYAASGRWREVREMRSKMRD 635



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 163/347 (46%), Gaps = 18/347 (5%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D I    +I+ + +      A R   +   RD+  + A++SG  +      A ++F+ + 
Sbjct: 245 DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM- 303

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-VYLVSGFIENYAKSGEIVSA 132
                P+    S      G +Q  +I     L     SR     +  +  YA+ G I  A
Sbjct: 304 -----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQA 358

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
           ++ F +    D +++ AM+ GY  +G+ +++  +F++M+  G  LN  +L   L +  ++
Sbjct: 359 KILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEI 418

Query: 193 KE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
                G+Q+HG  VK GF +G      NA++ +Y +CG   +A  +F++ITE D+VSW+ 
Sbjct: 419 AALELGKQLHGRLVKAGFQTGYI--AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNT 476

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-V 305
            IA       G EA  LF+ ++    + ++ T++ +LS+      +  G +     Y+  
Sbjct: 477 MIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNY 535

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAG 351
           G          +I + G+ G++++A ++   + F  D+ +W +++  
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGA 582



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/354 (20%), Positives = 155/354 (43%), Gaps = 28/354 (7%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  IS Y + GQ   A S+F+ +  + +V++N+MI+GY  N  F+ A  +F  M +  LI
Sbjct: 64  NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLI 123

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
               +   +L     + +L  A  + + + +   +  ++M+S     + +   + E++++
Sbjct: 124 ----SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLS----GFAQNGFVEEARKI 175

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
             ++  KN +  N L S  V      +A  L+ +            + IV   C     +
Sbjct: 176 FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS---------KMDWEIVSWNCLMGGYV 226

Query: 495 EQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            + +     +L  R   +D    + +I  Y + G + +A+R F ++    +  W AM+ G
Sbjct: 227 RKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSG 286

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           + Q+G   E + +F +M     + +E+++ A++     +  + +AR     M   +    
Sbjct: 287 FVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN---- 338

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
               +  +V    + G ++ AK+  D+MP   D   W +++S     G  +  L
Sbjct: 339 -TSSWNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEAL 390



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  L+K G     I    L++ + K      AF    D   +DI+++N +I+G AR  
Sbjct: 426 QLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHG 485

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL LF+ ++   ++PD  T   ++ AC
Sbjct: 486 FGKEALALFESMKMT-IKPDDVTLVGVLSAC 515



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 14/157 (8%)

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D DI   +  I  Y + G  E A   F  + R S   +NAM+ GY  +  +     +F K
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116

Query: 570 MSKFGVKPDE--ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           M      PD   I++  +L+     G +  AR   + M +       +  +  ++    +
Sbjct: 117 M------PDRDLISWNVMLSGYVKNGNLSAARALFNQMPE-----KDVVSWNAMLSGFAQ 165

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
            G +E A+   DQM +  +   W  LLSA    G I+
Sbjct: 166 NGFVEEARKIFDQMLVKNEIS-WNGLLSAYVQNGRIE 201


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 313/605 (51%), Gaps = 19/605 (3%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNE------FSLTAVLGASFDVKEGEQIHGFGVKVGFLSG 210
            G   +  E    M  +G+ +N       F +   LGA   + +G+  H    ++  ++ 
Sbjct: 70  QGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGA---LSDGKLFHN---RLQRMAN 123

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDL 267
               ++N I+ +Y  C     A + FD+I + D+ SWS  I+A  +     EA  LF  L
Sbjct: 124 SNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLF--L 181

Query: 268 RFNDFQINEYTMI--NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           R  D  I   + I   L+ S     +L  GKQI +   ++GF   +SI   + +MY KCG
Sbjct: 182 RMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCG 241

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            ++ A    + +  K++V+   ++ GY++      AL +F  M+   +  +G+  + IL+
Sbjct: 242 WLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILK 301

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A +    L    Q+HS+ IK G   + S+ + L+  Y KC     +++    I + N   
Sbjct: 302 ACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFS 361

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            +AL +    +     ALE+++ I      +N   ++ + +AC+A++DL  G  IH  A+
Sbjct: 362 WSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAI 421

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K      +  ESA+I MY KCG ++ A +AF  I +     W A++  +A HG   E   
Sbjct: 422 KKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALR 481

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF +M   GV+P+ +T++ +L +C H+GLV+E +  L  MSD +G+ P ++HY C++D+ 
Sbjct: 482 LFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVY 541

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
            R GLL+ A   I  +P  PD   W+SLL  C  + N+++G++A   +  L P + +TYV
Sbjct: 542 SRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYV 601

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           ++ NLYA AG W++  + RK M E+ L KE   SWI V G  H F  GD  H Q+++IY 
Sbjct: 602 IMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYS 661

Query: 746 ELIKL 750
           +L +L
Sbjct: 662 KLKEL 666



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 202/429 (47%), Gaps = 34/429 (7%)

Query: 31  FRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
           F  A RF     ++D+ +++ +IS      +   A++LF R+   G+ P++  FS+L+ +
Sbjct: 142 FTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMS 201

Query: 91  ---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
                 L   + +H   +++GF++ + + +     Y K G +  AE+        + VA 
Sbjct: 202 FTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVAC 261

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVK 204
           T ++ GY        +  +F +M S G+EL+ F  + +L A     D+  G+QIH + +K
Sbjct: 262 TGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK 321

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AF 261
           +G  S V   +   +++ YV+C +   A + F+ I EP+  SWS  IA  C   +   A 
Sbjct: 322 LGLESEVS--VGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRAL 379

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            +FK +R     +N +   N+  +      L  G QI A   K G +  +S  +A+ISMY
Sbjct: 380 EVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMY 439

Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            KCGQV+ A   F  +   D+V+W ++I  ++ +G   +AL +F  M    + PN  T  
Sbjct: 440 SKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFI 499

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM------------ISCLITTYGKCNALN 429
            +L A S           HS ++K G  + DSM             +C+I  Y +   L 
Sbjct: 500 GLLNACS-----------HSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQ 548

Query: 430 ESKRVLSEI 438
           E+  V+  +
Sbjct: 549 EALEVIRSL 557



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 183/365 (50%), Gaps = 19/365 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S LI+ G   +  + T + + + K      A         ++ +    L+ G  +  
Sbjct: 213 QIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAA 272

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  AL LF ++  +G+  D F FS ++KAC   G L   + +H  C+KLG  S V + +
Sbjct: 273 RNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGT 332

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K     +A   F    + ++ +++A++ GY  +G+FD++ EVF  +RS G+ L
Sbjct: 333 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLL 392

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVK---VGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           N F  T +  A   V +   G QIH   +K   V +LSG      +A++++Y +CGQ   
Sbjct: 393 NSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG-----ESAMISMYSKCGQVDY 447

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A + F  I +PD V+W+  I A        EA  LFK+++ +  + N  T I LL++   
Sbjct: 448 AHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSH 507

Query: 289 ERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             +++ GK+I  +   + G    +   N +I +Y + G + +A  +   L F+ D +SW 
Sbjct: 508 SGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWK 567

Query: 347 SMIAG 351
           S++ G
Sbjct: 568 SLLGG 572


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/679 (28%), Positives = 352/679 (51%), Gaps = 14/679 (2%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C S      +H  CLK+G +   ++V+     YA+   +  A   F +        
Sbjct: 10  LLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGL---ELNEFSLTAVLGASFDVKE---GEQIHG 200
           + A++  Y   G++ ++  +F +M +  +     + ++++  L +   +++   G+ IHG
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG 129

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE 259
           F +K    S +   + +A++ LY +CGQ  DAVK+F E  +PDVV W+  I     +G  
Sbjct: 130 F-LKKKIDSDM--FVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSP 186

Query: 260 AFGLF---KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
              L    + +       +  T+++  S+         G+ +  F  + GF   + + N+
Sbjct: 187 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 246

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           ++++YGK G +  A ++F  + +KD +SW+SM+A Y++NG    AL++F  M++  +  N
Sbjct: 247 ILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 306

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T+ S L A ++S +L++  Q+H   +  GF LD ++ + L+  Y KC +   +  + +
Sbjct: 307 RVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFN 366

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            + KK+ V    L S         ++L ++  +  +    +      +L A + +  ++Q
Sbjct: 367 RMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQ 426

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
              +H    K+ +D + F+ +++I++Y KC +I++A + F+ +    +  W++++  Y  
Sbjct: 427 ALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGF 486

Query: 557 HGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           HG   E   L ++MS    VKP+++T++++L++C HAGL+ E       M + + L+P +
Sbjct: 487 HGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNI 546

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY  +VDLLGR+G L+ A   I+ MP+    H+W +LL AC I+ NI +G LA   L  
Sbjct: 547 EHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFL 606

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           L P++   Y LLSN+Y     W+D  KLR  +KE  L K  G S + +    H F A D 
Sbjct: 607 LDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDR 666

Query: 736 SHSQSKEIYKELIKLYEHM 754
            H +S +IY+ L KL   M
Sbjct: 667 FHGESDQIYEMLRKLDARM 685



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 271/548 (49%), Gaps = 20/548 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S  +K G  LD  + T L   + ++A    A +   +T  + +  +NAL+       
Sbjct: 22  QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 61  QSGPALKLFDRLRYQGL---RPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
           +    L LF ++    +   RPD +T S  +K+C  LQ+ E+   +HG  LK    S ++
Sbjct: 82  KWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMF 140

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  IE Y+K G++  A   F +    D V +T+++ GY  NG  + +   F  M  L 
Sbjct: 141 VGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 200

Query: 175 LELNEFSLTAVLGASF-----DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            +++   +T V  AS      D   G  +HGF  + GF + +C  L N+I+NLY + G  
Sbjct: 201 -QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLC--LANSILNLYGKTGSI 257

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD-GVE--AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +F E+   D++SWS  +A   D G E  A  LF ++     ++N  T+I+ L + 
Sbjct: 258 RIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRAC 317

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GKQI       GF   +++  AL+ MY KC    +A  +F+ +  KD VSW 
Sbjct: 318 ASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWA 377

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            + +GY+E G  +++L +FC+ML     P+   +  IL A S    ++QA+ +H+ + KS
Sbjct: 378 VLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKS 437

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  ++ + + LI  Y KC++++ + +V   +   + V  +++ +   +     EAL+L 
Sbjct: 438 GFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLS 497

Query: 467 RTIWG-SCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYC 524
             +   S  + N  TF  +L AC+    +E+G K  H +  + +   +I     ++D+  
Sbjct: 498 HQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLG 557

Query: 525 KCGTIEDA 532
           + G ++ A
Sbjct: 558 RMGELDKA 565


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 219/760 (28%), Positives = 364/760 (47%), Gaps = 85/760 (11%)

Query: 77  LRPDAFT--FSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           L P A T   +  +++CGS   L     +HG  + +G +S V+L +  +  Y   G +  
Sbjct: 14  LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73

Query: 132 AEMCFR-DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGLELNEFSLTAVLGA 188
           A    R D  + + + +  M+ GY   G    ++E+F  M  R +       S T+    
Sbjct: 74  ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAG 133

Query: 189 SF------DVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG-------------- 227
           S+        +E   Q+ G   K  F       +  A+++++VRCG              
Sbjct: 134 SWMSCGALGCRELAPQLLGLFWKFDFWGD--PDVETALVDMFVRCGYVDFASRLFSQIER 191

Query: 228 -------------QKL----DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDL 267
                         KL     A++ F+++ E DVVSW+  IAA        EA GL  ++
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
                +++  T  + L++      L  GKQ+ A   +        + +ALI +Y KCG  
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            +A+ +F+ L  ++SVSW  +I G  +   F++++++F  M    +  + + +A+++   
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK------ 441
            N   L    Q+HS  +KSG      + + LI+ Y KC  L  ++ V S + ++      
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431

Query: 442 -------------------------NAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
                                    NA+  NA+    +      + L++Y  +  S ++V
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAML-SQKDV 490

Query: 477 NGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
                T+  + + CA +   + G  I    +KA    ++ V +A I MY KCG I +A++
Sbjct: 491 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 550

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  +    +  WNAM+ GY+QHG   + +  F+ M   G KPD I+Y+AVL+ C H+GL
Sbjct: 551 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 610

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V+E + Y   M+ +HG+ P LEH++C+VDLLGR G L  AK  ID+MP+ P A +W +LL
Sbjct: 611 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 670

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           SAC I+GN +L  LA   + EL   +  +Y+LL+ +Y+ AG  +D  ++RK M++K + K
Sbjct: 671 SACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKK 730

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            PGYSW+ V    H F A D SH Q   I  ++ +L E +
Sbjct: 731 NPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKI 770



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 218/474 (45%), Gaps = 52/474 (10%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            ++++ + K      A  +  D   RD++++N +I+ L++  +   AL L   +  +G+R
Sbjct: 198 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 257

Query: 79  PDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D+ T++S + AC    SL   + +H   ++       Y+ S  IE YAK G    A+  
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317

Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DV 192
           F    D ++V++T ++ G +    F KS E+F +MR+  + +++F+L  ++   F   D+
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
             G Q+H   +K G    +   ++N++++LY +CG   +A  +F  ++E D+VSW+  I 
Sbjct: 378 CLGRQLHSLCLKSGHNRAIV--VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 435

Query: 253 AACD--------------------------------GVEAFGL---FKDLRFNDFQINEY 277
           A                                   G E  GL      L   D   +  
Sbjct: 436 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 495

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T + L          + G QI     K G +  VS+ NA I+MY KCG++++A+ +FD L
Sbjct: 496 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 555

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA- 396
             KD VSWN+MI GYS++G   QA   F  ML     P+  +  ++L   S+S  +++  
Sbjct: 556 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 615

Query: 397 ----MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
               M    H I  G        SC++   G+   L E+K ++ ++  K    +
Sbjct: 616 LYFDMMTRVHGISPGL----EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEV 665



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 181/394 (45%), Gaps = 45/394 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I++   +DP +++ LI  + K   F+ A R     Q+R+ +++  LI G  ++ 
Sbjct: 281 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 340

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               +++LF+++R + +  D F  ++L+  C +  +      +H +CLK G +  + + +
Sbjct: 341 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 400

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL---- 173
             I  YAK G++ +AE  F    + D V++T+M+  Y   G   K++E F  M +     
Sbjct: 401 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAIT 460

Query: 174 -----------GLELNEFSLTAVLGASFDV--------------------KEGEQIHGFG 202
                      G E +   + + + +  DV                    K G+QI G  
Sbjct: 461 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 520

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVE 259
           VK G +  V   + NA + +Y +CG+  +A K+FD +   DVVSW+  I        G +
Sbjct: 521 VKAGLILNVS--VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 578

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNALI 318
           A   F D+     + +  + + +LS      +++ GK       +V G    +   + ++
Sbjct: 579 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 638

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
            + G+ G + +A+ + D +  K +   W ++++ 
Sbjct: 639 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/570 (31%), Positives = 303/570 (53%), Gaps = 17/570 (2%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           +HG  VK G  + +   +  +++N Y+RCG   DA  +FD++ E +VV+W+  I      
Sbjct: 100 LHGHMVKTGTSADM--FVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVN 157

Query: 258 ---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
              +EA  +F ++       + YT+  +L++         G Q+  +  K   + + SIG
Sbjct: 158 SQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIG 217

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ-ALDMFCHMLEFSL 373
           N+L  MY K G +  A   F  +  K+ ++W +MI+  +E+  + +  L +F  ML   +
Sbjct: 218 NSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGV 277

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           +PN +T+ S++        L    QV +   K G   +  + +  +  Y +    +E+ R
Sbjct: 278 LPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMR 337

Query: 434 VLSEIDKKNAVHINAL----ASVLVYAS--CHA-----EALELYRTIWGSCREVNGSTFS 482
              E+D  + +  NA+    A ++  A    HA     +AL+++R +  S  + +  TFS
Sbjct: 338 FFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFS 397

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            +L  C++M  LEQG+ IH   +K  +  D+ V SA+++MY KCG IEDA +AF ++   
Sbjct: 398 SILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIR 457

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           +L  W +M+ GY+QHG   E   LF  M   GV+P+EIT++ VL++C +AGL  +A  Y 
Sbjct: 458 TLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYF 517

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             M + + + P ++HY C+VD+  R+G L+ A   I +    P+  IW SL++ C  +GN
Sbjct: 518 DMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGN 577

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           ++L   A  +L+EL+P    TYVLL N+Y S   W+DV ++RK MK++ L      SWI 
Sbjct: 578 MELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWIT 637

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           +    + F A D +H  S E+Y+ L  L E
Sbjct: 638 IKDKVYFFKANDKTHELSDELYQLLENLLE 667



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 245/491 (49%), Gaps = 30/491 (6%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           GSL     +HG  +K G S+ +++ +  +  Y + G    A   F    + + V +TA++
Sbjct: 92  GSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALI 151

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFL 208
            GY  N +  ++ EVFVEM   G   + ++L A+L    AS +   G Q+HG+ +K   L
Sbjct: 152 TGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRAL 211

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE----AFGLF 264
           S     + N++  +Y + G    A++ F  + + +V++W+  I+A  +          LF
Sbjct: 212 S--ITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLF 269

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
            D+  +    NE+T+ +++S  G    L  GKQ+QAFC+K+G    + + N+ + +Y + 
Sbjct: 270 LDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRK 329

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSE-------------NGFFNQALDMFCHMLEF 371
           G+ ++A   F+ +     ++WN+MI+GY++              GF  QAL +F ++   
Sbjct: 330 GETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGF--QALKVFRNLKRS 387

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
           ++ P+ +T +SIL   S+  +L+Q  Q+H+  IK+GFL D  + S L+  Y KC  + ++
Sbjct: 388 AMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDA 447

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +   E+  +  V   ++ S         EA++L+  +  +    N  TF  VL AC+  
Sbjct: 448 TKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYA 507

Query: 492 TDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGW 547
              E  KA H    +K  Y  +  V+    ++DM+ + G ++DA    R+     + A W
Sbjct: 508 GLAE--KAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIW 565

Query: 548 NAMMMGYAQHG 558
           ++++ G   HG
Sbjct: 566 SSLVAGCRSHG 576



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 207/405 (51%), Gaps = 25/405 (6%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGP 64
           ++K G   D  ++T+L++ + +    + A R LFD    ++++T+ ALI+G     Q   
Sbjct: 104 MVKTGTSADMFVATSLVNAYMRCGASQDA-RSLFDQMPEKNVVTWTALITGYTVNSQLLE 162

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIE 121
           AL++F  +   G  P  +T  +++ AC +    ++   VHG  +K    S   + +    
Sbjct: 163 ALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCR 222

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK-SKEVFVEMRSLGLELNEF 180
            YAKSG + SA   FR   D + + +T M+     +  + +    +F++M   G+  NEF
Sbjct: 223 MYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEF 282

Query: 181 SLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +LT+V+   G   D+  G+Q+  F  K+G  + +   + N+ M LY+R G+  +A++ F+
Sbjct: 283 TLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNI--PVKNSTMYLYLRKGETDEAMRFFE 340

Query: 238 EITEPDVVSWSERIA--------------AACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
           E+ +  +++W+  I+              A   G +A  +F++L+ +  + + +T  ++L
Sbjct: 341 EMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSIL 400

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S       L  G+QI A   K GF+  V + +AL++MY KCG + DA   F  +  +  V
Sbjct: 401 SVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLV 460

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           +W SMI+GYS++G   +A+ +F  M    + PN  T   +L A S
Sbjct: 461 TWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACS 505



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 197/441 (44%), Gaps = 23/441 (5%)

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S+GG R L           K G    + +  +L++ Y +CG   DARS+FD +  K+ V+
Sbjct: 93  SLGGARAL------HGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVT 146

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W ++I GY+ N    +AL++F  MLE    P+ YT+ ++L A S S +     QVH + I
Sbjct: 147 WTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTI 206

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE-AL 463
           K   L   S+ + L   Y K  +L  + R    +  KN +    + S       + E  L
Sbjct: 207 KYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGL 266

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +       N  T + V+  C    DL  GK +     K     +I V+++ + +Y
Sbjct: 267 TLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLY 326

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ---------HGCYH--EVSNLFNKMSK 572
            + G  ++A R F ++   S+  WNAM+ GYAQ         H      +   +F  + +
Sbjct: 327 LRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKR 386

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
             +KPD  T+ ++L S C + +  E    +   +   G +  +   + +V++  + G +E
Sbjct: 387 SAMKPDLFTFSSIL-SVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIE 445

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNL 690
            A     +M I      W S++S  + +G     + L    +   ++P NE T+V + + 
Sbjct: 446 DATKAFVEMSIRTLV-TWTSMISGYSQHGRPQEAIQLFEDMRFAGVRP-NEITFVCVLSA 503

Query: 691 YASAGMWNDVGKLRKEMKEKF 711
            + AG+          MKE++
Sbjct: 504 CSYAGLAEKAEHYFDMMKEEY 524



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP---------- 64
           P+ ++T+  +  K  +   A RF  +  +  IIT+NA+ISG A+  ++            
Sbjct: 317 PVKNSTMYLYLRK-GETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGF 375

Query: 65  -ALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFI 120
            ALK+F  L+   ++PD FTFSS++  C S   L++ E +H   +K GF S V + S  +
Sbjct: 376 QALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALV 435

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K G I  A   F +      V +T+M+ GY  +G   ++ ++F +MR  G+  NE 
Sbjct: 436 NMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEI 495

Query: 181 SLTAVLGA-SFDVKEGEQIHGFG-VKVGF-LSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +   VL A S+     +  H F  +K  + +  + +H    +++++VR G+  DA     
Sbjct: 496 TFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHY-GCMVDMFVRLGRLDDAFAFIR 554

Query: 238 EIT-EPDVVSWSERIA 252
               EP+   WS  +A
Sbjct: 555 RTGFEPNEAIWSSLVA 570



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 13/281 (4%)

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA----LDMFCHMLEFSLI 374
           S +   G  +  R     +   D  +WN      ++NG   +A    LD+   M   +++
Sbjct: 14  SGFPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAM---AML 70

Query: 375 PNGYTMAS-----ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
             G T+ S     +L     + SL  A  +H H++K+G   D  + + L+  Y +C A  
Sbjct: 71  REGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQ 130

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           +++ +  ++ +KN V   AL +     S   EALE++  +  + R  +  T   +L AC+
Sbjct: 131 DARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACS 190

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
           A  + + G  +H   +K R      + +++  MY K G++E A RAFR +   ++  W  
Sbjct: 191 ASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTT 250

Query: 550 MMMGYAQHGCYHEVS-NLFNKMSKFGVKPDEITYLAVLTSC 589
           M+   A+   Y E+   LF  M   GV P+E T  +V++ C
Sbjct: 251 MISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLC 291



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 53/91 (58%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  IK G   D ++++ L++ + K      A +   +   R ++T+ ++ISG ++  
Sbjct: 414 QIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHG 473

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   A++LF+ +R+ G+RP+  TF  ++ AC
Sbjct: 474 RPQEAIQLFEDMRFAGVRPNEITFVCVLSAC 504


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 177/518 (34%), Positives = 276/518 (53%), Gaps = 35/518 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I +P+   W+  I   + +   V A   +  +     + N YT   LL S   
Sbjct: 85  ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAK 144

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV--------------------- 327
               + GKQI     K+G      +  +LI+MY + G++                     
Sbjct: 145 VGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTAL 204

Query: 328 ----------NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
                     +DAR +F+ +  +D+VSWN+MIAGY+++G F +AL  F  M   ++ PN 
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNE 264

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            TM ++L A + S SL+    V S I   G   +  +++ LI  Y KC  L++++ +   
Sbjct: 265 STMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEG 324

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           I +K+ +  N +     + + + EAL L+R +  S  E N  TF  +L ACA +  L+ G
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 498 KAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           K IH    K      +  + +++IDMY KCG IE AK+ F  +   SL  WNAM+ G A 
Sbjct: 385 KWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAM 444

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           HG  +    LF +M   G +PD+IT++ VL++C HAGLV   R   S M + + + P+L+
Sbjct: 445 HGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQ 504

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY C++DLLGR GL + A+  +  M + PD  IW SLL AC ++GN++LG  A   L EL
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           +P+N   YVLLSN+YA+AG W+DV ++R ++ +K + K
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 60/492 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI+S +IK G H      + LI     + F +   A       +  +   +N +I G + 
Sbjct: 50  QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
                 A+  + R+   G+ P+++TF  L+K+C   G+ QE + +HG  LKLG  S  ++
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFV 169

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV-------------------- 155
            +  I  YA++GE+  AE+ F      D V++TA++ GY                     
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDA 229

Query: 156 --WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGF 201
             WN         G F+++   F EM+   +  NE ++  VL A   S  ++ G  +  +
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
               G  S +   L NA++++Y +CG    A  +F+ I E D++SW+  I          
Sbjct: 290 IEDHGLGSNL--RLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIGNA 316
           EA  LF+ ++ ++ + N+ T +++L +      L  GK I A+  K  +G     S+  +
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTN-TSLWTS 406

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI MY KCG +  A+ +F  +  K   SWN+MI+G + +G  N AL++F  M +    P+
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-------CLITTYGKCNALN 429
             T   +L A S++  ++   Q  S ++      +D  IS       C+I   G+    +
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMV------EDYDISPKLQHYGCMIDLLGRAGLFD 520

Query: 430 ESKRVLSEIDKK 441
           E++ ++  ++ K
Sbjct: 521 EAEALMKNMEMK 532



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 236/518 (45%), Gaps = 50/518 (9%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS--GEIVSAEMCFRDCLDLD 143
           +L+  C S Q  + +H   +K G  +  + +S  IE  A S  G +  A + F      +
Sbjct: 37  TLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPN 96

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHG 200
              +  M+ G   +     + + +V M   G+E N ++   +L +   V   +EG+QIHG
Sbjct: 97  QFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQ----KL-------------------------- 230
             +K+G  S    H   +++N+Y + G+    +L                          
Sbjct: 157 HVLKLGLESDPFVH--TSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 231 -DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
            DA ++F+EI   D VSW+  IA         EA   F++++  +   NE TM+ +LS+ 
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G  ++++    G    + + NALI MY KCG ++ AR +F+ +  KD +SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            MI GYS    + +AL +F  M + ++ PN  T  SIL A +   +L     +H++I K 
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 407 GF-LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
              L + S+ + LI  Y KC  +  +K+V + +  K+    NA+ S L        ALEL
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVID 521
           +R +     E +  TF  VL AC+    +E G+   C +     D DI  +      +ID
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGR--QCFSSMVE-DYDISPKLQHYGCMID 511

Query: 522 MYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
           +  + G  ++A+   + +  +   A W +++     HG
Sbjct: 512 LLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 162/403 (40%), Gaps = 80/403 (19%)

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSG-----FLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           L  +S  KS +   Q+HS IIK+G     F L   +  C I+ +G    L+ +  +   I
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---LSYALLLFESI 92

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           ++ N    N +      +S    A++ Y  +     E N  TF  +LK+CA +   ++GK
Sbjct: 93  EQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGT------------------------------ 528
            IH   LK   + D FV +++I+MY + G                               
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212

Query: 529 -IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            ++DA+R F +I       WNAM+ GYAQ G + E    F +M +  V P+E T + VL+
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK------------ 635
           +C  +G +       S + D HGL   L     ++D+  + G L+ A+            
Sbjct: 273 ACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDII 331

Query: 636 ----------------------MTIDQMPIPPDAHIWQSLLSACTIYGNIDLG----LLA 669
                                   + Q  + P+   + S+L AC   G +DLG       
Sbjct: 332 SWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYI 391

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
             K L L   N S +  L ++YA  G      ++   MK K L
Sbjct: 392 DKKFLGLT--NTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL 432


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 190/676 (28%), Positives = 337/676 (49%), Gaps = 14/676 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
            + LV    SL++   +H   ++ G+   ++L +  +  YA+      AE+        +
Sbjct: 18  LARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRN 77

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGV 203
            +++ A++      G+F +S   F  M   G   +     +++ A   ++EGE +  F  
Sbjct: 78  ALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIVQEFAE 137

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---A 260
           K GF       +  A++ +Y RCG+   A   FD I E  VVSW+  I     G E   +
Sbjct: 138 KSGFDRSFV--VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQS 195

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGG--ERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
             +F+++       N  T+I + S+V G   +I   G  I +     G + V ++ N++I
Sbjct: 196 LRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSII 255

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +++G+ G +  A  IF+ +  +D  SWN+MI+ +++NG  + ALD++  M   ++ P+G 
Sbjct: 256 NLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRM---TIRPDGV 312

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  ++LEA      L++   +H  +   G+  D  + + L++ Y +C  L+ +  V + I
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 439 DKKNAVHINAL-ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
                + +NA+ A+   +       L   + +    R    +  +++     +      G
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAG 432

Query: 498 KAIHCLALKARYD---QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + +H    +   D    DI V +A+++MY KCG ++ A+  F    + +++ WNA+M GY
Sbjct: 433 RDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGY 492

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQHG  +    L  +M   G+ PD I++ A L++  HA  V +       +S  +GLIP 
Sbjct: 493 AQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPS 552

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EHY  +VDLLGR G LE A+  +  M I  DA  W +LL AC I+ + D  + A   ++
Sbjct: 553 VEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIV 612

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            + P + ++Y +LSN+Y++AG W++  ++R+ M E    KEPG SWI V    H F   D
Sbjct: 613 AIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKD 672

Query: 735 SSHSQSKEIYKELIKL 750
            SH ++ EIY+ L +L
Sbjct: 673 RSHPRTGEIYERLDEL 688



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 247/550 (44%), Gaps = 14/550 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  +I++G+     LS  L+  + +    R A   L     R+ +++NA+I   A+  
Sbjct: 33  KIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQAG 92

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               +L  F R+   G  PDA  F SL+KA  ++QE EIV     K GF     + +  I
Sbjct: 93  DFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIVQEFAEKSGFDRSFVVGTALI 152

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y + G +  A+  F    +   V++ A++  Y    E ++S  VF EM   G+  N  
Sbjct: 153 GMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAV 212

Query: 181 SL----TAVLGASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           ++    +AV G +  +   G  IH   +  G +S     + N+I+NL+ R G    A  +
Sbjct: 213 TIICIASAVAGIAAKITTCGNLIHSCSIDSGLIS--VTTVANSIINLFGRGGNITRANDI 270

Query: 236 FDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           F+++   DV SW+  I+A      + G          + +  T +N+L +      L  G
Sbjct: 271 FEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIRPDGVTFVNVLEACDCPDDLERG 330

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           + I       G+   + +  AL+SMY +CG+++ A  +F  +     ++ N++IA +++ 
Sbjct: 331 ESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQF 390

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSM 414
           G  + +L  F  ML+  + P+ +T+ ++L A + S +   A + +H  + +     D   
Sbjct: 391 GRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHD 450

Query: 415 I---SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
           I   + L+  Y KC  L+ ++ +     + N    NA+ +          A+ L   +  
Sbjct: 451 ILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQL 510

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
           +    +  +F+  L A +    +E G  I   A+   Y     VE   AV+D+  + G +
Sbjct: 511 AGISPDPISFTAALSASSHARQVEDGARIF-YAISRDYGLIPSVEHYGAVVDLLGRAGWL 569

Query: 530 EDAKRAFRKI 539
           E+A+   R +
Sbjct: 570 EEAEGFLRSM 579


>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
 gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 183/535 (34%), Positives = 290/535 (54%), Gaps = 14/535 (2%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ-KLDAVKMFDEITEPDVVSWSERIA 252
            G Q H   VK G  +     + N++++LY + G   L   ++FD +   DVVSW+  I 
Sbjct: 78  RGRQFHAHVVKSGLETD--RFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMIT 135

Query: 253 AAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                   G+ A  LF D+  +  + N +T+  ++ +      L  GK       + GF 
Sbjct: 136 GYVREGKSGI-AIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFD 194

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF-CH 367
               I ++LI MYG+    +DAR +FD L+  D V W ++I+ ++ N  + +AL  F   
Sbjct: 195 SNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLK 254

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
                L P+ YT  S+L A  N   L+Q  ++H+ +I  GF  +    S L+  YGKC A
Sbjct: 255 HRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGA 314

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           + +S+R+   +  +N+V  +AL +V  +   + +A+ L+R +    +EV+  +F  V++A
Sbjct: 315 VEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREM----KEVDLYSFGTVIRA 370

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA +  +  GK IHC  ++    +D+ VESA++D+Y KCG I  A R F ++   +L  W
Sbjct: 371 CAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITW 430

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           N+M+ G+AQ+G       +F  M K G+KPD I+++ +L +C H GLV +AR Y   M+ 
Sbjct: 431 NSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTG 490

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY-GNIDLG 666
            +G+ P +EHY C+VDLLGR GLLE A+  I+      D+ +W  LL ACT    N    
Sbjct: 491 KYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATA 550

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
                KL+EL+P    +YV L+N+Y + G W+D  K+R+ MK + L K PG SW+
Sbjct: 551 ERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 239/457 (52%), Gaps = 24/457 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFAD----FRRAFRFLFDTQNRDIITYNALISGL 56
           Q ++ ++K+G   D  +  +L+S + K        RR F  LF    +D++++ ++I+G 
Sbjct: 81  QFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLF---VKDVVSWASMITGY 137

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
            R  +SG A++LF  +   G+ P+ FT S+++KAC   G+L   +  HGV ++ GF S  
Sbjct: 138 VREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNP 197

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRS 172
            ++S  I+ Y ++     A   F + L+ D V +T ++  +  N  ++++   F ++ R+
Sbjct: 198 VILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRA 257

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             L  + ++  +VL A  +   +++GE+IH   +  GF   V     ++++++Y +CG  
Sbjct: 258 HRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTE--SSLVDMYGKCGAV 315

Query: 230 LDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             + ++FD ++  + VSWS  +A  C   D  +A  LF++++    +++ Y+   ++ + 
Sbjct: 316 EKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK----EVDLYSFGTVIRAC 371

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
            G   +  GK+I     + G    V + +AL+ +Y KCG +N A  +FD +  ++ ++WN
Sbjct: 372 AGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWN 431

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-K 405
           SMI G+++NG    A+ +F  M++  + P+  +   +L A S++  + QA      +  K
Sbjct: 432 SMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGK 491

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
            G        +C++   G+   L E++ ++   + +N
Sbjct: 492 YGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRN 528



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 5/312 (1%)

Query: 347 SMIAGYSENGFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           S I  + ++G  N AL +   + L  S I      AS+L+      S  +  Q H+H++K
Sbjct: 29  SQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVK 88

Query: 406 SGFLLDDSMISCLITTYGKCNALN-ESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           SG   D  + + L++ Y K  + +  ++RV   +  K+ V   ++ +  V       A+E
Sbjct: 89  SGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIE 148

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           L+  +  S  E NG T S V+KAC+ + +L  GK  H + ++  +D +  + S++IDMY 
Sbjct: 149 LFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYG 208

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN-KMSKFGVKPDEITYL 583
           +     DA++ F ++       W  ++  + ++  Y E    F  K     + PD  T+ 
Sbjct: 209 RNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFG 268

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           +VLT+C + G +R+    +      +G    +   + +VD+ G+ G +E ++   D+M  
Sbjct: 269 SVLTACGNLGRLRQGEE-IHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMS- 326

Query: 644 PPDAHIWQSLLS 655
             ++  W +LL+
Sbjct: 327 NRNSVSWSALLA 338


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 176/541 (32%), Positives = 276/541 (51%), Gaps = 5/541 (0%)

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQIN 275
           +++ Y + G      K FDE+   D+VSW+  IAA     D    +  F+ +        
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           E  +   LS+    R +  G+ IQ      G  E   +  AL+SMYGK G   DA S+F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            +  +D V+W++M+A Y+ NG   +AL +F  M    + PN  T+ S L+A ++   L+ 
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
              +H  +   G      + + L+  YGKC  +  +     +I +KN V  +A+++    
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH--CLALKARYDQDI 513
              + +A+ +   +       N +TF  VL ACAA+  L+QG+ IH     L    + D+
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
           +V +A+++MY KCG +  A   F KI    L  WN+++   AQHG   +   LF +M   
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
           G++P  IT+ +VL +C HAG++ + R +       HG+ P+ EH+ C+VDLLGR G +  
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           ++  +  MP  P    W + L AC  Y N+D  + A   L +L P   + YVLLSN+YA 
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAK 480

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
           AG W+DV ++R+ M+     KE G SWI V    H F +GD  H +  EI+ EL +L + 
Sbjct: 481 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 540

Query: 754 M 754
           M
Sbjct: 541 M 541



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 180/421 (42%), Gaps = 22/421 (5%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           ++  G   + I+ T L+S + K      A        +RD++ ++A+++  AR      A
Sbjct: 87  ILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREA 146

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           L LF ++   G+ P+  T  S + AC   G L+   ++H      G  S V + +  +  
Sbjct: 147 LGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNL 206

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K G I +A   F   ++ + VA++A+   Y  N     +  V   M   GL  N  + 
Sbjct: 207 YGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTF 266

Query: 183 TAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            +VL A   +   K+G +IH     +G       ++  A++N+Y +CG    A  MFD+I
Sbjct: 267 VSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKI 326

Query: 240 TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG- 295
              D+V W+  IA         +A  LF+ +R    Q    T  ++L +     +L  G 
Sbjct: 327 AHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGR 386

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSE 354
           K   +F    G          ++ + G+ G + D+  +  ++ F+   V+W + +     
Sbjct: 387 KHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRT 446

Query: 355 NGFFNQALDMFCHMLE--------FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
               ++A+    ++ +        + L+ N Y  A      S+   ++QAMQ+   + ++
Sbjct: 447 YRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAG---RWSDVARMRQAMQLFMTVKEA 503

Query: 407 G 407
           G
Sbjct: 504 G 504


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 167/475 (35%), Positives = 266/475 (56%), Gaps = 7/475 (1%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N++T  ++LS+     ++  G+Q+ +  +K GF   + +G AL+ MY KC  ++ A  +F
Sbjct: 9   NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 68

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSL 393
           D +  ++ VSWNSMI G+  N  +++A+ +F  +L E ++IPN  +++S+L A +N   L
Sbjct: 69  DQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGL 128

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
               QVH  ++K G +    +++ L+  Y KC   +E  ++   +  ++ V  N L    
Sbjct: 129 NFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGF 188

Query: 454 VYASCHAEALELYRTIWGSCRE---VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           V      EA   +   W   RE    + ++FS VL + A++  L QG AIH   +K  Y 
Sbjct: 189 VQNDKFEEACNYF---WVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYV 245

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           +++ +  ++I MY KCG++ DA + F  I   ++  W AM+  Y  HGC ++V  LF  M
Sbjct: 246 KNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHM 305

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
              G++P  +T++ VL++C H G V E   + + M  +H + P  EHYAC+VDLLGR G 
Sbjct: 306 LSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGW 365

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           L+ AK  I+ MP+ P   +W +LL AC  YGN+ +G  A  +L E++P N   YVLL+N+
Sbjct: 366 LDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANM 425

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
              +G   +  ++R+ M    + KEPG SWI V   T  F A D SHS S EIYK
Sbjct: 426 CTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 480



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 196/382 (51%), Gaps = 15/382 (3%)

Query: 72  LRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           +R  G  P+ FTFSS++ A  +   +   + +H +  K GF + +++ +  ++ YAK  +
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE-MRSLGLELNEFSLTAVLG 187
           + SA   F    + + V++ +M+ G+  N  +D++  VF + +R   +  NE S+++VL 
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 188 ASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           A  +   +  G Q+HG  VK G +     ++ N++M++Y +C    + VK+F  + + DV
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVP--LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDV 178

Query: 245 VSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
           V+W+  +          EA   F  +R      +E +   +L S      L  G  I   
Sbjct: 179 VTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQ 238

Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQA 361
             K+G+++ + I  +LI+MY KCG + DA  +F+ +   + +SW +MI+ Y  +G  NQ 
Sbjct: 239 IIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 298

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD--DSMISCLI 419
           +++F HML   + P+  T   +L A S++  +++ +  H + +K    ++      +C++
Sbjct: 299 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGL-AHFNSMKKIHDMNPGPEHYACMV 357

Query: 420 TTYGKCNALNESKRVLSEIDKK 441
              G+   L+E+KR +  +  K
Sbjct: 358 DLLGRAGWLDEAKRFIESMPMK 379



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 38/373 (10%)

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN +T +SIL A + +  +    Q+HS I K GF  +  + + L+  Y KC  ++ + RV
Sbjct: 8   PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKACAAMTD 493
             ++ ++N V  N++     + + +  A+ +++ +      + N  + S VL ACA M  
Sbjct: 68  FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 127

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  G+ +H + +K       +V ++++DMY KC   ++  + F+ +    +  WN ++MG
Sbjct: 128 LNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMG 187

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART---------YLSC 604
           + Q+  + E  N F  M + G+ PDE ++  VL S      + +            Y+  
Sbjct: 188 FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKN 247

Query: 605 MSDLHGLIPQLEHYACIVD------------------LLGRVGLLEGAKMTIDQMP---- 642
           M  L  LI        +VD                  ++    L   A   I+       
Sbjct: 248 MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLS 307

Query: 643 --IPPDAHIWQSLLSACTIYGNIDLGLL---AGSKLLELQPDNESTYVLLSNLYASAGMW 697
             I P    +  +LSAC+  G ++ GL    +  K+ ++ P  E  Y  + +L   AG  
Sbjct: 308 EGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEH-YACMVDLLGRAGWL 366

Query: 698 NDVGKLRKEMKEK 710
           ++  +  + M  K
Sbjct: 367 DEAKRFIESMPMK 379



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 7/193 (3%)

Query: 1   QIYSLLIKNGHHLDPI--LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q++ +++K G  L P+  +  +L+  + K   F    +      +RD++T+N L+ G  +
Sbjct: 133 QVHGVVVKFG--LVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ 190

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             +   A   F  +R +G+ PD  +FS+++ +  S   L +   +H   +KLG+   + +
Sbjct: 191 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 250

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +   I  YAK G +V A   F    D + +++TAM+  Y  +G  ++  E+F  M S G+
Sbjct: 251 LGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGI 310

Query: 176 ELNEFSLTAVLGA 188
           E +  +   VL A
Sbjct: 311 EPSHVTFVCVLSA 323


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 193/676 (28%), Positives = 335/676 (49%), Gaps = 14/676 (2%)

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
            + LV    SL +   +H   ++ G+   ++L +  +  YA+      AE+        +
Sbjct: 18  LARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRN 77

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGV 203
            V++ A++      G+F +S   F  M   G   +     +++ A   ++EGE +  F  
Sbjct: 78  AVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQEGEIVQDFAK 137

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---A 260
           K GF       +  A++ +Y RCG+   A   FD I E  VVSW+  I     G E   +
Sbjct: 138 KSGFDRSFV--VGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQS 195

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGG--ERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
             +F+++       N  T+I + S+V G   +I   G  I A     G + V ++ N++I
Sbjct: 196 LRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSII 255

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +++G+ G ++ A  IF+ +  +D  SWN+MIA +++NG   +ALD++  M   ++ P+G 
Sbjct: 256 NLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIRPDGV 312

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  ++LEA      L++   +H      G+  D  + + L++ Y +C  L+ +  V + I
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAI 372

Query: 439 DKKNAVHINAL-ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
                + +NA+ A+   +       L   + +    R    +  +++     +      G
Sbjct: 373 QHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAG 432

Query: 498 KAIHCLALKARYD---QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           + +H    +   D    DI V +A+++MY KCG ++ A+  F    + +++ WNA+M GY
Sbjct: 433 RDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGY 492

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQHG       L  +M   G+ PD I++ A L++  HA  V +       +S  +GLIP 
Sbjct: 493 AQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPS 552

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
           +EHY  +VDLLGR G LE A+  +  M I  DA  W +LL AC I+ + D  + A   ++
Sbjct: 553 VEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIV 612

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            + P + ++Y +LSN+Y++AG W++  ++R+ M E    KEPG SWI V    H F   D
Sbjct: 613 AIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKD 672

Query: 735 SSHSQSKEIYKELIKL 750
            SH ++ EIY+ L +L
Sbjct: 673 RSHPRTGEIYERLDEL 688



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 256/553 (46%), Gaps = 20/553 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+  +I++G+     LS  L+  + +    R A   L     R+ +++NA+I   A+  
Sbjct: 33  KIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQAG 92

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               +L  F R+   G  PDA  F SL+KA G++QE EIV     K GF     + +  I
Sbjct: 93  DFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQEGEIVQDFAKKSGFDRSFVVGTALI 152

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y + G +  A+  F    +   V++ A++  Y    E ++S  VF EM   G+  N  
Sbjct: 153 GMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAV 212

Query: 181 SL----TAVLGASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           ++    +AV G +  +   G  IH   +  G +S     + N+I+NL+ R G    A ++
Sbjct: 213 TIICIASAVAGIAAKITTCGNLIHACSIDSGLIS--VTTVANSIINLFGRGGNISRANEI 270

Query: 236 FDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F+++ + DV SW+  IAA A +G   EA  L+  +     + +  T +N+L +      L
Sbjct: 271 FEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRM---TIRPDGVTFVNVLEACDCPDDL 327

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+ I       G+   + +  AL+SMY +CG+++ A  +F  +     ++ N++IA +
Sbjct: 328 ERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAH 387

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLD 411
           ++ G  + +L  F  ML+  + P+ +T+ ++L A + S +   A + +H  + +     D
Sbjct: 388 AQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCD 447

Query: 412 DSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
              I   + L+  Y KC  L+ ++ +     + N    NA+ +          A+ L   
Sbjct: 448 PHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYE 507

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKC 526
           +  +    +  +F+  L A +    +E G  I   A+   Y     VE   AV+D+  + 
Sbjct: 508 MQLAGISPDPISFTAALSASSHARQVEDGARIF-YAISRDYGLIPSVEHYGAVVDLLGRA 566

Query: 527 GTIEDAKRAFRKI 539
           G +E+A+   R +
Sbjct: 567 GWLEEAEGFLRSM 579


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 196/648 (30%), Positives = 323/648 (49%), Gaps = 21/648 (3%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L+ AC +L     +H   L  G    +   +  +  YA  G++ SA     +    D   
Sbjct: 29  LLPACATLPSLRALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYT 88

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE--FSLTAVLGASF---DVKEGEQIHGF 201
           Y   +  +   G    +  +   MR    E ++    L+  L AS    D + G ++H  
Sbjct: 89  YRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCN 148

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GV 258
            VK G   G    + N ++++Y + G   +A K+FD I   +VVSW+  ++         
Sbjct: 149 AVKAG---GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAE 205

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           E   LF ++R      +EYTM ++L +      L  G+ +     K G +    I  A++
Sbjct: 206 EGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVL 265

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY KCG+V DAR +FD L F D V W +MI GY++NG    AL +F       ++PN  
Sbjct: 266 DMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSV 325

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+A++L A +  ++L     +H+  +K   + +D +++ L+  Y KC AL+E+  +   I
Sbjct: 326 TIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRI 385

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST---FSIV--LKACAAMTD 493
             K+ V  N+L +  V      EAL L+  +      V GS+    SIV  L AC  + D
Sbjct: 386 SNKDVVTWNSLIAGYVENDMGNEALMLFSQM-----RVQGSSPDAISIVNALSACVCLGD 440

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L  GK  H  A+K  +  +++V +A++++Y KC  +  A+R F ++   +   W AM+ G
Sbjct: 441 LLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGG 500

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y   G      +L NKM K  ++P+E+ + ++L++C H G+V   +     M+    + P
Sbjct: 501 YGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITP 560

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            ++HYAC+VD+L R G LE A   I +MP+P D  IW + L  C ++  ++ G  A +++
Sbjct: 561 SMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRM 620

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           + L PD    YVL+SNLY S G W+    +R+ M+E+ L K PG S +
Sbjct: 621 MVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSV 668



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 189/386 (48%), Gaps = 11/386 (2%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +   L+  + K  D   A +       R+++++ +++SG  +   +   L LF+ +R
Sbjct: 156 DGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMR 215

Query: 74  YQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            + + P  +T +S++ AC   GSL +   VHG  +K G     ++ +  ++ Y K GE+ 
Sbjct: 216 EERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVE 275

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F +   +D V +T M+ GY  NG    +  +F + + + +  N  ++  VL AS 
Sbjct: 276 DARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASA 335

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            ++    G  IH   VK+  +    + + NA++++Y +C    +A  +F  I+  DVV+W
Sbjct: 336 QLRNLSLGRLIHAMSVKLLVIEN--DVVMNALVDMYAKCKALSEANGIFGRISNKDVVTW 393

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  IA   +   G EA  LF  +R      +  +++N LS+      L  GK    +  K
Sbjct: 394 NSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVK 453

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
             F+  V +  AL+++Y KC  +  A+ +F  +  ++SV+W +MI GY   G    ++D+
Sbjct: 454 RAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDL 513

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNS 390
              ML+ ++ PN     SIL   S++
Sbjct: 514 LNKMLKDNIQPNEVVFTSILSTCSHT 539



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 142/304 (46%), Gaps = 11/304 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +IK+G   +P ++  ++  + K  +   A R   +    D++ +  +I G  +   
Sbjct: 245 VHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGS 304

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              AL LF   ++  + P++ T ++++ A   L+      ++H + +KL       +++ 
Sbjct: 305 PLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNA 364

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK   +  A   F    + D V + +++ GYV N   +++  +F +MR  G   +
Sbjct: 365 LVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPD 424

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             S+   L A     D+  G+  H + VK  FLS V  ++N A++NLY +C     A ++
Sbjct: 425 AISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNV--YVNTALLNLYNKCADLPSAQRV 482

Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F E++E + V+W   I       D   +  L   +  ++ Q NE    ++LS+     ++
Sbjct: 483 FSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMV 542

Query: 293 RAGK 296
             GK
Sbjct: 543 SVGK 546


>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
 gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 178/519 (34%), Positives = 279/519 (53%), Gaps = 6/519 (1%)

Query: 235 MFDEITEPDVVSWSERIAAACDGVEAFG----LFKDLRFNDFQINEYTMINLLSSVGGER 290
           +F+++T+P++ +++  +       + +     L+  L+    + N +T   L  + G  R
Sbjct: 83  VFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVR 142

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK      +K G      + ++LI+MY +CG++  AR +FD +  +D VSWNSMI+
Sbjct: 143 GLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMIS 202

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GYS+ GF  +A+ +F  M E    P+  T+ S+L A  +   L     V   +++    +
Sbjct: 203 GYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEV 262

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +  M S LI  YGKC  L  ++RV   +  K+ V  NA+ +         EA+ L+  + 
Sbjct: 263 NSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMR 322

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +    +  T   VL AC+ +  L+ GK +   A +     D++V SA+IDMY KCG+++
Sbjct: 323 EAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLD 382

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG--VKPDEITYLAVLTS 588
           DA R F  +   +   WNAM+   A HG   E  +LF +MSK    V+P++IT++ VL++
Sbjct: 383 DAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSA 442

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HAGLV E R     M+   GL+P++EHY+C+VDL  R GLL  A   I +MP  PD  
Sbjct: 443 CVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEI 502

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +  SLL AC    N D+G       LE++  N   YV+ S +YA+   W+D  K+R  M+
Sbjct: 503 VLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMR 562

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +  + K PG SWI +G + H F+AGDS H+ S  IY+ L
Sbjct: 563 QCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLL 601



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 216/439 (49%), Gaps = 25/439 (5%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR------FCQSGPALKLFDRLRY 74
           L+S      D   A          +I  +N ++ GLA       FC     ++L+ +L+ 
Sbjct: 67  LLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFC-----VELYYKLKS 121

Query: 75  QGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
            GL+ + FT+  L  ACG+++     +I H +  K G     Y+    I  YA+ GE+  
Sbjct: 122 LGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGF 181

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F +  D D V++ +M+ GY   G   ++  +F+EMR  G E +E +L +VLGA  D
Sbjct: 182 ARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGD 241

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           + +   G  + GF ++      V +++ +A++++Y +CG  + A ++FD +   DVV+W+
Sbjct: 242 LGDLGLGRWVEGFVLEKKM--EVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWN 299

Query: 249 ERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I   A +G   EA  LF  +R      +  TMI +LS+      L  GK ++    + 
Sbjct: 300 AIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEK 359

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G    V + +ALI MY KCG ++DA  +F+ +  K+ VSWN+MI+  + +G   +AL +F
Sbjct: 360 GLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLF 419

Query: 366 CHMLE--FSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFLLDDSMISCLITTY 422
             M +   ++ PN  T   +L A  ++  + +  Q+  S  +  G +      SC++   
Sbjct: 420 RRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLC 479

Query: 423 GKCNALNESKRVLSEIDKK 441
            +   L E+  ++ ++  K
Sbjct: 480 ARAGLLYEAWDLIKKMPGK 498



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 168/340 (49%), Gaps = 14/340 (4%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           + L+ K G   D  ++ +LI+ + +  +   A +   +  +RD++++N++ISG ++   +
Sbjct: 151 HCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFT 210

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGF 119
             A+ LF  +R +G  PD  T  S++ ACG L +      V G  L+       Y+ S  
Sbjct: 211 KEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSAL 270

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I+ Y K G+++SA   F    + D V + A++ GY  NG  +++  +F  MR  G   + 
Sbjct: 271 IDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDR 330

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++  VL A   +     G+ +     + G    V  ++ +A++++Y +CG   DAV++F
Sbjct: 331 VTMIEVLSACSTIGALDLGKWVETHASEKGLQHDV--YVASALIDMYAKCGSLDDAVRVF 388

Query: 237 DEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND--FQINEYTMINLLSSVGGERI 291
           + +   + VSW+  I+A        EA  LF+ +  ++   Q N+ T I +LS+     +
Sbjct: 389 ESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGL 448

Query: 292 LRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
           +  G+Q+ ++     G +  V   + ++ +  + G + +A
Sbjct: 449 VDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEA 488



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 18/271 (6%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           + + LI  + K  D   A R      N+D++T+NA+I+G A+   S  A+ LF+ +R  G
Sbjct: 266 MGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAG 325

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
             PD  T   ++ AC   G+L   + V     + G    VY+ S  I+ YAK G +  A 
Sbjct: 326 PHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAV 385

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG--LELNEFSLTAVLGASFD 191
             F      + V++ AM+    ++G+  ++  +F  M      ++ N+ +   VL A   
Sbjct: 386 RVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVH 445

Query: 192 ---VKEGEQI-HGFGVKVGFLSGVCNHLNNAIMNLYVRCG---QKLDAVKMF----DEIT 240
              V EG Q+     +  G +  V ++  + +++L  R G   +  D +K      DEI 
Sbjct: 446 AGLVDEGRQLFESMNLSFGLVPKVEHY--SCMVDLCARAGLLYEAWDLIKKMPGKPDEIV 503

Query: 241 EPDVVSWSERIAAACDGVEAFGLFKDLRFND 271
              ++   +R   A  G     LF ++  ++
Sbjct: 504 LGSLLGACQRRRNADVGERVIQLFLEMELSN 534


>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 599

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 178/525 (33%), Positives = 289/525 (55%), Gaps = 7/525 (1%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRF-NDFQINEYTMINLLSSVG 287
           A ++F++  EPD   ++  I A         A  ++  +R   +   ++YT   +  +  
Sbjct: 57  ATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACA 116

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
            +  +  GK++     ++G+     + ++L++ Y  CG++ +A+ +FD    KD V WN+
Sbjct: 117 SQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNA 176

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +I GY+  G    +  +F  M+E   + PN  TM  ++ A   SK+LK    +H +++K 
Sbjct: 177 LITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKD 236

Query: 407 GFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
             L +   + + LI  Y KC  L+ ++++  EI +KN V  N+L           E +EL
Sbjct: 237 MVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIEL 296

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            R +  S  + +  T S VL ACA M     G  +H  A K +   D+F+ +A+IDMY K
Sbjct: 297 LREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEK-KGIWDVFIGTALIDMYAK 355

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG I  A++ F ++   ++A WNA++ GYA HG       LF++M + G +PD IT+LAV
Sbjct: 356 CGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAV 415

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L +C H+GLV   + Y   M   + + P++EHY C+VDLLGR GLL+ A+  I  M + P
Sbjct: 416 LHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEP 475

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           +  +W +LLSAC+I+GNI++G  A   +++L   +  +YV+L+NLYASA  +N V  +R+
Sbjct: 476 NVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVRE 535

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            M EK +CK  G S I +G   H F   D  H +S+EIY  L +L
Sbjct: 536 MMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDEL 580



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 227/465 (48%), Gaps = 17/465 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  I +       + T +I+ F   A    A +    TQ  D   YNA+I   +   
Sbjct: 24  QIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQ 83

Query: 61  QSGPALKLFDRLRY-QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
               A+ +++++R  Q +  D +T+  + KAC S   +++ + VHGV +++G+    +L 
Sbjct: 84  TPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQ 143

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-L 175
           S  +  Y   GEI +A+  F +    D V + A++ GY   G    S  VF EM  +  +
Sbjct: 144 SSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEV 203

Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFL-SGVCNHLNNAIMNLYVRCGQKLD 231
             NE ++  ++ A   S ++K G  IHG+ +K   L  GV   L  A++NLYV+CG    
Sbjct: 204 RPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGV--KLEAALINLYVKCGYLDG 261

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FDEI E + V W+  I   C      E   L +++  ++ + + +T+  +LS+   
Sbjct: 262 ARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQ 321

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                 G  +  F  K G  +V  IG ALI MY KCG +  AR +FD +  ++  +WN++
Sbjct: 322 MGAFNLGNWVHRFAEKKGIWDVF-IGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAI 380

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++GY+ +G    A+++F  M E    P+  T  ++L A ++S  ++   Q    +++   
Sbjct: 381 LSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYK 440

Query: 409 LLDD-SMISCLITTYGKCNALNESKRVLS-EIDKKNAVHINALAS 451
           +        C++   G+   L E++ ++   + + N V   AL S
Sbjct: 441 IPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLS 485



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 158/315 (50%), Gaps = 7/315 (2%)

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T  S+L  +    +++Q  Q+H+  I S       +I+ +I ++     L+ + +V ++ 
Sbjct: 5   TPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQT 64

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQ 496
            + +    NA+      +     A+ +Y  +  +C+ + G   T+  V KACA+   +E+
Sbjct: 65  QEPDGFIYNAMIRAYSSSQTPCVAISIYNKM-RACQNILGDKYTYPFVFKACASQFAVEK 123

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           GK +H + ++  Y+ D F++S++++ Y  CG I +A++ F +     +  WNA++ GYA+
Sbjct: 124 GKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYAR 183

Query: 557 HGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            G   +   +F +M +   V+P+E T + ++ +C  +  ++  R     M     L   +
Sbjct: 184 QGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGV 243

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKL 673
           +  A +++L  + G L+GA+   D++P   +  +W SL+      G+++  + LL    L
Sbjct: 244 KLEAALINLYVKCGYLDGARKLFDEIP-EKNTVVWNSLICGYCQIGSLNEVIELLREMHL 302

Query: 674 LELQPDNESTYVLLS 688
             L+PD  +   +LS
Sbjct: 303 SNLKPDRFTVSGVLS 317


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 205/656 (31%), Positives = 340/656 (51%), Gaps = 19/656 (2%)

Query: 84  FSSLVKACGS---LQENEIVHGVCLKLGFSSRVY---LVSGFIENYAKSGEIVSAEMCFR 137
           + SL++ C S   +   + +H   + LG  S  Y   L+S     YA  G    A   F 
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-NEFSLTAVLGASFD---VK 193
           +  +    ++ AM+  Y  +G    +  +FV+M + G    + ++   V+ A  D    +
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G  IH   V  GF S     + N++M +Y+ CG+   A ++FD + E  +VSW+  I  
Sbjct: 141 MGALIHARTVMSGFDSDA--FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMING 198

Query: 254 ACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   EA  +F  +     + +  T++++L      + L  G+++ A        E 
Sbjct: 199 YFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGED 258

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           +S+ N+L+ MY KCG +++A+ IF  +  +D VSW +M+ GY  NG    AL + C M++
Sbjct: 259 ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL-LLCQMMQ 317

Query: 371 F-SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           F S+ PN  T+AS+L A ++  SLK    +H   I+     +  + + LI  Y KCN +N
Sbjct: 318 FESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN 377

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            S RV S+  K+     NA+ S  ++     +A+EL++ +     + N +T + +L A A
Sbjct: 378 LSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYA 437

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS--LAGW 547
            +TDL+Q + +H   +++ +   I V + +ID+Y KCG++E A   F  I +    +  W
Sbjct: 438 FLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITW 497

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           +A++ GY  HG      +LF++M + GVKP+EIT+ ++L +C HAGLV E       M +
Sbjct: 498 SAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            + +  + +HY C++DLLGR G LE A   I  M   P+  +W +LL +C I+ N++LG 
Sbjct: 558 DNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGE 617

Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           +A   L EL+P N   YVLL+N+Y++ G W D   +R  M    L K P +S I V
Sbjct: 618 VAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 261/534 (48%), Gaps = 23/534 (4%)

Query: 36  RFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR-PDAFTFSSLVKACGS 93
           R LFD  +N  + ++NA+I        S  AL LF ++   G R PD +T+  ++KACG 
Sbjct: 76  RKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGD 135

Query: 94  LQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
               E   ++H   +  GF S  ++ +  +  Y   GE+  A   F    +   V++  M
Sbjct: 136 YLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTM 195

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF 207
           + GY  NG   ++  VF  M   G+E +  ++ +VL     +KE   G ++H   V+V  
Sbjct: 196 INGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHAL-VEVKN 254

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLF 264
           L G    + N+++++Y +CG   +A  +F E+ + DVVSW+  +       D   A  L 
Sbjct: 255 L-GEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLC 313

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
           + ++F   + N  T+ ++LS+      L+ G+ +  +  +      V +  ALI MY KC
Sbjct: 314 QMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKC 373

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
             VN +  +F     + +  WN++I+G   NG   +A+++F  ML  ++ PN  T+ S+L
Sbjct: 374 NNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLL 433

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
            A +    L+QA  +H ++I+SGFL    + + LI  Y KC +L  +  + + I KK+  
Sbjct: 434 PAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKD 493

Query: 445 HINALASVLVYA-SCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            I   A +  Y    H E A+ L+  +  S  + N  TF+ +L AC+    +++G  +  
Sbjct: 494 IITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFK 553

Query: 503 LALKARYDQDIFVE----SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMM 551
             L+   D  + +     + VID+  + G +E+A    R +  R + A W A++
Sbjct: 554 FMLE---DNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALL 604



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 221/452 (48%), Gaps = 26/452 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++  + +G   D  +  +L++ +    +   A R     + R ++++N +I+G  +   
Sbjct: 145 IHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              AL +FD +  +G+ PD  T  S++  C  L+E E+   VH +         + + + 
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A+M F +    D V++T M+ GY+ NG+   +  +   M+   ++ N
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324

Query: 179 EFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L +VL A    + +K G  +HG+ ++    S V   +  A++++Y +C     + ++
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVI--VETALIDMYAKCNNVNLSFRV 382

Query: 236 FDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F + ++     W+  I+    +G+  +A  LFK +       N+ T+ +LL +      L
Sbjct: 383 FSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDL 442

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWNSMIA 350
           +  + +  +  + GF+  + +   LI +Y KCG +  A +IF+ +  KD   ++W+++IA
Sbjct: 443 QQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIA 502

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
           GY  +G    A+ +F  M++  + PN  T  SIL A S++  + + + +        F+L
Sbjct: 503 GYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFK------FML 556

Query: 411 DDSMIS-------CLITTYGKCNALNESKRVL 435
           +D+ +S       C+I   G+   L E+  ++
Sbjct: 557 EDNQMSLRTDHYTCVIDLLGRAGRLEEAYELI 588


>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
          Length = 598

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 175/562 (31%), Positives = 315/562 (56%), Gaps = 8/562 (1%)

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACD 256
           H + +K G +S +  +++N I++ Y++ G    A  +FDE+ + D VSW+  I+   +C 
Sbjct: 23  HCYAIKCGSISDI--YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80

Query: 257 GVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
            +E A+ LF  ++ +   ++ Y+   LL  +   +    G+Q+     K G+   V +G+
Sbjct: 81  KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLI 374
           +L+ MY KC +V DA   F  +   +SVSWN++IAG+ +      A  +   M ++ ++ 
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
            +  T A +L  + +        QVH+ ++K G   + ++ + +I++Y  C +++++KRV
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260

Query: 435 LSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              +   K+ +  N++ +         +A++ +  +  S  +V+   FS +L++C+ +  
Sbjct: 261 FDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT 320

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMM 552
           L+ G+ IH LA K+ +  + FV S++I MY KCG IE A++ F++I  + S   WNAM++
Sbjct: 321 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMIL 380

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
           GYAQHG      +LF++M    VK D +T+ A+LT+C H GL++E    L+ M  ++ + 
Sbjct: 381 GYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQ 440

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P++EHYA  VDLLGR GL+  AK  I+ MP+ PD  + ++ L  C   G I++     + 
Sbjct: 441 PRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANH 500

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           LLE++P++  TYV LS++Y+    W +   ++K MKE+ + K PG+SWI +      F A
Sbjct: 501 LLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNA 560

Query: 733 GDSSHSQSKEIYKELIKLYEHM 754
            D S+   ++IY  +  L + M
Sbjct: 561 EDRSNPLCQDIYMMIKDLTQEM 582



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 237/455 (52%), Gaps = 20/455 (4%)

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
            Q+  + H   +K G  S +Y+ +  +++Y K G +  A M F +    D+V++  M+ G
Sbjct: 16  FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSG 210
           Y   G+ + +  +F  M+  G +++ +S + +L     VK    GEQ+HG  +K G+   
Sbjct: 76  YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY--- 132

Query: 211 VCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKD 266
            CN ++ ++++++Y +C +  DA + F EI+EP+ VSW+  IA      D   AF L   
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192

Query: 267 LRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           +       ++  T   LL+ +         KQ+ A   K+G    ++I NA+IS Y  CG
Sbjct: 193 MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252

Query: 326 QVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
            V+DA+ +FD L   KD +SWNSMIAG+++ G    A+  F ++    +  + Y  +++L
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 312

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA- 443
            + S+  +L+   Q+H+   KSGF+ ++ +IS LI  Y KC  +  +++   +I  K++ 
Sbjct: 313 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 372

Query: 444 VHINALASVLVYAS--CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIH 501
           V  NA+  +L YA       +L+L+  +     +++  TF+ +L AC+    +++G  + 
Sbjct: 373 VAWNAM--ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 430

Query: 502 CLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
            L ++  Y     +E  +A +D+  + G +  AK 
Sbjct: 431 NL-MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKE 464



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 207/408 (50%), Gaps = 20/408 (4%)

Query: 7   IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           IK G   D  +S  ++  + KF     A     +   RD +++N +ISG     +   A 
Sbjct: 27  IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW 86

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENY 123
            LF  ++  G   D ++FS L+K   S++     E VHG+ +K G+   VY+ S  ++ Y
Sbjct: 87  CLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-----VEMR-SLGLEL 177
           AK   +  A   F++  + ++V++ A++ G+V   +    K  F     +EM+ ++ ++ 
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFV---QVRDIKTAFWLLGLMEMKAAVTMDA 203

Query: 178 NEFS-LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
             F+ L  +L         +Q+H   +K+G    +   + NA+++ Y  CG   DA ++F
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT--ICNAMISSYADCGSVSDAKRVF 261

Query: 237 DEI-TEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           D +    D++SW+  IA  A  G+  +A   F  LR ++ ++++Y    LL S      L
Sbjct: 262 DGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATL 321

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS-VSWNSMIAG 351
           + G+QI A   K GF+    + ++LI MY KCG +  AR  F  +  K S V+WN+MI G
Sbjct: 322 QLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILG 381

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           Y+++G    +LD+F  M   ++  +  T  +IL A S++  +++ +++
Sbjct: 382 YAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 429



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 194/428 (45%), Gaps = 31/428 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+IK G+  +  + ++L+  + K      AF    +    + +++NALI+G  +  
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVR 181

Query: 61  QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKA------CGSLQENEIVHGVCLKLGFSSRV 113
               A  L   +  +  +  DA TF+ L+        C  L++   VH   LKLG    +
Sbjct: 182 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEI 238

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            + +  I +YA  G +  A+  F D L    D +++ +M+ G+   G  + + + F  +R
Sbjct: 239 TICNAMISSYADCGSVSDAKRVF-DGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLR 297

Query: 172 SLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           S  +++++++ +A+L +  D+     G+QIH    K GF+S     + ++++ +Y +CG 
Sbjct: 298 SSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSN--EFVISSLIVMYSKCGI 355

Query: 229 KLDAVKMFDEITEP-DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLS 284
              A K F +I+     V+W+  I        G  +  LF  +   + +++  T   +L+
Sbjct: 356 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 415

Query: 285 SVGGERILRAGKQIQAF---CYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IF 339
           +     +++ G ++       YK+   ME  +   A + + G+ G VN A+ + + + + 
Sbjct: 416 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYA---AAVDLLGRAGLVNKAKELIESMPLN 472

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
            D +   + +      G    A  +  H+LE     + +T  S+    S+ K  ++   V
Sbjct: 473 PDPMVLKTFLGVCRACGEIEMATQVANHLLEIE-PEDHFTYVSLSHMYSDLKKWEEKASV 531

Query: 400 HSHIIKSG 407
              + + G
Sbjct: 532 KKMMKERG 539



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 90/160 (56%), Gaps = 4/160 (2%)

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            H + IK G + D  + + ++ +Y K   L  +  +  E+ K+++V  N + S   Y SC
Sbjct: 22  THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG--YTSC 79

Query: 459 HA--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +A  L+  +  S  +V+G +FS +LK  A++   + G+ +H L +K  Y+ +++V 
Sbjct: 80  GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           S+++DMY KC  +EDA  AF++I   +   WNA++ G+ Q
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 167/518 (32%), Positives = 277/518 (53%), Gaps = 3/518 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFND 271
           + N ++ +Y  CG  +D  K+FDE+   ++VSW   I+A     E   A  LF D++ + 
Sbjct: 124 IENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + N    ++LL S  G   L  GKQ+ +   +      +++  A+ +MY +CG +  A+
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD +  +++V+W  ++ GY++      AL++F  M    +  + +  + +L+     +
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLE 303

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
                 Q+HSHI+K G   + S+ + L+  Y KC  +  + R    I + N V  +AL S
Sbjct: 304 DWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
               +    + ++++ ++      +N   ++ V +ACAA  +L  G   H  A+K     
Sbjct: 364 GFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVS 423

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            ++ ESA++ MY KCG ++ A+RAF  I       W A++ GYA HG   E    F +M 
Sbjct: 424 YLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQ 483

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
            +GV+P+ +T++AVLT+C H+GLV EA+ YL  MS  +G+ P ++HY C++D   R GLL
Sbjct: 484 SYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLL 543

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
             A   I++MP  PDA  W+SLL  C  + ++ LG +A   L  L P + + Y+LL NLY
Sbjct: 544 XEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLY 603

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHH 729
           ++ G W + G +RK M E+ L KE   SWI V G  H 
Sbjct: 604 SAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHR 641



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 193/410 (47%), Gaps = 14/410 (3%)

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA    K++   D  +  ++   L  + G  R L  G+ I     +       SI N L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            MY  CG   D + +FD ++ K+ VSW  +I+ Y++NG   +A+ +F  M    + PN  
Sbjct: 130 RMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSA 189

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
              S+L++      L+   Q+HSH+I++    + ++ + +   Y +C  L  +K V   +
Sbjct: 190 VYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM 249

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           D +NAV    L      A     ALEL+  +     E++   FSIVLK C  + D + GK
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGK 309

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH   +K   + ++ V + ++D Y KCG IE A R+F +I   +   W+A++ G++Q G
Sbjct: 310 QIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSG 369

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH------GLI 612
              +   +F  +   GV  +   Y +V  +C        A+  L+  S  H      GL+
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA-------AQANLNMGSQAHGDAIKRGLV 422

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             L   + +V +  + G L+ A+   + +   PDA  W +++S    +GN
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 205/406 (50%), Gaps = 14/406 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIV 100
           ++++++  +IS  A+  +   A++LF  ++  G+RP++  + SL+++C     L+  + +
Sbjct: 151 KNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQM 210

Query: 101 HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGE 159
           H   ++   ++ + + +     Y + G +  A++ F D +D  N V +T ++ GY    +
Sbjct: 211 HSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF-DGMDAQNAVTWTGLMVGYTQAKK 269

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLN 216
            + + E+F  M   G+EL+EF  + VL     +++   G+QIH   VK+G  S V   + 
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEV--SVG 327

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
             +++ YV+CG    A + F  I+EP+ VSWS  I+         +   +F  LR     
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           +N +   ++  +   +  L  G Q      K G +  +   +A+++MY KCG+++ AR  
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F+ +   D+V+W ++I+GY+ +G   +AL  F  M  + + PN  T  ++L A S+S  +
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507

Query: 394 KQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +A Q    + +  G         C+I TY +   L E+  +++ +
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRM 553



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 188/363 (51%), Gaps = 15/363 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           Q++S +I+   + +  + T + + + +      A + +FD  + ++ +T+  L+ G  + 
Sbjct: 209 QMHSHVIRAQLNANITVETAICNMYVRCGWLEGA-KLVFDGMDAQNAVTWTGLMVGYTQA 267

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
            +   AL+LF R+  +G+  D F FS ++K C  L++ ++   +H   +KLG  S V + 
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVG 327

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K G+I SA   F    + ++V+++A++ G+  +G  +   ++F  +RS G+ 
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           LN F  T+V     A  ++  G Q HG  +K G +S +  +  +A++ +Y +CG+   A 
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYL--YGESAMVTMYSKCGRLDYAR 445

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           + F+ I EPD V+W+  I+      +  EA G F+ ++    + N  T I +L++     
Sbjct: 446 RAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSG 505

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
           ++   KQ + +     G    +   + +I  Y + G + +A  + + + F+ D++SW S+
Sbjct: 506 LVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSL 565

Query: 349 IAG 351
           + G
Sbjct: 566 LGG 568



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 6/321 (1%)

Query: 346 NSMIAGYSENGFFNQALDMFCHM--LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           N  +   S+ G   +A D    M   + S+ P+ Y    + EA    +SL     +H  +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQ--CLFEACGKLRSLADGRLIHDRL 113

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
            ++      S+ +CL+  Y  C +  + ++V  E+  KN V    + S         +A+
Sbjct: 114 RRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAI 173

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +  S    N + +  +L++C   + LE GK +H   ++A+ + +I VE+A+ +MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMY 233

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            +CG +E AK  F  +   +   W  +M+GY Q         LF +M+  GV+ DE  + 
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
            VL  CC        +   S +  L G   ++     +VD   + G +E A  +  ++  
Sbjct: 294 IVLKVCCXLEDWDMGKQIHSHIVKL-GXESEVSVGTPLVDFYVKCGDIESAYRSFGRISE 352

Query: 644 PPDAHIWQSLLSACTIYGNID 664
           P D   W +L+S  +  G ++
Sbjct: 353 PNDVS-WSALISGFSQSGRLE 372


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 217/804 (26%), Positives = 387/804 (48%), Gaps = 60/804 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K GH    + +  L++ + K        +      + D + +N ++SG +   +
Sbjct: 65  LHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNK 124

Query: 62  SGPALKLFDRLRYQGLR--PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
               +    R+ +      P++ T ++++  C   G L   + VHG  +K GF       
Sbjct: 125 CDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGG 184

Query: 117 SGFIENYAKSGEIV-SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +  +  YAK G +   A   F +    D V++ AM+ G   N   + +  +F  M     
Sbjct: 185 NALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPT 244

Query: 176 ELNEFSLTAVLG--ASFDVKE----GEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRC 226
             N  ++  +L   ASFD       G QIH + ++   LS    VCN    A+++LY++ 
Sbjct: 245 RPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCN----ALISLYLKV 300

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDL-RFNDFQINEYTMINL 282
           GQ  +A  +F  +   D+V+W+  IA      + ++A  LF +L        +  TM+++
Sbjct: 301 GQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSI 360

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           L +    + L+ GKQI A+ ++  F+    ++GNAL+S Y KCG   +A   F  +  KD
Sbjct: 361 LPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMKD 420

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            +SWNS+   + E    ++ L +   ML+  + P+  T+ +I+   ++   +++  ++HS
Sbjct: 421 LISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHS 480

Query: 402 HIIKSGFLLDDSMIS---CLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYAS 457
           + I++G LL ++  +    ++  Y KC  +  + ++   + +K+N V  N+L S  V   
Sbjct: 481 YSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLG 540

Query: 458 CHAEALELYR-------TIW-----------------GSCREVNGS-------TFSIVLK 486
            H +A  ++        T W                 G C E+          T   +L 
Sbjct: 541 SHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKPDTVTIMSLLP 600

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            C  M  +          +++ + +D+ +E+A++D Y KCG I  A + F+      L  
Sbjct: 601 VCTQMASVHLLSQCQGYIIRSCF-KDLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVM 659

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           + AM+ GYA HG   E   +F+ M K G++PD I + ++L++C HAG V E       + 
Sbjct: 660 FTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKIFYSIE 719

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            LHG+ P +E YAC+VDLL R G +  A   +  +PI  +A++W +LL AC  +  ++LG
Sbjct: 720 KLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLWGTLLGACKTHHEVELG 779

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
            +  ++L +++ ++   Y++LSNLYA+   W+ V ++R+ M+ K L K  G SWI V   
Sbjct: 780 RIVANQLFKIEANDIGNYIVLSNLYAADARWDGVMEVRRMMRNKDLKKPAGCSWIEVERT 839

Query: 727 THHFYAGDSSHSQSKEIYKELIKL 750
            + F AGD SH Q   IY  L  L
Sbjct: 840 NNIFVAGDCSHPQRSIIYSTLQTL 863



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 13/360 (3%)

Query: 243 DVVSWSERIAAAC---DGVEAFGLFKD-LRFND-FQINEYTMINLLSSVGGERILRAGKQ 297
           D  +W   I + C      EA  LF   L+ ++ F+ +   +  +L S         G+ 
Sbjct: 5   DFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRT 64

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +  +  K G          L++MY KCG + +   +FD L   D V WN +++G+S +  
Sbjct: 65  LHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNK 124

Query: 358 FNQALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
            +  +     M+  S   +PN  T+A++L   +    L     VH ++IKSGF  D    
Sbjct: 125 CDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGG 184

Query: 416 SCLITTYGKCNAL-NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
           + L++ Y KC  + +++  V   I  K+ V  NA+ + L       +A  L+ ++     
Sbjct: 185 NALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPT 244

Query: 475 EVNGSTFSIVLKACAAMTDLEQ---GKAIHCLALK-ARYDQDIFVESAVIDMYCKCGTIE 530
             N +T + +L  CA+         G+ IH   L+      D+ V +A+I +Y K G + 
Sbjct: 245 RPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMR 304

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSC 589
           +A+  F  +    L  WNA + GY  +G + +  +LF  ++    + PD +T +++L +C
Sbjct: 305 EAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPAC 364



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 20/380 (5%)

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF--SLIPNGYTMASILEAVSNSKSLK 394
           ++ +D  +W S+I         ++AL +F H L+   +  P+   +A+IL++ S   +  
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
               +H +++K G          L+  Y KC  L E  ++  ++   + V  N + S   
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 455 YAS-CHAEALELYRTIWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
            ++ C A+ + ++R +  S RE   N  T + VL  CA + DL+ GK +H   +K+ +DQ
Sbjct: 121 GSNKCDADVMRVFRMMHSS-REALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQ 179

Query: 512 DIFVESAVIDMYCKCGTI-EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           D    +A++ MY KCG +  DA   F  I    +  WNAM+ G A++    +   LF+ M
Sbjct: 180 DTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSM 239

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA-------CIVD 623
            K   +P+  T   +L  C  A   +    Y  C   +H  + Q    +        ++ 
Sbjct: 240 VKGPTRPNYATVANILPVC--ASFDKSVAYY--CGRQIHSYVLQWPELSADVSVCNALIS 295

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST 683
           L  +VG +  A+     M    D   W + ++  T  G     L     L  L+     +
Sbjct: 296 LYLKVGQMREAEALFWTMD-ARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDS 354

Query: 684 YVLLSNLYASAGMWN-DVGK 702
             ++S L A A + N  VGK
Sbjct: 355 VTMVSILPACAQLKNLKVGK 374


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 180/645 (27%), Positives = 322/645 (49%), Gaps = 7/645 (1%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           ++ ++  +  Y+ SG++ +A+  F      +   +T M+  +   G    +  +F  M  
Sbjct: 74  IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 173 LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            G+  +  ++T VL  +        +H F +K G  + V   + N +++ Y + G    A
Sbjct: 134 EGVIPDRVTVTTVL--NLPGCTVPSLHPFAIKFGLDTHV--FVCNTLLDAYCKHGLLAAA 189

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F E+ + D V+++  +          +A  LF  +R        +T  ++L+   G 
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G Q+ A   +   +  V + N+L+  Y KC  ++D R +FD +  +D+VS+N +I
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A Y+ N      L +F  M +          A++L    +   +    Q+H+ ++  G  
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +D + + LI  Y KC  L+ +K   S   +K+A+   AL +  V    H EAL+L+  +
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 429

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +    + +TFS ++KA +++  +  G+ +H   +++ Y   +F  S ++DMY KCG +
Sbjct: 430 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCL 489

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           ++A R F ++   +   WNA++  YA +G       +F  M   G  PD +T+L+VL +C
Sbjct: 490 DEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 549

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H GL  E   Y   M   + + P  EHYAC++D LGRVG     +  + +MP   D  I
Sbjct: 550 SHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPII 609

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W S+L +C I+GN +L  +A  KL  ++P + + YV+LSN+YA AG W D   ++K M++
Sbjct: 610 WTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRD 669

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + + KE GYSW+ +    + F + D +     EI  EL +LY+ M
Sbjct: 670 RGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 275/588 (46%), Gaps = 27/588 (4%)

Query: 16  ILSTTLI-SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           I S  LI S ++   D   A      + +R+  T+  ++   A   ++  AL LF  +  
Sbjct: 74  IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 75  QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           +G+ PD  T ++++   G    +  +H   +K G  + V++ +  ++ Y K G + +A  
Sbjct: 134 EGVIPDRVTVTTVLNLPGCTVPS--LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARR 191

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
            F +  D D V Y AM+ G    G   ++ ++F  MR  G+    F+ +++L  +  +  
Sbjct: 192 VFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAH 251

Query: 195 ---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
              G Q+H   ++   +  V   +NN++++ Y +C    D  ++FDE+ E D VS++  I
Sbjct: 252 LLLGHQVHALVLRSTSVLNV--FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309

Query: 252 AA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           AA     C       LF++++   F         +LS  G    +  GKQI A    +G 
Sbjct: 310 AAYAWNQC-AATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
                +GNALI MY KCG ++ A+S F     K ++SW ++I GY +NG   +AL +F  
Sbjct: 369 ASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD 428

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M    L P+  T +SI++A S+   +    Q+HS++I+SG+       S L+  Y KC  
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L+E+ R   E+ ++N++  NA+ S   +      A++++  +       +  TF  VL A
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548

Query: 488 CAAMTDLEQGKAIHCLA----LKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKIC- 540
           C+       G A  C+     +K +Y    + E  + VID   + G     ++   ++  
Sbjct: 549 CS-----HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF 603

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +     W +++     HG         +K+  FG++P + T   +L++
Sbjct: 604 KADPIIWTSILHSCRIHGNQELARVAADKL--FGMEPTDATPYVILSN 649



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 220/452 (48%), Gaps = 16/452 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   IK G      +  TL+  + K      A R   +  ++D +TYNA++ G ++   
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              AL+LF  +R  G+    FTFSS++     +        VH + L+      V++ + 
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE-- 176
            ++ Y+K   +      F +  + DNV+Y  ++  Y WN        +F EM+ LG +  
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 177 -LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            L   ++ +V G+  DV  G+QIH   V +G  S   + L NA++++Y +CG  LDA K 
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE--DLLGNALIDMYSKCGM-LDAAKS 393

Query: 236 -FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F   +E   +SW+  I          EA  LF D+R    + +  T  +++ +     +
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ ++  + G+   V  G+ L+ MY KCG +++A   FD +  ++S+SWN++I+ 
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+  G    A+ MF  ML     P+  T  S+L A S++    + M+ + H++K  + + 
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSIS 572

Query: 412 D--SMISCLITTYGKCNALNESKRVLSEIDKK 441
                 +C+I T G+    ++ +++L E+  K
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 604



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 160/297 (53%), Gaps = 17/297 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++L++++   L+  ++ +L+  ++K     D RR F    +   RD ++YN +I+  A
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD---EMPERDNVSYNVIIAAYA 313

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
               +   L+LF  ++  G       +++++   GSL +  I   +H   + LG +S   
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  I+ Y+K G + +A+  F +  +   +++TA++ GYV NG+ +++ ++F +MR  G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           L  +  + ++++ AS     +  G Q+H + ++ G+ S V +   + ++++Y +CG   +
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS--GSVLVDMYAKCGCLDE 491

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           A++ FDE+ E + +SW+  I+A     +   A  +F+ +    F  +  T +++L++
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 180/435 (41%), Gaps = 69/435 (15%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL----IF------ 339
           R+++ G  +  +   +G   ++S            G ++ AR++FD +    IF      
Sbjct: 33  RMVKTGFDVLTYRLNLGLRSLLS-----------SGHLHRARAMFDQMPHKNIFSLNLIL 81

Query: 340 ---------------------KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
                                +++ +W  M+  ++  G  + AL +F  ML   +IP+  
Sbjct: 82  SAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRV 141

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC--LITTYGKCNALNESKRVLS 436
           T+ ++L     +        +H   IK G  LD  +  C  L+  Y K   L  ++RV  
Sbjct: 142 TVTTVLNLPGCT-----VPSLHPFAIKFG--LDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           E+  K+AV  NA+         H +AL+L+  +  +       TFS +L   A M  L  
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G  +H L L++    ++FV ++++D Y KC  ++D +R F ++       +N ++  YA 
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-----CHAGLVREARTYLSCMS--DLH 609
           + C   V  LF +M K G     + Y  +L+        H G    A+  L  ++  DL 
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 374

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGL 667
           G          ++D+  + G+L+ AK           A  W +L++     G  +  L L
Sbjct: 375 G--------NALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITGYVQNGQHEEALQL 425

Query: 668 LAGSKLLELQPDNES 682
            +  +   L+PD  +
Sbjct: 426 FSDMRRAGLRPDRAT 440



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S LI++G+       + L+  + K      A R   +   R+ I++NA+IS  A + 
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
           ++  A+K+F+ + + G  PD+ TF S++ AC     N +              Y +S + 
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS---HNGLADECMKYFHLMKHQYSISPWK 575

Query: 121 ENYAKSGEIVSAEMCF 136
           E+YA   + +    CF
Sbjct: 576 EHYACVIDTLGRVGCF 591


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 195/689 (28%), Positives = 346/689 (50%), Gaps = 26/689 (3%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           DA+    L ++C + +    VH   ++   S  ++L +  +  Y + G    A     + 
Sbjct: 17  DAYYLHHL-RSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEM 73

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNEFSLTAVL---GASFDVKEG 195
              + V++  ++  Y   G+ + S E F   R S G+  + F+  A L     +  ++EG
Sbjct: 74  PRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREG 133

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE------ 249
           + +H   V  G   GV   ++N+++++Y RCG    A ++FD   E D VSW+       
Sbjct: 134 KAVHALSVLEGIAGGV--FVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYV 191

Query: 250 RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG--ERILRAGKQIQAFCYKVGF 307
           R  A  D +  F +   +R +   +N + + +++    G  + ++     +     K GF
Sbjct: 192 RAGAQDDMLRVFAM---MRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGF 248

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN------GFFNQA 361
              V + +A++ MY K G +++A ++F  ++  + V +N+MIAG   +          +A
Sbjct: 249 DSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREA 308

Query: 362 LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
           L ++  +    + P  +T +S++ A + +  ++   Q+H  ++K  F  DD + S LI  
Sbjct: 309 LSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDL 368

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y     + +  R  + + K++ V   A+ S  V       AL L+  + G+  + +  T 
Sbjct: 369 YLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTI 428

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           S V+ ACA++     G+ I C A K+ + +   + ++ I MY + G +  A R F+++  
Sbjct: 429 SSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMES 488

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             +  W+A++  +AQHGC  +    FN+M    V P+EIT+L VLT+C H GLV E   Y
Sbjct: 489 HDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKY 548

Query: 602 LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
              M + + L P ++H  C+VDLLGR G L  A+  I       +  IW+SLL++C I+ 
Sbjct: 549 YETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHR 608

Query: 662 NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           +++ G L   +++ELQP + ++YV L N+Y  AG  +   K+R  MKE+ + KEPG SWI
Sbjct: 609 DMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWI 668

Query: 722 HVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            +    H F AGD SH +S  IY +L ++
Sbjct: 669 ELRSGVHSFVAGDKSHPESNAIYSKLAEM 697



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 268/563 (47%), Gaps = 28/563 (4%)

Query: 12  HLDP--ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           H  P   L  TL++ + +     R  R L +    + +++N LI   +R  Q   +L+ F
Sbjct: 44  HPSPSLFLRNTLLAAYCRLGGHAR--RLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETF 101

Query: 70  DRLRYQ-GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
            R R   G+R D FT+++ + AC   G L+E + VH + +  G +  V++ +  +  YA+
Sbjct: 102 ARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYAR 161

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G++  A   F    + D+V++ A+V GYV  G  D    VF  MR  G+ LN F+L +V
Sbjct: 162 CGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSV 221

Query: 186 L----GASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           +    G+   V +    +HG  VK GF S V   L +A++ +Y + G   +AV +F  + 
Sbjct: 222 IKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV--FLASAMVGMYAKKGALSEAVALFKSVL 279

Query: 241 EPDVVSWSERIAAACDG---------VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +P+VV ++  IA  C            EA  L+ +++    +  E+T  +++ +      
Sbjct: 280 DPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGD 339

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  GKQI     K  F     IG+ALI +Y   G + D    F  +  +D V+W +MI+G
Sbjct: 340 IEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISG 399

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
             +N  F +AL +F  +L   L P+ +T++S++ A ++    +   Q+     KSGF   
Sbjct: 400 CVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRF 459

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            +M +  I  Y +   ++ + R   E++  + V  +A+ S      C  +AL  +  +  
Sbjct: 460 TAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVD 519

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
           +    N  TF  VL AC+    +++G   +   +K  Y     ++  + V+D+  + G +
Sbjct: 520 AKVVPNEITFLGVLTACSHGGLVDEGLKYY-ETMKEEYALSPTIKHCTCVVDLLGRAGRL 578

Query: 530 EDAKRAFR-KICRDSLAGWNAMM 551
            DA+   R  I  D    W +++
Sbjct: 579 ADAEAFIRDSIFHDEPVIWRSLL 601



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 231/451 (51%), Gaps = 24/451 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           +++L +  G      +S +L+S + +  D  +A R +FD  + RD +++NAL+SG  R  
Sbjct: 136 VHALSVLEGIAGGVFVSNSLVSMYARCGDMGQA-RQVFDAADERDDVSWNALVSGYVRAG 194

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
                L++F  +R  G+  ++F   S++K C    +  +     VHG  +K GF S V+L
Sbjct: 195 AQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFL 254

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY------VWNGEFDKSKEVFVE 169
            S  +  YAK G +  A   F+  LD + V + AM+ G       V      ++  ++ E
Sbjct: 255 ASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSE 314

Query: 170 MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           ++S G+E  EF+ ++V+ A   + D++ G+QIHG  +K  F     + + +A+++LY+  
Sbjct: 315 VQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGD--DFIGSALIDLYLNS 372

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL 283
           G   D  + F  + + DVV+W+  I+          A  LF +L     + + +T+ +++
Sbjct: 373 GCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVM 432

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           ++     + R G+QIQ F  K GF    ++GN+ I MY + G V+ A   F  +   D V
Sbjct: 433 NACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIV 492

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW+++I+ ++++G    AL  F  M++  ++PN  T   +L A S+   + + ++ +   
Sbjct: 493 SWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY-ET 551

Query: 404 IKSGFLLDDSM--ISCLITTYGKCNALNESK 432
           +K  + L  ++   +C++   G+   L +++
Sbjct: 552 MKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K+    D  + + LI  +         FR       +D++T+ A+ISG  +  
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNE 404

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  L   GL+PD FT SS++ AC SL   +  E +     K GF     + +
Sbjct: 405 LFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGN 464

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YA+SG++ +A   F++    D V+++A++  +  +G    +   F EM    +  
Sbjct: 465 SCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVP 524

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE +   VL A      V EG + +    +   LS    H    +++L  R G+  DA  
Sbjct: 525 NEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHC-TCVVDLLGRAGRLADAEA 583

Query: 235 MF-DEITEPDVVSWSERIAA 253
              D I   + V W   +A+
Sbjct: 584 FIRDSIFHDEPVIWRSLLAS 603


>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
 gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
          Length = 623

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 188/623 (30%), Positives = 323/623 (51%), Gaps = 22/623 (3%)

Query: 83  TFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           T+ +L+K  G   SL +   VH   +  G     YL +  ++ Y + G +  A   FR  
Sbjct: 4   TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGE 196
              +  ++T ++   V NGE  +  E+   M   G E N+ +  ++LGA   + D+  G+
Sbjct: 64  HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123

Query: 197 QIH----GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           +IH      G++   ++G      NA++N+Y  C    +A  +F+ +   DVVSW+  I+
Sbjct: 124 KIHERVRAKGLETDIITG------NALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIIS 177

Query: 253 A---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
           A   A   +EA  L++ +     + +  T+I++L +    R L  GK I       G   
Sbjct: 178 AYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVET 237

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V +G A++S YGKC  V+DAR +FD ++ KD V WN+MI  Y++N    +A  ++  M+
Sbjct: 238 DVFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMV 297

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           E  + PN  T+ ++L++ S++  +++   +H      G+L   S+++ LI  Y KC +L 
Sbjct: 298 ENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLE 357

Query: 430 ESKRVLSEIDKK--NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
            + RV  E   +  N +  N +         + EAL++Y  +     + +  T+  VL  
Sbjct: 358 NATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAV 417

Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
           CA   D   G+ +H  +L      D+ V++++I +Y  CG +E A+ AF  +   ++  W
Sbjct: 418 CANFGDFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKNVVSW 476

Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
           ++++  YA++G      NLF  M++ GV P+ +T+ +VL +C HAGL  E  +Y   M  
Sbjct: 477 SSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQG 536

Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
            H L P  EHY C+V+LL + G ++ A   +  MP+ PDA  W+SLL AC ++ + + G 
Sbjct: 537 DHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGA 596

Query: 668 LAGSKLLELQPDNESTYVLLSNL 690
           LA  +LL+ +P N + YVLL N+
Sbjct: 597 LAAKQLLDAEPRNSAAYVLLYNI 619



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 262/551 (47%), Gaps = 47/551 (8%)

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           G S  + +G ++H   +  G       +L N ++ +Y RCG   DA   F  I + +V S
Sbjct: 13  GNSKSLADGRRVHSQMISNGLDGDT--YLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFS 70

Query: 247 WSERIAAACDGVEAFGLFKDLRFNDFQ---INEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  I+      EA    + L+F D +    N+ T I+LL +      L  GK+I     
Sbjct: 71  WTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVR 130

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
             G    +  GNAL++MY  C  +++AR +F+ ++F+D VSW  +I+ Y+  G+  +AL 
Sbjct: 131 AKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQ 190

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           ++  M +    P+  T+ S+LEA ++ ++L +   +H  I+ SG   D  + + +++ YG
Sbjct: 191 LYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYG 250

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC A++++++V   I  K+ V  NA+        C  +A  LY  +  +    N  T   
Sbjct: 251 KCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLIT 310

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L +C++   +E+G ++H  A    Y     V +A+I+MY KCG++E+A R F +    +
Sbjct: 311 LLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRT 370

Query: 544 --LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTY 601
             +  WN M++  AQ     E   ++++M++ G+K  ++TY  VL  C + G     R  
Sbjct: 371 TNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREV 430

Query: 602 LS------CMSD--------LHGLIPQLE---------------HYACIVDLLGRVGLLE 632
            S      C SD        L+G    LE                ++ IV    R G  +
Sbjct: 431 HSRSLATGCCSDVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEED 490

Query: 633 GAK---MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL-----LAGSKLLELQPDNESTY 684
            A+    T++Q  + P+   + S+L AC+  G  D G      + G   LE  P++   Y
Sbjct: 491 RARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEH---Y 547

Query: 685 VLLSNLYASAG 695
             + NL A +G
Sbjct: 548 GCMVNLLAKSG 558



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 199/402 (49%), Gaps = 16/402 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+  +   G   D I    L++ +T       A R +F+    RD++++  +IS  A  
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEA-RLVFERMVFRDVVSWTIIISAYAHA 182

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLV 116
                AL+L+ R+  +  RPDA T  S+++AC SL+   E + +H   +  G  + V++ 
Sbjct: 183 GYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVG 242

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y K   +  A   F   +D D V + AM+  Y  N   +K+  +++EM    + 
Sbjct: 243 TAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMR 302

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N+ +L  +L    ++  ++ G  +H      G+LS     + NA++N+Y +CG   +A 
Sbjct: 303 PNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHT--SVVNALINMYAKCGSLENAT 360

Query: 234 KMFDEITE--PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           ++F E T    +V++W+  I A       +EA  ++  +     + ++ T   +L+    
Sbjct: 361 RVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCAN 420

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
                 G+++ +     G    V + N+LI +YG CG +  A++ F+ +  K+ VSW+S+
Sbjct: 421 FGDFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSI 479

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           +A Y+ NG  ++A ++F  M +  ++PN  T  S+L A S++
Sbjct: 480 VAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHA 521



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 224/503 (44%), Gaps = 20/503 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           +++S +I NG   D  L   L+  + +     D R AFR +     R++ ++  LIS L 
Sbjct: 23  RVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI---HQRNVFSWTILISLLV 79

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
           +  ++   L+L   +  +G   +  TF SL+ AC   G L   + +H      G  + + 
Sbjct: 80  QNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDII 139

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
             +  +  Y     +  A + F   +  D V++T ++  Y   G   ++ +++  M    
Sbjct: 140 TGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEF 199

Query: 175 LELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
              +  +L +VL A   ++   EG+ IH   V  G  + V   +  A+++ Y +C    D
Sbjct: 200 SRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDV--FVGTAVVSFYGKCEAVDD 257

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD I + D+V W+  I A        +AF L+ ++  N  + N+ T+I LL S   
Sbjct: 258 ARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSS 317

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWN 346
              +  G  +       G++   S+ NALI+MY KCG + +A  +F     + +  ++WN
Sbjct: 318 TCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWN 377

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI   ++     +AL ++  M +  +  +  T  ++L   +N        +VHS  + +
Sbjct: 378 TMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLAT 437

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G    D + + LI  YG C  L  ++     +  KN V  +++ +          A  L+
Sbjct: 438 G-CCSDVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLF 496

Query: 467 RTIWGSCREVNGSTFSIVLKACA 489
            T+       N  TF+ VL AC+
Sbjct: 497 WTMNQDGVLPNIVTFTSVLHACS 519


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 201/704 (28%), Positives = 358/704 (50%), Gaps = 12/704 (1%)

Query: 48  TYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL 107
           ++N+L+S L+        L+ +  ++    + DA+TF SL KAC +L  N   HG+ L  
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNL--NLFSHGLSLHQ 73

Query: 108 -----GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
                G S   Y+ S  I  YAK G I      F   L  + V +T ++  Y   G+ D 
Sbjct: 74  SVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDI 133

Query: 163 SKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +  +F +MR  G++    +L ++L     +     +H   +  GF S +   L+N+++N+
Sbjct: 134 AFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLA--LSNSMVNM 191

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y +CG+  DA ++F+ I   D+VSW+  ++A        E   L + ++  D + ++ T 
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            + LS+   +  LR GK +     K G      + +AL+ +Y +C  ++ A  +F     
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD V W +MI+G  +N   ++AL +F  M+E ++ P+  T+AS L A +          +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H ++++ G +LD    + L+T Y KCN L +S  + +++ +K+ V  NA+ +        
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           ++ +  +  +  S    +  T + +L+AC +   L QGK IH   L++     I  E+A+
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           +DMY KCG +E+A++ F  + +  L  W+ +++GY  +G        +++    G++P+ 
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           + +++VL++C H GL+ +  +    M+    + P LEH AC+VDLL R G ++ A     
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            M   P   +   LL AC + G ++LG +    + EL+P +   +V L+N YAS   W+ 
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDG 671

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           V K   +M+   L K PG+S I V G T  F+A  +SH + ++I
Sbjct: 672 VEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKI 715



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 267/549 (48%), Gaps = 11/549 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFC 60
           ++  ++ NG   D  + ++LIS + KF       R +FDT   R+++ +  +I   +R  
Sbjct: 71  LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLG-RKVFDTMLKRNVVPWTTIIGSYSREG 129

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               A  +F ++R  G++P + T  SL+     L     +H + +  GF S + L +  +
Sbjct: 130 DIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMV 189

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K G I  A   F      D V++ +++  Y   G  ++  ++   M+   ++ ++ 
Sbjct: 190 NMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQ 249

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  + L AS    D++ G+ +HG  +K G    +  H+ +A++ LY+RC     A K+F 
Sbjct: 250 TFCSALSASAIKGDLRLGKLVHGLMLKDGL--NIDQHVESALVVLYLRCRCLDPAYKVFK 307

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
             TE DVV W+  I+         +A G+F  +  ++ + +  T+ + L++         
Sbjct: 308 STTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G  I  +  + G M  +   N+L++MY KC ++  + SIF+ ++ KD VSWN+++AG+++
Sbjct: 368 GASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAK 427

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG+ ++ +  F  M +  L P+  T+ S+L+A  ++ +L Q   +H+ +++S  +     
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMT 487

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y KC  L  +++    + +++ V  + L     +      AL  Y    G+  
Sbjct: 488 ETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGM 547

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           E N   F  VL AC+    + +G +I+  +    R   ++   + V+D+  + G +++A 
Sbjct: 548 EPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAY 607

Query: 534 RAFRKICRD 542
             ++ + ++
Sbjct: 608 SFYKMMFKE 616


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 181/645 (28%), Positives = 326/645 (50%), Gaps = 7/645 (1%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           ++ ++  +  Y+ SG++ +A+  F      +   +T M+  +   G    +  +F  M  
Sbjct: 74  IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 173 LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            G+  +  ++T VL  +        +H F +K G  + V   + N +++ Y + G    A
Sbjct: 134 EGVIPDRVTVTTVL--NLPGCTVPSLHPFAIKFGLDTHV--FVCNTLLDAYCKHGLLAAA 189

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++F E+ + D V+++  +   + +G+  +A  LF  +R        +T  ++L+   G 
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G Q+ A   +   +  V + N+L+  Y KC  ++D R +FD +  +D+VS+N +I
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           A Y+ N      L +F  M +          A++L    +   +    Q+H+ ++  G  
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +D + + LI  Y KC  L+ +K   S   +K+A+   AL +  V    H EAL+L+  +
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDM 429

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
             +    + +TFS ++KA +++  +  G+ +H   +++ Y   +F  S ++DMY KCG +
Sbjct: 430 RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCL 489

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           ++A R F ++   +   WNA++  YA +G       +F  M   G  PD +T+L+VL +C
Sbjct: 490 DEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 549

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H GL  E   Y   M   + + P  EHYAC++D LGRVG     +  + +MP   D  I
Sbjct: 550 SHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPII 609

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W S+L +C I+GN +L  +A  KL  ++P + + YV+LSN+YA AG W D   ++K M++
Sbjct: 610 WTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRD 669

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           + + KE GYSW+ +    + F + D +     EI  EL +LY+ M
Sbjct: 670 RGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/602 (25%), Positives = 279/602 (46%), Gaps = 27/602 (4%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           ++S ++   D   A      + +R+  T+  ++   A   ++  AL LF  +  +G+ PD
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 81  AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
             T ++++   G    +  +H   +K G  + V++ +  ++ Y K G + +A   F +  
Sbjct: 140 RVTVTTVLNLPGCTVPS--LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 197

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQ 197
           D D V Y AM+ G    G   ++ ++F  MR  G+    F+ +++L  +  +     G Q
Sbjct: 198 DKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQ 257

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---- 253
           +H   ++   +  V   +NN++++ Y +C    D  ++FDE+ E D VS++  IAA    
Sbjct: 258 VHALVLRSTSVLNV--FVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315

Query: 254 ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
            C       LF++++   F         +LS  G    +  GKQI A    +G      +
Sbjct: 316 QC-AATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 374

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
           GNALI MY KCG ++ A+S F     K ++SW ++I GY +NG   +AL +F  M    L
Sbjct: 375 GNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
            P+  T +SI++A S+   +    Q+HS++I+SG+       S L+  Y KC  L+E+ R
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALR 494

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              E+ ++N++  NA+ S   +      A++++  +       +  TF  VL AC+    
Sbjct: 495 TFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS---- 550

Query: 494 LEQGKAIHCLA----LKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAG 546
              G A  C+     +K +Y    + E  + VID   + G     ++   ++  +     
Sbjct: 551 -HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPII 609

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAGLVREARTYLSCM 605
           W +++     HG         +K+  FG++P + T   +L++    AG   +A      M
Sbjct: 610 WTSILHSCRIHGNQELARVAADKL--FGMEPTDATPYVILSNIYARAGQWEDAACVKKIM 667

Query: 606 SD 607
            D
Sbjct: 668 RD 669



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 220/452 (48%), Gaps = 16/452 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   IK G      +  TL+  + K      A R   +  ++D +TYNA++ G ++   
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              AL+LF  +R  G+    FTFSS++     +        VH + L+      V++ + 
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE-- 176
            ++ Y+K   +      F +  + DNV+Y  ++  Y WN        +F EM+ LG +  
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 177 -LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            L   ++ +V G+  DV  G+QIH   V +G  S   + L NA++++Y +CG  LDA K 
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE--DLLGNALIDMYSKCGM-LDAAKS 393

Query: 236 -FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F   +E   +SW+  I          EA  LF D+R    + +  T  +++ +     +
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           +  G+Q+ ++  + G+   V  G+ L+ MY KCG +++A   FD +  ++S+SWN++I+ 
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+  G    A+ MF  ML     P+  T  S+L A S++    + M+ + H++K  + + 
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSIS 572

Query: 412 D--SMISCLITTYGKCNALNESKRVLSEIDKK 441
                 +C+I T G+    ++ +++L E+  K
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 604



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 160/297 (53%), Gaps = 17/297 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q+++L++++   L+  ++ +L+  ++K     D RR F    +   RD ++YN +I+  A
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD---EMPERDNVSYNVIIAAYA 313

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
               +   L+LF  ++  G       +++++   GSL +  I   +H   + LG +S   
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  I+ Y+K G + +A+  F +  +   +++TA++ GYV NG+ +++ ++F +MR  G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           L  +  + ++++ AS     +  G Q+H + ++ G+ S V +   + ++++Y +CG   +
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS--GSVLVDMYAKCGCLDE 491

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSS 285
           A++ FDE+ E + +SW+  I+A     +   A  +F+ +    F  +  T +++L++
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 180/435 (41%), Gaps = 69/435 (15%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL----IF------ 339
           R+++ G  +  +   +G   ++S            G ++ AR++FD +    IF      
Sbjct: 33  RMVKTGFDVLTYRLNLGLRSLLS-----------SGHLHRARAMFDQMPHKNIFSLNLIL 81

Query: 340 ---------------------KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
                                +++ +W  M+  ++  G  + AL +F  ML   +IP+  
Sbjct: 82  SAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRV 141

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC--LITTYGKCNALNESKRVLS 436
           T+ ++L     +        +H   IK G  LD  +  C  L+  Y K   L  ++RV  
Sbjct: 142 TVTTVLNLPGCT-----VPSLHPFAIKFG--LDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           E+  K+AV  NA+         H +AL+L+  +  +       TFS +L   A M  L  
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G  +H L L++    ++FV ++++D Y KC  ++D +R F ++       +N ++  YA 
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-----CHAGLVREARTYLSCMS--DLH 609
           + C   V  LF +M K G     + Y  +L+        H G    A+  L  ++  DL 
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 374

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGL 667
           G          ++D+  + G+L+ AK           A  W +L++     G  +  L L
Sbjct: 375 G--------NALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITGYVQNGQHEEALQL 425

Query: 668 LAGSKLLELQPDNES 682
            +  +   L+PD  +
Sbjct: 426 FSDMRRAGLRPDRAT 440



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 5/125 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S LI++G+       + L+  + K      A R   +   R+ I++NA+IS  A + 
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLK-LGFSSRVYLVSGF 119
           ++  A+K+F+ + + G  PD+ TF S++ AC     +  +   C+K        Y +S +
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS----HNGLADECMKYFHLMKHQYSISPW 574

Query: 120 IENYA 124
            E+YA
Sbjct: 575 KEHYA 579


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/465 (35%), Positives = 257/465 (55%), Gaps = 1/465 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           + +++    + L   ++I A      F     + N+LI MY KC  V DAR++FD +  K
Sbjct: 56  SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D VSW S+IAGY++N    +A+ +   ML+    PNG+T AS+L+A           Q+H
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  +K G+  D  + S L+  Y +C  ++ +  V  ++D KN V  NAL S         
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
            AL  +  +  +  E    T+S V  + A +  LEQGK +H   +K+R     FV + ++
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLL 295

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY K G++ DA++ F ++    L  WN+M+  +AQ+G   E  + F +M K GV  ++I
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQI 355

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+L +LT+C H GLV+E + Y   M + + L P+++HY  +V LLGR GLL  A + I +
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNYALVFIFK 414

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP+ P A +W +LL+AC ++ N  +G  A   + EL PD+    VLL N+YAS G W+  
Sbjct: 415 MPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAA 474

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
            ++R  MK   + KEP  SW+ +    H F A D +H Q++EIYK
Sbjct: 475 ARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYK 519



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 155/287 (54%), Gaps = 3/287 (1%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFND 271
           L+N+++++Y +C   LDA  +FD++   D+VSW+  IA        VEA GL   +    
Sbjct: 88  LDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGR 147

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+ N +T  +LL + G       G+QI A   K G+ E V +G+AL+ MY +CG+++ A 
Sbjct: 148 FKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMAT 207

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           ++FD L  K+ VSWN++I+G++  G    AL  F  ML        +T +S+  +++   
Sbjct: 208 AVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLG 267

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L+Q   VH+H+IKS   L   + + L+  Y K  ++ ++++V   +D K+ V  N++ +
Sbjct: 268 ALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLT 327

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
                    EA+  +  +  S   +N  TF  +L AC+    +++GK
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGK 374



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 158/342 (46%), Gaps = 11/342 (3%)

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLG---FSSRVYLVSGFIEN 122
           L+  D L    L P    + S + AC   +  E    +   LG   F+   +L +  I  
Sbjct: 36  LRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHM 95

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y K   ++ A   F      D V++T+++ GY  N    ++  +   M     + N F+ 
Sbjct: 96  YCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTF 155

Query: 183 TAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            ++L   GA  D   G QIH   VK G+   V  ++ +A++++Y RCG+   A  +FD++
Sbjct: 156 ASLLKAAGAYADSGTGRQIHALAVKCGWHEDV--YVGSALLDMYARCGKMDMATAVFDKL 213

Query: 240 TEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
              + VSW+  I   A   DG  A   F ++  N F+   +T  ++ SS+     L  GK
Sbjct: 214 DSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
            + A   K        +GN L+ MY K G + DAR +FD +  KD V+WNSM+  +++ G
Sbjct: 274 WVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYG 333

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
              +A+  F  M +  +  N  T   IL A S+   +K+  +
Sbjct: 334 LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 11/348 (3%)

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
           L P      S + A + SK+L+ A ++H+H+  S F  D  + + LI  Y KC ++ +++
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            V  ++ +K+ V   +L +         EA+ L   +     + NG TF+ +LKA  A  
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
           D   G+ IH LA+K  + +D++V SA++DMY +CG ++ A   F K+   +   WNA++ 
Sbjct: 167 DSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGL 611
           G+A+ G        F +M + G +    TY +V +S    G + + +  +   +     L
Sbjct: 227 GFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKL 286

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
              + +   ++D+  + G +  A+   D++    D   W S+L+A   YG   LG  A S
Sbjct: 287 TAFVGN--TLLDMYAKSGSMIDARKVFDRVD-NKDLVTWNSMLTAFAQYG---LGKEAVS 340

Query: 672 KLLELQPD----NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
              E++      N+ T++ +    +  G+  +  +  + MKE  L  E
Sbjct: 341 HFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPE 388



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 175/353 (49%), Gaps = 22/353 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRL 72
           D  L  +LI  + K      A R +FD   R D++++ +LI+G A+      A+ L   +
Sbjct: 85  DAFLDNSLIHMYCKCRSVLDA-RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGM 143

Query: 73  RYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
                +P+ FTF+SL+KA G+  ++     +H + +K G+   VY+ S  ++ YA+ G++
Sbjct: 144 LKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKM 203

Query: 130 VSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV--- 185
             A   F D LD  N V++ A++ G+   G+ + +   F EM   G E   F+ ++V   
Sbjct: 204 DMATAVF-DKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSS 262

Query: 186 ---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
              LGA   +++G+ +H   +K      +   + N ++++Y + G  +DA K+FD +   
Sbjct: 263 IARLGA---LEQGKWVHAHVIKS--RQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNK 317

Query: 243 DVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           D+V+W+  + A      G EA   F+++R +   +N+ T + +L++     +++ GK+  
Sbjct: 318 DLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYF 377

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIAG 351
               +      +     ++++ G+ G +N A   IF   +   +  W +++A 
Sbjct: 378 EMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 6/203 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K G H D  + + L+  + +      A        +++ +++NALISG AR  
Sbjct: 173 QIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL  F  +   G     FT+SS+   +   G+L++ + VH   +K       ++ +
Sbjct: 233 DGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGN 292

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG ++ A   F    + D V + +M+  +   G   ++   F EMR  G+ L
Sbjct: 293 TLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYL 352

Query: 178 NEFSLTAVLGASFD---VKEGEQ 197
           N+ +   +L A      VKEG++
Sbjct: 353 NQITFLCILTACSHGGLVKEGKR 375


>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 159/430 (36%), Positives = 249/430 (57%), Gaps = 17/430 (3%)

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G +  AR++FD +   ++  WN+MI GYS +    +AL ++ HML  S+  N YT   +L
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +A S+  +L++  Q+H+HIIK GF  +    + L+  Y K   +  ++ +  ++D+++  
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT- 184

Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
                           EAL L+  +  +  +++       L+ACA +  L+QGK IH   
Sbjct: 185 ----------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI 228

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
            K   + D  +   +IDMY KCG +E+A   FRK+    ++ W AM+ GYA HG   E  
Sbjct: 229 KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREAL 288

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
             F KM   GV+P+++T+  +LT+C HAGLV EA+     M  +HG  P +EHY C+VDL
Sbjct: 289 EWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDL 348

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
           LGR GLL+ A+  I+ MP+ P+A IW +LL+AC I+GN++LG   G  L+++ P +   Y
Sbjct: 349 LGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRY 408

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           + L++++A+AG WN   ++R++MKE+ + K PG S I V G  H F AGD SH Q KEI 
Sbjct: 409 IHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEID 468

Query: 745 KELIKLYEHM 754
             L ++ E +
Sbjct: 469 HMLEQIVERL 478



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 173/391 (44%), Gaps = 29/391 (7%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA--KSGEIVSAEMCFRDCLDLDN 144
           L++ C +++E   +HG  LK G        S  +   A   SG +  A   F      + 
Sbjct: 24  LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGF 201
             +  M+ GY  + E +++  ++  M    +  N ++   +L A      ++E +QIH  
Sbjct: 84  FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAH 143

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAF 261
            +K+GF S +  +  N+++N+Y + G    A  +FD++ + D               EA 
Sbjct: 144 IIKMGFGSEI--YTTNSLLNVYSKSGDIKSARLLFDQVDQRDT--------------EAL 187

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            LF  ++    +++   +++ L +     +L  GK I A+  K        +G  LI MY
Sbjct: 188 NLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMY 247

Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            KCG + +A  +F  +  K    W +MI+GY+ +G   +AL+ F  M    + PN  T  
Sbjct: 248 AKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFT 307

Query: 382 SILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEID- 439
            IL A S++  + +A  +   + +  GF        C++   G+   L E++ ++  +  
Sbjct: 308 GILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPV 367

Query: 440 KKNAVHINALASVLVYASCHAEA-LELYRTI 469
           K NA    AL +     +CH    LEL + I
Sbjct: 368 KPNAAIWGALLN-----ACHIHGNLELGKQI 393



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 167/362 (46%), Gaps = 32/362 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAF-RFLFDTQNR-DIITYNALISGLAR 58
           QI+  ++K G  LD I ++ L++          A+ R +FD   R +   +N +I G + 
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             +   AL L+  + Y  +  +A+TF  L+KAC S   L+E + +H   +K+GF S +Y 
Sbjct: 96  SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYT 155

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  Y+KSG+I SA + F      D  A                   +F  M++ G+
Sbjct: 156 TNSLLNVYSKSGDIKSARLLFDQVDQRDTEALN-----------------LFHRMQTAGI 198

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +L+  +L + L A  D   + +G+ IH +  K      +   L   ++++Y +CG   +A
Sbjct: 199 KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI--EIDPILGCVLIDMYAKCGDLEEA 256

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           +++F ++ E  V  W+  I   A    G EA   F  ++    + N+ T   +L++    
Sbjct: 257 IEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHA 316

Query: 290 RILRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNS 347
            ++   K +     ++ GF   +     ++ + G+ G + +A  + + +  K + + W +
Sbjct: 317 GLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGA 376

Query: 348 MI 349
           ++
Sbjct: 377 LL 378



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 38/295 (12%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKR 433
           N      +L+  SN + L+Q   +H  ++K+G +LD+   S L+      N  +L  ++ 
Sbjct: 17  NAAQTLHLLQRCSNMEELRQ---IHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYART 73

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
           V   I + N    N +      +    EAL LY  +       N  TF  +LKAC++M+ 
Sbjct: 74  VFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMM 552
           LE+ + IH   +K  +  +I+  ++++++Y K G I+ A+  F ++  RD+         
Sbjct: 134 LEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT--------- 184

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
                    E  NLF++M   G+K D +  ++ L +C   G++ + +        +H  I
Sbjct: 185 ---------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKW-------IHAYI 228

Query: 613 PQLE-----HYACI-VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
            + E        C+ +D+  + G LE A     +M       +W +++S   I+G
Sbjct: 229 KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHG 282


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 213/735 (28%), Positives = 356/735 (48%), Gaps = 43/735 (5%)

Query: 24  HFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL--RPDA 81
            F  F   +   + L  +    I + N  +    R   S  AL LF +    G     D 
Sbjct: 21  QFKYFHSSKHVHQPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQ 80

Query: 82  FTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCL 140
            T + ++KAC G  +    +H   +  GF S V + +  +  Y K+G    A + F +  
Sbjct: 81  VTVAIVLKACCGDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLN 140

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQ 197
           + D V++  ++ G+  +   D +    + M   G+  +  + T VL    D +    G Q
Sbjct: 141 NPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQ 197

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
           +H   +K G    V   + NA++ +Y RC + ++A +                      G
Sbjct: 198 LHSRILKCGLDCEV--FVGNALITMYSRCCRLVEARR-------------------GNSG 236

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           +EA  +F ++     +++  +    +S+ G  +    G+QI +   K+G+   V + N L
Sbjct: 237 LEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVL 296

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           IS Y KC  + DA+ +F+ +I ++ VSW +MI+   E+     A  +F  M    + PN 
Sbjct: 297 ISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVYPND 351

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T   ++ A++    +++   +H   +K+ FL + ++ + LIT Y K  ++++S +V  E
Sbjct: 352 VTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEE 411

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK--ACAAMTDLE 495
           ++ +  +  N+L S         EAL+ + +     R  N  TF  VL   A A    + 
Sbjct: 412 LNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRP-NEFTFGSVLSSIASAEAISMR 470

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            G+  H   LK   + +  V SA++DMY K G+I ++   F +    +   W A++  +A
Sbjct: 471 HGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHA 530

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           +HG Y  V NLF  M + GVKPD IT+LAV+T+C   G+V       + M   H + P  
Sbjct: 531 RHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSP 590

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY+ +VD+LGR G L+ A+  + Q+P      + QSLL AC I+GN+D+       L+E
Sbjct: 591 EHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIE 650

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG-----YTHHF 730
           ++P    +YVL+SNLYA  G W  V K+RK M+E+ + KE G+SW+ VG      Y H F
Sbjct: 651 MEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGF 710

Query: 731 YAGDSSHSQSKEIYK 745
            + D  H QS+EIY+
Sbjct: 711 SSDDKFHPQSEEIYR 725



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 270/548 (49%), Gaps = 51/548 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  I +G      +  +L++ + K   F RA     +  N DI+++N ++SG  R  
Sbjct: 99  QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR-- 156

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLV 116
            S  AL    R+ + G+  DA T ++++  C S  E  I    +H   LK G    V++ 
Sbjct: 157 -SDDALNFALRMNFTGVAFDAVTCTTVLAFC-SDHEGFIFGFQLHSRILKCGLDCEVFVG 214

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y++   +V A           N    A++              VF+EM   G++
Sbjct: 215 NALITMYSRCCRLVEARR--------GNSGLEAIL--------------VFLEMLKEGMK 252

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           L+  S T  + A    KE   G QIH   VK+G+ + V   + N +++ Y +C    DA 
Sbjct: 253 LDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHV--KVCNVLISTYSKCEDIEDAK 310

Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            +F+ I + +VVSW+  I+ + +  +A  LF ++R +    N+ T + L+ ++  + ++ 
Sbjct: 311 LVFESIIDRNVVSWTTMISISEE--DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVE 368

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+ I   C K  F+  +++ N+LI+MY K   ++D+  +F+ L +++ +SWNS+I+GY+
Sbjct: 369 EGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYA 428

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKSGFLLD 411
           +NG + +AL  F   L  S  PN +T  S+L ++++++  S++   + HSHI+K G   +
Sbjct: 429 QNGLWQEALQTFLSALMESR-PNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTN 487

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
             + S L+  Y K  ++ ES  V SE   KN V   A+ S       +   + L++ +  
Sbjct: 488 PIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMER 547

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDMYCK 525
              + +  TF  V+ AC     ++ G  +    +K     D  +E      S+++DM  +
Sbjct: 548 EGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVK-----DHLIEPSPEHYSSMVDMLGR 602

Query: 526 CGTIEDAK 533
            G +++A+
Sbjct: 603 AGRLKEAE 610



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 10/262 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ + +K     +  +S +LI+ + KF     + +   +   R+II++N+LISG A+   
Sbjct: 373 IHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGL 432

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV-----CLKLGFSSRVYLV 116
              AL+ F     +  RP+ FTF S++ +  S +   + HG       LKLG ++   + 
Sbjct: 433 WQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVS 491

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ YAK G I  +   F +    + VA+TA++  +  +G+++    +F +M   G++
Sbjct: 492 SALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVK 551

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  +  AV+   G    V  G Q+    VK   +     H  ++++++  R G+  +A 
Sbjct: 552 PDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHY-SSMVDMLGRAGRLKEAE 610

Query: 234 KMFDEITEPDVVSWSERIAAAC 255
           +   +I     +S  + +  AC
Sbjct: 611 EFVGQIPGGAGLSVLQSLLGAC 632


>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 231/770 (30%), Positives = 383/770 (49%), Gaps = 91/770 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRA--FRFLFDT-QNRDIITYNALISGLA 57
           +++S +I   H        T  S  T FA   R    R LFD    R+++++N +I+G  
Sbjct: 38  RVFSNVIHKNH-------ATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL 90

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQE-NEIVHGVCLKLGFSSR 112
                  A KLFD +  +    D F+++ ++  C    G L++  E+   V  KL  +  
Sbjct: 91  HNNMVEEAHKLFDLMAER----DNFSWALMI-TCYTRKGMLEKARELFELVPDKLDTACW 145

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR- 171
             +++G    YAK G    AE  F      D V+Y +M+ GY  NG+   + + F  M  
Sbjct: 146 NAMIAG----YAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAE 201

Query: 172 ----SLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
               S  L +  F     LG+++++   E+I      V +++ +C          + R G
Sbjct: 202 RNVVSWNLMVAGFVNNCDLGSAWEL--FEKIPDPNA-VSWVTMLCG---------FARHG 249

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS 284
           + ++A K+FD +   +VVSW+  IAA    +   EA  LFK+  + D  ++  TMIN   
Sbjct: 250 KIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDC-VSWTTMINGYV 308

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
            VG  ++  A +      YK      V+   AL+S   + G++++A  +F  L  +D++ 
Sbjct: 309 RVG--KLDEAREVYNQMPYKD-----VAAKTALMSGLIQNGRIDEASQVFSQLNKRDAIC 361

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WNSMIAGY ++G  ++AL++F  M                  V N+ S            
Sbjct: 362 WNSMIAGYCQSGRMSEALNLFRQM-----------------PVKNAVSW----------- 393

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
                      + +I+ Y +   ++ +  +   +  +N +  N+L +  +    + +AL+
Sbjct: 394 -----------NTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
               +    ++ + STF+  L +CA +  L+ GK +H L LK+ Y  D+FV +A+I MY 
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYA 502

Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
           KCG ++ A++ F+ I    L  WN+++ GYA +G  +E    F +MS  G  PDE+T++ 
Sbjct: 503 KCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIG 562

Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +L++C HAGL  +      CM +   + P  EHY+C+VDLLGR+G LE A   +  M + 
Sbjct: 563 MLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVK 622

Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
            +A +W SLL+AC ++ N++LG +A  +LLEL+P N S Y+ LSN++A AG W DV +LR
Sbjct: 623 ANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLR 682

Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             M+E+   K PG SWI V     +F + D    +++ I   L  L  HM
Sbjct: 683 VLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHM 732



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 13/168 (7%)

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
           +++F ++  I    K G I++AKR F  +   + A +N+M+  +A++G   +   LF+KM
Sbjct: 15  KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
           S+  +    +++  ++    H  +V EA      M++          +A ++    R G+
Sbjct: 75  SQRNL----VSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF-----SWALMITCYTRKGM 125

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQP 678
           LE A+   + +P   D   W ++++     G  D       K+ E  P
Sbjct: 126 LEKARELFELVPDKLDTACWNAMIAGYAKKGRFD----DAEKVFEKMP 169



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/363 (18%), Positives = 150/363 (41%), Gaps = 84/363 (23%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  I   GK G++++A+ +F  +I K+  ++NSM+  +++NG  + A  +F  M + +L+
Sbjct: 21  NKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLV 80

Query: 375 P-----NGYTMASILEA-------VSNSKSLKQAMQVHSHIIKSGFL------------- 409
                  GY   +++E        ++   +   A+ +  +  + G L             
Sbjct: 81  SWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCY-TRKGMLEKARELFELVPDK 139

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
           LD +  + +I  Y K    +++++V  ++  K+ V  N++ +          A++ +  +
Sbjct: 140 LDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERM 199

Query: 470 -------W-------------GSCREV-------NGSTFSIVLKACAAMTDLEQGK---- 498
                  W             GS  E+       N  ++  +L   A    + + +    
Sbjct: 200 AERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFD 259

Query: 499 ------AIHCLALKARYDQDIFVESAV-----------------IDMYCKCGTIEDAKRA 535
                  +   A+ A Y QD+ ++ AV                 I+ Y + G +++A+  
Sbjct: 260 RMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREV 319

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           + ++    +A   A+M G  Q+G   E S +F++++    K D I + +++   C +G +
Sbjct: 320 YNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLN----KRDAICWNSMIAGYCQSGRM 375

Query: 596 REA 598
            EA
Sbjct: 376 SEA 378


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/493 (35%), Positives = 270/493 (54%), Gaps = 7/493 (1%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           + +T  +LL         + GK +     K      + I   L++MY  CG +  AR +F
Sbjct: 78  DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           + +  ++ V W SMI+GY +N   N+AL ++  M E    P+  TMA+++ A +  K L 
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
             M++HSHI +    +   + S L+  Y KC  L  +++V  ++  K+    +AL    V
Sbjct: 198 VGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYV 257

Query: 455 YASCHAEALELYRTI-WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
             +   EAL+L+R +  GS    N  T   V+ ACA + DLE G+ +H    + +    +
Sbjct: 258 KNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSV 317

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            + +++IDM+ KCG I+ AKR F  +    L  WN+M+ G A HG   E    F+ M   
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTT 377

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            ++PDEIT++ VLT+C HAGLV+E +     +  L+G+  + EHY C+VDLL R GLL  
Sbjct: 378 DLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAE 437

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           A+  I  MP+ PD  IW S+L AC +Y N++LG  A   LLEL+P N+  Y+LLSN+YA 
Sbjct: 438 AREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYAR 497

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI------YKEL 747
             MWN+V K+R+ M EK + K PG S + +    H F AGD SH +  EI       +E 
Sbjct: 498 RKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREK 557

Query: 748 IKLYEHMVATAKL 760
           +KL  ++  T+++
Sbjct: 558 LKLVGYVADTSEV 570



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 237/511 (46%), Gaps = 60/511 (11%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNR--DIITYNALISGLARFCQSGPALKLF 69
           H  P L+  LI+H          + +      R  D++T+N+++           AL+ +
Sbjct: 8   HHKPSLNK-LIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSY 66

Query: 70  DRLRYQGLR-PDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
             +  +    PD FTF SL+K C  L E    +++HG  +K    S +Y+ +  +  YA 
Sbjct: 67  TEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAA 126

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G++ SA   F      + V +T+M+ GY+ N   +++  ++ +M   G   +E ++  +
Sbjct: 127 CGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186

Query: 186 LGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           + A  ++K+   G ++H    ++     +C  L +A++N+Y +CG    A ++FD++++ 
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDM--KICAVLGSALVNMYAKCGDLKTARQVFDQLSDK 244

Query: 243 DVVSWSERIAAACDG---VEAFGLFKDLR-FNDFQINEYTMINLLSSVGGERILRAGKQI 298
           DV +WS  I          EA  LF+++   ++ + NE T++ ++S+      L  G+ +
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWV 304

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
             +  +      VS+ N+LI M+ KCG ++ A+ IFD + +KD +SWNSM+ G + +G  
Sbjct: 305 HDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLG 364

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +AL  F  M    L P+  T   +L A S           H+ +++ G           
Sbjct: 365 REALAQFHLMQTTDLQPDEITFIGVLTACS-----------HAGLVQEG----------- 402

Query: 419 ITTYGKCNALNESKRVLSEID-----KKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
                        K++  EI+     +  + H   +  +L  A   AEA E  R +    
Sbjct: 403 -------------KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM---P 446

Query: 474 REVNGSTFSIVLKACAAMTDLEQG-KAIHCL 503
            + +G+ +  +L AC    +LE G +A  CL
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARCL 477



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 206/423 (48%), Gaps = 18/423 (4%)

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLGLELNEFSLTAVLGAS---FDVKEGE 196
           LD + + +M+  +V +    ++ + + EM  RS  +  + F+  ++L       + K G+
Sbjct: 41  LDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVP-DRFTFPSLLKGCALLLEFKVGK 99

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--- 253
            +HG  VK    S +  ++   ++N+Y  CG    A  +F+ +   + V W+  I+    
Sbjct: 100 VLHGQVVKYMLHSDL--YIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMK 157

Query: 254 -ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
             C   EA  L+K +  + F  +E TM  L+S+    + L  G ++ +   ++       
Sbjct: 158 NHCPN-EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           +G+AL++MY KCG +  AR +FD L  KD  +W+++I GY +N    +AL +F  +   S
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276

Query: 373 -LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + PN  T+ +++ A +    L+    VH +I ++      S+ + LI  + KC  ++ +
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
           KR+   +  K+ +  N++ + L       EAL  +  +  +  + +  TF  VL AC+  
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHA 396

Query: 492 TDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWN 548
             +++GK +    ++A Y   +  E    ++D+ C+ G + +A+   R +  +   A W 
Sbjct: 397 GLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWG 455

Query: 549 AMM 551
           +M+
Sbjct: 456 SML 458



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 193/414 (46%), Gaps = 17/414 (4%)

Query: 305 VGFMEVVSIGNALISMYGKCGQ--VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQAL 362
            GF+      N LI+     G   V  A S+F +    D ++WNSM+  +  +    +AL
Sbjct: 4   TGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRAL 63

Query: 363 DMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
             +  MLE S  +P+ +T  S+L+  +     K    +H  ++K     D  + + L+  
Sbjct: 64  QSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNM 123

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           Y  C  L  ++ +   +  +N V   ++ S  +   C  EAL LY+ +       +  T 
Sbjct: 124 YAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTM 183

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
           + ++ ACA + DL  G  +H    +        + SA+++MY KCG ++ A++ F ++  
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSD 243

Query: 542 DSLAGWNAMMMGYAQHGCYHEVSNLFNKMS-KFGVKPDEITYLAVLTSCCHAGLVREAR- 599
             +  W+A++ GY ++    E   LF +++    ++P+E+T LAV+++C   G +   R 
Sbjct: 244 KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRW 303

Query: 600 --TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
              Y++     H +         ++D+  + G ++ AK   D M    D   W S+++  
Sbjct: 304 VHDYITRTQKGHSVSLN----NSLIDMFSKCGDIDAAKRIFDSMSY-KDLISWNSMVNGL 358

Query: 658 TIYGNIDLGLLAGSKLLE---LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            ++G +    LA   L++   LQPD E T++ +    + AG+  +  KL  E++
Sbjct: 359 ALHG-LGREALAQFHLMQTTDLQPD-EITFIGVLTACSHAGLVQEGKKLFYEIE 410



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 180/370 (48%), Gaps = 30/370 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFC 60
           ++  ++K   H D  + TTL++ +    D + A RFLF+   +R+ + + ++ISG  +  
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA-RFLFERMGHRNKVVWTSMISGYMKNH 159

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSR-------V 113
               AL L+ ++   G  PD  T ++LV AC  L++     GV +KL    R        
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKD----LGVGMKLHSHIREMDMKICA 215

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-S 172
            L S  +  YAK G++ +A   F    D D  A++A++ GYV N    ++ ++F E+   
Sbjct: 216 VLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGG 275

Query: 173 LGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
             +  NE ++ AV+ A     D++ G  +H +  +     G    LNN++++++ +CG  
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQ--KGHSVSLNNSLIDMFSKCGDI 333

Query: 230 LDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
             A ++FD ++  D++SW+  +   A    G EA   F  ++  D Q +E T I +L++ 
Sbjct: 334 DAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTAC 393

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNA----LISMYGKCGQVNDARSIFDYLIFK-D 341
               +++ GK++    Y++  +  V + +     ++ +  + G + +AR     +  + D
Sbjct: 394 SHAGLVQEGKKL---FYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450

Query: 342 SVSWNSMIAG 351
              W SM+  
Sbjct: 451 GAIWGSMLGA 460


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 315/581 (54%), Gaps = 10/581 (1%)

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           FS  +  G    V+ G + H F VK+G  S   VC  L    +++Y +CG+   AV+++D
Sbjct: 117 FSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSL----IDMYAKCGEVDSAVRVYD 172

Query: 238 EITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++T  D  + +  I+A A +G  V+AF +F  +     + N YT   +L+  G    ++ 
Sbjct: 173 KMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE 232

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+ A   K+ ++   ++GNAL+++Y KCG + +A  +F+ L  ++ +SW + I G+ +
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQ 292

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           +G F +AL  F  M E  + PN +T + +L +    K        H+ +IK G      +
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFV 352

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNA-VHINALASVLVYASCHAEALELYRTIWGSC 473
            + +I  Y     ++E+++   ++ +  + V  NAL +  V      +A+E +  +    
Sbjct: 353 GTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKED 412

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
              N  T+S + KAC++   L     IH   +K+  + ++ V S++I+ Y +CG++E+A 
Sbjct: 413 VACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAV 472

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           + F +I    +  WN+++  Y+Q+G   +   L  KM + G KP   T+L VL++C H+G
Sbjct: 473 QVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSG 532

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV+E + +   M   + + P+  H +C+VD+LGR G LE A   I ++ + P A IW+ L
Sbjct: 533 LVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPL 592

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L+AC    N+ +      K+L+L+P++ + YV LSN+YA  G W D    R+ M++K + 
Sbjct: 593 LAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEIS 652

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           KEPG SWI V    + F++ D +H +  ++Y++L +L   +
Sbjct: 653 KEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQI 693



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 169/535 (31%), Positives = 268/535 (50%), Gaps = 46/535 (8%)

Query: 195  GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
            G  +H   V +G       +    +M+ Y  CGQ  +A K+FD+I   ++  W   +  A
Sbjct: 822  GRALHAHLVIIGL--ARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWI-VLTGA 878

Query: 255  CDGV----EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            C       EA   F +++    + N++ + ++L + G     R G+ +     K  F   
Sbjct: 879  CARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD 938

Query: 311  VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
              I +ALI MY KCG V  A  +FD+++ KD V  N+M++GY+++GF ++ALB+   M +
Sbjct: 939  AYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQ 998

Query: 371  FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD----DSMISCLITTYGKCN 426
              + PN  +  +++   S         +V   +  +G   D     S+IS  +  +    
Sbjct: 999  AGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHE 1058

Query: 427  ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
              +  K +L +                                 G C   +  T S +L 
Sbjct: 1059 GFDAFKEMLDQ---------------------------------GFCP--SSVTISSLLP 1083

Query: 487  ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
            AC  + +L  GK IH  A+    ++D++V SA++DMY KCG I +AK  F  +   +   
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143

Query: 547  WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
            WN+++ GYA HG  +E   LFN+M +   K D +T+ AVL +C HAG+V    +    M 
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203

Query: 607  DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
            + + + P+LEHYAC+VDLLGR G L  A   I  MP+ PD  +W +LL AC  +GNI+L 
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263

Query: 667  LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
             +A   L EL+P++  + +LLSNLYA AG W +  K++K MK++   K PG SWI
Sbjct: 1264 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 146/611 (23%), Positives = 267/611 (43%), Gaps = 63/611 (10%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR---FCQ 61
            ++K G   D  + T+LI  + K  +   A R      + D  T N LIS  AR   F Q
Sbjct: 138 FVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQ 197

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              A ++F ++   G RP+ +T+S+++  CG++   QE + +H   +K+ + S   + + 
Sbjct: 198 ---AFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNA 254

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  Y+K G +  AE+ F      + +++TA + G+  +G+F K+ + F  MR  G+E N
Sbjct: 255 LLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPN 314

Query: 179 EFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           EF+ + VL   G   D  +G   H   +K G  SGV   +  AI+++Y   G+  +A K 
Sbjct: 315 EFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGV--FVGTAIIDMYSGLGEMDEAEKQ 372

Query: 236 FDEITE-PDVVSWSERIAAAC--DGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           F ++      VSW+  IA     + +E A   F  +   D   NE+T  N+  +      
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPS 432

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L    QI +   K      + + ++LI  Y +CG + +A  +F  +   D VSWNS+I  
Sbjct: 433 LATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKA 492

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLL 410
           YS+NG   +A+ +   M+E    P   T  ++L A S+S  +++  +    +++      
Sbjct: 493 YSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQP 552

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           +++  SC++   G+   L  +   + ++  K    I                   +R + 
Sbjct: 553 EETHCSCMVDILGRAGQLENALDFIKKLTMKPTASI-------------------WRPLL 593

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            +CR    S   +       + DLE              D  ++V   + +MY + G   
Sbjct: 594 AACR--YNSNLQMAEYVAEKILDLEPN------------DATVYV--TLSNMYAEVGRWA 637

Query: 531 DAKRAFR-----KICRDSLAGW----NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           DA+   R     +I ++    W    N M   ++    + E+  ++ K+ +   +  +I 
Sbjct: 638 DAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIG 697

Query: 582 YLAVLTSCCHA 592
           Y    T+  H 
Sbjct: 698 YSPPTTTVLHP 708



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 217/467 (46%), Gaps = 35/467 (7%)

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC-----DGVEAFGLF-----KDLRFNDFQINEYTMI 280
           +A  +F++  +   VS +E   + C     +GV+  G F       + F     +   + 
Sbjct: 58  NACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQYVF 117

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           + LS  G E  +  G++   F  K+G      +  +LI MY KCG+V+ A  ++D +   
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D+ + N +I+ Y+ NGFF QA  +F  +      PN YT +++L       ++++  Q+H
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +H++K  +L + ++ + L+T Y KC  + E++ V   + ++N +   A  +         
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL+ +  +  S  E N  TFSIVL +C  + D   G+  H   +K      +FV +A+I
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357

Query: 521 DMYCKCGTIEDAKRAFRKICR-DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           DMY   G +++A++ F+++ R  S   WNA++ GY  +    +    F +M K  V  +E
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNE 417

Query: 580 ITYLAVLTSCC-----------HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
            TY  +  +C            H+ L++      +  S+LH     +E Y        + 
Sbjct: 418 FTYSNIFKACSSFPSLATTVQIHSRLIKS-----NVESNLHVASSLIEAYT-------QC 465

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           G LE A     Q+    D   W S++ A +  G+    +    K++E
Sbjct: 466 GSLENAVQVFTQIS-DADVVSWNSIIKAYSQNGDPWKAIFLLRKMIE 511



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 204/436 (46%), Gaps = 43/436 (9%)

Query: 17   LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
             +  L+S +T+      A +      N +I  +  L    AR      AL  F  ++ +G
Sbjct: 840  FAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEG 899

Query: 77   LRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            LRP+ F   S++KACG L +    E +H V LK  F S  Y++S  I  Y+K G +  A 
Sbjct: 900  LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKAC 959

Query: 134  MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
              F   +D D V   AMV GY  +G   ++ ++  +M+  G++ N  S   +        
Sbjct: 960  RVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTL-------- 1011

Query: 194  EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
                I GF  +VG  S V     + +  L    G             EPDVVSW+  I+ 
Sbjct: 1012 ----IAGFS-QVGDKSMV-----SEVFRLMTANG------------VEPDVVSWTSVISG 1049

Query: 254  ACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                    E F  FK++    F  +  T+ +LL +      LR GK+I  +   +G  + 
Sbjct: 1050 FVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKD 1109

Query: 311  VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
            V + +AL+ MY KCG +++A+ +F  +  +++V+WNS+I GY+ +G+ N+A+++F  M E
Sbjct: 1110 VYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEE 1169

Query: 371  FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNAL 428
                 +  T  ++L A S++  ++    +    ++  + ++  +   +C++   G+   L
Sbjct: 1170 SDTKLDHLTFTAVLNACSHAGMVELGESLFXK-MQEKYRIEPRLEHYACMVDLLGRAGKL 1228

Query: 429  NES----KRVLSEIDK 440
            +E+    K +  E DK
Sbjct: 1229 SEAYDLIKAMPVEPDK 1244



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 190/394 (48%), Gaps = 20/394 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K  +  +  +   L++ ++K      A       + R+II++ A I+G  +  
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHG 294

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
               ALK F  +R  G+ P+ FTFS ++ +CG ++   +  + H   +K G +S V++ +
Sbjct: 295 DFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGT 354

Query: 118 GFIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I+ Y+  GE+  AE  F+       NV++ A++ GYV N + +K+ E F  M    + 
Sbjct: 355 AIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVA 414

Query: 177 LNEFSLTAVLGA--SF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NEF+ + +  A  SF  +    QIH   +K    S +  H+ ++++  Y +CG   +AV
Sbjct: 415 CNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNL--HVASSLIEAYTQCGSLENAV 472

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F +I++ DVVSW+  I A     D  +A  L + +     +    T + +LS+     
Sbjct: 473 QVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSG 532

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSM 348
           +++ G++  ++           +  + ++ + G+ GQ+ +A      L  K + S W  +
Sbjct: 533 LVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPL 592

Query: 349 IAGYSENGFFNQALDMFCHMLE--FSLIPNGYTM 380
           +A       +N  L M  ++ E    L PN  T+
Sbjct: 593 LAACR----YNSNLQMAEYVAEKILDLEPNDATV 622



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 8/293 (2%)

Query: 379  TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            T A  ++  +  ++L +   +H+H++  G        + L++ Y +C  L+ ++++  +I
Sbjct: 805  TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864

Query: 439  DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
               N      L         + EAL  +  +       N      +LKAC  ++D   G+
Sbjct: 865  PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924

Query: 499  AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
             +H + LK  ++ D ++ SA+I MY KCG +E A R F  I    L   NAM+ GYAQHG
Sbjct: 925  NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984

Query: 559  CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHY 618
              HE  BL  KM + GVKP+ +++  ++      G           M+  +G+ P +  +
Sbjct: 985  FVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMT-ANGVEPDVVSW 1043

Query: 619  ACIV-----DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
              ++     +     G  +  K  +DQ   P    I  SLL ACT   N+  G
Sbjct: 1044 TSVISGFVQNFHNHEG-FDAFKEMLDQGFCPSSVTI-SSLLPACTNVANLRHG 1094



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/447 (21%), Positives = 188/447 (42%), Gaps = 46/447 (10%)

Query: 272  FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            FQ +  T    +     +R L  G+ + A    +G   +      L+S Y +CGQ+++AR
Sbjct: 799  FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNAR 858

Query: 332  SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
             +FD +   +   W  +    +  GF+ +AL  F  M +  L PN + + SIL+A  +  
Sbjct: 859  KLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLS 918

Query: 392  SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
              +    +H+ I+K+ F  D  +IS LI  Y KC  + ++ RV   I  K+ V +NA+ S
Sbjct: 919  DRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVS 978

Query: 452  VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                     EAL+L + +  +  + N  +++ ++   + + D      +  L      + 
Sbjct: 979  GYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEP 1038

Query: 512  DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
            D+                                 W +++ G+ Q+   HE  + F +M 
Sbjct: 1039 DV-------------------------------VSWTSVISGFVQNFHNHEGFDAFKEML 1067

Query: 572  KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG--LIPQLEH----YACIVDLL 625
              G  P  +T  ++L +C +   +R  +       ++HG  ++  +E      + +VD+ 
Sbjct: 1068 DQGFCPSSVTISSLLPACTNVANLRHGK-------EIHGYAMVIGVEKDVYVRSALVDMY 1120

Query: 626  GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD-NESTY 684
             + G +  AK+    MP   +   W SL+     +G  +  +   +++ E     +  T+
Sbjct: 1121 AKCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTF 1179

Query: 685  VLLSNLYASAGMWNDVGKLRKEMKEKF 711
              + N  + AGM      L  +M+EK+
Sbjct: 1180 TAVLNACSHAGMVELGESLFXKMQEKY 1206



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/378 (19%), Positives = 173/378 (45%), Gaps = 38/378 (10%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++++++KN    D  + + LI  ++K     +A R      ++D++  NA++SG A+   
Sbjct: 926  MHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGF 985

Query: 62   SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
               AL L  +++  G++P+  ++++L+     + +  +V  V        R+   +G   
Sbjct: 986  VHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVF-------RLMTANG--- 1035

Query: 122  NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
                              ++ D V++T+++ G+V N    +  + F EM   G   +  +
Sbjct: 1036 ------------------VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVT 1077

Query: 182  LTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
            ++++L A  +V   + G++IHG+ + +G    V  ++ +A++++Y +CG   +A  +F  
Sbjct: 1078 ISSLLPACTNVANLRHGKEIHGYAMVIGVEKDV--YVRSALVDMYAKCGYISEAKILFYM 1135

Query: 239  ITEPDVVSWSERI-AAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
            + E + V+W+  I   A  G   EA  LF  +  +D +++  T   +L++     ++  G
Sbjct: 1136 MPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELG 1195

Query: 296  KQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYS 353
            + +      K      +     ++ + G+ G++++A  +   + +  D   W +++    
Sbjct: 1196 ESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACR 1255

Query: 354  ENGFFNQALDMFCHMLEF 371
             +G    A     H+ E 
Sbjct: 1256 NHGNIELAEVAAEHLFEL 1273


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 221/764 (28%), Positives = 367/764 (48%), Gaps = 92/764 (12%)

Query: 71  RLRYQGLRPDAFTFSSLVKA---CGSLQE------NEIVHGVCLKLGFSSRVYLVSGFIE 121
           RL   GL    F  ++L+ A   CG+L +       +I H           V   +  + 
Sbjct: 29  RLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAH---------PNVITHNVMLN 79

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEF 180
            Y K G +  A   F      D  ++  ++ GY  + ++  S E FV M RS     N F
Sbjct: 80  GYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAF 139

Query: 181 SLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ--------- 228
           +    +   GA  +     Q+ G   K G  S   + +  A+++++VRCG          
Sbjct: 140 TFAYAMKSCGALGERSLALQLLGMVQKFG--SQDDSDVAAALVDMFVRCGTVDLASRLFV 197

Query: 229 ---------------------KLD-AVKMFDEITEPDVVSWSERIAAACDG---VEAFGL 263
                                 +D A+++FD + E DVVSW+  ++A        EA  +
Sbjct: 198 RIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDM 257

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
             D++    +++  T  + L++      LR GKQ+ A   +        + +AL+ +Y K
Sbjct: 258 VVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAK 317

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           CG   +A+ +F+ L  +++V+W  +IAG+ ++G F +++++F  M    +  + + +A++
Sbjct: 318 CGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATL 377

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK---RVLSEID- 439
           +    +   L    Q+HS  +KSG +    + + LI+ Y KC+ L  ++   R ++E D 
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDI 437

Query: 440 ---------------------------KKNAVHINALASVLVYASCHAEALELYRTIWGS 472
                                       KN +  NA+    +      + L +Y  +  S
Sbjct: 438 VSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVML-S 496

Query: 473 CREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
            ++V     T+  + K CA +   + G  I    +K     D  V +AVI MY KCG I 
Sbjct: 497 EKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRIL 556

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A++ F  +    +  WNAM+ GY+QHG   +   +F+ + K G KPD I+Y+AVL+ C 
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+GLV+E ++Y   M  +H + P LEH++C+VDLLGR G L  AK  ID+MP+ P A +W
Sbjct: 617 HSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVW 676

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LLSAC I+GN +L  LA   + EL   +  +Y+L++ +YA AG  +D  ++RK M++K
Sbjct: 677 GALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK 736

Query: 711 FLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            + K PGYSW+ V    H F A D SH Q   I K+L +L E +
Sbjct: 737 GIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKI 780



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 154/679 (22%), Positives = 299/679 (44%), Gaps = 80/679 (11%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           LL+ +  H + I    +++ + K      A         RD+ ++N L+SG  +  Q   
Sbjct: 61  LLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLA 120

Query: 65  ALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFI 120
           +L+ F  +   G   P+AFTF+  +K+CG+L E  +   + G+  K G      + +  +
Sbjct: 121 SLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALV 180

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV----------------------WN- 157
           + + + G +  A   F    +       +M+ GYV                      WN 
Sbjct: 181 DMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNM 240

Query: 158 --------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVG 206
                   G   ++ ++ V+M+S G+ L+  + T+ L A      ++ G+Q+H   ++  
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-- 298

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGL 263
            L  +  ++ +A++ LY +CG   +A  +F+ + + + V+W+  IA         E+  L
Sbjct: 299 NLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVEL 358

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           F  +R     ++++ +  L+S       L  G+Q+ + C K G ++ V + N+LISMY K
Sbjct: 359 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 418

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG-------FFN----------------- 359
           C  +  A SIF ++  KD VSW SMI  +S+ G       FF+                 
Sbjct: 419 CDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAY 478

Query: 360 -------QALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
                    L M+  ML E  + P+  T  ++ +  ++  + K   Q+    +K G +LD
Sbjct: 479 IQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILD 538

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
            S+ + +IT Y KC  + E+++V   ++ K+ V  NA+ +         +A+E++  I  
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 598

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTI 529
              + +  ++  VL  C+    +++GK+   + +K  ++    +E  S ++D+  + G +
Sbjct: 599 RGAKPDYISYVAVLSGCSHSGLVQEGKSYFDM-MKRVHNISPGLEHFSCMVDLLGRAGHL 657

Query: 530 EDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
            +AK    ++     A  W A++     HG  +E++ L  K       PD  +Y+ +   
Sbjct: 658 TEAKDLIDEMPMKPTAEVWGALLSACKIHG-NNELAELAAKHVFELDSPDSGSYMLMAKI 716

Query: 589 CCHAGLVREARTYLSCMSD 607
              AG   ++      M D
Sbjct: 717 YADAGKSDDSAQIRKLMRD 735



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 185/405 (45%), Gaps = 57/405 (14%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I+N   +DP +++ L+  + K   F+ A        +R+ + +  LI+G   F 
Sbjct: 291 QLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG---FL 347

Query: 61  QSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
           Q G    +++LF+++R + +  D F  ++L+  C S  +      +H +CLK G    V 
Sbjct: 348 QHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVV 407

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL- 173
           + +  I  YAK   + SAE  FR   + D V++T+M+  +   G   K++E F  M +  
Sbjct: 408 VSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKN 467

Query: 174 --------------GLELNEFSLTAVLGASFDVKE--------------------GEQIH 199
                         G E +   +  V+ +  DV+                     G+QI 
Sbjct: 468 VITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQII 527

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD--- 256
           G  VKVG +  +   + NA++ +Y +CG+ L+A K+FD +   D+VSW+  I        
Sbjct: 528 GRTVKVGLI--LDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGM 585

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG-- 314
           G +A  +F D+     + +  + + +LS      +++ GK       +V     +S G  
Sbjct: 586 GKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRV---HNISPGLE 642

Query: 315 --NALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENG 356
             + ++ + G+ G + +A+ + D +  K +   W ++++    +G
Sbjct: 643 HFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHG 687


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/563 (32%), Positives = 292/563 (51%), Gaps = 36/563 (6%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQI-NEYTMINLLSSVG 287
           A K+FD+I  P++ +W+  I   A++   ++   +F  +     +  N YT   ++ +  
Sbjct: 83  ACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L AG+ I     K  F   + I N+LI  Y   G ++ A  +F  ++ KD VSWNS
Sbjct: 143 EVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNS 202

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           MI+G+ + G   +AL +F  M   +  PN  TM  +L A +    L+       +I ++G
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI--------------------- 446
             ++  + + ++  Y KC +L +++R+  ++++K+ V                       
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322

Query: 447 ----------NALASVLVYASCHAEALELYRTI-WGSCREVNGSTFSIVLKACAAMTDLE 495
                     NAL S         EAL ++R +      + N  T +  L ACA +  ++
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMD 382

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            G  IH    K     +  + +++IDMY KCG +E A   F  + R  +  W+AM+ G A
Sbjct: 383 LGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLA 442

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG      +LF+KM +  VKP+ +T+  +L +C H+GLV E R + + M  ++G++P  
Sbjct: 443 MHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGS 502

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           +HYAC+VD+LGR G LE A   I++MPI P A +W +LL AC IYGN++L  +A S+LLE
Sbjct: 503 KHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLE 562

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
              +N   YVLLSN+YA AG W+ V +LR+ MK   L KEPG S I V G  H F  GD+
Sbjct: 563 TDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDN 622

Query: 736 SHSQSKEIYKELIKLYEHMVATA 758
           SH  S EIY +L ++   + +T 
Sbjct: 623 SHPLSTEIYSKLDEIVARIKSTG 645



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 226/487 (46%), Gaps = 55/487 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q+++ +++ G   DP  +T L +    +  +    A +        ++ T+N LI   A 
Sbjct: 48  QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFAS 107

Query: 59  FCQSGPALKLFDRLRYQGLR-PDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
             +    L +F ++ ++  R P+++TF  ++KA     SL   + +HG+ +K  F S ++
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLF 167

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  I  Y+  G++ SA + F   ++ D V++ +M+ G+V  G  +++ ++F  M+   
Sbjct: 168 ISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMEN 227

Query: 175 LELNEFSLTAVLGA---SFDVKEG----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
              N  ++  VL A     D++ G    + I   G+ +  +      L+NA++++YV+CG
Sbjct: 228 ARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLI------LSNAMLDMYVKCG 281

Query: 228 QKLDAVKMFDEITEPDVVSWSERI---AAACD---------------------------- 256
              DA ++FD++ E D+VSW+  I   A   D                            
Sbjct: 282 SLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQ 341

Query: 257 ---GVEAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                EA  +F++L+ N + + NE T+ + L++      +  G  I  +  K G      
Sbjct: 342 NGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFH 401

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           I  +LI MY KCG +  A  +F  +  +D   W++MIAG + +G    A+D+F  M E  
Sbjct: 402 ITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETK 461

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNES 431
           + PN  T  ++L A S+S  + +     + +    G +      +C++   G+   L E+
Sbjct: 462 VKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEA 521

Query: 432 KRVLSEI 438
             ++ ++
Sbjct: 522 VELIEKM 528



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 147/314 (46%), Gaps = 18/314 (5%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT--TYGKCNALNESKR 433
           N  T+  +++  +N K LKQ   +H+H++++G   D    + L T       ++L+ + +
Sbjct: 29  NPSTVPILIDKCANKKHLKQ---LHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACK 85

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMT 492
           V  +I + N    N L      +    + L ++ + +  S R  N  TF  V+KA   ++
Sbjct: 86  VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            L  G+AIH + +KA +  D+F+ +++I  Y   G ++ A   F KI    +  WN+M+ 
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA---GLVREARTYLSCMSDLH 609
           G+ Q G   E   LF +M     +P+ +T + VL++C         R A  Y+    + +
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI----ERN 261

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
           G+   L     ++D+  + G LE A+   D+M    D   W +++      G+ D    A
Sbjct: 262 GIDINLILSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTMIDGYAKVGDYD----A 316

Query: 670 GSKLLELQPDNEST 683
             ++ ++ P  + T
Sbjct: 317 ARRVFDVMPREDIT 330


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 201/704 (28%), Positives = 357/704 (50%), Gaps = 12/704 (1%)

Query: 48  TYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKL 107
           ++N+L+S L+        L+ +  ++    + DA+TF SL KAC +L  N   HG+ L  
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNL--NLFSHGLSLHQ 73

Query: 108 -----GFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
                G S   Y+ S  I  YAK G I      F   L  + V +T ++  Y   G+ D 
Sbjct: 74  SVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDI 133

Query: 163 SKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +  +F +MR  G++    +L ++L     +     +H   +  GF S +   L+N+++N+
Sbjct: 134 AFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLA--LSNSMVNM 191

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y +CG+  DA ++F  I   D+VSW+  ++A        E   L + ++  D + ++ T 
Sbjct: 192 YGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            + LS+   +  LR GK +     K G      + +AL+ +Y +C  ++ A  +F     
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD V W +MI+G  +N   ++AL +F  M+E ++ P+  T+AS L A +          +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H ++++ G +LD    + L+T Y KCN L +S  + +++ +K+ V  NA+ +        
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           ++ +  +  +  S    +  T + +L+AC +   L QGK IH   L++     I  E+A+
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           +DMY KCG +E+A++ F  + +  L  W+ +++GY  +G        +++    G++P+ 
Sbjct: 492 VDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           + +++VL++C H GL+ +  +    M+    + P LEH AC+VDLL R G ++ A     
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
            M   P   +   LL AC + G ++LG +    + EL+P +   +V L+N YAS   W+ 
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDG 671

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           V K   +M+   L K PG+S I V G T  F+A  +SH + ++I
Sbjct: 672 VEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNSHPKIEKI 715



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 271/551 (49%), Gaps = 15/551 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFC 60
           ++  ++ NG   D  + ++LIS + KF       R +FDT   R+++ +  +I   +R  
Sbjct: 71  LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLG-RKVFDTMLKRNVVPWTTIIGSYSREG 129

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
               A  +F ++R  G++P + T  SL+     L     +H + +  GF S + L +  +
Sbjct: 130 DIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMV 189

Query: 121 ENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
             Y K G I  A   F+  DC D+  V++ +++  Y   G  ++  ++   M+   ++ +
Sbjct: 190 NMYGKCGRIADARRLFQSIDCRDI--VSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPD 247

Query: 179 EFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + +  + L AS    D++ G+ +HG  +K G    +  H+ +A++ LY+RC     A K+
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGL--NIDQHVESALVVLYLRCRCLDPAYKV 305

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F   TE DVV W+  I+         +A G+F  +  ++ + +  T+ + L++       
Sbjct: 306 FKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCC 365

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G  I  +  + G M  +   N+L++MY KC ++  + SIF+ ++ KD VSWN+++AG+
Sbjct: 366 DIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGH 425

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
           ++NG+ ++ +  F  M +  L P+  T+ S+L+A  ++ +L Q   +H+ +++S  +   
Sbjct: 426 AKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCI 485

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
              + L+  Y KC  L  +++    + +++ V  + L     +      AL  Y    G+
Sbjct: 486 MTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGT 545

Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIH-CLALKARYDQDIFVESAVIDMYCKCGTIED 531
             E N   F  VL AC+    + +G +I+  +    R   ++   + V+D+  + G +++
Sbjct: 546 GMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDE 605

Query: 532 AKRAFRKICRD 542
           A   ++ + ++
Sbjct: 606 AYSFYKMMFKE 616


>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
 gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 187/588 (31%), Positives = 299/588 (50%), Gaps = 11/588 (1%)

Query: 166  VFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
            +F EM+  G E N F+   V  A     DV   E +H   +K  F S V   +  A +++
Sbjct: 645  LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVF--VGTATVDM 702

Query: 223  YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTM 279
            +V+C     A K+F+ + E D  +W+  ++  C      +AF LF+++R N+   +  T+
Sbjct: 703  FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTV 762

Query: 280  INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
            + L+ S   E+ L+  + + A   ++G    V++ N  IS YGKCG ++ A+ +F+ +  
Sbjct: 763  MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 822

Query: 340  KDS--VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
             D   VSWNSM   YS  G    A  ++C ML     P+  T  ++  +  N ++L Q  
Sbjct: 823  GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 882

Query: 398  QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
             +HSH I  G   D   I+  I+ Y K      ++ +   +  +  V    + S      
Sbjct: 883  LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 942

Query: 458  CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA-LKARYDQDIFVE 516
               EAL L+  +  S  + +  T   ++  C     LE GK I   A +      ++ + 
Sbjct: 943  DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 1002

Query: 517  SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            +A+IDMY KCG+I +A+  F      ++  W  M+ GYA +G + E   LF+KM     K
Sbjct: 1003 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 1062

Query: 577  PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
            P+ IT+LAVL +C H+G + +   Y   M  ++ + P L+HY+C+VDLLGR G LE A  
Sbjct: 1063 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 1122

Query: 637  TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
             I  M   PDA IW +LL+AC I+ N+ +   A   L  L+P   + YV ++N+YA+AGM
Sbjct: 1123 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 1182

Query: 697  WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            W+   ++R  MK++ + K PG S I V G  H F  G+  H +++ IY
Sbjct: 1183 WDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 1230



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 28/507 (5%)

Query: 65   ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIE 121
            +L LF  ++  G  P+ FTF  + KAC  L +    E+VH   +K  F S V++ +  ++
Sbjct: 642  SLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVD 701

Query: 122  NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
             + K   +  A   F    + D   + AM+ G+  +G  DK+  +F EMR     LNE +
Sbjct: 702  MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR-----LNEIT 756

Query: 182  ------LTAVLGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
                  +T +  ASF+  +K  E +H  G+++G    V   + N  ++ Y +CG  LD+ 
Sbjct: 757  PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT--VANTWISTYGKCGD-LDSA 813

Query: 234  KM-FDEITEPD--VVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            K+ F+ I   D  VVSW+    A     +  +AFGL+  +   +F+ +  T INL +S  
Sbjct: 814  KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 873

Query: 288  GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                L  G+ I +    +G  + +   N  ISMY K      AR +FD +  +  VSW  
Sbjct: 874  NPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTV 933

Query: 348  MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
            MI+GY+E G  ++AL +F  M++    P+  T+ S++       SL+    + +     G
Sbjct: 934  MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 993

Query: 408  FLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
               D+ MI + LI  Y KC +++E++ +     +K  V    + +         EAL+L+
Sbjct: 994  CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 1053

Query: 467  RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCK 525
              +     + N  TF  VL+ACA    LE+G +  H +         +   S ++D+  +
Sbjct: 1054 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 1113

Query: 526  CGTIEDAKRAFRKICRDSLAG-WNAMM 551
             G +E+A    R +     AG W A++
Sbjct: 1114 KGKLEEALELIRNMSAKPDAGIWGALL 1140



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 223/457 (48%), Gaps = 23/457 (5%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            +++ LIK+    D  + T  +  F K      A +       RD  T+NA++SG   FCQ
Sbjct: 680  VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG---FCQ 736

Query: 62   SG---PALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYL 115
            SG    A  LF  +R   + PD+ T  +L+++     SL+  E +H V ++LG   +V +
Sbjct: 737  SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 796

Query: 116  VSGFIENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGE-FDKSKEVFVEMR- 171
             + +I  Y K G++ SA++ F   D  D   V++ +M   Y   GE FD      + +R 
Sbjct: 797  ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 856

Query: 172  SLGLELNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
                +L+ F +L A       + +G  IH   + +G    +     N  +++Y +     
Sbjct: 857  EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDI--EAINTFISMYSKSEDTC 914

Query: 231  DAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
             A  +FD +T    VSW+  I   A   D  EA  LF  +  +  + +  T+++L+S  G
Sbjct: 915  SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 974

Query: 288  GERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GK I A     G   + V I NALI MY KCG +++AR IFD    K  V+W 
Sbjct: 975  KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 1034

Query: 347  SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            +MIAGY+ NG F +AL +F  M++    PN  T  ++L+A ++S SL++  + + HI+K 
Sbjct: 1035 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQ 1093

Query: 407  GFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
             + +   +   SC++   G+   L E+  ++  +  K
Sbjct: 1094 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 1130



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 14/208 (6%)

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           E+L L+R +     E N  TF  V KACA + D+   + +H   +K+ +  D+FV +A +
Sbjct: 641 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 700

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DM+ KC +++ A + F ++       WNAM+ G+ Q G   +  +LF +M    + PD +
Sbjct: 701 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 760

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGA 634
           T + ++ S             L  +  +H      G+  Q+      +   G+ G L+ A
Sbjct: 761 TVMTLIQSASF-------EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 813

Query: 635 KMTIDQMPIPPDAHI-WQSLLSACTIYG 661
           K+  + +       + W S+  A +++G
Sbjct: 814 KLVFEAIDRGDRTVVSWNSMFKAYSVFG 841



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 2/258 (0%)

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           +WN  I          ++L +F  M      PN +T   + +A +    +     VH+H+
Sbjct: 625 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 684

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           IKS F  D  + +  +  + KCN+++ + +V   + +++A   NA+ S    +    +A 
Sbjct: 685 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 744

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+R +  +    +  T   ++++ +    L+  +A+H + ++   D  + V +  I  Y
Sbjct: 745 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 804

Query: 524 CKCGTIEDAKRAFRKICR--DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
            KCG ++ AK  F  I R   ++  WN+M   Y+  G   +   L+  M +   KPD  T
Sbjct: 805 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 864

Query: 582 YLAVLTSCCHAGLVREAR 599
           ++ +  SC +   + + R
Sbjct: 865 FINLAASCQNPETLTQGR 882


>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/534 (34%), Positives = 283/534 (52%), Gaps = 22/534 (4%)

Query: 242 PDVVSWSERIAAACDG---VEAFGLFKD-LRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           P+  SW+  I    D     EA  L+K  L+ +  + + YT   L  +     ++R G +
Sbjct: 41  PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 100

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I      +GF   + + NA+I +   CG ++ AR +FD    +D VSWNSMI GY   G+
Sbjct: 101 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 160

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +AL+ +  M    + P+  TM  ++ + +  + L    + H +I ++G  L   + + 
Sbjct: 161 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANA 220

Query: 418 LITTYGKCNALNESKRVLS----------------EIDKKNAVHINALASVLVYASCHAE 461
           L+  Y KC  L  ++++                  E+  K+ V  NA+    V+A+   E
Sbjct: 221 LMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKE 280

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           AL L+  +       +  T    L AC+ +  L+ G  IH    K     ++ + +A+ID
Sbjct: 281 ALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALID 340

Query: 522 MYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           MY KCG I  A + F+++  R+SL  W A++ G A HG  H     F++M    V PDE+
Sbjct: 341 MYAKCGKITKAIQVFQELPGRNSLT-WTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEV 399

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T+L +L++CCH GLV E R Y S MS    L P+L+HY+C+VDLLGR GLLE A+  I  
Sbjct: 400 TFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKS 459

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MPI  DA +W +L  AC I+GN+ +G  A SKLL++ P +   YVLL+N+Y  A MW + 
Sbjct: 460 MPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEA 519

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           GK RK M+++ + K PG S I V G  + F   D SH QS++IY+ LI+L   +
Sbjct: 520 GKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQL 573



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 219/456 (48%), Gaps = 35/456 (7%)

Query: 14  DPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           D   S+ LI+    +++ D       LF+T+N +  ++N  I G         A+ L+ R
Sbjct: 9   DGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKR 68

Query: 72  -LRYQGLRPDAFTFSSLVKACGSLQ----ENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
            L+  G +PD +T+  L KAC  L      +EI+ G  L LGF S +++ +  I      
Sbjct: 69  VLQCDGTKPDNYTYPLLFKACARLSLIRMGSEIL-GHVLHLGFDSDIFVSNAVIHLLVSC 127

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G++  A   F      D V++ +M+ GYV  G   ++   + EM+  G++ +E ++  V+
Sbjct: 128 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 187

Query: 187 GASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK--------- 234
            +     D+  G + H +  + G    V   L NA+M++Y++CG    A K         
Sbjct: 188 SSCAQLEDLDLGRESHCYIEENGLKLTV--PLANALMDMYMKCGNLESARKLFDSMTNKT 245

Query: 235 -------MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLS 284
                  +FDE+ + DVV W+  I     A  G EA  LF +++  +   +E TM++ LS
Sbjct: 246 MVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 305

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +      L  G  I  +  K      V++G ALI MY KCG++  A  +F  L  ++S++
Sbjct: 306 ACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLT 365

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           W ++I+G + +G  + A+  F  M++ S++P+  T   +L A  +   +++  +  S  +
Sbjct: 366 WTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ-M 424

Query: 405 KSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
            S F L   +   SC++   G+   L E++ ++  +
Sbjct: 425 SSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSM 460



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 163/368 (44%), Gaps = 33/368 (8%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G   D  +S  +I       D   A +    +  RD++++N++I+G  R   +  AL  +
Sbjct: 109 GFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFY 168

Query: 70  DRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKS 126
             ++ +G++PD  T   +V +C  L++ ++    H    + G    V L +  ++ Y K 
Sbjct: 169 REMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKC 228

Query: 127 GEIVSAE----------------MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
           G + SA                 M F +  D D V + AM+ GYV      ++  +F EM
Sbjct: 229 GNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM 288

Query: 171 RSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           +++ +  +E ++ + L A     + DV  G  IH +  K      V   L  A++++Y +
Sbjct: 289 QAMNINPDEVTMVSCLSACSQLGALDV--GIWIHHYIEKHELSLNVA--LGTALIDMYAK 344

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINL 282
           CG+   A+++F E+   + ++W+  I+      +   A   F ++  N    +E T + L
Sbjct: 345 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 404

Query: 283 LSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFK 340
           LS+     ++  G++       K      +   + ++ + G+ G + +A  +   + I  
Sbjct: 405 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 464

Query: 341 DSVSWNSM 348
           D+V W ++
Sbjct: 465 DAVVWGAL 472



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 10/173 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  + K+   L+  L T LI  + K     +A +   +   R+ +T+ A+ISGLA    
Sbjct: 319 IHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGN 378

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQE--NEIVHGVCLKLGFSSRVYLVS 117
           +  A+  F  +    + PD  TF  L+ AC  G L E   +    +  K   S ++   S
Sbjct: 379 AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYS 438

Query: 118 GFIENYAKSGEIVSAEMCFRDC-LDLDNVAYTAM-----VCGYVWNGEFDKSK 164
             ++   ++G +  AE   +   ++ D V + A+     + G V  GE   SK
Sbjct: 439 CMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASK 491


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 303/547 (55%), Gaps = 11/547 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N ++N Y +      A ++FDEI +PD+VS++  IAA  D  E      LF+++R     
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T+  ++++ G +  L   +Q+  F    G     S+ NA+++ Y + G +++AR +
Sbjct: 139 LDGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196

Query: 334 FDYLI---FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
           F  +     +D VSWN+MI    ++    +A+ +F  M+   L  + +TMAS+L A +  
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC-NALNESKRVLSEIDKKNAVHINAL 449
           K L    Q H  +IKSGF  +  + S LI  Y KC  ++ E ++V  EI   + V  N +
Sbjct: 257 KDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTM 316

Query: 450 ASVL-VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            S   +Y     + L  +R +  +    +  +F  V  AC+ ++    GK +H LA+K+ 
Sbjct: 317 ISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSD 376

Query: 509 YDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
              + + V +A++ MY KCG + DA+R F  +   +    N+M+ GYAQHG   E   LF
Sbjct: 377 VPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLF 436

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M +  + P+ IT++AVL++C H G V E + Y + M +   + P+ EHY+C++DLLGR
Sbjct: 437 ELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGR 496

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L+ A+  I+ MP  P +  W +LL AC  +GN++L + A ++ L L+P N + YV+L
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVML 556

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+YASA  W +   +++ M+E+ + K+PG SWI +    H F A D+SH   KEI+  +
Sbjct: 557 SNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYM 616

Query: 748 IKLYEHM 754
            K+ + M
Sbjct: 617 GKMLKKM 623



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 231/435 (53%), Gaps = 18/435 (4%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            TLI+ + K +    A R   +    DI++YN LI+  A   + GP L+LF+ +R   L 
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 79  PDAFTFSSLVKACG-SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
            D FT S ++ ACG  +     +H   +  G      + +  +  Y++ G +  A   FR
Sbjct: 139 LDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFR 198

Query: 138 DCLD---LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
           +  +    D V++ AM+     + E  ++  +F EM   GL+++ F++ +VL A   VK+
Sbjct: 199 EMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKD 258

Query: 195 ---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC-GQKLDAVKMFDEITEPDVVSWSER 250
              G Q HG  +K GF     +H+ + +++LY +C G  ++  K+F+EIT PD+V W+  
Sbjct: 259 LVGGRQFHGMMIKSGFHGN--SHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTM 316

Query: 251 IAAAC--DGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
           I+     + +   GL  F++++ N F+ ++ + + + S+         GKQ+ A   K  
Sbjct: 317 ISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSD 376

Query: 307 F-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
                VS+ NAL++MY KCG V+DAR +FD +   ++VS NSMIAGY+++G   ++L +F
Sbjct: 377 VPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLF 436

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYG 423
             MLE  + PN  T  ++L A  ++  +++  Q + +++K  F ++      SC+I   G
Sbjct: 437 ELMLEKDIAPNSITFIAVLSACVHTGKVEEG-QKYFNMMKERFCIEPEAEHYSCMIDLLG 495

Query: 424 KCNALNESKRVLSEI 438
           +   L E++R++  +
Sbjct: 496 RAGKLKEAERIIETM 510



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 244/536 (45%), Gaps = 37/536 (6%)

Query: 67  KLFDRLRYQGLRPDAF----TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           K+   L ++ L P +      F+ L   CGSL   +        L     V+  +  I  
Sbjct: 29  KILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ----TSFHLTQYPNVFSYNTLINA 84

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAK   I  A   F +    D V+Y  ++  Y   GE   +  +F E+R L L L+ F+L
Sbjct: 85  YAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTL 144

Query: 183 TAVLGA-SFDVKEGEQIHGFGVKVGFLSGVCNH-----LNNAIMNLYVRCGQKLDAVKMF 236
           + V+ A   DV    Q+H F V       VC H     +NNA++  Y R G   +A ++F
Sbjct: 145 SGVITACGDDVGLVRQLHCFVV-------VCGHDCYASVNNAVLACYSRKGFLSEARRVF 197

Query: 237 DEITE---PDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            E+ E    D VSW+  I A     +G+EA GLF+++     +++ +TM ++L++    +
Sbjct: 198 REMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVK 257

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWNSMI 349
            L  G+Q      K GF     +G+ LI +Y KC G + + R +F+ +   D V WN+MI
Sbjct: 258 DLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMI 317

Query: 350 AGYS-ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +G+S         L  F  M      P+  +   +  A SN  S     QVH+  IKS  
Sbjct: 318 SGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDV 377

Query: 409 LLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
             +  S+ + L+  Y KC  +++++RV   + + N V +N++ +         E+L L+ 
Sbjct: 378 PYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFE 437

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
            +       N  TF  VL AC     +E+G+    + +K R+  +   E  S +ID+  +
Sbjct: 438 LMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNM-MKERFCIEPEAEHYSCMIDLLGR 496

Query: 526 CGTIEDAKRAFRKICRDSLA-GWNAMMMGYAQHGCYH---EVSNLFNKMSKFGVKP 577
            G +++A+R    +  +  +  W  ++    +HG      + +N F ++  +   P
Sbjct: 497 AGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 218/495 (44%), Gaps = 67/495 (13%)

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND-- 329
           + +   T  NLL +   +R L  GK + A  +K        + N    +Y KCG +++  
Sbjct: 5   YPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64

Query: 330 -----------------------------ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
                                        AR +FD +   D VS+N++IA Y++ G    
Sbjct: 65  TSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGP 124

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
            L +F  + E  L  +G+T++ ++ A  +   L +  Q+H  ++  G     S+ + ++ 
Sbjct: 125 TLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVR--QLHCFVVVCGHDCYASVNNAVLA 182

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE---LYRTIWGSCREVN 477
            Y +   L+E++RV  E+ +       +  +++V    H E +E   L+R +     +V+
Sbjct: 183 CYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVD 242

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC-GTIEDAKRAF 536
             T + VL A   + DL  G+  H + +K+ +  +  V S +ID+Y KC G++ + ++ F
Sbjct: 243 MFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVF 302

Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSN----LFNKMSKFGVKPDEITYLAVLTSCCH- 591
            +I    L  WN M+ G++    Y ++S      F +M + G +PD+ +++ V ++C + 
Sbjct: 303 EEITAPDLVLWNTMISGFS---LYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNL 359

Query: 592 --AGLVREARTYLSCMSDLHGLIP--QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
               L ++    L+  SD    +P  ++     +V +  + G +  A+   D MP     
Sbjct: 360 SSPSLGKQVHA-LAIKSD----VPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP----E 410

Query: 648 HIWQSLLSACTIYGNIDLGLLAGS-KLLELQ-----PDNESTYVLLSNLYASAGMWNDVG 701
           H   SL S   I G    G+   S +L EL        N  T++ + +     G   +  
Sbjct: 411 HNTVSLNS--MIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQ 468

Query: 702 KLRKEMKEKFLCKEP 716
           K    MKE+F C EP
Sbjct: 469 KYFNMMKERF-CIEP 482



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARF 59
           Q + ++IK+G H +  + + LI  ++K A      R +F +    D++ +N +ISG + +
Sbjct: 264 QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLY 323

Query: 60  CQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVY 114
              S   L  F  ++  G RPD  +F  +  AC +L    +   VH + +K     +RV 
Sbjct: 324 EDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVS 383

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y+K G +  A   F    + + V+  +M+ GY  +G   +S  +F  M    
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKD 443

Query: 175 LELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  +  AVL A   +  V+EG++      +   +     H  + +++L  R G+  +
Sbjct: 444 IAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHY-SCMIDLLGRAGKLKE 502

Query: 232 AVKMFDEIT-EPDVVSWSERIAAACD------GVEAFGLFKDLRFNDFQINEYTMIN 281
           A ++ + +   P  + W+  + A          V+A   F  LR   +    Y M++
Sbjct: 503 AERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF--LRLEPYNAAPYVMLS 557


>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g08490
 gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 226/810 (27%), Positives = 398/810 (49%), Gaps = 66/810 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           ++  + K GH     +S ++++ + K     D ++ FR      + D + +N +++GL+ 
Sbjct: 43  LHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFR---QMDSLDPVVWNIVLTGLSV 99

Query: 59  FCQSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVY 114
            C     ++ F  + +    +P + TF+ ++  C  L ++   + +H   +K G      
Sbjct: 100 SCGR-ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTL 158

Query: 115 LVSGFIENYAKSGEIVS-AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           + +  +  YAK G I   A   F    D D V++ A++ G+  N     +   F  M   
Sbjct: 159 VGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE 218

Query: 174 GLELNEFSLTAVLG--ASFD----VKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYV 224
             E N  ++  VL   AS D     + G QIH + V+  +L     VCN L    ++ Y+
Sbjct: 219 PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSL----VSFYL 274

Query: 225 RCGQKLDAVKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDL-RFNDFQINEYTMI 280
           R G+  +A  +F  +   D+VSW+  IA   + C+  +AF LF +L    D   +  T+I
Sbjct: 275 RVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTII 334

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++L        L +GK+I ++  +  ++ E  S+GNALIS Y + G  + A   F  +  
Sbjct: 335 SILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST 394

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           KD +SWN+++  ++++    Q L++  H+L  ++  +  T+ S+L+   N + + +  +V
Sbjct: 395 KDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV 454

Query: 400 HSHIIKSGFLLDD---SMISCLITTYGKCNALNESKRV-LSEIDKKNAVHINALAS---- 451
           H + +K+G L D+    + + L+  Y KC  +  + ++ L   +++  V  N+L S    
Sbjct: 455 HGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVN 514

Query: 452 -------------------------VLVYAS--CHAEALELYRTIWGSCREVNGSTFSIV 484
                                    V +YA   C  EA+ ++R I       N  T   +
Sbjct: 515 SGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNL 574

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L  CA +  L   +  H   ++     DI ++  ++D+Y KCG+++ A   F+   R  L
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDL 633

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
             + AM+ GYA HG   E   +++ M++  +KPD +    +LT+CCHAGL+++       
Sbjct: 634 VMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDS 693

Query: 605 MSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
           +  +HG+ P +E YAC VDL+ R G L+ A   + QMP+ P+A+IW +LL ACT Y  +D
Sbjct: 694 IRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMD 753

Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
           LG    + LL+ + D+   +VL+SN+YA+   W  V +LR  MK+K + K  G SW+ V 
Sbjct: 754 LGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVD 813

Query: 725 GYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G  + F +GD SH +   I+  +  LY  M
Sbjct: 814 GQRNVFVSGDCSHPRRDSIFDLVNALYLQM 843



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 155/685 (22%), Positives = 303/685 (44%), Gaps = 69/685 (10%)

Query: 63  GPALKLFDRLRY-QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
           GP  +     R   G   D   F  +VKAC S   L     +HG   KLG  +   +   
Sbjct: 2   GPLRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK   +   +  FR    LD V +  ++ G   +    +    F +      E  
Sbjct: 62  VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGL--SVSCGRETMRFFKAMHFADEPK 119

Query: 179 EFSLTAVLGASFDVK-----EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DA 232
             S+T  +     V+      G+ +H + +K G        + NA++++Y + G    DA
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTL--VGNALVSMYAKFGFIFPDA 177

Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL---SSV 286
              FD I + DVVSW+  IA   +     +AF  F  +     + N  T+ N+L   +S+
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237

Query: 287 GGERILRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
                 R+G+QI ++  +  +++  V + N+L+S Y + G++ +A S+F  +  KD VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297

Query: 346 NSMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           N +IAGY+ N  + +A  +F +++ +  + P+  T+ SIL   +    L    ++HS+I+
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357

Query: 405 KSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           +  +LL+D+ + + LI+ Y +    + +    S +  K+ +  NA+      +    + L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA---RYDQDIFVESAVI 520
            L   +      ++  T   +LK C  +  + + K +H  ++KA     +++  + +A++
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALL 477

Query: 521 DMYCKCGTIE--------------------------------DAKRAFRKICRDSLAGWN 548
           D Y KCG +E                                DA+  F ++    L  W+
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWS 537

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG---LVREARTYLSCM 605
            M+  YA+  C +E   +F ++   G++P+ +T + +L  C       LVR+   Y+   
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI--- 594

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
             + G +  +     ++D+  + G L+ A  ++ Q     D  ++ ++++   ++G    
Sbjct: 595 --IRGGLGDIRLKGTLLDVYAKCGSLKHA-YSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651

Query: 666 GLLAGSKLLE--LQPDNESTYVLLS 688
            L+  S + E  ++PD+     +L+
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLT 676


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 201/739 (27%), Positives = 367/739 (49%), Gaps = 31/739 (4%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           +++ +  G+  +P ++  LIS +        +         +D   +N+ +  L      
Sbjct: 31  HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 90

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV-SG 118
              L  +  +R + + P+ FTF  +  +      ++    +H +  K+GF      V S 
Sbjct: 91  PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 150

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
           F+  Y++  E+  A   F +    D VA+TA+V GYV NGE +   E   EM  +G +  
Sbjct: 151 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 210

Query: 179 EFSLTAVLGASF------DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +   + G         D+  G  +HG  VK G   G    + ++++++Y +CG   +A
Sbjct: 211 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGI--GCLLDIQSSVLSMYCKCGVPREA 268

Query: 233 VKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-LRF------NDFQINEYTMINLLSS 285
            + F E+   D++SW+  I         FG+  D +RF      N    +   +  +LS 
Sbjct: 269 YQSFSEVINKDLLSWTSMIRVYA----RFGMMSDCVRFFWEMLENQVCPDGMVIGCILSG 324

Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS- 344
            G    +  GK       +  +     + N+L+SMY K G ++ A  +F     + S+  
Sbjct: 325 FGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR--SQGSIEY 382

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN MI GY   G   + + +F  M    +      + S + +      +     +H ++I
Sbjct: 383 WNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVI 442

Query: 405 KSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           K GF+ +  S+ + LI  YGKC+ +N S R+ +   +++ +  NAL S  ++   + EA+
Sbjct: 443 K-GFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAI 500

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
            L+  +    +  N +T  +VL AC+ +  LE+G+ +H    +  +  ++ + +A++DMY
Sbjct: 501 SLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMY 560

Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
            KCG +E ++  F  +    +  WNAM+ GY  +G       +FN M +  VKP+EIT+L
Sbjct: 561 AKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFL 620

Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
           ++L++C HAGLV E +   + M   + + P L+HY C+VDLLGR   LE A+  +  MPI
Sbjct: 621 SLLSACAHAGLVEEGKNVFAKMQS-YSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPI 679

Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
           PPD  +W +LLSAC  +  I++G+  G   ++ +P+N+  Y++++N+Y+S G W++   +
Sbjct: 680 PPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENV 739

Query: 704 RKEMKEK-FLCKEPGYSWI 721
           R+ MK++  + K+ G+S +
Sbjct: 740 RRTMKDRCSMGKKAGWSMV 758



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +++  + + G  L+  L T L+  + K     ++ R +FD+   +D+I +NA+ISG    
Sbjct: 536 RLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKS-REVFDSMMEKDVICWNAMISGYGMN 594

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
             +  A+++F+ +    ++P+  TF SL+ AC 
Sbjct: 595 GYAESAIEIFNLMEESNVKPNEITFLSLLSACA 627


>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
 gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 198/732 (27%), Positives = 349/732 (47%), Gaps = 82/732 (11%)

Query: 64  PALKLFDRL-------------RYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFS 110
           PA  LF RL              Y     D+F    L     +LQ     H + +  G +
Sbjct: 6   PAHHLFRRLFPSPFQISYHSSSNYLNCHIDSF----LSNQTQTLQSLHKSHALIITTGNA 61

Query: 111 SRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM 170
           + V++ S  I  YA   +  S+   F      D   + +++  +  NG + K+ + +++M
Sbjct: 62  NNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQM 121

Query: 171 RSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           R      N+F++  ++    ++   +EG+ IHG   K G  +   + + ++ + +Y +CG
Sbjct: 122 RYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAE-NSAVGSSFVYMYAKCG 180

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMIN 281
              DA  MFDEI   DVVSW+  +        +  G+E     + +  +  ++N  T+  
Sbjct: 181 VMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEG 240

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
              + G    + AG+ +     K G      + ++L+SMY KCG V +A + F  ++ KD
Sbjct: 241 GFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKD 300

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
             SW S+I   +  GF N+ L++F  M    + P+G  ++ IL    NS  +++    H 
Sbjct: 301 VFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHG 360

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVL-------------------------- 435
            I++  ++LDD++ + L++ Y K   LN ++++                           
Sbjct: 361 LIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKN 420

Query: 436 ----------SEID------------------KKNAVHINALASVLVYASCHAEALELYR 467
                     S ID                  +++ V  N L S   ++  +AEA+ L+ 
Sbjct: 421 SVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFD 480

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            +       N +T  IVL AC  +  LE+GK +H    +  ++ ++ + +A++DMY KCG
Sbjct: 481 EMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCG 540

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            +E ++  F  +    +  WN M+ GY  HG  +    +F +M +  VKP+ IT+L++L+
Sbjct: 541 QLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLS 600

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           +C HAG V E +     M   + + P L+H+AC+ DLLGR G L+ A+  +  MPI PD 
Sbjct: 601 ACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDG 659

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
            +W +LLSAC I+  I++G+      +E  P+N+  Y++LSN+Y S G W++  + R+ M
Sbjct: 660 GVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELM 719

Query: 708 KEKFLCKEPGYS 719
           KE+ + K  G+S
Sbjct: 720 KERGIGKRAGWS 731



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/417 (20%), Positives = 170/417 (40%), Gaps = 74/417 (17%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L +K G     ++ ++L+S ++K  +   A        ++D+ ++ ++I   ARF  
Sbjct: 257 LHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGF 316

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
               L LF  ++   + PD    S ++   G+   ++E +  HG+ ++  +     + + 
Sbjct: 317 MNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNA 376

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV----------------------- 155
            +  Y K G +  AE  F    +    ++  MV GYV                       
Sbjct: 377 LLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMY 436

Query: 156 ----------------------WN---------GEFDKSKEVFVEMRSLGLELNEFSLTA 184
                                 WN         G + ++  +F EM S  L  N  +L  
Sbjct: 437 GKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVI 496

Query: 185 VLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
           VL A      +++G+ +H +  + GF   V   L  A++++Y +CGQ   + ++F+ + E
Sbjct: 497 VLSACCHLPSLEKGKMVHQYIKEGGFELNVS--LGTALVDMYAKCGQLEQSRELFNSMKE 554

Query: 242 PDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            DV+SW+  I+      D   A  +F+ +  ++ + N  T ++LLS+      +  GKQ+
Sbjct: 555 KDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQL 614

Query: 299 ----QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIA 350
               Q +  K        + + L    G+ G + +A  +   + I  D   W ++++
Sbjct: 615 FDRMQYYSIKPNLKHFACMADLL----GRSGNLQEAEDLVQSMPICPDGGVWGTLLS 667


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 163/494 (32%), Positives = 277/494 (56%), Gaps = 14/494 (2%)

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           D RF +  + + T+  LL+          G+ +     +  F   + + N L++MY KCG
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQ---------GRIVHGHLIQSIFRHDLVMNNTLLNMYAKCG 100

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            + +AR +FD +  +D V+W ++I+GYS++     AL +F  ML F   PN +T++S+++
Sbjct: 101 SLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIK 160

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A +  +      Q+H   +K GF  +  + S L+  Y +   +++++ V   ++ +N V 
Sbjct: 161 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 220

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            NAL +         +ALEL++ +       +  +++ +  AC++   LEQGK +H   +
Sbjct: 221 WNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 280

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K+      F  + ++DMY K G+I DA++ F ++ +  +  WN+++  YAQHG  +E   
Sbjct: 281 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVC 340

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
            F +M + G++P+EI++L+VLT+C H+GL+ E   Y   M    G++ +  HY  IVDLL
Sbjct: 341 WFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVLEAWHYVTIVDLL 399

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
           GR G L  A   I++MPI P A IW++LL+AC ++ N +LG  A   + EL PD+   +V
Sbjct: 400 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 459

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           +L N+YAS G WND  ++RK+MKE  + KEP  SW+ +    H F A D  H Q +EI +
Sbjct: 460 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 519

Query: 746 ELIKLYEHMVATAK 759
           +    +E ++A  K
Sbjct: 520 K----WEEVLAKIK 529



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 185/368 (50%), Gaps = 11/368 (2%)

Query: 80  DAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D   +++L+K C     L +  IVHG  ++  F   + + +  +  YAK G +  A   F
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
               + D V +T ++ GY  +     +  +F +M   G   NEF+L++V+ A+   +   
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G Q+HGF VK GF S V  H+ +A+++LY R G   DA  +FD +   + VSW+  IA 
Sbjct: 170 CGHQLHGFCVKCGFDSNV--HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 227

Query: 254 ---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
               C   +A  LF+ +    F+ + ++  +L  +      L  GK + A+  K G   V
Sbjct: 228 HARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 287

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
              GN L+ MY K G ++DAR IFD L  +D VSWNS++  Y+++GF N+A+  F  M  
Sbjct: 288 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRR 347

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PN  +  S+L A S+S  L +    +  + K G +L+      ++   G+   LN 
Sbjct: 348 GGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNR 407

Query: 431 SKRVLSEI 438
           + R + E+
Sbjct: 408 ALRFIEEM 415



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 189/370 (51%), Gaps = 6/370 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           + +G  +HG  ++  F   +   +NN ++N+Y +CG   +A K+FD++ E D V+W+  I
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLV--MNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLI 124

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         +A  LF  +    F  NE+T+ +++ +   ER    G Q+  FC K GF 
Sbjct: 125 SGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 184

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             V +G+AL+ +Y + G ++DA+ +FD L  ++ VSWN++IAG++      +AL++F  M
Sbjct: 185 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGM 244

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L     P+ ++ AS+  A S++  L+Q   VH+++IKSG  L     + L+  Y K  ++
Sbjct: 245 LREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 304

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++++++   + K++ V  N+L +         EA+  +  +       N  +F  VL AC
Sbjct: 305 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTAC 364

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-W 547
           +    L++G   + L  K     + +    ++D+  + G +  A R   ++  +  A  W
Sbjct: 365 SHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIW 424

Query: 548 NAMMMGYAQH 557
            A++     H
Sbjct: 425 KALLNACRMH 434



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 176/358 (49%), Gaps = 12/358 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  LI++    D +++ TL++ + K      A +       RD +T+  LISG ++  +
Sbjct: 73  VHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDR 132

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSG 118
              AL LF+++   G  P+ FT SS++KA  + +       +HG C+K GF S V++ S 
Sbjct: 133 PFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 192

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y + G +  A++ F      ++V++ A++ G+      +K+ E+F  M   G   +
Sbjct: 193 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPS 252

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            FS  ++ GA      +++G+ +H + +K G    +     N ++++Y + G   DA K+
Sbjct: 253 HFSYASLFGACSSTGFLEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKI 310

Query: 236 FDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD + + DVVSW+  + A      G EA   F+++R    + NE + +++L++     +L
Sbjct: 311 FDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLL 370

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
             G        K G +        ++ + G+ G +N A R I +  I   +  W +++
Sbjct: 371 DEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 428



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 14/192 (7%)

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
           GS   V+   ++ +LK C     L QG+ +H   +++ +  D+ + + +++MY KCG++E
Sbjct: 44  GSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLE 103

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A++ F K+       W  ++ GY+QH    +   LFN+M +FG  P+E T  +V+ +  
Sbjct: 104 EARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAA 163

Query: 591 HAGLVREARTYLSCMSDLHGLI------PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
                  A     C   LHG          +   + ++DL  R GL++ A++  D +   
Sbjct: 164 -------AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 216

Query: 645 PDAHIWQSLLSA 656
            D   W +L++ 
Sbjct: 217 NDVS-WNALIAG 227


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 183/531 (34%), Positives = 282/531 (53%), Gaps = 23/531 (4%)

Query: 239 ITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           + +  V SW+  IA    + D ++A   F  +R      N  T    + S      L AG
Sbjct: 46  VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           KQI    +  G+   + + +ALI MY KCG +NDAR +FD +  ++ VSW SMI+GY +N
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN 165

Query: 356 GFFNQALDMFCHMLEFSLIP--------------NGYTMASILEAVSNSKSLKQAMQVHS 401
               +A+ +F    EF L+               +   +  ++ A +          VH 
Sbjct: 166 ERAREAVFLF---KEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHG 222

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
             +K GF    ++ + L+  Y KC  ++ S++V   +++ +    N+L +V        E
Sbjct: 223 LAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVE 282

Query: 462 ALELYRTI--WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           A  L+  +   G  R  N  T S VL ACA    L+ GK IH   +K   + ++ V +++
Sbjct: 283 AFSLFSDMVKRGEVR-YNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSI 341

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           +DMYCKCG +E A++AF ++ R ++  W  M+ GY  HG   E   +F +M + G+KP+ 
Sbjct: 342 VDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNY 401

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           IT+++VL +C HAGL++E   + + M     + P +EHY+C+VDLLGR G L+ A   I 
Sbjct: 402 ITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQ 461

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +M + PD  +W SLL AC I+ N++LG ++  KL +L P N   YVLLSN+YA AG W+D
Sbjct: 462 EMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDD 521

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           V ++R  MK   L K PGYS +   G  H F  GD  H Q ++IY+ L +L
Sbjct: 522 VERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDEL 572



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 217/439 (49%), Gaps = 34/439 (7%)

Query: 29  ADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLV 88
           A+ R  F    D  +  + ++N++I+  AR   S  AL  F  +R   L P+  TF   +
Sbjct: 36  ANLRSMFGKYVDKTS--VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTI 93

Query: 89  KACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           K+C SL +    + +H      G+ S +++ S  I+ Y+K G +  A   F +  + + V
Sbjct: 94  KSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVV 153

Query: 146 AYTAMVCGYVWNGEFDKSKE-VFVEMRSLGLELNEFS-------------LTAVLGASFD 191
           ++T+M+ GYV N   ++++E VF+    L ++  ++              L  V+ A   
Sbjct: 154 SWTSMISGYVQN---ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACAR 210

Query: 192 V---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           V      E +HG  VK GF    C  + N +M+ Y +CG+   + K+FD + E DV SW+
Sbjct: 211 VCVKSVTECVHGLAVKKGFEG--CLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268

Query: 249 ERIAA-ACDG--VEAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
             IA  A +G  VEAF LF D+ +  + + N  T+  +L +      L+ GK I     K
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +   + + +G +++ MY KCG+V  AR  FD L  K+  SW  M+AGY  +G   +A+ +
Sbjct: 329 MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKV 388

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTY 422
           F  M+   + PN  T  S+L A S++  LK+     +  +K  F ++  +   SC++   
Sbjct: 389 FYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNK-MKCEFDVEPGIEHYSCMVDLL 447

Query: 423 GKCNALNESKRVLSEIDKK 441
           G+   L E+  ++ E+  K
Sbjct: 448 GRAGYLKEAYGLIQEMKVK 466



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 201/410 (49%), Gaps = 29/410 (7%)

Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGFG 202
           ++ +++  +  +G+  ++   F  MR L L  N  +    + +    +D+  G+QIH   
Sbjct: 53  SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVE 259
              G+ S +   + +A++++Y +CG   DA K+FDEI E +VVSW+  I+         E
Sbjct: 113 FVFGYGSDI--FVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170

Query: 260 AFGLFKDLRFND----------FQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFM 308
           A  LFK+    D              +  ++  + S      +++  + +     K GF 
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             +++GN L+  Y KCG+++ +R +FD +   D  SWNS+IA Y++NG   +A  +F  M
Sbjct: 231 GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDM 290

Query: 369 LEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKC 425
           ++   +  N  T++++L A ++S +L+    +H  ++K    L+D+++  + ++  Y KC
Sbjct: 291 VKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK--MELEDNLVVGTSIVDMYCKC 348

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             +  +++    + +KN      + +         EA++++  +     + N  TF  VL
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVL 408

Query: 486 KACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
            AC+    L++G   H    +K  +D +  +E  S ++D+  + G +++A
Sbjct: 409 AACSHAGLLKEG--WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEA 456


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 203/719 (28%), Positives = 373/719 (51%), Gaps = 54/719 (7%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGV 103
           I  N +++ LAR  Q   +LKLF    +    PD +  S+ + A  + +       +H +
Sbjct: 12  IKLNHMLAALARSNQHTQSLKLFVH-AHSSFTPDHYILSTAITAAANARRAAFGAQLHAL 70

Query: 104 CLKLGFSSRVYLVSGFIENYAKSG-EIVSAEMCFRD---------------CLDLDNV-- 145
            ++ G  +  ++ +  +  YAK+  ++ S ++ F++               C  LD+V  
Sbjct: 71  AVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEH 130

Query: 146 --------------AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-ASF 190
                          + A++ G    G  D +  +F +M  +G++ ++++   +L   S 
Sbjct: 131 ALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCSL 190

Query: 191 DVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE---PDVVS 246
           ++ + G  +H   +K GFL      + N+++ +Y +CG  +DA ++F+E  E    D VS
Sbjct: 191 ELFDYGRHVHSVVIKSGFLGW--TSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVS 248

Query: 247 WSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           ++  I   A+     +AF +F+D++   F   E T ++++SS      LRAG Q Q+   
Sbjct: 249 YNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSS---LRAGCQAQSQAI 305

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+GF+  V++ NA+++MY   G+V + ++IF+ +  +D VSWN M++ + +     +A+ 
Sbjct: 306 KMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAML 365

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            +  M    + P+ +T  S+L A   + SL+    +HS + KSG L+   +++ L++ Y 
Sbjct: 366 SYLKMRREGIEPDEFTYGSLLAA---TDSLQVVEMIHSLLCKSG-LVKIEVLNALVSAYC 421

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           +   +  + ++ S +  K+ +  N++ S  +      + LE +  +  +  + N  + S+
Sbjct: 422 RHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSL 481

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           VL  C++M+ +  GK +H   L+  +  ++ + +A++ MY KCG+++ A R F  +    
Sbjct: 482 VLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERD 541

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
              WNA++  YAQHG   E    F  M +  G+KPD+ T+ +VL++C HAGLV +     
Sbjct: 542 TITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIF 601

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             M  ++G +P ++H++CIVDLLGR G L+ A+  I        ++I  SL SAC  +GN
Sbjct: 602 DTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGN 661

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           + LG      +LE   +N S YVLLSN+ A+AG W +   LR+ M+E    K+PG SWI
Sbjct: 662 LGLGRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWI 720



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 264/535 (49%), Gaps = 28/535 (5%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
           TTL+S   K      A +         I  +NA+I+G A       A  LF  +   G++
Sbjct: 116 TTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVK 175

Query: 79  PDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            D +TF++++  C SL+       VH V +K GF     +V+  I  Y K G +V A   
Sbjct: 176 ADKYTFATMLSLC-SLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEV 234

Query: 136 FRDCLD---LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
           F +  +    D V+Y AM+ G+      + +  +F +M+    +  E +  +V+ +   +
Sbjct: 235 FEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSL 294

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           + G Q     +K+GF+   C  +NNA+M +Y   G+ ++   +F+ + E DVVSW+  ++
Sbjct: 295 RAGCQAQSQAIKMGFVG--CVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVS 352

Query: 253 AACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
                    EA   +  +R    + +E+T  +LL++    +++   + I +   K G ++
Sbjct: 353 MFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVV---EMIHSLLCKSGLVK 409

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + + NAL+S Y + G++  A  IF  + +K  +SWNS+I+G+  NG   Q L+ F  +L
Sbjct: 410 -IEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALL 468

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
              + PN Y+++ +L   S+  ++    QVH +I++ GF  + S+ + L+T Y KC +L+
Sbjct: 469 STQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLD 528

Query: 430 ESKRVLSEIDKKNAVHINALASVLVY------ASCHAEALELYRTIWGSCREVNGSTFSI 483
           ++ RV   + +++ +  NA+ S          A C  EA++    I     + + +TF+ 
Sbjct: 529 KALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGI-----KPDQATFTS 583

Query: 484 VLKACAAMTDLEQGKAIHCLALKAR-YDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
           VL AC+    ++ G  I    +K   +   +   S ++D+  + G +++A+R  +
Sbjct: 584 VLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIK 638



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 248/508 (48%), Gaps = 17/508 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
            ++S++IK+G      +  +LI+ + K     D    F    +  +RD ++YNA+I G A
Sbjct: 198 HVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFA 257

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
              +S  A  +F  ++     P   TF S++ +C SL+         +K+GF   V + +
Sbjct: 258 SVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQAQSQAIKMGFVGCVAVNN 317

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+  GE++  +  F    + D V++  MV  ++     +++   +++MR  G+E 
Sbjct: 318 AMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEP 377

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +EF+  ++L A+  ++  E IH    K G    V   + NA+++ Y R G+   A ++F 
Sbjct: 378 DEFTYGSLLAATDSLQVVEMIHSLLCKSGL---VKIEVLNALVSAYCRHGKIKRAFQIFS 434

Query: 238 EITEPDVVSWSERIAA-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +    ++SW+  I+    +G    GL  F  L     + N Y++  +LS       +  
Sbjct: 435 GVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSH 494

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GKQ+  +  + GF   VS+GNAL++MY KCG ++ A  +FD ++ +D+++WN++I+ Y++
Sbjct: 495 GKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQ 554

Query: 355 NGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDD 412
           +G   +A+  F  M     I P+  T  S+L A S++  +   +++   ++K  GF+   
Sbjct: 555 HGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSV 614

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
              SC++   G+   L+E++RV+         H N   S+    + H   L L RT+   
Sbjct: 615 DHFSCIVDLLGRSGYLDEAERVIK--SGYFGAHSNICWSLFSACAAHGN-LGLGRTVARL 671

Query: 473 CREV---NGSTFSIVLKACAAMTDLEQG 497
             E    N S + ++   CAA    E+ 
Sbjct: 672 ILERDHNNPSVYVLLSNICAAAGQWEEA 699


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 278/486 (57%), Gaps = 1/486 (0%)

Query: 270 NDFQINEYTMIN-LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            DF     + ++ +L      ++L  GK   A    +G    +   N LI+MY KCG V+
Sbjct: 57  KDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVD 116

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            AR +FD +  +  VSWN+MI   ++NG  N+ALD+   M       + +T++S+L A +
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
              +L +   +H+  IK+   L+  + + L+  Y KC  + ++  V   +  ++ V  ++
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSS 236

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +A+  V    + +AL L+R  W +  + +    S V+ ACA +  + +GK ++ L  K+ 
Sbjct: 237 MAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSG 296

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           +  +IFV S++IDMY KCG IE++ + FR + + ++  WNAM+ G ++H    EV  LF 
Sbjct: 297 FCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFE 356

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           KM + G+ P+++T+++VL++C H GLVR+ + Y   M+  H L P + HY+C+VD L R 
Sbjct: 357 KMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRA 416

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G +  A   I ++P    A +W SLL++C  +GN++L  +A  KL +++P N   Y+LLS
Sbjct: 417 GQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLS 476

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YA+ G W++V K+RK +KE  + KE G SWI +    H F  G+ +H +  EIY +L 
Sbjct: 477 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 536

Query: 749 KLYEHM 754
           ++ + +
Sbjct: 537 EVMDEL 542



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 183/370 (49%), Gaps = 17/370 (4%)

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC- 255
           QI   G+K   L+      +N ++N+Y +CG    A ++FDE+    +VSW+  I +   
Sbjct: 89  QILLMGLKTDLLT------SNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142

Query: 256 --DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             +  EA  L   ++      +E+T+ ++L +   +  L   + + AF  K      V +
Sbjct: 143 NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFV 202

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
             AL+ +Y KCG + DA  +F+ +  +  V+W+SM AGY +N  + QAL +F    E  L
Sbjct: 203 ATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGL 262

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             + + M+S++ A +   ++ +  Q+++ + KSGF  +  + S LI  Y KC  + ES +
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYK 322

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALE---LYRTIWGSCREVNGSTFSIVLKACAA 490
           V  +++K+N V  NA+ S L   S HA +LE   L+  +       N  TF  VL AC  
Sbjct: 323 VFRDVEKRNVVLWNAMISGL---SRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 491 MTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WN 548
           M  + +G+    L  K  +   ++F  S ++D   + G I +A     K+  ++ A  W 
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 549 AMMMGYAQHG 558
           +++     HG
Sbjct: 440 SLLASCRTHG 449



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 186/392 (47%), Gaps = 21/392 (5%)

Query: 87  LVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           ++K C     L + +  H   L +G  + +   +  I  Y+K G +  A   F +     
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHG 200
            V++  M+     NGE +++ ++ ++M+  G   +EF++++VL    A   + E + +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG--- 257
           F +K      V   +  A++++Y +CG   DAV +F+ + +  VV+WS   A        
Sbjct: 190 FAIKAAMDLNV--FVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            +A  LF+       + +++ M +++ +  G   +  GKQ+ A   K GF   + + ++L
Sbjct: 248 EQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSL 307

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I MY KCG + ++  +F  +  ++ V WN+MI+G S +    + + +F  M +  L PN 
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLS 436
            T  S+L A  +   +++  +    + K   L  +    SC++ T  +   + E+  ++S
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 437 EIDKKNAVHINALASVL--VYASCHAEA-LEL 465
           ++        NA AS+   + ASC     LEL
Sbjct: 428 KLP------FNASASMWGSLLASCRTHGNLEL 453



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 177/358 (49%), Gaps = 13/358 (3%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G   D + S  LI+ ++K      A +   +  +R ++++N +I  L +  +   AL L 
Sbjct: 94  GLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLL 153

Query: 70  DRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
            +++ +G     FT SS++ AC +   L E +++H   +K      V++ +  ++ YAK 
Sbjct: 154 LQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G +  A   F    D   V +++M  GYV N  ++++  +F +    GL+ ++F +++V+
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273

Query: 187 GASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            A   +    EG+Q++    K GF S +   + ++++++Y +CG   ++ K+F ++ + +
Sbjct: 274 CACAGLAAMIEGKQMNALLSKSGFCSNI--FVASSLIDMYAKCGGIEESYKVFRDVEKRN 331

Query: 244 VVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VV W+  I+        +E   LF+ ++      N+ T +++LS+ G   ++R G++   
Sbjct: 332 VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFD 391

Query: 301 FCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENG 356
              K   +   V   + ++    + GQ+ +A  +   L F  S S W S++A    +G
Sbjct: 392 LMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 35/275 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++  IK    L+  ++T L+  + K    + A        +R ++T++++ +G  +   
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              AL LF +    GL+ D F  SS++ AC  L    E + ++ +  K GF S +++ S 
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASS 306

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK G I  +   FRD    + V + AM+ G   +    +   +F +M+ +GL  N
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPN 366

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           + +  +VL A                       C H+        VR GQK   +   + 
Sbjct: 367 DVTFVSVLSA-----------------------CGHMG------LVRKGQKYFDLMTKEH 397

Query: 239 ITEPDVVSWS---ERIAAACDGVEAFGLFKDLRFN 270
              P+V  +S   + ++ A    EA+ L   L FN
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFN 432



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 58/94 (61%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ +LL K+G   +  ++++LI  + K      +++   D + R+++ +NA+ISGL+R  
Sbjct: 287 QMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHA 346

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           +S   + LF++++  GL P+  TF S++ ACG +
Sbjct: 347 RSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHM 380


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 198/682 (29%), Positives = 348/682 (51%), Gaps = 17/682 (2%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           DAF +  L++AC SL+    VH    +   ++ ++L +  +  Y + G  + A     + 
Sbjct: 11  DAF-YLHLLRACTSLRHAAAVHAHIARAHPAASLFLRNTLLAAYCRLGGPLPARRLLDEM 69

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGE 196
              + V++  ++  Y   G    S E     R  G++++ FS  A L     +  ++ G 
Sbjct: 70  PRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGR 129

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--- 253
            +H   +  G  SGV   ++N+++++Y +CG+  +A ++FD   E D VSW+  ++    
Sbjct: 130 AVHALAILDGLSSGV--FVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187

Query: 254 ACDGVEAFGLFKDLRFNDFQINEYTMINLLS--SVGGERILRAGKQIQAFCYKVGFMEVV 311
           A    E   +F  +R     +N + + +++   S  G+  +   + +     K G    V
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF------NQALDMF 365
            + +A+I MY K G + +A ++F  +   + V +N+MIAG+            ++AL ++
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLY 307

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             +    + P  +T +S+L A + +  L+   Q+H  +IK  F  DD + S LI  Y   
Sbjct: 308 SEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNS 367

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             + +  R      K + V   A+ S  V    H +AL L+    G+  + +  T S V+
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            ACA++     G+ I C A K+ +D+   + ++ + MY + G ++ A R F+++    + 
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W+A++  +AQHGC  +  + F++M    V P+EIT+L VLT+C H GLV E   Y   M
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +  +GL P ++H  C+VDLLGR G L  A+  I       D  IW+SLL++C I+ +++ 
Sbjct: 548 TKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLER 607

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G L  ++++EL+P + ++YV+L N+Y  AG  +   K R  MK++ + KEPG SWI +  
Sbjct: 608 GQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKC 667

Query: 726 YTHHFYAGDSSHSQSKEIYKEL 747
             H F AGD SH +S  IY +L
Sbjct: 668 GVHSFVAGDKSHPESSAIYTKL 689



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 250/535 (46%), Gaps = 20/535 (3%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L  TL++ + +      A R L +   R+ +++N LI   +R   +  +L+   R R  G
Sbjct: 45  LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +  D F++++ + AC   G L+    VH + +  G SS V++ +  +  Y+K GE+  A 
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F    + D+V++ ++V GYV  G  ++   VF  MR  G+ LN F+L +V+       
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224

Query: 194 EG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +G     E +HG  +K G  S V   L +A++++Y + G  ++A  +F  + EP+VV ++
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDV--FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 249 ERIAAACD---------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
             IA  C            EA  L+ +++    Q  E+T  ++L +      L  GKQI 
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
               K  F E   IG+ALI +Y   G + D    F      D V+W +M++G  +N    
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +AL +F   L   L P+ +T++S++ A ++    +   Q+     KSGF     M +  +
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y +   ++ + R   E++  + V  +A+ S      C  +AL  +  +  +    N  
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 480 TFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
           TF  VL AC+    +++G +    +         I   + V+D+  + G + DA+
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 243/492 (49%), Gaps = 41/492 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L I +G      +S +L+S ++K  +   A R     + RD +++N+L+SG  R   
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC-----GSLQENEIVHGVCLKLGFSSRVYLV 116
               +++F  +R  G+  ++F   S++K C     G++   E VHG  +K G  S V+LV
Sbjct: 191 REEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLV 250

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV-------FVE 169
           S  I+ YAK G +V A   FR   + + V +  M+ G+    E    KEV       + E
Sbjct: 251 SAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRT-ETVIGKEVASEALTLYSE 309

Query: 170 MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           ++S G++  EF+ ++VL A   +  ++ G+QIHG  +K  F     + + +A+++LY   
Sbjct: 310 VQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED--DFIGSALIDLYFNS 367

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL 283
           G   D  + F    + D+V+W+  ++         +A  LF +      + + +T+ +++
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           ++     + RAG+QIQ F  K GF     +GN+ + MY + G V+ A   F  +   D V
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW+++I+ ++++G    AL  F  M++  ++PN  T   +L A S+   + + ++ +  +
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547

Query: 404 IKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            K  G        +C++   G+   L +++  +S     N++              HA+ 
Sbjct: 548 TKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFIS-----NSIF-------------HADP 589

Query: 463 LELYRTIWGSCR 474
           + ++R++  SCR
Sbjct: 590 V-IWRSLLASCR 600



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK     D  + + LI  +         FR    +   DI+T+ A++SG  +  
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNE 399

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               AL LF      GL+PD FT SS++ AC SL   +  E +     K GF     + +
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN 459

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+SG++ +A   F++    D V+++A++  +  +G    +   F EM    +  
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE +   VL A      V EG + +    K   LS    H    +++L  R G+  DA  
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHC-TCVVDLLGRAGRLADAEA 578

Query: 235 MF-DEITEPDVVSWSERIAA 253
              + I   D V W   +A+
Sbjct: 579 FISNSIFHADPVIWRSLLAS 598


>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
 gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
          Length = 779

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 184/701 (26%), Positives = 359/701 (51%), Gaps = 17/701 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ + + G   D   +  LI+ + K      AF+     ++ +++++ ++I   A++ 
Sbjct: 80  KVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYG 139

Query: 61  QSG-PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             G  ++ LF ++  +G+RP+  T  ++++AC +L +   VHG  L+ G S    L +  
Sbjct: 140 HLGRESVLLFRKMELEGIRPNLITMVAVLRAC-NLTDGRQVHGYVLEAGMSLDTSLGNAL 198

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           ++ Y K+G +  A++  R+    D +++  M+ GY  +G+  +       M+  GL   +
Sbjct: 199 VDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTK 258

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            +   +L A     D+ EG+ IH   V +G        + + ++ +Y +CG   D  +  
Sbjct: 259 VTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEV--VKSFLLGMYGKCGSLEDVKRSS 316

Query: 237 DEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
            E+ E + ++W+  I A     D  +A   F+ ++    + +  T + +L +      L 
Sbjct: 317 CEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLA 376

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G  +  +  ++GF E + + N+L +MY KCG ++ AR +F+ +  ++SVSWNS+++   
Sbjct: 377 QGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAI 435

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           ++G    A   F  M      P+  T  S+L+A +   + K+   +H  +++SGF     
Sbjct: 436 QHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTG 495

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           + + LI  Y K      ++ V   + ++N V  N + +  V    + +A+E++   W   
Sbjct: 496 VANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMF---WKMD 552

Query: 474 REVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARYDQ--DIFVESAVIDMYCKCGTIE 530
              +  T+   L AC+ +   L  GK IH   L   +    D    +A+++MY KCG+++
Sbjct: 553 VARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQ 612

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
           +A++ F  +    +  W ++++ YAQH    +   L   M + GVK D++ +L++L+ C 
Sbjct: 613 EARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGCD 672

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           H+GL+ E   Y   M D +G+ P+LEHY CI+D+LGR G L+ A+  +D++P   D+ +W
Sbjct: 673 HSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVW 732

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
            +LL+AC ++GN + G  A  ++  L P   + YV+LSN+Y
Sbjct: 733 MTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 773



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 298/615 (48%), Gaps = 23/615 (3%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
           AL+L+ R++ +G+RPD+ TF + +KAC   G+L +   VH    +LG  + +Y  +  I 
Sbjct: 43  ALELYKRMQLEGVRPDSVTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALIN 102

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK-SKEVFVEMRSLGLELNEF 180
            Y K      A   F      + V++T+++  +   G   + S  +F +M   G+  N  
Sbjct: 103 MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLI 162

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++ AVL A  ++ +G Q+HG+ ++ G    +   L NA++++Y + G   +A  +  E+ 
Sbjct: 163 TMVAVLRAC-NLTDGRQVHGYVLEAGM--SLDTSLGNALVDMYCKTGGVDEADVVLREMP 219

Query: 241 EPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
           + DV+SW+  I   A + D  E       ++ +     + T   LL++   E  L  GK 
Sbjct: 220 KRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKS 279

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           I      +G      + + L+ MYGKCG + D +     +  +++++WN++I  Y+    
Sbjct: 280 IHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSD 339

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-- 415
             QAL  F  M    +  +  T   +L   S+   L Q + +H  I + GF   +S+I  
Sbjct: 340 HFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF---ESIIVH 396

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L   Y KC +L+ ++++  E+  +N+V  N+L S  +   CHA+A + ++ +      
Sbjct: 397 NSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSR 456

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T   +L AC    + ++G +IH + +++ +D+   V +A+I MY K G  E A+  
Sbjct: 457 PDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNV 516

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGL 594
           F  +   +   WN ++  Y + G   +   +F KM    V  D++TY+A L +C   AG 
Sbjct: 517 FDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALDACSGLAGG 573

Query: 595 VREARTYLSCMSDLHGLIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           +   +     M D HG   +L+  A   +V++ G+ G L+ A+   D M +  D   W S
Sbjct: 574 LAHGKLIHGYMLD-HGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGM-LHRDVVTWTS 631

Query: 653 LLSACTIYGNIDLGL 667
           L+ A   +  I+  L
Sbjct: 632 LIVAYAQHSEIEQAL 646



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 220/450 (48%), Gaps = 22/450 (4%)

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINEY 277
           +Y +CG    A ++F ++    V +WS  + A      D V+A  L+K ++    + +  
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           T +  L +   E  L  G+++ A   ++G    +   NALI+MYGKC    DA  +F  +
Sbjct: 61  TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRM 120

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQA 396
              + VSW S+I  +++ G   +   +    +E   I PN  TM ++L A     +L   
Sbjct: 121 ESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDG 176

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            QVH +++++G  LD S+ + L+  Y K   ++E+  VL E+ K++ +  N + S    +
Sbjct: 177 RQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQS 236

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               E L     +          T++ +L AC++  DL +GK+IH   +    D+D  V+
Sbjct: 237 GDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVK 296

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           S ++ MY KCG++ED KR+  ++   +   WN ++  YA++  + +    F +M   GVK
Sbjct: 297 SFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVK 356

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD-----LLGRVGLL 631
            D +T++ +L +C        +  +L+    LH  I QL   + IV      +  + G L
Sbjct: 357 ADAVTFVLMLGTC-------SSPAHLAQGILLHDWISQLGFESIIVHNSLTAMYAKCGSL 409

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           + A+   ++MP   ++  W SL+SA   +G
Sbjct: 410 DAARKMFEEMP-SRNSVSWNSLMSAAIQHG 438



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 43/428 (10%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY--SENGFFNQALDMFCHMLEFSLIPNG 377
           MYGKCG ++ A  +F  L      +W++++  Y  SEN    QAL+++  M    + P+ 
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAV-QALELYKRMQLEGVRPDS 59

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
            T  + L+A +   +L    +VH+HI + G   D    + LI  YGKC +  ++ ++ S 
Sbjct: 60  VTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSR 119

Query: 438 IDKKNAVH-INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           ++  N V   + + +   Y     E++ L+R +       N  T   VL+AC    +L  
Sbjct: 120 MESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTD 175

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G+ +H   L+A    D  + +A++DMYCK G +++A    R++ +  +  WN M+ GYAQ
Sbjct: 176 GRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQ 235

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
            G   E      +M + G+ P ++TY  +L +C     + E ++    + D+ GL     
Sbjct: 236 SGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDM-GLDRDEV 294

Query: 617 HYACIVDLLGRVGLLEGAKMT-------------------------------IDQMP--- 642
             + ++ + G+ G LE  K +                                 QM    
Sbjct: 295 VKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEG 354

Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           +  DA  +  +L  C+   ++  G+L    + +L  ++   +  L+ +YA  G  +   K
Sbjct: 355 VKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESIIVHNSLTAMYAKCGSLDAARK 414

Query: 703 LRKEMKEK 710
           + +EM  +
Sbjct: 415 MFEEMPSR 422


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 169/455 (37%), Positives = 255/455 (56%), Gaps = 3/455 (0%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK I A      F + + + N L+++Y KCG +  AR +FD +  +D V+W ++I G
Sbjct: 31  LNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITG 90

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN--SKSLKQAMQVHSHIIKSGFL 409
           YS++     AL +   ML   L PN +T+AS+L+A S   S  + Q  Q+H   ++ G+ 
Sbjct: 91  YSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYD 150

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            +  +   ++  Y +C+ L E++ +   +  KN V  NAL +         +A  L+  +
Sbjct: 151 SNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNM 210

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                +    T+S VL ACA+M  LEQGK +H L +K       FV + ++DMY K G+I
Sbjct: 211 LRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSI 270

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
           EDAK+ F ++ +  +  WN+M+ GY+QHG        F +M +  + P++IT+L VLT+C
Sbjct: 271 EDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTAC 330

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            HAGL+ E R Y   M   + + PQ+ HY  +VDLLGR G L+ A   I +MPI P A +
Sbjct: 331 SHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAV 389

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +LL AC ++ N++LG  A   + EL      T+VLL N+YA AG WND  K+RK MKE
Sbjct: 390 WGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKE 449

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
             + KEP  SW+ +    H F A D +H Q +EI+
Sbjct: 450 SGVKKEPACSWVEMENEVHVFVADDDAHPQRREIH 484



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 183/367 (49%), Gaps = 13/367 (3%)

Query: 86  SLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           +L+K C     L E +I+H + L   F   + + +  +  YAK G++V A   F +    
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQ 197
           D V +TA++ GY  +     +  +  EM  +GL+ N+F+L ++L A     S DV +G Q
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-- 255
           +HG  ++ G+ S V  +++ AI+++Y RC    +A  +FD +   + VSW+  IA     
Sbjct: 140 LHGLCLRYGYDSNV--YVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 256 -DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
             G +AF LF ++   + +   +T  ++L +      L  GK + A   K G   V  +G
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N L+ MY K G + DA+ +FD L  +D VSWNSM+ GYS++G    AL  F  ML   + 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN  T   +L A S++  L +       + K       S    ++   G+   L+ + + 
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377

Query: 435 LSEIDKK 441
           +SE+  K
Sbjct: 378 ISEMPIK 384



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 178/362 (49%), Gaps = 14/362 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++LL+ +    D ++  TL++ + K  D   A +   +  +RD++T+ ALI+G ++  +
Sbjct: 37  IHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDR 96

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLV 116
              AL L   +   GL+P+ FT +SL+KA   +   ++     +HG+CL+ G+ S VY+ 
Sbjct: 97  PQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVS 156

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              ++ YA+   +  A++ F   +  + V++ A++ GY   G+ DK+  +F  M    ++
Sbjct: 157 CAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVK 216

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              F+ ++VL A      +++G+ +H   +K G    +   + N ++++Y + G   DA 
Sbjct: 217 PTHFTYSSVLCACASMGSLEQGKWVHALMIKWG--EKLVAFVGNTLLDMYAKSGSIEDAK 274

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FD + + DVVSW+  +        G  A   F+++       N+ T + +L++     
Sbjct: 275 KVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAG 334

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           +L  G+       K      +S    ++ + G+ G ++ A      +  K + + W +++
Sbjct: 335 LLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394

Query: 350 AG 351
             
Sbjct: 395 GA 396



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 166/334 (49%), Gaps = 8/334 (2%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           ++L+  ++   L +   +H+ ++ S F  D  M + L+  Y KC  L  ++++  E+  +
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM--TDLEQGKA 499
           + V   AL +         +AL L   +     + N  T + +LKA + +  TD+ QG+ 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +H L L+  YD +++V  A++DMY +C  +E+A+  F  +   +   WNA++ GYA+ G 
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL-HGLIPQLEHY 618
             +   LF+ M +  VKP   TY +VL +C   G + + +   + M      L+  + + 
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN- 258

Query: 619 ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ- 677
             ++D+  + G +E AK   D++    D   W S+L+  + +G   + L    ++L  + 
Sbjct: 259 -TLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
             N+ T++ +    + AG+  D G+   +M +K+
Sbjct: 317 APNDITFLCVLTACSHAGLL-DEGRHYFDMMKKY 349



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 18/273 (6%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +LK C  +  L +GK IH L L +R+  D+ +++ ++++Y KCG +  A++ F ++    
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           +  W A++ GY+QH    +   L  +M + G+KP++ T  ++L +    G      T + 
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVG-----STDVL 135

Query: 604 CMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
               LHGL  +  + +       I+D+  R   LE A++  D M +  +   W +L++  
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM-VSKNEVSWNALIAGY 194

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN-DVGKLRKEMKEKFLCKEP 716
              G  D      S +L  +    + +   S L A A M + + GK    +  K+  K  
Sbjct: 195 ARKGQGDKAFCLFSNMLR-ENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLV 253

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
            +    VG      YA   S   +K+++  L K
Sbjct: 254 AF----VGNTLLDMYAKSGSIEDAKKVFDRLAK 282


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 197/588 (33%), Positives = 300/588 (51%), Gaps = 44/588 (7%)

Query: 173 LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           LG +  E     +  +S      + +H   V  G +  +   ++  ++NLY   G    +
Sbjct: 13  LGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSI--FISTRLVNLYANLGDVSLS 70

Query: 233 VKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRF-NDFQINEYTMINLLSSVGG 288
              FD+I + DV +W+  I+A        EA G F  L   ++ + + YT   +L + G 
Sbjct: 71  RCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG- 129

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  G++I  + +K+GF   V +  +LI MY + G    ARS+FD + F+D  SWN+M
Sbjct: 130 --TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 187

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I+G  +NG   QALD+   M               LE                  IK  F
Sbjct: 188 ISGLIQNGNAAQALDVLDEMR--------------LEG-----------------IKMNF 216

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
           +   S++   +  Y K   L+ + +V   I  K+ +  N L +        +EA+E+Y+ 
Sbjct: 217 VTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKM 276

Query: 469 IWGSCREV--NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           +   C+E+  N  T+  +L A A +  L+QG  IH   +K     D+FV + +ID+Y KC
Sbjct: 277 M-EECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 335

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G + DA   F ++ ++S   WNA++  +  HG   +   LF +M   GVKPD +T++++L
Sbjct: 336 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 395

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C H+G V E +     M + +G+ P L+HY C+VDLLGR G LE A   I  MP+ PD
Sbjct: 396 SACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD 454

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
           A IW +LL AC I+GNI+LG  A  +L E+   N   YVLLSN+YA+ G W  V K+R  
Sbjct: 455 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 514

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            +E+ L K PG+S I V      FY G+ SH + KEIY+EL  L   M
Sbjct: 515 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKM 562



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 197/435 (45%), Gaps = 41/435 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           +++LL+  G      +ST L++ +    D   + R  FD    +D+  +N++IS      
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLS-RCTFDQIPQKDVYAWNSMISAYVHNG 96

Query: 61  QSGPALKLFDRLR-YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
               A+  F +L     +RPD +TF  ++KACG+L +   +H    KLGF   V++ +  
Sbjct: 97  HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASL 156

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I  Y++ G    A   F D    D  ++ AM+ G + NG   ++ +V  EMR  G+++N 
Sbjct: 157 IHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNF 216

Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            ++ ++L    D                              +Y + G    A K+F+ I
Sbjct: 217 VTVVSILPVFVD------------------------------MYAKLGLLDSAHKVFEII 246

Query: 240 TEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
              DV+SW+  I        A + +E + + ++ +  +   N+ T +++L +      L+
Sbjct: 247 PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK--EIIPNQGTWVSILPAYAHVGALQ 304

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G +I     K      V +   LI +YGKCG++ DA S+F  +  + SV+WN++I+ + 
Sbjct: 305 QGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHG 364

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
            +G   + L +F  ML+  + P+  T  S+L A S+S  +++       + + G      
Sbjct: 365 IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK 424

Query: 414 MISCLITTYGKCNAL 428
              C++   G+   L
Sbjct: 425 HYGCMVDLLGRAGYL 439



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 161/362 (44%), Gaps = 44/362 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
           +I+    K G   +  ++ +LI  +++F  F    R LFD    RD+ ++NA+ISGL + 
Sbjct: 136 KIHCWAFKLGFQWNVFVAASLIHMYSRFG-FTGIARSLFDDMPFRDMGSWNAMISGLIQN 194

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             +  AL + D +R +G                            +K+ F + V ++  F
Sbjct: 195 GNAAQALDVLDEMRLEG----------------------------IKMNFVTVVSILPVF 226

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LELN 178
           ++ YAK G + SA   F      D +++  ++ GY  NG   ++ EV+  M     +  N
Sbjct: 227 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 286

Query: 179 EFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + +  ++L A   V   ++G +IHG  +K      V   +   ++++Y +CG+ +DA+ +
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDV--FVATCLIDVYGKCGRLVDAMSL 344

Query: 236 FDEITEPDVVSWSERIAAACDGV-----EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           F ++ +   V+W+  I  +C G+     +   LF ++     + +  T ++LLS+     
Sbjct: 345 FYQVPQESSVTWNAII--SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSG 402

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMI 349
            +  GK       + G    +     ++ + G+ G +  A   I D  +  D+  W +++
Sbjct: 403 FVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 462

Query: 350 AG 351
             
Sbjct: 463 GA 464


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 175/544 (32%), Positives = 291/544 (53%), Gaps = 5/544 (0%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDG-VEAFGLFKDLRFND 271
           L   ++  Y   G   +A  +FDE+ E DVV+W+  IA   +C+    A+ +F ++   +
Sbjct: 45  LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG-QVNDA 330
              N +T+ ++L +  G + L  G+ +     K G    + + NAL+ MY  C   ++DA
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
             +F  +  K+ VSW ++IAGY+        L +F  ML   +  N ++ +  + A ++ 
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
            S     Q+H+ + K GF  +  +++ ++  Y +C+  +E+ R   E+++++ +  N L 
Sbjct: 225 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI 284

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +    ++   E+L ++  +       N  TF+ ++ ACA +  L  G+ IH   ++   D
Sbjct: 285 AGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLD 343

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM 570
            ++ + +A+IDMY KCG I D+ + F  + R  L  W AMM+GY  HG   E   LF+KM
Sbjct: 344 GNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKM 403

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGL 630
            + G++PD + ++A+L++C HAGLV E   Y   M   + + P  E Y C+VDLLGR G 
Sbjct: 404 VRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGK 463

Query: 631 LEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           +E A   I+ MP  PD  +W   L AC  +   +LG LA  ++L+L+P    TYV+LSN+
Sbjct: 464 VEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNI 523

Query: 691 YASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           YA+ G W +  +LRK MK     KE G SW+ VG + + F  GD   S+ + IY+ L  L
Sbjct: 524 YAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENL 583

Query: 751 YEHM 754
             HM
Sbjct: 584 IGHM 587



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 212/437 (48%), Gaps = 14/437 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
           +L+TTLI  +        A R LFD    RD++ +  +I+G         A  +F  +  
Sbjct: 44  VLATTLIKSYFGKGLIGEA-RTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102

Query: 75  QGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSG-EIV 130
           + L P+AFT SS++KAC     L    +VHG+ +K G    +Y+ +  ++ YA     + 
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A M FR     + V++T ++ GY    +      VF +M    +ELN FS +  + A  
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
            +     GEQ+H    K GF S +   + N+I+++Y RC    +A + F E+ + D+++W
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNL--PVMNSILDMYCRCSCFSEANRYFYEMNQRDLITW 280

Query: 248 SERIAA--ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
           +  IA     +  E+  +F  +    F  N +T  +++++      L  G+QI     + 
Sbjct: 281 NTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRR 340

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           G    +++ NALI MY KCG + D+  +F  +  +D VSW +M+ GY  +G+  +A+++F
Sbjct: 341 GLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELF 400

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGK 424
             M+   + P+     +IL A S++  + + ++    ++       D  +  C++   G+
Sbjct: 401 DKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGR 460

Query: 425 CNALNESKRVLSEIDKK 441
              + E+  ++  +  K
Sbjct: 461 AGKVEEAYELIESMPFK 477



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 206/431 (47%), Gaps = 21/431 (4%)

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           L +  I++Y   G I  A   F +  + D VA+T M+ GY        +  VF EM +  
Sbjct: 45  LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104

Query: 175 LELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL- 230
           L+ N F++++VL A   +K    G  +HG  +K G L G   +++NA+M++Y  C   + 
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG-LDGFI-YVDNALMDMYATCCVSMD 162

Query: 231 DAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTM---INLLS 284
           DA  +F  I   + VSW+  IA      DG     +F+ +   + ++N ++    +   +
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           S+G       G+Q+ A   K GF   + + N+++ MY +C   ++A   F  +  +D ++
Sbjct: 223 SIGSHTF---GEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLIT 279

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN++IAGY E     ++L +F  M      PN +T  SI+ A +    L    Q+H  II
Sbjct: 280 WNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRII 338

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           + G   + ++ + LI  Y KC  + +S +V   + +++ V   A+           EA+E
Sbjct: 339 RRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVE 398

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL---KARYDQDIFVESAVID 521
           L+  +  S    +   F  +L AC+    +++G     L +       DQ+I+    V+D
Sbjct: 399 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIY--GCVVD 456

Query: 522 MYCKCGTIEDA 532
           +  + G +E+A
Sbjct: 457 LLGRAGKVEEA 467



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 11/261 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ + K+G   +  +  +++  + + + F  A R+ ++   RD+IT+N LI+G  R  
Sbjct: 232 QLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER-- 289

Query: 61  QSGP--ALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYL 115
            S P  +L +F  +  +G  P+ FTF+S++ AC +L      + +HG  ++ G    + L
Sbjct: 290 -SNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLAL 348

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y+K G I  +   F      D V++TAM+ GY  +G  +++ E+F +M   G+
Sbjct: 349 SNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGI 408

Query: 176 ELNEFSLTAVLGA-SFDVKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             +     A+L A S      E +  F + VG +       +   +++L  R G+  +A 
Sbjct: 409 RPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAY 468

Query: 234 KMFDEIT-EPDVVSWSERIAA 253
           ++ + +  +PD   W   + A
Sbjct: 469 ELIESMPFKPDECVWGPFLGA 489


>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 163/431 (37%), Positives = 248/431 (57%), Gaps = 13/431 (3%)

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVS 388
           A+ +FD +   +  +WN++I  Y+ +   +Q+L +F  ML  S   P+ +T   +++A S
Sbjct: 88  AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
             + L      H  +IK     D  +++ LI  Y KC  L    RV     +++ V  N+
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNS 207

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           + +  V   C  EALEL++ +     + NG T   VL ACA  +D E G+ +H    + R
Sbjct: 208 MITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR 267

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ------------ 556
             + + + +A++DMY KCG++EDAKR F K+    +  W  M++GYA+            
Sbjct: 268 IXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAM 327

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           HG   +   LF+KM +  VKP+ +T+  +L +C H GLV E RT+ + M  ++G++P ++
Sbjct: 328 HGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVK 387

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HYAC+VD+LGR GLLE A   I++MP+ P A +W +LL ACTI+ N+ L   A S+L+EL
Sbjct: 388 HYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIEL 447

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
           +P N   YVLLSN+YA AG W+ V  LRK M++  L KEPG S I V G  H F  GD+S
Sbjct: 448 EPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNS 507

Query: 737 HSQSKEIYKEL 747
           H  +K+IY +L
Sbjct: 508 HPSAKKIYAKL 518



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 175/377 (46%), Gaps = 28/377 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH--FTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           QI++ +++ G   DP  ++ LI+    + F     A +      + ++ T+N LI   A 
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYAS 112

Query: 59  FCQSGPALKLFDRLRYQGLR-PDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
                 +L +F R+ +Q    PD FTF  L+KA   L+E    +  HG+ +K+   S V+
Sbjct: 113 SSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVF 172

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           +++  I  YAK GE+      F +    D V++ +M+  +V  G  +++ E+F EM +  
Sbjct: 173 ILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQN 232

Query: 175 LELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++ N  ++  VL A     D + G  +H +  +      +   L+NA++++Y +CG   D
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLT--LSNAMLDMYTKCGSVED 290

Query: 232 AVKMFDEITEPDVVSWS---------------ERIAAACDGVEAFGLFKDLRFNDFQINE 276
           A ++FD++ E D+VSW+               + +A    G +A  LF  ++ +  + N 
Sbjct: 291 AKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNA 350

Query: 277 YTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
            T  N+L +     ++  G+          G +  V     ++ + G+ G + +A  + +
Sbjct: 351 VTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIE 410

Query: 336 YLIFKDSVS-WNSMIAG 351
            +    + S W +++  
Sbjct: 411 KMPMAPAASVWGALLGA 427



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 12/288 (4%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT--TYGKCNALNESKRVLSEID 439
           S+++  S +K LKQ   +H+ ++++G   D    S LIT        +L+ +++V  +I 
Sbjct: 40  SLIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 440 KKNAVHINALASVLVYASC---HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
             N    N L  +  YAS    H   L   R +  S    +  TF  ++KA + + +L  
Sbjct: 97  HPNLYTWNTL--IRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           GKA H + +K     D+F+ +++I  Y KCG +    R F    R  +  WN+M+  + Q
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQ 214

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
            GC  E   LF +M    VKP+ IT + VL++C         R ++    + + +   L 
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR-WVHSYIERNRIXESLT 273

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID 664
               ++D+  + G +E AK   D+MP   D   W ++L      G  D
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVGYAKIGEYD 320



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 172/382 (45%), Gaps = 41/382 (10%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDL--RFNDFQINEYTMINLLSSV 286
           A ++FD+I  P++ +W+  I   A++ +  ++  +F  +  +  DF  +++T   L+ + 
Sbjct: 88  AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFP-DKFTFPFLIKAA 146

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GK       KV     V I N+LI  Y KCG++     +F     +D VSWN
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWN 206

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           SMI  + + G   +AL++F  M   ++ PNG TM  +L A +     +    VHS+I ++
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN 266

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL----ASVLVYASCHA-- 460
                 ++ + ++  Y KC ++ ++KR+  ++ +K+ V    +    A +  Y +     
Sbjct: 267 RIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLA 326

Query: 461 ------EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDI 513
                 +A+ L+  +     + N  TF+ +L AC+ +  +E+G+   + + L       +
Sbjct: 327 MHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGV 386

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM--------------------- 551
              + ++D+  + G +E+A     K+     A  W A++                     
Sbjct: 387 KHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIE 446

Query: 552 MGYAQHGCYHEVSNLFNKMSKF 573
           +    HG Y  +SN++ K  K+
Sbjct: 447 LEPGNHGAYVLLSNIYAKAGKW 468


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 169/527 (32%), Positives = 283/527 (53%), Gaps = 25/527 (4%)

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD++ + DV+SW+  I+    +G+     G++K + +    ++  T+I++L     
Sbjct: 66  ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK + +   K  F   ++  N L+ MY KCG ++ A  +F+ +  ++ VSW SM
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 185

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY+ +G+ + A+ +   M +  +  +   + SIL A + S SL     VH +I  +  
Sbjct: 186 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 245

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + + L+  Y KC ++  +  V S +  K+ +  N +   L               
Sbjct: 246 ASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL--------------- 290

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                 + +  T + +L ACA+++ LE+GK IH   L+  Y  D  V +A++D+Y KCG 
Sbjct: 291 ------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 344

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  A+  F  I    L  W  M+ GY  HG  +E    FN+M   G++PDE++++++L +
Sbjct: 345 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 404

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GL+ +   +   M +   + P+LEHYAC+VDLL R G L  A   I+ +PI PDA 
Sbjct: 405 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDAT 464

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW +LL  C IY +I+L      ++ EL+P+N   YVLL+N+YA A  W +V ++R+++ 
Sbjct: 465 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIG 524

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAG-DSSHSQSKEIYKELIKLYEHM 754
           +K L K PG SWI + G  + F +G +SSH  SK+I   L K+   M
Sbjct: 525 KKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKM 571



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 219/449 (48%), Gaps = 55/449 (12%)

Query: 21  LISHFTKFADFRRA---FRF----------------LFDTQ-NRDIITYNALISGLARFC 60
           ++S + K  DF+ +   F+                 LFD   +RD+I++N++ISG     
Sbjct: 33  MVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMISGYVSNG 92

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   L ++ ++ Y G+  D  T  S++  C   G+L   + VH + +K  F  R+   +
Sbjct: 93  LTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSN 152

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++  A   F    + + V++T+M+ GY  +G  D +  +  +M   G++L
Sbjct: 153 TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKL 212

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCGQKLD 231
           +  ++T++L A   S  +  G+ +H + +K   ++    VC    NA+M++Y +CG    
Sbjct: 213 DVVAITSILHACARSGSLDNGKDVHDY-IKANNMASNLFVC----NALMDMYAKCGSMEG 267

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           A  +F  +   D++SW+  +                   + + +  TM  +L +      
Sbjct: 268 ANSVFSTMVVKDIISWNTMVG------------------ELKPDSRTMACILPACASLSA 309

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK+I  +  + G+     + NAL+ +Y KCG +  AR +FD +  KD VSW  MIAG
Sbjct: 310 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 369

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G+ N+A+  F  M +  + P+  +  SIL A S+S  L+Q  +   +I+K+ F ++
Sbjct: 370 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIE 428

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
             +   +C++    +   L+++ + +  +
Sbjct: 429 PKLEHYACMVDLLSRTGNLSKAYKFIETL 457



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 241/535 (45%), Gaps = 65/535 (12%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV--------------- 130
           S    CG L+E   V     K      VYL +  +  YAK G+                 
Sbjct: 4   SFYATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE 59

Query: 131 -----SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
                SA   F    D D +++ +M+ GYV NG  ++   ++ +M  LG++++  ++ +V
Sbjct: 60  GKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 119

Query: 186 L---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L     S  +  G+ +H   +K  F   +  + +N ++++Y +CG    A+++F+++ E 
Sbjct: 120 LVGCAKSGTLSLGKAVHSLAIKSSFERRI--NFSNTLLDMYSKCGDLDGALRVFEKMGER 177

Query: 243 DVVSWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           +VVSW+  IA    DG    A  L + +     +++   + ++L +      L  GK + 
Sbjct: 178 NVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH 237

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
            +         + + NAL+ MY KCG +  A S+F  ++ KD +SWN+M+          
Sbjct: 238 DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG--------- 288

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
                        L P+  TMA IL A ++  +L++  ++H +I+++G+  D  + + L+
Sbjct: 289 ------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 336

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC  L  ++ +   I  K+ V    + +         EA+  +  +  +  E +  
Sbjct: 337 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 396

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFR 537
           +F  +L AC+    LEQG     + +K  ++ +  +E  + ++D+  + G +  A +   
Sbjct: 397 SFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIE 455

Query: 538 --KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLAVLTS 588
              I  D+   W A++ G      YH++  L  K+++  F ++P+   Y  +L +
Sbjct: 456 TLPIAPDATI-WGALLCGCR---IYHDIE-LAEKVAERVFELEPENTGYYVLLAN 505



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 172/435 (39%), Gaps = 91/435 (20%)

Query: 317 LISMYGKCGQVNDARSIFDYL--------------------------IFK---------- 340
           L+S Y  CG + + R +FD +                          +FK          
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 341 ---------------DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
                          D +SWNSMI+GY  NG   + L ++  M+   +  +  T+ S+L 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
             + S +L     VHS  IKS F    +  + L+  Y KC  L+ + RV  ++ ++N V 
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
             ++ +          A+ L + +     +++    + +L ACA    L+ GK +H    
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
                 ++FV +A++DMY KCG++E A   F  +    +  WN M            V  
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM------------VGE 289

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI-----PQLEHYA- 619
           L         KPD  T   +L +C     +   +       ++HG I         H A 
Sbjct: 290 L---------KPDSRTMACILPACASLSALERGK-------EIHGYILRNGYSSDRHVAN 333

Query: 620 CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI--YGNIDLGLLAGSKLLELQ 677
            +VDL  + G+L  A++  D +P   D   W  +++   +  YGN  +      +   ++
Sbjct: 334 ALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 392

Query: 678 PDNESTYVLLSNLYA 692
           PD  S    +S LYA
Sbjct: 393 PDEVS---FISILYA 404



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 167/359 (46%), Gaps = 30/359 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++SL IK+        S TL+  ++K  D   A R       R+++++ ++I+G  R   
Sbjct: 135 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGW 194

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           S  A+ L  ++  +G++ D    +S++ AC   GSL   + VH        +S +++ + 
Sbjct: 195 SDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNA 254

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A   F   +  D +++  MV             E+  + R++   L 
Sbjct: 255 LMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------------GELKPDSRTMACIL- 301

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
                A L A   ++ G++IHG+ ++ G+ S    H+ NA+++LYV+CG    A  +FD 
Sbjct: 302 --PACASLSA---LERGKEIHGYILRNGYSSD--RHVANALVDLYVKCGVLGLARLLFDM 354

Query: 239 ITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D+VSW+  IA       G EA   F ++R    + +E + I++L +     +L  G
Sbjct: 355 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 414

Query: 296 KQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
            +   +  K  F     + +   ++ +  + G ++ A    + L I  D+  W +++ G
Sbjct: 415 WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 175/544 (32%), Positives = 284/544 (52%), Gaps = 30/544 (5%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINE 276
           N +M  ++  G   DA+ +F E+            A+AC                   ++
Sbjct: 87  NVLMRAFLHAGHPEDALHLFIEMLH---------AASACPA-----------------DQ 120

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +T    L S      L  G+ +QA+  K G +    + ++LI MY  CG V  AR +FD 
Sbjct: 121 HTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDA 180

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
                 V WN+++A Y +NG + + ++MF  MLE  +  +  T+ S++ A       K  
Sbjct: 181 AEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLG 240

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             V  H+ + G   +  +++ L+  Y KC  + +++R+   +  ++ V  +A+ S    A
Sbjct: 241 KWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQA 300

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EAL L+  +  +  E N  T   VL ACA +  LE GK +H    + R      + 
Sbjct: 301 DQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG 360

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++D Y KCG I+DA  AF  +   +   W A++ G A +G   E   LF+ M + G++
Sbjct: 361 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIE 420

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P ++T++ VL +C H+ LV E R +   M+  +G+ P++EHY C+VDLLGR GL++ A  
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  MPI P+A IW++LLS+C ++ N+ +G  A  +++ L P +   YVLLSN+YASAG 
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           W D   +RKEMK++ + K PG S I + G    F+A DS H + +EIY+++    E M+ 
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKV----EEMIG 596

Query: 757 TAKL 760
             K+
Sbjct: 597 RIKV 600



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 182/400 (45%), Gaps = 23/400 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           + +  +K G   D  + ++LI  +    D   A R +FD  +   ++ +NA+++   +  
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAA-RLVFDAAEESGVVMWNAIVAAYLKNG 200

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                +++F  +   G+  D  T  S+V ACG + + ++   V G   + G +    LV+
Sbjct: 201 DWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVT 260

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAK GEI  A   F      D VA++AM+ GY    +  ++  +F EM+   +E 
Sbjct: 261 ALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEP 320

Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N+ ++ +VL A      ++ G+ +H + V+   LS +   L  A+++ Y +CG   DAV+
Sbjct: 321 NDVTMVSVLSACAVLGALETGKWVHSY-VRRKRLS-LTTILGTALVDFYAKCGCIDDAVE 378

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
            F+ +   +  +W+  I   A    G EA  LF  +R    +  + T I +L +     +
Sbjct: 379 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCL 438

Query: 292 LRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMI 349
           +  G++   +     G    V     ++ + G+ G V++A      + I  ++V W +++
Sbjct: 439 VEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALL 498

Query: 350 ---AGYSENGFFNQALDMF-----CHMLEFSLIPNGYTMA 381
              A +   G   +AL         H  ++ L+ N Y  A
Sbjct: 499 SSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASA 538



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 23/297 (7%)

Query: 8   KNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           + G   +P L T L+  + K  +  +A R     Q+RD++ ++A+ISG  +  Q   AL 
Sbjct: 249 EEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALG 308

Query: 68  LFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA 124
           LF  ++   + P+  T  S++ AC   G+L+  + VH    +   S    L +  ++ YA
Sbjct: 309 LFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYA 368

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K G I  A   F      ++  +TA++ G   NG   ++ E+F  MR  G+E  + +   
Sbjct: 369 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIG 428

Query: 185 VLGA---SFDVKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           VL A   S  V+EG +        +G+K       C      +++L  R G   +A +  
Sbjct: 429 VLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGC------MVDLLGRAGLVDEAYQFI 482

Query: 237 DEIT-EPDVVSWSERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMI-NLLSSVG 287
             +  EP+ V W   +++       G+    L + +  N     +Y ++ N+ +S G
Sbjct: 483 RTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAG 539


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 179/544 (32%), Positives = 287/544 (52%), Gaps = 13/544 (2%)

Query: 225 RCGQKLDAVKMFDE-ITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMI 280
           R  ++ +   +F+  + + DV SW+  IA    + D  EA   F  +R         +  
Sbjct: 21  RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
             + +      + +GKQ     +  G+   + + +ALI MY  CG++ DAR +FD +  +
Sbjct: 81  CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHML------EFSLIPNGYTMASILEAVSNSKSLK 394
           D VSW SMI GY  NG    A+ +F  +L      + ++  +   + S++ A S   +  
Sbjct: 141 DIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKRVLSEIDKKNAVHINALASV 452
               +HS +IK GF    S+ + L+  Y K     +  ++++  +I  K+ V  N++ SV
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260

Query: 453 LVYASCHAEALELYRT-IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
              +    EA E++R  +       N  T S VL A +    L  GK IH   ++   + 
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+ V +++IDMYCKCG +E A++AF ++   ++  W AM+ GY  HG   +   LF  M 
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             GV+P+ IT+++VL +C HAGL  E   + + M    G+ P LEHY C+VDLLGR G L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A   I +M + PD+ IW SLL+AC I+ N++L  ++ ++L EL   N   Y+LLS++Y
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 500

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A AG W DV ++R  MK + L K PG+S + + G  H F  GD  H Q ++IY+ L +L 
Sbjct: 501 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560

Query: 752 EHMV 755
             ++
Sbjct: 561 RKLL 564



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 185/364 (50%), Gaps = 20/364 (5%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVH 101
           D+ ++N++I+ LAR   S  AL  F  +R   L P   +F   +KAC SL +    +  H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
                 G+ S +++ S  I  Y+  G++  A   F +    D V++T+M+ GY  NG   
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159

Query: 162 KSKEVFVEM------RSLGLELNEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVC 212
            +  +F ++          + L+   L +V+ A   V      E IH F +K GF  GV 
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 213 NHLNNAIMNLYVRCGQKLDAV--KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
             + N +++ Y + G+   AV  K+FD+I + D VS++  ++  A  G+  EAF +F+ L
Sbjct: 220 --VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 268 RFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
             N     N  T+  +L +V     LR GK I     ++G  + V +G ++I MY KCG+
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           V  AR  FD +  K+  SW +MIAGY  +G   +AL++F  M++  + PN  T  S+L A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397

Query: 387 VSNS 390
            S++
Sbjct: 398 CSHA 401



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 212/409 (51%), Gaps = 24/409 (5%)

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIH 199
           D  ++ +++     +G+  ++   F  MR L L     S    + A    FD+  G+Q H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACD 256
                 G+ S +   +++A++ +Y  CG+  DA K+FDEI + D+VSW+  I       +
Sbjct: 100 QQAFVFGYQSDI--FVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGN 157

Query: 257 GVEAFGLFKDLRFNDFQINEYTMIN---LLSSVGG-ERILRAG--KQIQAFCYKVGFMEV 310
            ++A  LFKDL  ++   ++   ++   L+S +    R+   G  + I +F  K GF   
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217

Query: 311 VSIGNALISMYGKCGQ--VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
           VS+GN L+  Y K G+  V  AR IFD ++ KD VS+NS+++ Y+++G  N+A ++F  +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 369 LEFSLIP-NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCN 426
           ++  ++  N  T++++L AVS+S +L+    +H  +I+ G L DD ++ + +I  Y KC 
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCG 336

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            +  +++    +  KN     A+ +        A+ALEL+  +  S    N  TF  VL 
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396

Query: 487 ACA-AMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
           AC+ A   +E  +  +  A+K R+  +  +E    ++D+  + G ++ A
Sbjct: 397 ACSHAGLHVEGWRWFN--AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 29/271 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAF-RFLFDT-QNRDIITYNALISGLARF 59
           I+S +IK G      +  TL+  + K  +   A  R +FD   ++D ++YN+++S  A+ 
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 60  CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
             S  A ++F RL + + +  +A T S+++ A    G+L+  + +H   +++G    V +
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y K G + +A   F    + +  ++TAM+ GY  +G   K+ E+F  M   G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 176 ELNEFSLTAVLGAS------------FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             N  +  +VL A             F+  +G     FGV+ G     C      +++L 
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----FGVEPGLEHYGC------MVDLL 434

Query: 224 VRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
            R G    A  +   +  +PD + WS  +AA
Sbjct: 435 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 185/521 (35%), Positives = 277/521 (53%), Gaps = 5/521 (0%)

Query: 243 DVVSWSERIAA-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           +VVSW+  I+  A +G  +  L  F ++R      N++T      +V   R+   GKQI 
Sbjct: 22  NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 81

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A   K G +  V +G +   MY K    +DAR +FD +  ++  +WN+ I+    +G   
Sbjct: 82  ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 141

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A++ F         PN  T  + L A S+   L   MQ+H  +++SGF  D S+ + LI
Sbjct: 142 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 201

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             YGKC  +  S+ + +E+  KNAV   +L +  V      +A  LY        E +  
Sbjct: 202 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 261

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             S VL ACA M  LE G++IH  A+KA  ++ IFV SA++DMY KCG IED+++AF ++
Sbjct: 262 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 321

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV--KPDEITYLAVLTSCCHAGLVRE 597
              +L   N+++ GYA  G       LF +M+  G    P+ +T++++L++C  AG V  
Sbjct: 322 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 381

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
                  M   +G+ P  EHY+CIVD+LGR G++E A   I +MPI P   +W +L +AC
Sbjct: 382 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 441

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
            ++G   LGLLA   L +L P +   +VLLSN +A+AG W +   +R+E+K   + K  G
Sbjct: 442 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 501

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
           YSWI V    H F A D SH  +KEI   L KL   M A  
Sbjct: 502 YSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAG 542



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 14/447 (3%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y+K     SA +  R     + V++T+++ G   NG F  +   F EMR  G+  N+F+ 
Sbjct: 2   YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61

Query: 183 TAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
                A   ++    G+QIH   VK G +  V   +  +  ++Y +   + DA K+FDEI
Sbjct: 62  PCAFKAVASLRLPVTGKQIHALAVKCGRILDV--FVGCSAFDMYCKTRLRDDARKLFDEI 119

Query: 240 TEPDVVSWSERIA-AACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
            E ++ +W+  I+ +  DG   EA   F + R  D   N  T    L++      L  G 
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
           Q+     + GF   VS+ N LI  YGKC Q+  +  IF  +  K++VSW S++A Y +N 
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              +A  ++    +  +  + + ++S+L A +    L+    +H+H +K+       + S
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299

Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI--WGSCR 474
            L+  YGKC  + +S++   E+ +KN V  N+L     +      AL L+  +   G   
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDA 532
             N  TF  +L AC+    +E G  I   ++++ Y  +   E  S ++DM  + G +E A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 533 KRAFRKI-CRDSLAGWNAMMMGYAQHG 558
               +K+  + +++ W A+      HG
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHG 445



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 14/418 (3%)

Query: 41  TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---EN 97
           T  R+++++ +LISGLA+      AL  F  +R +G+ P+ FTF    KA  SL+     
Sbjct: 18  TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 77

Query: 98  EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWN 157
           + +H + +K G    V++     + Y K+     A   F +  + +   + A +   V +
Sbjct: 78  KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 137

Query: 158 GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNH 214
           G   ++ E F+E R +    N  +  A L A  D   +  G Q+HG  ++ GF + V   
Sbjct: 138 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV--S 195

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFND 271
           + N +++ Y +C Q   +  +F E+   + VSW   +AA     E   A  L+   R + 
Sbjct: 196 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 255

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
            + +++ + ++LS+  G   L  G+ I A   K      + +G+AL+ MYGKCG + D+ 
Sbjct: 256 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 315

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL--IPNGYTMASILEAVSN 389
             FD +  K+ V+ NS+I GY+  G  + AL +F  M        PN  T  S+L A S 
Sbjct: 316 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375

Query: 390 SKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
           + +++  M++   +  + G        SC++   G+   +  +   + ++  +  + +
Sbjct: 376 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 433



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 185/411 (45%), Gaps = 26/411 (6%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY K      AR +      ++ VSW S+I+G ++NG F+ AL  F  M    ++PN +T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
                +AV++ +      Q+H+  +K G +LD  +       Y K    ++++++  EI 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 440 KKNAVHINALASVLVYASCHAEALEL---YRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           ++N    NA  S  V      EA+E    +R I G     N  TF   L AC+    L  
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG---HPNSITFCAFLNACSDWLHLNL 177

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G  +H L L++ +D D+ V + +ID Y KC  I  ++  F ++   +   W +++  Y Q
Sbjct: 178 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 237

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           +    + S L+ +  K  V+  +    +VL++C     +   R+  +     H +   +E
Sbjct: 238 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA-----HAVKACVE 292

Query: 617 HY----ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
                 + +VD+ G+ G +E ++   D+MP   +     SL+      G +D+ L   + 
Sbjct: 293 RTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMAL---AL 348

Query: 673 LLELQP------DNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
             E+ P       N  T+V L +  + AG   +  K+   M+  +   EPG
Sbjct: 349 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGI-EPG 398



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 17/362 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           QI++L +K G  LD  +  +    + K    R   R LFD    R++ T+NA IS     
Sbjct: 79  QIHALAVKCGRILDVFVGCSAFDMYCK-TRLRDDARKLFDEIPERNLETWNAFISNSVTD 137

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLV 116
            +   A++ F   R     P++ TF + + AC     L     +HG+ L+ GF + V + 
Sbjct: 138 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 197

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +G I+ Y K  +I S+E+ F +    + V++ ++V  YV N E +K+  +++  R   +E
Sbjct: 198 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 257

Query: 177 LNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++F +++VL A      ++ G  IH   VK      +   + +A++++Y +CG   D+ 
Sbjct: 258 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI--FVGSALVDMYGKCGCIEDSE 315

Query: 234 KMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDL--RFNDFQINEYTMINLLSSVGG 288
           + FDE+ E ++V+ +  I       +   A  LF+++  R      N  T ++LLS+   
Sbjct: 316 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375

Query: 289 ERILRAGKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WN 346
              +  G +I  +     G        + ++ M G+ G V  A      +  + ++S W 
Sbjct: 376 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 435

Query: 347 SM 348
           ++
Sbjct: 436 AL 437


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 185/620 (29%), Positives = 330/620 (53%), Gaps = 22/620 (3%)

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVG 206
           M+   V  G   ++ E++ EM   G+  ++F +T+++ A   ++   EG ++H   +  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGL 263
           F + +   L  A++ +Y +CG   DA ++F+ +   D+ +WS  IAA   A  G  A  L
Sbjct: 61  FRTDI--PLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVL 118

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
           ++ +     + N  T    L        L  G+ I          +   + ++L++MY K
Sbjct: 119 YRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLK 178

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMAS 382
           C ++ +AR +F+ +  ++  S+ +MI+ Y + G   +AL++F  M +   I PN YT A+
Sbjct: 179 CDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFAT 238

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           IL AV    +L++  +VH H+   GF  +  + + L+T YGKC +  E+++V   +  +N
Sbjct: 239 ILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN 298

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +   ++ +         EAL L++ +     E +G +FS  L ACA +  L++G+ IH 
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRMDV---EPSGVSFSSALNACALLGALDEGREIHH 355

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYH 561
             ++A       +E++++ MY +CG+++DA+R F ++  RD+ +  NAM+  + QHG   
Sbjct: 356 RVVEANLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFS-CNAMIAAFTQHGRKK 413

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           +   ++ KM + G+  D IT+++VL +C H  LV + R +L  +   HG++P +EHY C+
Sbjct: 414 QALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCM 473

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
           VD+LGR G L  A+  ++ MP   DA  W +LLS C  +G++D G  A  K+ EL P   
Sbjct: 474 VDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAET 533

Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS- 740
             YV LSN+YA+A  ++D  ++RKEM+E+ + +    S+I +    H F +G     Q  
Sbjct: 534 LPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEG 593

Query: 741 ------KEIYKELIKLYEHM 754
                 + +   L++L E M
Sbjct: 594 HDGRTMERVRSLLVELLEPM 613



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 229/450 (50%), Gaps = 20/450 (4%)

Query: 52  LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLG 108
           +I+   R  +   AL+L+  +  +G+  D F  +SLV AC  LQ   E   +H   +  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 109 FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
           F + + L +  ++ YAK G +  A+  F      D  A+++++  Y   G  + +  ++ 
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 169 EMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLY 223
            M + G+E N  +    LG    V    +G  IH    +    S V     L ++++N+Y
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIH----QRILASKVPQDDVLQDSLLNMY 176

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDL-RFNDFQINEYTM 279
           ++C + ++A K+F+ +   +V S++  I+A   A +  EA  LF  + +    + N YT 
Sbjct: 177 LKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTF 236

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
             +L +V G   L  G+++       GF   V + NAL++MYGKCG   +AR +FD +  
Sbjct: 237 ATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA 296

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           ++ +SW SMIA Y+++G   +AL++F  M    + P+G + +S L A +   +L +  ++
Sbjct: 297 RNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREI 353

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  ++++  L    M + L++ Y +C +L++++RV + +  ++A   NA+ +        
Sbjct: 354 HHRVVEAN-LASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRK 412

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACA 489
            +AL +YR +       +G TF  VL AC+
Sbjct: 413 KQALRIYRKMEQEGIPADGITFVSVLVACS 442



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 216/446 (48%), Gaps = 17/446 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++  LI  G   D  L T L+  + K      A R     + +D+  ++++I+  AR  
Sbjct: 51  RLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAG 110

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
           +   A+ L+ R+  +G+ P+  TF+  +  C S   L +   +H   L         L  
Sbjct: 111 RGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQD 170

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-GLE 176
             +  Y K  E+V A   F      +  +YTAM+  YV  GE  ++ E+F  M  +  +E
Sbjct: 171 SLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIE 230

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N ++   +LGA     ++++G ++H      GF + V   + NA++ +Y +CG  ++A 
Sbjct: 231 PNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVV--VQNALVTMYGKCGSPVEAR 288

Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FD +T  +V+SW+  IAA     +  EA  LFK +      ++  + +N  + +G   
Sbjct: 289 KVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVEPSGVSFSSALNACALLGA-- 346

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G++I     +        +  +L+SMY +CG ++DAR +F+ +  +D+ S N+MIA
Sbjct: 347 -LDEGREIHHRVVEANLAS-PQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIA 404

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFL 409
            ++++G   QAL ++  M +  +  +G T  S+L A S++  +      + S ++  G +
Sbjct: 405 AFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVV 464

Query: 410 LDDSMISCLITTYGKCNALNESKRVL 435
                  C++   G+   L +++ ++
Sbjct: 465 PLVEHYLCMVDVLGRSGRLGDAEELV 490


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 199/655 (30%), Positives = 325/655 (49%), Gaps = 47/655 (7%)

Query: 143 DNVAYTAMVCGYV----WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV------ 192
           D V+Y +++        W    D  +++  E R    +++ F+L +VL A   +      
Sbjct: 132 DAVSYNSLISALCLFRQWERALDALRDMLAEGRH---DVSSFTLVSVLLACSHLPGDDGR 188

Query: 193 KEGEQIHGFGVKVGFL-SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP------DVV 245
           + G + H F +K GFL  G      NA++++Y R G   DA  +F            DVV
Sbjct: 189 RLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVV 248

Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
           +W+  I+    G    EA  +  D+     + +  T  + L +     +L  G+++ A  
Sbjct: 249 TWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVV 308

Query: 303 YKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVS---WNSMIAGYSENGFF 358
            K   +   S + +AL+ MY    +V  AR +FD ++ + S     WN+MI GY++ G  
Sbjct: 309 LKDADLAANSFVASALVDMYAGNEKVASARRVFD-MVPEPSRQLGMWNAMICGYAQAGMD 367

Query: 359 NQALDMFCHM-LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
            +AL++F  M  E    P+  TM+ +L A + S+       +H +++K G   +  + + 
Sbjct: 368 EEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNA 427

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR---------- 467
           L+  Y +   ++ ++R+ + ID ++ V  N L +  V     AEA +L            
Sbjct: 428 LMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPS 487

Query: 468 ----TIWGSCRE--VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
               T  G       N  T   +L  CAA+    +GK IH  A++   + DI V SA++D
Sbjct: 488 SSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVD 547

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEI 580
           MY KCG +  ++  F ++ R ++  WN ++M Y  HG   E   LF++M+  G   P+E+
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T++A L +C H+GLV         M   HG+ P  + +AC+VD+LGR G L+ A   I  
Sbjct: 608 TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITS 667

Query: 641 M-PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           M P       W SLL AC ++ N++LG +A  +L EL+P   S YVLL N+Y++AGMW+ 
Sbjct: 668 MEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDK 727

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
              +R  M+ + + KEPG SWI + G  H F AG+SSH  S E++  +  L+E M
Sbjct: 728 SVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERM 782



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 208/446 (46%), Gaps = 34/446 (7%)

Query: 39  FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE 98
           F     D++T+N +IS L +  +   A+++   +   G+RPD  TF+S + AC  L+   
Sbjct: 240 FSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLA 299

Query: 99  I---VHGVCLK-LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV--AYTAMVC 152
           +   +H V LK    ++  ++ S  ++ YA + ++ SA   F    +       + AM+C
Sbjct: 300 LGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMIC 359

Query: 153 GYVWNGEFDKSKEVFVEMRS-LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFL 208
           GY   G  +++ E+F  M +  G   +E +++ VL A   S      E +HG+ VK G  
Sbjct: 360 GYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMA 419

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFK 265
                 + NA+M++Y R G+   A ++F  I   DVVSW+  I          EAF L  
Sbjct: 420 GN--RFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVT 477

Query: 266 DLRFNDFQI----------------NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
           +++                      N  T++ LL           GK+I  +  +     
Sbjct: 478 EMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALES 537

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            +++G+AL+ MY KCG +  +R++FD L  ++ ++WN +I  Y  +G  ++A+ +F  M 
Sbjct: 538 DIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMA 597

Query: 370 E-FSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNA 427
                 PN  T  + L A S+S  + + +++ H      G      + +C++   G+   
Sbjct: 598 AGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGR 657

Query: 428 LNESKRVLSEIDKKNAVHINALASVL 453
           L+E+  +++ ++      ++A +S+L
Sbjct: 658 LDEAYSIITSMEPGEQ-QVSAWSSLL 682



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 123/533 (23%), Positives = 223/533 (41%), Gaps = 46/533 (8%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD--AFTFSSLVKACGSLQENE--- 98
           RD ++YN+LIS L  F Q   AL     +  +G R D  +FT  S++ AC  L  ++   
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEG-RHDVSSFTLVSVLLACSHLPGDDGRR 189

Query: 99  ---IVHGVCLKLGF---SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL------DNVA 146
                H   LK GF       +  +  +  YA+ G +  A+  FR           D V 
Sbjct: 190 LGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVT 249

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGV 203
           +  M+   V  G   ++ EV  +M SLG+  +  +  + L A   ++    G ++H   +
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP--DVVSWSERI---AAACDGV 258
           K   L+   + + +A++++Y    +   A ++FD + EP   +  W+  I   A A    
Sbjct: 310 KDADLA-ANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDE 368

Query: 259 EAFGLFKDLRFN-DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           EA  LF  +        +E TM  +L +          + +  +  K G      + NAL
Sbjct: 369 EALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNAL 428

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML-------- 369
           + MY + G+++ AR IF  +  +D VSWN++I G    G   +A  +   M         
Sbjct: 429 MDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSS 488

Query: 370 --------EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
                       +PN  T+ ++L   +   +  +  ++H + ++     D ++ S L+  
Sbjct: 489 SSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDM 548

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI-WGSCREVNGST 480
           Y KC  L  S+ V   + ++N +  N L           EA+ L+  +  G     N  T
Sbjct: 549 YAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVT 608

Query: 481 FSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
           F   L AC+    +++G +  H +           + + V+D+  + G +++A
Sbjct: 609 FIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEA 661



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 113/282 (40%), Gaps = 36/282 (12%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  ++K G   +  +   L+  + +  +   A R       RD++++N LI+G      
Sbjct: 409 MHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGH 468

Query: 62  SGPALKLFDRLRYQGLR----------------PDAFTFSSLVKACGSL---QENEIVHG 102
           +  A +L   ++                     P+  T  +L+  C +L      + +HG
Sbjct: 469 AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHG 528

Query: 103 VCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK 162
             ++    S + + S  ++ YAK G + ++   F      + + +  ++  Y  +G  D+
Sbjct: 529 YAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDE 588

Query: 163 SKEVFVEMRSLG-LELNEFSLTAVLGA---SFDVKEG-EQIHGF----GVKVGFLSGVCN 213
           +  +F EM + G    NE +  A L A   S  V  G E  HG     GVK         
Sbjct: 589 AVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVK------PTP 642

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFD--EITEPDVVSWSERIAA 253
            L+  ++++  R G+  +A  +    E  E  V +WS  + A
Sbjct: 643 DLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 185/580 (31%), Positives = 296/580 (51%), Gaps = 46/580 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDL-----R 268
           NA+++         D   +F  + + D VS++  IA    G     A  L+  L      
Sbjct: 76  NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
               +I    M+ + +S  G+R L  G+Q      ++GF     +G+ L+ MY K G + 
Sbjct: 136 VRPSRITMSAMV-MAASALGDRAL--GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIG 192

Query: 329 DARSIFD-------------------------------YLIFKDSVSWNSMIAGYSENGF 357
           DA+ +FD                                +  +D ++W +M+ G+++NG 
Sbjct: 193 DAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGL 252

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-- 415
            +QAL+ F  M    +  + YT  SIL A     +L+Q  Q+H++II++ +  DD++   
Sbjct: 253 ESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHY--DDNVFVG 310

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           S L+  Y KC ++  ++     +  KN +   AL        C  EA+ ++  +     +
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            +  T   V+ +CA +  LE+G   HCLAL +     I V +A++ +Y KCG+IEDA R 
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F ++       W A++ GYAQ G   E  +LF KM    VKPD +T++ VL++C  AG V
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
            +  +Y   M   HG++P  +HY C++DL  R G L+ A+  I QMP+ PDA  W +LLS
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
           AC + G++++G  A   LLE+ P N ++YVLL +++A+ G WN V +LR+ M+++ + KE
Sbjct: 551 ACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKE 610

Query: 716 PGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           PG SWI      H F A D SH  SK IY++L  L   M+
Sbjct: 611 PGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKML 650



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 219/460 (47%), Gaps = 51/460 (11%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQG--LRPDAFTFSSLVKACGSLQENEI- 99
            RD ++YNA+I+G +       A++L+  L   G  +RP   T S++V A  +L +  + 
Sbjct: 100 QRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALG 159

Query: 100 --VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD------------------- 138
              H   L+LGF    ++ S  +  YAK G I  A+  F +                   
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRC 219

Query: 139 ------------CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
                         D D + +T MV G+  NG   ++   F  MR  G+ +++++  ++L
Sbjct: 220 KMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSIL 279

Query: 187 ---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
              GA   +++G+QIH + ++  +   V   + +A++++Y +C     A   F  ++  +
Sbjct: 280 TACGALSALEQGKQIHAYIIRTHYDDNV--FVGSALVDMYSKCRSIKPAETAFRRMSCKN 337

Query: 244 VVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           ++SW+  I       C   EA  +F +++ +    +++T+ +++SS      L  G Q  
Sbjct: 338 IISWTALIVGYGQNGCSE-EAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
                 G M  +++ NAL+++YGKCG + DA  +FD ++F D VSW +++ GY++ G   
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCL 418
           + +D+F  ML   + P+G T   +L A S +  +++     HS     G +  D   +C+
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM 516

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           I  Y +   L E++    E  K+  +H +A+    + ++C
Sbjct: 517 IDLYSRSGRLKEAE----EFIKQMPMHPDAIGWGTLLSAC 552



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 215/454 (47%), Gaps = 51/454 (11%)

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA---VLGASF--DVKEGEQ 197
           D V+Y A++ G+   G   ++  ++  +   G  +    +T    V+ AS   D   G Q
Sbjct: 102 DTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQ 161

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI------------------ 239
            H   +++GF  GV   + + ++ +Y + G   DA ++FDE+                  
Sbjct: 162 FHCQILRLGF--GVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRC 219

Query: 240 -------------TEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLL 283
                        T+ D ++W+  +     +G+E  A   F+ +RF    I++YT  ++L
Sbjct: 220 KMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSIL 279

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           ++ G    L  GKQI A+  +  + + V +G+AL+ MY KC  +  A + F  +  K+ +
Sbjct: 280 TACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNII 339

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW ++I GY +NG   +A+ +F  M    + P+ +T+ S++ + +N  SL++  Q H   
Sbjct: 340 SWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLA 399

Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
           + SG +   ++ + L+T YGKC ++ ++ R+  E+   + V   AL +         E +
Sbjct: 400 LVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETI 459

Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFV----ESA 518
           +L+  +     + +G TF  VL AC+    +E+G    H +    + D  I       + 
Sbjct: 460 DLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSM----QKDHGIVPIDDHYTC 515

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLA-GWNAMM 551
           +ID+Y + G +++A+   +++     A GW  ++
Sbjct: 516 MIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 172/347 (49%), Gaps = 13/347 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           ++  T+I+   +      A R      +RD IT+  +++G  +      AL  F R+R+Q
Sbjct: 207 VMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQ 266

Query: 76  GLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+  D +TF S++ ACG+L   ++ + +H   ++  +   V++ S  ++ Y+K   I  A
Sbjct: 267 GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPA 326

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
           E  FR     + +++TA++ GY  NG  +++  VF EM+  G++ ++F+L +V+ +  + 
Sbjct: 327 ETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANL 386

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++EG Q H   +  G +  +   ++NA++ LY +CG   DA ++FDE+   D VSW+ 
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYIT--VSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTA 444

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFCYKV 305
            +          E   LF+ +   D + +  T I +LS+      +  G     +     
Sbjct: 445 LVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDH 504

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
           G + +      +I +Y + G++ +A      + +  D++ W ++++ 
Sbjct: 505 GIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 198/682 (29%), Positives = 348/682 (51%), Gaps = 17/682 (2%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           DAF +  L++AC SL+    VH    +   ++ ++L +  +  Y + G  + A     + 
Sbjct: 11  DAF-YLHLLRACTSLRHAAAVHAHIARAHPAASLFLRNTLLAAYCRLGGPLPARRLLDEM 69

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGE 196
              + V++  ++  Y   G    S E     R  G++++ FS  A L     +  ++ G 
Sbjct: 70  PRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGR 129

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--- 253
            +H   +  G  SGV   ++N+++++Y +CG+  +A ++FD   E D VSW+  ++    
Sbjct: 130 AVHALAILDGLSSGV--FVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187

Query: 254 ACDGVEAFGLFKDLRFNDFQINEYTMINLLS--SVGGERILRAGKQIQAFCYKVGFMEVV 311
           A    E   +F  +R     +N + + +++   S  G+  +   + +     K G    V
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF------NQALDMF 365
            + +A+I MY K G + +A ++F  +   + V +N+MIAG+            ++AL ++
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLY 307

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             +    + P  +T +S+L A + +  L+   Q+H  +IK  F  DD + S LI  Y   
Sbjct: 308 SEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNS 367

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
             + +  R      K + V   A+ S  V    H +AL L+    G+  + +  T S V+
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            ACA++     G+ I C A K+ +D+   + ++ + MY + G ++ A R F+++    + 
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W+A++  +AQHGC  +  + F++M    V P+EIT+L VLT+C H GLV E   Y   M
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +  +GL P ++H  C+VDLLGR G L  A+  I       D  IW+SLL++C I+ +++ 
Sbjct: 548 NKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLER 607

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G L  ++++EL+P + ++YV+L N+Y  AG  +   K R  MK++ + KEPG SWI +  
Sbjct: 608 GQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKC 667

Query: 726 YTHHFYAGDSSHSQSKEIYKEL 747
             H F AGD SH +S  IY +L
Sbjct: 668 GVHSFVAGDKSHPESSAIYTKL 689



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 252/536 (47%), Gaps = 22/536 (4%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L  TL++ + +      A R L +   R+ +++N LI   +R   +  +L+   R R  G
Sbjct: 45  LRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAG 104

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           +  D F++++ + AC   G L+    VH + +  G SS V++ +  +  Y+K GE+  A 
Sbjct: 105 VDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEAR 164

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             F    + D+V++ ++V GYV  G  ++   VF  MR  G+ LN F+L +V+       
Sbjct: 165 RVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRG 224

Query: 194 EG-----EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +G     E +HG  +K G  S V   L +A++++Y + G  ++A  +F  + EP+VV ++
Sbjct: 225 DGTMDIAEAVHGCVIKAGLDSDV--FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 249 ERIAAACD---------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
             IA  C            EA  L+ +++    Q  E+T  ++L +      L  GKQI 
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
               K  F E   IG+ALI +Y   G + D    F      D V+W +M++G  +N    
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +AL +F   L   L P+ +T++S++ A ++    +   Q+     KSGF     M +  +
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y +   ++ + R   E++  + V  +A+ S      C  +AL  +  +  +    N  
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
           TF  VL AC+    +++G   +   +   Y     ++  + V+D+  + G + DA+
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYY-ETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAE 577



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 228/454 (50%), Gaps = 22/454 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L I +G      +S +L+S ++K  +   A R     + RD +++N+L+SG  R   
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC-----GSLQENEIVHGVCLKLGFSSRVYLV 116
               +++F  +R  G+  ++F   S++K C     G++   E VHG  +K G  S V+LV
Sbjct: 191 REEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLV 250

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV-------FVE 169
           S  I+ YAK G +V A   FR   + + V +  M+ G+    E    KEV       + E
Sbjct: 251 SAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRT-ETVIGKEVASEALTLYSE 309

Query: 170 MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           ++S G++  EF+ ++VL A   +  ++ G+QIHG  +K  F     + + +A+++LY   
Sbjct: 310 VQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED--DFIGSALIDLYFNS 367

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL 283
           G   D  + F    + D+V+W+  ++         +A  LF +      + + +T+ +++
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           ++     + RAG+QIQ F  K GF     +GN+ + MY + G V+ A   F  +   D V
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW+++I+ ++++G    AL  F  M++  ++PN  T   +L A S+   + + ++ +  +
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547

Query: 404 IKS-GFLLDDSMISCLITTYGKCNALNESKRVLS 436
            K  G        +C++   G+   L +++  +S
Sbjct: 548 NKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFIS 581



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 8/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  +IK     D  + + LI  +         FR    +   DI+T+ A++SG  +  
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNE 399

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               AL LF      GL+PD FT SS++ AC SL   +  E +     K GF     + +
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN 459

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  YA+SG++ +A   F++    D V+++A++  +  +G    +   F EM    +  
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NE +   VL A      V EG + +    K   LS    H    +++L  R G+  DA  
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHC-TCVVDLLGRAGRLADAEA 578

Query: 235 MFDE-ITEPDVVSWSERIAA 253
                I   D V W   +A+
Sbjct: 579 FISNGIFHADPVIWRSLLAS 598


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 169/524 (32%), Positives = 288/524 (54%), Gaps = 8/524 (1%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAF-----GLFKDLRFNDFQINEYTMINLLSSV 286
           A K+FD+  +PDV  W+  +   C     F      ++  ++      + ++   +L + 
Sbjct: 126 ARKLFDKFPDPDVFLWNAIVR--CYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKAC 183

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  G+++    ++ GF   V + N L+++Y KCG++  A ++F  L+ +  VSW 
Sbjct: 184 SALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWT 243

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+I+GY++NG   +AL +F  M + ++ P+   + S+L A ++ + L+    +H  +IK 
Sbjct: 244 SIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKM 303

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           G   +  ++  L + Y KC  +  ++   ++++  + +  NA+ S  V      EA+EL+
Sbjct: 304 GLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELF 363

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           R +       +  T +  + ACA +  LE  + +      + +  D+ V +++ID Y KC
Sbjct: 364 RLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKC 423

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G+++ A+  F +I    +  W+AMM+GY  HG   E   LF+ M + GV P+++T++ +L
Sbjct: 424 GSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLL 483

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           T+C ++GLV E       M D +G+ P+ +HYAC+VDLLGR G L+ A   +  MPI P 
Sbjct: 484 TACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPG 542

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             +W +LLSAC I+ ++ LG  A  +L  L P N   YV LSNLYAS+ +W+ V K+R  
Sbjct: 543 VSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVL 602

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           M+EK L K  GYS I + G    F AGD +H +SKEI++E+  L
Sbjct: 603 MREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDL 646



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 220/442 (49%), Gaps = 15/442 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           QIY+ L+  G      L   L++  +   +   A R LFD   + D+  +NA++   +R 
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCA-RKLFDKFPDPDVFLWNAIVRCYSRH 151

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
              G A++++ R++   + PD F+F  ++KAC +L   E+   VHG   + GF S V++ 
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +G +  YAK GEIV A   F   +D   V++T+++ GY  NG+  ++  +F EMR   + 
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDA 232
            +  +L +VL A  DV++   G+ IHG  +K+G     C   L  ++ +LY +CG  + A
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGL---ECEFDLLISLTSLYAKCGHVMVA 328

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
              F+++  P ++ W+  I+         EA  LF+ ++  + + +  T+ + +++    
Sbjct: 329 RLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQI 388

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   + +  +     F   V +  +LI  Y KCG V+ AR +FD +  KD V W++M+
Sbjct: 389 GSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMM 448

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
            GY  +G   +++ +F  M +  + PN  T   +L A  NS  +++   +   +   G  
Sbjct: 449 VGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIE 508

Query: 410 LDDSMISCLITTYGKCNALNES 431
                 +C++   G+   L+ +
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRA 530



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 139/287 (48%), Gaps = 8/287 (2%)

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           Q+++ ++ +G      +I+ L+        ++ ++++  +    +    NA+        
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
               A+E+Y  +  +C   +G +F  VLKAC+A+  LE G+ +H    +  ++ D+FV++
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
            ++ +Y KCG I  A   F ++   ++  W +++ GYAQ+G   E   +F++M K  V+P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D I  ++VL +      +   ++   C+  + GL  + +    +  L  + G +  A++ 
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKM-GLECEFDLLISLTSLYAKCGHVMVARLF 331

Query: 638 IDQMPIPPDAHIWQSLLSACTIYG----NIDLGLLAGSKLLELQPDN 680
            +Q+   P    W +++S     G     I+L  L  SK   ++PD+
Sbjct: 332 FNQVE-NPSLIFWNAMISGYVKNGYAEEAIELFRLMKSK--NIRPDS 375


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 162/484 (33%), Positives = 262/484 (54%), Gaps = 28/484 (5%)

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
           RF+D+        + ++     R LR G+Q+ A     G+   + +   L+ MY +CG +
Sbjct: 34  RFHDYD-------DAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGAL 86

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            DAR++ D +  ++ VSW +MI+GYS+N   +QA ++F  ML                  
Sbjct: 87  EDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLR----------------- 129

Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
                + Q  QVH+  +K+ F L   + S L+  Y K   + E++RV   +  ++ V   
Sbjct: 130 ---AGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYT 186

Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
           A+ S         EAL+L+R ++    + N  TF+ +L A + ++ ++ GK +H L L+ 
Sbjct: 187 AILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRR 246

Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
                + +++++IDMY KCG +  ++R F  +   S+  WNAM+MGY +HG  HEV  LF
Sbjct: 247 ELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLF 306

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
             M    VKPD +T LAVL+   H GLV E       +      +   EHY C++DLLGR
Sbjct: 307 RSMCD-EVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGR 365

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L+ A   I++MP  P   IW SLL AC ++ N+ +G     KLL+++P+N   YV+L
Sbjct: 366 SGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVIL 425

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+YA+AGMW DV ++RK M +K + KEPG SW+ +    H F++ +  H + ++I  ++
Sbjct: 426 SNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKI 485

Query: 748 IKLY 751
            ++Y
Sbjct: 486 KEIY 489



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/505 (22%), Positives = 222/505 (43%), Gaps = 74/505 (14%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           +L+E   VH   +  G+   +YL +  +  YA+ G +  A        + + V++TAM+ 
Sbjct: 50  ALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMIS 109

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVC 212
           GY  N   D++ E+F+ M   G                 + + +Q+H F VK  F   + 
Sbjct: 110 GYSQNERPDQAWELFIMMLRAG-----------------IHQVKQVHAFAVKTNF--ELH 150

Query: 213 NHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRF 269
             + ++++++Y +     +A ++FD +   DVVS++  ++         EA  LF+ L  
Sbjct: 151 MFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYN 210

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
              Q N+ T   LL+++ G   +  GKQ+     +      +++ N+LI MY KCG++  
Sbjct: 211 EGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLY 270

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           +R +FD +  +  VSWN+M+ GY  +G  ++ + +F  M +  + P+  T+ ++L   S+
Sbjct: 271 SRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSH 329

Query: 390 SKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
              + + + +  HI+K    LL+     C+I   G+   L ++  ++ ++          
Sbjct: 330 GGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKM---------- 379

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
                          +  R IWGS           +L AC   T++  G+ +      A+
Sbjct: 380 -------------PFQPTRAIWGS-----------LLGACRVHTNVHVGEFV------AQ 409

Query: 509 YDQDIFVESA-----VIDMYCKCGTIEDAKRAFRKICRDSL---AGWNAMMMGYAQHGCY 560
              DI  E+A     + ++Y   G  +D  R  + + + ++    G + M++    H  +
Sbjct: 410 KLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIH-TF 468

Query: 561 HEVSNLFNKMSKFGVKPDEITYLAV 585
           H       +      K  EI Y+A+
Sbjct: 469 HSCERFHPRKEDINAKIKEI-YVAI 492



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 171/367 (46%), Gaps = 44/367 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++  G+     L+T L+  + +      A   L     R+++++ A+ISG +   
Sbjct: 56  QVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYS--- 112

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
                         Q  RPD      ++     + + + VH   +K  F   +++ S  +
Sbjct: 113 --------------QNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLL 158

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
           + YAKS  I  A   F      D V+YTA++ GY   G  +++ ++F  + + G++ N+ 
Sbjct: 159 DMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQV 218

Query: 181 SLTAVLGA-----SFDVKEGEQIHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           + TA+L A     S D   G+Q+HG  ++  + F       L N+++++Y +CG+ L + 
Sbjct: 219 TFTALLNALSGLSSMDY--GKQVHGLILRRELPFFMA----LQNSLIDMYSKCGKLLYSR 272

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++FD + E  VVSW+  +      G+  E   LF+ +  ++ + +  T++ +LS      
Sbjct: 273 RVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-CDEVKPDSVTLLAVLSGYSHGG 331

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNA-----LISMYGKCGQVNDARSIFDYLIFKDSVS- 344
           ++  G  +     K    E  ++ N      +I + G+ GQ+  A ++ + + F+ + + 
Sbjct: 332 LVDEGLDMFDHIVK----EQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAI 387

Query: 345 WNSMIAG 351
           W S++  
Sbjct: 388 WGSLLGA 394


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 189/679 (27%), Positives = 347/679 (51%), Gaps = 13/679 (1%)

Query: 87  LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
           L++ C S      +H  CLK+G +   ++V+     YA+   +  A   F +        
Sbjct: 10  LLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGL---ELNEFSLTAVLGASFDVKE---GEQIHG 200
           + A++  Y   G++ ++  +F +M +  +     + ++++  L +   +++   G+ IHG
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHG 129

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE 259
           F  K    + +   + +A++ LY +CGQ  DAVK+F E  + DVV W+  I     +G  
Sbjct: 130 FLKKKKIDNDM--FVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSP 187

Query: 260 AFGLF---KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
              L    + +       +  T+++  S+         G+ +  F  + GF   + + N+
Sbjct: 188 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 247

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           ++++YGK G +  A ++F  + +KD +SW+SM+A Y++NG    AL++F  M++  +  N
Sbjct: 248 ILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 307

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T+ S L A ++S +L++   +H   +  GF LD ++ + L+  Y KC +   +  + +
Sbjct: 308 RVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFN 367

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            + KK+ V    L S         ++L ++  +       +      +L A + +  ++Q
Sbjct: 368 RMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQ 427

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
              +H    K+ +D + F+ +++I++Y KC +I++A + F+ + R  +  W++++  Y  
Sbjct: 428 ALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGF 487

Query: 557 HGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
           HG   E   LF +MS    VKP+++T++++L++C HAGL+ E       M + + L+P  
Sbjct: 488 HGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNT 547

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHY  +VDLLGR+G L+ A   I++MP+    H+W +LL AC I+ NI +G LA   L  
Sbjct: 548 EHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFL 607

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           L P++   Y LLSN+Y     W+D  KLR  +KE    K  G S + +    H F A D 
Sbjct: 608 LDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDR 667

Query: 736 SHSQSKEIYKELIKLYEHM 754
            H +S +IY  L KL   M
Sbjct: 668 FHGESDQIYGMLRKLDARM 686



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 271/548 (49%), Gaps = 19/548 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S  +K G   D  + T L   + ++A    A +   +T  + +  +NAL+       
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 61  QSGPALKLFDRLRYQGL---RPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
           +    L LF ++    +   RPD +T S  +K+C  LQ+ E+   +HG   K    + ++
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  IE Y+K G++  A   F +    D V +T+++ GY  NG  + +   F  M  L 
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 201

Query: 175 LELNEFSLTAVLGASF-----DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            +++   +T V  AS      D   G  +HGF  + GF + +C  L N+I+NLY + G  
Sbjct: 202 -QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLC--LANSILNLYGKTGSI 258

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACD-GVE--AFGLFKDLRFNDFQINEYTMINLLSSV 286
             A  +F E+   D++SWS  +A   D G E  A  LF ++     ++N  T+I+ L + 
Sbjct: 259 RSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRAC 318

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                L  GK I       GF   +++  AL+ MY KC    +A  +F+ +  KD VSW 
Sbjct: 319 ASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWA 378

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
            + +GY+E G  +++L +FC+ML +   P+   +  IL A S    ++QA+ +H+ + KS
Sbjct: 379 VLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKS 438

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL- 465
           GF  ++ + + LI  Y KC++++ + +V   + +K+ V  +++ +   +     EAL+L 
Sbjct: 439 GFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLF 498

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYC 524
           Y+    S  + N  TF  +L AC+    +E+G K  H +  + +   +      ++D+  
Sbjct: 499 YQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLG 558

Query: 525 KCGTIEDA 532
           + G ++ A
Sbjct: 559 RMGELDKA 566



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 227/457 (49%), Gaps = 14/457 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  L K     D  + + LI  ++K      A +   +   +D++ + ++I+G  +   
Sbjct: 127 IHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGS 186

Query: 62  SGPALKLFDRL-RYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
              AL  F R+   + + PD  T  S   AC  L +  +   VHG   + GF +++ L +
Sbjct: 187 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLAN 246

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K+G I SA   FR+    D +++++MV  Y  NG    +  +F EM    +EL
Sbjct: 247 SILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIEL 306

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N  ++ + L A   S +++EG+ IH   V  GF   +   ++ A+M++Y++C    +A+ 
Sbjct: 307 NRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDIT--VSTALMDMYMKCFSPKNAID 364

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F+ + + DVVSW+   +   +     ++ G+F ++     + +   ++ +L++     I
Sbjct: 365 LFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGI 424

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           ++    + AF  K GF     IG +LI +Y KC  +++A  +F  +  KD V+W+S+IA 
Sbjct: 425 VQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAA 484

Query: 352 YSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFL 409
           Y  +G   +AL +F  M   S + PN  T  SIL A S++  +++ +++ H  + +   +
Sbjct: 485 YGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLM 544

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +      ++   G+   L+++  +++E+  +   H+
Sbjct: 545 PNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHV 581


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 190/615 (30%), Positives = 313/615 (50%), Gaps = 13/615 (2%)

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-- 191
           M  R         +  M+     NG F ++  ++  M   G+  N  +   +L A  +  
Sbjct: 1   MSLRPSFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLP 60

Query: 192 -VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
            ++ G  +HG  +K+GF +     +  A++++Y +C     A ++FDE+ +  VVSW+  
Sbjct: 61  SIQHGTMLHGHVLKLGFQAD--TFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAM 118

Query: 251 IAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS---SVGGERILRAGKQIQAFCYK 304
           ++A        +A  L K++    F+    T +++LS   ++        GK I     K
Sbjct: 119 VSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIK 178

Query: 305 VGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           +G + + VS+ N+L+ MY +   +++AR +FD +  K  +SW +MI GY + G   +A  
Sbjct: 179 LGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYG 238

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M   S+  +     +++      + L  A  VHS ++K G    D + + LIT Y 
Sbjct: 239 LFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYA 298

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  L  ++R+   I +K+ +   ++ +  V+     EAL+L+R +  +    NG+T + 
Sbjct: 299 KCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLAT 358

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           V+ ACA +  L  G+ I         + D  V++++I MY KCG+I  A+  F ++    
Sbjct: 359 VVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKD 418

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREARTYL 602
           L  W +M+  YA HG  +E  +LF+KM+   G+ PD I Y +V  +C H+GLV E   Y 
Sbjct: 419 LTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYF 478

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             M    G+ P +EH  C++DLLGRVG L+ A   I  MP    A +W  LLSAC I+GN
Sbjct: 479 KSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGN 538

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           ++LG LA  +LL+  P +  +YVL++NLY S G W +   +R  M  K L KE G+S + 
Sbjct: 539 VELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVE 598

Query: 723 VGGYTHHFYAGDSSH 737
           V    H F  G+ S 
Sbjct: 599 VTDTYHTFAVGNQSQ 613



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 254/544 (46%), Gaps = 25/544 (4%)

Query: 31  FRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
            R +FR       R + T+N +I            L ++  + + G+  +  T+  L+KA
Sbjct: 3   LRPSFR-------RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKA 55

Query: 91  CG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           C    S+Q   ++HG  LKLGF +  ++ +  ++ Y+K   + SA   F +      V++
Sbjct: 56  CANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSW 115

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG--ASFDVKE----GEQIHGF 201
            AMV  Y      D++  +  EM  LG E    +  ++L   ++ D  E    G+ IH  
Sbjct: 116 NAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCC 175

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GV 258
            +K+G +    + L N++M +YV+     +A K+FD + E  ++SW+  I         V
Sbjct: 176 LIKLGIVYLEVS-LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAV 234

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           EA+GLF  ++     I+    +NL+S     R L     + +   K G  E   + N LI
Sbjct: 235 EAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLI 294

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
           +MY KCG +  AR IFD +I K  +SW SMIAGY   G   +ALD+F  M+   + PNG 
Sbjct: 295 TMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGA 354

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T+A+++ A ++  SL    ++  +I  +G   D  + + LI  Y KC ++ +++ V   +
Sbjct: 355 TLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERV 414

Query: 439 DKKNAVHINALASVLVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
             K+     ++ +         EA+ L+ +         +   ++ V  AC+    +E+G
Sbjct: 415 TDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEG 474

Query: 498 KAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGY 554
              +  +++  +     VE  + +ID+  + G ++ A  A + +  D  A  W  ++   
Sbjct: 475 LK-YFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSAC 533

Query: 555 AQHG 558
             HG
Sbjct: 534 RIHG 537



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 5/175 (2%)

Query: 2   IYSLLIKNG-HHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++SL++K G +  DP+    LI+ + K  +   A R       + ++++ ++I+G     
Sbjct: 274 VHSLVLKCGCNEKDPV-ENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLG 332

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
             G AL LF R+    +RP+  T +++V AC   GSL   + +       G  S   + +
Sbjct: 333 HPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQT 392

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
             I  Y+K G IV A   F    D D   +T+M+  Y  +G  +++  +F +M +
Sbjct: 393 SLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTT 447


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 191/635 (30%), Positives = 303/635 (47%), Gaps = 46/635 (7%)

Query: 159 EFDKSKEVFVEMRSLGLELNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
           E D S+E+ +     G  L  F S+T    +S   K   Q+    V     + + +HL  
Sbjct: 18  EIDHSRELII----FGFVLPPFFSITHSTQSSSIWK---QLTSTKVAPSVPTNIPSHLGL 70

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQI 274
            ++   +  G    A ++FD I +PD  + S  I+A    G+  EA  L+  LR    + 
Sbjct: 71  RLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKP 130

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           +    + +  + G        K++     + G M    +GNALI  YGKC  V  AR +F
Sbjct: 131 HNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVF 190

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           D L+ KD VSW SM + Y   G     L +FC M    + PN  T++SIL A S  K LK
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK 250

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS--- 451
               +H   ++ G + +  + S L++ Y +C ++ +++ V   +  ++ V  N + +   
Sbjct: 251 SGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310

Query: 452 --------VLVYASCHAEALELYRTIW----GSCRE--------------------VNGS 479
                   + +++   ++ +E     W    G C E                     N  
Sbjct: 311 TNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           T S  L AC+ +  L  GK +HC   +     D+   +A++ MY KCG +  ++  F  I
Sbjct: 371 TISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMI 430

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
           CR  +  WN M++  A HG   EV  LF  M + G+KP+ +T+  VL+ C H+ LV E  
Sbjct: 431 CRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGL 490

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
              + M   H + P   HYAC+VD+  R G L  A   I +MP+ P A  W +LL AC +
Sbjct: 491 QIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRV 550

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
           Y N++L  ++ +KL E++P+N   YV L N+  +A +W++  + R  MKE+ + K PG S
Sbjct: 551 YKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCS 610

Query: 720 WIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           W+ VG   H F  GD ++ +S +IY  L +L E M
Sbjct: 611 WLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKM 645



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 216/470 (45%), Gaps = 55/470 (11%)

Query: 15  PILSTTLISHF--------TKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
           P + T + SH             DFRRA +   +    D  T + LIS          A+
Sbjct: 58  PSVPTNIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAI 117

Query: 67  KLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +L+  LR +G++P    F ++ KACG+       + VH   ++ G  S  +L +  I  Y
Sbjct: 118 RLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAY 177

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
            K   +  A   F D +  D V++T+M   YV  G       VF EM   G++ N  +L+
Sbjct: 178 GKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLS 237

Query: 184 AVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           ++L A     D+K G  IHGF V+ G +  V   + +A+++LY RC     A  +FD + 
Sbjct: 238 SILPACSELKDLKSGRAIHGFAVRHGMIENV--FVCSALVSLYARCLSVKQARLVFDLMP 295

Query: 241 EPDVVSWSERIAA-----------------ACDGVE---------------------AFG 262
             DVVSW+  + A                 +  GVE                     A  
Sbjct: 296 HRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVE 355

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
           + + ++   F+ N+ T+ + L +      LR GK++  + ++   +  ++   AL+ MY 
Sbjct: 356 MLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYA 415

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
           KCG +N +R++FD +  KD V+WN+MI   + +G   + L +F  ML+  + PN  T   
Sbjct: 416 KCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTG 475

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS-MISCLITTYGKCNALNES 431
           +L   S+S+ +++ +Q+ + + +   +  D+   +C++  + +   L+E+
Sbjct: 476 VLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEA 525



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/400 (21%), Positives = 171/400 (42%), Gaps = 54/400 (13%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALIS-----G 55
           +++   I+ G   D  L   LI  + K      A R   D   +D++++ ++ S     G
Sbjct: 153 EVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCG 212

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSR 112
           L R       L +F  + + G++P++ T SS++ AC  L++      +HG  ++ G    
Sbjct: 213 LPRL-----GLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIEN 267

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V++ S  +  YA+   +  A + F      D V++  ++  Y  N E+DK   +F +M S
Sbjct: 268 VFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSS 327

Query: 173 LGLELNEFSLTAVLGASFDVKEGE-------QIHGFGVKVGFLS-----GVCNHLNN--- 217
            G+E +E +  AV+G   +  + E       ++   G K   ++       C+ L +   
Sbjct: 328 KGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRM 387

Query: 218 ---------------------AIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC- 255
                                A++ +Y +CG    +  +FD I   DVV+W+  I A   
Sbjct: 388 GKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAM 447

Query: 256 --DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             +G E   LF+ +  +  + N  T   +LS     R++  G QI     +   +E  + 
Sbjct: 448 HGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDAN 507

Query: 314 GNA-LISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAG 351
             A ++ ++ + G++++A      +  + + S W +++  
Sbjct: 508 HYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGA 547


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 201/732 (27%), Positives = 366/732 (50%), Gaps = 42/732 (5%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARFC 60
            I+  ++K+G   D  L+  LIS +    +   A R LFD+   ++++ +N++IS  A+  
Sbjct: 468  IHGFVVKSGFSSDEFLTPALISMYAGGGNLFIA-RDLFDSAAEKNVVIWNSMISAYAQNQ 526

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +S  A K+F ++    ++P+  TF S++  C    +    + +H   +K    S++ + +
Sbjct: 527  KSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVAT 586

Query: 118  GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
              +  YAK G+  SA   F   +        +M+ GY               + S+G   
Sbjct: 587  ALLSMYAKLGDXNSAXFIFYQ-MPRKTSYRDSMISGY--------------GIMSMGRPF 631

Query: 178  NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
                L   L     +K G++         F S +  +++NA++  Y  CG+   + K+F 
Sbjct: 632  FWVRLLMHLA----IKTGKE---------FDSXL--NISNALLAFYSDCGKLSSSFKLFQ 676

Query: 238  EITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            ++   + +SW+  I+      D  +A  L   ++    +++  T+I+++        L  
Sbjct: 677  KMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQ 736

Query: 295  GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
            G  +  +  K GF   VS+ NALISMY  CG +N  + +F+ + ++  VSWN++I GY  
Sbjct: 737  GMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRF 796

Query: 355  NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
            +   N+ +  FC M+     PN  T+ ++L +     +L Q   +H+  +++G +++  +
Sbjct: 797  HYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCX---TLLQGKSIHAFAVRTGVIVETPI 853

Query: 415  ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            I+ LI+ Y +   +N    +     K++    NA+ SV V      E++  +  +  +  
Sbjct: 854  ITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARV 913

Query: 475  EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
            E +  TF  ++ AC  ++ L    ++    ++  +D+ I + +A+ID++ +CG I  AK+
Sbjct: 914  EPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKK 973

Query: 535  AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
             F  +       W+ M+ GY  HG       L ++M   G+KPD ITY +VL++C H G 
Sbjct: 974  IFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGF 1033

Query: 595  VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            + +     + M +  G+  ++EHYAC+VDLLGR G L  A   ++++P  P   + +SLL
Sbjct: 1034 IDQGWMIFNSMVE-EGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLL 1092

Query: 655  SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
             AC I+GN+ LG    S L EL P N  +YV+L N+YA+AG W D  ++R +M+E+ L K
Sbjct: 1093 XACIIHGNVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRK 1152

Query: 715  EPGYSWIHVGGY 726
             PG+S +    Y
Sbjct: 1153 IPGFSLVEGNRY 1164



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 157/698 (22%), Positives = 328/698 (46%), Gaps = 49/698 (7%)

Query: 2    IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
            ++ ++++     + ++ T L+  + K     +A   L      D++T+NALISG   +  
Sbjct: 367  VHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISG---YSL 423

Query: 62   SGPALKLFDRLRY---QGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYL 115
            +G   ++F+ LR     GL+P+  TF+S++  C  ++  +I   +HG  +K GFSS  +L
Sbjct: 424  NGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFL 483

Query: 116  VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
                I  YA  G +  A   F    + + V + +M+  Y  N +  ++ ++F +M    +
Sbjct: 484  TPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANM 543

Query: 176  ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
            + N  +  +++     S +   G+ +H   +K    S +   +  A++++Y + G    A
Sbjct: 544  QPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLS--VATALLSMYAKLGDXNSA 601

Query: 233  VKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
              +F ++  P   S+ + +      +  +G+    R        +  + LL  +     +
Sbjct: 602  XFIFYQM--PRKTSYRDSM------ISGYGIMSMGR-------PFFWVRLLMHLA----I 642

Query: 293  RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
            + GK+         F   ++I NAL++ Y  CG+++ +  +F  +  ++++SWN++I+G 
Sbjct: 643  KTGKE---------FDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGC 693

Query: 353  SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
              NG   +A+ +   M +  +  +  T+ SI+      ++L Q M +H + IK+GF  D 
Sbjct: 694  VHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDV 753

Query: 413  SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            S+++ LI+ Y  C  +N  K +   +  ++ V  NAL +   +     E +  +  +   
Sbjct: 754  SLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXE 813

Query: 473  CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             ++ N  T   +L +C     L QGK+IH  A++     +  + +++I MY +   I   
Sbjct: 814  GQKPNYVTLLNLLPSCXT---LLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSF 870

Query: 533  KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
               F    ++ +A WNA+M  Y Q     E    F ++    V+PD IT+L+++++C   
Sbjct: 871  IFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQL 930

Query: 593  GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
              +  + + ++ +    G    +     ++DL  R G +  AK   + +    DA  W +
Sbjct: 931  SSLNLSNSVMAYVIQ-KGFDKHIVISNALIDLFARCGNISIAKKIFEGLS-SKDAVSWST 988

Query: 653  LLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLS 688
            +++   ++G+ +  L LL+  +L  ++PD  +   +LS
Sbjct: 989  MINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLS 1026



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 244/547 (44%), Gaps = 47/547 (8%)

Query: 56  LARFCQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGF 109
           + R C  G     L ++ + R  G   D FTF  ++KAC   G++   E VH + L+  F
Sbjct: 317 IRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAF 376

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-EVFV 168
              + + +  ++ YAK+G +V A +        D V + A++ GY  NG FDK   EV  
Sbjct: 377 EENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNG-FDKEVFEVLR 435

Query: 169 EMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           ++  +GL+ N  +  +++     +K    G+ IHGF VK GF S     L  A++++Y  
Sbjct: 436 QILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSD--EFLTPALISMYAG 493

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
            G    A  +FD   E +VV W+  I+A        EAF +F+ +   + Q N  T +++
Sbjct: 494 GGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 553

Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
           +           GK + A   K      +S+  AL+SMY K G  N A  IF Y + + +
Sbjct: 554 IPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIF-YQMPRKT 612

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
              +SMI+GY   G  +     F   L   L            A+   K     + +   
Sbjct: 613 SYRDSMISGY---GIMSMGRPFFWVRLLMHL------------AIKTGKEFDSXLNIS-- 655

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
                        + L+  Y  C  L+ S ++  ++  +NA+  N L S  V+     +A
Sbjct: 656 -------------NALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKA 702

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
           + L   +     E++  T   ++  C    +L QG  +H  A+K  +  D+ + +A+I M
Sbjct: 703 VALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISM 762

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
           Y  CG I   K  F  +   S+  WNA++ GY  H   +EV   F +M   G KP+ +T 
Sbjct: 763 YFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTL 822

Query: 583 LAVLTSC 589
           L +L SC
Sbjct: 823 LNLLPSC 829



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 17/335 (5%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDL-------RFNDFQINEYTMINLLS 284
           A+  F+ I +P V   +  I   CD     GLF+D+       R      +++T   ++ 
Sbjct: 298 ALSAFEAIEKPSVFLQNLMIRRLCD----HGLFEDVLCVYLKCRVLGCPSDDFTFPFVIK 353

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +      +   + +     +  F E + I  AL+  Y K G++  AR + D +   D V+
Sbjct: 354 ACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVT 413

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           WN++I+GYS NGF  +  ++   +LE  L PN  T ASI+   +  K L     +H  ++
Sbjct: 414 WNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVV 473

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
           KSGF  D+ +   LI+ Y     L  ++ +     +KN V  N++ S        +EA +
Sbjct: 474 KSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFK 533

Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
           +++ +  +  + N  TF  ++  C    +   GK++H   +K R D  + V +A++ MY 
Sbjct: 534 MFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYA 593

Query: 525 KCGTIEDAKRAFRKICRDS------LAGWNAMMMG 553
           K G    A   F ++ R +      ++G+  M MG
Sbjct: 594 KLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMG 628



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 1/297 (0%)

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           N MI    ++G F   L ++          + +T   +++A S   ++  A  VH  +++
Sbjct: 314 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLR 373

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           + F  +  + + L+  Y K   + +++ VL +I + + V  NAL S         E  E+
Sbjct: 374 TAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 433

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
            R I     + N STF+ ++  C  M  L+ GK+IH   +K+ +  D F+  A+I MY  
Sbjct: 434 LRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 493

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
            G +  A+  F      ++  WN+M+  YAQ+    E   +F +M K  ++P+ +T++++
Sbjct: 494 GGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 553

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
           +  C ++      ++ L      + L  QL     ++ +  ++G    A     QMP
Sbjct: 554 IPCCENSANFWXGKS-LHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMP 609


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 161/486 (33%), Positives = 278/486 (57%), Gaps = 1/486 (0%)

Query: 270 NDFQINEYTMIN-LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
            DF     + ++ +L      ++L  GK   A    +G    +   N LI+MY KCG V+
Sbjct: 57  KDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVD 116

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
            AR +FD +  +  VSWN+MI   ++NG  N+ALD+   M       + +T++S+L A +
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
              +L +   +H+  IK+   L+  + + L+  Y KC  + ++  V   +  ++ V  ++
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSS 236

Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
           +A+  V    + +AL L+R  W +  + +    S V+ ACA +  + +GK ++ L  K+ 
Sbjct: 237 MAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG 296

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
           +  +IFV S++IDMY KCG IE++ + FR + + ++  WNAM+ G ++H    EV  LF 
Sbjct: 297 FCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFE 356

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
           KM + G+ P+++T+++VL++C H GLV++ + Y   M+  H L P + HY+C+VD L R 
Sbjct: 357 KMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRA 416

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G +  A   I ++P    A +W SLL++C  +GN++L  +A  KL +++P N   Y+LLS
Sbjct: 417 GQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLS 476

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
           N+YA+ G W++V K+RK +KE  + KE G SWI +    H F  G+ +H +  EIY +L 
Sbjct: 477 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 536

Query: 749 KLYEHM 754
           ++ + +
Sbjct: 537 EVMDEL 542



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 184/370 (49%), Gaps = 17/370 (4%)

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC- 255
           QI   G+K   L+      +N ++N+Y +CG    A ++FDE+    +VSW+  I +   
Sbjct: 89  QILLMGLKTDLLT------SNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142

Query: 256 --DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
             +  EA  L   ++      +E+T+ ++L +   +  L   + + AF  K      V +
Sbjct: 143 NGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFV 202

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
             AL+ +Y KCG + DA  +F+ +  +  V+W+SM AGY +N  + QAL +F    E  L
Sbjct: 203 ATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGL 262

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
             + + M+S++ A +   ++ +  QV++ + KSGF  +  + S LI  Y KC  + ES +
Sbjct: 263 KHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYK 322

Query: 434 VLSEIDKKNAVHINALASVLVYASCHAEALE---LYRTIWGSCREVNGSTFSIVLKACAA 490
           V  +++K+N V  NA+ S L   S HA +LE   L+  +       N  TF  VL AC  
Sbjct: 323 VFRDVEKRNVVLWNAMISGL---SRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 491 MTDLEQGKAIHCLALKARY-DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WN 548
           M  +++G+    L  K  +   ++F  S ++D   + G I +A     K+  ++ A  W 
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 549 AMMMGYAQHG 558
           +++     HG
Sbjct: 440 SLLASCRTHG 449



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 186/392 (47%), Gaps = 21/392 (5%)

Query: 87  LVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
           ++K C     L + +  H   L +G  + +   +  I  Y+K G +  A   F +     
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHG 200
            V++  M+     NGE +++ ++ ++M+  G   +EF++++VL    A   + E + +H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG--- 257
           F +K      V   +  A++++Y +CG   DAV +F+ + +  VV+WS   A        
Sbjct: 190 FAIKAAMDLNV--FVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            +A  LF+       + +++ M +++ +  G   +  GKQ+ A   K GF   + + ++L
Sbjct: 248 EQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSL 307

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I MY KCG + ++  +F  +  ++ V WN+MI+G S +    + + +F  M +  L PN 
Sbjct: 308 IDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLS 436
            T  S+L A  +   +K+  +    + K   L  +    SC++ T  +   + E+  ++S
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 437 EIDKKNAVHINALASVL--VYASCHAEA-LEL 465
           ++        NA AS+   + ASC     LEL
Sbjct: 428 KLP------FNASASMWGSLLASCRTHGNLEL 453



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 177/358 (49%), Gaps = 13/358 (3%)

Query: 10  GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF 69
           G   D + S  LI+ ++K      A +   +  +R ++++N +I  L +  +   AL L 
Sbjct: 94  GLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLL 153

Query: 70  DRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
            +++ +G     FT SS++ AC +   L E +++H   +K      V++ +  ++ YAK 
Sbjct: 154 LQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKC 213

Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
           G +  A   F    D   V +++M  GYV N  ++++  +F +    GL+ ++F +++V+
Sbjct: 214 GLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273

Query: 187 GASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
            A   +    EG+Q++    K GF S +   + ++++++Y +CG   ++ K+F ++ + +
Sbjct: 274 CACAGLAAMIEGKQVNALLSKSGFCSNI--FVASSLIDMYAKCGGIEESYKVFRDVEKRN 331

Query: 244 VVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VV W+  I+        +E   LF+ ++      N+ T +++LS+ G   +++ G++   
Sbjct: 332 VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFD 391

Query: 301 FCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENG 356
              K   +   V   + ++    + GQ+ +A  +   L F  S S W S++A    +G
Sbjct: 392 LMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHG 449



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 7/260 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++  IK    L+  ++T L+  + K    + A        +R ++T++++ +G  +   
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              AL LF +    GL+ D F  SS++ AC  L    E + V+ +  K GF S +++ S 
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASS 306

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I+ YAK G I  +   FRD    + V + AM+ G   +    +   +F +M+ +GL  N
Sbjct: 307 LIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPN 366

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           + +  +VL A      VK+G++      K   L+    H  + +++   R GQ  +A  +
Sbjct: 367 DVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHY-SCMVDTLSRAGQIFEAYDL 425

Query: 236 FDEITEPDVVSWSERIAAAC 255
             ++      S    + A+C
Sbjct: 426 ISKLPFNASASMWGSLLASC 445



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 58/94 (61%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+ +LL K+G   +  ++++LI  + K      +++   D + R+++ +NA+ISGL+R  
Sbjct: 287 QVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHA 346

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           +S   + LF++++  GL P+  TF S++ ACG +
Sbjct: 347 RSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHM 380


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 181/564 (32%), Positives = 289/564 (51%), Gaps = 9/564 (1%)

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
             +H   V  GF +   N + +A+  LY    +  DA K+FD +  PD V W+  + A  
Sbjct: 143 RPLHALAVASGFAAD--NFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNT-LLAGL 199

Query: 256 DGVEAFGLFKDLR-FNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
            G EA   F  +      + +  T+ ++L +         G+ + AF  K G  +   + 
Sbjct: 200 SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
             LIS+Y KCG +  AR +FD +   D V++N++I+GYS NG    ++++F  ++   L 
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P+  T+ +++   S       A  +H+H++K+G   +  + + L T Y + N ++ ++R 
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              + +K     NA+ S          A+ L++ +       N  T S  L ACA +  L
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             GK +H +    + + +++V +A+IDMY KCG+I +A+  F  +   ++  WN M+ GY
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HG   E   L+  M    + P   T+L+VL +C H GLV+E  T    M+  +G+ P 
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
           +EH  C+VDLLGR G L+ A   I + P   + P   IW +LL AC ++ + DL  LA  
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--IWGALLGACMVHKDGDLAKLASQ 617

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           KL EL+P+N   YVLLSNLY S   +++   +R+E K + L K PG + I +G   H F 
Sbjct: 618 KLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFM 677

Query: 732 AGDSSHSQSKEIYKELIKLYEHMV 755
           AGD +H QS  IY  L KL   M+
Sbjct: 678 AGDRAHPQSDAIYLYLEKLTAKMI 701



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 207/451 (45%), Gaps = 17/451 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            +++L + +G   D  +++ L   +   +    A +      + D + +N L++GL+   
Sbjct: 144 PLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS--- 200

Query: 61  QSGPALKLFDRLRYQG-LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
               AL+ F R+   G +RPD+ T +S++ A   +    +   VH    K G +   ++V
Sbjct: 201 -GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +G I  YAK G++  A   F      D V Y A++ GY  NG    S E+F E+  +GL 
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319

Query: 177 LNEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  +L A++              +H   VK G  +     ++ A+  LY R      A 
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANA--PVSTALTTLYCRFNDMDSAR 377

Query: 234 KMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           + FD + E  + SW+  I+  A +G+   A  LF+ ++  + + N  T+ + LS+     
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK +            V +  ALI MY KCG + +AR IFD +  K+ VSWN MI+
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFL 409
           GY  +G   +AL ++  M++  L P   T  S+L A S+   +K+   V   +    G  
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDK 440
                 +C++   G+   L E+  ++SE  K
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPK 588


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 187/651 (28%), Positives = 323/651 (49%), Gaps = 31/651 (4%)

Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL--NE 179
           ++  SG +  A   F      D   Y  ++  Y  +     +  + +  R L   +  N 
Sbjct: 66  DHIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNN 125

Query: 180 FSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
           ++    L A   + +   G  IH   +  G  + +   ++ A++++YV+C    DA  +F
Sbjct: 126 YTFPFALKACSALADHHCGRAIHRHAIHAGLQADL--FVSTALLDMYVKCACLPDAAHIF 183

Query: 237 DEITEPDVVSWSERIAAACDGVEAFGLFK---------DLRFNDFQINEYTMINLLSSVG 287
             +   D+V+W+  +A    G    G++           ++ +  + N  T++ LL  + 
Sbjct: 184 ATMPARDLVAWNAMLA----GYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLA 239

Query: 288 GERILRAGKQIQAFCY----------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            +  L  G  + A+C           K    + V +G AL+ MY KCG +  AR +FD +
Sbjct: 240 QQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM 299

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQA 396
             ++ V+W+++I G+       QA  +F  ML   L   +  ++AS L A ++   L+  
Sbjct: 300 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 359

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q+H+ + KSG   D +  + L++ Y K   ++++  +  E+  K+ V  +AL S  V  
Sbjct: 360 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 419

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EA  +++ +     E + +T   ++ AC+ +  L+ G+  H   +      +  + 
Sbjct: 420 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A+IDMY KCG I+ +++ F  +    +  WN M+ GY  HG   E + LF +M+  G  
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 539

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           PD +T++ +L++C H+GLV E + +   M   +GL P++EHY C+VDLL R G L+ A  
Sbjct: 540 PDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYE 599

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  MP+  D  +W +LL AC +Y NIDLG      + EL P+    +VLLSN+Y++AG 
Sbjct: 600 FIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGR 659

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +++  ++R   K +   K PG SWI + G  H F  GD SH QS EIY+EL
Sbjct: 660 FDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 710



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 247/529 (46%), Gaps = 35/529 (6%)

Query: 33  RAFRFLFDTQNRDIITYNALISGLARFCQSGPA--LKLFDRLRYQGLRPDAFTFSSLVKA 90
           RA        + D+ TYN LI   +    +  A  L L+ R+    + P+ +TF   +KA
Sbjct: 75  RAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKA 134

Query: 91  CGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
           C +L ++     +H   +  G  + +++ +  ++ Y K   +  A   F      D VA+
Sbjct: 135 CSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAW 194

Query: 148 TAMVCGYVWNGEFDKSKE--VFVEMRSLGLELNEFSLTA---VLGASFDVKEGEQIHGFG 202
            AM+ GY  +G +  +    + ++M+   L  N  +L A   +L     + +G  +H + 
Sbjct: 195 NAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYC 254

Query: 203 V----------KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           +          K     GV   L  A++++Y +CG  L A ++FD +   + V+WS  I 
Sbjct: 255 IRACLHPNRNSKSKLTDGVL--LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312

Query: 253 A--ACDGV-EAFGLFKDLRFNDFQ-INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
               C  + +AF LFK +       ++  ++ + L +      LR G+Q+ A   K G  
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVH 372

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
             ++ GN+L+SMY K G ++ A ++FD +  KD+VS++++++GY +NG   +A  +F  M
Sbjct: 373 ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKM 432

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
              ++ P+  TM S++ A S+  +L+     H  +I  G   + S+ + LI  Y KC  +
Sbjct: 433 QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRI 492

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           + S++V + +  ++ V  N + +         EA  L+  +       +G TF  +L AC
Sbjct: 493 DLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSAC 552

Query: 489 AAMTDLEQGKAI-----HCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
           +    + +GK       H   L  R +  I     ++D+  + G +++A
Sbjct: 553 SHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLLSRGGFLDEA 597



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 219/469 (46%), Gaps = 27/469 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   I  G   D  +ST L+  + K A    A         RD++ +NA+++G A    
Sbjct: 147 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 206

Query: 62  SGPALK--LFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCL----------K 106
              A+   L  +++   LRP+A T  +L+      G+L +   VH  C+          K
Sbjct: 207 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 266

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
              +  V L +  ++ YAK G ++ A   F      + V ++A++ G+V      ++  +
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326

Query: 167 FVEMRSLGL-ELNEFSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           F  M + GL  L+  S+ + L   AS D ++ GEQ+H    K G  + +     N+++++
Sbjct: 327 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTA--GNSLLSM 384

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y + G    A+ +FDE+   D VS+S  ++         EAF +FK ++  + + +  TM
Sbjct: 385 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 444

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++L+ +      L+ G+         G     SI NALI MY KCG+++ +R +F+ +  
Sbjct: 445 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPS 504

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +D VSWN+MIAGY  +G   +A  +F  M      P+G T   +L A S+S  + +    
Sbjct: 505 RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHW 564

Query: 400 HSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
             H++  G+ L   M    C++    +   L+E+   +  +  +  V +
Sbjct: 565 F-HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRV 612



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 11/223 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++LL K+G H D     +L+S + K     +A     +   +D ++Y+AL+SG  +  
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A  +F +++   + PDA T  SL+ AC    +LQ     HG  +  G +S   + +
Sbjct: 421 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 480

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  +   F      D V++  M+ GY  +G   ++  +F+EM +LG   
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 540

Query: 178 NEFSLTAVLGA---SFDVKEGEQI-----HGFGVKVGFLSGVC 212
           +  +   +L A   S  V EG+       HG+G+       +C
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC 583


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 171/563 (30%), Positives = 293/563 (52%), Gaps = 38/563 (6%)

Query: 232 AVKMFDEITEPDV---VSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I +P+      +   ++ + +  +   +++ +R     ++ ++   LL ++  
Sbjct: 75  ALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSR 134

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + L  G +I     K+GF     +   L+ MY  CG++ +AR +FD +  +D V+W+ M
Sbjct: 135 VKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIM 194

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I GY ++G FN AL +F  M  +++ P+   ++++L A   + +L     +H  I+++  
Sbjct: 195 IDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNI 254

Query: 409 LLDDSMISCLITTYGKCNALN-------------------------------ESKRVLSE 437
           ++D  + S L+T Y  C +++                                ++ V ++
Sbjct: 255 VVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQ 314

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + KK+ V  +A+ S    +    EAL L+  +     + +  T   V+ ACA +  L+Q 
Sbjct: 315 MVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA 374

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           K IH    K  +   + + +A+I+MY KCG++E A+R F K+ R ++  W  M+  +A H
Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMH 434

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G        F++M    ++P+ IT++ VL +C HAGLV E R     M + H + P+  H
Sbjct: 435 GDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVH 494

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDL GR  LL  A   ++ MP+ P+  IW SL++AC ++G I+LG  A  +LLEL 
Sbjct: 495 YGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELD 554

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           PD++  +V LSN+YA A  W DVG++RK MK K + KE G S   +    H F   D SH
Sbjct: 555 PDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSH 614

Query: 738 SQSKEIYKELIKLYEHMVATAKL 760
             + EIY+   KLYE +V+  KL
Sbjct: 615 KHADEIYE---KLYE-VVSKLKL 633



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 206/423 (48%), Gaps = 43/423 (10%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLK 106
           N  +  L+R  +    L +++R+R QGL  D F+F  L+KA     SL E   +HG+  K
Sbjct: 91  NRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAK 150

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
           LGF S  ++ +G +  YA  G I  A + F      D V ++ M+ GY  +G F+ +  +
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210

Query: 167 FVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F EM++  +E +E  L+ VL   G + ++  G+ IH F ++   +  V  HL +A++ +Y
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIV--VDPHLQSALVTMY 268

Query: 224 VRC-------------------------------GQKLDAVKMFDEITEPDVVSWSERIA 252
             C                               GQ  +A  +F+++ + D+V WS  I+
Sbjct: 269 ASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMIS 328

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
              +     EA  LF +++    + ++ TM++++++      L   K I  F  K GF  
Sbjct: 329 GYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGG 388

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            + I NALI MY KCG +  AR IFD +  K+ +SW  MI+ ++ +G    AL  F  M 
Sbjct: 389 ALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQME 448

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           + ++ PNG T   +L A S++  +++  ++ +S I +           C++  +G+ N L
Sbjct: 449 DENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLL 508

Query: 429 NES 431
            E+
Sbjct: 509 REA 511



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 187/410 (45%), Gaps = 68/410 (16%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           +I+ L  K G   DP + T L+  +        A R +FD   +RD++T++ +I G   +
Sbjct: 143 EIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEA-RLMFDKMFHRDVVTWSIMIDG---Y 198

Query: 60  CQSG---PALKLFDRLRYQGLRPDAFTFSSLVKACGS-------------LQENEIV--- 100
           CQSG    AL LF+ ++   + PD    S+++ ACG              + EN IV   
Sbjct: 199 CQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDP 258

Query: 101 ---------HGVCLKLGFSSRVY-------LV--SGFIENYAKSGEIVSAEMCFRDCLDL 142
                    +  C  +  +  ++       LV  +  +  Y+K G+I +A   F   +  
Sbjct: 259 HLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKK 318

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQ---IH 199
           D V ++AM+ GY  +    ++  +F EM+SLG++ ++ ++ +V+ A   +   +Q   IH
Sbjct: 319 DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIH 378

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---D 256
            F  K GF  G    +NNA++ +Y +CG    A ++FD++   +V+SW+  I+A     D
Sbjct: 379 LFVDKNGF--GGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGD 436

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN- 315
              A   F  +   + + N  T + +L +     ++  G++I        F  +++  N 
Sbjct: 437 AGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKI--------FYSMINEHNI 488

Query: 316 --------ALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMIAGYSENG 356
                    ++ ++G+   + +A  + + +    +V  W S++A    +G
Sbjct: 489 TPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 5/215 (2%)

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS---MISCLITTYGKCNALNESKRVLSEI 438
           ++  A+S++ SL    QVH+ I++S   LD S   ++  +I++    ++L+ +  V + I
Sbjct: 25  TLFSALSSATSLTHLKQVHAQILRSK--LDRSTSLLVKLVISSCALSSSLDYALSVFNLI 82

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            K      N     L  +    + L +Y  +      V+  +F  +LKA + +  L +G 
Sbjct: 83  PKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGL 142

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            IH LA K  +D D FV++ ++ MY  CG I +A+  F K+    +  W+ M+ GY Q G
Sbjct: 143 EIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSG 202

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            +++   LF +M  + V+PDE+    VL++C  AG
Sbjct: 203 LFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAG 237


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/605 (31%), Positives = 311/605 (51%), Gaps = 19/605 (3%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNE------FSLTAVLGASFDVKEGEQIHGFGVKVGFLSG 210
            G+  +  E    M   G+ +N       F +   LGA   + +G+  H    ++  ++ 
Sbjct: 58  QGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGA---LSDGKLFHN---RLQRMAN 111

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDL 267
               ++N I+ +Y  C     A + FD+I + D+ SW+  I+A  +     EA GLF  L
Sbjct: 112 SNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLF--L 169

Query: 268 RFNDFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
           R  D  I  N      L+ S     +L  GKQI +   ++ F   +SI   + +MY KCG
Sbjct: 170 RMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCG 229

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
            ++ A    + +  K +V+   ++ GY++      AL +F  M+   +  +G+  + IL+
Sbjct: 230 WLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILK 289

Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
           A +    L    Q+HS+ IK G   + S+ + L+  Y KC     +++    I + N   
Sbjct: 290 ACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFS 349

Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLAL 505
            +AL +    +     ALE+++TI      +N   ++ + +AC+A++DL  G  IH  A+
Sbjct: 350 WSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAI 409

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           K      +  ESA+I MY KCG ++ A +AF  I +     W A++  +A HG   E   
Sbjct: 410 KKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALR 469

Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
           LF +M   GV+P+ +T++ +L +C H+GLV+E + +L  M+D +G+ P ++HY C++D+ 
Sbjct: 470 LFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIY 529

Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
            R GLL  A   I  MP  PD   W+SLL  C    N+++G++A   +  L P + +TYV
Sbjct: 530 SRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYV 589

Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           ++ NLYA AG W++  + RK M E+ L KE   SWI V G  H F  GD  H Q+++IY 
Sbjct: 590 IMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYS 649

Query: 746 ELIKL 750
           +L +L
Sbjct: 650 KLKEL 654



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 198/418 (47%), Gaps = 12/418 (2%)

Query: 31  FRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA 90
           F  A RF     +RD+ ++  +IS      +   A+ LF R+   G+ P+   FS+L+ +
Sbjct: 130 FTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMS 189

Query: 91  CGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAY 147
                 L   + +H   +++ F++ + + +     Y K G +  AE+          VA 
Sbjct: 190 FADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVAC 249

Query: 148 TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVK 204
           T ++ GY        +  +F +M S G+EL+ F  + +L A     D+  G+QIH + +K
Sbjct: 250 TGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIK 309

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AF 261
           +G  S V   +   +++ YV+C +   A + F+ I EP+  SWS  IA  C   +   A 
Sbjct: 310 LGLESEV--SVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRAL 367

Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
            +FK +R     +N +   N+  +      L  G QI A   K G +  +S  +A+I+MY
Sbjct: 368 EVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMY 427

Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            KCG+V+ A   F  +   D+V+W ++I  ++ +G  ++AL +F  M    + PN  T  
Sbjct: 428 SKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFI 487

Query: 382 SILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            +L A S+S  +K+  Q + S   K G        +C+I  Y +   L E+  V+  +
Sbjct: 488 GLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSM 545



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 220/473 (46%), Gaps = 41/473 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+S LI+     D  + T + + + K      A         +  +    L+ G  +  
Sbjct: 201 QIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAA 260

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  AL LF ++  +G+  D F FS ++KAC   G L   + +H  C+KLG  S V + +
Sbjct: 261 RNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGT 320

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y K     +A   F    + ++ +++A++ GY  +G+FD++ EVF  +RS G+ L
Sbjct: 321 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLL 380

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVK---VGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           N F    +  A   V +   G QIH   +K   V +LSG      +A++ +Y +CG+   
Sbjct: 381 NSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG-----ESAMITMYSKCGKVDY 435

Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A + F  I +PD V+W+  I A        EA  LFK+++ +  + N  T I LL++   
Sbjct: 436 AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSH 495

Query: 289 ERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             +++ GKQ + +   K G    +   N +I +Y + G + +A  +   + F+ D +SW 
Sbjct: 496 SGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWK 555

Query: 347 SMIAG------------YSENGFFNQALDMFCHMLEFSL--IPNGYTMASILEAVSNSKS 392
           S++ G             ++N F    LD   +++ F+L  +   +  A+    +   ++
Sbjct: 556 SLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERN 615

Query: 393 LKQAMQVHSHIIKSG---FLLDDSMISCLITTYGKCNALNES-----KRVLSE 437
           L++ +     I+K     F++ D         Y K   LN S     +R+L+E
Sbjct: 616 LRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNE 668


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 247/433 (57%), Gaps = 1/433 (0%)

Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
           + N+LI +Y KCG V +A  +FD +  KD VSW S+IAGY++N    +A+ +   ML+  
Sbjct: 88  LDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR 147

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
             PNG+T AS+L+A           Q+H+  +K  +  D  + S L+  Y +C  ++ + 
Sbjct: 148 FKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMAT 207

Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
            V  ++D KN V  NAL S          AL ++  +  +  E    T+S +    A + 
Sbjct: 208 AVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIG 267

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
            LEQGK +H   +K+R     FV + ++DMY K G++ DA++ F ++    L  WN+M+ 
Sbjct: 268 ALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT 327

Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            +AQ+G   E  + F +M K G+  ++IT+L +LT+C H GLV+E + Y   + + + L 
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLE 386

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P++EHY  +VDLLGR GLL  A + I +MP+ P A +W +LL+AC ++ N  +G  A   
Sbjct: 387 PEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADH 446

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
           + +L PD+    VLL N+YAS G W+   ++RK MK   + KEP  SW+ +G   H F A
Sbjct: 447 VFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVA 506

Query: 733 GDSSHSQSKEIYK 745
            D +H +++EIYK
Sbjct: 507 NDDTHPRAEEIYK 519



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 186/375 (49%), Gaps = 10/375 (2%)

Query: 189 SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           S ++ +  +IHG      F       L+N++++LY +CG  ++A K+FD++ + D+VSW+
Sbjct: 64  SKNLDDARKIHGHLASSRFEGDAF--LDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWT 121

Query: 249 ERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             IA         EA GL   +    F+ N +T  +LL + G       G QI A   K 
Sbjct: 122 SLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKC 181

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
            + E V +G+AL+ MY +CG+++ A ++FD L  K+ VSWN++I+G++  G    AL +F
Sbjct: 182 DWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVF 241

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M         +T +SI   ++   +L+Q   VH+H++KS   L   + + ++  Y K 
Sbjct: 242 AEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKS 301

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
            ++ ++++V   +  K+ V  N++ +         EA+  +  +  S   +N  TF  +L
Sbjct: 302 GSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCIL 361

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVES--AVIDMYCKCGTIEDAKR-AFRKICRD 542
            AC+    +++GK  H   +   Y+ +  +E    V+D+  + G +  A    F+     
Sbjct: 362 TACSHGGLVKEGK--HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEP 419

Query: 543 SLAGWNAMMMGYAQH 557
           + A W A++     H
Sbjct: 420 TAAVWGALLAACRMH 434



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 158/337 (46%), Gaps = 11/337 (3%)

Query: 69  FDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
            D L    L P    + + + AC    +L +   +HG      F    +L +  I  Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G +V A   F      D V++T+++ GY  N    ++  +   M     + N F+  ++
Sbjct: 99  CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 186 L---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L   GA  D   G QIH   VK  +   V  ++ +A++++Y RCG+   A  +FD++   
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWHEDV--YVGSALLDMYARCGKMDMATAVFDKLDSK 216

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           + VSW+  I   A   DG  A  +F +++ N F+   +T  ++ S + G   L  GK + 
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVH 276

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A   K        +GN ++ MY K G + DAR +F+ ++ KD V+WNSM+  +++ G   
Sbjct: 277 AHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGK 336

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +A+  F  M +  +  N  T   IL A S+   +K+ 
Sbjct: 337 EAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEG 373



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 171/349 (48%), Gaps = 14/349 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L  +LI  + K      A +     + +D++++ +LI+G A+      A+ L   + 
Sbjct: 85  DAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGML 144

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
               +P+ FTF+SL+KA G+  ++ I   +H + +K  +   VY+ S  ++ YA+ G++ 
Sbjct: 145 KGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMD 204

Query: 131 SAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV---L 186
            A   F D LD  N V++ A++ G+   G+ + +  VF EM+  G E   F+ +++   L
Sbjct: 205 MATAVF-DKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGL 263

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
                +++G+ +H   VK      +   + N ++++Y + G  +DA K+F+ +   D+V+
Sbjct: 264 AGIGALEQGKWVHAHMVKS--RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVT 321

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  + A      G EA   F+++R +   +N+ T + +L++     +++ GK       
Sbjct: 322 WNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIK 381

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIAG 351
           +      +     ++ + G+ G +N A   IF   +   +  W +++A 
Sbjct: 382 EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 13/315 (4%)

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           H+    L P      + + A + SK+L  A ++H H+  S F  D  + + LI  Y KC 
Sbjct: 41  HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCG 100

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           ++ E+ +V  ++ KK+ V   +L +        AEA+ L   +     + NG TF+ +LK
Sbjct: 101 SVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           A  A  D   G  IH LA+K  + +D++V SA++DMY +CG ++ A   F K+   +   
Sbjct: 161 AAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM- 605
           WNA++ G+A+ G       +F +M + G +    TY ++ +     G + + +   + M 
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMV 280

Query: 606 ---SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
                L   +        ++D+  + G +  A+   +++ +  D   W S+L+A   YG 
Sbjct: 281 KSRQKLTAFVGN-----TMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG- 333

Query: 663 IDLGLLAGSKLLELQ 677
             LG  A S   E++
Sbjct: 334 --LGKEAVSHFEEMR 346



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 9/260 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K   H D  + + L+  + +      A        +++ +++NALISG AR  
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL +F  ++  G     FT+SS+   +   G+L++ + VH   +K       ++ +
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGN 292

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG ++ A   F   L+ D V + +M+  +   G   ++   F EMR  G+ L
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG-QKLDAV 233
           N+ +   +L A      VKEG+       +      + +++   +++L  R G      V
Sbjct: 353 NQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVT--VVDLLGRAGLLNYALV 410

Query: 234 KMFDEITEPDVVSWSERIAA 253
            +F    EP    W   +AA
Sbjct: 411 FIFKMPMEPTAAVWGALLAA 430



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 108/220 (49%), Gaps = 18/220 (8%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
            +   + ACA   +L+  + IH     +R++ D F+++++I +YCKCG++ +A + F K+
Sbjct: 53  VYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKM 112

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
            +  +  W +++ GYAQ+    E   L   M K   KP+  T+ ++L +   AG   ++ 
Sbjct: 113 RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA---AGAYADS- 168

Query: 600 TYLSCMSDLHGLIPQLEHY------ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
                   +H L  + + +      + ++D+  R G ++ A    D++    +   W +L
Sbjct: 169 ---GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNAL 224

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDN-ESTYVLLSNLYA 692
           +S     G+ +  L+      E+Q +  E+T+   S++++
Sbjct: 225 ISGFARKGDGETALMV---FAEMQRNGFEATHFTYSSIFS 261


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 161/464 (34%), Positives = 258/464 (55%), Gaps = 1/464 (0%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
            +++    + L   ++I A      F     + N+LI +Y KCG V +A  +FD +  KD
Sbjct: 57  FITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKD 116

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSW S+IAGY++N    +A+ +   ML+    PNG+T AS+L+AV          Q+H+
Sbjct: 117 MVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHA 176

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
             +K  +  D  + S L+  Y +C  ++ +  V  ++D KN V  NAL S          
Sbjct: 177 LAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGET 236

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           AL ++  +  +  E    T+S +  A A +  LEQGK +H   +K+R     FV + ++D
Sbjct: 237 ALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLD 296

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MY K G++ DA++ F ++    L  WN+M+  +AQ+G   E  + F +M K G+  ++I+
Sbjct: 297 MYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQIS 356

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +L +LT+C H GLV+E + Y   + + + L P++EHY  +VDLLGR GLL  A + I +M
Sbjct: 357 FLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKM 415

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
           P+ P A +W +LL+AC ++ N  +G  A   + +L PD+    VLL N+YAS G W+   
Sbjct: 416 PMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAA 475

Query: 702 KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
           ++RK MK   + KEP  SW+ +    H F A D +H +++EIYK
Sbjct: 476 RVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYK 519



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 178/349 (51%), Gaps = 8/349 (2%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFND 271
           L+N++++LY +CG  ++A K+FD++   D+VSW+  IA         EA GL   +    
Sbjct: 88  LDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR 147

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           F+ N +T  +LL +VG       G QI A   K  + E V +G+AL+ MY +CG+++ A 
Sbjct: 148 FKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMAT 207

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
           ++FD L  K+ VSWN++I+G++  G    AL +F  M         +T +SI  A++   
Sbjct: 208 AVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIG 267

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           +L+Q   VH+H+IKS   L   + + ++  Y K  ++ ++++V   +  K+ V  N++ +
Sbjct: 268 ALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT 327

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                    EA+  +  +  S   +N  +F  +L AC+    +++GK  H   +   Y+ 
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGK--HYFDMIKEYNL 385

Query: 512 DIFVES--AVIDMYCKCGTIEDAKR-AFRKICRDSLAGWNAMMMGYAQH 557
           +  +E    V+D+  + G +  A    F+     + A W A++     H
Sbjct: 386 EPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 11/370 (2%)

Query: 69  FDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK 125
            D L    L P    + + + AC    +L +   +H       F+   +L +  I  Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 126 SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV 185
            G +V A   F    + D V++T+++ GY  N    ++  +   M     + N F+  ++
Sbjct: 99  CGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 186 L---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP 242
           L   GA  D   G QIH   VK  +   V  ++ +A++++Y RCG+   A  +FD++   
Sbjct: 159 LKAVGAYADSGIGGQIHALAVKCDWHEDV--YVGSALLDMYARCGKMDMATAVFDKLDSK 216

Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
           + VSW+  I   A   DG  A  +F +++ N F+   +T  ++ S++ G   L  GK + 
Sbjct: 217 NGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVH 276

Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
           A   K        +GN ++ MY K G + DAR +F+ ++ KD V+WNSM+  +++ G   
Sbjct: 277 AHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGK 336

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +A+  F  M +  +  N  +   IL A S+   +K+       I +     +      ++
Sbjct: 337 EAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVV 396

Query: 420 TTYGKCNALN 429
              G+   LN
Sbjct: 397 DLLGRAGLLN 406



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 172/349 (49%), Gaps = 14/349 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  L  +LI  + K      A +     +N+D++++ +LI+G A+      A+ L   + 
Sbjct: 85  DAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGML 144

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
               +P+ FTF+SL+KA G+  ++ I   +H + +K  +   VY+ S  ++ YA+ G++ 
Sbjct: 145 KGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMD 204

Query: 131 SAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS 189
            A   F D LD  N V++ A++ G+   G+ + +  VF EM+  G E   F+ +++  A 
Sbjct: 205 MATAVF-DKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSAL 263

Query: 190 FDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
             +   ++G+ +H   +K      +   + N ++++Y + G  +DA K+F+ +   D+V+
Sbjct: 264 AGIGALEQGKWVHAHMIKS--RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVT 321

Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  + A      G EA   F+++R +   +N+ + + +L++     +++ GK       
Sbjct: 322 WNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIK 381

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSMIAG 351
           +      +     ++ + G+ G +N A   IF   +   +  W +++A 
Sbjct: 382 EYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAA 430



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 13/315 (4%)

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           H+    L P      + + A + SK+L  A ++H+H+  S F  D  + + LI  Y KC 
Sbjct: 41  HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCG 100

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           ++ E+ +V  ++  K+ V   +L +        AEA+ L   +     + NG TF+ +LK
Sbjct: 101 SVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLK 160

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           A  A  D   G  IH LA+K  + +D++V SA++DMY +CG ++ A   F K+   +   
Sbjct: 161 AVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM- 605
           WNA++ G+A+ G       +F +M + G +    TY ++ ++    G + + +   + M 
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMI 280

Query: 606 ---SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
                L   +        ++D+  + G +  A+   +++ +  D   W S+L+A   YG 
Sbjct: 281 KSRQKLTAFVGN-----TMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG- 333

Query: 663 IDLGLLAGSKLLELQ 677
             LG  A S   E++
Sbjct: 334 --LGKEAVSHFEEMR 346



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 11/261 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L +K   H D  + + L+  + +      A        +++ +++NALISG AR  
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVS 117
               AL +F  ++  G     FT+SS+  A    G+L++ + VH   +K       ++ +
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGN 292

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ YAKSG ++ A   F   L+ D V + +M+  +   G   ++   F EMR  G+ L
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFG-VKVGFLSGVCNHLNNAIMNLYVRCG-QKLDA 232
           N+ S   +L A      VKEG+  H F  +K   L     H    +++L  R G      
Sbjct: 353 NQISFLCILTACSHGGLVKEGK--HYFDMIKEYNLEPEIEHYVT-VVDLLGRAGLLNYAL 409

Query: 233 VKMFDEITEPDVVSWSERIAA 253
           V +F    EP    W   +AA
Sbjct: 410 VFIFKMPMEPTAAVWGALLAA 430



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 106/218 (48%), Gaps = 12/218 (5%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
            +   + ACA   +L+  + IH     +R+  D F+++++I +YCKCG++ +A + F K+
Sbjct: 53  VYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKM 112

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVR 596
               +  W +++ GYAQ+    E   L   M K   KP+  T+ ++L +      +G+  
Sbjct: 113 RNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGG 172

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           +    L+   D H     +   + ++D+  R G ++ A    D++    +   W +L+S 
Sbjct: 173 QIHA-LAVKCDWH---EDVYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALISG 227

Query: 657 CTIYGNIDLGLLAGSKLLELQPDN-ESTYVLLSNLYAS 693
               G+ +  L+      E+Q +  E+T+   S+++++
Sbjct: 228 FARKGDGETALMV---FAEMQRNGFEATHFTYSSIFSA 262


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 195/667 (29%), Positives = 331/667 (49%), Gaps = 119/667 (17%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-- 255
           +HG  +  GF      H+ N ++++Y +  +   A ++FDEI+EPD ++ +  ++  C  
Sbjct: 36  VHGNIITFGFQPHA--HILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCAS 93

Query: 256 ----------------------------------DGVEAFGLFKDLRFNDFQINEYTMIN 281
                                             DG  A  LF  ++   F+ +++T  +
Sbjct: 94  GDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYAS 153

Query: 282 LLSSVGGERILRAGKQ---IQAFCYKVGFMEVVSIGNALISMYGKCGQ----VNDARSIF 334
           +L+  G   ++   KQ     A   K G   V S+ NAL+S+Y +C      ++ AR +F
Sbjct: 154 VLA--GLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVF 211

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFN--------------------------------QAL 362
           D +  KD  SW +M+ GY +NG F+                                +AL
Sbjct: 212 DDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEAL 271

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS---GFLLDDSMISCLI 419
           +M   M+   +  + +T  S++ A +N++ L+   QVH+++++     F  D+S    L+
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNS----LV 327

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI-------WG- 471
           T Y KC   NE++ +  ++  K+ V  NAL S  V +    EA  +++ +       W  
Sbjct: 328 TLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 472 ------------------SCREVNG-----STFSIVLKACAAMTDLEQGKAIHCLALKAR 508
                             SC +  G       FS  +K+CA +     G+  H   +K  
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG 447

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           +D  +   +A+I MY KCG +E+A++ FR + C DS++ WNA++    QHG   E  +++
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-WNALIAALGQHGHGVEAVDVY 506

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M K G++PD IT+L VLT+C HAGLV + R Y + M  ++ + P  +HYA ++DLL R
Sbjct: 507 EEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCR 566

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G    A+  I+ +P  P A IW++LLS C ++GN++LG++A  KL  L P+++ TY+LL
Sbjct: 567 SGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLL 626

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SN+YA+ G W +V ++RK M+++ + KE   SWI +    H F   D+SH +++ +YK L
Sbjct: 627 SNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYL 686

Query: 748 IKLYEHM 754
             L + M
Sbjct: 687 QDLGKEM 693



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/575 (23%), Positives = 238/575 (41%), Gaps = 112/575 (19%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SLQ    VHG  +  GF    ++++  I+ Y KS E+  A   F +  + D +A T MV 
Sbjct: 29  SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88

Query: 153 GYVWNGEFDKSKEVFVE---------------------------------MRSLGLELNE 179
           GY  +G+   ++ VF E                                 M+  G + ++
Sbjct: 89  GYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDD 148

Query: 180 FSLTAVLGASF----DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL----D 231
           F+  +VL        D K+  Q H   +K G  +G    ++NA++++Y RC         
Sbjct: 149 FTYASVLAGLALVVDDEKQCVQFHAAALKSG--AGYVTSVSNALVSVYSRCASSPSLLHS 206

Query: 232 AVKMFDEITEPDVVSWSERIA----------------------------AACDGV----- 258
           A K+FD+I E D  SW+  +                             A   G      
Sbjct: 207 ARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGL 266

Query: 259 --EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             EA  + + +  +  +++E+T  +++ +    R+L+ GKQ+ A+  +          N+
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS-FHFDNS 325

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY------------------------ 352
           L+++Y KCG+ N+AR+IF+ +  KD VSWN++++GY                        
Sbjct: 326 LVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385

Query: 353 -------SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
                  +ENGF  + L +F  M      P  Y  +  +++ +   +     Q H+ ++K
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVK 445

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            GF    S  + LIT Y KC  + E+++V   +   ++V  NAL + L       EA+++
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDV 505

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYC 524
           Y  +       +  TF  VL AC+    ++QG K  + +    R        + +ID+ C
Sbjct: 506 YEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLC 565

Query: 525 KCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           + G   +A+     +     A  W A++ G   HG
Sbjct: 566 RSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 210/465 (45%), Gaps = 84/465 (18%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQN---RDIITYNALISGLARFCQSGPALKLFD 70
           D I  TT++S +    D   A R +F+      RD + YNA+I+G +       A+ LF 
Sbjct: 79  DKIARTTMVSGYCASGDIALA-RSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFC 137

Query: 71  RLRYQGLRPDAFTFSSLVKACGSLQENEI----VHGVCLKLGFSSRVYLVSGFIENYAKS 126
           +++++G +PD FT++S++     + ++E      H   LK G      + +  +  Y++ 
Sbjct: 138 KMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRC 197

Query: 127 GE----IVSAEMCFRD--------------------CLDLDN------------VAYTAM 150
                 + SA   F D                    C DL              VAY AM
Sbjct: 198 ASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAM 257

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGF 207
           + GYV  G + ++ E+   M S G+EL+EF+  +V+ A  + +    G+Q+H + ++   
Sbjct: 258 ISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRED 317

Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD----------- 256
            S    H +N+++ LY +CG+  +A  +F+++   D+VSW+  ++               
Sbjct: 318 FS---FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374

Query: 257 -----------------------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
                                  G E   LF  ++   F+  +Y     + S        
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q  A   K+GF   +S GNALI+MY KCG V +A+ +F  +   DSVSWN++IA   
Sbjct: 435 NGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALG 494

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           ++G   +A+D++  ML+  + P+  T  ++L A S++  + Q  +
Sbjct: 495 QHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK 539


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 189/646 (29%), Positives = 327/646 (50%), Gaps = 12/646 (1%)

Query: 86  SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
           SL+  C ++     +H + +  G S  +   +  +  Y   G +  A + F    + D  
Sbjct: 44  SLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLY 103

Query: 146 AYTAMVCGYVWNGEFDKSKEVF-VEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGF 201
           ++  M+  Y  N  + +  + +   +R    E +    + VL A  +++E   G ++H  
Sbjct: 104 SWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQ 163

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---V 258
            VKVG      + +   ++++Y +C +  D+ ++FDEI + +VV W+  I          
Sbjct: 164 IVKVGSPD---SFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLK 220

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
           E   LF  +R    + N+YT+ +L+++      L  GK +  +  K GF     +   L+
Sbjct: 221 EGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLL 280

Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
            +Y KCG + DA S+FD L   D VSW +MI GY++ G+  +AL +F       L+PN  
Sbjct: 281 DLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTV 340

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
           T +S+L A + + SL     VH   IK G   D +  + L+  Y KC+ + +++ V   +
Sbjct: 341 TTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFETV 399

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
             K+ +  N++ S         EALEL+  +       +  T   VL ACA++     G 
Sbjct: 400 FDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGS 459

Query: 499 AIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           ++H  A+KA      ++V +A+++ Y KCG  E A+  F ++   +   W+AM+ GY   
Sbjct: 460 SLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQ 519

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G       LF  M K  ++P+E+ +  +L++C H+G++ E   Y + M  ++  +P ++H
Sbjct: 520 GDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKH 579

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           YAC+VDLL R G LE A   I+++PI PD  +  + L  C ++   DLG +A  ++LEL 
Sbjct: 580 YACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELH 639

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           PD    YVL+SNLYAS G W+   ++ + MK++ L K PG+S + +
Sbjct: 640 PDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDI 685



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 287/572 (50%), Gaps = 22/572 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           +I++LL+ +G   D +  T L+S +  F     A R +FD  +N D+ ++  +I      
Sbjct: 57  KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECA-RLMFDRIRNPDLYSWKVMIRWYFLN 115

Query: 60  CQSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYL 115
                 ++ ++ RLR      D   FS ++KAC  L+E +    +H   +K+G S   ++
Sbjct: 116 DSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFV 174

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           ++G ++ YAK  E+  +   F + LD + V +T+M+ GYV N    +   +F  MR   +
Sbjct: 175 LTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLV 234

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           E N+++L +++ A      + +G+ +HG+ +K GF   + + L   +++LY +CG   DA
Sbjct: 235 EGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGF--DLNSFLVTPLLDLYFKCGDIRDA 292

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FDE++  D+VSW+  I          EA  LF D R+ D   N  T  ++LS+    
Sbjct: 293 FSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQT 352

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  G+ +     K+G  E  +  NAL+ MY KC  + DAR +F+ +  KD ++WNS+I
Sbjct: 353 GSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSII 411

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY++NG+  +AL++F  M   S+ P+  T+ S+L A ++  + +    +H + IK+G L
Sbjct: 412 SGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLL 471

Query: 410 LDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
                + + L+  Y KC     ++ +  E+ +KN +  +A+          + +LEL+  
Sbjct: 472 SGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGD 531

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           +     E N   F+ +L AC+    L +G +  + +     +   +   + ++D+  + G
Sbjct: 532 MLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAG 591

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
            +E+A     KI        +  ++G   HGC
Sbjct: 592 RLEEALDFIEKIPIQP----DVSLLGAFLHGC 619


>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 602

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 161/462 (34%), Positives = 271/462 (58%), Gaps = 2/462 (0%)

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G QI A   + GF + + + +AL+ +Y KC  + DA+ +FD +   D VSW S+I+G+S+
Sbjct: 120 GVQIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSK 179

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL-KQAMQVHSHIIKSGFLLDDS 413
           NG   +A+  F  ML   + PN  T  S++ A +  +++  Q   +H+H++K GF +   
Sbjct: 180 NGRGKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTF 239

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           ++SCLI  Y KC  ++++  +     +++ +  N++ S         EAL+L+  +  + 
Sbjct: 240 VVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNG 299

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
                 T + +L AC ++T L+QG+ +H L  K   + ++FV SA++DMY KCG+I++A+
Sbjct: 300 LNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEAR 359

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHA 592
             F +    +   W +M+ GYAQ G   E   LF ++ ++ G  PD I + AVLT+C HA
Sbjct: 360 CVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHA 419

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           G + +   Y + M   +GL+P L+ YAC+VDL  R G L  AK  ++ +P  P++ +W S
Sbjct: 420 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGS 479

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
            LS+C +YG  +LG  A  KL +++P + + YV ++++YA AG+W++V ++RK MK+K L
Sbjct: 480 FLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGL 539

Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            K  G+SW+ V    H F   D+SH +S++I  EL +L   M
Sbjct: 540 RKSAGWSWVEVDKRVHVFLVADASHPRSRDICVELERLNLEM 581



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 213/447 (47%), Gaps = 21/447 (4%)

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMN 221
           E F  M + G +  +F L   L +   +     G QIH   ++ GF   +   LN+A+++
Sbjct: 87  ESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL--FLNSALVD 144

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYT 278
           LY +C   +DA ++FD + + D VSW+  I+       G EA   FK++  +  + N  T
Sbjct: 145 LYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVT 204

Query: 279 MINLLSSVGG-ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            ++++S+  G E I      + A   K+GF     + + LI  Y KCG+++ A  +F   
Sbjct: 205 YVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTT 264

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
           I +D++ +NSMI+GYS+N F  +AL +F  M    L P  +T+ SIL A  +   L+Q  
Sbjct: 265 IERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGR 324

Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
           QVHS + K G   +  ++S L+  Y KC +++E++ V  +  +KN V   ++ +    + 
Sbjct: 325 QVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSG 384

Query: 458 CHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--QDIF 514
              E L L+ R +       +   F+ VL AC     L++G   +   ++  Y    D+ 
Sbjct: 385 RGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKG-IDYFNQMRRDYGLVPDLD 443

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMG---YAQHGCYHEVSNLFNKM 570
             + ++D+Y + G +  AK     I C  +   W + +     Y +     E ++   KM
Sbjct: 444 QYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKM 503

Query: 571 SKFGVKPDEITYLAVLTSCCHAGLVRE 597
                 P    Y+A+ +    AGL  E
Sbjct: 504 EPCSTAP----YVAMASIYAQAGLWSE 526



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 194/399 (48%), Gaps = 19/399 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I+ G   +  L++ L+  + K      A R     +  D +++ ++ISG ++  
Sbjct: 122 QIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNG 181

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ----ENEIVHGVCLKLGFSSRVYLV 116
           +   A+  F  +    ++P+  T+ S++ AC  L+    +  ++H   +KLGF  + ++V
Sbjct: 182 RGKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVV 241

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  I+ Y+K G I  A + F   ++ DN+ + +M+ GY  N   +++ ++FVEMR+ GL 
Sbjct: 242 SCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLN 301

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             + +LT++L   G+   +++G Q+H    K+G  S V   + +A++++Y +CG   +A 
Sbjct: 302 PTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNV--FVVSALLDMYSKCGSIDEAR 359

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGE 289
            +FD+  E + V W+  I   A +  G E  GLF+ L   + F  +      +L++    
Sbjct: 360 CVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHA 419

Query: 290 RILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNS 347
             L  G           G +  +     L+ +Y + G +  A+ + + +  + +SV W S
Sbjct: 420 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGS 479

Query: 348 MIAG---YSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
            ++    Y E     +A D    M   S  P    MASI
Sbjct: 480 FLSSCKLYGEAELGREAADKLFKMEPCSTAPY-VAMASI 517



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 153/310 (49%), Gaps = 5/310 (1%)

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
           +AL+ F  M      P  + + + L + +   +    +Q+H+ II++GF  +  + S L+
Sbjct: 84  EALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALV 143

Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
             Y KC+A+ ++KRV   ++K + V   ++ S         EA+  ++ + GS  + N  
Sbjct: 144 DLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCV 203

Query: 480 TFSIVLKACAAM-TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF-R 537
           T+  V+ AC  + T  +Q   +H   +K  +    FV S +ID Y KCG I+ A   F  
Sbjct: 204 TYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGT 263

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
            I RD++  +N+M+ GY+Q+    E   LF +M   G+ P + T  ++L +C    ++++
Sbjct: 264 TIERDNIL-FNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQ 322

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
            R   S ++ + G    +   + ++D+  + G ++ A+   DQ  +  +  +W S+++  
Sbjct: 323 GRQVHSLVAKM-GSESNVFVVSALLDMYSKCGSIDEARCVFDQ-AVEKNTVLWTSMITGY 380

Query: 658 TIYGNIDLGL 667
              G    GL
Sbjct: 381 AQSGRGPEGL 390


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 193/673 (28%), Positives = 341/673 (50%), Gaps = 22/673 (3%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           GS+   ++ HG  +K   +  +YL++  +  Y K  E+  A   F    + + +++ +++
Sbjct: 61  GSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLI 120

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFL 208
            GY   G ++++ E+F+E R   L+L++F+    LG      D+  GE +HG  V  G  
Sbjct: 121 SGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLS 180

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE------RIAAACDGVEAFG 262
             V   L N ++++Y +CG+   A+ +FD   E D VSW+       R+ AA    E   
Sbjct: 181 QQV--FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAA---EEPLN 235

Query: 263 LFKDLRFNDFQINEYTMINLLSSVG---GERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           L   +  +   +  Y + ++L +      E  +  G  I  +  K+G    + +  AL+ 
Sbjct: 236 LLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLD 295

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE-----NGFFNQALDMFCHMLEFSLI 374
           MY K G + +A  +F  +  K+ V++N+MI+G+ +     +   ++A  +F  M    L 
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P+  T + +L+A S +K+L+   Q+H+ I K+ F  D+ + S LI  Y    +  +  + 
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
            +   K++     ++    V       A +L+R ++ S       T S+++ ACA    L
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
             G+ I   A+K+  D    V+++ I MY K G +  A + F ++    +A ++AM+   
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
           AQHG  +E  N+F  M   G+KP++  +L VL +CCH GLV +   Y  CM + + + P 
Sbjct: 536 AQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPN 595

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
            +H+ C+VDLLGR G L  A+  I           W++LLS+C +Y +  +G     +L+
Sbjct: 596 EKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLM 655

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
           EL+P+   +YVLL N+Y  +G+ +   ++R+ M+++ + KEP  SWI +G  TH F   D
Sbjct: 656 ELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVAD 715

Query: 735 SSHSQSKEIYKEL 747
            SH  S+ IY  L
Sbjct: 716 LSHPSSQMIYTML 728



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 251/537 (46%), Gaps = 24/537 (4%)

Query: 36  RFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS- 93
           R LFD    R+II++N+LISG  +      A++LF   R   L+ D FT++  +  CG  
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161

Query: 94  --LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
             L   E++HG+ +  G S +V+L++  I+ Y+K G++  A   F  C + D V++ +++
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-------SFDVKEGEQIHGFGVK 204
            GYV  G  ++   +  +M   GL L  ++L +VL A        F +++G  IH +  K
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGF-IEKGMAIHCYTAK 280

Query: 205 VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-------- 256
           +G    +   +  A++++Y + G   +A+K+F  +   +VV+++  I+            
Sbjct: 281 LGMEFDIV--VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338

Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             EAF LF D++    + +  T   +L +    + L  G+QI A   K  F     IG+A
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           LI +Y   G   D    F     +D  SW SMI  + +N     A D+F  +    + P 
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            YT++ ++ A ++  +L    Q+  + IKSG     S+ +  I+ Y K   +  + +V  
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           E+   +    +A+ S L       EAL ++ ++     + N   F  VL AC     + Q
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578

Query: 497 G-KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR-AFRKICRDSLAGWNAMM 551
           G K   C+    R + +    + ++D+  + G + DA+        +D    W A++
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 212/453 (46%), Gaps = 22/453 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L++ NG      L   LI  ++K     +A         RD +++N+LISG  R   
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC------GSLQENEIVHGVCLKLGFSSRVYL 115
           +   L L  ++   GL    +   S++KAC      G +++   +H    KLG    + +
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-----DKSKEVFVEM 170
            +  ++ YAK+G +  A   F      + V Y AM+ G++   E       ++ ++F++M
Sbjct: 290 RTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349

Query: 171 RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCG 227
           +  GLE +  + + VL A    K    G QIH    K  F S     + +A++ LY   G
Sbjct: 350 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD--EFIGSALIELYALMG 407

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLS 284
              D ++ F   ++ D+ SW+  I       +   AF LF+ L  +  +  EYT+  ++S
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467

Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
           +      L +G+QIQ +  K G     S+  + ISMY K G +  A  +F  +   D  +
Sbjct: 468 ACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVAT 527

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           +++MI+  +++G  N+AL++F  M    + PN      +L A  +   + Q ++ +   +
Sbjct: 528 YSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK-YFQCM 586

Query: 405 KSGFLL--DDSMISCLITTYGKCNALNESKRVL 435
           K+ + +  ++   +CL+   G+   L++++ ++
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLI 619



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 177/367 (48%), Gaps = 22/367 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+    K G   D ++ T L+  + K    + A +      +++++TYNA+ISG  +  +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333

Query: 62  -----SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
                S  A KLF  ++ +GL P   TFS ++KAC    +L+    +H +  K  F S  
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ S  IE YA  G       CF      D  ++T+M+  +V N + + + ++F ++ S 
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453

Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +   E++++ ++ A  D   +  GEQI G+ +K G        +  + +++Y + G   
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGI--DAFTSVKTSSISMYAKSGNMP 511

Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMIN-LLSSV 286
            A ++F E+  PDV ++S  I++        EA  +F+ ++ +  + N+   +  L++  
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571

Query: 287 GGERILRAGKQIQAFC--YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SV 343
            G  + +  K  Q     Y++   E       L+ + G+ G+++DA ++     F+D  V
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNE--KHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629

Query: 344 SWNSMIA 350
           +W ++++
Sbjct: 630 TWRALLS 636



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L+ KN    D  + + LI  +          +    T  +DI ++ ++I    +  
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   A  LF +L    +RP+ +T S ++ AC    +L   E + G  +K G  +   + +
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAKSG +  A   F +  + D   Y+AM+     +G  +++  +F  M++ G++ 
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558

Query: 178 NEFSLTAVLGA 188
           N+ +   VL A
Sbjct: 559 NQQAFLGVLIA 569



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 27/241 (11%)

Query: 466 YRTIWGSCREVNGST----FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           YR +   C+  N +     + I+ +  A    +  GK  H   +K+  +  +++ + +++
Sbjct: 31  YRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLN 90

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MYCKC  +  A++ F ++   ++  +N+++ GY Q G Y +   LF +  +  +K D+ T
Sbjct: 91  MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLI------PQLEHYACIVDLLGRVGLLEGAK 635
           Y   L  C         R  L     LHGL+       Q+     ++D+  + G L+ A 
Sbjct: 151 YAGALGFCGE-------RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 203

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPD--NESTYVLLSNLY 691
              D+     D   W SL+S     G  +  L LLA     ++  D  N +TY L S L 
Sbjct: 204 SLFDRCD-ERDQVSWNSLISGYVRVGAAEEPLNLLA-----KMHRDGLNLTTYALGSVLK 257

Query: 692 A 692
           A
Sbjct: 258 A 258



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI    IK+G      + T+ IS + K  +   A +   + QN D+ TY+A+IS LA+  
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLK 106
            +  AL +F+ ++  G++P+   F  ++ AC  G L    + +  C+K
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMK 587


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 184/547 (33%), Positives = 300/547 (54%), Gaps = 11/547 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
           N I+  Y +  +   A ++FDE  +PD VS++  I+   D  E   A  LFK +R   F+
Sbjct: 78  NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           ++ +T+  L+++      L   KQ+  F    GF    S+ NA ++ Y K G + +A S+
Sbjct: 138 VDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195

Query: 334 FDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           F  +   +D VSWNSMI  Y ++    +AL ++  M+      + +T+AS+L A+++   
Sbjct: 196 FYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC---NALNESKRVLSEIDKKNAVHINAL 449
           L    Q H  +IK+GF  +  + S LI  Y KC   + +++S++V  EI   + V  N +
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTM 315

Query: 450 ASVLVYASCHAE-ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
            S       H+E A++ +R +       +  +F  V  AC+ ++   QGK IH LA+K+ 
Sbjct: 316 ISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSN 375

Query: 509 YDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
              + I V +A+I +Y K G + DA+R F ++   +   +N M+ GYAQHG   E   L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLY 435

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
            +M   G+ P+ IT++A+L++C H G V E + Y + M +   + P+ EHY+C++DLLGR
Sbjct: 436 QRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGR 495

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G LE A+  ID MP  P +  W +LL AC  + N+ L   A  +L+ +QP   + YV+L
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVML 555

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +N+YA AG W ++  +RK M+ K + K+PG SWI V    H F A D SH   +E+ + L
Sbjct: 556 ANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL 615

Query: 748 IKLYEHM 754
            ++ + M
Sbjct: 616 EEMMKKM 622



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 213/422 (50%), Gaps = 19/422 (4%)

Query: 36  RFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA-CGS 93
           R LFD   + D ++YN LISG A   ++  A+ LF R+R  G   D FT S L+ A C  
Sbjct: 94  RQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDR 153

Query: 94  LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVC 152
           +   + +H   +  GF S   + + F+  Y+K G +  A   F     L D V++ +M+ 
Sbjct: 154 VDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIV 213

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--SFD-VKEGEQIHGFGVKVGFLS 209
            Y  + E  K+  ++ EM   G +++ F+L +VL A  S D +  G Q HG  +K GF  
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273

Query: 210 GVCNHLNNAIMNLYVRCGQK---LDAVKMFDEITEPDVVSWSERIAAAC----DGVEAFG 262
              +H+ + +++ Y +CG +    D+ K+F EI  PD+V W+  I+          EA  
Sbjct: 274 N--SHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVK 331

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF-MEVVSIGNALISMY 321
            F+ ++    + ++ + + + S+         GKQI     K       +S+ NALIS+Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLY 391

Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
            K G + DAR +FD +   ++VS+N MI GY+++G   +AL ++  ML+  + PN  T  
Sbjct: 392 YKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFV 451

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEID 439
           +IL A ++   + +  Q + + +K  F ++      SC+I   G+   L E++R +  + 
Sbjct: 452 AILSACAHCGKVDEG-QKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510

Query: 440 KK 441
            K
Sbjct: 511 YK 512



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 213/433 (49%), Gaps = 13/433 (3%)

Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
           V+  +  ++ YAK  +I  A   F +    D V+Y  ++ GY    E   +  +F  MR 
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRE 133

Query: 173 LGLELNEFSLTAVLGASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           LG E++ F+L+ ++ A  D V   +Q+H F V  GF S   + +NNA +  Y + G   +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDS--YSSVNNAFVTYYSKGGLLRE 191

Query: 232 AVKMFDEITE-PDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           AV +F  +    D VSW+  I A     +G +A  L+K++ F  F+I+ +T+ ++L+++ 
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG---QVNDARSIFDYLIFKDSVS 344
               L  G+Q      K GF +   +G+ LI  Y KCG    ++D+  +F  ++  D V 
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVL 311

Query: 345 WNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           WN+MI+GYS N     +A+  F  M      P+  +   +  A SN  S  Q  Q+H   
Sbjct: 312 WNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLA 371

Query: 404 IKSGFLLDD-SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
           IKS    +  S+ + LI+ Y K   L +++RV   + + NAV  N +           EA
Sbjct: 372 IKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVID 521
           L LY+ +  S    N  TF  +L ACA    +++G K  + +    + + +    S +ID
Sbjct: 432 LRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMID 491

Query: 522 MYCKCGTIEDAKR 534
           +  + G +E+A+R
Sbjct: 492 LLGRAGKLEEAER 504



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 213/475 (44%), Gaps = 57/475 (12%)

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG---------------- 325
           LL SV  ER L  GK + A   K        + N  +++Y KCG                
Sbjct: 15  LLKSVA-ERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN 73

Query: 326 ---------------QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
                          +++ AR +FD     D+VS+N++I+GY++      A+ +F  M E
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRE 133

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
                +G+T++ ++ A  +   L +  Q+H   +  GF    S+ +  +T Y K   L E
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIK--QLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLRE 191

Query: 431 SKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           +  V   +D  ++ V  N++          A+AL LY+ +     +++  T + VL A  
Sbjct: 192 AVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG---TIEDAKRAFRKICRDSLAG 546
           ++  L  G+  H   +KA + Q+  V S +ID Y KCG    + D+++ F++I    L  
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVL 311

Query: 547 WNAMMMGYAQHGCY-HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
           WN M+ GY+ +  +  E    F +M + G +PD+ +++ V ++C +     + +      
Sbjct: 312 WNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGK------ 365

Query: 606 SDLHGL-----IP--QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             +HGL     IP  ++     ++ L  + G L  A+   D+MP   +A  +  ++    
Sbjct: 366 -QIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP-ELNAVSFNCMIKGYA 423

Query: 659 IYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
            +G+    L    ++L+  + P+N  T+V + +  A  G  ++  K    MKE F
Sbjct: 424 QHGHGTEALRLYQRMLDSGIAPNN-ITFVAILSACAHCGKVDEGQKYFNTMKETF 477



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 19/268 (7%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTK------FADFRRAFRFLFDTQNRDIITYNALIS 54
           Q +  LIK G H +  + + LI  ++K       +D  + F+ +      D++ +N +IS
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP---DLVLWNTMIS 317

Query: 55  GLARFCQ-SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGF- 109
           G +   + S  A+K F +++  G RPD  +F  +  AC +L    + + +HG+ +K    
Sbjct: 318 GYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIP 377

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           S+R+ + +  I  Y KSG ++ A   F    +L+ V++  M+ GY  +G   ++  ++  
Sbjct: 378 SNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQR 437

Query: 170 MRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M   G+  N  +  A+L A      V EG++      +   +     H  + +++L  R 
Sbjct: 438 MLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY-SCMIDLLGRA 496

Query: 227 GQKLDAVKMFDEIT-EPDVVSWSERIAA 253
           G+  +A +  D +  +P  V+W+  + A
Sbjct: 497 GKLEEAERFIDAMPYKPGSVAWAALLGA 524



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           +F  +L    A  DL  GK++H L +K+      ++ +  +++Y KCG +  A+ AF   
Sbjct: 10  SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
              ++  +N ++  YA+    H    LF++      +PD ++Y  +++
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDE----NPQPDTVSYNTLIS 113


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 191/591 (32%), Positives = 311/591 (52%), Gaps = 17/591 (2%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE------GEQI 198
           + +  M+ GY        + E+F  MR  G+  + +++ AV  +S           G+ +
Sbjct: 85  IVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAV 144

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV 258
           H    ++GF S +   + + ++N Y       DA K+F+E+ E DVVSW+  I+A     
Sbjct: 145 HALVQRIGFASDL--FVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCG 202

Query: 259 EAFGLFK---DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +   + +   +++    + N+ T+I+LLS+ G  R +  G  + A   + G    V I N
Sbjct: 203 QWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRN 262

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI MY KCG ++DA   F  +  +++ SWN++I G+ +NG   +AL MF  ML   +IP
Sbjct: 263 ALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIP 322

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +  T+ S+L   +    L+Q   +H++I       D  + + LI  Y KC  +  ++ + 
Sbjct: 323 DVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIF 382

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIV--LKACAAMTD 493
             + +++ V   A+    V       A  L+  +    R+V  S  ++V  L AC+ +  
Sbjct: 383 ENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDM--KVRDVMASEMALVSLLSACSQLGA 440

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
           L++G+ IH    +     D+++ESA++DMY KCG I+ A   F ++       WNAM+ G
Sbjct: 441 LDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGG 500

Query: 554 YAQHGCYHEVSNLFNKMSKF-GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
            A  G   E   LF ++ K    KPD IT   VL +C H G+V E   Y + M  L G++
Sbjct: 501 LASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTL-GIV 559

Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
           P  EHY CIVDLLGR GLL+ A   I +MPI P+  IW SLL+AC ++  ++LG + G  
Sbjct: 560 PDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQH 619

Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           +++L P++   +VL+SNL+A  G W+DV ++R  M  + + K PG+S I V
Sbjct: 620 IIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/559 (23%), Positives = 257/559 (45%), Gaps = 26/559 (4%)

Query: 1   QIYSLLIKNGHHLDPILS---TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           +++  L++     DP ++    TL++      D   A +          I +N +I G  
Sbjct: 36  ELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYN 95

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE------NEIVHGVCLKLGFSS 111
                  AL+LF  +R  G+ PD +T +++ ++  +          + VH +  ++GF+S
Sbjct: 96  SCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFAS 155

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            ++++SG I  Y  S  +  A   F +  + D V++T M+  +   G++D       EM+
Sbjct: 156 DLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQ 215

Query: 172 SLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           S G + N+ ++ ++L A   V+   +G  ++    + G  + V   + NA++ +YV+CG 
Sbjct: 216 SEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADV--DIRNALIGMYVKCGC 273

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDGV-------EAFGLFKDLRFNDFQINEYTMIN 281
             DA K F  +   +  SW+  I    DG        EA  +F+++  +    +  T+++
Sbjct: 274 MSDAWKTFKGMPIRNTKSWNTLI----DGFVQNGKHKEALTMFEEMLSDGVIPDVITLVS 329

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LS+      L+ G+ +  +         + + N+LI+MY KCG +  A  IF+ +  +D
Sbjct: 330 VLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRD 389

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSW +M+ GY +   F  A ++F  M    ++ +   + S+L A S   +L +  ++HS
Sbjct: 390 IVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHS 449

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
           +I +     D  + S L+  Y KC  ++ +  + S +  K  +  NA+   L       E
Sbjct: 450 YIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKE 509

Query: 462 ALELYRTIWG-SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           A+ L+  +      + +  T  +VL AC  +  +++G     L L      D      ++
Sbjct: 510 AVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIV 569

Query: 521 DMYCKCGTIEDAKRAFRKI 539
           D+  + G +++A    +K+
Sbjct: 570 DLLGRAGLLDEAYNFIQKM 588



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 227/519 (43%), Gaps = 45/519 (8%)

Query: 232 AVKMFDEITEPDVVSWSERIAA--ACDG-VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A K+FD + +P  + W+  I    +C   ++A  LF+ +R +    + YTM  +  S   
Sbjct: 72  ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAA 131

Query: 289 ERILRA---GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
               +    G  + A   ++GF   + + + LI+ YG    V DAR +F+ +  +D VSW
Sbjct: 132 FASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSW 191

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
             MI+ +++ G ++  L     M      PN  T+ S+L A    +++ + + V++ + +
Sbjct: 192 TLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDE 251

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G   D  + + LI  Y KC  ++++ +    +  +N    N L    V    H EAL +
Sbjct: 252 YGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTM 311

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +       +  T   VL   A + DL+QG+ +H          DI +++++I+MY K
Sbjct: 312 FEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAK 371

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG +  A+  F  + R  +  W AM+ GY +   +    NLF+ M    V   E+  +++
Sbjct: 372 CGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSL 431

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM---- 641
           L++C   G + + R   S + +   +   +   + +VD+  + G ++ A     +M    
Sbjct: 432 LSACSQLGALDKGREIHSYIKE-KSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQ 490

Query: 642 -------------------------------PIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
                                             PDA   + +L ACT  G +D GL   
Sbjct: 491 TLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYF 550

Query: 671 SKLLELQ--PDNESTYVLLSNLYASAGMWNDVGKLRKEM 707
           + +L L   PDNE  Y  + +L   AG+ ++     ++M
Sbjct: 551 NLMLTLGIVPDNEH-YGCIVDLLGRAGLLDEAYNFIQKM 588



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 165/361 (45%), Gaps = 13/361 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +Y+ + + G   D  +   LI  + K      A++       R+  ++N LI G  +  +
Sbjct: 245 VYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGK 304

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL +F+ +   G+ PD  T  S++      G LQ+   +H           + L + 
Sbjct: 305 HKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNS 364

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  YAK G++ +AE+ F +    D V++TAMVCGYV   +F  +  +F +M+   +  +
Sbjct: 365 LINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMAS 424

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E +L ++L A      + +G +IH +  +    + +   L +A++++Y +CG    A ++
Sbjct: 425 EMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMW--LESALVDMYAKCGCIDAAAEI 482

Query: 236 FDEITEPDVVSWSERI---AAACDGVEAFGLFKD-LRFNDFQINEYTMINLLSSVGGERI 291
           F  +     ++W+  I   A+   G EA  LF+  L+  D + +  T+  +L +     +
Sbjct: 483 FSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGM 542

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIA 350
           +  G         +G +        ++ + G+ G +++A +    + I  + V W S++A
Sbjct: 543 VDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLA 602

Query: 351 G 351
            
Sbjct: 603 A 603


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 175/573 (30%), Positives = 297/573 (51%), Gaps = 26/573 (4%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G  IH   +  G  + +   ++ A++++YV+C    DA  +F  +   D+V+W+  +A  
Sbjct: 29  GRAIHRHAIHAGLQADL--FVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLA-- 84

Query: 255 CDGVEAFGLFK---------DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY-- 303
             G    G++           ++ +  + N  T++ LL  +  +  L  G  + A+C   
Sbjct: 85  --GYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRA 142

Query: 304 --------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
                   K    + V +G AL+ MY KCG +  AR +FD +  ++ V+W+++I G+   
Sbjct: 143 CLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLC 202

Query: 356 GFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
               QA  +F  ML   L   +  ++AS L A ++   L+   Q+H+ + KSG   D + 
Sbjct: 203 SRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTA 262

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L++ Y K   ++++  +  E+  K+ V  +AL S  V      EA  +++ +     
Sbjct: 263 GNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNV 322

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E + +T   ++ AC+ +  L+ G+  H   +      +  + +A+IDMY KCG I+ +++
Sbjct: 323 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQ 382

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  +    +  WN M+ GY  HG   E + LF +M+  G  PD +T++ +L++C H+GL
Sbjct: 383 VFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGL 442

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E + +   M   +GL P++EHY C+VDLL R G L+ A   I  MP+  D  +W +LL
Sbjct: 443 VIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            AC +Y NIDLG      + EL P+    +VLLSN+Y++AG +++  ++R   K +   K
Sbjct: 503 GACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKK 562

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            PG SWI + G  H F  GD SH QS EIY+EL
Sbjct: 563 SPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 219/469 (46%), Gaps = 27/469 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   I  G   D  +ST L+  + K A    A         RD++ +NA+++G A    
Sbjct: 32  IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 91

Query: 62  SGPALK--LFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCL----------K 106
              A+   L  +++   LRP+A T  +L+      G+L +   VH  C+          K
Sbjct: 92  YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
              +  V L +  ++ YAK G ++ A   F      + V ++A++ G+V      ++  +
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211

Query: 167 FVEMRSLGL-ELNEFSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           F  M + GL  L+  S+ + L   AS D ++ GEQ+H    K G  + +     N+++++
Sbjct: 212 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTA--GNSLLSM 269

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y + G    A+ +FDE+   D VS+S  ++         EAF +FK ++  + + +  TM
Sbjct: 270 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 329

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++L+ +      L+ G+         G     SI NALI MY KCG+++ +R +F+ +  
Sbjct: 330 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPS 389

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +D VSWN+MIAGY  +G   +A  +F  M      P+G T   +L A S+S  + +    
Sbjct: 390 RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHW 449

Query: 400 HSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
             H++  G+ L   M    C++    +   L+E+   +  +  +  V +
Sbjct: 450 F-HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRV 497



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 241/508 (47%), Gaps = 35/508 (6%)

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           LR++ + P+ +TF   +KAC +L ++     +H   +  G  + +++ +  ++ Y K   
Sbjct: 2   LRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE--VFVEMRSLGLELNEFSLTA-- 184
           +  A   F      D VA+ AM+ GY  +G +  +    + ++M+   L  N  +L A  
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 185 -VLGASFDVKEGEQIHGFGV----------KVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +L     + +G  +H + +          K     GV   L  A++++Y +CG  L A 
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL--LGTALLDMYAKCGSLLYAR 178

Query: 234 KMFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQ-INEYTMINLLSSVGGE 289
           ++FD +   + V+WS  I     C  + +AF LFK +       ++  ++ + L +    
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             LR G+Q+ A   K G    ++ GN+L+SMY K G ++ A ++FD +  KD+VS+++++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY +NG   +A  +F  M   ++ P+  TM S++ A S+  +L+     H  +I  G  
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            + S+ + LI  Y KC  ++ S++V + +  ++ V  N + +         EA  L+  +
Sbjct: 359 SETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 418

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAI-----HCLALKARYDQDIFVESAVIDMYC 524
                  +G TF  +L AC+    + +GK       H   L  R +  I     ++D+  
Sbjct: 419 NNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLLS 474

Query: 525 KCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           + G +++A    + +  R  +  W A++
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALL 502



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 213/444 (47%), Gaps = 32/444 (7%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N YT    L +         G+ I       G    + +  AL+ MY KC  + DA  IF
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-----LIPNGYTMASILEAVSN 389
             +  +D V+WN+M+AGY+ +G ++ A+    H+L        L PN  T+ ++L  ++ 
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAV---AHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 390 SKSLKQAMQVHSHIIK--------SGFLLDDSMI--SCLITTYGKCNALNESKRVLSEID 439
             +L Q   VH++ I+        S   L D ++  + L+  Y KC +L  ++RV   + 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQG 497
            +N V  +AL    V  S   +A  L++ +   G C  ++ ++ +  L+ACA++  L  G
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMG 244

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + +H L  K+    D+   ++++ MY K G I+ A   F ++       ++A++ GY Q+
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR-TYLSCMSDLHGLIPQLE 616
           G   E   +F KM    V+PD  T ++++ +C H   ++  R ++ S +  + GL  +  
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI--IRGLASETS 362

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
               ++D+  + G ++ ++   + MP   D   W ++++   I+G   LG  A +  LE+
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGKEATALFLEM 418

Query: 677 Q----PDNESTYVLLSNLYASAGM 696
                P +  T++ L +  + +G+
Sbjct: 419 NNLGFPPDGVTFICLLSACSHSGL 442



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 11/214 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++LL K+G H D     +L+S + K     +A     +   +D ++Y+AL+SG  +  
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A  +F +++   + PDA T  SL+ AC    +LQ     HG  +  G +S   + +
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  +   F      D V++  M+ GY  +G   ++  +F+EM +LG   
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425

Query: 178 NEFSLTAVLGA---SFDVKEGEQI-----HGFGV 203
           +  +   +L A   S  V EG+       HG+G+
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGL 459



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 138/338 (40%), Gaps = 21/338 (6%)

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN YT    L+A S          +H H I +G   D  + + L+  Y KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVL 485
           L ++  + + +  ++ V  NA+ +   +     HA A  L   +       N ST   +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 486 KACAAMTDLEQGKAIHCLALKA----------RYDQDIFVESAVIDMYCKCGTIEDAKRA 535
              A    L QG ++H   ++A          +    + + +A++DMY KCG++  A+R 
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG---VKPDEITYLAVLTSCCHA 592
           F  +   +   W+A++ G+       +   LF  M   G   + P  I   + L +C   
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
             +R      + ++   G+   L     ++ +  + GL++ A    D+M +  D   + +
Sbjct: 239 DHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSA 296

Query: 653 LLSACTIYGNIDLGLLAGSKL--LELQPDNESTYVLLS 688
           L+S     G  +   L   K+    ++PD  +   L+ 
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 175/573 (30%), Positives = 297/573 (51%), Gaps = 26/573 (4%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G  IH   +  G  + +   ++ A++++YV+C    DA  +F  +   D+V+W+  +A  
Sbjct: 29  GRAIHRHAIHAGLQADL--FVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLA-- 84

Query: 255 CDGVEAFGLFK---------DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY-- 303
             G    G++           ++ +  + N  T++ LL  +  +  L  G  + A+C   
Sbjct: 85  --GYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRA 142

Query: 304 --------KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
                   K    + V +G AL+ MY KCG +  AR +FD +  ++ V+W+++I G+   
Sbjct: 143 CLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLC 202

Query: 356 GFFNQALDMFCHMLEFSL-IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
               QA  +F  ML   L   +  ++AS L A ++   L+   Q+H+ + KSG   D + 
Sbjct: 203 SRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTA 262

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L++ Y K   ++++  +  E+  K+ V  +AL S  V      EA  +++ +     
Sbjct: 263 GNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNV 322

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E + +T   ++ AC+ +  L+ G+  H   +      +  + +A+IDMY KCG I+ +++
Sbjct: 323 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQ 382

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  +    +  WN M+ GY  HG   E + LF +M+  G  PD +T++ +L++C H+GL
Sbjct: 383 VFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGL 442

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E + +   M   +GL P++EHY C+VDLL R G L+ A   I  MP+  D  +W +LL
Sbjct: 443 VIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            AC +Y NIDLG      + EL P+    +VLLSN+Y++AG +++  ++R   K +   K
Sbjct: 503 GACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKK 562

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            PG SWI + G  H F  GD SH QS EIY+EL
Sbjct: 563 SPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 219/469 (46%), Gaps = 27/469 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+   I  G   D  +ST L+  + K A    A         RD++ +NA+++G A    
Sbjct: 32  IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 91

Query: 62  SGPALK--LFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCL----------K 106
              A+   L  +++   LRP+A T  +L+      G+L +   VH  C+          K
Sbjct: 92  YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151

Query: 107 LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV 166
              +  V L +  ++ YAK G ++ A   F      + V ++A++ G+V      ++  +
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211

Query: 167 FVEMRSLGL-ELNEFSLTAVLG--ASFD-VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           F  M + GL  L+  S+ + L   AS D ++ GEQ+H    K G  + +     N+++++
Sbjct: 212 FKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTA--GNSLLSM 269

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTM 279
           Y + G    A+ +FDE+   D VS+S  ++         EAF +FK ++  + + +  TM
Sbjct: 270 YAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATM 329

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           ++L+ +      L+ G+         G     SI NALI MY KCG+++ +R +F+ +  
Sbjct: 330 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPS 389

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           +D VSWN+MIAGY  +G   +A  +F  M      P+G T   +L A S+S  + +    
Sbjct: 390 RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHW 449

Query: 400 HSHIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
             H++  G+ L   M    C++    +   L+E+   +  +  +  V +
Sbjct: 450 F-HVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRV 497



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 233/488 (47%), Gaps = 34/488 (6%)

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
           LR++ + P+ +TF   +KAC +L ++     +H   +  G  + +++ +  ++ Y K   
Sbjct: 2   LRHR-VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE--VFVEMRSLGLELNEFSLTA-- 184
           +  A   F      D VA+ AM+ GY  +G +  +    + ++M+   L  N  +L A  
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 185 -VLGASFDVKEGEQIHGFGV----------KVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +L     + +G  +H + +          K     GV   L  A++++Y +CG  L A 
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL--LGTALLDMYAKCGSLLYAR 178

Query: 234 KMFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQ-INEYTMINLLSSVGGE 289
           ++FD +   + V+WS  I     C  + +AF LFK +       ++  ++ + L +    
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             LR G+Q+ A   K G    ++ GN+L+SMY K G ++ A ++FD +  KD+VS+++++
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 298

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           +GY +NG   +A  +F  M   ++ P+  TM S++ A S+  +L+     H  +I  G  
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
            + S+ + LI  Y KC  ++ S++V + +  ++ V  N + +         EA  L+  +
Sbjct: 359 SETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 418

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAI-----HCLALKARYDQDIFVESAVIDMYC 524
                  +G TF  +L AC+    + +GK       H   L  R +  I     ++D+  
Sbjct: 419 NNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMVDLLS 474

Query: 525 KCGTIEDA 532
           + G +++A
Sbjct: 475 RGGFLDEA 482



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 210/443 (47%), Gaps = 30/443 (6%)

Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
           N YT    L +         G+ I       G    + +  AL+ MY KC  + DA  IF
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-----LIPNGYTMASILEAVSN 389
             +  +D V+WN+M+AGY+ +G ++ A+    H+L        L PN  T+ ++L  ++ 
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAV---AHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 390 SKSLKQAMQVHSHIIK--------SGFLLDDSMI--SCLITTYGKCNALNESKRVLSEID 439
             +L Q   VH++ I+        S   L D ++  + L+  Y KC +L  ++RV   + 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQG 497
            +N V  +AL    V  S   +A  L++ +   G C  ++ ++ +  L+ACA++  L  G
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF-LSPTSIASALRACASLDHLRMG 244

Query: 498 KAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQH 557
           + +H L  K+    D+   ++++ MY K G I+ A   F ++       ++A++ GY Q+
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304

Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
           G   E   +F KM    V+PD  T ++++ +C H   ++  R     +  + GL  +   
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSI 363

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
              ++D+  + G ++ ++   + MP   D   W ++++   I+G   LG  A +  LE+ 
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG---LGKEATALFLEMN 419

Query: 678 ----PDNESTYVLLSNLYASAGM 696
               P +  T++ L +  + +G+
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGL 442



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 11/214 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++LL K+G H D     +L+S + K     +A     +   +D ++Y+AL+SG  +  
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           ++  A  +F +++   + PDA T  SL+ AC    +LQ     HG  +  G +S   + +
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICN 365

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  +   F      D V++  M+ GY  +G   ++  +F+EM +LG   
Sbjct: 366 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 425

Query: 178 NEFSLTAVLGA---SFDVKEGEQI-----HGFGV 203
           +  +   +L A   S  V EG+       HG+G+
Sbjct: 426 DGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGL 459



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 138/338 (40%), Gaps = 21/338 (6%)

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           ML   + PN YT    L+A S          +H H I +G   D  + + L+  Y KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASC--HAEALELYRTIWGSCREVNGSTFSIVL 485
           L ++  + + +  ++ V  NA+ +   +     HA A  L   +       N ST   +L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 486 KACAAMTDLEQGKAIHCLALKA----------RYDQDIFVESAVIDMYCKCGTIEDAKRA 535
              A    L QG ++H   ++A          +    + + +A++DMY KCG++  A+R 
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG---VKPDEITYLAVLTSCCHA 592
           F  +   +   W+A++ G+       +   LF  M   G   + P  I   + L +C   
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
             +R      + ++   G+   L     ++ +  + GL++ A    D+M +  D   + +
Sbjct: 239 DHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSA 296

Query: 653 LLSACTIYGNIDLGLLAGSKL--LELQPDNESTYVLLS 688
           L+S     G  +   L   K+    ++PD  +   L+ 
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 210/726 (28%), Positives = 349/726 (48%), Gaps = 89/726 (12%)

Query: 41  TQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACG---SL 94
           T +R +  YNA I     FCQ G    A++L    +   L  +  T+SS+++ C    SL
Sbjct: 61  TIDRQVTDYNAKI---LHFCQLGNLENAMELVCMCQKSEL--ETKTYSSVLQLCAGSKSL 115

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV-AYTAMVCG 153
            + + VH +      +    L    +  YA  G++      F D ++  NV  +  MV  
Sbjct: 116 TDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVF-DTMEKKNVYLWNFMVSE 174

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
           Y   G+F +S  +F  M   G+E                                     
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIE------------------------------------- 197

Query: 214 HLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIAA-ACDGVEAFGL--FKDLRF 269
                        G++ + A ++FD++ + DV+SW+  I+    +G+   GL  +K + +
Sbjct: 198 -------------GKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMY 244

Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND 329
               ++  T+I++L        L  GK + +   K  F   ++  N L+ MY KCG ++ 
Sbjct: 245 LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDG 304

Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSN 389
           A  +F+ +  ++ VSW SMIAGY+ +G  + A+ +   M +  +  +     SIL A + 
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACAR 364

Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
           S SL     VH +I  +    +  + + L+  Y KC +++ +  V S +  K+ +  N +
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTM 424

Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
              L                     + +  T + +L ACA+++ LE+GK IH   L+  Y
Sbjct: 425 IGEL---------------------KPDSRTMACILPACASLSALERGKEIHGYILRNGY 463

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
             D  V +A++D+Y KCG +  A+  F  I    L  W  M+ GY  HG  +E    FN+
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNE 523

Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
           M   G++PDE++++++L +C H+GL+ +   +   M +   + P+LEHYAC+VDLL R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
            L  A   I+ +PI PDA IW +LL  C IY +I+L      ++ EL+P+N   YVLL+N
Sbjct: 584 NLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 643

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG-DSSHSQSKEIYKELI 748
           +YA A  W +V ++R+++ +K L K PG SWI + G  + F +G +SSH  SK+I   L 
Sbjct: 644 IYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLK 703

Query: 749 KLYEHM 754
           K+   M
Sbjct: 704 KMRRKM 709



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 215/442 (48%), Gaps = 55/442 (12%)

Query: 21  LISHFTKFADFRRA---FRF----------------LFDTQ-NRDIITYNALISGLARFC 60
           ++S + K  DF+ +   F+                 LFD   +RD+I++N++ISG     
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNG 230

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   L+++ ++ Y G+  D  T  S++  C   G+L   + VH + +K  F  R+   +
Sbjct: 231 LTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSN 290

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++  A   F    + + V++T+M+ GY  +G  D +  +  +M   G++L
Sbjct: 291 TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKL 350

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCGQKLD 231
           +  + T++L A   S  +  G+ +H + +K   +     VC    NA+M++Y +CG    
Sbjct: 351 DVVATTSILHACARSGSLDNGKDVHDY-IKANNMESNLFVC----NALMDMYTKCGSMDG 405

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           A  +F  +   D++SW+  I                   + + +  TM  +L +      
Sbjct: 406 ANSVFSTMVVKDIISWNTMIG------------------ELKPDSRTMACILPACASLSA 447

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK+I  +  + G+     + NAL+ +Y KCG +  AR +FD +  KD VSW  MI+G
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISG 507

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G+ N+A+  F  M +  + P+  +  SIL A S+S  L+Q  +   +I+K+ F ++
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIE 566

Query: 412 DSM--ISCLITTYGKCNALNES 431
             +   +C++    +   L+++
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKA 588



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 138/606 (22%), Positives = 265/606 (43%), Gaps = 74/606 (12%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL----KLFDRLRYQGL 77
           I HF +  +   A   +   Q  ++ T     S + + C    +L    K+   ++   +
Sbjct: 73  ILHFCQLGNLENAMELVCMCQKSELET--KTYSSVLQLCAGSKSLTDGKKVHSIIKSNNV 130

Query: 78  RPD---AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV---- 130
             D        SL   CG L+E   V     K      VYL +  +  YAK G+      
Sbjct: 131 AVDEVLGLKLVSLYATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESIC 186

Query: 131 ----------------SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
                           SA   F    D D +++ +M+ GYV NG  ++  E++ +M  LG
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG 246

Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           ++++  ++ +VL     S  +  G+ +H   +K  F   +  + +N ++++Y +CG    
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRI--NFSNTLLDMYSKCGDLDG 304

Query: 232 AVKMFDEITEPDVVSWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+++F+++ E +VVSW+  IA    DG    A  L + +     +++     ++L +   
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACAR 364

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK +  +         + + NAL+ MY KCG ++ A S+F  ++ KD +SWN+M
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTM 424

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           I                       L P+  TMA IL A ++  +L++  ++H +I+++G+
Sbjct: 425 IG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGY 463

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             D  + + L+  Y KC  L  ++ +   I  K+ V    + S         EA+  +  
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNE 523

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKC 526
           +  +  E +  +F  +L AC+    LEQG     + +K  ++ +  +E  + ++D+  + 
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRT 582

Query: 527 GTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITY 582
           G +  A        I  D+   W A++ G      YH++  L  K+++  F ++P+   Y
Sbjct: 583 GNLSKAYEFIETLPIAPDATI-WGALLCGCR---IYHDIE-LAEKVAERVFELEPENTGY 637

Query: 583 LAVLTS 588
             +L +
Sbjct: 638 YVLLAN 643



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 167/359 (46%), Gaps = 30/359 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++SL IK+        S TL+  ++K  D   A R       R+++++ ++I+G  R  +
Sbjct: 273 VHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGR 332

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           S  A++L  ++  +G++ D    +S++ AC   GSL   + VH         S +++ + 
Sbjct: 333 SDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNA 392

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y K G +  A   F   +  D +++  M+             E+  + R++   L 
Sbjct: 393 LMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI------------GELKPDSRTMACIL- 439

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
                A L A   ++ G++IHG+ ++ G+ S    H+ NA+++LYV+CG    A  +FD 
Sbjct: 440 --PACASLSA---LERGKEIHGYILRNGYSSD--RHVANALVDLYVKCGVLGLARLLFDM 492

Query: 239 ITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D+VSW+  I+       G EA   F ++R    + +E + I++L +     +L  G
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 296 KQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
            +   +  K  F     + +   ++ +  + G ++ A    + L I  D+  W +++ G
Sbjct: 553 WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 177/534 (33%), Positives = 288/534 (53%), Gaps = 11/534 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVSWSERIAA 253
           G Q H   +K G  +     + N+++ LY + G  L +A ++FD +   D++SW+  I  
Sbjct: 79  GIQFHSHAIKSGLDTD--RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITG 136

Query: 254 ACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                   ++  LF ++     + N +T+  ++ +  G   LR GK         GF   
Sbjct: 137 YVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLN 196

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML- 369
             I  ALI MYG+   V+DA  +F  L   D++ W S+I+ ++ N  +++AL  F  M  
Sbjct: 197 DVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCR 256

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
           +  L P+G+T  ++L A  N   LKQ  +VH+ +I SG   +  + S L+  YGKC  +N
Sbjct: 257 KHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVN 316

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           +S+ V   +  KN V   AL        C     E    I+   ++V+  +F  VL+ACA
Sbjct: 317 QSQCVFDRMSVKNLVSWTALLG----GYCQNGDFESVIRIFREGKKVDTYSFGTVLRACA 372

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
            +  + QGK +HC  +K    +D+  ESA++D+Y KCG I+ A R F ++   +L  WN+
Sbjct: 373 GLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNS 432

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           M+ G+AQ+G   EV  LF++M + G++PD I+++ VL +C HAGLV + + Y + M++++
Sbjct: 433 MIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVY 492

Query: 610 GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLA 669
            + P +EHY C++DLLGR GLLE A+  I+      +  +W  LL AC    +       
Sbjct: 493 EIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERI 552

Query: 670 GSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
             K +EL+PD+  +YV L+N+Y + G W+D  K+R  M ++ + K PG SWI  
Sbjct: 553 AKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIET 606



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 248/513 (48%), Gaps = 24/513 (4%)

Query: 56  LARFCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGF 109
           + ++C+SG    A+ + + + +  L    F ++SL++ C    S       H   +K G 
Sbjct: 32  IIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGL 91

Query: 110 SSRVYLVSGFIENYAKSGE-IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV 168
            +  ++ +  +  Y K G  +  A   F      D +++T+M+ GYV   +  KS E+F+
Sbjct: 92  DTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFL 151

Query: 169 EMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
           EM  LG+E N F+L+AV+ A     D++ G+  HG  +  GF   + + ++ A++++Y R
Sbjct: 152 EMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGF--DLNDVISTALIDMYGR 209

Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDL-RFNDFQINEYTMIN 281
                DA+ +F E+ +PD + W+  I+A        +A G F  + R +    + +T   
Sbjct: 210 NSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGT 269

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L++ G    L+ GK++ A     G    V + ++L+ MYGKC  VN ++ +FD +  K+
Sbjct: 270 VLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKN 329

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSW +++ GY +NG F   + +F    +     + Y+  ++L A +   +++Q  +VH 
Sbjct: 330 LVSWTALLGGYCQNGDFESVIRIFREGKKV----DTYSFGTVLRACAGLAAVRQGKEVHC 385

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
             +K     D    S L+  Y KC  ++ + R+   +  +N +  N++           E
Sbjct: 386 QYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGE 445

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAV 519
             +L+  +       +  +F  VL AC+    ++QGK  +  A+   Y+    +E  + +
Sbjct: 446 VFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKK-YFAAMTEVYEIKPGIEHYNCM 504

Query: 520 IDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
           ID+  + G +E+A+       CRD  + W  ++
Sbjct: 505 IDLLGRAGLLEEAENLIENANCRDEPSLWTVLL 537



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 234/483 (48%), Gaps = 32/483 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFA----DFRRAFRFLFDTQNRDIITYNALISGL 56
           Q +S  IK+G   D  +  +L++ + K      + RR F  LF    +D+I++ ++I+G 
Sbjct: 81  QFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLF---YKDLISWTSMITGY 137

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
            +  +   +L+LF  +   G+ P+ FT S+++KAC   G L+  +  HGV +  GF    
Sbjct: 138 VKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLND 197

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RS 172
            + +  I+ Y ++  +  A + F +    D + +T+++  +  N  +DK+   F  M R 
Sbjct: 198 VISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRK 257

Query: 173 LGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
            GL  + F+   VL A  +   +K+G+++H   +  G    V   + ++++++Y +C   
Sbjct: 258 HGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNV--FVESSLVDMYGKCRLV 315

Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +  +FD ++  ++VSW+  +   C   +   + +  R    +++ Y+   +L +  G 
Sbjct: 316 NQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFREGK-KVDTYSFGTVLRACAGL 374

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             +R GK++     K      V   +AL+ +Y KCG ++ A  IF  +  ++ ++WNSMI
Sbjct: 375 AAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMI 434

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ-----AMQVHSHII 404
            G+++NG   +   +F  M+E  + P+  +   +L A S++  + Q     A     + I
Sbjct: 435 YGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEI 494

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV---YASCHAE 461
           K G        +C+I   G+   L E++ +   I+  N     +L +VL+    AS H+ 
Sbjct: 495 KPGI----EHYNCMIDLLGRAGLLEEAENL---IENANCRDEPSLWTVLLGACAASPHSA 547

Query: 462 ALE 464
             E
Sbjct: 548 TAE 550


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 218/767 (28%), Positives = 377/767 (49%), Gaps = 40/767 (5%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDI-ITYNALISGLARFCQSGP--ALKLFDRLRYQ-GL 77
           +SH  +     +A   LFD+  R   + +N +I G    C + P  AL  + R+R     
Sbjct: 44  LSHLCRQGHPHQALH-LFDSIPRPTTVLWNTIIIGF--ICNNMPIDALLFYARMRASPSP 100

Query: 78  RPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---SGEIVS 131
           + D++TFSS +KAC    SL+  + +H   L+  F S   + +  +  Y+        + 
Sbjct: 101 KFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLG 160

Query: 132 AEMCFRDCLDL-----------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               F +C DL           + VA+  M+  YV      ++ ++F  M  +G+     
Sbjct: 161 TAYDFNNC-DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPV 219

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           S   V  A +   D      ++G  VK+G        + ++ + +Y   G    A ++FD
Sbjct: 220 SFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFD 279

Query: 238 EITEPDVVSWSERIAAACDG---VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILR 293
              E +   W+  I         +EA  LF + +    F +++ T ++ L+++   + L 
Sbjct: 280 CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLD 339

Query: 294 AGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS 353
            G+Q+ A+  K   +  V I NA+I MY +CG +  +  +F  ++ +D V+WN+M++ + 
Sbjct: 340 LGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFV 399

Query: 354 ENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
           +NG  ++ L +   M +   + +  T+ ++L   SN +S +   Q H+++I+ G   +  
Sbjct: 400 QNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-G 458

Query: 414 MISCLITTYGKCNALNESKRVL---SEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           M   LI  Y K   +  ++++    S  D+  A   NA+ +         E   ++R + 
Sbjct: 459 MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATW-NAMIAGYTQNGLSEEGFAVFRKMI 517

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N  T + +L AC  M  +  GK IH  A++   +Q++FV +A++DMY K G I 
Sbjct: 518 EQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAIT 577

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
            A+  F +    +   +  M++ Y QHG      +LF+ M   G+KPD +T++A+L++C 
Sbjct: 578 YAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACS 637

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA-HI 649
           +AGLV E       M   + + P  EHY C+ D+LGRVG +  A   +  +    +   I
Sbjct: 638 YAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRI 697

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST--YVLLSNLYASAGMWNDVGKLRKEM 707
           W SLL AC I+G  +LG +  +KLLE++  +  T  +VLLSN+YA+ G W++V ++RKEM
Sbjct: 698 WGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEM 757

Query: 708 KEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           ++K L KE G SW+ V G+ + F + D  H Q  EIY+ L KL   M
Sbjct: 758 RQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEM 804



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 144/310 (46%), Gaps = 16/310 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K+   L  ++   +I  +++      +F+   +   RD++T+N ++S   +  
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                L L   ++ QG   D+ T ++L+    +L+  EI    H   ++ G   +   + 
Sbjct: 403 LDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI--QFEGMD 460

Query: 118 GF-IENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           G+ I+ YAKSG I +A+  F      D D   + AM+ GY  NG  ++   VF +M    
Sbjct: 461 GYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN 520

Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           +  N  +L ++L A   +     G+QIHGF ++      V   +  A++++Y + G    
Sbjct: 521 VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNV--FVGTALLDMYSKSGAITY 578

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A  +F E  E + V+++  I +      G  A  LF  +  +  + +  T + +LS+   
Sbjct: 579 AENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSY 638

Query: 289 ERILRAGKQI 298
             ++  G +I
Sbjct: 639 AGLVDEGLRI 648


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 256/461 (55%), Gaps = 31/461 (6%)

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G +  AR++FD +   ++  WN+MI GYS +    +AL ++ HML  S+  N YT   +L
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +A S+  +L++  Q+H+HIIK GF  +    + L+  Y K   +  ++ +  ++D+++ V
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 445 HINALA-------------------------------SVLVYASCHAEALELYRTIWGSC 473
             N++                                S  V A    EAL L+  +  + 
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            +++       L+ACA +  L+QGK IH    K   + D  +   +IDMY KCG +E+A 
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             FRK+    ++ W AM+ GYA HG   E    F KM   GV+P+++T+  +LT+C HAG
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV EA+     M  +HG  P +EHY C+VDLLGR GLL+ A+  I+ MP+ P+A IW +L
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L+AC I+GN++LG   G  L+++ P +   Y+ L++++A+AG WN   ++R++MKE+ + 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           K PG S I V G  H F AGD SH Q KEI   L ++ E +
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERL 526



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 176/422 (41%), Gaps = 36/422 (8%)

Query: 173 LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           L  E N      +L    +++E  QIHG  +K G +                  G    A
Sbjct: 12  LSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYA 71

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD I  P+   W+  I   + + +  EA  L+  + ++    N YT   LL +    
Sbjct: 72  RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L   +QI A   K+GF   +   N+L+++Y K G +  AR +FD +  +D+VSWNSMI
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIP-------------------------------NGY 378
            GY++ G    A ++F HM E ++I                                +  
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            + S L+A ++   L Q   +H++I K    +D  +   LI  Y KC  L E+  V  ++
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           ++K      A+ S         EALE +  +  +  E N  TF+ +L AC+    + + K
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371

Query: 499 AI-HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQ 556
            +   +     +   I     ++D+  + G +++A+     +  + + A W A++     
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431

Query: 557 HG 558
           HG
Sbjct: 432 HG 433



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 179/393 (45%), Gaps = 46/393 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAF-RFLFDTQNR-DIITYNALISGLAR 58
           QI+  ++K G  LD I ++ L++          A+ R +FD   R +   +N +I G + 
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
             +   AL L+  + Y  +  +A+TF  L+KAC S   L+E + +H   +K+GF S +Y 
Sbjct: 96  SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYT 155

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV------- 168
            +  +  Y+KSG+I SA + F      D V++ +M+ GY   GE + + E+F        
Sbjct: 156 TNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI 215

Query: 169 ------------------------EMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGF 201
                                    M++ G++L+  +L + L A  D   + +G+ IH +
Sbjct: 216 ISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAY 275

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
             K      +   L   ++++Y +CG   +A+++F ++ E  V  W+  I+       G 
Sbjct: 276 IKKHEI--EIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGR 333

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNAL 317
           EA   F  ++    + N+ T   +L++     ++   K +     ++ GF   +     +
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCM 393

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           + + G+ G + +A  + + +  K + + W +++
Sbjct: 394 VDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 178/544 (32%), Positives = 287/544 (52%), Gaps = 13/544 (2%)

Query: 225 RCGQKLDAVKMFDE-ITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMI 280
           R  ++ +   +F+  + + DV SW+  IA    + D  EA   F  +R         +  
Sbjct: 21  RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
             + +      + +GKQ     +  G+   + + +ALI MY  CG++ DAR +FD +  +
Sbjct: 81  CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHML------EFSLIPNGYTMASILEAVSNSKSLK 394
           + VSW SMI GY  NG    A+ +F  +L      + ++  +   + S++ A S   +  
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKRVLSEIDKKNAVHINALASV 452
               +HS +IK GF    S+ + L+  Y K     +  ++++  +I  K+ V  N++ SV
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260

Query: 453 LVYASCHAEALELYRT-IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
              +    EA E++R  +       N  T S VL A +    L  GK IH   ++   + 
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+ V +++IDMYCKCG +E A++AF ++   ++  W AM+ GY  HG   +   LF  M 
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             GV+P+ IT+++VL +C HAGL  E   + + M    G+ P LEHY C+VDLLGR G L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A   I +M + PD+ IW SLL+AC I+ N++L  ++ ++L EL   N   Y+LLS++Y
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 500

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A AG W DV ++R  MK + L K PG+S + + G  H F  GD  H Q ++IY+ L +L 
Sbjct: 501 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560

Query: 752 EHMV 755
             ++
Sbjct: 561 RKLL 564



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 185/364 (50%), Gaps = 20/364 (5%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVH 101
           D+ ++N++I+ LAR   S  AL  F  +R   L P   +F   +KAC SL +    +  H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
                 G+ S +++ S  I  Y+  G++  A   F +    + V++T+M+ GY  NG   
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 162 KSKEVFVEM------RSLGLELNEFSLTAVLGASFDVKEG---EQIHGFGVKVGFLSGVC 212
            +  +F ++          + L+   L +V+ A   V      E IH F +K GF  GV 
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 213 NHLNNAIMNLYVRCGQKLDAV--KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
             + N +++ Y + G+   AV  K+FD+I + D VS++  ++  A  G+  EAF +F+ L
Sbjct: 220 --VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277

Query: 268 RFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
             N     N  T+  +L +V     LR GK I     ++G  + V +G ++I MY KCG+
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           V  AR  FD +  K+  SW +MIAGY  +G   +AL++F  M++  + PN  T  S+L A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397

Query: 387 VSNS 390
            S++
Sbjct: 398 CSHA 401



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 29/271 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAF-RFLFDT-QNRDIITYNALISGLARF 59
           I+S +IK G      +  TL+  + K  +   A  R +FD   ++D ++YN+++S  A+ 
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 60  CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
             S  A ++F RL + + +  +A T S+++ A    G+L+  + +H   +++G    V +
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y K G + +A   F    + +  ++TAM+ GY  +G   K+ E+F  M   G+
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 176 ELNEFSLTAVLGAS------------FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             N  +  +VL A             F+  +G     FGV+ G     C      +++L 
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----FGVEPGLEHYGC------MVDLL 434

Query: 224 VRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
            R G    A  +   +  +PD + WS  +AA
Sbjct: 435 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
 gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 195/645 (30%), Positives = 325/645 (50%), Gaps = 49/645 (7%)

Query: 157 NGEFDKSKEVF--VEMR-----SLGLELNEFSLTAV-LGASFDVKEGEQIHGFGVKVGFL 208
           +G+  KS E F  +++R     S  L L   S+  V    S  +  G+Q+HG  +  G +
Sbjct: 52  HGQLSKSFEAFSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLV 111

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFK 265
               + L + ++  Y       +A  + +        SW+  I +         A   +K
Sbjct: 112 ED--SFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYK 169

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +     + + +T  ++L + G  + L+ G ++            + + NALISMYG+CG
Sbjct: 170 QMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCG 229

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGF---------------------------- 357
           +V+ AR++FD ++ +D+VSWNSMI+ YS  G                             
Sbjct: 230 EVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAG 289

Query: 358 -------FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
                  F QAL +   M  F +  +   M   L A S+  +++   ++H   I+    +
Sbjct: 290 GCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHM 349

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
             ++ + L+T Y +C  +  +  +    D K+ +  N++ S L +     EAL L+R + 
Sbjct: 350 LSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELL 409

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD-IFVESAVIDMYCKCGTI 529
               E +  TF+ +L  CA + DL+ G+  HC   K R  +D + + +A++DMY + G +
Sbjct: 410 LFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKV 469

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
            +AKR F  + +     + +++ GY   G   +   LF +M +F +KPD IT +AVL++C
Sbjct: 470 SEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSAC 529

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H+GLV +A    + M  +HGL P+LEHYAC+ DL GRVGLL  AK  I +MP  P + I
Sbjct: 530 SHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAI 589

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W +L+ AC I+GN+D+G  A  KLLE++P++   YVL++N+YA+AG W+ + ++R  M++
Sbjct: 590 WATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRD 649

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             + K PG SW+ VG     F  GD+S  Q+ E    L  LY+ M
Sbjct: 650 SGVAKIPGCSWVDVGSEFISFSVGDTSSPQALESKLLLDSLYDVM 694



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 233/505 (46%), Gaps = 53/505 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
           Q++  +I +G   D  L + L+  ++   +F      L +T N     ++N LI+   + 
Sbjct: 100 QLHGHIISSGLVEDSFLVSKLVMFYSSL-EFLPEAHTLVETSNLFRPCSWNILITSYVKH 158

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                A+  + ++  +G+RPD FTF S++KACG  Q  +    VH           +++ 
Sbjct: 159 KLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVH 218

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY---------------------- 154
           +  I  Y + GE+ +A   F + L+ D V++ +M+  Y                      
Sbjct: 219 NALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLE 278

Query: 155 ----VWN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQI 198
                WN         G F ++ ++  +MR+ G+ L++ ++   LGA      ++ G++I
Sbjct: 279 INVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEI 338

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
           HGF ++      + + + NA++ +Y RC     A  +F    +   ++W+  ++      
Sbjct: 339 HGFTIR--HYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLG 396

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIG 314
              EA  LF++L     + +  T  ++L        L+ G++   +  K   F + + + 
Sbjct: 397 RVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLW 456

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           NAL+ MY + G+V++A+ IF  L  KD V++ S+IAGY   G   +A+ +F  M  F + 
Sbjct: 457 NALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIK 516

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKR 433
           P+  TM ++L A S+S  + QA  + + +    G        +C+   +G+   LN++K 
Sbjct: 517 PDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKE 576

Query: 434 VLSEIDKKNAVHINALASVLVYASC 458
           +++ +  +     +A+ + L+ A C
Sbjct: 577 IITRMPYRPT---SAIWATLIGACC 598



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 123/297 (41%), Gaps = 14/297 (4%)

Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
           RT +    ++   + SI+L +C   + L  GK +H   + +   +D F+ S ++  Y   
Sbjct: 68  RTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSL 127

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
             + +A              WN ++  Y +H  Y      + +M   GV+PD  T+ ++L
Sbjct: 128 EFLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSIL 187

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
            +C     ++        ++          H A ++ + GR G ++ A+   D M +  D
Sbjct: 188 KACGETQNLKFGLEVHKSINSWSTPWSLFVHNA-LISMYGRCGEVDTARNLFDNM-LERD 245

Query: 647 AHIWQSLLSACTIYG----NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
           A  W S++S  +  G      +L     SK LE+   N  T+ +++      G +    K
Sbjct: 246 AVSWNSMISCYSSRGMWREAFELFESMQSKCLEI---NVVTWNIIAGGCLRVGNFTQALK 302

Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
           L  +M+   +  +     I +G  +H       +    KEI+   I+ Y HM++T +
Sbjct: 303 LLSQMRNFGIHLDDVAMIIGLGACSH-----IGAIRLGKEIHGFTIRHYHHMLSTVQ 354


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 204/715 (28%), Positives = 357/715 (49%), Gaps = 43/715 (6%)

Query: 56  LARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYL 115
           L+  CQ  P     D   Y+ L      F +  K+ GSL   ++ HG  +K   +  +YL
Sbjct: 35  LSSLCQ--PKNTALDSEAYKKL------FQTAAKS-GSLVLGKLAHGHMVKSSLNPCLYL 85

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           ++  +  Y K  E+  A   F    + + +++ +++ GY   G ++++ E+F+E R   L
Sbjct: 86  LNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNL 145

Query: 176 ELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           +L++F+    LG      D+  G+ +HG  V  G    V   L N ++++Y +CG+   A
Sbjct: 146 KLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQV--FLINVLIDMYSKCGKLDQA 203

Query: 233 VKMFDEITEPDVVSWSE------RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
           + +FD   E D VSW+       R+ AA    E   L   +     ++  Y + ++L + 
Sbjct: 204 MSLFDRCNERDQVSWNSLISGYVRVGAA---EEPLNLLAKMHRAGLKLTTYALGSVLKAC 260

Query: 287 G---GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
                E ++  G  I  +  K+G    + +  AL+ MY K G + +A  +F  +  K+ V
Sbjct: 261 CINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVV 320

Query: 344 SWNSMIAGYSE-----NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           ++N+MI+G+ +     +   ++A  +F  M    L P+  T + +L+A S +K+L+   Q
Sbjct: 321 TYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 380

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +H+ I K+ F  D+ + S LI  Y    +  +  +  +   K++      +AS      C
Sbjct: 381 IHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD------IASWTSIIDC 434

Query: 459 HAE------ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           H +      A +L+R ++ S       T S+++ ACA    L  G+ I   A+K+  D  
Sbjct: 435 HVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAY 494

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
             V+++ I MY K G +  A + F ++    +A ++AM+   AQHG  H+  N+F  M  
Sbjct: 495 TSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKT 554

Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
            G+KP++  +L VL +CCH GLV     Y   M + +G+ P  +H+ C+ DLLGR G L 
Sbjct: 555 RGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLS 614

Query: 633 GAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYA 692
            A+  I          +W++LLS+C +Y +  +G     +L+EL+P+   +YVLL N+Y 
Sbjct: 615 DAENLILSSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 674

Query: 693 SAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
            +G+ +   ++R+ M+++ + KEP  SWI +G  TH F   D SH  S+ IY  L
Sbjct: 675 DSGVNSSAEEVRELMRDRGVKKEPALSWIVLGNQTHSFAVADWSHPSSQMIYTML 729



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 227/471 (48%), Gaps = 20/471 (4%)

Query: 36  RFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS- 93
           R LFD    R+II++N+LISG  +      A++LF   R   L+ D FT++  +  CG  
Sbjct: 103 RQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGER 162

Query: 94  --LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
             L   +++HG+ +  G S +V+L++  I+ Y+K G++  A   F  C + D V++ +++
Sbjct: 163 CDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLI 222

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA------SFDVKEGEQIHGFGVKV 205
            GYV  G  ++   +  +M   GL+L  ++L +VL A         +++G  IH +  K+
Sbjct: 223 SGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKL 282

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDGV----- 258
           G    +   +  A++++Y + G   +A+K+F  +   +VV+++  I+     D +     
Sbjct: 283 GMEFDIV--VRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEAS 340

Query: 259 -EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            EAF LF +++    + +  T   +L +    + L  G+QI A   K  F     IG+AL
Sbjct: 341 SEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 400

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I +Y   G   D    F     +D  SW S+I  + +N     A D+F  +    + P  
Sbjct: 401 IELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEE 460

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
           YT++ ++ A ++  +L    Q+  + IKSG     S+ +  I+ Y K   +  + +V  E
Sbjct: 461 YTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIE 520

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           +   +    +A+ S L       +AL ++ ++     + N   F  VL AC
Sbjct: 521 VQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIAC 571



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 210/453 (46%), Gaps = 22/453 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           ++ L++ NG      L   LI  ++K     +A   LFD  N RD +++N+LISG  R  
Sbjct: 171 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS-LFDRCNERDQVSWNSLISGYVRVG 229

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC------GSLQENEIVHGVCLKLGFSSRVY 114
            +   L L  ++   GL+   +   S++KAC      G +++   +H    KLG    + 
Sbjct: 230 AAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIV 289

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-----DKSKEVFVE 169
           + +  ++ YAK+G +  A   F      + V Y AM+ G++   +       ++ ++F+E
Sbjct: 290 VRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFME 349

Query: 170 MRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           M+  GLE +  + + VL A    K    G QIH    K  F S     + +A++ LY   
Sbjct: 350 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD--EFIGSALIELYALM 407

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLL 283
           G   D ++ F   ++ D+ SW+  I       +   AF LF+ L  +  +  EYT+  ++
Sbjct: 408 GSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMM 467

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           S+      L +G+QIQ +  K G     S+  + ISMY K G +  A  +F  +   D  
Sbjct: 468 SACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVA 527

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           ++++MI+  +++G  + AL++F  M    + PN      +L A  +   +   +     +
Sbjct: 528 TYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTM 587

Query: 404 IKS-GFLLDDSMISCLITTYGKCNALNESKRVL 435
             S G   ++   +CL    G+   L++++ ++
Sbjct: 588 KNSYGINPNEKHFTCLADLLGRTGRLSDAENLI 620



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++L+ KN    D  + + LI  +          +    T  +DI ++ ++I    +  
Sbjct: 380 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNE 439

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
           Q   A  LF +L    +RP+ +T S ++ AC    +L   E + G  +K G  +   + +
Sbjct: 440 QLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKT 499

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAKSG +  A   F +  + D   Y+AM+     +G    +  +F  M++ G++ 
Sbjct: 500 SSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKP 559

Query: 178 NEFSLTAVLGA 188
           N+ +   VL A
Sbjct: 560 NQQAFLGVLIA 570



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI    IK+G      + T+ IS + K  +   A +   + QN D+ TY+A+IS LA+  
Sbjct: 481 QIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHG 540

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGV 103
            +  AL +F+ ++ +G++P+   F  ++ AC  G L    + HGV
Sbjct: 541 SAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGL----VTHGV 581



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 20/216 (9%)

Query: 466 YRTIWGSCREVNGS----TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           YR +   C+  N +     +  + +  A    L  GK  H   +K+  +  +++ + +++
Sbjct: 32  YRFLSSLCQPKNTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLN 91

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MYCKC  +  A++ F ++   ++  +N+++ GY Q G Y +   LF +     +K D+ T
Sbjct: 92  MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFT 151

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLI------PQLEHYACIVDLLGRVGLLEGAK 635
           Y   L  C         R  L     LHGL+       Q+     ++D+  + G L+ A 
Sbjct: 152 YAGALGFCGE-------RCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 204

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLA 669
              D+     D   W SL+S     G  +  L LLA
Sbjct: 205 SLFDRCN-ERDQVSWNSLISGYVRVGAAEEPLNLLA 239


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 189/634 (29%), Positives = 319/634 (50%), Gaps = 39/634 (6%)

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGV 203
           Y  ++ GY   G  D++  ++V+M  +G+  ++++   +L A   +    EG Q+HG  +
Sbjct: 98  YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEA 260
           K+G    +   ++N++++ Y  CG+     K+FD + E +VVSW+  I          EA
Sbjct: 158 KMGLEGDI--FVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEA 215

Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
             LF  +     + N  TM+ ++S+    + L  GK++ ++  ++G      + NAL+ M
Sbjct: 216 VSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDM 275

Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
           Y KCG +  AR IFD    K+ V +N++++ Y  + + +  L +   ML+    P+  TM
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTM 335

Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA------------- 427
            S + A +    L      H++++++G    D++ + +I  Y KC               
Sbjct: 336 LSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPN 395

Query: 428 ------------------LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
                             +  + R+  E+ +++ V  N +   LV  S   EA+EL+R +
Sbjct: 396 KTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREM 455

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                  +  T   +  AC  +  L+  K +     K     D+ + +A++DM+ +CG  
Sbjct: 456 QNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDP 515

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
             A   F+++ +  ++ W A +   A  G       LFN+M +  VKPD++ ++A+LT+C
Sbjct: 516 SSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTAC 575

Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
            H G V + R     M   HG+ P + HY C+VDLLGR GLLE A   I  MPI P+  +
Sbjct: 576 SHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV 635

Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
           W SLL+AC  + N++L   A  KL +L P+    +VLLSN+YASAG W DV ++R +MKE
Sbjct: 636 WGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKE 695

Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEI 743
           K + K PG S I V G  H F +GD SH+++  I
Sbjct: 696 KGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHI 729



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 210/462 (45%), Gaps = 54/462 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQ-NRDIITYNALISGLARF 59
           Q++  ++K G   D  +S +LI HF          R LFD    R+++++ +LI+G +  
Sbjct: 151 QVHGAVLKMGLEGDIFVSNSLI-HFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGR 209

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVC---LKLGFSSRVYLV 116
             S  A+ LF ++   G+ P+  T   ++ AC  L++ E+   VC    +LG      +V
Sbjct: 210 DLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV 269

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y K G+I +A   F +C + + V Y  ++  YV +        +  EM   G  
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ ++ + + A     D+  G+  H + ++ G L G  ++++NAI+++Y++CG++  A 
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNG-LEG-WDNISNAIIDMYMKCGKREAAC 387

Query: 234 K-------------------------------MFDEITEPDVVSWSERIAAACDGV---E 259
           K                               +FDE+ E D+VSW+  I A        E
Sbjct: 388 KVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEE 447

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A  LF++++      +  TM+ + S+ G    L   K +  +  K      + +G AL+ 
Sbjct: 448 AIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVD 507

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           M+ +CG  + A  +F  +  +D  +W + I   +  G    A+++F  MLE  + P+   
Sbjct: 508 MFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVV 567

Query: 380 MASILEAVSNSKSLKQAMQ----------VHSHIIKSGFLLD 411
             ++L A S+  S+ Q  Q          +  HI+  G ++D
Sbjct: 568 FVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVD 609



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 8/272 (2%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD--SMISCLITT---YGKCNALNE 430
           N  T  S  + + N K+LK+  Q+H  ++K G L     S ++ LI +    G   +L+ 
Sbjct: 21  NPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDY 80

Query: 431 SKRVLSEIDKKNA--VHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           ++    + D   A     N L      A    +A+ LY  +       +  TF  +L AC
Sbjct: 81  ARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSAC 140

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
           + +  L +G  +H   LK   + DIFV +++I  Y +CG ++  ++ F  +   ++  W 
Sbjct: 141 SKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWT 200

Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
           +++ GY+      E  +LF +M + GV+P+ +T + V+++C     +   +   S +S+L
Sbjct: 201 SLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISEL 260

Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
            G+         +VD+  + G +  A+   D+
Sbjct: 261 -GMELSTIMVNALVDMYMKCGDICAARQIFDE 291



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/395 (20%), Positives = 163/395 (41%), Gaps = 48/395 (12%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++ S + + G  L  I+   L+  + K  D   A +   +  N++++ YN ++S      
Sbjct: 252 KVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHE 311

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   L + D +  +G RPD  T  S + AC   G L   +  H   L+ G      + +
Sbjct: 312 WASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISN 371

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G+  +A   F    +   V + +++ G V +G+ + +  +F EM    LE 
Sbjct: 372 AIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEM----LER 427

Query: 178 NEFSLTAVLGASFDVK-----------------EGEQIHGFGV--KVGFLSG------VC 212
           +  S   ++GA   V                   G+++   G+    G+L        VC
Sbjct: 428 DLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVC 487

Query: 213 NH-----------LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE- 259
            +           L  A+++++ RCG    A+ +F  + + DV +W+  I   A +G   
Sbjct: 488 TYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTE 547

Query: 260 -AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNAL 317
            A  LF ++     + ++   + LL++      +  G+Q+     K  G    +     +
Sbjct: 548 GAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCM 607

Query: 318 ISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
           + + G+ G + +A  +   + I  + V W S++A 
Sbjct: 608 VDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 182/597 (30%), Positives = 300/597 (50%), Gaps = 73/597 (12%)

Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           DA  +   I +P V S+S  I A        ++ G+F  +  +    + + + NL     
Sbjct: 68  DADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCA 127

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV---- 343
                +AGKQI       G      +  +L  MY +CG++ DAR +FD +  KD V    
Sbjct: 128 ELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSA 187

Query: 344 -------------------------------SWNSMIAGYSENGFFNQALDMFCHMLEFS 372
                                          SWN +++G++ +G+  +A+ MF  M    
Sbjct: 188 LLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLG 247

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK-------- 424
             P+  T++S+L +V +S++L    Q+H ++IK G L D  +IS ++  YGK        
Sbjct: 248 FCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGII 307

Query: 425 -------------CNA----LNESKRVLSEID-----KKNAVHINALASVLVYASC---- 458
                        CNA    L+ +  V   ++     K+  + +N ++   + A C    
Sbjct: 308 KLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNG 367

Query: 459 -HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
              EALEL+R +  +  + N  T   +L AC  +  L  G++ H  A++     D+ V S
Sbjct: 368 KDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGS 427

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+IDMY KCG I+ ++  F  +   +L  WN++M GY+ HG   EV ++F  + +  +KP
Sbjct: 428 ALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP 487

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D I++ ++L++C   GL  E   Y + MS+ +G+ P+LEHY+C+V+LLGR G L+ A   
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           I ++P  PD+ +W +LL++C +  N+DL  +A  KL  L+P+N  TYVL+SN+YA+ GMW
Sbjct: 548 IKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMW 607

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
            +V  +R +M+   L K PG SWI V    +   A D SH Q  +I +++ ++ E M
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEM 664



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 224/518 (43%), Gaps = 82/518 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++K+G   D  +S  LI+ ++ +  F  A   L    +  + ++++LI  L +  
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               ++ +F R+   GL PD     +L K C  L   +  + +H V    G     ++  
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV---------------------- 155
                Y + G +  A   F    + D V  +A++CGY                       
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 156 ----WNG---EFDKS---KE---VFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIH 199
               WNG    F++S   KE   +F +M  LG   ++ ++++VL   G S ++  G QIH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI-------------------- 239
           G+ +K G L   C  + +A++++Y + G     +K+FDE                     
Sbjct: 276 GYVIKQGLLKDKC--VISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGL 333

Query: 240 ---------------TEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMIN 281
                           E +VVSW+  IA        +EA  LF++++    + N  T+ +
Sbjct: 334 VDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPS 393

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L + G    L  G+    F  +V  ++ V +G+ALI MY KCG++  ++ +F+ +  K+
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN 453

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            V WNS++ GYS +G   + + +F  ++   L P+  +  S+L A        +  +  +
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFN 513

Query: 402 HIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            + +  G        SC++   G+   L E+  ++ EI
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEI 551



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
           +  Q H+ I+KSG   D  + + LI +Y   N  N++  +L  I        ++L   L 
Sbjct: 33  KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
            A   ++++ ++  ++      +      + K CA ++  + GK IHC+A  +  D D F
Sbjct: 93  KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V+ ++  MY +CG + DA++ F ++    +   +A++ GYA+ GC  EV  + ++M K G
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           ++P+ +++  +L+    +G  +EA      M  L G  P
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHL-GFCP 250



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 105/473 (22%), Positives = 192/473 (40%), Gaps = 89/473 (18%)

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
           RIL++G Q   +           I   LI+ Y      NDA  I   +      S++S+I
Sbjct: 40  RILKSGAQNDGY-----------ISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLI 88

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
              ++   F+Q++ +F  M    LIP+ + + ++ +  +   + K   Q+H     SG  
Sbjct: 89  YALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLD 148

Query: 410 LD------------------------DSM-----ISC--LITTYGKCNALNESKRVLSEI 438
           +D                        D M     ++C  L+  Y +   L E  R+LSE+
Sbjct: 149 MDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEM 208

Query: 439 DK----KNAVHINALASVLVYASCHAEALELYRTI--WGSCREVNGSTFSIVLKACAAMT 492
           +K     N V  N + S    +  H EA+ +++ +   G C +    T S VL +     
Sbjct: 209 EKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPD--QVTVSSVLPSVGDSE 266

Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK-------ICRDSLA 545
           +L  G+ IH   +K    +D  V SA++DMY K G +    + F +       +C   + 
Sbjct: 267 NLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYIT 326

Query: 546 G----------------------------WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           G                            W +++ G AQ+G   E   LF +M   GVKP
Sbjct: 327 GLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           + +T  ++L +C +   +   R+       +H L+  +   + ++D+  + G ++ +++ 
Sbjct: 387 NRVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDDVHVGSALIDMYAKCGRIKMSQIV 445

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLS 688
            + MP   +   W SL++  +++G     + +        L+PD  S   LLS
Sbjct: 446 FNMMPT-KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 193/627 (30%), Positives = 328/627 (52%), Gaps = 24/627 (3%)

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +++S     YA  G I  A   F +      ++Y  ++  YV +G +  +  VF+ M S 
Sbjct: 50  HILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSE 109

Query: 174 GLEL--NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           G++   + ++   V  A+ ++K    G  IHG  ++  F  G+  ++ NA++ +Y+  G+
Sbjct: 110 GIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWF--GMDKYVQNALLAMYMNFGR 167

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-LRFNDFQINE------YTMIN 281
              A  +FD +   DV+SW+  I+    G    G   D L   D+ +NE       T+++
Sbjct: 168 VEMARNVFDVMKNRDVISWNTMIS----GYYRNGYMNDALMMFDWMVNEGVDPDHATIVS 223

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L   G  + L  G+ +     +    + + + NAL++MY KCG++++AR +F  +  +D
Sbjct: 224 MLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRD 283

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVH 400
            ++W  MI GY E+G    AL++ C +++F  + PN  T+AS++ A  ++  L     +H
Sbjct: 284 VITWTCMINGYIEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLH 342

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              I+     D  + + LI+ Y KC  ++   RV S   + +    +A+ +  V      
Sbjct: 343 GWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVR 402

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL+L++ +     E N +T + +L A A + DL Q   IHC   K  +   +   + ++
Sbjct: 403 DALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLV 462

Query: 521 DMYCKCGTIEDAKRAFRKICRD----SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            +Y KCGT+E A + F  I        +  W A++ GY  HG  H    +F +M + GV 
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+EIT+ + L +C H+GLV E  T  S M + +  + +  HY CIVDLLGR G L+ A  
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  +P  P + IW +LL+AC  + N+ LG +A +KL EL+P+N   YVLL+N+YA+ G 
Sbjct: 583 LITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           W D+ K+R  M+   L K+PG+S I +
Sbjct: 643 WKDMEKVRNMMENVGLRKKPGHSTIEI 669



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 216/452 (47%), Gaps = 18/452 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFC 60
           I+  ++++   +D  +   L++ +  F     A R +FD  +NRD+I++N +ISG  R  
Sbjct: 139 IHGRILRSWFGMDKYVQNALLAMYMNFGRVEMA-RNVFDVMKNRDVISWNTMISGYYRNG 197

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               AL +FD +  +G+ PD  T  S++  CG L+  E+   VH +  +     ++ + +
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKN 257

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G +  A   F      D + +T M+ GY+ +G+ + + E+   M+  G+  
Sbjct: 258 ALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRP 317

Query: 178 NEF---SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N     SL +  G +  + +G+ +HG+ ++    S +   +  +++++Y +C       +
Sbjct: 318 NAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDII--IETSLISMYAKCKHIDLCFR 375

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F   +      WS  IA         +A  LFK +R  D + N  T+ +LL +      
Sbjct: 376 VFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLAD 435

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL----IFKDSVSWNS 347
           LR    I  +  K GFM  +     L+ +Y KCG +  A  IF+ +      KD V W +
Sbjct: 436 LRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS- 406
           +I+GY  +G  + AL +F  M+   + PN  T  S L A S+S  +++ + + S +++  
Sbjct: 496 LISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHY 555

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
             L   +  +C++   G+   L+E+  +++ I
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 236/507 (46%), Gaps = 13/507 (2%)

Query: 165 EVFVEMRSLGLELNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           EVF+      L + ++ SL     A+  + + + +H   +  G +SG   H+ + +   Y
Sbjct: 3   EVFLRRAKNALSVKQYQSLLNHYAATQSISKTKALHCHVITGGRVSG---HILSTLSVTY 59

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQI--NEYT 278
             CG    A K+FDE+ +  ++S++  I     DG+  +A  +F  +     +   + YT
Sbjct: 60  ALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYT 119

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
              +  + G  + +  G  I     +  F     + NAL++MY   G+V  AR++FD + 
Sbjct: 120 YPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMK 179

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            +D +SWN+MI+GY  NG+ N AL MF  M+   + P+  T+ S+L    + K L+    
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRN 239

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           VH  + +        + + L+  Y KC  ++E++ V   +++++ +    + +  +    
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGD 299

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
              ALEL R +       N  T + ++ AC     L  GK +H  A++ +   DI +E++
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETS 359

Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           +I MY KC  I+   R F    R+    W+A++ G  Q+    +  +LF +M +  V+P+
Sbjct: 360 LISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPN 419

Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT- 637
             T  ++L +      +R+    + C     G +  L+    +V +  + G LE A    
Sbjct: 420 IATLNSLLPAYATLADLRQTMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478

Query: 638 --IDQMPIPPDAHIWQSLLSACTIYGN 662
             I +     D  +W +L+S   ++G+
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGD 505



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 249/544 (45%), Gaps = 28/544 (5%)

Query: 36  RFLFDTQNRD-IITYNALISGLARFCQSGPALKLFDRLRYQGLR--PDAFTFSSLVKACG 92
           R LFD   +  +++YN +I    R      A+ +F R+  +G++  PD +T+  + KA G
Sbjct: 69  RKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAG 128

Query: 93  SLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
            L+      ++HG  L+  F    Y+ +  +  Y   G +  A   F    + D +++  
Sbjct: 129 ELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNT 188

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVG 206
           M+ GY  NG  + +  +F  M + G++ +  ++ ++L   G    ++ G  +H    +  
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKR 248

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGL 263
               +   + NA++N+Y++CG+  +A  +F  +   DV++W+  I       D   A  L
Sbjct: 249 LGDKI--EVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALEL 306

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
            + ++F   + N  T+ +L+S+ G    L  GK +  +  +      + I  +LISMY K
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAK 366

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           C  ++    +F       +  W+++IAG  +N     ALD+F  M    + PN  T+ S+
Sbjct: 367 CKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSL 426

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L A +    L+Q M +H ++ K+GF+      + L+  Y KC  L  + ++ + I +K+ 
Sbjct: 427 LPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486

Query: 444 VHINALASVLVYA-SCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
                L   L+     H +   AL+++  +  S    N  TF+  L AC+    +E+G  
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546

Query: 500 IHCLALK-----ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMG 553
           +    L+     AR +      + ++D+  + G +++A      I  +  +  W A++  
Sbjct: 547 LFSFMLEHYKTLARSNH----YTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAA 602

Query: 554 YAQH 557
              H
Sbjct: 603 CVTH 606


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 172/490 (35%), Positives = 263/490 (53%), Gaps = 2/490 (0%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A   +  ++F   + N  T   L  +      +  G+       + G  E   + ++LI+
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY +CG++ DAR +FD +  KD VSWNSMI+GYS+     +A+ +F  M+E    PN  +
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           + S+L A      LK    V   ++++   L+  M S LI  YGKC  L  ++R+   + 
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           KK+ V  NA+ +         EA++L++ +  S    +  T   +L ACA++  L+ GK 
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +   A +  +  D++V +A++DMY KCG++++A R F  + + +   WNAM+   A HG 
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQ 410

Query: 560 YHEVSNLFNKMSKFG--VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
             E   LF  M   G  V P++IT++ VL++C HAGLV E R     MS   GL+P++EH
Sbjct: 411 AQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEH 470

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y+C+VDL  R G LE A   +  MP  PD  I  +LL AC    NID+       LLEL+
Sbjct: 471 YSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELE 530

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P N   YV+ S LYA+   W+D  ++R  MK+K + K PG SWI +    H F+AGD  H
Sbjct: 531 PSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH 590

Query: 738 SQSKEIYKEL 747
            +  EI++ L
Sbjct: 591 QEWIEIHQIL 600



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 237/465 (50%), Gaps = 24/465 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-F 59
           QI++ L+ N  H       + +       DF  A  F  +  +    ++N +I GL+  +
Sbjct: 50  QIHAQLLTNSIHK----PNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAW 105

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
            +S  AL+ + R+++ GL+P+  T+  L  AC +L   +   + H   ++ G     ++ 
Sbjct: 106 NKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS 165

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I  YA+ G++  A   F +    D V++ +M+ GY       ++  +F EM   G +
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNH-LNNAIMNLYVRCGQKLDA 232
            NE SL +VLGA     D+K G  +  F V+        N+ + +A++++Y +CG  + A
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM---TLNYFMGSALIHMYGKCGDLVSA 282

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD + + D V+W+  I   A +G+  EA  LF+D+R +    ++ T+I +LS+    
Sbjct: 283 RRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASI 342

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GKQ++ +  + GF + V +G AL+ MY KCG +++A  +F  +  K+ VSWN+MI
Sbjct: 343 GALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMI 402

Query: 350 AGYSENGFFNQALDMFCHMLE--FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +  + +G   +AL +F  M+    ++ PN  T   +L A  ++  + +  ++  H++ S 
Sbjct: 403 SALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLF-HMMSSS 461

Query: 408 FLLDDSM--ISCLITTYGKCNALNES-KRVLSEIDKKNAVHINAL 449
           F L   +   SC++  + +   L E+   V++  +K + V + AL
Sbjct: 462 FGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 166/526 (31%), Positives = 285/526 (54%), Gaps = 3/526 (0%)

Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A+ +F+ I +P+  +++  I   A       A  LFK +     Q +++T  ++L +   
Sbjct: 74  ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
            + LR G+Q+ A   K GF     + N LI MY  CGQ+  AR +FD +  +  V+WNSM
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSM 193

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++GY++NG +++ + +F  +LE  +  +  TM S+L A     +L+    +  +I+  G 
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             ++++ + LI  Y KC  ++ ++++  E+DK++ V  +A+ S    A    EAL L+  
Sbjct: 254 RRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHE 313

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       N  T   VL +CA +   E GK +H    K +    + + + +ID Y KCG 
Sbjct: 314 MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGY 373

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I+ +   F+++   ++  W A++ G A +G        F+ M +  VKP+++T++ VL++
Sbjct: 374 IDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C HA LV + R   + M     + P++EHY C+VD+LGR G LE A   ID MP PP+A 
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAV 493

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           +W++LL++C  + NI++   +   +  L+P +   Y+LLSN YA  G   D  ++R  +K
Sbjct: 494 VWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIK 553

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           EK + K PG S I + G  H F++ D  H  SKEI+  L K+ + +
Sbjct: 554 EKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQI 599



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 235/475 (49%), Gaps = 24/475 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISH----FTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
           Q+++ L+K    LDPI++  ++           D+  A          +   YN +I GL
Sbjct: 39  QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDY--ALSIFNHIDKPESSAYNVMIRGL 96

Query: 57  ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
           A       AL LF ++  + ++ D FTFSS++KAC    +L+E E VH + LK GF S  
Sbjct: 97  AFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNE 156

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           ++ +  I+ YA  G+I  A   F    +   VA+ +M+ GY  NG +D+  ++F ++  L
Sbjct: 157 FVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILEL 216

Query: 174 GLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            +E ++ ++ +VL   G   +++ GE I  + V  G      N L  +++++Y +CGQ  
Sbjct: 217 RIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRN--NTLTTSLIDMYAKCGQVD 274

Query: 231 DAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A K+FDE+ + DVV+WS  I   A A    EA  LF +++  +   NE TM+++L S  
Sbjct: 275 TARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCA 334

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
                  GK +  +  K      V++G  LI  Y KCG ++ +  +F  + FK+  +W +
Sbjct: 335 MLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTA 394

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +I G + NG    AL+ F  MLE  + PN  T   +L A S++  + Q   + +  ++  
Sbjct: 395 LIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNS-MRRD 453

Query: 408 FLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           F ++  +    C++   G+   L E+ + +  +        NA+    + ASC A
Sbjct: 454 FDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNM----PFPPNAVVWRTLLASCRA 504



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 148/267 (55%)

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           ++ A SIF+++   +S ++N MI G +     + AL +F  M E S+  + +T +S+L+A
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            S  K+L++  QVH+ I+KSGF  ++ + + LI  Y  C  +  ++ V   + +++ V  
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190

Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           N++ S         E ++L+R I     E +  T   VL AC  + +LE G+ I    + 
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
               ++  + +++IDMY KCG ++ A++ F ++ +  +  W+AM+ GYAQ     E  NL
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAG 593
           F++M K  V P+E+T ++VL SC   G
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLG 337



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 181/393 (46%), Gaps = 35/393 (8%)

Query: 374 IPNGYTMASILEAVSNSKSL--------KQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
           +PN  ++ SI +   N KSL        K   QVH+H++K+  LLD  +   ++ +    
Sbjct: 8   LPN-ISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALL 66

Query: 426 --NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
             + ++ +  + + IDK  +   N +   L +      AL L++ +     + +  TFS 
Sbjct: 67  LPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSS 126

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           VLKAC+ M  L +G+ +H L LK+ +  + FVE+ +I MY  CG I  A+  F  +   S
Sbjct: 127 VLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERS 186

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           +  WN+M+ GY ++G + EV  LF K+ +  ++ D++T ++VL +C     + E    + 
Sbjct: 187 IVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANL-EIGELIG 245

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
                 GL         ++D+  + G ++ A+   D+M    D   W +++S    Y   
Sbjct: 246 EYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG---YAQA 301

Query: 664 DLGLLAGSKLLELQPDN--ESTYVLLSNLYASA-------GMWNDVGKLRKEMKEKFLCK 714
           D    A +   E+Q  N   +   ++S LY+ A       G W      +K+MK      
Sbjct: 302 DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT---- 357

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
                 + +G     FYA      +S E++KE+
Sbjct: 358 ------VTLGTQLIDFYAKCGYIDRSVEVFKEM 384


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 192/642 (29%), Positives = 322/642 (50%), Gaps = 42/642 (6%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLG 174
           I  + ++G   SA   F       +V+Y AM+ GY+ N +F+ ++ +F +M      S  
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWN 115

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + L  +     LG +   FD+   + +  +               N++++ Y + G   +
Sbjct: 116 VMLTGYVRNCRLGDARRLFDLMPEKDVVSW---------------NSLLSGYAQNGYVDE 160

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD + E + +SW+  +AA        EA  LF+         +++ +I+    +GG
Sbjct: 161 AREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE-------SKSDWDLISWNCLMGG 213

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               +     +    K+   + +S  N +IS Y + G ++ AR +FD    +D  +W +M
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISW-NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++GY +NG  ++A   F  M E + +     +A  ++         + M +   + +S  
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT--------KKMDIARELFESMP 324

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             + S  + +IT YG+   + ++++    + +++ V   A+ +    +  + EAL ++  
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I      +N +TF   L  CA +  LE GK IH  A+K  Y    FV +A++ MY KCG+
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I++A   F  I    +  WN M+ GYA+HG   +   +F  M   GVKPDEIT + VL++
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GL+     Y   M+  +G+IP  +HY C++DLLGR G LE A+  I  MP  P A 
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAA 564

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W +LL A  I+GN +LG  A   + +++P N   YVLLSNLYA++G W D  K+R +M+
Sbjct: 565 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMR 624

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +  + K PGYSW+ V    H F  GD SH + + IY  L +L
Sbjct: 625 DIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 213/484 (44%), Gaps = 74/484 (15%)

Query: 19  TTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL 77
             +IS + + + F  A R LFD    RD+ ++N +++G  R C+ G A +LFD +  + +
Sbjct: 84  NAMISGYLRNSKFNLA-RNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDV 142

Query: 78  ---------------------------RPDAFTFSSLVKA---CGSLQEN---------- 97
                                        ++ +++ L+ A    G ++E           
Sbjct: 143 VSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDW 202

Query: 98  EIVHGVCLKLGFSSRVYL-----------------VSGFIENYAKSGEIVSAEMCFRDCL 140
           +++   CL  GF  +  L                  +  I  YA+ G +  A   F +  
Sbjct: 203 DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESP 262

Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHG 200
             D   +TAMV GYV NG  D++K  F EM     E NE S  A++      K+ +    
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARE 318

Query: 201 FGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG- 257
                 F S  C +++  N ++  Y + G    A K FD + + D VSW+  IA      
Sbjct: 319 L-----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSG 373

Query: 258 --VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              EA  +F +++ +   +N  T    LS+      L  GKQI     K+G+     +GN
Sbjct: 374 HYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN 433

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           AL++MY KCG +++A   F+ +  KD VSWN+M+AGY+ +GF  QAL +F  M    + P
Sbjct: 434 ALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKP 493

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRV 434
           +  TM  +L A S++  L +  +    + K  G +      +C+I   G+   L E++ +
Sbjct: 494 DEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDL 553

Query: 435 LSEI 438
           +  +
Sbjct: 554 IRNM 557



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/527 (22%), Positives = 235/527 (44%), Gaps = 26/527 (4%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           +F+T   R  ++YNA+ISG  R  +   A  LFD++  + L       +  V+ C  L +
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC-RLGD 129

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +  +  +    S   L+SG    YA++G +  A   F +  + +++++  ++  YV 
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSG----YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
           NG  +++  +F E +S   + +  S   ++G     K+         K+     +     
Sbjct: 186 NGRIEEACLLF-ESKS---DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS---W 238

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINE 276
           N +++ Y + G    A ++FDE    DV +W+    A   G    G+  + +    ++ E
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWT----AMVSGYVQNGMLDEAKTFFDEMPE 294

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
              ++  + + G  +      I    ++      +S  N +I+ YG+ G +  AR  FD 
Sbjct: 295 KNEVSYNAMIAG-YVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  +D VSW ++IAGY+++G + +AL+MF  + +     N  T    L   ++  +L+  
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q+H   +K G+     + + L+  Y KC +++E+      I++K+ V  N + +     
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +AL ++ ++  +  + +  T   VL AC+    L++G        K   D  +   
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK---DYGVIPT 530

Query: 517 SA----VIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           S     +ID+  + G +E+A+   R +  +   A W A++     HG
Sbjct: 531 SKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 173/382 (45%), Gaps = 23/382 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D I   T+IS + +     +A R   ++  RD+ T+ A++SG  +      A   FD + 
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM- 292

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF---IENYAKSGEIV 130
                P+    S      G +Q  ++   +  +L  S     +S +   I  Y + G+I 
Sbjct: 293 -----PEKNEVSYNAMIAGYVQTKKM--DIARELFESMPCRNISSWNTMITGYGQIGDIA 345

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F      D V++ A++ GY  +G ++++  +FVE++  G  LN  +    L    
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           D+     G+QIHG  VK+G+ +G    + NA++ +Y +CG   +A   F+ I E DVVSW
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGC--FVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCY 303
           +  +A       G +A  +F+ ++    + +E TM+ +LS+     +L  G +   +   
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSENGFFNQAL 362
             G +        +I + G+ G++ +A+ +   + F+  + SW +++     +G  N  L
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG--NTEL 581

Query: 363 DMFCHMLEFSLIPNGYTMASIL 384
                 + F + P    M  +L
Sbjct: 582 GEKAAEMVFKMEPQNSGMYVLL 603



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 159/369 (43%), Gaps = 31/369 (8%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  IS + + G  + A  +F+ +  + SVS+N+MI+GY  N  FN A ++F  M E  L 
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL- 111

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
              ++   +L     +  L  A ++   + +   +  +S    L++ Y +   ++E++ V
Sbjct: 112 ---FSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS----LLSGYAQNGYVDEAREV 164

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              + +KN++  N L +  V+     EA  L+ +          S + ++   C     +
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES---------KSDWDLISWNCLMGGFV 215

Query: 495 EQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            + K      L  +   +D    + +I  Y + G +  A+R F +     +  W AM+ G
Sbjct: 216 RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSG 275

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y Q+G   E    F++M     + +E++Y A++        +  AR     M        
Sbjct: 276 YVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMP-----CR 326

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            +  +  ++   G++G +  A+   D MP   D   W ++++     G+ +  L   +  
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYEEAL---NMF 382

Query: 674 LELQPDNES 682
           +E++ D ES
Sbjct: 383 VEIKQDGES 391



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/371 (20%), Positives = 165/371 (44%), Gaps = 33/371 (8%)

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D + WN  I+ +  NG  + AL +F  M   S +     ++  L    NSK    A  + 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLR---NSK-FNLARNLF 103

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             + +          + ++T Y +   L +++R+   + +K+ V  N+L S         
Sbjct: 104 DQMPERDLF----SWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVD 159

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EA E++  +     E N  +++ +L A      +E+     CL  +++ D D+   + ++
Sbjct: 160 EAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEA----CLLFESKSDWDLISWNCLM 211

Query: 521 DMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
             + +   + DA+  F K+  RD+++ WN M+ GYAQ G   +   LF++        D 
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGGGLSQARRLFDE----SPTRDV 266

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+ A+++     G++ EA+T+   M + +    ++ + A I   + +   ++ A+   +
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMIAGYV-QTKKMDIARELFE 321

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYASAGMWN 698
            MP   +   W ++++    YG I   +    K  ++ P  +  ++  +   YA +G + 
Sbjct: 322 SMPC-RNISSWNTMITG---YGQIG-DIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE 376

Query: 699 DVGKLRKEMKE 709
           +   +  E+K+
Sbjct: 377 EALNMFVEIKQ 387



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 59/255 (23%)

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D DI   +  I  + + G  + A   F  + R S   +NAM+ GY ++  ++   NLF++
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 570 MSK-------------------------FGVKP--DEITYLAVLTSCCHAGLVREARTYL 602
           M +                         F + P  D +++ ++L+     G V EAR   
Sbjct: 106 MPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF 165

Query: 603 SCMSD-----LHGLIPQLEH---------------------YACIVDLLGRVGLLEGAKM 636
             M +      +GL+    H                     + C++    R   L  A+ 
Sbjct: 166 DNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARW 225

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYASAG 695
             D+MP+  DA  W +++S     G    GL    +L +  P  +  T+  + + Y   G
Sbjct: 226 LFDKMPV-RDAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNG 280

Query: 696 MWNDVGKLRKEMKEK 710
           M ++      EM EK
Sbjct: 281 MLDEAKTFFDEMPEK 295



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   +K G+     +   L++ + K      A       + +D++++N +++G AR  
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL +F+ ++  G++PD  T   ++ AC
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSAC 505


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 192/642 (29%), Positives = 322/642 (50%), Gaps = 42/642 (6%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLG 174
           I  + ++G   SA   F       +V+Y AM+ GY+ N +F+ ++ +F +M      S  
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWN 115

Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
           + L  +     LG +   FD+   + +  +               N++++ Y + G   +
Sbjct: 116 VMLTGYVRNCRLGDARRLFDLMPEKDVVSW---------------NSLLSGYAQNGYVDE 160

Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD + E + +SW+  +AA        EA  LF+         +++ +I+    +GG
Sbjct: 161 AREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE-------SKSDWDLISWNCLMGG 213

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               +     +    K+   + +S  N +IS Y + G ++ AR +FD    +D  +W +M
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISW-NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           ++GY +NG  ++A   F  M E + +     +A  ++         + M +   + +S  
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT--------KKMDIARELFESMP 324

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             + S  + +IT YG+   + ++++    + +++ V   A+ +    +  + EAL ++  
Sbjct: 325 CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           I      +N +TF   L  CA +  LE GK IH  A+K  Y    FV +A++ MY KCG+
Sbjct: 385 IKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I++A   F  I    +  WN M+ GYA+HG   +   +F  M   GVKPDEIT + VL++
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H GL+     Y   M+  +G+IP  +HY C++DLLGR G LE A+  I  MP  P A 
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAA 564

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
            W +LL A  I+GN +LG  A   + +++P N   YVLLSNLYA++G W D  K+R +M+
Sbjct: 565 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMR 624

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           +  + K PGYSW+ V    H F  GD SH + + IY  L +L
Sbjct: 625 DIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 213/482 (44%), Gaps = 74/482 (15%)

Query: 21  LISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGL-- 77
           +IS + + + F  A R LFD    RD+ ++N +++G  R C+ G A +LFD +  + +  
Sbjct: 86  MISGYLRNSKFNLA-RNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS 144

Query: 78  -------------------------RPDAFTFSSLVKA---CGSLQEN----------EI 99
                                      ++ +++ L+ A    G ++E           ++
Sbjct: 145 WNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDL 204

Query: 100 VHGVCLKLGFSSRVYL-----------------VSGFIENYAKSGEIVSAEMCFRDCLDL 142
           +   CL  GF  +  L                  +  I  YA+ G +  A   F +    
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR 264

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFG 202
           D   +TAMV GYV NG  D++K  F EM     E NE S  A++      K+ +      
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIAREL- 319

Query: 203 VKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG--- 257
               F S  C +++  N ++  Y + G    A K FD + + D VSW+  IA        
Sbjct: 320 ----FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375

Query: 258 VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
            EA  +F +++ +   +N  T    LS+      L  GKQI     K+G+     +GNAL
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           ++MY KCG +++A   F+ +  KD VSWN+M+AGY+ +GF  QAL +F  M    + P+ 
Sbjct: 436 LAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDE 495

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLS 436
            TM  +L A S++  L +  +    + K  G +      +C+I   G+   L E++ ++ 
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555

Query: 437 EI 438
            +
Sbjct: 556 NM 557



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/527 (22%), Positives = 235/527 (44%), Gaps = 26/527 (4%)

Query: 38  LFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
           +F+T   R  ++YNA+ISG  R  +   A  LFD++  + L       +  V+ C  L +
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC-RLGD 129

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVW 156
              +  +  +    S   L+SG    YA++G +  A   F +  + +++++  ++  YV 
Sbjct: 130 ARRLFDLMPEKDVVSWNSLLSG----YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN 216
           NG  +++  +F E +S   + +  S   ++G     K+         K+     +     
Sbjct: 186 NGRIEEACLLF-ESKS---DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS---W 238

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINE 276
           N +++ Y + G    A ++FDE    DV +W+    A   G    G+  + +    ++ E
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWT----AMVSGYVQNGMLDEAKTFFDEMPE 294

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
              ++  + + G  +      I    ++      +S  N +I+ YG+ G +  AR  FD 
Sbjct: 295 KNEVSYNAMIAG-YVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  +D VSW ++IAGY+++G + +AL+MF  + +     N  T    L   ++  +L+  
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
            Q+H   +K G+     + + L+  Y KC +++E+      I++K+ V  N + +     
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               +AL ++ ++  +  + +  T   VL AC+    L++G        K   D  +   
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK---DYGVIPT 530

Query: 517 SA----VIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           S     +ID+  + G +E+A+   R +  +   A W A++     HG
Sbjct: 531 SKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 173/382 (45%), Gaps = 23/382 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D I   T+IS + +     +A R   ++  RD+ T+ A++SG  +      A   FD + 
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM- 292

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGF---IENYAKSGEIV 130
                P+    S      G +Q  ++   +  +L  S     +S +   I  Y + G+I 
Sbjct: 293 -----PEKNEVSYNAMIAGYVQTKKM--DIARELFESMPCRNISSWNTMITGYGQIGDIA 345

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F      D V++ A++ GY  +G ++++  +FVE++  G  LN  +    L    
Sbjct: 346 QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           D+     G+QIHG  VK+G+ +G    + NA++ +Y +CG   +A   F+ I E DVVSW
Sbjct: 406 DIAALELGKQIHGQAVKMGYGTGC--FVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463

Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCY 303
           +  +A       G +A  +F+ ++    + +E TM+ +LS+     +L  G +   +   
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSENGFFNQAL 362
             G +        +I + G+ G++ +A+ +   + F+  + SW +++     +G  N  L
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHG--NTEL 581

Query: 363 DMFCHMLEFSLIPNGYTMASIL 384
                 + F + P    M  +L
Sbjct: 582 GEKAAEMVFKMEPQNSGMYVLL 603



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 159/369 (43%), Gaps = 31/369 (8%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N  IS + + G  + A  +F+ +  + SVS+N+MI+GY  N  FN A ++F  M E  L 
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL- 111

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
              ++   +L     +  L  A ++   + +   +  +S++S     Y +   ++E++ V
Sbjct: 112 ---FSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLS----GYAQNGYVDEAREV 164

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
              + +KN++  N L +  V+     EA  L+ +          S + ++   C     +
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES---------KSDWDLISWNCLMGGFV 215

Query: 495 EQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
            + K      L  +   +D    + +I  Y + G +  A+R F +     +  W AM+ G
Sbjct: 216 RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSG 275

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           Y Q+G   E    F++M     + +E++Y A++        +  AR     M        
Sbjct: 276 YVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMP-----CR 326

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
            +  +  ++   G++G +  A+   D MP   D   W ++++     G+ +  L   +  
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAGYAQSGHYEEAL---NMF 382

Query: 674 LELQPDNES 682
           +E++ D ES
Sbjct: 383 VEIKQDGES 391



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/371 (20%), Positives = 165/371 (44%), Gaps = 33/371 (8%)

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           D + WN  I+ +  NG  + AL +F  M   S +     ++  L    NSK    A  + 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLR---NSK-FNLARNLF 103

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             + +          + ++T Y +   L +++R+   + +K+ V  N+L S         
Sbjct: 104 DQMPERDLF----SWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVD 159

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EA E++  +     E N  +++ +L A      +E+     CL  +++ D D+   + ++
Sbjct: 160 EAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEA----CLLFESKSDWDLISWNCLM 211

Query: 521 DMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
             + +   + DA+  F K+  RD+++ WN M+ GYAQ G   +   LF++        D 
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGGGLSQARRLFDESP----TRDV 266

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+ A+++     G++ EA+T+   M + +    ++ + A I   + +   ++ A+   +
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMIAGYV-QTKKMDIARELFE 321

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE-STYVLLSNLYASAGMWN 698
            MP   +   W ++++    YG I   +    K  ++ P  +  ++  +   YA +G + 
Sbjct: 322 SMPC-RNISSWNTMITG---YGQIG-DIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE 376

Query: 699 DVGKLRKEMKE 709
           +   +  E+K+
Sbjct: 377 EALNMFVEIKQ 387



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 38/143 (26%)

Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
           + GL+     Y   M++ + + P  +HY C++DLLGRV  LE                  
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 651 QSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
            +LL A  I+GN +LG  A     ++ P N                         +M++ 
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857

Query: 711 FLCKEPGYSWIHVGGYTHHFYAG 733
            + K PGYSW  V    H F  G
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG 880



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 59/255 (23%)

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
           D DI   +  I  + + G  + A   F  + R S   +NAM+ GY ++  ++   NLF++
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105

Query: 570 MSK-------------------------FGVKP--DEITYLAVLTSCCHAGLVREARTYL 602
           M +                         F + P  D +++ ++L+     G V EAR   
Sbjct: 106 MPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF 165

Query: 603 SCMSD-----LHGLIPQLEH---------------------YACIVDLLGRVGLLEGAKM 636
             M +      +GL+    H                     + C++    R   L  A+ 
Sbjct: 166 DNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARW 225

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNES-TYVLLSNLYASAG 695
             D+MP+  DA  W +++S     G    GL    +L +  P  +  T+  + + Y   G
Sbjct: 226 LFDKMPV-RDAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNG 280

Query: 696 MWNDVGKLRKEMKEK 710
           M ++      EM EK
Sbjct: 281 MLDEAKTFFDEMPEK 295



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/91 (23%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+   +K G+     +   L++ + K      A       + +D++++N +++G AR  
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL +F+ ++  G++PD  T   ++ AC
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSAC 505


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 222/777 (28%), Positives = 364/777 (46%), Gaps = 77/777 (9%)

Query: 50  NALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLK 106
           +AL S  AR   +G A  L  RL   GL    F  ++L+ A   CG+L +   +    L+
Sbjct: 30  DALRSCGARSALTG-ARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNL----LR 84

Query: 107 LGFSSRVYLVSGFIEN-YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
              +    +    + N YAK G +  A   F      D  ++  ++ GY  +G+F  + +
Sbjct: 85  DEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALD 144

Query: 166 VFVEMRSLGLEL-NEFSLTAVLGASFDVKEGE-QIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           +FV MR  G  L N F+   V+ +   +   E  +   G+   F S     +  A++++ 
Sbjct: 145 IFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDML 204

Query: 224 VRCGQKLDAVKMFDEITEP-------------------------------DVVSWSERIA 252
           VRCG    A K F  I  P                               DVVSW+  I+
Sbjct: 205 VRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVIS 264

Query: 253 AACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
           A        EA  +  D+     + +  T  + L++      L  GKQ+     +     
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHI 324

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
              + +A++ +Y KCG   +A+ +F  L  ++SVSW  +I G+ + G F++++++F  M 
Sbjct: 325 DPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMR 384

Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG----FLLDDSMISC-------- 417
              +  + + +A+++    N+  +    Q+HS  +KSG     ++ +S+IS         
Sbjct: 385 AELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQ 444

Query: 418 -------------------LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
                              +IT Y +   + +++    ++  +N +  NA+    +    
Sbjct: 445 NAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGA 504

Query: 459 HAEALELYRTIWGSCREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
             + L++Y  +      + +  T+  + + CA +   + G  I    +K     D  V +
Sbjct: 505 EEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVN 564

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           AVI MY KCG I +A++AF  + R  L  WNAM+ GY+QHG   +   +F+ +   G KP
Sbjct: 565 AVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKP 624

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D I+Y+AVL+ C H+GLV E + Y   M   H + P LEH++C+VDLLGR G L  AK  
Sbjct: 625 DYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNL 684

Query: 638 IDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           ID+MP+ P A +W +LLSAC  +GN DL  LA   L +L       Y+LL+ +YA AG  
Sbjct: 685 IDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKS 744

Query: 698 NDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +D  ++RK M++K + K PGYSW+ V    H F A D SH Q   I ++L +L E +
Sbjct: 745 DDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKI 801



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 230/480 (47%), Gaps = 58/480 (12%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           I   +++  + K      A         RD++++N +IS L++  +   AL +   +  +
Sbjct: 226 ICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGK 285

Query: 76  GLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G+RPD+ T++S + AC    SL+  + +H   ++       Y+ S  +E YAK G    A
Sbjct: 286 GVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEA 345

Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---S 189
           +  F    D ++V++T ++ G++  G F +S E+F +MR+  + +++F+L  ++     +
Sbjct: 346 KRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNT 405

Query: 190 FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
            D+  G Q+H   +K G    V   ++N+++++Y +CG   +A  +F+ + E D+VSW+ 
Sbjct: 406 MDICLGSQLHSLCLKSGHTRAVV--VSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTG 463

Query: 250 RIAAACD--------------------------------GVEAFGL--FKDLRFNDFQIN 275
            I A                                   G E  GL  + D+      I 
Sbjct: 464 MITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIP 523

Query: 276 EY----TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           ++    T+    + +G  ++   G QI     KVG +   S+ NA+I+MY KCG++++AR
Sbjct: 524 DWVTYVTLFRGCADIGANKL---GDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEAR 580

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
             FD+L  KD VSWN+MI GYS++G   QA+++F  +L     P+  +  ++L   S+S 
Sbjct: 581 KAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSG 640

Query: 392 SLKQA-----MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            +++      M    H I  G        SC++   G+   L E+K ++ E+  K    +
Sbjct: 641 LVEEGKFYFDMMKRDHNISPGL----EHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEV 696



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 143/628 (22%), Positives = 276/628 (43%), Gaps = 87/628 (13%)

Query: 14  DPILSTTLISH------FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALK 67
           D I    +I+H      + K      A         RD+ ++N ++SG  +  Q   AL 
Sbjct: 85  DEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALD 144

Query: 68  LFDRLRYQGLR-PDAFTFSSLVKACGSLQENEIVHGV----------------------- 103
           +F  +R  G   P+AFTF  ++K+CG+L  +E+   +                       
Sbjct: 145 IFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDML 204

Query: 104 --CLKLGFSSR---------VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
             C  + F+S+         +   +  +  YAKS  +  A   F+   + D V++  ++ 
Sbjct: 205 VRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVIS 264

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLS 209
               +G   ++ ++ V+M   G+  +  + T+ L A   +     G+Q+H   ++   L 
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIR--NLP 322

Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFK 265
            +  ++ +A++ LY +CG   +A ++F  + + + VSW+  I       C   E+  LF 
Sbjct: 323 HIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFS-ESVELFN 381

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
            +R     ++++ +  L+S       +  G Q+ + C K G    V + N+LISMY KCG
Sbjct: 382 QMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCG 441

Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENG-------FFN------------------- 359
            + +A  IF+++  +D VSW  MI  YS+ G       FF+                   
Sbjct: 442 NLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQ 501

Query: 360 -----QALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
                  L M+  ML E  +IP+  T  ++    ++  + K   Q+  H +K G +LD S
Sbjct: 502 HGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTS 561

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
           +++ +IT Y KC  ++E+++    + +K+ V  NA+ +         +A+E++  I    
Sbjct: 562 VVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKG 621

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIED 531
            + +  ++  VL  C+    +E+GK  +   +K  ++    +E  S ++D+  + G + +
Sbjct: 622 AKPDYISYVAVLSGCSHSGLVEEGK-FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIE 680

Query: 532 AKRAFRKICRDSLAG-WNAMMMGYAQHG 558
           AK    ++     A  W A++     HG
Sbjct: 681 AKNLIDEMPMKPTAEVWGALLSACKTHG 708



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 188/409 (45%), Gaps = 65/409 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  +I+N  H+DP +++ ++  + K   F+ A R     ++R+ +++  LI G  ++ 
Sbjct: 312 QLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYG 371

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               +++LF+++R + +  D F  ++L+  C +  +      +H +CLK G +  V + +
Sbjct: 372 CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN 431

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAK G + +AE+ F    + D V++T M+  Y   G   K++E F +M +     
Sbjct: 432 SLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMST----R 487

Query: 178 NEFSLTAVLGASF-------------------DV--------------------KEGEQI 198
           N  +  A+LGA                     DV                    K G+QI
Sbjct: 488 NVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQI 547

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
            G  VKVG +  +   + NA++ +Y +CG+  +A K FD ++  D+VSW+  I       
Sbjct: 548 IGHTVKVGLI--LDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHG 605

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV---VS 312
            G +A  +F D+     + +  + + +LS      ++  GK      +    M+    +S
Sbjct: 606 MGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGK------FYFDMMKRDHNIS 659

Query: 313 IG----NALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENG 356
            G    + ++ + G+ G + +A+++ D +  K +   W ++++    +G
Sbjct: 660 PGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHG 708


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 207/689 (30%), Positives = 342/689 (49%), Gaps = 18/689 (2%)

Query: 80  DAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           D+  ++ LV+     GS    ++ H   +K  F+  ++L++ F+  Y+K GE+ +A+  F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
               +   ++Y  ++ GY   G + K+  +F E R   L+L++FS   VL A   +K+  
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127

Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+ IHG  +  G    V   L N ++++Y +C +   A  +F+   E D VSW+  I  
Sbjct: 128 LGKVIHGLAIVCGLGQQV--FLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITG 185

Query: 254 -ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSS--VGGERILRAGKQIQAFCYKVGFM 308
            A  G   E   L   +     ++N +T+ + L S  +    ++  GK +  +  K G  
Sbjct: 186 YARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLD 245

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN-----QALD 363
             + +G AL+ MY K G + DA  +F     ++ V +N+MIAG+ +    +     +AL 
Sbjct: 246 LDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALK 305

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           +F  M    + P+ +T +SI++  ++ ++ +   Q+H+HI K     D+ + S LI  Y 
Sbjct: 306 LFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYS 365

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
              +  +  +  +   K + V    + +          AL L+  +  S ++ +    + 
Sbjct: 366 LLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITT 425

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           +L ACA +     G+ +H  A+K        V+++ I MY K G ++ AK  F +I    
Sbjct: 426 MLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPD 485

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           +  W+ M+   AQHG   +  NLF  M  +G+ P++IT+L VLT+C H GLV E   Y  
Sbjct: 486 VVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYE 545

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNI 663
            M   + +   ++H  CIVDLL R G L  AK  I          +W++LLS C IY +I
Sbjct: 546 SMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDI 605

Query: 664 DLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
             G     KL+EL P   S+YVLL N+Y  AG+     K+R+ MK++ + KEPG SWI V
Sbjct: 606 VTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEV 665

Query: 724 GGYTHHFYAGDSSHSQSKEIYKELIKLYE 752
           G   H F  GD SH  S+ IYK+L  + E
Sbjct: 666 GNEVHSFVVGDISHPMSQIIYKKLEGMLE 694



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 249/527 (47%), Gaps = 21/527 (3%)

Query: 25  FTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTF 84
           ++K+ +   A +       R +I+YN LISG         A+ LF   R   L+ D F++
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 85  SSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
           + ++ ACG +++    +++HG+ +  G   +V+L +  I+ Y K   I  A + F    +
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF-----DVKEGE 196
           LDNV++ +++ GY   G +++  ++ V+M   GL LN F+L + L + +      V  G+
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
            +HG+ VK G    +   +  A++++Y + G   DA+++F      +VV ++  IA    
Sbjct: 234 TLHGYTVKQGLDLDIV--VGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291

Query: 257 --------GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                     EA  LF  ++    + +++T  +++           GKQI A   K    
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               IG+ LI +Y   G   D    F+     D VSW +MIAGY++NG F  AL +F  +
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYEL 411

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L     P+ + + ++L A ++  + +   QVH + +K+G      + +  I+ Y K   L
Sbjct: 412 LASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNL 471

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
           + +K    EI   + V  + +           +A+ L+  +       N  TF  VL AC
Sbjct: 472 DSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTAC 531

Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAK 533
           +    +E+G   +  ++K  YD  I V+  + ++D+  + G + DAK
Sbjct: 532 SHGGLVEEGLRYY-ESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAK 577



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 209/428 (48%), Gaps = 34/428 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARFC 60
           I+ L I  G      L+  LI  + K      A R LF++ +  D +++N+LI+G AR  
Sbjct: 132 IHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHA-RLLFESSDELDNVSWNSLITGYARVG 190

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-----GSLQENEIVHGVCLKLGFSSRVYL 115
                LKL  ++ + GLR +AFT  S +K+C       +   + +HG  +K G    + +
Sbjct: 191 AYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVV 250

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK-----SKEVFVEM 170
            +  ++ YAK+G +  A   FR   + + V Y AM+ G++   + DK     + ++F +M
Sbjct: 251 GTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQM 310

Query: 171 RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH-------LNNAIM 220
           +  G++ ++F+ ++++     ++    G+QIH           +C H       + + ++
Sbjct: 311 QRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAH---------ICKHNIQSDEFIGSTLI 361

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEY 277
            LY   G   D +K F+   + D+VSW+  IA      +   A  LF +L  +  + +E+
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            +  +LS+       R+G+Q+  +  K G   +  + N+ ISMY K G ++ A+  F+ +
Sbjct: 422 IITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEI 481

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
              D VSW+ MI   +++G    A+++F  M  + + PN  T   +L A S+   +++ +
Sbjct: 482 KNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGL 541

Query: 398 QVHSHIIK 405
           + +  + K
Sbjct: 542 RYYESMKK 549



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 17/243 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K+    D  + +TLI  ++         +    T   DI+++  +I+G A+  
Sbjct: 340 QIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNG 399

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
           Q   AL LF  L   G +PD F  ++++ AC  +   +  E VHG  +K G  +   + +
Sbjct: 400 QFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQN 459

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAKSG + SA++ F +  + D V+++ M+C    +G    +  +F  M+S G+  
Sbjct: 460 SQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHP 519

Query: 178 NEFSLTAVLGASFD---VKEGEQIH-----GFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           N+ +   VL A      V+EG + +      + +K+      C      I++L  R G+ 
Sbjct: 520 NQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTC------IVDLLSRAGRL 573

Query: 230 LDA 232
           LDA
Sbjct: 574 LDA 576


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 200/692 (28%), Positives = 350/692 (50%), Gaps = 28/692 (4%)

Query: 80  DAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK--SGEIVSAEMCFR 137
           DAF    L ++C SL +   VHG   +   S  ++L +  +  Y +  +G+   A     
Sbjct: 13  DAFYLHHL-RSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLD 71

Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVL---GASFDVK 193
           +    + V++  ++  Y   G+ ++S E F+   R+  ++ + F+  A L     +  +K
Sbjct: 72  EMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLK 131

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE---- 249
           EG+ +H   V  G   GV   ++N+++++Y RCG   +A ++FD   E D VSW+     
Sbjct: 132 EGKVVHALAVLEGLAEGV--FVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSG 189

Query: 250 --RIAAACDGVEAFGLFKD--LRFNDFQINEYTMINLLSSVGGERILRA-GKQIQAFCYK 304
             R+ A  + +  F L +   +  N F +   ++I   S  GG+  +R   + +     K
Sbjct: 190 YLRVGAHEEMLRVFALMRRCAMGLNSFALG--SVIKCCS--GGDGSVRGIAEAVHGCVVK 245

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG------FF 358
            G    + + +A++ MY K G +++A ++F  ++  + V +N+MIAG   +         
Sbjct: 246 AGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVV 305

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            +AL ++  +    + P  +T +S++ A + +  ++   Q+H  ++K  F  DD + S L
Sbjct: 306 REALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSAL 365

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           I  Y     + +  R    + K++ V   A+ S  V       AL L+  + G   + + 
Sbjct: 366 IDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDP 425

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
            T S V+ ACA++  +  G+ + C A K+ +D+   + ++ I MY + G +E A + F++
Sbjct: 426 FTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQE 485

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           +    +  W+A++  +AQHGC  +    FN+M    V P+EIT+L VLT+C H GLV E 
Sbjct: 486 MESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEG 545

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             Y   M   +GL P ++H  C+VDLLGR G L  A+  I       +  +WQSLL +C 
Sbjct: 546 LRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCR 605

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I+ +++ G L   +++ELQP +   YV L N+Y  AG  +   K+R  MKE+ + KEPG 
Sbjct: 606 IHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGL 665

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
           SWI +    H F AGD SH +   IY +L ++
Sbjct: 666 SWIELRSGIHSFVAGDKSHPECNAIYTKLAEM 697



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 230/451 (50%), Gaps = 24/451 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++L +  G      +S +L+S + +  D   A R    T+ RD +++N+L+SG  R   
Sbjct: 136 VHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGA 195

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQE-NEIVHGVCLKLGFSSRVYLV 116
               L++F  +R   +  ++F   S++K C    GS++   E VHG  +K G  + ++L 
Sbjct: 196 HEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLA 255

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV-------FVE 169
           S  ++ YAK G +  A   F+  LD + V + AM+ G   + E    KEV       + E
Sbjct: 256 SAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRD-EAAVHKEVVREALSLYSE 314

Query: 170 MRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC 226
           ++S G+E  EF+ ++V+ A   + D++ G+QIHG  +K  F     + + +A+++LY   
Sbjct: 315 LQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGD--DFIGSALIDLYFNS 372

Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLL 283
               D  + F  + + DVV+W+  I+          A  LF +L     + + +T+ +++
Sbjct: 373 ACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVM 432

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
           ++     ++R G+Q+Q F  K GF    ++GN+ I MY + G V  A   F  +   D V
Sbjct: 433 NACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVV 492

Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           SW+++I+ ++++G   QAL  F  M+   ++PN  T   +L A S+   + + ++ +  I
Sbjct: 493 SWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYE-I 551

Query: 404 IKSGFLLDDSM--ISCLITTYGKCNALNESK 432
           +K  + L  ++   +C++   G+   L +++
Sbjct: 552 MKMEYGLCPTVKHCTCVVDLLGRAGRLADAE 582



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 12/256 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+  ++K+    D  + + LI  +   A     FR       +D++T+ A+ISG  +  
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNE 404

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVS 117
               AL LF  L   GL+PD FT SS++ AC SL   +  E +     K GF     + +
Sbjct: 405 LFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGN 464

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YA+SG + +A   F++    D V+++A++  +  +G   ++ + F EM    +  
Sbjct: 465 SCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVP 524

Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDA 232
           NE +   VL A      V EG + +   +K+ +  G+C  + +   +++L  R G+  DA
Sbjct: 525 NEITFLGVLTACSHGGLVDEGLRYYEI-MKMEY--GLCPTVKHCTCVVDLLGRAGRLADA 581

Query: 233 VKMF-DEITEPDVVSW 247
                D I   + V W
Sbjct: 582 EAFIRDSIFHDEPVVW 597


>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
 gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 188/618 (30%), Positives = 318/618 (51%), Gaps = 14/618 (2%)

Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS---LTAVLGASFDVKEGEQIHGFGV 203
           + + + G V  G   K+  +F +++  GL+ N F+   L+        +   + IH   V
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-----ACDGV 258
           K  F S +  ++  A++++YV+CG+  DA  +FD++   ++ SW+  I       + D V
Sbjct: 80  KSPFYSDI--YVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRV 137

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
             F LF  +R    + +  T+I L  +V   + LR  K + A   + G     S+ N  I
Sbjct: 138 --FNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWI 195

Query: 319 SMYGKCGQVNDARSIFDYL--IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           + Y KCG++  A+ +F  +    + SVSWNS+IA Y+  G +  A+  +  +L     P+
Sbjct: 196 AAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPD 255

Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLS 436
             T+ S+L +    ++L     +H H  + G   D S+I+ LI+ Y +C  ++ +  +  
Sbjct: 256 ASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFD 315

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
            +  +  V   A+ S         +AL L+  +  +  + +  T   ++  C     L  
Sbjct: 316 GMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGL 375

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           G  I   A      +D+ V +A+IDMY KCG++ DA+  F  +   ++  W AM+   A 
Sbjct: 376 GHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACAL 435

Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
           +G + E  +LF+ +S+ G++P+ IT+LAVL +CCH G + + R     M++ +G+ P L+
Sbjct: 436 NGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLD 495

Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
           HY+C++DLLGR G L  A   I  MP+ PD  IW +LL AC I+ N+++G      L EL
Sbjct: 496 HYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFEL 555

Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
           QP    ++V ++N+YAS G W++V  +RK M+   + K PG S + V G +H F+  D S
Sbjct: 556 QPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRS 615

Query: 737 HSQSKEIYKELIKLYEHM 754
           H  S  IY+ L  L   M
Sbjct: 616 HHDSLLIYEALGNLAMQM 633



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 248/518 (47%), Gaps = 19/518 (3%)

Query: 49  YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCL 105
           +N+ I G      +  AL LF +L+  GL+P+ FTF  L KAC  L     ++I+H   +
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSK 164
           K  F S +Y+ +  ++ Y K G++  A   F D + + N+A + AM+ G+   G  D+  
Sbjct: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLF-DKMPVRNIASWNAMIIGFSQIGSLDRVF 138

Query: 165 EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMN 221
            +F+ MR +G   +  ++  +  A    K     + +H  G++ G  +     ++N  + 
Sbjct: 139 NLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTS--VSNTWIA 196

Query: 222 LYVRCGQKLDAVKMFDEI--TEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINE 276
            Y +CG+   A  +F  I  T    VSW+  IA        V+A   +K L  + F+ + 
Sbjct: 197 AYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDA 256

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
            T+I+LLSS      L  G  I    +++G    +S+ N LISMY +CG ++ A  +FD 
Sbjct: 257 STIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDG 316

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +  +  VSW +MI+GYSE G  + AL +F  M E    P+  T+ S++     + +L   
Sbjct: 317 MSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLG 376

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             + ++        D  + + LI  Y KC +LN+++ +   +  +  V   A+ +     
Sbjct: 377 HWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALN 436

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EAL+L+  +  S  E N  TF  VL+AC     LE+G+    + +  RY  +  ++
Sbjct: 437 GEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECF-MMMTERYGINPGLD 495

Query: 517 --SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMM 551
             S +ID+  + G + +A    + +      G W A++
Sbjct: 496 HYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALL 533



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 217/456 (47%), Gaps = 22/456 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I++ ++K+  + D  + T ++  + K      A+        R+I ++NA+I G ++   
Sbjct: 74  IHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGS 133

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSG 118
                 LF  +R  G RPDA T   L +A     SL+  + VH + ++ G  +   + + 
Sbjct: 134 LDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNT 193

Query: 119 FIENYAKSGEIVSAEMCFRDCLDL--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +I  Y+K GE+  A+M F         +V++ +++  Y   G++  + + +  +   G +
Sbjct: 194 WIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFK 253

Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            +  ++ ++L +    +    G  IHG G ++G  S +   L N ++++Y RCG    A 
Sbjct: 254 PDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDIS--LINTLISMYSRCGDISSAT 311

Query: 234 KMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +FD ++    VSW+  I+   +     +A  LF  +     + +  T+++L+S  G   
Sbjct: 312 ILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTG 371

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  G  I  +       + V + NALI MY KCG +NDAR IF  L  +  VSW +MIA
Sbjct: 372 ALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIA 431

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-----MQVHSHIIK 405
             + NG F +ALD+F  + E  + PN  T  ++L+A  +   L++      M    + I 
Sbjct: 432 ACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGIN 491

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
            G  LD    SC+I   G+   L E+  V+ ++  K
Sbjct: 492 PG--LDH--YSCMIDLLGRKGKLIEALEVIQDMPMK 523



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 27/271 (9%)

Query: 2   IYSLLIKNGHHL------DPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALIS 54
           IY  LI +GH        D  L  TLIS +++  D   A   LFD  + R  +++ A+IS
Sbjct: 273 IYGFLI-HGHGFQLGCDSDISLINTLISMYSRCGDISSA-TILFDGMSIRTCVSWTAMIS 330

Query: 55  GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS 111
           G +   +   AL LF+ +   G +PD  T  SL+  C   G+L     +           
Sbjct: 331 GYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKK 390

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
            V + +  I+ YAK G +  A   F    +   V++TAM+     NGEF ++ ++F  + 
Sbjct: 391 DVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLS 450

Query: 172 SLGLELNEFSLTAVLGASFD---VKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLY 223
             G+E N  +  AVL A      +++G +        +G+  G     C      +++L 
Sbjct: 451 ESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSC------MIDLL 504

Query: 224 VRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
            R G+ ++A+++  ++  +PD   W   + A
Sbjct: 505 GRKGKLIEALEVIQDMPMKPDEGIWGALLGA 535


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 216/786 (27%), Positives = 367/786 (46%), Gaps = 102/786 (12%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           LL+ +  H + I    +++ + K      A         RD+ ++N L+SG  +  Q   
Sbjct: 61  LLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLV 120

Query: 65  ALKLFDRLRYQGLR-PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +L+ F  +   G   P+AFT +  +K+CG+             LG+ S    +   ++ +
Sbjct: 121 SLETFLSMHRSGDSWPNAFTLACAMKSCGA-------------LGWHSLALQLLAMVQKF 167

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
                         D  D   VA  A+V  +V  G  D +  +FV ++    E   F   
Sbjct: 168 --------------DSQDDSEVA-AALVDMFVRCGAVDLASRLFVRIK----EPTMFC-- 206

Query: 184 AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
                                            N+++  YV+      A+++FD + E D
Sbjct: 207 --------------------------------RNSMLAGYVKTYGVDHALELFDSMPERD 234

Query: 244 VVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VVSW+  ++A        EA  +  D++    +++  T  + L++      LR GKQ+ A
Sbjct: 235 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHA 294

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              +        + +AL+ +Y K G   +A+ +F+ L  +++V+W  +I+G+ + G F +
Sbjct: 295 QVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTE 354

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           ++++F  M    +  + + +A+++    +   L    Q+HS  +KSG +    + + LI+
Sbjct: 355 SVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLIS 414

Query: 421 TYGKCNALNESK---RVLSEID----------------------------KKNAVHINAL 449
            Y KC+ L  ++   R ++E D                            +KN +  NA+
Sbjct: 415 MYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAM 474

Query: 450 ASVLVYASCHAEALELYRTIWGS-CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
               +      + L +Y+ +        +  T+  + K CA +   + G  I    +K  
Sbjct: 475 LGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVG 534

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
              D  V +AVI MY KCG I +A++ F  +    +  WNAM+ GY+QHG   +   +F+
Sbjct: 535 LIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
            + K G KPD I+Y+AVL+ C H+GLV+E + Y   M   H + P LEH++C+VDLLGR 
Sbjct: 595 DILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRA 654

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  AK  ID MP+ P A +W +LLSAC I+GN +L  LA   + EL   +  +Y+L++
Sbjct: 655 GHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMA 714

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
            +YA AG  +D  ++RK M++K + K PGYSW+ V    H F A D SH Q   I K+L 
Sbjct: 715 KIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLD 774

Query: 749 KLYEHM 754
           +L E +
Sbjct: 775 ELMEKI 780



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 184/409 (44%), Gaps = 65/409 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I+N  H+DP +++ L+  + K   F+ A        +R+ + +  LISG  ++ 
Sbjct: 291 QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG 350

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               +++LF+++R + +  D F  ++L+  C S  +      +H +CLK G    V + +
Sbjct: 351 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 410

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAK   + SAE  FR   + D V++T+M+  Y   G   K++E F  M     E 
Sbjct: 411 SLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS----EK 466

Query: 178 NEFSLTAVLGASFD---------------------------------------VKEGEQI 198
           N  +  A+LGA                                           K G+QI
Sbjct: 467 NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQI 526

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
            G  VKVG +  +   + NA++ +Y +CG+ L+A K+FD +   D+VSW+  I       
Sbjct: 527 IGRTVKVGLI--IDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV---VS 312
            G +A  +F D+     + +  + + +LS      +++ GK      +    M+    +S
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK------FYFDMMKRAHNIS 638

Query: 313 IG----NALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENG 356
            G    + ++ + G+ G + +A+ + D +  K +   W ++++    +G
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG 687



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 173/429 (40%), Gaps = 78/429 (18%)

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDAR--------------------------------S 332
           VG    V + N L+  Y  CG ++DAR                                 
Sbjct: 33  VGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVE 92

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF-SLIPNGYTMASILEAVSNSK 391
           +F  +  +D  SWN++++GY ++  +  +L+ F  M       PN +T+A  +++     
Sbjct: 93  LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 152

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID------------ 439
               A+Q+ + + K     D  + + L+  + +C A++ + R+   I             
Sbjct: 153 WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLA 212

Query: 440 -------------------KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
                              +++ V  N + S L  +    EAL++   +      ++ +T
Sbjct: 213 GYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTT 272

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++  L ACA ++ L  GK +H   ++     D +V SA++++Y K G  ++AK  F  + 
Sbjct: 273 YTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH 332

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             +   W  ++ G+ Q+GC+ E   LFN+M    +  D+     +++ CC       +R 
Sbjct: 333 DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC-------SRM 385

Query: 601 YLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            L     LH      G I  +     ++ +  +   L+ A+     M    D   W S++
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMI 444

Query: 655 SACTIYGNI 663
           +A +  GN+
Sbjct: 445 TAYSQVGNV 453


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 175/548 (31%), Positives = 290/548 (52%), Gaps = 14/548 (2%)

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQIN 275
           ++N+Y +CG  ++A K+FD +   +VV W+  +       +   A  +F D+  +    +
Sbjct: 21  LVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPS 80

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
            +T+   L++      +  GKQ  AF  K       SIGNAL S+Y K G ++ +   F 
Sbjct: 81  NFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR 140

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
               KD +SW ++I+   +NG     L +F  ML  ++ PN +T+ S+L   S  +S   
Sbjct: 141 ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
            MQVHS   K G   +  + + L+  Y KC  ++E+K + + ++ KN +  NA+ +    
Sbjct: 201 GMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ 260

Query: 456 A-----------SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
           A               EAL +Y  +  S R+ +  T S +L  C+ +  LEQG+ IH   
Sbjct: 261 AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT 320

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           +K+ +  D+ V +A++DMY KCG+IE A++AF  +   +L  W +M+  +A+HG      
Sbjct: 321 IKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHAL 380

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
            LF  M   G +P++IT++ VL +C HAG+V EA  Y   M   + + P ++HY C+VD+
Sbjct: 381 QLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDM 440

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
             R+G L+ A   I +M + P+  IW  L++ C  +GN +LG  A  +LL+L+P +  TY
Sbjct: 441 FVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETY 500

Query: 685 VLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
           V+L N+Y SA  W DV  +R+ MKE+ + K   +S I + G  H F   +  H+ + E++
Sbjct: 501 VVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEVHSFKTNNRLHNHNAELH 560

Query: 745 KELIKLYE 752
             L  L +
Sbjct: 561 TLLNDLVD 568



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 239/480 (49%), Gaps = 23/480 (4%)

Query: 99  IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           +VH   +K G     +++S  +  YAK G +V+A   F +    + V +T ++ GYV N 
Sbjct: 1   MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60

Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
           + + + EVF +M   G   + F+L+  L A   ++    G+Q H F +K        + +
Sbjct: 61  QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHD--SSI 118

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDF 272
            NA+ +LY + G    +VK F E  E DV+SW+  I+A  D   A     LF ++ F + 
Sbjct: 119 GNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENV 178

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + N++T+ ++LS     +    G Q+ +   K+G    + I N+L+ +Y KCG +++A++
Sbjct: 179 EPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKN 238

Query: 333 IFDYLIFKDSVSWNSMIAGYSE------NGFFNQ-----ALDMFCHMLEFSLIPNGYTMA 381
           +F+ + +K+ ++WN+MIAG+++      + F  Q     AL M+  +      P+ +T++
Sbjct: 239 LFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLS 298

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           SIL   S   +L+Q  Q+H+  IKSGFL D  + + L+  Y KC ++  +++   ++  +
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358

Query: 442 NAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC--AAMTDLEQGKA 499
             +   ++ +          AL+L+  +  +    N  TF  VL AC  A M D E  + 
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVD-EALEY 417

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHG 558
              +  + +    +     ++DM+ + G +++A    +++    +   W  ++ G   HG
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 227/479 (47%), Gaps = 29/479 (6%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           +++ +IK G H +  + + L++ + K      A +   +   R+++ +  L++G  +  Q
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              A+++F  +   G  P  FT S  + AC SL+     +  H   +K   S    + + 
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y+K G + S+   FR+  + D +++T ++     NG       +F+EM    +E N
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 179 EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           +F+LT+VL     ++    G Q+H    K+G  S +   + N+++ LY++CG   +A  +
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNL--RITNSLVYLYLKCGCIDEAKNL 239

Query: 236 FDEITEPDVVSWSERIA--------------AACDGVEAFGLFKDLRFNDFQINEYTMIN 281
           F+ +   ++++W+  IA              A   G EA G++  L  +  + + +T+ +
Sbjct: 240 FNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L+       L  G+QI A   K GF+  V +G AL+ MY KCG +  AR  F  +  + 
Sbjct: 300 ILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRT 359

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            +SW SMI  ++ +G    AL +F  M      PN  T   +L A S++  + +A++ + 
Sbjct: 360 LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALE-YF 418

Query: 402 HIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            I++  + +   M    CL+  + +   L+E+  V+  +D    V  N    +L+ A C
Sbjct: 419 EIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMD----VEPNEFIWLLLIAGC 473



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 203/430 (47%), Gaps = 16/430 (3%)

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           + A   K G  E   + + L+++Y KCG + +AR +FD L  ++ V W +++ GY +N  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
              A+++F  MLE    P+ +T++  L A S+ +S+    Q H+ IIK     D S+ + 
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L + Y K  +L+ S +   E  +K+ +    + S           L L+  +     E N
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T + VL  C+ +   + G  +H L+ K  ++ ++ + ++++ +Y KCG I++AK  F 
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 538 KICRDSLAGWNAMMMGYAQ-----------HGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           ++   +L  WNAM+ G+AQ                E   ++ K+++ G KPD  T  ++L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           T C     + +    +   +   G +  +     +VD+  + G +E A+     M     
Sbjct: 302 TVCSRLAALEQGEQ-IHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360

Query: 647 AHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
              W S++++   +G     L L    +L   +P N+ T+V +    + AGM ++  +  
Sbjct: 361 IS-WTSMITSFARHGQSQHALQLFEDMRLAGFRP-NQITFVGVLAACSHAGMVDEALEYF 418

Query: 705 KEMKEKFLCK 714
           + M++++  K
Sbjct: 419 EIMQKEYKIK 428



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 200/433 (46%), Gaps = 40/433 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ +IK     D  +   L S ++KF     + +   +T  +D+I++  +IS      
Sbjct: 102 QFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNG 161

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           ++G  L+LF  + ++ + P+ FT +S++  C ++Q +++   VH +  KLG  S + + +
Sbjct: 162 RAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITN 221

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDK----SKEVFVEMRSL 173
             +  Y K G I  A+  F      + + + AM+ G+    +  K    +++   E   +
Sbjct: 222 SLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGM 281

Query: 174 GLELNE-------FSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
            L+LN        F+L+++L        +++GEQIH   +K GFLS V   +  A++++Y
Sbjct: 282 YLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVV--VGTALVDMY 339

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMI 280
            +CG    A K F +++   ++SW+  I   A       A  LF+D+R   F+ N+ T +
Sbjct: 340 DKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFV 399

Query: 281 NLLSSVGGERILRAGK---QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
            +L++     ++       +I    YK+    V+     L+ M+ + G++++A  +   +
Sbjct: 400 GVLAACSHAGMVDEALEYFEIMQKEYKIK--PVMDHYGCLVDMFVRLGRLDEAFDVIKRM 457

Query: 338 -IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP----------NGYTMASILEA 386
            +  +   W  +IAG   +G  N+ L  +       L P          N Y  A   E 
Sbjct: 458 DVEPNEFIWLLLIAGCRNHG--NEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWED 515

Query: 387 VSNSKSLKQAMQV 399
           VS  + L +  +V
Sbjct: 516 VSMVRRLMKEEKV 528


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 181/698 (25%), Positives = 362/698 (51%), Gaps = 15/698 (2%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+S ++++G   D ++S  +++ + K      A        + + +++NA+++   +   
Sbjct: 226 IHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGC 285

Query: 62  SGPALKLFDRLRYQG-LRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
              AL  F R++ QG + PD  TF +++ AC S   L   E++H   L+ G+ + + + +
Sbjct: 286 CVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGN 345

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+  G I +A   F   ++ D +++  ++ G+   G  D++  +F  M + G+  
Sbjct: 346 CIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITP 405

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           ++F+  +++  +  ++E + +    V+ G    V   L +A++N++ R G   +A  +FD
Sbjct: 406 DKFTFISIIDGTARMQEAKILSELMVESGVELDV--FLVSALINMHSRYGNVREARSLFD 463

Query: 238 EITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
           ++ + D+V W+  I++        +A G  + +R      N++T++  L++      L  
Sbjct: 464 DMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSE 523

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           GK I A   + GF    ++GNALI+MY KCG + +A  +F +   K+ VSWN++ A Y +
Sbjct: 524 GKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVF-HQCGKNLVSWNTIAAAYVQ 582

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
              + +AL +F  M    L  +  +  ++L   S   S  +  ++H+ ++++G   D  +
Sbjct: 583 RDKWREALQLFQEMQLEGLKADKVSFVTVLNGCS---SASEGRKIHNILLETGMESDHIV 639

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y    +L+E+ R+ S ++ ++ V  NA+ +         EA+++++ +     
Sbjct: 640 STALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGV 699

Query: 475 EVNGSTFSIVLKA--CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
             +  +F  VL A   ++ + L+Q + +  L     Y+ D  V +A++ M+ + G + +A
Sbjct: 700 APDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEA 759

Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
           +RAF +I     A WN ++  +AQHG   +   LF +M +   +PD IT ++VL++C H 
Sbjct: 760 RRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHG 819

Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
           GL+ E   + + M    G+    EHY C+VDLL R G L+ A+  + +MP+P    +W +
Sbjct: 820 GLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMT 879

Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNL 690
           LLSAC + G+       G +++EL P   + YV+LS++
Sbjct: 880 LLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLSSV 917



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 297/567 (52%), Gaps = 18/567 (3%)

Query: 47  ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGV 103
           +++N+L++  AR  Q   A ++F R++ QGL PD  TF +++  C   G L   +++HG 
Sbjct: 69  VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGF 128

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
            L+ G    V + +  I+ Y K G +  A   F      D V++T+M+  YV +    ++
Sbjct: 129 VLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEA 188

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            E+F  MR  G+  N  +    + A   V+   +G+ IH   ++ GF S V   ++ AI+
Sbjct: 189 LELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVV--VSCAIV 246

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG----VEAFGLFKDLRFN-DFQIN 275
           N+Y +CG   DA ++F+ +  P+ VSW+  I AAC      VEA   F+ ++       +
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNA-IVAACTQHGCCVEALWYFQRMQLQGGITPD 305

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
           + T I +L++      L  G+ +     + G+   + +GN +++MY  CG++++A + F 
Sbjct: 306 KVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFS 365

Query: 336 YLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            ++ +D++SWN++I+G+++ GF ++A+ +F  ML   + P+ +T  SI++  +    +++
Sbjct: 366 TMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR---MQE 422

Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
           A  +   +++SG  LD  ++S LI  + +   + E++ +  ++  ++ V   ++ S  V 
Sbjct: 423 AKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQ 482

Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
                +AL   R +       N  T    L ACA++T L +GK IH  A++  +     V
Sbjct: 483 HGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAV 542

Query: 516 ESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV 575
            +A+I+MY KCG +E+A R F + C  +L  WN +   Y Q   + E   LF +M   G+
Sbjct: 543 GNALINMYAKCGCLEEADRVFHQ-CGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGL 601

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYL 602
           K D+++++ VL  C  A   R+    L
Sbjct: 602 KADKVSFVTVLNGCSSASEGRKIHNIL 628



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 179/703 (25%), Positives = 342/703 (48%), Gaps = 29/703 (4%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  +++ G   + ++ T+LI  + K      A R       +D++++ ++I    +  +
Sbjct: 125 LHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDR 184

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSG 118
              AL+LF R+R  G+ P+  T+++ + AC    S+ + +++H   L+ GF S V +   
Sbjct: 185 CVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCA 244

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLEL 177
            +  Y K G +  A   F      + V++ A+V     +G   ++   F  M+   G+  
Sbjct: 245 IVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITP 304

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           ++ +   +L A      +  GE +H   ++ G+ + +   + N IM +Y  CG+  +A  
Sbjct: 305 DKVTFITILNACSSPATLTFGELLHECILQCGYDTHLI--VGNCIMTMYSSCGRIDNAAA 362

Query: 235 MFDEITEPDVVSWSERI-----AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            F  + E D +SW+  I     A  CD  EA  LF+ +       +++T I++   + G 
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCD--EAVHLFRRMLAEGITPDKFTFISI---IDGT 417

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             ++  K +     + G    V + +ALI+M+ + G V +ARS+FD +  +D V W S+I
Sbjct: 418 ARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSII 477

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
           + Y ++G  + AL     M    L+ N +T+ + L A ++  +L +   +H+H I+ GF 
Sbjct: 478 SSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFA 537

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
              ++ + LI  Y KC  L E+ RV  +   KN V  N +A+  V      EAL+L++ +
Sbjct: 538 ASPAVGNALINMYAKCGCLEEADRVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEM 596

Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
                + +  +F  VL  C++ +   +G+ IH + L+   + D  V +A+++MY    ++
Sbjct: 597 QLEGLKADKVSFVTVLNGCSSAS---EGRKIHNILLETGMESDHIVSTALLNMYTASKSL 653

Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT-- 587
           ++A R F ++    +  WNAM+ G A+HG   E   +F +M   GV PD+I+++ VL   
Sbjct: 654 DEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAF 713

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
           S      +++AR     +SD  G          IV + GR G L  A+   +++    DA
Sbjct: 714 SGSSPSSLKQARLVEKLISD-QGYETDTIVGNAIVSMFGRSGRLAEARRAFERIR-ERDA 771

Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
             W  +++A   +G ++  L    ++ +   +PD+ +   +LS
Sbjct: 772 ASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLS 814



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 242/492 (49%), Gaps = 22/492 (4%)

Query: 215 LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVEAFGLFKDLR--FND 271
           + NA +++Y +CG   DAV +F  +  P  VSW+  +AA A DG          R     
Sbjct: 39  VQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQG 98

Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
              +  T + +L        L  GK +  F  + G    V +G +LI MYGKCG V DAR
Sbjct: 99  LAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDAR 158

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
            +FD L  +D VSW SMI  Y ++    +AL++F  M    ++PN  T A+ + A ++ +
Sbjct: 159 RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVE 218

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           S+     +HS +++ GF   D ++SC ++  YGKC +L +++ V   +   N V  NA+ 
Sbjct: 219 SMADGKLIHSQVLEDGF-ESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIV 277

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGS------TFSIVLKACAAMTDLEQGKAIHCLA 504
           +      C  EAL  ++ +     ++ G       TF  +L AC++   L  G+ +H   
Sbjct: 278 AACTQHGCCVEALWYFQRM-----QLQGGITPDKVTFITILNACSSPATLTFGELLHECI 332

Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVS 564
           L+  YD  + V + ++ MY  CG I++A   F  +       WN ++ G+AQ G   E  
Sbjct: 333 LQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAV 392

Query: 565 NLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDL 624
           +LF +M   G+ PD+ T+++++        ++EA+     M +  G+   +   + ++++
Sbjct: 393 HLFRRMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVE-SGVELDVFLVSALINM 448

Query: 625 LGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTY 684
             R G +  A+   D M    D  +W S++S+   +G+ D   L  ++L+ L+    + +
Sbjct: 449 HSRYGNVREARSLFDDMK-DRDIVMWTSIISSYVQHGSSD-DALGCTRLMRLEGLMGNDF 506

Query: 685 VLLSNLYASAGM 696
            L++ L A A +
Sbjct: 507 TLVTALNACASL 518



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 253/529 (47%), Gaps = 19/529 (3%)

Query: 83  TFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDC 139
           TF +L+  C    ++ E   VH       F     + +  I  Y K G +  A   F+  
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63

Query: 140 LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGE 196
                V++ +++  +  +G+F ++ ++F  M+  GL  +  +   VL    A  D+  G+
Sbjct: 64  DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123

Query: 197 QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD 256
            +HGF ++ G    V   +  +++ +Y +CG   DA ++FD++   DVVSW+  I     
Sbjct: 124 LLHGFVLEAGLERNVM--VGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQ 181

Query: 257 G---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSI 313
               VEA  LF  +R +    N  T    +S+      +  GK I +   + GF   V +
Sbjct: 182 HDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVV 241

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFS 372
             A+++MYGKCG + DAR +F+ +   ++VSWN+++A  +++G   +AL  F  M L+  
Sbjct: 242 SCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGG 301

Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI--SCLITTYGKCNALNE 430
           + P+  T  +IL A S+  +L     +H  I++ G+  D  +I  +C++T Y  C  ++ 
Sbjct: 302 ITPDKVTFITILNACSSPATLTFGELLHECILQCGY--DTHLIVGNCIMTMYSSCGRIDN 359

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           +    S + +++A+  N + S    A    EA+ L+R +       +  TF  ++   A 
Sbjct: 360 AAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR 419

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           M   ++ K +  L +++  + D+F+ SA+I+M+ + G + +A+  F  +    +  W ++
Sbjct: 420 M---QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSI 476

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
           +  Y QHG   +       M   G+  ++ T +  L +C     + E +
Sbjct: 477 ISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGK 525



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 124/251 (49%), Gaps = 11/251 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I+++L++ G   D I+ST L++ +T       A R     + RDI+++NA+I+G A   
Sbjct: 623 KIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHG 682

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKA-----CGSLQENEIVHGVCLKLGFSSRVYL 115
            S  A+++F R++ +G+ PD  +F +++ A       SL++  +V  +    G+ +   +
Sbjct: 683 LSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIV 742

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  +  + +SG +  A   F    + D  ++  +V  +  +GE +++ ++F  M+    
Sbjct: 743 GNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESS 802

Query: 176 ELNEFSLTAVLGASFD---VKEG-EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
             +  +L +VL A      ++EG       G + G ++G   H    +++L  R G+   
Sbjct: 803 RPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFG-IAGSQEHY-GCVVDLLARAGRLDQ 860

Query: 232 AVKMFDEITEP 242
           A ++  ++  P
Sbjct: 861 AEELLRKMPVP 871


>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
 gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 262/475 (55%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +LL      R    GK       ++G        N L++MY KCG +  A  +FD +  +
Sbjct: 3   SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
             VSWN MI    +NG   +A+D+F  M       + +T++S++ A +    +    Q+H
Sbjct: 63  SMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLH 122

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
           +  IK+    D  + + LI  Y KC ++ ++  V   + ++N V  +++ +  V    + 
Sbjct: 123 AFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYE 182

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           E L L+        E N    S V++ACA +  L +G+ +H +  +  +  + FV SA++
Sbjct: 183 EGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALV 242

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG+IE+A   F  I + ++  WNA++ G+A+H C  EV NLF +M + G++PDE+
Sbjct: 243 DMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEV 302

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           TY+AVL++C H GLV + R+Y   M+  H + P + HY+C+VD+LGR GL+  A   + +
Sbjct: 303 TYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTK 362

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           MP    A +W SLL++C I+GN++L  +A   L E++PD    YVLL+N YA++  W + 
Sbjct: 363 MPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEA 422

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            K RK +K   + KE G SWI +    H F AG+ +H +  +IY EL  L E M 
Sbjct: 423 AKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNLLEEMT 477



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 200/389 (51%), Gaps = 9/389 (2%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           G+  HG  +++G  +      +N +MN+Y +CG    A K+FDEI E  +VSW+  I   
Sbjct: 17  GKACHGQVIRLGLETDTLT--SNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTC 74

Query: 255 CDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVV 311
               E   A  +F +++      +E+T+ +++ +   +  +   +Q+ AF  K      V
Sbjct: 75  VQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADV 134

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            +G ALI +Y KCG + DA  +F+ +  ++ V+W+S++AG+ +N  + + L +F    E 
Sbjct: 135 FVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEM 194

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            L  N + ++S++ A +   +L +  QVH+ + ++GF  ++ + S L+  Y KC ++ E+
Sbjct: 195 GLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEA 254

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
             +   I+KKN V  NA+ S     +C +E + L+  +  +  + +  T+  VL AC  +
Sbjct: 255 YVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHV 314

Query: 492 TDLEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNA 549
             +++G++   L  +      ++   S ++D+  + G + +A     K+   + A  W +
Sbjct: 315 GLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGS 374

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
           ++     HG   E++ +  K + F ++PD
Sbjct: 375 LLASCRIHGNL-ELAEIAAK-NLFEMEPD 401



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 181/368 (49%), Gaps = 22/368 (5%)

Query: 86  SLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           SL++ C   +E    +  HG  ++LG  +     +  +  Y+K G I  A   F +  + 
Sbjct: 3   SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIH 199
             V++  M+   V NGE +K+ ++F+EM+  G   +EF++++V+    A  DV    Q+H
Sbjct: 63  SMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLH 122

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
            F +K    + V   +  A++++Y +CG   DA  +F+ + E + V+WS  +A       
Sbjct: 123 AFAIKAVVDADV--FVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNEL 180

Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
             E   LF   +    + N++ + +++ +  G   L  G+Q+ A   + GF     + +A
Sbjct: 181 YEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASA 240

Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           L+ MY KCG + +A  +F  +  K+ V WN++I+G++++   ++ +++F  M +  + P+
Sbjct: 241 LVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPD 300

Query: 377 GYTMASILEA------VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             T  ++L A      V   +S    M    H +    L      SC++   G+   ++E
Sbjct: 301 EVTYVAVLSACVHVGLVDKGRSYFDLM-TREHNVSPNVL----HYSCMVDILGRGGLVHE 355

Query: 431 SKRVLSEI 438
           +  +++++
Sbjct: 356 AHELMTKM 363



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 176/357 (49%), Gaps = 15/357 (4%)

Query: 6   LIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPA 65
           +I+ G   D + S  L++ ++K    RRA +   +   R ++++N +I    +  +   A
Sbjct: 24  VIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKA 83

Query: 66  LKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
           + +F  ++ +G     FT SS+V AC   G +     +H   +K    + V++ +  I+ 
Sbjct: 84  IDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDV 143

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAK G I  A   F    + ++V ++++V G+V N  +++   +F   + +GLE N+F +
Sbjct: 144 YAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMI 203

Query: 183 TAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
           ++V+ A   +    EG Q+H    + GF  G  N + +A++++Y +CG   +A  +F  I
Sbjct: 204 SSVIRACAGLAALIEGRQVHAIVCRTGF--GPNNFVASALVDMYAKCGSIEEAYVLFCNI 261

Query: 240 TEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
            + +VV W+  I+     AC   E   LF++++    Q +E T + +LS+     ++  G
Sbjct: 262 EKKNVVLWNAIISGFAKHACSS-EVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKG 320

Query: 296 KQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIA 350
           +        +      V   + ++ + G+ G V++A  +   + F  + S W S++A
Sbjct: 321 RSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLA 377



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/91 (21%), Positives = 52/91 (57%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++++ + G   +  +++ L+  + K      A+    + + ++++ +NA+ISG A+  
Sbjct: 221 QVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHA 280

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            S   + LF+ ++  G++PD  T+ +++ AC
Sbjct: 281 CSSEVMNLFEEMQQTGMQPDEVTYVAVLSAC 311


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 216/786 (27%), Positives = 367/786 (46%), Gaps = 102/786 (12%)

Query: 5   LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP 64
           LL+ +  H + I    +++ + K      A         RD+ ++N L+SG  +  Q   
Sbjct: 81  LLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLV 140

Query: 65  ALKLFDRLRYQGLR-PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
           +L+ F  +   G   P+AFT +  +K+CG+             LG+ S    +   ++ +
Sbjct: 141 SLETFLSMHRSGDSWPNAFTLACAMKSCGA-------------LGWHSLALQLLAMVQKF 187

Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
                         D  D   VA  A+V  +V  G  D +  +FV ++    E   F   
Sbjct: 188 --------------DSQDDSEVA-AALVDMFVRCGAVDLASRLFVRIK----EPTMFC-- 226

Query: 184 AVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
                                            N+++  YV+      A+++FD + E D
Sbjct: 227 --------------------------------RNSMLAGYVKTYGVDHALELFDSMPERD 254

Query: 244 VVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           VVSW+  ++A        EA  +  D++    +++  T  + L++      LR GKQ+ A
Sbjct: 255 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHA 314

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
              +        + +AL+ +Y K G   +A+ +F+ L  +++V+W  +I+G+ + G F +
Sbjct: 315 QVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTE 374

Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
           ++++F  M    +  + + +A+++    +   L    Q+HS  +KSG +    + + LI+
Sbjct: 375 SVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLIS 434

Query: 421 TYGKCNALNESK---RVLSEID----------------------------KKNAVHINAL 449
            Y KC+ L  ++   R ++E D                            +KN +  NA+
Sbjct: 435 MYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAM 494

Query: 450 ASVLVYASCHAEALELYRTIWGS-CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
               +      + L +Y+ +        +  T+  + K CA +   + G  I    +K  
Sbjct: 495 LGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVG 554

Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
              D  V +AVI MY KCG I +A++ F  +    +  WNAM+ GY+QHG   +   +F+
Sbjct: 555 LIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 614

Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
            + K G KPD I+Y+AVL+ C H+GLV+E + Y   M   H + P LEH++C+VDLLGR 
Sbjct: 615 DILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRA 674

Query: 629 GLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLS 688
           G L  AK  ID MP+ P A +W +LLSAC I+GN +L  LA   + EL   +  +Y+L++
Sbjct: 675 GHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMA 734

Query: 689 NLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELI 748
            +YA AG  +D  ++RK M++K + K PGYSW+ V    H F A D SH Q   I K+L 
Sbjct: 735 KIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLD 794

Query: 749 KLYEHM 754
           +L E +
Sbjct: 795 ELMEKI 800



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 184/409 (44%), Gaps = 65/409 (15%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I+N  H+DP +++ L+  + K   F+ A        +R+ + +  LISG  ++ 
Sbjct: 311 QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG 370

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               +++LF+++R + +  D F  ++L+  C S  +      +H +CLK G    V + +
Sbjct: 371 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 430

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I  YAK   + SAE  FR   + D V++T+M+  Y   G   K++E F  M     E 
Sbjct: 431 SLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS----EK 486

Query: 178 NEFSLTAVLGASFD---------------------------------------VKEGEQI 198
           N  +  A+LGA                                           K G+QI
Sbjct: 487 NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQI 546

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
            G  VKVG +  +   + NA++ +Y +CG+ L+A K+FD +   D+VSW+  I       
Sbjct: 547 IGRTVKVGLI--IDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 604

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV---VS 312
            G +A  +F D+     + +  + + +LS      +++ GK      +    M+    +S
Sbjct: 605 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK------FYFDMMKRAHNIS 658

Query: 313 IG----NALISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYSENG 356
            G    + ++ + G+ G + +A+ + D +  K +   W ++++    +G
Sbjct: 659 PGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHG 707



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 173/429 (40%), Gaps = 78/429 (18%)

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDAR--------------------------------S 332
           VG    V + N L+  Y  CG ++DAR                                 
Sbjct: 53  VGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVE 112

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF-SLIPNGYTMASILEAVSNSK 391
           +F  +  +D  SWN++++GY ++  +  +L+ F  M       PN +T+A  +++     
Sbjct: 113 LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 172

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI------------- 438
               A+Q+ + + K     D  + + L+  + +C A++ + R+   I             
Sbjct: 173 WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLA 232

Query: 439 ------------------DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
                              +++ V  N + S L  +    EAL++   +      ++ +T
Sbjct: 233 GYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTT 292

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++  L ACA ++ L  GK +H   ++     D +V SA++++Y K G  ++AK  F  + 
Sbjct: 293 YTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH 352

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREART 600
             +   W  ++ G+ Q+GC+ E   LFN+M    +  D+     +++ CC       +R 
Sbjct: 353 DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC-------SRM 405

Query: 601 YLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
            L     LH      G I  +     ++ +  +   L+ A+     M    D   W S++
Sbjct: 406 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMI 464

Query: 655 SACTIYGNI 663
           +A +  GN+
Sbjct: 465 TAYSQVGNV 473


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 172/490 (35%), Positives = 262/490 (53%), Gaps = 2/490 (0%)

Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
           A   +  ++F   + N  T   L  +      +  G+       + G  E   + ++LI+
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           MY +CG++ DAR +FD +  KD VSWNSMI+GYS+     +A+ +F  M+E    PN  +
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
           + S+L A      LK    V   ++++   L+  M S LI  YGKC  L  ++R+   + 
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
           KK+ V  NA+ +         EA++L++ +  S    +  T   +L ACA++  L+ GK 
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350

Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
           +   A +  +  D++V +A++DMY KCG++++A R F  +   +   WNAM+   A HG 
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQ 410

Query: 560 YHEVSNLFNKMSKFG--VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEH 617
             E   LF  M   G  V P++IT++ VL++C HAGLV E R     MS   GL+P++EH
Sbjct: 411 AQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEH 470

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y+C+VDL  R G LE A   +  MP  PD  I  +LL AC    NID+       LLEL+
Sbjct: 471 YSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELE 530

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           P N   YV+ S LYA+   W+D  ++R  MK+K + K PG SWI +    H F+AGD  H
Sbjct: 531 PSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH 590

Query: 738 SQSKEIYKEL 747
            +  EI++ L
Sbjct: 591 QEWIEIHQIL 600



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 237/465 (50%), Gaps = 24/465 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-F 59
           QI++ L+ N  H       + +       DF  A  F  +  +    ++N +I GL+  +
Sbjct: 50  QIHAQLLTNSIHK----PNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAW 105

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
            +S  AL+ + R+++ GL+P+  T+  L  AC +L   +   + H   ++ G     ++ 
Sbjct: 106 NKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS 165

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I  YA+ G++  A   F +    D V++ +M+ GY       ++  +F EM   G +
Sbjct: 166 HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225

Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNH-LNNAIMNLYVRCGQKLDA 232
            NE SL +VLGA     D+K G  +  F V+        N+ + +A++++Y +CG  + A
Sbjct: 226 PNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM---TLNYFMGSALIHMYGKCGDLVSA 282

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
            ++FD + + D V+W+  I   A +G+  EA  LF+D+R +    ++ T+I +LS+    
Sbjct: 283 RRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASI 342

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L  GKQ++ +  + GF + V +G AL+ MY KCG +++A  +F  +  K+ VSWN+MI
Sbjct: 343 GALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMI 402

Query: 350 AGYSENGFFNQALDMFCHMLE--FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
           +  + +G   +AL +F  M+    ++ PN  T   +L A  ++  + +  ++  H++ S 
Sbjct: 403 SALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLF-HMMSSS 461

Query: 408 FLLDDSM--ISCLITTYGKCNALNES-KRVLSEIDKKNAVHINAL 449
           F L   +   SC++  + +   L E+   V++  +K + V + AL
Sbjct: 462 FGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 219/769 (28%), Positives = 380/769 (49%), Gaps = 44/769 (5%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDI-ITYNALISGLARFCQSGP--ALKLFDRLRYQ-GL 77
           +SH  +     +A   LFD+  R   + +N +I G    C + P  AL  + R+R     
Sbjct: 44  LSHLCRQGHPHQALH-LFDSIPRPTTVLWNTIIIGF--ICNNMPIDALLFYARMRASPSP 100

Query: 78  RPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAK---SGEIVS 131
           + D++TFSS +KAC    SL+  + +H   L+  F S   + +  +  Y+        + 
Sbjct: 101 KFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLG 160

Query: 132 AEMCFRDCLDL-----------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
               F +C DL           + VA+  M+  YV      ++ ++F  M  +G+     
Sbjct: 161 TAYDFNNC-DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPV 219

Query: 181 SLTAVLGASF---DVKEGEQIHGFGVKVG--FLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           S   V  A +   D      ++G  VK+G  F+      + ++ + +Y   G    A ++
Sbjct: 220 SFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDF--FVVSSAIFMYAELGCVDFAREI 277

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLF-KDLRFNDFQINEYTMINLLSSVGGERI 291
           FD   E +   W+  I         +EA  LF + +    F +++ T ++ L+++   + 
Sbjct: 278 FDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQW 337

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+Q+ A+  K   +  V I NA+I MY +CG +  +  +F  ++ +D V+WN+M++ 
Sbjct: 338 LELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSA 397

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           + +NG  ++ L +   M +   + +  T+ ++L   SN +S +   Q H+++I+ G   +
Sbjct: 398 FVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE 457

Query: 412 DSMISCLITTYGKCNALNESKRVL---SEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             M S LI  Y K   +  ++++    S+ D+  A   NA+ +         E   ++R 
Sbjct: 458 -GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATW-NAMIAGYTQNGLSEEGFAVFRK 515

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
           +       N  T + +L AC  M  +  GK IH  A++   ++++FV +A++DMY K G 
Sbjct: 516 MIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGA 575

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           I  A+  F +    +   +  M+  Y QHG      +LF+ M   G+KPD +T++A+L++
Sbjct: 576 ITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSA 635

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C +AGLV E       M   + + P  EHY C+ D+LGRVG +  A   +  +    +  
Sbjct: 636 CSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTF 695

Query: 649 -IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNEST--YVLLSNLYASAGMWNDVGKLRK 705
            IW SLL AC I+G  +LG +  +KLLE++  +  T  +VLLSN+YA+ G W++V ++RK
Sbjct: 696 GIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRK 755

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           EM++K L KE G SW+ V G+ + F + D  H Q  EIY+ L KL   M
Sbjct: 756 EMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEM 804



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 143/309 (46%), Gaps = 14/309 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K+   L  ++   +I  +++      +F+   +   RD++T+N ++S   +  
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
                L L   ++ QG   D+ T ++L+    +L+  EI    H   ++ G      + S
Sbjct: 403 LDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDS 461

Query: 118 GFIENYAKSGEIVSAEMCFRDC--LDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
             I+ YAKSG I +A+  F      D D   + AM+ GY  NG  ++   VF +M    +
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521

Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N  +L ++L A   +     G+QIHGF ++      V   +  A++++Y + G    A
Sbjct: 522 RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNV--FVGTALLDMYSKSGAITYA 579

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F E  E + V+++  I++      G  A  LF  +  +  + +  T + +LS+    
Sbjct: 580 ENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYA 639

Query: 290 RILRAGKQI 298
            ++  G +I
Sbjct: 640 GLVDEGLRI 648


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 201/628 (32%), Positives = 332/628 (52%), Gaps = 37/628 (5%)

Query: 167 FVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F  M++  +  N F+  A+L A   ++      Q+H +  ++G  +        A+++ Y
Sbjct: 40  FTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAAD--RFSAAALVDAY 97

Query: 224 VRCGQKLDAVKMFDEITEP--DVVSWSERIAA-ACDGV--EAFGLFKDLRF-NDFQINEY 277
            +CG    A ++FDE+ E   DVVSW+  I+A + +G   EAF  F  +R+   +  +E 
Sbjct: 98  GKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSEC 157

Query: 278 TMINLLS--------SVG-GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
             ++++S        +VG G   LR G  +     K GF     +GN+++ MY  C  V 
Sbjct: 158 CGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVG 217

Query: 329 DARSIFDYLIF--KDSVSWNSMIAGYSENGFFNQALDMFCHMLE---FSLIPNGYTMASI 383
            A  +F+ +    +D VSWNS+I+G++ NG   +AL  F  M+     ++ PN  T+ ++
Sbjct: 218 GAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIAL 277

Query: 384 LEAVSNSKSLKQAMQVHSHIIK--SGFLL--DDSMISCLITTYGKCNALNESKRVLSEID 439
           L++ +    ++ +  VH +I    S  L+  D  +++ L+  + +C  L  ++ +   ++
Sbjct: 278 LKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVE 337

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIW------GSCREVNGSTFSIVLKACAAMTD 493
            KN V  +A+ +     SC  EAL L+R +       G   + N  T   V+ AC+ +  
Sbjct: 338 GKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGA 397

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMM 551
                 IH  A+    DQD  + SA+IDM  KCG IE  ++ F ++     ++  W++M+
Sbjct: 398 SRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMI 457

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
                HG       LF++M   G +P+EITY++VL++C HAGLV + ++  + M   +G+
Sbjct: 458 GAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGM 517

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P  +HYAC+VDLLGR G L+ A   I  MPI  D  +W SLL+AC ++GN  LG +   
Sbjct: 518 SPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEK 577

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           K+L L  ++   +VLL+N+Y  AG W+DV ++R E++   L K PG S+I +G   + F 
Sbjct: 578 KILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFM 637

Query: 732 AGDSSHSQSKEIYKELIKLYEHMVATAK 759
           A D SH +S+ IYKEL  L E +   AK
Sbjct: 638 AEDRSHPESEMIYKELDGLDERVRKAAK 665



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 267/562 (47%), Gaps = 53/562 (9%)

Query: 42  QNRDIITYNALISGLARFCQSGP--ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--- 96
            ++D   +N+LI   A+     P  AL  F R++   +  + FTF +L+KAC +L+    
Sbjct: 14  SHKDTFHWNSLI---AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGY 154
              VH    +LG ++  +  +  ++ Y K G    A   F +  +  +D V++TA++  Y
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 155 VWNGEFDKSKEVFVEMRSL-GLELNE------FSLTAVLGA------SFDVKEGEQIHGF 201
             NG  D++ + F  MR + G + +E       SL A++ A      S  ++ G  +HG 
Sbjct: 131 SSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--EITEPDVVSWSERIAAAC---D 256
            VK GF  GV  HL N+++++Y  C     A ++F+   I + DVVSW+  I+      +
Sbjct: 191 VVKYGF--GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGE 248

Query: 257 GVEAFGLFKDL---RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC----YKVGFME 309
              A   F+D+     +  + N  T+I LL S      +     +  +       +   +
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V +  AL+ M+ +CG +  AR IFD +  K+ V W++MIAGY +     +AL +F  ML
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQML 368

Query: 370 -EFSLI-----PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            E +++     PN  T+ S++ A S   + + A  +H + + +G   D  + S LI    
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCA 428

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWGSCREVNGST 480
           KC  +   ++V SE+D+     + + +S++     H E   ALEL+  +     E N  T
Sbjct: 429 KCGDIEHGRQVFSEMDESTRT-VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEIT 487

Query: 481 FSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFR 537
           +  VL AC+    +EQGK+  C  +++  Y      +  + ++D+  + G +++A     
Sbjct: 488 YISVLSACSHAGLVEQGKS--CFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVIL 545

Query: 538 KI-CRDSLAGWNAMMMGYAQHG 558
            +  +  LA W +++     HG
Sbjct: 546 NMPIKADLALWGSLLAACHLHG 567



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 216/498 (43%), Gaps = 50/498 (10%)

Query: 239 ITEPDVVSWSERIA--AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           I+  D   W+  IA  A  +   A   F  ++ +    N +T   LL +    R L    
Sbjct: 13  ISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTL 72

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK--DSVSWNSMIAGYSE 354
           Q+ A+  ++G         AL+  YGKCG    A  +FD +     D VSW ++I+ YS 
Sbjct: 73  QVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSS 132

Query: 355 NGFFNQALDMFCHMLEFSLIPN----GYTMASILEAVS------NSKSLKQAMQVHSHII 404
           NG  ++A   F  M            G  + S+   VS       S  L++   VH  ++
Sbjct: 133 NGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVV 192

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYASCHAEA 462
           K GF +   + + ++  Y  C  +  + RV +   I++++ V  N+L S          A
Sbjct: 193 KYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERA 252

Query: 463 LELYRTIWG---SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD-----QDIF 514
           L  +  +     S  E N  T   +LK+CA +  +E    +H   + +R+      +D+ 
Sbjct: 253 LRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVH-EYISSRHSSLLVAKDVV 311

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++DM+ +CG +  A+  F  +   ++  W+AM+ GY Q  C  E   LF +M   G
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEG 371

Query: 575 ------VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
                 VKP+ +T ++V+ +C   G  R A + +   +   GL       + ++D+  + 
Sbjct: 372 NMVGVEVKPNAVTLVSVIAACSRLGASRSA-SMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 629 GLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYGNIDLGLLAGSKLLEL---------QP 678
           G +E  +    +M       + W S++ A  I+G        G + LEL         +P
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE-------GKRALELFSEMRTGGYEP 483

Query: 679 DNESTYVLLSNLYASAGM 696
            NE TY+ + +  + AG+
Sbjct: 484 -NEITYISVLSACSHAGL 500



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 175/380 (46%), Gaps = 36/380 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARF 59
           ++ L++K G  +   L  +++  ++   D   A+R       + RD++++N+LISG    
Sbjct: 187 VHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLN 246

Query: 60  CQSGPALKLFDRLRYQG---LRPDAFTFSSLVKAC---GSLQENEIVHGVC----LKLGF 109
            ++  AL+ F+ +  +G   + P+  T  +L+K+C   G ++ +  VH         L  
Sbjct: 247 GEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLV 306

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           +  V +++  ++ +A+ G +  A   F      + V ++AM+ GY      +++  +F +
Sbjct: 307 AKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQ 366

Query: 170 M----RSLGLELNEFSLTAV--------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
           M      +G+E+   ++T V        LGAS   +    IH + V  G        + +
Sbjct: 367 MLMEGNMVGVEVKPNAVTLVSVIAACSRLGAS---RSASMIHKYAVATGLDQDA--RIAS 421

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEP--DVVSWSERIAAA---CDGVEAFGLFKDLRFNDF 272
           A++++  +CG      ++F E+ E    VVSWS  I A     +G  A  LF ++R   +
Sbjct: 422 ALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGY 481

Query: 273 QINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           + NE T I++LS+     ++  GK    +     G          L+ + G+ G +++A 
Sbjct: 482 EPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAH 541

Query: 332 S-IFDYLIFKDSVSWNSMIA 350
           + I +  I  D   W S++A
Sbjct: 542 NVILNMPIKADLALWGSLLA 561


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 172/538 (31%), Positives = 284/538 (52%), Gaps = 27/538 (5%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINE 276
           N +M   +  G   DA+ +F E+ +         +A+ C                   ++
Sbjct: 87  NVLMRALLHAGHPEDALHLFVEMLD---------VASVCP------------------DQ 119

Query: 277 YTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY 336
           +T+   L S      L  G+ IQA+  K G M    + ++LI MY  C  V  A+ +FD 
Sbjct: 120 HTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDA 179

Query: 337 LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
           +     V WN++I  Y +NG + + ++MF  MLE  +  +  T+ S++ A       K  
Sbjct: 180 VEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLG 239

Query: 397 MQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
             V  ++ + G + + ++++ LI  Y KC  L +++R+   +  ++ V  +A+ S    A
Sbjct: 240 KWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQA 299

Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
               EAL L+  +  +  E N  T   VL ACA +  LE GK +H    + R    I + 
Sbjct: 300 DQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG 359

Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
           +A++D Y KCG I+DA  AF  +   +   W A++ G A +G   E   LF+ M K  ++
Sbjct: 360 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIE 419

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P ++T++ VL +C H+ LV E R +   M+  +G+ P+ EHY C+VDLLGR GL++ A  
Sbjct: 420 PTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQ 479

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  MPI P+A IW++LLS+C ++ N+++G  A  +++ L P +   Y+LLSN+YAS G 
Sbjct: 480 FIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQ 539

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           W +   +RKEMK++ + K PG S I + G    F+A DS H Q KEIY+++ ++ + +
Sbjct: 540 WKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRI 597



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 234/519 (45%), Gaps = 63/519 (12%)

Query: 1   QIYSLLIKNG---------HHL--DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITY 49
           Q+++ LIK+G         H L      S TL+ +      FR   R    T       Y
Sbjct: 34  QLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSL--FRLGPRPPLSTP-----CY 86

Query: 50  NALISGLARFCQSGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGV---CL 105
           N L+  L        AL LF + L    + PD  T +  +K+C  +   ++  G+    +
Sbjct: 87  NVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAV 146

Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
           K G  +  +++S  I  YA   ++ +A++ F    +   V + A++  Y+ NG + +  E
Sbjct: 147 KRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVE 206

Query: 166 VFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
           +F  M  +G+  +E +L +V+   G   D K G+ +  +  + G +     +L  A++++
Sbjct: 207 MFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRN--RNLMTALIDM 264

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTM 279
           Y +CG+   A ++FD +   DVV+WS  I+    A    EA  LF +++  + + N+ TM
Sbjct: 265 YAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTM 324

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           +++LS+      L  GK + ++  +      + +G AL+  Y KCG ++DA   F+ +  
Sbjct: 325 VSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPV 384

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+S +W ++I G + NG   +AL++F  M + S+ P   T   +L A S           
Sbjct: 385 KNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACS----------- 433

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           HS +++ G    DSM       YG                K  A H   +  +L  A   
Sbjct: 434 HSCLVEEGRRHFDSMTQ----DYGI---------------KPRAEHYGCVVDLLGRAGLI 474

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
            EA +  RT+     E N   +  +L +CA   ++E G+
Sbjct: 475 DEAYQFIRTM---PIEPNAVIWRALLSSCAVHKNVEIGE 510



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 213/468 (45%), Gaps = 40/468 (8%)

Query: 125 KSGEIVSAEMCFRDCLD-----------------------LDNVAYTAMVCGYVWNGEFD 161
           KSGE+  +  CF   L+                       L    Y  ++   +  G  +
Sbjct: 41  KSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPE 100

Query: 162 KSKEVFVEMRSLG-LELNEFSLTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHL 215
            +  +FVEM  +  +  ++ ++   L +     + DV  G  I  + VK G ++     +
Sbjct: 101 DALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRG--IQAYAVKRGLMAD--RFV 156

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDF 272
            ++++++Y  C     A  +FD + E  VV W+  I A     + +E   +FK +     
Sbjct: 157 LSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGV 216

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
             +E T+++++++ G     + GK +  +  + G +   ++  ALI MY KCG++  AR 
Sbjct: 217 AFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARR 276

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
           +FD +  +D V+W++MI+GY++     +AL +F  M    + PN  TM S+L A +   +
Sbjct: 277 LFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGA 336

Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
           L+    VHS+I +    L   + + L+  Y KC  ++++      +  KN+    AL   
Sbjct: 337 LETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG 396

Query: 453 LVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
           +       EALEL+ ++  +  E    TF  VL AC+    +E+G+  H  ++   Y   
Sbjct: 397 MATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMTQDYGIK 455

Query: 513 IFVE--SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
              E    V+D+  + G I++A +  R +  +  A  W A++   A H
Sbjct: 456 PRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 181/588 (30%), Positives = 311/588 (52%), Gaps = 14/588 (2%)

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+L   L A  +++E   GE IHGF VK     G   ++ ++++ +Y++CG+ ++A++
Sbjct: 40  DNFTLPVALKACGELREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 98

Query: 235 MFDEITEPDVVSWS------ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           MFDE+ +PD+V+WS      E+  +    VE F   + +  +D   +  T+I L+S+   
Sbjct: 99  MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR--RMVMASDVTPDRVTLITLVSACTK 156

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               R G+ +  F  + GF   +S+ N+L++ Y K     +A ++F  +  KD +SW+++
Sbjct: 157 LSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 216

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IA Y +NG   +AL +F  M++    PN  T+  +L+A + +  L+Q  + H   I+ G 
Sbjct: 217 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 276

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + + L+  Y KC +  E+  V S I +K+ V   AL S          ++E +  
Sbjct: 277 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 336

Query: 469 IWGSCREVNGSTFSI-VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           +         +   + VL +C+ +  LEQ K  H   +K  +D + F+ ++++++Y +CG
Sbjct: 337 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCG 396

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVL 586
           ++ +A + F  I       W +++ GY  HG   +    FN M K   VKP+E+T+L++L
Sbjct: 397 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSIL 456

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C HAGL+ E       M + + L P LEHYA +VDLLGRVG L+ A     +MP  P 
Sbjct: 457 SACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT 516

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             I  +LL AC I+ N ++      KL EL+ ++   Y+L+SN+Y   G W +V KLR  
Sbjct: 517 PQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNS 576

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +K++ + K    S I +    H F A D  H + + +Y  L +L  HM
Sbjct: 577 VKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 624



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 242/503 (48%), Gaps = 16/503 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIV 100
           R +  +N L+  L+R  Q    L  F  +     +PD FT    +KACG L+E    E++
Sbjct: 4   RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 63

Query: 101 HGVCLK-LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           HG   K +   S +Y+ S  I  Y K G ++ A   F +    D V +++MV G+  NG 
Sbjct: 64  HGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGS 123

Query: 160 FDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHL 215
             ++ E F  M  +  +  +  +L  ++ A   +   + G  +HGF ++ GF + +   L
Sbjct: 124 PYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS--L 181

Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDF 272
            N+++N Y +     +AV +F  I E DV+SWS  IA         EA  +F D+  +  
Sbjct: 182 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 241

Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
           + N  T++ +L +      L  G++      + G    V +  AL+ MY KC    +A +
Sbjct: 242 EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA 301

Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLIPNGYTMASILEAVSNSK 391
           +F  +  KD VSW ++I+G++ NG  +++++ F  M LE +  P+   M  +L + S   
Sbjct: 302 VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELG 361

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
            L+QA   HS++IK GF  +  + + L+  Y +C +L  + +V + I  K+ V   +L +
Sbjct: 362 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 421

Query: 452 VLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA-RY 509
                    +ALE +  +  S   + N  TF  +L AC+    + +G  I  L +   R 
Sbjct: 422 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRL 481

Query: 510 DQDIFVESAVIDMYCKCGTIEDA 532
             ++   + ++D+  + G ++ A
Sbjct: 482 APNLEHYAVLVDLLGRVGDLDTA 504



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 202/400 (50%), Gaps = 18/400 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL- 72
           D  + ++LI  + K      A R   + +  DI+T+++++SG  +      A++ F R+ 
Sbjct: 76  DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 135

Query: 73  RYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
               + PD  T  +LV AC  L  + +   VHG  ++ GFS+ + LV+  +  YAKS   
Sbjct: 136 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 195

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL--- 186
             A   F+   + D ++++ ++  YV NG   ++  VF +M   G E N  ++  VL   
Sbjct: 196 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 255

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
            A+ D+++G + H   ++ G  + V   ++ A++++Y++C    +A  +F  I   DVVS
Sbjct: 256 AAAHDLEQGRKTHELAIRKGLETEV--KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS 313

Query: 247 WSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           W   I+       A   +E F +   L  N+ + +   M+ +L S      L   K   +
Sbjct: 314 WVALISGFTLNGMAHRSIEEFSIM--LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHS 371

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
           +  K GF     IG +L+ +Y +CG + +A  +F+ +  KD+V W S+I GY  +G   +
Sbjct: 372 YVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTK 431

Query: 361 ALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQV 399
           AL+ F HM++ S + PN  T  SIL A S++  + + +++
Sbjct: 432 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 471



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           + + L I+ G   +  +ST L+  + K      A+        +D++++ ALISG     
Sbjct: 266 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 325

Query: 61  QSGPALKLFD-RLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            +  +++ F   L     RPDA     ++ +C   G L++ +  H   +K GF S  ++ 
Sbjct: 326 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 385

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGL 175
           +  +E Y++ G + +A   F      D V +T+++ GY  +G+  K+ E F  M +S  +
Sbjct: 386 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 445

Query: 176 ELNEFSLTAVLGA 188
           + NE +  ++L A
Sbjct: 446 KPNEVTFLSILSA 458



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 2/164 (1%)

Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
           + K++    N L   L       E L  +  ++    + +  T  + LKAC  + ++  G
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 498 KAIHCLALK-ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
           + IH    K      D++V S++I MY KCG + +A R F ++ +  +  W++M+ G+ +
Sbjct: 61  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120

Query: 557 HGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREAR 599
           +G  ++    F +M     V PD +T + ++++C      R  R
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 164


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 181/588 (30%), Positives = 311/588 (52%), Gaps = 14/588 (2%)

Query: 178 NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           + F+L   L A  +++E   GE IHGF VK     G   ++ ++++ +Y++CG+ ++A++
Sbjct: 59  DNFTLPVALKACGELREVNYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117

Query: 235 MFDEITEPDVVSWS------ERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           MFDE+ +PD+V+WS      E+  +    VE F   + +  +D   +  T+I L+S+   
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR--RMVMASDVTPDRVTLITLVSACTK 175

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
               R G+ +  F  + GF   +S+ N+L++ Y K     +A ++F  +  KD +SW+++
Sbjct: 176 LSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IA Y +NG   +AL +F  M++    PN  T+  +L+A + +  L+Q  + H   I+ G 
Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + + L+  Y KC +  E+  V S I +K+ V   AL S          ++E +  
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355

Query: 469 IWGSCREVNGSTFSI-VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           +         +   + VL +C+ +  LEQ K  H   +K  +D + F+ ++++++Y +CG
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCG 415

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVL 586
           ++ +A + F  I       W +++ GY  HG   +    FN M K   VKP+E+T+L++L
Sbjct: 416 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSIL 475

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           ++C HAGL+ E       M + + L P LEHYA +VDLLGRVG L+ A     +MP  P 
Sbjct: 476 SACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT 535

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKE 706
             I  +LL AC I+ N ++      KL EL+ ++   Y+L+SN+Y   G W +V KLR  
Sbjct: 536 PQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNS 595

Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           +K++ + K    S I +    H F A D  H + + +Y  L +L  HM
Sbjct: 596 VKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 643



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 248/520 (47%), Gaps = 16/520 (3%)

Query: 27  KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
           KF+    A +   +   R +  +N L+  L+R  Q    L  F  +     +PD FT   
Sbjct: 6   KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65

Query: 87  LVKACGSLQE---NEIVHGVCLK-LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
            +KACG L+E    E++HG   K +   S +Y+ S  I  Y K G ++ A   F +    
Sbjct: 66  ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDV---KEGEQI 198
           D V +++MV G+  NG   ++ E F  M  +  +  +  +L  ++ A   +   + G  +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD-- 256
           HGF ++ GF + +   L N+++N Y +     +AV +F  I E DV+SWS  IA      
Sbjct: 186 HGFVIRRGFSNDLS--LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243

Query: 257 -GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              EA  +F D+  +  + N  T++ +L +      L  G++      + G    V +  
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM-LEFSLI 374
           AL+ MY KC    +A ++F  +  KD VSW ++I+G++ NG  +++++ F  M LE +  
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           P+   M  +L + S    L+QA   HS++IK GF  +  + + L+  Y +C +L  + +V
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423

Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTD 493
            + I  K+ V   +L +         +ALE +  +  S   + N  TF  +L AC+    
Sbjct: 424 FNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL 483

Query: 494 LEQGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDA 532
           + +G  I  L +   R   ++   + ++D+  + G ++ A
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 202/400 (50%), Gaps = 18/400 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  + ++LI  + K      A R   + +  DI+T+++++SG  +      A++ F R+ 
Sbjct: 95  DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154

Query: 74  YQG-LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
               + PD  T  +LV AC  L  + +   VHG  ++ GFS+ + LV+  +  YAKS   
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL--- 186
             A   F+   + D ++++ ++  YV NG   ++  VF +M   G E N  ++  VL   
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
            A+ D+++G + H   ++ G  + V   ++ A++++Y++C    +A  +F  I   DVVS
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEV--KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS 332

Query: 247 WSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQA 300
           W   I+       A   +E F +   L  N+ + +   M+ +L S      L   K   +
Sbjct: 333 WVALISGFTLNGMAHRSIEEFSIM--LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHS 390

Query: 301 FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQ 360
           +  K GF     IG +L+ +Y +CG + +A  +F+ +  KD+V W S+I GY  +G   +
Sbjct: 391 YVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTK 450

Query: 361 ALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQV 399
           AL+ F HM++ S + PN  T  SIL A S++  + + +++
Sbjct: 451 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 151/335 (45%), Gaps = 4/335 (1%)

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           DAR +F  +  +    WN+++   S    + + L  F HM      P+ +T+   L+A  
Sbjct: 12  DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
             + +     +H  + K   L  D  + S LI  Y KC  + E+ R+  E++K + V  +
Sbjct: 72  ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131

Query: 448 ALASVLVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
           ++ S         +A+E + R +  S    +  T   ++ AC  +++   G+ +H   ++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191

Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
             +  D+ + +++++ Y K    ++A   F+ I    +  W+ ++  Y Q+G   E   +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251

Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
           FN M   G +P+  T L VL +C  A  + + R     ++   GL  +++    +VD+  
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTALVDMYM 310

Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
           +    E A     ++P   D   W +L+S  T+ G
Sbjct: 311 KCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNG 344



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           + + L I+ G   +  +ST L+  + K      A+        +D++++ ALISG     
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344

Query: 61  QSGPALKLFD-RLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
            +  +++ F   L     RPDA     ++ +C   G L++ +  H   +K GF S  ++ 
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGL 175
           +  +E Y++ G + +A   F      D V +T+++ GY  +G+  K+ E F  M +S  +
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464

Query: 176 ELNEFSLTAVLGA 188
           + NE +  ++L A
Sbjct: 465 KPNEVTFLSILSA 477


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 199/723 (27%), Positives = 367/723 (50%), Gaps = 41/723 (5%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEI 99
           +D +T+  LI    +   S  AL LF  ++ +G+ P    F +++ AC +    L+E   
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +HGV       S  Y+ +  +  Y K   +  A   F        V + AM+  Y     
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVC------N 213
            +++ +VF  M   G++    +   VL A   +K+        ++V  L  +C      +
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKD--------LEVAKLVKLCVEEREHD 233

Query: 214 HLNN-----AIMNLYVRCGQKLDAVKMFDE------ITEPDVVSWSERIAAACDGVEAFG 262
           HL++     A++N Y  CG    A + F        +    +  +++R     D  EA  
Sbjct: 234 HLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQR--ERWD--EALE 289

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
           LFK +     +++    + +L++  G R L  G+ I  F  ++ F   V+ GNALI+MYG
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYG 349

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP-NGYTMA 381
           KCG + +A  +F  +  +D +SWN++IA + ++    +AL +  H+++   +  +  +  
Sbjct: 350 KCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLL-HLMQLDGVKADKISFV 408

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           + L   + S++L +   +HS I++SG   D  + + ++  YG C + +++ RV   +  +
Sbjct: 409 NALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR 468

Query: 442 NAVHINALASVLVYAS---CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           + V  NA+  +  YA+     +EAL L++ +       +  +F   L ACAA   L +GK
Sbjct: 469 DQVSWNAM--ITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK 526

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            +H    +   + ++ V +AV++MY K GT+  A++ F K+    +  WN M+  +AQHG
Sbjct: 527 LLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHG 586

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEH 617
              +V   F +M+  G  P+++T+++V+++C H GLV++  + ++S + D   + P+ EH
Sbjct: 587 HADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEH 646

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDL+ R G L+ A+  I   P+ PD  I  ++L A  ++ +++    +   L+EL 
Sbjct: 647 YYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELT 706

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           PD  + YV+LSNLY   G  ++  K+R+ M EK + KEP +S I V    H F+ GD+++
Sbjct: 707 PDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTN 766

Query: 738 SQS 740
           +++
Sbjct: 767 ART 769



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 277/619 (44%), Gaps = 18/619 (2%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL   + VH    K       ++    +  Y   G ++ A+ CF      D + +  ++ 
Sbjct: 13  SLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIR 72

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFD---VKEGEQIHGFGVKVGFL 208
            +   G+ +++  +F  M+  G+     +  AVLGA S D   ++EG +IH  GV  G  
Sbjct: 73  AHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH--GVLRGTA 130

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFK 265
               ++++  ++++Y +C    DA K+FD I    VV W+  I A        +A  +F 
Sbjct: 131 MESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFY 190

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV---GFMEVVSIGNALISMYG 322
            +     +    T I +L +    + L   K ++  C +      +   S   AL++ YG
Sbjct: 191 AMLLEGVKAERITFIGVLDACSKLKDLEVAKLVK-LCVEEREHDHLHDSSFATALVNFYG 249

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
            CG +  A   F      + +   +MI  Y++   +++AL++F  ML   +  +     +
Sbjct: 250 SCGDLEQAFRAFSRHRL-ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMA 308

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L A S  + L++   +H  + +  F    +  + LI  YGKC +L E+  V   +  ++
Sbjct: 309 VLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRD 368

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +  N + +     S H EAL L   +     + +  +F   L  CA    L +G+ IH 
Sbjct: 369 VISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHS 428

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY-AQHGCYH 561
             +++    D+ +++A++DMY  C + +DA R FR +       WNAM+  Y AQ     
Sbjct: 429 WIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSS 488

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           E   LF +M   G  PD I+++A L++C     + E +     + +  GL   +     +
Sbjct: 489 EALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAV 547

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL-LELQPDN 680
           +++  + G L  A+    +MP+ PD   W  ++SA   +G+ D  L    ++  E +  N
Sbjct: 548 LNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPN 606

Query: 681 ESTYVLLSNLYASAGMWND 699
           + T+V + +  +  G+  D
Sbjct: 607 DVTFVSVVSACSHGGLVKD 625



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 176/379 (46%), Gaps = 6/379 (1%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +LL  V   R L  GK++ A   K        +G+ L+ MY  CG + DA++ FD +  +
Sbjct: 3   DLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQ 62

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS-NSKSLKQAMQV 399
           D+++W  +I  + + G   QAL +F  M    + P      ++L A S + + L++  ++
Sbjct: 63  DALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRI 122

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  +  +    D  + + L+  YGKC+++ ++++V   I  K  V  NA+ +       H
Sbjct: 123 HGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHH 182

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--QDIFVES 517
            +A++++  +     +    TF  VL AC+ + DLE  K +     +  +D   D    +
Sbjct: 183 EQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT 242

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+++ Y  CG +E A RAF +  R  L    AM+  Y Q   + E   LF  M   GVK 
Sbjct: 243 ALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKL 301

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D I  +AVL +C     + E R     M ++      +     ++++ G+ G LE A   
Sbjct: 302 DRIACMAVLNACSGPRGLEEGRIIHGFMREIR-FDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 638 IDQMPIPPDAHIWQSLLSA 656
              M    D   W ++++A
Sbjct: 361 FRSMQ-HRDVISWNTIIAA 378



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +L   A    L+ GK +H    K+  D+  F+   ++ MY  CG++ DAK  F ++ 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAGLVREAR 599
                 W  ++  + Q G   +  +LF  M   GV P    ++AVL +C     L+ E R
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 600 TYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLEGAKMTID 639
                   L G   + +HY    ++ + G+   +E A+   D
Sbjct: 121 RIHGV---LRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFD 159


>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
 gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
          Length = 825

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 194/707 (27%), Positives = 365/707 (51%), Gaps = 23/707 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ L+ ++GH  D IL   L+S +        A R       R++IT+ A+I   A    
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSL 182

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
              A K+F  +  +G + +  T+ +LV+AC     L+   I+H   ++   +    L + 
Sbjct: 183 E-QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNA 241

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            I  Y + G +  A   F   ++ D +A+ A++  Y  +G  +++  ++  M   G + +
Sbjct: 242 LITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPD 301

Query: 179 EFSLTAVLGAS------FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           + +  A+L  S       DVK    +H   V+ G    +   L  A++ +Y +C    D 
Sbjct: 302 KVTFVALLTMSNGPEALTDVK---LVHSHIVESGVSINIA--LGTALVAMYSKCESLEDT 356

Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F+++ + +V+SW+  + A      G +A  + + ++ +  + +  T + LL+   G 
Sbjct: 357 RWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGS 416

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
             L+ G+++  +  +      + + N+L++MYG+CG+V  A  +FD ++ ++ +SW +M+
Sbjct: 417 ADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAML 476

Query: 350 AGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
             YS     + AL +F H +  S + P   T    L+A   +++L +   VHS  ++SG 
Sbjct: 477 TAYSRQNRQDMALLLF-HAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGN 535

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYR 467
             D S+ S L+  YG+C ++ ++K    + + +KN V  +A+ +  V      E L+  R
Sbjct: 536 DTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLR 595

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI-FVESAVIDMYCKC 526
            +     +++ +TF+  L AC+ + DL +GK IH    + R+D +   V ++++ MY KC
Sbjct: 596 FMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKC 655

Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL 586
           G+++ A+  F    R  +  WNA++ GYAQHG   +   LF++M + GV PD +T++ +L
Sbjct: 656 GSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCIL 715

Query: 587 TSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD 646
           + C H GL+ E     + M +L GL P  ++YAC++DLLGR G L+ A+  I  +   P 
Sbjct: 716 SVCSHGGLLDEGVYAYASMVEL-GLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPA 774

Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
                SLLS+C  +G++  G  A   ++E+ P + S +V+LS++Y++
Sbjct: 775 IETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSA 821



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 166/726 (22%), Positives = 319/726 (43%), Gaps = 52/726 (7%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L   LI  + K      A+        +++ T+ A+I   A       A+ L  ++  +G
Sbjct: 37  LGNHLIHTYGKCHSLDDAWETFERMSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEG 96

Query: 77  LRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           ++PD  T  + + +C +   L   +++HG+  + G    + L +  +  Y   G +  A+
Sbjct: 97  VKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAK 156

Query: 134 MCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD- 191
             F D +   NV  +TAM+  +      +++ +VF  M   G + N  +   ++ A    
Sbjct: 157 RVF-DAMPARNVITWTAMIGAHA-ETSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKP 214

Query: 192 --VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
             ++ G  +H   V+    S +   L NA++ +Y RCG+  DA  +F  + E D+++W+ 
Sbjct: 215 EFLEVGIILHMRSVESS--SAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNA 272

Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I          EA  L++ +     + ++ T + LL+   G   L   K + +   + G
Sbjct: 273 LITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESG 332

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
               +++G AL++MY KC  + D R +F+ +  ++ +SWN M+  Y+++G   +A+ +  
Sbjct: 333 VSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITE 392

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           +M    + P+  T   +L   + S  LK   +VH  I +     D  + + L+  YG+C 
Sbjct: 393 YMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCG 452

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            + +++ V   I ++N +   A+ +     +    AL L+  I  S  +    TF   L 
Sbjct: 453 EVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALD 512

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLA 545
           AC     L +G+ +H  A+++  D D+ + SA++ MY +CG+I DAK  F     R +  
Sbjct: 513 ACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHV 572

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W+AM+  + QHG   E       M + G+     T+ + L++C +   +RE +   S +
Sbjct: 573 TWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYV 632

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID-------------------------- 639
            +             +V + G+ G L+ A+   +                          
Sbjct: 633 RERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDA 692

Query: 640 --------QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSN 689
                   Q  + PD   +  +LS C+  G +D G+ A + ++E  L+P  +  Y  + +
Sbjct: 693 VELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEP-TQDNYACVID 751

Query: 690 LYASAG 695
           L   AG
Sbjct: 752 LLGRAG 757



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 158/308 (51%), Gaps = 1/308 (0%)

Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
           + LL +    + L   +++ +   +      V +GN LI  YGKC  ++DA   F+ + +
Sbjct: 4   VRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 63

Query: 340 KDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
           K+  +W ++I   + +   + A+ +   ML   + P+  T+ + L +   S++L     +
Sbjct: 64  KNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLI 123

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  I +SG   D  + + L++ YG C +++++KRV   +  +N +   A+       S  
Sbjct: 124 HGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSLE 183

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
            +A +++R +     + N  T+  +++AC+    LE G  +H  ++++    +  + +A+
Sbjct: 184 -QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNAL 242

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           I MY +CG +EDA+  F  +    +  WNA++  Y QHG   E   L+  M + G KPD+
Sbjct: 243 ITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDK 302

Query: 580 ITYLAVLT 587
           +T++A+LT
Sbjct: 303 VTFVALLT 310


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 190/627 (30%), Positives = 327/627 (52%), Gaps = 24/627 (3%)

Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
           +++S     YA  G I  A   F +      ++Y  ++  YV  G +  +  VF+ M S 
Sbjct: 50  HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109

Query: 174 GLEL--NEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
           G++   + ++   V  A+ ++K    G  +HG  ++  F  G   ++ NA++ +Y+  G+
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWF--GRDKYVQNALLAMYMNFGK 167

Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKD-LRFNDFQINEY------TMIN 281
              A  +FD +   DV+SW+  I+    G    G   D L   D+ +NE       T+++
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMIS----GYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +L   G  + L  G+ +     +    + + + NAL++MY KCG++++AR +FD +  +D
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVH 400
            ++W  MI GY+E+G    AL++ C +++F  + PN  T+AS++    ++  +     +H
Sbjct: 284 VITWTCMINGYTEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
              ++     D  + + LI+ Y KC  ++   RV S   K +    +A+ +  V     +
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL L++ +     E N +T + +L A AA+ DL Q   IHC   K  +   +   + ++
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462

Query: 521 DMYCKCGTIEDAKRAFRKICRD----SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
            +Y KCGT+E A + F  I        +  W A++ GY  HG  H    +F +M + GV 
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522

Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
           P+EIT+ + L +C H+GLV E  T    M + +  + +  HY CIVDLLGR G L+ A  
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582

Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
            I  +P  P + +W +LL+AC  + N+ LG +A +KL EL+P+N   YVLL+N+YA+ G 
Sbjct: 583 LITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642

Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHV 723
           W D+ K+R  M+   L K+PG+S I +
Sbjct: 643 WKDMEKVRSMMENVGLRKKPGHSTIEI 669



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 210/440 (47%), Gaps = 18/440 (4%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRL 72
           D  +   L++ +  F     A R +FD  +NRD+I++N +ISG  R      AL +FD +
Sbjct: 151 DKYVQNALLAMYMNFGKVEMA-RDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209

Query: 73  RYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
             + +  D  T  S++  CG L++ E+   VH +  +     ++ + +  +  Y K G +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269

Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF---SLTAVL 186
             A   F      D + +T M+ GY  +G+ + + E+   M+  G+  N     SL +V 
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329

Query: 187 GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           G +  V +G+ +HG+ V+    S +   +  +++++Y +C +     ++F   ++     
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDII--IETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387

Query: 247 WSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           WS  IA         +A GLFK +R  D + N  T+ +LL +      LR    I  +  
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL----IFKDSVSWNSMIAGYSENGFFN 359
           K GFM  +     L+ +Y KCG +  A  IF+ +      KD V W ++I+GY  +G  +
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507

Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCL 418
            AL +F  M+   + PN  T  S L A S+S  +++ + +   +++    L   +  +C+
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567

Query: 419 ITTYGKCNALNESKRVLSEI 438
           +   G+   L+E+  +++ I
Sbjct: 568 VDLLGRAGRLDEAYNLITTI 587



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 254/544 (46%), Gaps = 28/544 (5%)

Query: 36  RFLFDTQNRD-IITYNALISGLARFCQSGPALKLFDRLRYQGLR--PDAFTFSSLVKACG 92
           R LF+   +  +++YN +I    R      A+ +F R+  +G++  PD +T+  + KA G
Sbjct: 69  RKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAG 128

Query: 93  SLQENE---IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
            L+  +   +VHG  L+  F    Y+ +  +  Y   G++  A   F    + D +++  
Sbjct: 129 ELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNT 188

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVG 206
           M+ GY  NG  + +  +F  M +  ++L+  ++ ++L   G   D++ G  +H    +  
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGL 263
               +   + NA++N+Y++CG+  +A  +FD +   DV++W+  I       D   A  L
Sbjct: 249 LGDKI--EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
            + ++F   + N  T+ +L+S  G    +  GK +  +  +      + I  +LISMY K
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAK 366

Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
           C +V+    +F       +  W+++IAG  +N   + AL +F  M    + PN  T+ S+
Sbjct: 367 CKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSL 426

Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
           L A +    L+QAM +H ++ K+GF+      + L+  Y KC  L  + ++ + I +K+ 
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486

Query: 444 VHINALASVLVYA-SCHAE---ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
                L   L+     H +   AL+++  +  S    N  TF+  L AC+    +E+G  
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546

Query: 500 IHCLALK-----ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMG 553
           +    L+     AR +      + ++D+  + G +++A      I  +  +  W A++  
Sbjct: 547 LFRFMLEHYKTLARSNH----YTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602

Query: 554 YAQH 557
              H
Sbjct: 603 CVTH 606



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 225/490 (45%), Gaps = 12/490 (2%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           SL     A+  + + + +H   +  G +SG   H+ + +   Y  CG    A K+F+E+ 
Sbjct: 20  SLLNHFAATQSISKTKALHCHVITGGRVSG---HILSTLSVTYALCGHITYARKLFEEMP 76

Query: 241 EPDVVSWSERIAAAC-DGV--EAFGLFKDLRFNDFQ--INEYTMINLLSSVGGERILRAG 295
           +  ++S++  I     +G+  +A  +F  +     +   + YT   +  + G  + ++ G
Sbjct: 77  QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
             +     +  F     + NAL++MY   G+V  AR +FD +  +D +SWN+MI+GY  N
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G+ N AL MF  M+  S+  +  T+ S+L    + K L+    VH  + +        + 
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y KC  ++E++ V   +++++ +    + +          ALEL R +      
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
            N  T + ++  C     +  GK +H  A++ +   DI +E+++I MY KC  ++   R 
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376

Query: 536 FRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLV 595
           F    +     W+A++ G  Q+    +   LF +M +  V+P+  T  ++L +      +
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436

Query: 596 REARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT---IDQMPIPPDAHIWQS 652
           R+A   + C     G +  L+    +V +  + G LE A      I +     D  +W +
Sbjct: 437 RQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGA 495

Query: 653 LLSACTIYGN 662
           L+S   ++G+
Sbjct: 496 LISGYGMHGD 505


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 183/555 (32%), Positives = 297/555 (53%), Gaps = 40/555 (7%)

Query: 240 TEPDVVSWSERIAAACDGV----------EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
           T P   S S   A+  D +          EA   + ++  +  + + +    +L +V G 
Sbjct: 46  TPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGL 105

Query: 290 RILRAGKQIQAFCYKVGF-MEVVSIGNALISMYGKCG--------------------QVN 328
           + L+ G+QI A   K G+    V++ N L++MYGKCG                    +V+
Sbjct: 106 QDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVD 165

Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
           D++++F+  + +D VSWN+MI+ +S++  F++AL  F  M+   +  +G T+AS+L A S
Sbjct: 166 DSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACS 225

Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
           + + L    ++H++++++  L+++S + S L+  Y  C  +   +RV   I  +     N
Sbjct: 226 HLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWN 285

Query: 448 ALASVLVYASCHAEALELY-RTIWGSCREVNGSTFSIVLKACA-AMTDLEQGKAIHCLAL 505
           A+ S         +AL L+   I  +    N +T + V+ AC  ++  + +GK IH  A+
Sbjct: 286 AMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAI 345

Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
           +     DI V SA++DMY KCG +  ++R F ++   ++  WN ++M    HG   E   
Sbjct: 346 RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALE 405

Query: 566 LFNKM-SKFG----VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
           LF  M ++ G     KP+E+T++ V  +C H+GL+ E       M   HG+ P  +HYAC
Sbjct: 406 LFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYAC 465

Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPD-AHIWQSLLSACTIYGNIDLGLLAGSKLLELQPD 679
           +VDLLGR G LE A   ++ MP   D    W SLL AC I+ N++LG +A   LL L+P+
Sbjct: 466 VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN 525

Query: 680 NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQ 739
             S YVLLSN+Y+SAG+WN   ++RK M++  + KEPG SWI      H F AGD SH Q
Sbjct: 526 VASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQ 585

Query: 740 SKEIYKELIKLYEHM 754
           S++++  L  L E M
Sbjct: 586 SEQLHGFLETLSEKM 600



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 212/436 (48%), Gaps = 46/436 (10%)

Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSG--- 210
           + +F ++   ++EM   G   + F+  AVL A     D+K GEQIH   VK G+ S    
Sbjct: 70  SNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVT 129

Query: 211 VCNHL----------------NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
           V N L                NNA+M +Y + G+  D+  +F+   + D+VSW+  I++ 
Sbjct: 130 VANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSF 189

Query: 255 CDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEV 310
                  EA   F+ +     +++  T+ ++L +      L  GK+I A+  +    +E 
Sbjct: 190 SQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIEN 249

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             +G+AL+ MY  C QV   R +FD+++ +    WN+MI+GY+ NG   +AL +F  M++
Sbjct: 250 SFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK 309

Query: 371 FS-LIPNGYTMASILEAVSNS-KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
            + L+PN  TMAS++ A  +S  ++ +  ++H++ I++    D ++ S L+  Y KC  L
Sbjct: 310 VAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCL 369

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI-----WGSCREVNGSTFSI 483
           N S+RV +E+  KN +  N L           EALEL++ +      G   + N  TF  
Sbjct: 370 NLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFIT 429

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA------VIDMYCKCGTIEDAKRAFR 537
           V  AC+    + +G     L L  R   D  VE        V+D+  + G +E+A     
Sbjct: 430 VFAACSHSGLISEG-----LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVN 484

Query: 538 KICR--DSLAGWNAMM 551
            +    D +  W++++
Sbjct: 485 TMPAEFDKVGAWSSLL 500



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 197/426 (46%), Gaps = 53/426 (12%)

Query: 65  ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIE 121
           A+  +  +   G RPD F F +++KA   LQ+    E +H   +K G+ S    V+  + 
Sbjct: 76  AISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLV 135

Query: 122 N---------------------YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF 160
           N                     YAK G +  ++  F   +D D V++  M+  +  +  F
Sbjct: 136 NMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRF 195

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNH-LN 216
            ++   F  M   G+EL+  ++ +VL A   ++    G++IH + ++   L  + N  + 
Sbjct: 196 SEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDL--IENSFVG 253

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDL-RFNDF 272
           +A++++Y  C Q     ++FD I    +  W+  I+  A +G++  A  LF ++ +    
Sbjct: 254 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 313

Query: 273 QINEYTMINLLSS-VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
             N  TM +++ + V     +  GK+I A+  +      +++G+AL+ MY KCG +N +R
Sbjct: 314 LPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSR 373

Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-----LIPNGYTMASILEA 386
            +F+ +  K+ ++WN +I     +G   +AL++F +M+  +       PN  T  ++  A
Sbjct: 374 RVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAA 433

Query: 387 VSNSKSLKQAMQV-----HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL----SE 437
            S+S  + + + +     H H    G        +C++   G+   L E+  ++    +E
Sbjct: 434 CSHSGLISEGLNLFYRMKHDH----GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAE 489

Query: 438 IDKKNA 443
            DK  A
Sbjct: 490 FDKVGA 495



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 158/329 (48%), Gaps = 22/329 (6%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--- 99
           +RD++++N +IS  ++  +   AL  F  +  +G+  D  T +S++ AC  L+  ++   
Sbjct: 176 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 235

Query: 100 VHGVCLKLG-FSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG 158
           +H   L+        ++ S  ++ Y    ++ S    F   L      + AM+ GY  NG
Sbjct: 236 IHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNG 295

Query: 159 EFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFD----VKEGEQIHGFGVKVGFLSGVCN 213
             +K+  +F+EM +  GL  N  ++ +V+ A       + +G++IH + ++    S +  
Sbjct: 296 LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT- 354

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA---CDGVEAFGLFKDL--- 267
            + +A++++Y +CG    + ++F+E+   +V++W+  I A      G EA  LFK++   
Sbjct: 355 -VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAE 413

Query: 268 --RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKC 324
             R  + + NE T I + ++     ++  G  +         +E  S   A ++ + G+ 
Sbjct: 414 AGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRA 473

Query: 325 GQVNDARSIFDYLI--FKDSVSWNSMIAG 351
           GQ+ +A  + + +   F    +W+S++  
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGA 502


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 178/544 (32%), Positives = 286/544 (52%), Gaps = 13/544 (2%)

Query: 225 RCGQKLDAVKMFDE-ITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMI 280
           R  ++ +   +F+  + + DV SW+  IA    + D  EA   F  +R         +  
Sbjct: 21  RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFP 80

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
             + +      + +GKQ     +  G+   + + +ALI MY  CG++ DAR +FD +  +
Sbjct: 81  CAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHML------EFSLIPNGYTMASILEAVSNSKSLK 394
           + VSW SMI GY  NG    A+ +F  +L      + ++  +   M S++ A S   +  
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKG 200

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCN--ALNESKRVLSEIDKKNAVHINALASV 452
               +HS +IK GF    S+ + L+  Y K     +  ++++  +I  K+ V  N++ SV
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260

Query: 453 LVYASCHAEALELYRT-IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
              +    EA +++R  I       N  T S VL A +    L  GK IH   ++   + 
Sbjct: 261 YAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
           D+ V +++IDMYCKCG +E A+ AF ++   ++  W AM+ GY  HG   +   LF  M 
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380

Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
             GV+P+ IT+++VL +C HAGL      + + M    G+ P LEHY C+VDLLGR G L
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440

Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
           + A   I +M + PD+ IW SLL+AC I+ N++L  ++ ++L EL P N   Y+LLS++Y
Sbjct: 441 QKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIY 500

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
           A +G W DV ++R  MK + L K PG+S + + G  H F  GD  H Q ++IY+ L +L 
Sbjct: 501 ADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560

Query: 752 EHMV 755
             ++
Sbjct: 561 RKLL 564



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 186/364 (51%), Gaps = 20/364 (5%)

Query: 45  DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVH 101
           D+ ++N++I+ LAR   S  AL+ F  +R   L P   +F   +KAC SL +    +  H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99

Query: 102 GVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD 161
                 G+ S +++ S  I  Y+  G++  A   F +    + V++T+M+ GY  NG   
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 162 KSKEVFVEM------RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVC 212
            +  +F ++          + L+   + +V+ A   V      E IH F +K GF  GV 
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219

Query: 213 NHLNNAIMNLYVRCGQKLDAV--KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
             + N +++ Y + G+   AV  K+FD+I + D VS++  ++  A  G+  EAF +F+ L
Sbjct: 220 --VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRL 277

Query: 268 -RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
            +      N  T+  +L +V     LR GK I     ++G  + V +G ++I MY KCG+
Sbjct: 278 IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337

Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
           V  AR  FD +  K+  SW +MIAGY  +G   +AL++F  M++  + PN  T  S+L A
Sbjct: 338 VETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397

Query: 387 VSNS 390
            S++
Sbjct: 398 CSHA 401



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 29/271 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAF-RFLFDT-QNRDIITYNALISGLARF 59
           I+S +IK G      +  TL+  + K  +   A  R +FD   ++D ++YN+++S  A+ 
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264

Query: 60  CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
             S  A  +F RL + + +  +  T S+++ A    G+L+  + +H   +++G    V +
Sbjct: 265 GMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  I+ Y K G + +A + F    + +  ++TAM+ GY  +G   K+ E+F  M   G+
Sbjct: 325 GTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 176 ELNEFSLTAVLGAS------------FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
             N  +  +VL A             F+  +G     FGV+ G     C      +++L 
Sbjct: 385 RPNYITFVSVLAACSHAGLHDVGWHWFNAMKGR----FGVEPGLEHYGC------MVDLL 434

Query: 224 VRCGQKLDAVKMFDEIT-EPDVVSWSERIAA 253
            R G    A  +  ++  EPD + WS  +AA
Sbjct: 435 GRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA 465


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 186/569 (32%), Positives = 303/569 (53%), Gaps = 20/569 (3%)

Query: 193 KEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYV--RCGQKLDAVKMFDEITEPDVVSWS 248
           +E  Q+H   +K   L    NH  +++ ++ LY   R      A  +FD I EP +VSW+
Sbjct: 29  REANQLHALSIKTASL----NHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWN 84

Query: 249 ERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV 305
             I    +     +A  LF  L   DF  + +T+  +L        L+ GKQI     K+
Sbjct: 85  LLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKI 143

Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
           GF     + ++L+SMY KCG++   R +FD +  KD VSWNS+I GY+  G    AL+MF
Sbjct: 144 GFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMF 203

Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
             M E     + ++   +++ +S S  L+ A  V   +     + +    + +I  Y K 
Sbjct: 204 EEMPE----KDSFSWTILIDGLSKSGKLEAARDVFDRMP----IRNSVSWNAMINGYMKA 255

Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
              N +K +  ++ +++ V  N++ +         +AL+L+  +       N +T    +
Sbjct: 256 GDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAV 315

Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
            A + M  L  G+ +H   +K+ +  D  + + +I+MY KCG+++ A R FR I +  L 
Sbjct: 316 SAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLG 375

Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
            W ++++G   HG   +   LF++M + G+KP  IT++ VL +C HAG   +A  Y   M
Sbjct: 376 HWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMM 435

Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
           +  +G+ P +EHY C++D+L R G LE AK TI++MPI  +  IW SLLS    +GNI +
Sbjct: 436 TYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRM 495

Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
           G  A   L++L PD    YV+LSN+YA+AG+W  V ++R+ MK+K + K+PG S I   G
Sbjct: 496 GEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQG 555

Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
             H F  GD SH Q++EIY +L ++ + +
Sbjct: 556 SIHEFIVGDKSHPQTEEIYIKLCEMKKKL 584



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 211/465 (45%), Gaps = 26/465 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHF--TKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
           Q+++L IK      P +S+ L++ +   +  + + A       Q   ++++N LI     
Sbjct: 33  QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYL 115
             +S  A+ LF +L      PD+FT   ++K C   G+LQE + +HG+ LK+GF    ++
Sbjct: 93  NQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           +S  +  Y+K GEI      F    D D V++ +++ GY   GE + + E+F EM     
Sbjct: 152 LSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMP---- 207

Query: 176 ELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E + FS T ++       + E       ++   + V     NA++N Y++ G    A ++
Sbjct: 208 EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVS---WNAMINGYMKAGDSNTAKEL 264

Query: 236 FDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           FD++ E  +V+W+  I          +A  LF+ +   D   N  T++  +S+  G   L
Sbjct: 265 FDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSL 324

Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
             G+ + ++  K GF     +G  LI MY KCG V  A  +F  +  K    W S+I G 
Sbjct: 325 GTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGL 384

Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-----MQVHSHIIKSG 407
             +G   Q L++F  M    L P+  T   +L A S++   + A     M  + + IK  
Sbjct: 385 GMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPS 444

Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALAS 451
                    CLI    +   L E+K  +  +  K N V   +L S
Sbjct: 445 I----EHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLS 485


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 179/574 (31%), Positives = 303/574 (52%), Gaps = 17/574 (2%)

Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACD 256
           +HG   K G  +G    +  +++N Y+RCG   DA ++FD + E +VV+W+  +     +
Sbjct: 100 VHGHMAKTG--AGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLN 157

Query: 257 GVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
              A GL  F ++       + YT+   L++      +  GKQ+  +  K G   + S+G
Sbjct: 158 SQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMG 217

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG-FFNQALDMFCHMLEFSL 373
           N+L S+Y K G ++ A   F  +  K+ ++W +MI+  +E+       L +F  ML   +
Sbjct: 218 NSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGV 277

Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
           +PN +T+ S++        L    QV +   K G   +  + +  +  Y +    +E+ R
Sbjct: 278 MPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMR 337

Query: 434 VLSEIDKKNAVHINALAS-----------VLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           +  +++  + +  NA+ S            L   S   +AL ++R +  S  + +  TFS
Sbjct: 338 LFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFS 397

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            +L  C+AM  LEQG+ IH   +K+ +  D+ V SA+++MY KCG I+DA +AF ++   
Sbjct: 398 SILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 457

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
           +   W +M+ GY+QHG   E   LF +M   GV+P+EIT++++L++C +AGLV EA  Y 
Sbjct: 458 TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYF 517

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             M   + + P ++HY C++D+  R+G +E A   I +    P+  IW SL++ C  +GN
Sbjct: 518 DMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGN 577

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
           ++L   A  KLLEL+P    TY+LL N+Y S   W DV ++RK MK++ +      SWI 
Sbjct: 578 MELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWIT 637

Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
           +    + F A D +H Q+ E+Y+ L  L E   A
Sbjct: 638 IKDKVYFFRANDRTHPQATELYQLLENLLEKAKA 671



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 243/490 (49%), Gaps = 28/490 (5%)

Query: 92  GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
           GSL     VHG   K G  + +++ +  +  Y + G    A   F    + + V +TA+V
Sbjct: 92  GSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALV 151

Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG---ASFDVKEGEQIHGFGVKVGFL 208
            GY  N +     EVFVEM  +G   + ++L A L    AS DV  G+Q+HG+ +K G  
Sbjct: 152 TGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAE 211

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE----AFGLF 264
           S     + N++ +LY + G    A++ F  I E +V++W+  I+A  +  E       LF
Sbjct: 212 S--ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLF 269

Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC 324
            D+  +    NE+T+ +++S  G    L  GKQ+QAF +K+G    + + N+ + +Y + 
Sbjct: 270 IDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRK 329

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSE-------------NGFFNQALDMFCHMLEF 371
           G+ ++A  +F+ +     ++WN+MI+GY++              GF  QAL +F  +   
Sbjct: 330 GETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRS 387

Query: 372 SLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
            + P+ +T +SIL   S   +L+Q  Q+H+  IKSGFL D  + S L+  Y KC  + ++
Sbjct: 388 VMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDA 447

Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
            +   E+  +  V   ++ S         EA++L+  +  +    N  TF  +L AC+  
Sbjct: 448 NKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYA 507

Query: 492 TDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWN 548
             +E+ +    + +K  Y  +  V+    +IDM+ + G +EDA    ++     + A W+
Sbjct: 508 GLVEEAEHYFDM-MKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWS 566

Query: 549 AMMMGYAQHG 558
           +++ G   HG
Sbjct: 567 SLVAGCRSHG 576



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 210/416 (50%), Gaps = 23/416 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++  + K G   D  ++T+L++ + +    R A R       R+++T+ AL++G     Q
Sbjct: 100 VHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
               L++F  +   G  P  +T  + + AC +  + ++   VHG  +K G  S   + + 
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE-FDKSKEVFVEMRSLGLEL 177
               YAK G + SA   F    + + + +T M+     + E  +    +F++M   G+  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMP 279

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           NEF+LT+V+   G   D+  G+Q+  F  K+G  + +   + N+ M LY+R G+  +A++
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL--PVKNSTMYLYLRKGETDEAMR 337

Query: 235 MFDEITEPDVVSWSERIA--------------AACDGVEAFGLFKDLRFNDFQINEYTMI 280
           +F+++ +  +++W+  I+              A   G +A  +F+DL+ +  + + +T  
Sbjct: 338 LFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFS 397

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           ++LS       L  G+QI A   K GF+  V + +AL++MY KCG + DA   F  +  +
Sbjct: 398 SILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTR 457

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA 396
             V+W SMI+GYS++G   +A+ +F  M    + PN  T  S+L A S +  +++A
Sbjct: 458 TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEA 513



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 198/439 (45%), Gaps = 18/439 (4%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L A + +     K G    + +  +L++ Y +CG   DAR +FD +  ++ V+W +++ G
Sbjct: 94  LGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTG 153

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y+ N      L++F  MLE    P+ YT+ + L A   S  +    QVH + IK G    
Sbjct: 154 YTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESI 213

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY-ASCHAEALELYRTIW 470
            SM + L + Y K  +L+ + R    I +KN +    + S       C    L L+  + 
Sbjct: 214 TSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDML 273

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
                 N  T + V+  C    DL  GK +   + K   + ++ V+++ + +Y + G  +
Sbjct: 274 MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETD 333

Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQ-----------HGCYHEVSNLFNKMSKFGVKPDE 579
           +A R F ++   S+  WNAM+ GYAQ                +   +F  + +  +KPD 
Sbjct: 334 EAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDL 393

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
            T+ ++L S C A +  E    +   +   G +  +   + +V++  + G ++ A     
Sbjct: 394 FTFSSIL-SVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFL 452

Query: 640 QMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
           +MP       W S++S  + +G     + L    +L  ++P NE T+V L +  + AG+ 
Sbjct: 453 EMPTRTFV-TWTSMISGYSQHGQPQEAIQLFEEMRLAGVRP-NEITFVSLLSACSYAGLV 510

Query: 698 NDVGKLRKEMKEKFLCKEP 716
            +       MK+++ C EP
Sbjct: 511 EEAEHYFDMMKKEY-CIEP 528



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)

Query: 15  PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP---------- 64
           P+ ++T+  +  K  +   A R     ++  IIT+NA+ISG A+   S            
Sbjct: 317 PVKNSTMYLYLRK-GETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF 375

Query: 65  -ALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFI 120
            AL +F  L+   ++PD FTFSS++  C +   L++ E +H   +K GF S V + S  +
Sbjct: 376 QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALV 435

Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
             Y K G I  A   F +      V +T+M+ GY  +G+  ++ ++F EMR  G+  NE 
Sbjct: 436 NMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI 495

Query: 181 SLTAVLGA-SFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
           +  ++L A S+   V+E E       K   +  V +H    +++++VR G+  DA     
Sbjct: 496 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHY-GCMIDMFVRLGRVEDAFSFIK 554

Query: 238 EIT-EPDVVSWSERIA 252
               EP+   WS  +A
Sbjct: 555 RTGFEPNEAIWSSLVA 570



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 1/199 (0%)

Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
           SL  A  VH H+ K+G   D  + + L+  Y +C A  +++R+   + ++N V   AL +
Sbjct: 93  SLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVT 152

Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
                S  A  LE++  +    R  +  T    L AC A  D++ GK +H  A+K   + 
Sbjct: 153 GYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 212

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ-HGCYHEVSNLFNKM 570
              + +++  +Y K G+++ A RAF +I   ++  W  M+   A+   C     +LF  M
Sbjct: 213 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDM 272

Query: 571 SKFGVKPDEITYLAVLTSC 589
              GV P+E T  +V++ C
Sbjct: 273 LMDGVMPNEFTLTSVMSLC 291



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  IK+G   D ++++ L++ + K    + A +   +   R  +T+ ++ISG ++  
Sbjct: 414 QIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHG 473

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENE 98
           Q   A++LF+ +R  G+RP+  TF SL+ AC   G ++E E
Sbjct: 474 QPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAE 514



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 8/193 (4%)

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
           T+    + V  + +  +L  C  M  L   +A+H    K     D+FV +++++ Y +CG
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCG 127

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
              DA+R F  +   ++  W A++ GY  +        +F +M + G  P   T  A L 
Sbjct: 128 AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 187

Query: 588 SC---CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
           +C   C   L ++   Y    +  +G          +  L  ++G L+ A     ++P  
Sbjct: 188 ACLASCDVDLGKQVHGY----AIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-E 242

Query: 645 PDAHIWQSLLSAC 657
            +   W +++SAC
Sbjct: 243 KNVITWTTMISAC 255


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 201/628 (32%), Positives = 331/628 (52%), Gaps = 37/628 (5%)

Query: 167 FVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F  M++  +  N F+  A+L A   ++      Q+H +  ++G  +        A+++ Y
Sbjct: 40  FTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAAD--RFSAAALVDAY 97

Query: 224 VRCGQKLDAVKMFDEITEP--DVVSWSERIAA-ACDGV--EAFGLFKDLRF-NDFQINEY 277
            +CG    A ++FDE+ E   DVVSW+  I+A + +G   EAF  F  +R+   +  +E 
Sbjct: 98  GKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSEC 157

Query: 278 TMINLLS--------SVG-GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN 328
             ++++S        +VG G   LR G  +     K GF     +GN+++ MY  C  V 
Sbjct: 158 CGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVG 217

Query: 329 DARSIFDYLIF--KDSVSWNSMIAGYSENGFFNQALDMFCHMLE---FSLIPNGYTMASI 383
            A  +F+ +    +D VSWNS+I+G+  NG   +AL  F  M+     ++ PN  T+ ++
Sbjct: 218 GAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIAL 277

Query: 384 LEAVSNSKSLKQAMQVHSHIIK--SGFLL--DDSMISCLITTYGKCNALNESKRVLSEID 439
           L++ +    ++ +  VH +I    S  L+  D  +++ L+  + +C  L  ++ +   ++
Sbjct: 278 LKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVE 337

Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIW------GSCREVNGSTFSIVLKACAAMTD 493
            KN V  +A+ +     SC  EAL L+R +       G   + N  T   V+ AC+ +  
Sbjct: 338 GKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGA 397

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI--CRDSLAGWNAMM 551
                 IH  A+    DQD  + SA+IDM  KCG IE  ++ F ++     ++  W++M+
Sbjct: 398 SRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMI 457

Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
                HG       LF++M   G +P+EITY++VL++C HAGLV + ++  + M   +G+
Sbjct: 458 GAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGM 517

Query: 612 IPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGS 671
            P  +HYAC+VDLLGR G L+ A   I  MPI  D  +W SLL+AC ++GN  LG +   
Sbjct: 518 SPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEK 577

Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
           K+L L  ++   +VLL+N+Y  AG W+DV ++R E++   L K PG S+I +G   + F 
Sbjct: 578 KILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFM 637

Query: 732 AGDSSHSQSKEIYKELIKLYEHMVATAK 759
           A D SH +S+ IYKEL  L E +   AK
Sbjct: 638 AEDRSHPESEMIYKELDGLDERVRKAAK 665



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 266/562 (47%), Gaps = 53/562 (9%)

Query: 42  QNRDIITYNALISGLARFCQSGP--ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--- 96
            ++D   +N+LI   A+     P  AL  F R++   +  + FTF +L+KAC +L+    
Sbjct: 14  SHKDTFHWNSLI---AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 97  NEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD--LDNVAYTAMVCGY 154
              VH    +LG ++  +  +  ++ Y K G    A   F +  +  +D V++TA++  Y
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 155 VWNGEFDKSKEVFVEMRSL-GLELNE------FSLTAVLGA------SFDVKEGEQIHGF 201
             NG  D++   F  MR + G + +E       SL A++ A      S  ++ G  +HG 
Sbjct: 131 SSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--EITEPDVVSWSERIAA---ACD 256
            VK GF  GV  HL N+++++Y  C     A ++F+   I + DVVSW+  I+      +
Sbjct: 191 VVKYGF--GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGE 248

Query: 257 GVEAFGLFKDL---RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC----YKVGFME 309
              A   F+D+     +  + N  T+I LL S      +     +  +       +   +
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308

Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
            V +  AL+ M+ +CG +  AR IFD +  K+ V W++MIAGY +     +AL +F  ML
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQML 368

Query: 370 -EFSLI-----PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            E +++     PN  T+ S++ A S   + + A  +H + + +G   D  + S LI    
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCA 428

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---ALELYRTIWGSCREVNGST 480
           KC  +   ++V SE+D+     + + +S++     H E   ALEL+  +     E N  T
Sbjct: 429 KCGDIEHGRQVFSEMDESTRT-VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEIT 487

Query: 481 FSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGTIEDAKRAFR 537
           +  VL AC+    +EQGK+  C  +++  Y      +  + ++D+  + G +++A     
Sbjct: 488 YISVLSACSHAGLVEQGKS--CFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVIL 545

Query: 538 KI-CRDSLAGWNAMMMGYAQHG 558
            +  +  LA W +++     HG
Sbjct: 546 NMPIKADLALWGSLLAACHLHG 567



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 216/498 (43%), Gaps = 50/498 (10%)

Query: 239 ITEPDVVSWSERIA--AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGK 296
           I+  D   W+  IA  A  +   A   F  ++ +    N +T   LL +    R L    
Sbjct: 13  ISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTL 72

Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK--DSVSWNSMIAGYSE 354
           Q+ A+  ++G         AL+  YGKCG    A  +FD +     D VSW ++I+ YS 
Sbjct: 73  QVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSS 132

Query: 355 NGFFNQALDMFCHMLEFSLIPN----GYTMASILEAVS------NSKSLKQAMQVHSHII 404
           NG  ++A   F  M            G  + S+   VS       S  L++   VH  ++
Sbjct: 133 NGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVV 192

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYASCHAEA 462
           K GF +   + + ++  Y  C  +  + RV +   I++++ V  N+L S          A
Sbjct: 193 KYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERA 252

Query: 463 LELYRTIWG---SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD-----QDIF 514
           L  +  +     S  E N  T   +LK+CA +  +E    +H   + +R+      +D+ 
Sbjct: 253 LRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVH-EYISSRHSSLLVAKDVV 311

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           V +A++DM+ +CG +  A+  F  +   ++  W+AM+ GY Q  C  E   LF +M   G
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEG 371

Query: 575 ------VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRV 628
                 VKP+ +T ++V+ +C   G  R A + +   +   GL       + ++D+  + 
Sbjct: 372 NMVGVEVKPNAVTLVSVIAACSRLGASRSA-SMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 629 GLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYGNIDLGLLAGSKLLEL---------QP 678
           G +E  +    +M       + W S++ A  I+G        G + LEL         +P
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE-------GKRALELFSEMRTGGYEP 483

Query: 679 DNESTYVLLSNLYASAGM 696
            NE TY+ + +  + AG+
Sbjct: 484 -NEITYISVLSACSHAGL 500



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 175/380 (46%), Gaps = 36/380 (9%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARF 59
           ++ L++K G  +   L  +++  ++   D   A+R       + RD++++N+LISG    
Sbjct: 187 VHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLN 246

Query: 60  CQSGPALKLFDRLRYQG---LRPDAFTFSSLVKAC---GSLQENEIVHGVC----LKLGF 109
            ++  AL+ F+ +  +G   + P+  T  +L+K+C   G ++ +  VH         L  
Sbjct: 247 GEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLV 306

Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVE 169
           +  V +++  ++ +A+ G +  A   F      + V ++AM+ GY      +++  +F +
Sbjct: 307 AKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQ 366

Query: 170 M----RSLGLELNEFSLTAV--------LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN 217
           M      +G+E+   ++T V        LGAS   +    IH + V  G        + +
Sbjct: 367 MLMEGNMVGVEVKPNAVTLVSVIAACSRLGAS---RSASMIHKYAVATGLDQDA--RIAS 421

Query: 218 AIMNLYVRCGQKLDAVKMFDEITEP--DVVSWSERIAAA---CDGVEAFGLFKDLRFNDF 272
           A++++  +CG      ++F E+ E    VVSWS  I A     +G  A  LF ++R   +
Sbjct: 422 ALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGY 481

Query: 273 QINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
           + NE T I++LS+     ++  GK    +     G          L+ + G+ G +++A 
Sbjct: 482 EPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAH 541

Query: 332 S-IFDYLIFKDSVSWNSMIA 350
           + I +  I  D   W S++A
Sbjct: 542 NVILNMPIKADLALWGSLLA 561


>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
 gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 174/532 (32%), Positives = 292/532 (54%), Gaps = 9/532 (1%)

Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI--- 251
           G Q H   +K+GF+S V  ++ +A++++Y +CG+   A  +FD++ +  VV+W+  I   
Sbjct: 88  GIQAHSTILKLGFISNV--YICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGY 145

Query: 252 -AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
            A  C  + A  LF  +      ++ +++ + L+          G Q+     K G    
Sbjct: 146 LAVNCPKI-AIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYN 204

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           V +G +L+ MY KCG V+D+R +FD+++ ++ ++W SM+ GYS+    ++A+ +   M+ 
Sbjct: 205 VVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVL 264

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA-LN 429
             L PN  T  S+L + S    L   +QVH  II+ G   +  + + L+T Y KC++ L 
Sbjct: 265 QDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLE 324

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           + K+V S +   + +  NA+ +       H EAL  +  +  +  +++  T + V+ A  
Sbjct: 325 DFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIG 384

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
             + LE+GKA+H L  +  Y   + V++ ++ MY +CG I D+KR F  +    +  WNA
Sbjct: 385 NSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNA 444

Query: 550 MMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
           ++  +A HG   E   LF +M K  +KP+  T+LAVL +C H G V +   Y   M    
Sbjct: 445 LLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDI 504

Query: 610 GLIP-QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
            L P ++EHYA +VD  GR G L  A+  I+ MPI P   ++++LLSA  ++GN ++   
Sbjct: 505 LLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAAR 564

Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSW 720
           +  KLLEL P++ +TYVLLS++    G W+D   LRK M ++ L K+PGYSW
Sbjct: 565 SAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRGLRKKPGYSW 616



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 224/440 (50%), Gaps = 12/440 (2%)

Query: 68  LFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYA 124
           L       G   + +  + +V  C   GS       H   LKLGF S VY+ S  ++ YA
Sbjct: 56  LIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYA 115

Query: 125 KSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTA 184
           K GEI SA + F        V + +++ GY+       + E+F++M    + ++ FS+++
Sbjct: 116 KCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSS 175

Query: 185 VLG--ASFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
            L   +  + +E G Q+HG  +K G    V   +  +++++Y +CG   D+  +FD +  
Sbjct: 176 CLAGCSQLEAREVGTQVHGLILKTGLGYNVV--VGTSLVDMYSKCGDVDDSRLVFDHMVN 233

Query: 242 PDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
            +V++W+  +          EA  L K++   D + N  T  +LLSS  G   L    Q+
Sbjct: 234 RNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQV 293

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKC-GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
                ++G    V I   L+++Y KC   + D + +   ++  D+++WN++IAGYS+ G 
Sbjct: 294 HCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGR 353

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +AL  F  M +  +  + YT+ S++ A+ NS  L++   +H+ I ++G++   ++ + 
Sbjct: 354 HEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNG 413

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           L++ Y +C A+ +SKRV   +++ + +  NAL +   +     EA+EL+  +  +  + N
Sbjct: 414 LVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPN 473

Query: 478 GSTFSIVLKACAAMTDLEQG 497
            STF  VL AC+ +  +++G
Sbjct: 474 SSTFLAVLCACSHVGFVDKG 493



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 232/453 (51%), Gaps = 20/453 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q +S ++K G   +  + + ++  + K  +   A R LFD    R ++T+N+LI G    
Sbjct: 90  QAHSTILKLGFISNVYICSAVVDMYAKCGEISSA-RVLFDQMPQRTVVTWNSLIYGYLAV 148

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
                A++LF ++    +   AF+ SS +  C  L+  E+   VHG+ LK G    V + 
Sbjct: 149 NCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVG 208

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  ++ Y+K G++  + + F   ++ + + +T+MV GY    + D++  +  EM    L 
Sbjct: 209 TSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLR 268

Query: 177 LNEFSLTAVLGASFDVKE----GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-D 231
            N  +  ++L +SF   +      Q+H   +++G  S V  ++   ++ +Y +C   L D
Sbjct: 269 PNCVTYNSLL-SSFSGPDCLSYCLQVHCCIIQLGLESNV--YIAATLVTVYSKCSSSLED 325

Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
             K+   +   D ++W+  IA         EA   F +++     I+ YT+ +++ ++G 
Sbjct: 326 FKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGN 385

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK + A  ++ G++  +++ N L+SMY +CG + D++ +F ++   D +SWN++
Sbjct: 386 SSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNAL 445

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           +  ++ +G+  +A+++F  M +  + PN  T  ++L A S+   + + ++ +   +KS  
Sbjct: 446 LTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIE-YFDTMKSDI 504

Query: 409 LLDDSMI---SCLITTYGKCNALNESKRVLSEI 438
           LL+   +   + L+ T+G+   LNE++  ++ +
Sbjct: 505 LLEPLKVEHYASLVDTFGRAGYLNEAEAFINSM 537



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 113/226 (50%)

Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTY 422
           D+         + N Y +  I+   + S S    +Q HS I+K GF+ +  + S ++  Y
Sbjct: 55  DLIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMY 114

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            KC  ++ ++ +  ++ ++  V  N+L    +  +C   A+EL+  +  +   V+  + S
Sbjct: 115 AKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVS 174

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
             L  C+ +   E G  +H L LK     ++ V ++++DMY KCG ++D++  F  +   
Sbjct: 175 SCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNR 234

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           ++  W +M+ GY+Q     E   L  +M    ++P+ +TY ++L+S
Sbjct: 235 NVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSS 280


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 196/630 (31%), Positives = 320/630 (50%), Gaps = 26/630 (4%)

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD--- 191
           CFR  +       T +  G+  N    +   V  E   LG  +       +L    D   
Sbjct: 21  CFRRTI-------TVVGVGFQKNHSLIQLNVVDAEEPKLGTRIESSYYFPLLQECIDRNL 73

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
             E   IHG  VK GF   +   +   ++N+Y +CG    A K+FD +   +V +W+  +
Sbjct: 74  ATEARMIHGHIVKTGFHEDL--FVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLL 131

Query: 252 AAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
                      A  LF  +       + YT+  +L++    + +  GKQ+ A+  K    
Sbjct: 132 TGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHID 191

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
              SIGN+L S Y K  ++  A   F  +  KD +SW S+I+   +NG   ++L  F  M
Sbjct: 192 FDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDM 251

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           L   + PN YT+ S+L A     +L    Q+HS  IK G+     + + ++  Y KC  L
Sbjct: 252 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 311

Query: 429 NESKRVLSEIDKKNAVHINAL----ASVLVYA----SCH---AEALELYRTIWGSCREVN 477
            E++++   ++  N V  NA+    A ++  A    + H   + AL +++ ++ S  + +
Sbjct: 312 IEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPD 371

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             TFS VL  C+ +  LEQG+ IH   +K+    D+ V +A++ MY KCG+I+ A +AF 
Sbjct: 372 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 431

Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
           ++   ++  W +M+ G+A+HG   +   LF  M   G+KP+++T++ VL++C HAGL  E
Sbjct: 432 EMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADE 491

Query: 598 ARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSAC 657
           A  Y   M   + + P ++H+AC++D+  R+G +E A   + +M   P+  IW  L++ C
Sbjct: 492 ALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGC 551

Query: 658 TIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPG 717
             +G  DLG  A  +LL+L+P +  TYV L N++ SAG W DV K+RK MKE+ + K   
Sbjct: 552 RSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKD 611

Query: 718 YSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           +SWI +    + F   D SH QS E+YK L
Sbjct: 612 WSWISIKEKVYSFKPNDKSHCQSLEMYKLL 641



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 278/562 (49%), Gaps = 41/562 (7%)

Query: 76  GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G R ++  +  L++ C       E  ++HG  +K GF   +++++  +  Y+K G + SA
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 133 EMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
              F D L   NV A+T ++ GYV N     + ++F++M   G   + ++L  VL A   
Sbjct: 113 HKVF-DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171

Query: 192 VKE---GEQIHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           ++    G+Q+H + +K  + F + + N L+    + Y +  +   A+K F  I E DV+S
Sbjct: 172 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLS----SFYSKFRRLEFAIKAFKIIKEKDVIS 227

Query: 247 WSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  I++ CD  +A      F D+  +  + NEYT+ ++LS+      L  G QI +   
Sbjct: 228 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 287

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE--------- 354
           K+G+   + I N+++ +Y KCG + +A+ +F+ +   + V+WN+MIAG+++         
Sbjct: 288 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 347

Query: 355 --NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +   + AL MF  +    + P+ +T +S+L   SN  +L+Q  Q+H  IIKSG L D 
Sbjct: 348 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADV 407

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + L++ Y KC +++++ +   E+  +  +   ++ +         +AL+L+  +   
Sbjct: 408 VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV 467

Query: 473 CREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLAL-KARYDQDIFVE--SAVIDMYCKCG 527
             + N  TF  VL AC  A + D    +A++   L + +Y+    ++  + +IDMY + G
Sbjct: 468 GIKPNQVTFVGVLSACSHAGLAD----EALYYFELMQKQYNIKPVMDHFACLIDMYLRLG 523

Query: 528 TIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI-TYLAV 585
            +E+A     K+    +   W+ ++ G   HG        +       +KP ++ TY+++
Sbjct: 524 RVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAAEQLLKLKPKDVETYVSL 581

Query: 586 LTSCCHAGLVREARTYLSCMSD 607
           L     AG  ++       M +
Sbjct: 582 LNMHISAGRWKDVSKVRKLMKE 603



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 259/569 (45%), Gaps = 65/569 (11%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  ++K G H D  + T L++ ++K      A +   +   R++  +  L++G  +   
Sbjct: 80  IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 139

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              AL+LF ++   G  P  +T   ++ AC SLQ  E    VH   +K        + + 
Sbjct: 140 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNS 199

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y+K   +  A   F+   + D +++T+++     NG+  +S   F++M S G++ N
Sbjct: 200 LSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPN 259

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E++LT+VL A      +  G QIH   +K+G+ S +   + N+IM LY++CG  ++A K+
Sbjct: 260 EYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL--IKNSIMYLYLKCGWLIEAQKL 317

Query: 236 FDEITEPDVVSWS--------------ERIAAACDGVEAFGLFKDLRFNDFQINEYTMIN 281
           F+ +   ++V+W+              + +AA   G  A  +F+ L  +  + + +T  +
Sbjct: 318 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSS 377

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LS       L  G+QI     K G +  V +G AL+SMY KCG ++ A   F  +  + 
Sbjct: 378 VLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT 437

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            +SW SMI G++ +G   QAL +F  M    + PN  T   +L A S++    +A+  + 
Sbjct: 438 MISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL-YYF 496

Query: 402 HIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
            +++  + +   M   +CLI  Y +   + E+  V+                       H
Sbjct: 497 ELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV-----------------------H 533

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAA--MTDLEQGKAIHCLALKARYDQDIFVES 517
               E   TIW           S+++  C +   +DL    A   L LK +   D+    
Sbjct: 534 KMNFEPNETIW-----------SMLIAGCRSHGKSDLGFYAAEQLLKLKPK---DVETYV 579

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ++++M+   G  +D  +  RK+ ++   G
Sbjct: 580 SLLNMHISAGRWKDVSKV-RKLMKEEKVG 607



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 185/383 (48%), Gaps = 34/383 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ LIK     D  +  +L S ++KF     A +     + +D+I++ ++IS      
Sbjct: 180 QVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNG 239

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q+  +L  F  +   G++P+ +T +S++ AC    +L     +H + +KLG+ S + + +
Sbjct: 240 QAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKN 299

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-----------EV 166
             +  Y K G ++ A+  F     L+ V + AM+ G+    +  +              +
Sbjct: 300 SIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAM 359

Query: 167 FVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F ++   G++ + F+ ++VL    +   +++GEQIHG  +K G L+ V   +  A++++Y
Sbjct: 360 FQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVV--VGTALVSMY 417

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMI 280
            +CG    A K F E+    ++SW+  I   A  G+  +A  LF+D+R    + N+ T +
Sbjct: 418 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 477

Query: 281 NLLSSVGGERILRAGKQIQAFCY------KVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
            +LS+        AG   +A  Y      +     V+     LI MY + G+V +A  + 
Sbjct: 478 GVLSACS-----HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 532

Query: 335 DYLIFKDSVS-WNSMIAGYSENG 356
             + F+ + + W+ +IAG   +G
Sbjct: 533 HKMNFEPNETIWSMLIAGCRSHG 555


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 184/568 (32%), Positives = 302/568 (53%), Gaps = 16/568 (2%)

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
           E   IHG  VK GF   +   +   ++N+Y +CG    A K+FD +   +V +W+  +  
Sbjct: 82  EARMIHGHIVKTGFHEDL--FVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTG 139

Query: 254 ACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
                    A  LF  +       + YT+  +L++    + +  GKQ+ A+  K      
Sbjct: 140 YVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFD 199

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
            SIGN+L S Y K  ++  A   F  +  KD +SW S+I+   +NG   ++L  F  ML 
Sbjct: 200 TSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLS 259

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PN YT+ S+L A     +L    Q+HS  IK G+     + + ++  Y KC  L E
Sbjct: 260 DGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIE 319

Query: 431 SKRVLSEIDKKNAVHINAL----ASVLVYA----SCH---AEALELYRTIWGSCREVNGS 479
           ++++   ++  N V  NA+    A ++  A    + H   + AL +++ ++ S  + +  
Sbjct: 320 AQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLF 379

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
           TFS VL  C+ +  LEQG+ IH   +K+    D+ V +A++ MY KCG+I+ A +AF ++
Sbjct: 380 TFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEM 439

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
              ++  W +M+ G+A+HG   +   LF  M   G+KP+++T++ VL++C HAGL  EA 
Sbjct: 440 PSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL 499

Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
            Y   M   + + P ++H+AC++D+  R+G +E A   + +M   P+  IW  L++ C  
Sbjct: 500 YYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRS 559

Query: 660 YGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYS 719
           +G  DLG  A  +LL+L+P +  TYV L N++ SAG W DV K+RK MKE+ + K   +S
Sbjct: 560 HGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWS 619

Query: 720 WIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           WI +    + F   D SH QS E+YK L
Sbjct: 620 WISIKEKVYSFKPNDKSHCQSLEMYKLL 647



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 274/548 (50%), Gaps = 41/548 (7%)

Query: 76  GLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSA 132
           G R ++  +  L++ C       E  ++HG  +K GF   +++++  +  Y+K G + SA
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 133 EMCFRDCLDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
              F D L   NV A+T ++ GYV N     + ++F++M   G   + ++L  VL A   
Sbjct: 119 HKVF-DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 177

Query: 192 VKE---GEQIHGFGVK--VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
           ++    G+Q+H + +K  + F + + N L+    + Y +  +   A+K F  I E DV+S
Sbjct: 178 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLS----SFYSKFRRLEFAIKAFKIIKEKDVIS 233

Query: 247 WSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  I++ CD  +A      F D+  +  + NEYT+ ++LS+      L  G QI +   
Sbjct: 234 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 293

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE--------- 354
           K+G+   + I N+++ +Y KCG + +A+ +F+ +   + V+WN+MIAG+++         
Sbjct: 294 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 353

Query: 355 --NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
             +   + AL MF  +    + P+ +T +S+L   SN  +L+Q  Q+H  IIKSG L D 
Sbjct: 354 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADV 413

Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
            + + L++ Y KC +++++ +   E+  +  +   ++ +         +AL+L+  +   
Sbjct: 414 VVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLV 473

Query: 473 CREVNGSTFSIVLKAC--AAMTDLEQGKAIHCLAL-KARYDQDIFVE--SAVIDMYCKCG 527
             + N  TF  VL AC  A + D    +A++   L + +Y+    ++  + +IDMY + G
Sbjct: 474 GIKPNQVTFVGVLSACSHAGLAD----EALYYFELMQKQYNIKPVMDHFACLIDMYLRLG 529

Query: 528 TIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI-TYLAV 585
            +E+A     K+    +   W+ ++ G   HG        +       +KP ++ TY+++
Sbjct: 530 RVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAAEQLLKLKPKDVETYVSL 587

Query: 586 LTSCCHAG 593
           L     AG
Sbjct: 588 LNMHISAG 595



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 259/569 (45%), Gaps = 65/569 (11%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+  ++K G H D  + T L++ ++K      A +   +   R++  +  L++G  +   
Sbjct: 86  IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 145

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
              AL+LF ++   G  P  +T   ++ AC SLQ  E    VH   +K        + + 
Sbjct: 146 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNS 205

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
               Y+K   +  A   F+   + D +++T+++     NG+  +S   F++M S G++ N
Sbjct: 206 LSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPN 265

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
           E++LT+VL A      +  G QIH   +K+G+ S +   + N+IM LY++CG  ++A K+
Sbjct: 266 EYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL--IKNSIMYLYLKCGWLIEAQKL 323

Query: 236 FDEITEPDVVSWS--------------ERIAAACDGVEAFGLFKDLRFNDFQINEYTMIN 281
           F+ +   ++V+W+              + +AA   G  A  +F+ L  +  + + +T  +
Sbjct: 324 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSS 383

Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
           +LS       L  G+QI     K G +  V +G AL+SMY KCG ++ A   F  +  + 
Sbjct: 384 VLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT 443

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            +SW SMI G++ +G   QAL +F  M    + PN  T   +L A S++    +A+  + 
Sbjct: 444 MISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL-YYF 502

Query: 402 HIIKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
            +++  + +   M   +CLI  Y +   + E+  V+                       H
Sbjct: 503 ELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV-----------------------H 539

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAA--MTDLEQGKAIHCLALKARYDQDIFVES 517
               E   TIW           S+++  C +   +DL    A   L LK +   D+    
Sbjct: 540 KMNFEPNETIW-----------SMLIAGCRSHGKSDLGFYAAEQLLKLKPK---DVETYV 585

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ++++M+   G  +D  +  RK+ ++   G
Sbjct: 586 SLLNMHISAGRWKDVSKV-RKLMKEEKVG 613



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 185/383 (48%), Gaps = 34/383 (8%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ LIK     D  +  +L S ++KF     A +     + +D+I++ ++IS      
Sbjct: 186 QVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNG 245

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           Q+  +L  F  +   G++P+ +T +S++ AC    +L     +H + +KLG+ S + + +
Sbjct: 246 QAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKN 305

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSK-----------EV 166
             +  Y K G ++ A+  F     L+ V + AM+ G+    +  +              +
Sbjct: 306 SIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAM 365

Query: 167 FVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
           F ++   G++ + F+ ++VL    +   +++GEQIHG  +K G L+ V   +  A++++Y
Sbjct: 366 FQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVV--VGTALVSMY 423

Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMI 280
            +CG    A K F E+    ++SW+  I   A  G+  +A  LF+D+R    + N+ T +
Sbjct: 424 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 483

Query: 281 NLLSSVGGERILRAGKQIQAFCY------KVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
            +LS+        AG   +A  Y      +     V+     LI MY + G+V +A  + 
Sbjct: 484 GVLSACS-----HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVV 538

Query: 335 DYLIFKDSVS-WNSMIAGYSENG 356
             + F+ + + W+ +IAG   +G
Sbjct: 539 HKMNFEPNETIWSMLIAGCRSHG 561


>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 171/523 (32%), Positives = 274/523 (52%), Gaps = 8/523 (1%)

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVE-----AFGLFKDLRFNDFQINEYTMINLLSSV 286
           A ++  +I  P +  W   +      V      +F  ++ +R N    + +T   LL +V
Sbjct: 55  ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
              R      Q  A   K GF   + + N+LIS Y  CG       +FD    KD VSW 
Sbjct: 115 FKLRDANPF-QFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           +MI G+  N    +A+  F  M    +  N  T+ S+L+A   ++ ++    +H   +++
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEA 233

Query: 407 GFLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           G +  D  I S L+  YGKC   +++++V  E+  +N V   AL +  V   C  + + +
Sbjct: 234 GRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFV 293

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +  S    N  T S VL ACA +  L +G+ +HC  +K   + +  V + +ID Y K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAK 353

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG +E+A   F ++   ++  W AM+ G+A HG      +LF+ M    V P+E+T++ V
Sbjct: 354 CGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVV 413

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C H GLV E R     M +   L P+ +HYAC+VDL GR GLLE AK  I++MP+ P
Sbjct: 414 LSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEP 473

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
              +W +L  +C I+ + +LG  A S++++LQP +   Y LL+NLY+ +  W+DV ++RK
Sbjct: 474 TNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRK 533

Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS-QSKEIYKEL 747
           +MK++ + K PG SWI V G  H F A D     +S ++YK L
Sbjct: 534 QMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTL 576



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 223/452 (49%), Gaps = 18/452 (3%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKL--FDRLRYQG 76
           + L+   T    FR A R L   Q   I  +++L+   +        L    + ++R  G
Sbjct: 40  SRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNG 99

Query: 77  LRPDAFTFSSLVKACGSLQENEIV--HGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           + P   TF  L+KA   L++      H   LK GF S +++ +  I  Y+  G       
Sbjct: 100 VVPSRHTFPPLLKAVFKLRDANPFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSR 159

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---D 191
            F    D D V++TAM+ G+V N    ++   FVEM+  G+  NE ++ +VL A+    D
Sbjct: 160 VFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAED 219

Query: 192 VKEGEQIHGFGVKVGFLSGVCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
           V+ G  IHGF ++ G +   C+  + ++++++Y +CG   DA K+FDE+   +VV+W+  
Sbjct: 220 VRFGRSIHGFYLEAGRVR--CDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTAL 277

Query: 251 IAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
           IA    G    +   +F+++  +D   NE T+ ++LS+      L  G+++  +  K   
Sbjct: 278 IAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSI 337

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
               ++G  LI  Y KCG + +A  +F+ L  K+  +W +MI G++ +G+   A+D+F  
Sbjct: 338 EINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHT 397

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM--ISCLITTYGKC 425
           ML   + PN  T   +L A ++   +++  ++    +K  F L+      +C++  +G+ 
Sbjct: 398 MLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLS-MKERFNLEPKADHYACMVDLFGRK 456

Query: 426 NALNESKRVLSE--IDKKNAVHINALASVLVY 455
             L E+K ++    ++  NAV      S L++
Sbjct: 457 GLLEEAKALIERMPMEPTNAVWGALFGSCLIH 488



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 167/348 (47%), Gaps = 13/348 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q ++ ++K G   D  +  +LIS ++    F    R    T+++D++++ A+I G  R  
Sbjct: 124 QFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRND 183

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLG-FSSRVYLV 116
            S  A+  F  ++  G+  +  T  S++KA    ++      +HG  L+ G     V++ 
Sbjct: 184 SSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIG 243

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           S  ++ Y K G    A+  F +    + V +TA++ GYV    F+K   VF EM    + 
Sbjct: 244 SSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVA 303

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            NE +L++VL A   V     G ++H + +K      +   +   +++ Y +CG   +A+
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSI--EINTTVGTTLIDFYAKCGCLEEAI 361

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+ + E +V +W+  I   AA    + A  LF  +  +    NE T I +LS+     
Sbjct: 362 LVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGG 421

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYL 337
           ++  G+++     +   +E  +   A ++ ++G+ G + +A+++ + +
Sbjct: 422 LVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERM 469


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 187/576 (32%), Positives = 300/576 (52%), Gaps = 8/576 (1%)

Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
           SL    G + D++ G  +H   V  G  +     L N ++ +Y  C     A+++F  + 
Sbjct: 25  SLLQSCGRAGDLRRGRLLHARLVLSG-AAAASTFLANHLITMYSHCADLASALRLFAAMP 83

Query: 241 EPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
             + VSW+  ++     +   +A   F  +R        + + +   +         G Q
Sbjct: 84  RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143

Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
           +     ++GF   + + + L  MY KCG +++A  +FD +  KD+V+W +MI GY++NG 
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203

Query: 358 FNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
              A+  F  M    L+  + +   S+L A    K    +  +H  + K+GF L+ ++ +
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 263

Query: 417 CLITTYGKCNALNESKRVLSEIDKK--NAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            LI  Y K   +  + RVL +ID    N V   ++    +   C  EAL +Y  +     
Sbjct: 264 ALIDMYAKSMDVESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 322

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           E N  TFS ++K CA    LEQG  +H   +K    +D FV S ++DMY KCG I  + +
Sbjct: 323 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 382

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F +I   +   WNA++  +AQHG   E    F++M   G++P+ I ++++LT+C HAGL
Sbjct: 383 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 442

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V E   Y   M + HG+ P+ EHY+CI+D  GR G L+ A   I +MPI P+A+ W SLL
Sbjct: 443 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 502

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            AC + G+ +LG +A   L++L+P N   +V LS +YAS G W DV  +RK M++  + K
Sbjct: 503 GACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKK 562

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            PG+SW+     TH F + D SH Q K+IY++L +L
Sbjct: 563 LPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEEL 598



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 250/542 (46%), Gaps = 56/542 (10%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L+  LI+ ++  AD   A R       R+ +++  L+SGL++      AL  F  +R  G
Sbjct: 58  LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 117

Query: 77  LRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
           + P  F  SS  +A  +L        +H V ++LGF + +++ S   + Y+K G +  A 
Sbjct: 118 VAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEAC 177

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-ELNEFSLTAVLGASFDV 192
             F      D VA+TAM+ GY  NG  + +   F +M+  GL   ++    +VL AS  +
Sbjct: 178 RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGL 237

Query: 193 KEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEP---DVVS 246
           K+G   + IH    K GF   V   + NA++++Y +      A ++     +P   +VVS
Sbjct: 238 KDGWLSKSIHCCVTKAGFELEVA--VRNALIDMYAKSMDVESASRVLK--IDPGGWNVVS 293

Query: 247 WSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
            +  I      D V EA  ++ +LR    + NE+T  +++     + +L  G Q+ A   
Sbjct: 294 GTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVI 353

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K   +    +G+ L+ MYGKCG ++ +  +F+ + ++  ++WN++I  ++++G   +A+ 
Sbjct: 354 KTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQ 413

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTY 422
            F  M+   + PN     S+L A S++  + + ++  +S     G    +   SC+I TY
Sbjct: 414 AFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTY 473

Query: 423 GKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
           G+   L+E+ + +SE+  K NA           Y  C         ++ G+CR       
Sbjct: 474 GRAGRLDEAYKFISEMPIKPNA-----------YGWC---------SLLGACRMRGSKEL 513

Query: 482 SIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR 541
             V  A   +  LE G              +  +  ++  +Y   G  ED K A RK+ R
Sbjct: 514 GEV--AAQNLMKLEPG--------------NTGIHVSLSGIYASLGQWEDVK-AVRKLMR 556

Query: 542 DS 543
           DS
Sbjct: 557 DS 558



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +IK     D  + +TL+  + K      + +   + + R  I +NA+I+  A+  
Sbjct: 347 QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHG 406

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               A++ FDR+ Y G+RP+   F SL+ AC
Sbjct: 407 HGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 437


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 198/723 (27%), Positives = 367/723 (50%), Gaps = 41/723 (5%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----LQENEI 99
           +D +T+  LI    +   S  AL LF  ++ +G+ P    F +++ AC +    L+E   
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +HGV       S  Y+ +  +  Y K   +  A   F        V + AM+  Y     
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVC------N 213
            +++ +VF  M   G++    +   VL A   +K+        ++V  L  +C      +
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKD--------LEVAKLVKLCVEEREHD 233

Query: 214 HLNN-----AIMNLYVRCGQKLDAVKMFDE------ITEPDVVSWSERIAAACDGVEAFG 262
           HL++     A++N Y  CG    A + F        +    +  +++R     D  EA  
Sbjct: 234 HLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQR--ERWD--EALE 289

Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG 322
           LFK +     +++    + +L++  G R L  G+ I  F  ++ F   V+ GNALI+MYG
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYG 349

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP-NGYTMA 381
           KCG + +A  +F  +  +D +SWN++IA + ++    +AL +  H+++   +  +  +  
Sbjct: 350 KCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLL-HLMQLDGVKADKISFV 408

Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
           + L   + S++L +   +HS I++SG   D  + + ++  YG C + +++ RV   +  +
Sbjct: 409 NALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR 468

Query: 442 NAVHINALASVLVYAS---CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           + V  NA+  +  YA+     +EAL L++ +       +  +F   L ACAA   L +GK
Sbjct: 469 DQVSWNAM--ITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK 526

Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG 558
            +H    +   + ++ V +AV++MY K G++  A++ F K+    +  WN M+  +AQHG
Sbjct: 527 LLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHG 586

Query: 559 CYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA-RTYLSCMSDLHGLIPQLEH 617
              +V   F +M+  G  P+++T+++V+++C H GLV++  + ++S + D   + P+ EH
Sbjct: 587 HADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEH 646

Query: 618 YACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQ 677
           Y C+VDL+ R G L+ A+  I   P+ PD  I  ++L A  ++ +++    +   L+EL 
Sbjct: 647 YYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELT 706

Query: 678 PDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSH 737
           PD  + YV+LSNLY   G  ++  K+R+ M EK + KEP +S I V    H F+ GD+++
Sbjct: 707 PDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTN 766

Query: 738 SQS 740
           +++
Sbjct: 767 ART 769



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 149/619 (24%), Positives = 278/619 (44%), Gaps = 18/619 (2%)

Query: 93  SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
           SL   + VH    K       ++    +  Y   G ++ A+ CF      D + +  ++ 
Sbjct: 13  SLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIR 72

Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-SFD---VKEGEQIHGFGVKVGFL 208
            +   G+ +++  +F  M+  G+     +  AVLGA S D   ++EG +IH  GV  G  
Sbjct: 73  AHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH--GVLRGTA 130

Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFK 265
               ++++  ++++Y +C    DA K+FD I    VV W+  I A        +A  +F 
Sbjct: 131 MESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFY 190

Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV---GFMEVVSIGNALISMYG 322
            +     +    T I +L +    + L   K ++  C +      +   S   AL++ YG
Sbjct: 191 AMLLEGVKAERITFIGVLDACSKLKDLEVAKLVK-LCVEEREHDHLHDSSFATALVNFYG 249

Query: 323 KCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMAS 382
            CG +  A   F      + +   +MI  Y++   +++AL++F  ML   +  +     +
Sbjct: 250 SCGDLEQAFRAFSRHRL-ELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMA 308

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L A S  + L++   +H  + +  F    +  + LI  YGKC +L E+  V   +  ++
Sbjct: 309 VLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRD 368

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +  N + +     S H EAL L   +     + +  +F   L  CAA   L +G+ IH 
Sbjct: 369 VISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHS 428

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY-AQHGCYH 561
             +++    D+ +++A++DMY  C + +DA R FR +       WNAM+  Y AQ     
Sbjct: 429 WIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSS 488

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           E   LF +M   G  PD I+++A L++C     + E +     + +  GL   +     +
Sbjct: 489 EALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAV 547

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL-LELQPDN 680
           +++  + G L  A+    +MP+ PD   W  ++SA   +G+ D  L    ++  E +  N
Sbjct: 548 LNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPN 606

Query: 681 ESTYVLLSNLYASAGMWND 699
           + T+V + +  +  G+  D
Sbjct: 607 DVTFVSVVSACSHGGLVKD 625



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 176/379 (46%), Gaps = 6/379 (1%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +LL  V   R L  GK++ A   K        +G+ L+ MY  CG + DA++ FD +  +
Sbjct: 3   DLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQ 62

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS-NSKSLKQAMQV 399
           D+++W  +I  + + G   QAL +F  M    + P      ++L A S + + L++  ++
Sbjct: 63  DALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRI 122

Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
           H  +  +    D  + + L+  YGKC+++ ++++V   I  K  V  NA+ +       H
Sbjct: 123 HGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHH 182

Query: 460 AEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--QDIFVES 517
            +A++++  +     +    TF  VL AC+ + DLE  K +     +  +D   D    +
Sbjct: 183 EQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT 242

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
           A+++ Y  CG +E A RAF +  R  L    AM+  Y Q   + E   LF  M   GVK 
Sbjct: 243 ALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKL 301

Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
           D I  +AVL +C     + E R     M ++      +     ++++ G+ G LE A   
Sbjct: 302 DRIACMAVLNACSGPRGLEEGRMIHGFMREIR-FDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 638 IDQMPIPPDAHIWQSLLSA 656
              M    D   W ++++A
Sbjct: 361 FRSMQ-HRDVISWNTIIAA 378



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           ++ +L   A    L+ GK +H    K+  D+  F+   ++ MY  CG++ DAK  F ++ 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC-CHAGLVREAR 599
                 W  ++  + Q G   +  +LF  M   GV P    ++AVL +C     L+ E R
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 600 TYLSCMSDLHGLIPQLEHY--ACIVDLLGRVGLLEGAKMTID 639
                   L G   + +HY    ++ + G+   +E A+   D
Sbjct: 121 RIHGV---LRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFD 159


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 303/566 (53%), Gaps = 10/566 (1%)

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
           + +H   +K G L     H    +++ Y++C    +A K+FDE+    +V+W+  I++  
Sbjct: 21  KSLHTHILKSGSLFSFFGH---KLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHV 77

Query: 256 D---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
                 EA  L+ ++ F     + YT   +  +     + R G++       +GF EV  
Sbjct: 78  SRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGF-EVSD 136

Query: 313 --IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             +   ++ MY K G++ DAR +FD ++ KD V + ++I GY++ G   +AL++F  M+ 
Sbjct: 137 GFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVG 196

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
             + PN YT+AS+L +  N   L     +H  ++KSG     +  + L+T Y KCN + +
Sbjct: 197 SRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVED 256

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           S +V + +   + V   +    LV       AL ++R +       N  TFS +L AC++
Sbjct: 257 SIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSS 316

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
           +  LE G+ IH + +K   D + +V++A+I +Y KCG +E A+  F  +    +   N M
Sbjct: 317 LAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTM 376

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           +  YAQ+G  HE   LF +M K G KP+ +T++++L +C +AGLV E     S + + H 
Sbjct: 377 IYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHS 436

Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
           +    +HY C++DLLGR    E A M I++    PD   W++LL+AC I+G +++     
Sbjct: 437 IELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFM 495

Query: 671 SKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHF 730
            K+L+  P +  T++LL+N+YASAG W++V +++   ++  L K P  SW+ +    H F
Sbjct: 496 KKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTF 555

Query: 731 YAGDSSHSQSKEIYKELIKLYEHMVA 756
            AGD SH ++ EI + L +L E ++ 
Sbjct: 556 MAGDLSHPRAHEISEMLHELIEKVIT 581



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 164/579 (28%), Positives = 281/579 (48%), Gaps = 53/579 (9%)

Query: 21  LISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPD 80
           LI  + K +    A +   +  NR I+T+N++IS      ++  A++L+D + ++G+ PD
Sbjct: 41  LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPD 100

Query: 81  AFTFSSLVKA---CGSLQENEIVHGVCLKLGFS-SRVYLVSGFIENYAKSGEIVSAEMCF 136
           A+TFS++ KA    G  +E +  HG+ + LGF  S  ++ +G ++ YAK G++  A   F
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160

Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVK 193
              LD D V +TA++ GY   G   ++ EVF +M    ++ NE++L +VL   G   D+ 
Sbjct: 161 DRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220

Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
            G+ IHG  VK G  S V +    +++ +Y +C    D++K+F+ +     V+W+  I  
Sbjct: 221 NGKLIHGLVVKSGLESVVASQ--TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVG 278

Query: 254 AC-DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
              +G E  A  +F+++       N +T  ++L +     +L AG+QI A   K+G    
Sbjct: 279 LVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGN 338

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
             +  ALI +YGKCG V  ARS+F+ L   D VS N+MI  Y++NGF ++AL++F  M +
Sbjct: 339 KYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKK 398

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL-LDDSMISCLITTYGKCNALN 429
               PN  T  SIL A +N+  +++  Q+ S I  +  + L     +C+I   G+     
Sbjct: 399 LGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFE 458

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
           E+  ++ E    + +                     +RT+  +C+ ++G    +  K   
Sbjct: 459 EAAMLIEEGKNPDVIQ--------------------WRTLLNACK-IHGEV-EMAEKFMK 496

Query: 490 AMTD-LEQGKAIHCL-----ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            M D   +    H L     A   ++D  I ++SA  D+  K    +    ++  I R+ 
Sbjct: 497 KMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLK----KTPAMSWVDIDREV 552

Query: 544 LAGWNAMMMGYAQHGCYHEVS----NLFNKMSKFGVKPD 578
               +  M G   H   HE+S     L  K+   G  PD
Sbjct: 553 ----HTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPD 587



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 4/219 (1%)

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N YT  S++   +N KSL     +H+HI+KSG L        LI  Y KC+ + E++++ 
Sbjct: 2   NCYT--SLIAQFTNKKSLTTLKSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLF 58

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
            E+  ++ V  N++ S  V      EA+ELY  +       +  TFS + KA + M    
Sbjct: 59  DEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSR 118

Query: 496 QGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
           +G+  H LA+   ++  D FV + ++DMY K G ++DA+  F ++    +  + A+++GY
Sbjct: 119 EGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGY 178

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
            Q G   E   +F  M    +KP+E T  +VL SC + G
Sbjct: 179 NQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 11/260 (4%)

Query: 2   IYSLLIKNGHHLDPILS--TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
           I+ L++K+G  L+ +++  T+L++ ++K      + +          +T+ + I GL + 
Sbjct: 225 IHGLVVKSG--LESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN 282

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
            +   AL +F  +    + P+ FTFSS++ AC SL   +  E +H V +KLG     Y+ 
Sbjct: 283 GREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVD 342

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I  Y K G +  A   F    +LD V+   M+  Y  NG   ++ E+F  M+ LG +
Sbjct: 343 AALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHK 402

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            N  +  ++L A  +   V+EG QI         +    +H    +++L  R  +  +A 
Sbjct: 403 PNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY-TCMIDLLGRAKRFEEAA 461

Query: 234 KMFDEITEPDVVSWSERIAA 253
            + +E   PDV+ W   + A
Sbjct: 462 MLIEEGKNPDVIQWRTLLNA 481



 Score = 42.7 bits (99), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 47/93 (50%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+++ +K G   +  +   LI  + K  +  +A          D+++ N +I   A+  
Sbjct: 325 QIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNG 384

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
               AL+LF+R++  G +P+  TF S++ AC +
Sbjct: 385 FGHEALELFERMKKLGHKPNVVTFISILLACNN 417


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 279/537 (51%), Gaps = 38/537 (7%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQ 273
           NA+++LY + G   D   +FD +   D VS++  I   A    G  A G+F  ++    +
Sbjct: 93  NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
             EYT +++L++      LR GKQI            V + NAL  +Y +CG+++ AR +
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRL 212

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD ++ ++ V+WN MI+GY +N    + +D+F  M   +L P+  T +S+L A       
Sbjct: 213 FDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAY------ 266

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
                     I++G++                   +E+++V  EI +K+ V    +    
Sbjct: 267 ----------IQAGYI-------------------DEARKVFGEIREKDEVCWTIMIVGC 297

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
                  +AL L+  +       +G T S V+ +CA +  L  G+ +H  A     + D+
Sbjct: 298 AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL 357

Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
            V SA++DMYCKCG   DA   F  +   ++  WN+M+ GYA +G   E  +L+  M + 
Sbjct: 358 LVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE 417

Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
            +KPD +T++ VL++C HAGLV E + Y   MSD HGL P  +HYAC+V+L GR G ++ 
Sbjct: 418 NLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDK 477

Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
           A   I  M   P++ IW ++LS C + G+I  G +A   L+EL P N   Y++LSN+YA+
Sbjct: 478 AVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAA 537

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            G W DV  +R  MK K + K   YSWI +    H F A D +H  +K I+ +L +L
Sbjct: 538 RGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRL 594



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 213/432 (49%), Gaps = 46/432 (10%)

Query: 35  FRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS 93
            R +FD   +RD ++YN +ISG A   + GPAL +F R++ +GL+P  +T  S++ AC  
Sbjct: 108 LRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQ 167

Query: 94  ---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
              L+  + +HG  +       V++ +   + YA+ GEI  A   F   +  + V +  M
Sbjct: 168 LLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLM 227

Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSG 210
           + GY+ N + +K  ++F EM+   L+ ++ + ++VLGA                      
Sbjct: 228 ISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA---------------------- 265

Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--AFGLFKDL 267
                       Y++ G   +A K+F EI E D V W+  I   A +G E  A  LF ++
Sbjct: 266 ------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEM 313

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
              + + + YT+ +++SS      L  G+ +    + +G  + + + +AL+ MY KCG  
Sbjct: 314 LLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVT 373

Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
            DA +IF  +  ++ VSWNSMI GY+ NG   +AL ++ +MLE +L P+  T   +L A 
Sbjct: 374 RDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSAC 433

Query: 388 SNSKSLKQAMQVH-SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
            ++  +++  +   S   + G        +C++  +G+   ++++  ++S + ++     
Sbjct: 434 VHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEP---- 489

Query: 447 NALASVLVYASC 458
           N+L    V + C
Sbjct: 490 NSLIWTTVLSVC 501



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 176/388 (45%), Gaps = 47/388 (12%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           YAKSG +    + F +    D+V+Y  ++ G+  NG    +  VF+ M+  GL+  E++ 
Sbjct: 99  YAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTH 158

Query: 183 TAVLGAS---FDVKEGEQIHGFGV--KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
            +VL A     D++ G+QIHG  +   +G    VC    NA+ +LY RCG+   A ++FD
Sbjct: 159 VSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVC----NALTDLYARCGEIDQARRLFD 214

Query: 238 EITEPDVVSWSERIAAACDGVEA---FGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
            +   +VV+W+  I+      +      LF +++ ++ + ++ T  ++L           
Sbjct: 215 RMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVL----------- 263

Query: 295 GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSE 354
           G  IQA                        G +++AR +F  +  KD V W  MI G ++
Sbjct: 264 GAYIQA------------------------GYIDEARKVFGEIREKDEVCWTIMIVGCAQ 299

Query: 355 NGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM 414
           NG    AL +F  ML  +  P+GYT++S++ + +   SL     VH      G   D  +
Sbjct: 300 NGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLV 359

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            S L+  Y KC    ++  + S +  +N V  N++           EAL LY  +     
Sbjct: 360 SSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENL 419

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHC 502
           + +  TF  VL AC     +E+GK   C
Sbjct: 420 KPDSVTFVGVLSACVHAGLVEEGKEYFC 447



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 49/263 (18%)

Query: 488 CAAMTDLEQGKAIHC-LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           C   +D++Q K +   + L      D F+ + ++++Y K G I  A++ F ++ +     
Sbjct: 32  CFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFS 91

Query: 547 WNAMMMGYAQHGCYHEVSNLFN-------------------------------KMSKFGV 575
           WNAM+  YA+ G   ++  +F+                               +M K G+
Sbjct: 92  WNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL 151

Query: 576 KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG--LIPQL--EHYAC--IVDLLGRVG 629
           KP E T+++VL +C     +R  +        +HG  +I  L    + C  + DL  R G
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRRGK-------QIHGRIIICNLGGNVFVCNALTDLYARCG 204

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLL 687
            ++ A+   D+M I  +   W  ++S        +  + L    ++  L+PD  +   +L
Sbjct: 205 EIDQARRLFDRMVI-RNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVL 263

Query: 688 SNLYASAGMWNDVGKLRKEMKEK 710
              Y  AG  ++  K+  E++EK
Sbjct: 264 G-AYIQAGYIDEARKVFGEIREK 285



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 33/186 (17%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D ++S+ L+  + K    R A+      Q R+++++N++I G A   Q   AL L++ + 
Sbjct: 356 DLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENML 415

Query: 74  YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
            + L+PD+ TF  ++ AC        VH               +G +E     G+     
Sbjct: 416 EENLKPDSVTFVGVLSAC--------VH---------------AGLVE----EGKEYFCS 448

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF--- 190
           M  +  L+     Y  MV  +  +G  DK+ ++   + S+  E N    T VL       
Sbjct: 449 MSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDL---ISSMSQEPNSLIWTTVLSVCVMKG 505

Query: 191 DVKEGE 196
           D+K GE
Sbjct: 506 DIKHGE 511


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 169/527 (32%), Positives = 280/527 (53%), Gaps = 25/527 (4%)

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD++ + DV+SW+  I+    +G+     G++K + +    ++  T+I++L     
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK + +   K  F   ++  N L+ MY KCG ++ A  +F+ +  ++ VSW SM
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY+ +G  + A+ +   M +  +  +   + SIL A + S SL     VH +I  +  
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + + L+  Y KC ++  +  V S +  K+ +  N +   L               
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL--------------- 428

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                 + +  T + VL ACA+++ LE+GK IH   L+  Y  D  V +A++D+Y KCG 
Sbjct: 429 ------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  A+  F  I    L  W  M+ GY  HG  +E    FN+M   G++PDE++++++L +
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GL+ +   +   M +   + P+LEHYAC+VDLL R G L  A   I+ +PI PDA 
Sbjct: 543 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDAT 602

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW +LL  C  Y +I+L      ++ EL+P+N   YVLL+N+YA A  W +V +LR+++ 
Sbjct: 603 IWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIG 662

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAG-DSSHSQSKEIYKELIKLYEHM 754
           ++ L K PG SWI + G  + F +G +SSH  SK I   L K+   M
Sbjct: 663 KQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKM 709



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 212/442 (47%), Gaps = 55/442 (12%)

Query: 21  LISHFTKFADFRR--------------------AFRFLFDTQNRDIITYNALISGLARFC 60
           ++S + K  DF+                     AF       +RD+I++N++ISG     
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNG 230

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   L ++ ++ Y G+  D  T  S++  C   G+L   + VH + +K  F  R+   +
Sbjct: 231 LTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSN 290

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++  A   F    + + V++T+M+ GY  +G  D + ++  +M   G++L
Sbjct: 291 TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKL 350

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCGQKLD 231
           +  ++T++L A   S  +  G+ +H + +K   +     VC    NA+M++Y +CG    
Sbjct: 351 DVVAITSILHACARSGSLDNGKDVHDY-IKANNMESNLFVC----NALMDMYAKCGSMEA 405

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           A  +F  +   D++SW+  I                   + + +  TM  +L +      
Sbjct: 406 ANSVFSTMVVKDIISWNTMIG------------------ELKPDSRTMACVLPACASLSA 447

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK+I  +  + G+     + NAL+ +Y KCG +  AR +FD +  KD VSW  MIAG
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 507

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G+ N+A+  F  M +  + P+  +  SIL A S+S  L+Q  +   +I+K+ F ++
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIE 566

Query: 412 DSM--ISCLITTYGKCNALNES 431
             +   +C++    +   L+++
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKA 588



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 133/604 (22%), Positives = 263/604 (43%), Gaps = 70/604 (11%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDI--ITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           I HF +  D   A   +   +  ++   TY++++   A         K+   ++   +  
Sbjct: 73  ILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGV 132

Query: 80  D---AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV------ 130
           D        S    CG L+E   V     K      VYL +  +  YAK G+        
Sbjct: 133 DEALGLKLVSFYATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLF 188

Query: 131 --------------SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
                         SA   F    D D +++ +M+ GYV NG  ++   ++ +M  LG++
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  ++ +VL     S  +  G+ +H   +K  F   +  + +N ++++Y +CG    A+
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI--NFSNTLLDMYSKCGDLDGAL 306

Query: 234 KMFDEITEPDVVSWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+++ E +VVSW+  IA    DG    A  L + +     +++   + ++L +     
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK +  +         + + NAL+ MY KCG +  A S+F  ++ KD +SWN+MI 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
                                 L P+  TMA +L A ++  +L++  ++H +I+++G+  
Sbjct: 427 ---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + + L+  Y KC  L  ++ +   I  K+ V    + +         EA+  +  + 
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGT 528
            +  E +  +F  +L AC+    LEQG     + +K  ++ +  +E  + ++D+  + G 
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGN 584

Query: 529 IEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLA 584
           +  A        I  D+   W A++ G      YH++  L  K+++  F ++P+   Y  
Sbjct: 585 LSKAYEFIETLPIAPDATI-WGALLCGCRN---YHDIE-LAEKVAERVFELEPENSGYYV 639

Query: 585 VLTS 588
           +L +
Sbjct: 640 LLAN 643



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 169/359 (47%), Gaps = 30/359 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++SL IK+        S TL+  ++K  D   A R       R+++++ ++I+G  R  +
Sbjct: 273 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGR 332

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           S  A+KL  ++  +G++ D    +S++ AC   GSL   + VH         S +++ + 
Sbjct: 333 SDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNA 392

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G + +A   F   +  D +++  M+             E+  + R++   L 
Sbjct: 393 LMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------GELKPDSRTMACVL- 439

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
                A L A   ++ G++IHG+ ++ G+ S    H+ NA+++LYV+CG    A  +FD 
Sbjct: 440 --PACASLSA---LERGKEIHGYILRNGYSSD--RHVANALVDLYVKCGVLGLARLLFDM 492

Query: 239 ITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D+VSW+  IA       G EA   F ++R    + +E + I++L +     +L  G
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 296 KQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
            +   +  K  F     + +   ++ +  + G ++ A    + L I  D+  W +++ G
Sbjct: 553 WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/465 (21%), Positives = 180/465 (38%), Gaps = 86/465 (18%)

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
             +N+ I  + + G    A+++ C   +  L    Y+  S+L+  +  KS     +VHS 
Sbjct: 67  TDYNAKILHFCQLGDLENAMELICMCKKSELETKTYS--SVLQLCAGLKSFTDGKKVHSI 124

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN-------------------- 442
           I  +   +D+++   L++ Y  C  L E +RV   ++KKN                    
Sbjct: 125 IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES 184

Query: 443 -------------------------------AVHINALASVLVYASCHAEALELYRTIWG 471
                                           +  N++ S  V        L +Y+ +  
Sbjct: 185 ICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY 244

Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIED 531
              +V+ +T   VL  CA    L  GKA+H LA+K+ +++ I   + ++DMY KCG ++ 
Sbjct: 245 LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDG 304

Query: 532 AKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH 591
           A R F K+   ++  W +M+ GY + G       L  +M K GVK D +   ++L +C  
Sbjct: 305 ALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACAR 364

Query: 592 AGLVREARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLLEGAKMTIDQM---- 641
           +G +   +       D+H  I     +   + C  ++D+  + G +E A      M    
Sbjct: 365 SGSLDNGK-------DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKD 417

Query: 642 ---------PIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVLLSNLY 691
                     + PD+     +L AC     ++ G  + G  L      +      L +LY
Sbjct: 418 IISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSW-IHVGGYTHHFYAGDS 735
              G+      L   +  K L      SW + + GY  H Y  ++
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLV-----SWTVMIAGYGMHGYGNEA 517


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/534 (33%), Positives = 277/534 (51%), Gaps = 27/534 (5%)

Query: 246 SWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI------LRA-G 295
           SW+ +I  A    D   A  LF  +R +D         ++L+S+ G         LRA G
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASD---PAAACSSVLTSLPGALKSCAALGLRALG 77

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMY--------------GKCGQVNDARSIFDYLIFKD 341
             + A   + G        NAL+++Y              G    +   R +FD +  KD
Sbjct: 78  ASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKD 137

Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
            VSWN+++ G +E+G   +AL +   M      P+ +T++S+L   +    +++ M++H 
Sbjct: 138 VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHG 197

Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE 461
              ++GF  D  + S LI  Y  C   + S +V   +  ++A+  N++ +         E
Sbjct: 198 FATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDE 257

Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
           AL L+R +  S  +    TFS ++ AC  +  L  GK +H   ++  +D ++F+ S++ID
Sbjct: 258 ALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLID 317

Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
           MYCKCG +  A+R F +I    +  W AM+MG+A HG   E   LF++M    +KP+ IT
Sbjct: 318 MYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHIT 377

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +LAVLT+C HAGLV +   Y + MSD +G++P LEH+A + D LGR G LE A   I  M
Sbjct: 378 FLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGM 437

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
            I P A +W +LL AC ++ N  L      K+ +L+P +  ++++LSN Y+S+G WN+  
Sbjct: 438 KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAA 497

Query: 702 KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
            LRK M++K + KEP  SWI V    H F A D SH   + I   L    E MV
Sbjct: 498 HLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMV 551



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 157/328 (47%), Gaps = 14/328 (4%)

Query: 34  AFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVK--- 89
           + R +FD    +D++++N L+ G A   + G AL L   +   G +PD+FT SS++    
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184

Query: 90  ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTA 149
               ++    +HG   + GF   V++ S  I+ YA       +   F +    D + + +
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244

Query: 150 MVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVG 206
           M+ G   NG  D++  +F  M   G++    + ++++ A  ++     G+Q+H + ++ G
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304

Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGL 263
           F   V   ++++++++Y +CG    A ++FD I  PD+VSW+  I   A      EA  L
Sbjct: 305 FDGNV--FISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVL 362

Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYG 322
           F  +   + + N  T + +L++     ++  G K   +     G +  +    AL    G
Sbjct: 363 FDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLG 422

Query: 323 KCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           + G++ +A +    +  K + S W++++
Sbjct: 423 RPGKLEEAYNFISGMKIKPTASVWSTLL 450



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 3/191 (1%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +++    +NG H D  + ++LI  +        + +   +   RD I +N++++G A+  
Sbjct: 194 ELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNG 253

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
               AL LF R+ + G++P   TFSSL+ ACG+L      + +H   ++ GF   V++ S
Sbjct: 254 SVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISS 313

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ Y K G +  A   F      D V++TAM+ G+  +G   ++  +F  M    L+ 
Sbjct: 314 SLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKP 373

Query: 178 NEFSLTAVLGA 188
           N  +  AVL A
Sbjct: 374 NHITFLAVLTA 384



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ +I+ G   +  +S++LI  + K  +   A R     Q+ DI+++ A+I G A   
Sbjct: 295 QLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHG 354

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  AL LFDR+    L+P+  TF +++ AC
Sbjct: 355 PAREALVLFDRMELGNLKPNHITFLAVLTAC 385


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 164/442 (37%), Positives = 254/442 (57%), Gaps = 5/442 (1%)

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           ALI+ Y   G ++DAR +FD +  KD VSWN+MI+GY ++G F +A+  F  M E +++P
Sbjct: 202 ALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLP 261

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           N  TM  +L A  +++S +    + S +  +GF  +  + + LI  Y KC   + ++ + 
Sbjct: 262 NKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
             I++K+ +  N +     Y S + EAL L+  +  S  + N  TF  +L ACA +  L+
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381

Query: 496 QGKAIHCLALKA-RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
            GK +H    K  R   +  + +++IDMY KCG IE A+R FR +   +LA WNAM+ G+
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF 441

Query: 555 AQHGCYHEVSNLFNKMSKFGV-KPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           A HG       LF++M   G+ +PD+IT++ VL++C  AGLV     Y   M   +G+ P
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           +L+HY C++DLL R    E A++ +  M + PD  IW SLLSAC  +G ++ G     +L
Sbjct: 502 KLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERL 561

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
            +L+P+N   +VLLSN+YA AG W+DV ++R  + +K + K PG + I + G  H F  G
Sbjct: 562 FQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVG 621

Query: 734 DSSHSQSKEIYK---ELIKLYE 752
           D  H +   IYK   E+ KL E
Sbjct: 622 DKFHPECNNIYKMLNEVDKLLE 643



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 223/488 (45%), Gaps = 52/488 (10%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHF---TKFADFRRAFRFLFDTQNR---DIITYNALIS 54
           QI+SL+IK G +    + + LI HF   +   D   A     + Q     ++  +N+LI 
Sbjct: 46  QIHSLIIKTGLNNTVFVQSKLI-HFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 55  GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSS 111
           G +       +L LF R+ Y G++P++ TF  L K+C    +  E + +H   LKL    
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 112 RVYLVSGFIENYAKSGEIVSAEMCF-----RD---------------CLD---------- 141
             ++ +  I  YA  GE+  A + F     RD               CLD          
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 142 -LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHG 200
             D V++ AM+ GYV +G F+++   F EM+   +  N+ ++  VL A    + GE    
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 201 FGVKV---GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
            G  V   GF S +   L NA++++Y +CG+   A ++FD I E DV+SW+  I      
Sbjct: 285 IGSWVRDNGFGSNL--QLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342

Query: 258 V---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSI 313
               EA  LF+ +  ++ + N+ T + +L +      L  GK + A+  K +      S+
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402

Query: 314 GNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL 373
             +LI MY KCG +  A  +F  +  ++  SWN+M++G++ +G   +AL +F  M+   L
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462

Query: 374 I-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNES 431
             P+  T   +L A + +  +    Q    +I+  G         C+I    +     E+
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522

Query: 432 KRVLSEID 439
           + ++  ++
Sbjct: 523 EILMKNME 530



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 220/495 (44%), Gaps = 58/495 (11%)

Query: 46  IITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCL 105
           ++T +   S L     S P  K+ ++  Y           +L++ C ++   + +H + +
Sbjct: 3   LVTSSPSPSILHFLPASDPPYKILEQHPYL----------NLLEKCKNINTFKQIHSLII 52

Query: 106 KLGFSSRVYLVSGFIE--NYAKSGEIVSAEMCFRDCLD--LDNV-AYTAMVCGYVWNGEF 160
           K G ++ V++ S  I     + SG++  A   F +       NV  + +++ GY  +   
Sbjct: 53  KTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSP 112

Query: 161 DKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNN 217
             S  +F  M   G++ N  +   +  +    K   EG+Q+H   +K+        H++ 
Sbjct: 113 LSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLAL--HFNPHVHT 170

Query: 218 AIMNLYVRCGQ----KL---------------------------DAVKMFDEITEPDVVS 246
           +++++Y   G+    +L                           DA ++FDEI   DVVS
Sbjct: 171 SVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVS 230

Query: 247 WSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  I+         EA   F +++  +   N+ TM+ +LS+ G  R    GK I ++  
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
             GF   + + NALI MY KCG+ + AR +FD +  KD +SWN+MI GYS    + +AL 
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTY 422
           +F  ML  ++ PN  T   IL A +   +L     VH++I K+     + S+ + LI  Y
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMY 410

Query: 423 GKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY-RTIWGSCREVNGSTF 481
            KC  +  ++RV   +  +N    NA+ S          AL L+   +       +  TF
Sbjct: 411 AKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITF 470

Query: 482 SIVLKAC--AAMTDL 494
             VL AC  A + DL
Sbjct: 471 VGVLSACTQAGLVDL 485



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
           + N  TF  + K+C       +GK +H  ALK     +  V ++VI MY   G ++ A+ 
Sbjct: 128 QPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARL 187

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F K        + A++ GY   GC  +   LF+++    VK D +++ A+++    +G 
Sbjct: 188 VFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP---VK-DVVSWNAMISGYVQSGR 243

Query: 595 VREA 598
             EA
Sbjct: 244 FEEA 247


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 173/535 (32%), Positives = 300/535 (56%), Gaps = 12/535 (2%)

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
           Y R  + +DA+ +FDE+   DVVSW+  I+     VE   +   ++  D ++ E ++++ 
Sbjct: 76  YTRSNRLVDALNLFDEMPVRDVVSWNSMISGC---VECGDMNTAVKLFD-EMPERSVVSW 131

Query: 283 LSSVGGERILRAGK--QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
            + V G    R+GK  Q +   Y++   +  +  N+++  Y + G+V+DA  +F  +  K
Sbjct: 132 TAMVNG--CFRSGKVDQAERLFYQMPVKDTAA-WNSMVHGYLQFGKVDDALKLFKQMPGK 188

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           + +SW +MI G  +N    +ALD+F +ML   +         ++ A +N+ +    +QVH
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
             IIK GFL ++ + + LIT Y  C  + +S++V  E   +      AL S       H 
Sbjct: 249 GLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHE 308

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           +AL ++  +  +    N STF+  L +C+A+  L+ GK +H +A+K   + D FV ++++
Sbjct: 309 DALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLV 368

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
            MY   G + DA   F KI + S+  WN++++G AQHG       +F +M +   +PDEI
Sbjct: 369 VMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI 428

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSD-LHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           T+  +L++C H G + + R     MS  ++ +  +++HY C+VD+LGR G L+ A+  I+
Sbjct: 429 TFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIE 488

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +M + P+  +W +LLSAC ++ ++D G  A + +  L   + + YVLLSN+YASAG W++
Sbjct: 489 RMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSN 548

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           V KLR +MK+  + K+PG SW+ + G  H F++GD  H     IY++L  L E +
Sbjct: 549 VSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFLREKL 601



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 211/457 (46%), Gaps = 33/457 (7%)

Query: 17  LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQG 76
           L T +I+ +T+      A     +   RD++++N++ISG         A+KLFD +  + 
Sbjct: 68  LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGF---IENYAKSGEIV 130
           +     +++++V  C   G + + E       +L +   V   + +   +  Y + G++ 
Sbjct: 128 V----VSWTAMVNGCFRSGKVDQAE-------RLFYQMPVKDTAAWNSMVHGYLQFGKVD 176

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
            A   F+     + +++T M+CG   N    ++ ++F  M    ++      T V+ A  
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236

Query: 191 DVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           +      G Q+HG  +K+GFL     +++ +++  Y  C +  D+ K+FDE     V  W
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYE--EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294

Query: 248 SERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           +  ++         +A  +F  +  N    N+ T  + L+S      L  GK++     K
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
           +G      +GN+L+ MY   G VNDA S+F  +  K  VSWNS+I G +++G    A  +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI---SCLITT 421
           F  M+  +  P+  T   +L A S+   L++  ++  + + SG    D  I   +C++  
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDI 473

Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            G+C  L E++    E+ ++  V  N +  + + ++C
Sbjct: 474 LGRCGKLKEAE----ELIERMVVKPNEMVWLALLSAC 506



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 151/305 (49%), Gaps = 15/305 (4%)

Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
           VS+   +I+ Y +  ++ DA ++FD +  +D VSWNSMI+G  E G  N A+ +F  M E
Sbjct: 66  VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125

Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
            S++    +  +++     S  + QA ++   +     + D +  + ++  Y +   +++
Sbjct: 126 RSVV----SWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDD 177

Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
           + ++  ++  KN +    +   L       EAL+L++ +   C +     F+ V+ ACA 
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237

Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
                 G  +H L +K  +  + +V +++I  Y  C  I D+++ F +   + +A W A+
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297

Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
           + GY+ +  + +  ++F+ M +  + P++ T+ + L SC   G +   +       ++HG
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK-------EMHG 350

Query: 611 LIPQL 615
           +  +L
Sbjct: 351 VAVKL 355



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 129/269 (47%), Gaps = 25/269 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           Q++ L+IK G   +  +S +LI+ +    +  D R+ F    +  +  +  + AL+SG +
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD---EKVHEQVAVWTALLSGYS 302

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVY 114
              +   AL +F  +    + P+  TF+S + +C   G+L   + +HGV +KLG  +  +
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + +  +  Y+ SG +  A   F        V++ +++ G   +G    +  +F +M  L 
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422

Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAI------MNLYVR 225
            E +E + T +L A      +++G ++        ++S   NH++  I      +++  R
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKL------FYYMSSGINHIDRKIQHYTCMVDILGR 476

Query: 226 CGQKLDAVKMFDE-ITEPDVVSWSERIAA 253
           CG+  +A ++ +  + +P+ + W   ++A
Sbjct: 477 CGKLKEAEELIERMVVKPNEMVWLALLSA 505


>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19220, mitochondrial; Flags: Precursor
          Length = 951

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 209/742 (28%), Positives = 376/742 (50%), Gaps = 27/742 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++ L I+ G   D  L   L++ + K  +   A       ++RDI+++N +++       
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              +L+ F  +   G   D  TFS ++ AC S++E    E +HG+ +K G+S   ++  G
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329

Query: 119 --FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              I  Y+K G+  +AE  F + +  D ++  A++ G+  NG F+++  +  +M+S+   
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389

Query: 177 LNEF----SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +     S+T++ G     +EG  +HG+ V++   S     +N +++++Y +CG    A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVIN-SVIDMYGKCGLTTQA 448

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEY---TMINLLSSV 286
             +F   T  D+VSW+  I+A + +G   +A  LFK++  +++  +++   T++ +L+S 
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSC 507

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI-FKDSVSW 345
                L  GK +  +  K+GF + +   N++I+MY  C  +  A    + +   +D  SW
Sbjct: 508 DSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSW 567

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ---VHSH 402
           NS+I+G + +G   ++L  F  M     I   + + ++L  +S S +L   +Q    H  
Sbjct: 568 NSVISGCASSGHHLESLRAFQAMSREGKIR--HDLITLLGTISASGNLGLVLQGRCFHGL 625

Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            IKS   LD  + + LIT YG+C  +  + +V   I   N    N + S L       E 
Sbjct: 626 AIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREV 685

Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
            +L+R +     E N  TF  +L A   +     G   HC  ++  +  + FV +A++DM
Sbjct: 686 FQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDM 742

Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEIT 581
           Y  CG +E   + FR    +S++ WN+++  +  HG   +   LF ++S    ++P++ +
Sbjct: 743 YSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSS 802

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           ++++L++C H+G + E  +Y   M +  G+ P  EH   IVD+LGR G L  A   I  +
Sbjct: 803 FISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGI 862

Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
             P  A +W +LLSAC  +G+  LG      L E++PDN S Y+ L+N Y   G W +  
Sbjct: 863 GEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAV 922

Query: 702 KLRKEMKEKFLCKEPGYSWIHV 723
           +LRK +++  L K PGYS I V
Sbjct: 923 RLRKMVEDNALKKLPGYSVIDV 944



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 184/738 (24%), Positives = 350/738 (47%), Gaps = 38/738 (5%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++   +K G   D   S+ L++ + +  +   +     + + +D+I +N++I+ L +  +
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLVSG 118
              A+ LF  + ++G   D+ T      A  SL   ++  ++H + ++ G      L + 
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            +  YAK   + SAE  F      D V++  ++   + NG   KS + F  M   G E +
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288

Query: 179 EFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             + + V+ A   ++E   GE +HG  +K G+       + N+I+++Y +CG    A  +
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348

Query: 236 FDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFND-FQINEYTMINLLSSVGGERI 291
           F+E+   DV+S +  +   A +G+  EAFG+   ++  D  Q +  T++++ S  G    
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408

Query: 292 LRAGKQIQAFCYKVGFM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            R G+ +  +  ++      + + N++I MYGKCG    A  +F     +D VSWNSMI+
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468

Query: 351 GYSENGFFNQALDMFCHML------EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
            +S+NGF ++A ++F  ++      +FSL     T+ +IL +  +S SL     VH  + 
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSL----STVLAILTSCDSSDSLIFGKSVHCWLQ 524

Query: 405 KSGFLLDDSMISC--LITTYGKCNALNES-KRVLSEIDKKNAVHINALASVLVYASCHAE 461
           K GF   D+M+S   +I  Y  C  L  +  R+ +  + ++    N++ S    +  H E
Sbjct: 525 KLGF--GDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLE 582

Query: 462 ALELYRTI--WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAV 519
           +L  ++ +   G  R  +  T    + A   +  + QG+  H LA+K+  + D  +++ +
Sbjct: 583 SLRAFQAMSREGKIRH-DLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTL 641

Query: 520 IDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
           I MY +C  IE A + F  I   +L  WN ++   +Q+    EV  LF  +    ++P+E
Sbjct: 642 ITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNE 698

Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
           IT++ +L++    G          C     G        A +VD+    G+LE   M + 
Sbjct: 699 ITFVGLLSASTQLGSTSYG-MQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETG-MKVF 756

Query: 640 QMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL---LELQPDNESTYVLLSNLYASAGM 696
           +         W S++SA   +G  +  +    +L    E++P N+S+++ L +  + +G 
Sbjct: 757 RNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP-NKSSFISLLSACSHSGF 815

Query: 697 WNDVGKLRKEMKEKFLCK 714
            ++     K+M+EKF  K
Sbjct: 816 IDEGLSYYKQMEEKFGVK 833



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           + +  F  K G ++ ++  + L++ YG+ G++  +  +FD L  KD + WNSMI   ++N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G +  A+ +F  M+      +  T+     A+S+    ++   +H   I++G + D S+ 
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + L+  Y K   L+ ++ V + ++ ++ V  N + +  +      ++L+ ++++ GS +E
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286

Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQD--IFVESAVIDMYCKCGTIEDAK 533
            +  TFS V+ AC+++ +L  G+++H L +K+ Y  +  + V +++I MY KCG  E A+
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346

Query: 534 RAFRK-ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCH 591
             F + +CRD ++  NA++ G+A +G + E   + N+M     ++PD  T +++ + C  
Sbjct: 347 TVFEELVCRDVISS-NAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405

Query: 592 AGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
               RE R        +      LE    ++D+ G+ GL   A++   +     D   W 
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF-KTTTHRDLVSWN 464

Query: 652 SLLSA 656
           S++SA
Sbjct: 465 SMISA 469



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 2/179 (1%)

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
           VL++    T+ E  +++HC ALK    QD+   S ++  Y + G +  +   F ++    
Sbjct: 93  VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLS 603
           +  WN+M+    Q+G Y     LF +M   G + D  T L   ++     L R+  + L 
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKC-SMLH 211

Query: 604 CMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
           C++   GL+        +++L  +   L  A+     M    D   W ++++ C   G+
Sbjct: 212 CLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME-HRDIVSWNTIMTKCLANGH 269


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 205/639 (32%), Positives = 315/639 (49%), Gaps = 78/639 (12%)

Query: 186 LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
           LGAS  VK    IHG  ++   L      L+N I++ Y      + A ++FD I +P++ 
Sbjct: 16  LGASRHVK---MIHGNIIRT--LPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLF 70

Query: 246 SWSERIAAAC------------------DGV------EAFGL--------------FKDL 267
           SW+  + A                    DGV      E + L               KD 
Sbjct: 71  SWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDF 130

Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
             N  ++   TM+ L SS G    +  GKQI     K+GF   + +G+ L+ MY K G +
Sbjct: 131 SSNLTRVTLMTMLKLSSSNGH---VSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187

Query: 328 NDARSIFDYL------------------------------IFKDSVSWNSMIAGYSENGF 357
           +DA+ +F  L                              + KDSVSW++MI G ++NG 
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGM 247

Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
             +A++ F  M    L  + Y   S+L A     ++    Q+H+ II++       + S 
Sbjct: 248 EKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSA 307

Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
           LI  Y KC  L+ +K V   + +KN V   A+           EA++++  +  S  + +
Sbjct: 308 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPD 367

Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
             T    + ACA ++ LE+G   H  A+ A     I V ++++ +Y KCG I+D+ R F 
Sbjct: 368 HYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 538 KI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
           ++  RD ++ W AM+  YAQ G   E   LF+KM + G+KPD +T   V+++C  AGLV 
Sbjct: 428 EMNVRDEVS-WTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVE 486

Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
           + + Y   M + +G++P   HY+C++DL  R G +E A   I+ MP  PDA  W +LLSA
Sbjct: 487 KGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSA 546

Query: 657 CTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEP 716
           C   GN+++G  A   L+EL P + + Y LLS++YAS G W+ V +LR+ MKEK + KEP
Sbjct: 547 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEP 606

Query: 717 GYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           G SWI   G  H F A D S   S +IY +L +LY+ ++
Sbjct: 607 GQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKII 645



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 243/524 (46%), Gaps = 66/524 (12%)

Query: 79  PDAFTFSSLVKACG----SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           P+ F  +++V A      S+    +  G+     FS    L++     Y+KSG +   E 
Sbjct: 36  PETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLA-----YSKSGHLSEMER 90

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-VEMRSLGLELNEFSLTAVLGASFD-- 191
            F    D D V +  ++ GY  +G    + + +   M+     L   +L  +L  S    
Sbjct: 91  TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNG 150

Query: 192 -VKEGEQIHGFGVKVGFLS--------------------------GVCNH---LNNAIMN 221
            V  G+QIHG  +K+GF S                          G+ +    + N +M 
Sbjct: 151 HVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMG 210

Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYT 278
             + CG   DA+++F  + E D VSWS  I   A +G+  EA   F++++    ++++Y 
Sbjct: 211 GLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYP 269

Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
             ++L + GG   +  G+QI A   +    + + +G+ALI MY KC  ++ A+++FD + 
Sbjct: 270 FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329

Query: 339 FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
            K+ VSW +M+ GY + G   +A+ +F  M    + P+ YT+   + A +N  SL++  Q
Sbjct: 330 QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQ 389

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
            H   I +G +   ++ + L+T YGKC  +++S R+ +E++ ++ V   A+ S       
Sbjct: 390 FHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGR 449

Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE-- 516
             EA++L+  +     + +G T + V+ AC+    +E+G+         RY + +  E  
Sbjct: 450 AVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ---------RYFELMINEYG 500

Query: 517 --------SAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMM 551
                   S +ID++ + G IE+A      +  R    GW  ++
Sbjct: 501 IVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLL 544



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 210/445 (47%), Gaps = 46/445 (10%)

Query: 28  FADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL----RYQGLRPDAFT 83
            ++  R F  L D   RD +T+N LI G +     G A+K ++ +         R    T
Sbjct: 85  LSEMERTFEKLPD---RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMT 141

Query: 84  FSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF------- 136
              L  + G +   + +HG  +KLGF S + + S  ++ Y+K G I  A+  F       
Sbjct: 142 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRN 201

Query: 137 -----------------RDCLDL------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
                             D L L      D+V+++AM+ G   NG   ++ E F EM+  
Sbjct: 202 TVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIE 261

Query: 174 GLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
           GL+++++   +VL   G    + +G QIH   ++      +  ++ +A++++Y +C    
Sbjct: 262 GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI--YVGSALIDMYCKCKCLH 319

Query: 231 DAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A  +FD + + +VVSW+  +          EA  +F D++ +    + YT+   +S+  
Sbjct: 320 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA 379

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               L  G Q        G +  +++ N+L+++YGKCG ++D+  +F+ +  +D VSW +
Sbjct: 380 NISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTA 439

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS- 406
           M++ Y++ G   +A+ +F  M++  L P+G T+  ++ A S +  +++  +    +I   
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEY 499

Query: 407 GFLLDDSMISCLITTYGKCNALNES 431
           G +  +   SC+I  + +   + E+
Sbjct: 500 GIVPSNGHYSCMIDLFSRSGRIEEA 524



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 178/361 (49%), Gaps = 14/361 (3%)

Query: 38  LFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL--- 94
           LF    +D ++++A+I GLA+      A++ F  ++ +GL+ D + F S++ ACG L   
Sbjct: 224 LFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAI 283

Query: 95  QENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGY 154
            +   +H   ++      +Y+ S  I+ Y K   +  A+  F      + V++TAMV GY
Sbjct: 284 NDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY 343

Query: 155 VWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGV 211
              G   ++ ++F++M+  G++ + ++L   + A  ++   +EG Q HG  +  G +  +
Sbjct: 344 GQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYI 403

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLR 268
              ++N+++ LY +CG   D+ ++F+E+   D VSW+  ++A       VEA  LF  + 
Sbjct: 404 T--VSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMV 461

Query: 269 FNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
               + +  T+  ++S+     ++  G++  +    + G +      + +I ++ + G++
Sbjct: 462 QLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRI 521

Query: 328 NDARSIFDYLIFK-DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSL-IPNGYTMASILE 385
            +A    + + F+ D++ W ++++     G           ++E     P GYT+ S + 
Sbjct: 522 EEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 581

Query: 386 A 386
           A
Sbjct: 582 A 582



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 127/265 (47%), Gaps = 18/265 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +I+        + + LI  + K      A       + ++++++ A++ G  +  
Sbjct: 288 QIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 347

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
           ++G A+K+F  ++  G+ PD +T    + AC    SL+E    HG  +  G    + + +
Sbjct: 348 RAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSN 407

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y K G+I  +   F +    D V++TAMV  Y   G   ++ ++F +M  LGL+ 
Sbjct: 408 SLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKP 467

Query: 178 NEFSLTAVLGASFD---VKEGEQ-----IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
           +  +LT V+ A      V++G++     I+ +G+         N   + +++L+ R G+ 
Sbjct: 468 DGVTLTGVISACSRAGLVEKGQRYFELMINEYGIV------PSNGHYSCMIDLFSRSGRI 521

Query: 230 LDAVKMFDEIT-EPDVVSWSERIAA 253
            +A+   + +   PD + W+  ++A
Sbjct: 522 EEAMGFINGMPFRPDAIGWTTLLSA 546



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +S  +K C  +      K IH   ++     + F+ + ++  Y    +   A+R F  I 
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA-R 599
           + +L  WN +++ Y++ G   E+   F K+       D +T+  ++     +GLV  A +
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVK 121

Query: 600 TYLSCMSDL 608
            Y + M D 
Sbjct: 122 AYNTMMKDF 130


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 195/655 (29%), Positives = 313/655 (47%), Gaps = 47/655 (7%)

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
           LRY GL P    +     ACG        H +  ++     V   +  + +Y   G    
Sbjct: 43  LRYHGLHPLFMVYC----ACGRPSS---AHNLLAQMPQPPPVSFSNSLLRSYTGLG---- 91

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
              C R+ L +    Y+AM         FD     F      GL L              
Sbjct: 92  ---CHREALAV----YSAMRA-------FDHLTFPFAAKACAGLRLG------------- 124

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
            + G  +H   +  GF  G   ++ NA++++Y+ CG    A  +F  +    VVSW+  I
Sbjct: 125 -RHGRAVHCRALAAGF--GGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVI 181

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           A          A  +F ++  +   I+  T++++L +    + L  G+ +       G  
Sbjct: 182 AGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLG 241

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIF-KDSVSWNSMIAGYSENGFFNQALDMFCH 367
           + V++ NALI MYGKC  + DAR +FD+    KD VSW +MI  Y  N    +A+ + C 
Sbjct: 242 DYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQ 301

Query: 368 ML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           ML   +  PNG TM  +L A ++  S K A   H+  I+ G   D ++ + LI  Y +C 
Sbjct: 302 MLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCG 361

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
            +   +  L E     A   NA  S    +    +A+EL++ +       + +T + +L 
Sbjct: 362 KMKLMRLTL-ERGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILP 420

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           A A   DL++GK IHC  L   + +   + + +ID+Y K G ++ A   F+ +    +  
Sbjct: 421 AYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA 480

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           W  ++ GY+ HG       L+++M + G KP+ +T   +L +C HAG++ E       M 
Sbjct: 481 WTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMR 540

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
           ++HGL+P  EHY+C+VD+LGR G +E A   I  MP  P   +W +LL AC ++ N++ G
Sbjct: 541 NVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFG 600

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
            +A  +L +L P+N  +YVLL N+YA+A  W DV  +R+ M E+ L KEPG S +
Sbjct: 601 EVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLV 655



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 207/444 (46%), Gaps = 29/444 (6%)

Query: 14  DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
           D  +   LIS +    D   A       +NR ++++NA+I+G  +   +  AL++F  + 
Sbjct: 142 DTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMA 201

Query: 74  YQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
             G+  D  T  S++ AC     L     VH +    G    V + +  I+ Y K   + 
Sbjct: 202 ADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLE 261

Query: 131 SAEMCFRDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL--------NEFS 181
            A   F  C  D D V++TAM+  YV N   D++ E      SLG ++        N  +
Sbjct: 262 DARRVFDHCKHDKDVVSWTAMIGAYVLN---DRAFEAI----SLGCQMLMSGAAWPNGVT 314

Query: 182 LTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
           +  +L A   +  G+     H   +++G  S +   +  A+++ Y RCG K+  +++  E
Sbjct: 315 MVYLLSACASMPSGKHAKCTHALCIRLGLKSDIA--VETALIDAYARCG-KMKLMRLTLE 371

Query: 239 ITEPDVVSWSERIAA-ACDGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
                  +W+  ++     G E  A  LFK +     + +  TM ++L +      L+ G
Sbjct: 372 RGSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEG 431

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           K I  F   +GF+    I   LI +Y K G ++ A ++F +L  KD V+W ++IAGYS +
Sbjct: 432 KNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIH 491

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSM 414
           G    A+ ++  M+E    PN  T+A++L A S++  + + ++V   +    G + +   
Sbjct: 492 GHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEH 551

Query: 415 ISCLITTYGKCNALNESKRVLSEI 438
            SCL+   G+   + E+ R++ ++
Sbjct: 552 YSCLVDMLGRAGRIEEAHRLIQDM 575



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 9/258 (3%)

Query: 3   YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
           ++L I+ G   D  + T LI  + +    +   R   +  +    T+NA +SG     + 
Sbjct: 335 HALCIRLGLKSDIAVETALIDAYARCGKMK-LMRLTLERGSWRAETWNAALSGYTVSGRE 393

Query: 63  GPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGF 119
             A++LF R+  + +RPD+ T +S++ A      L+E + +H   L LGF     + +G 
Sbjct: 394 KKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGL 453

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
           I+ Y+K+G++ +A   F+   + D VA+T ++ GY  +G    +  ++  M   G + N 
Sbjct: 454 IDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNT 513

Query: 180 FSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
            ++  +L A   +  + EG ++      V  L     H  + ++++  R G+  +A ++ 
Sbjct: 514 VTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHY-SCLVDMLGRAGRIEEAHRLI 572

Query: 237 DEIT-EPDVVSWSERIAA 253
            ++  EP    W   + A
Sbjct: 573 QDMPFEPSTSVWGALLGA 590



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 45/91 (49%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            I+  L+  G      ++T LI  ++K  D   A+        +D++ +  +I+G +   
Sbjct: 433 NIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHG 492

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
            +  A+ L+DR+   G +P+  T ++L+ AC
Sbjct: 493 HARTAILLYDRMVESGGKPNTVTIATLLYAC 523


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 193/676 (28%), Positives = 334/676 (49%), Gaps = 10/676 (1%)

Query: 83  TFSSLV-KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
            FSSL+ +   +L   + +H   +K   S+  +L +  I  Y+  G +  A   F  C  
Sbjct: 48  VFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSL 107

Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGE---QI 198
            +     AM+ G++ N +  +   +F  M S  +E+N ++    L A  D+ + E   +I
Sbjct: 108 PETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEI 167

Query: 199 HGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG- 257
               V+ GF   +  ++ ++++N  V+ G   DA K+FD + E DVV W+  I       
Sbjct: 168 IRAAVRRGFHLHL--YVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKG 225

Query: 258 --VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
              E+  +F ++     + +  TM NLL + G   + + G    ++   +G    V +  
Sbjct: 226 LFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLT 285

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           +L+ MY   G    A  +FD +  +  +SWN+MI+GY +NG   ++  +F  +++     
Sbjct: 286 SLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGF 345

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           +  T+ S++   S +  L+    +HS II+        + + ++  Y KC A+ ++  V 
Sbjct: 346 DSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVF 405

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
             + KKN +   A+   L       +AL+L+  +       N  T   ++  CA +  L 
Sbjct: 406 GRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLT 465

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR-KICRDSLAGWNAMMMGY 554
           +G+ +H   ++  Y  D  + SA+IDMY KCG I  A++ F  +     +   N+M+MGY
Sbjct: 466 KGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGY 525

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
             HG       ++++M +  +KP++ T++++LT+C H+GLV E +     M   H + PQ
Sbjct: 526 GMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQ 585

Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
            +HYAC+VDL  R G LE A   + QMP  P   + ++LLS C  + N ++G+    +L+
Sbjct: 586 HKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLI 645

Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
            L   N   YV+LSN+YA A  W  V  +R  M+ + + K PGYS I VG   + F+A D
Sbjct: 646 SLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASD 705

Query: 735 SSHSQSKEIYKELIKL 750
            SH    +IY+ L  L
Sbjct: 706 DSHPSWADIYQLLENL 721



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/553 (23%), Positives = 261/553 (47%), Gaps = 21/553 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFC 60
           I++ +IKN    +  L+  LI  ++       A R +FD  +  +    NA+I+G  R  
Sbjct: 66  IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHA-RNVFDQCSLPETAVCNAMIAGFLRNQ 124

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
           Q     +LF  +    +  +++T    +KAC  L ++E+   +    ++ GF   +Y+ S
Sbjct: 125 QHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +    K G +  A+  F    + D V + +++ GYV  G F +S ++F+EM   GL  
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  ++  +L   G S   K G   H + + +G  + V   +  +++++Y   G    A  
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDV--FVLTSLVDMYSNLGDTGSAAL 302

Query: 235 MFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +FD +    ++SW+  I+         E++ LF+ L  +    +  T+++L+        
Sbjct: 303 VFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSD 362

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  G+ + +   +      + +  A++ MY KCG +  A  +F  +  K+ ++W +M+ G
Sbjct: 363 LENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVG 422

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
            S+NG+   AL +FC M E  +  N  T+ S++   ++  SL +   VH+H I+ G+  D
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFD 482

Query: 412 DSMISCLITTYGKCNALNESKRVL-SEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
             + S LI  Y KC  ++ ++++  +E   K+ +  N++            AL +Y  + 
Sbjct: 483 AVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMI 542

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE----SAVIDMYCKC 526
               + N +TF  +L AC+    +E+GKA   L      D D+  +    + ++D++ + 
Sbjct: 543 EERLKPNQTTFVSLLTACSHSGLVEEGKA---LFHSMERDHDVRPQHKHYACLVDLHSRA 599

Query: 527 GTIEDAKRAFRKI 539
           G +E+A    +++
Sbjct: 600 GRLEEADELVKQM 612



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 211/449 (46%), Gaps = 13/449 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           +I    ++ G HL   + +++++   K      A +       +D++ +N++I G  +  
Sbjct: 166 EIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKG 225

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
               ++++F  +   GLRP   T ++L+KACG     ++    H   L LG  + V++++
Sbjct: 226 LFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLT 285

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+  G+  SA + F        +++ AM+ GYV NG   +S  +F  +   G   
Sbjct: 286 SLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGF 345

Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           +  +L +++     + D++ G  +H   ++    S +   L+ AI+++Y +CG    A  
Sbjct: 346 DSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLV--LSTAIVDMYSKCGAIKQATI 403

Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           +F  + + +V++W+  +          +A  LF  ++      N  T+++L+        
Sbjct: 404 VFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGS 463

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWNSMIA 350
           L  G+ + A   + G+     I +ALI MY KCG+++ A  +F +    KD +  NSMI 
Sbjct: 464 LTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIM 523

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV-HSHIIKSGFL 409
           GY  +G    AL ++  M+E  L PN  T  S+L A S+S  +++   + HS        
Sbjct: 524 GYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVR 583

Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEI 438
                 +CL+  + +   L E+  ++ ++
Sbjct: 584 PQHKHYACLVDLHSRAGRLEEADELVKQM 612


>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
          Length = 667

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/545 (32%), Positives = 287/545 (52%), Gaps = 11/545 (2%)

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQ 273
           N I++ Y + G   +A+K+FD  ++ D  SW+  ++         E    F  +R +  +
Sbjct: 85  NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
            + +T   ++        L  G+Q+ A   KV       IG  L+ MY + G++ DAR +
Sbjct: 145 PDNFTYAIIIPCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKV 200

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           FD +  +  V+WN+MI+ YS+ G  ++++ +F  +    +  + YT A +L   +    +
Sbjct: 201 FDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQV 260

Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
            +AMQVHS II+ GF  D    + L+  Y KC  +  + R+  EI  ++ V    +    
Sbjct: 261 FEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGF 320

Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK-ARYDQD 512
           + +    EA+ L+  +     E N  TF  +L ACA     ++G+  H L LK      D
Sbjct: 321 LQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGAD 380

Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-- 570
           + V SAV+DMY KCG + DA RAF+++    +A WN ++ GYAQ+G   +   L+N+M  
Sbjct: 381 VVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVL 440

Query: 571 -SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
               G+ P+E+T++ VL +C H GL++E  +Y   M D H + P  EHY C+VDLLGR G
Sbjct: 441 LGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAG 500

Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSN 689
           LL+ A+  I  +PI PD  +W +LL AC ++G++ +       L   +P N S YVLL+N
Sbjct: 501 LLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLAN 560

Query: 690 LYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIK 749
            Y   G W +  ++R+ M+ + + K  G SW+ +G   H F AGD  H Q +   + L +
Sbjct: 561 SYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVASQVLPR 620

Query: 750 LYEHM 754
           LY  M
Sbjct: 621 LYLQM 625



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 207/438 (47%), Gaps = 22/438 (5%)

Query: 19  TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
            T++S + KF     A +    T  RD  ++N ++SG  +  + G  L  F ++R   +R
Sbjct: 85  NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144

Query: 79  PDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
           PD FT++ ++  C  L   + VH   +K+      ++ +  +  YA+ GEI  A   F  
Sbjct: 145 PDNFTYAIIIPCC-DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDG 203

Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEG 195
                 V + AM+  Y   G  DKS  +F ++   G+  +E++   VL    A + V E 
Sbjct: 204 MPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEA 263

Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC 255
            Q+H   ++ GF S      NNA++NLY +CG    A ++F+EI + DVVSW+  I    
Sbjct: 264 MQVHSLIIERGFCSD--RFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFL 321

Query: 256 DG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV-V 311
                 EA  LF  ++  D + N +T   LL +       + G+       K G +   V
Sbjct: 322 QSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADV 381

Query: 312 SIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEF 371
            +G+A++ MY KCG++ DA   F  +  +D  SWN +I GY++NG   +AL ++  M+  
Sbjct: 382 VVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLL 441

Query: 372 ---SLIPNGYTMASILEAVSNSKSLKQAMQ-----VHSHIIKSGFLLDDSMISCLITTYG 423
               + PN  T   +L A S++  LK+        V  H+IK          +C++   G
Sbjct: 442 GPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKP----TAEHYTCMVDLLG 497

Query: 424 KCNALNESKRVLSEIDKK 441
           +   L E++ ++  +  K
Sbjct: 498 RAGLLQEAEALILALPIK 515



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 184/370 (49%), Gaps = 15/370 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q+++ ++K    LD  + T L+  + +  +   A +      +R ++T+NA+IS  +++ 
Sbjct: 164 QVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYG 223

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVS 117
           +   ++ LF +L  +G+  D +T++ ++    A   + E   VH + ++ GF S  +  +
Sbjct: 224 RGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNN 283

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             +  Y+K G + SA   F +  D D V++T ++ G++ +G  +++  +F +M+   +E 
Sbjct: 284 ALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEP 343

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
           N F+   +LGA  D    ++G   HG  +K G L G    + +A++++Y +CG+  DA++
Sbjct: 344 NSFTFGGLLGACADANAFQKGRHFHGLVLKFGLL-GADVVVGSAVVDMYSKCGEMGDALR 402

Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRF---NDFQINEYTMINLLSSVGG 288
            F E+ E D+ SW+  I   A    G++A  L+ ++     +    NE T + +L +   
Sbjct: 403 AFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSH 462

Query: 289 ERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWN 346
             +L+ G    +    K            ++ + G+ G + +A ++   L  K D+V W 
Sbjct: 463 NGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWG 522

Query: 347 SMIAGYSENG 356
           +++     +G
Sbjct: 523 ALLGACKLHG 532


>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
          Length = 1817

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 168/507 (33%), Positives = 283/507 (55%), Gaps = 2/507 (0%)

Query: 250  RIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
            R A   +  EA   F  +  +  +  ++ +   L+S         G QI A   + GF +
Sbjct: 1290 RPAKHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFED 1349

Query: 310  VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
             + + +AL+ +Y KC  + DA+ +FD +   D VSW S+I+G+S+NG   +A+  F  ML
Sbjct: 1350 NLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEML 1409

Query: 370  EFSLIPNGYTMASILEAVSNSKSL-KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               + PN  T  S + A +  +++  Q   +H+H++K GF +   ++SCLI  Y KC  +
Sbjct: 1410 GSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRI 1469

Query: 429  NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            +++  +     +++ +  N++ S         EAL+L+  +  +       T + +L AC
Sbjct: 1470 DQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNAC 1529

Query: 489  AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
             ++T L+QG+ +H L  K   + ++FV SA++DMY KCG+I++A+  F +    +   W 
Sbjct: 1530 GSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWT 1589

Query: 549  AMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
            +M+ GYAQ G   E   LF ++  + G  PD I + AVLT+C HAG + +   Y + M  
Sbjct: 1590 SMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRR 1649

Query: 608  LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
             +GL+P L+ YAC+VDL  R G L  AK  ++  P  P++ +W S LS+C +YG  +LG 
Sbjct: 1650 DYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGR 1709

Query: 668  LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
             A  KL +++P + + YV ++++YA AG+W++V ++RK MK+K L K  G+SW+ V    
Sbjct: 1710 EAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRV 1769

Query: 728  HHFYAGDSSHSQSKEIYKELIKLYEHM 754
            H F   D+SH +S++I  EL +L   M
Sbjct: 1770 HVFXVADASHPRSRDICVELERLNLEM 1796



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 211/451 (46%), Gaps = 29/451 (6%)

Query: 165  EVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMN 221
            E F  M + G +  +F L   L +   +     G QIH   ++ GF   +   LN+A+++
Sbjct: 1302 ESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL--FLNSALVD 1359

Query: 222  LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYT 278
            LY +C   +DA ++FD + + D VSW+  I+       G EA   FK++  +  + N  T
Sbjct: 1360 LYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVT 1419

Query: 279  MINLLSSVGG-ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
             ++ +S+  G E I      + A   K+GF     + + LI  Y KCG+++ A  +F   
Sbjct: 1420 YVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTT 1479

Query: 338  IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
            I +D++ +NSMI+GYS+N    +AL +F  M    L P  +T+ SIL A  +   L+Q  
Sbjct: 1480 IERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGR 1539

Query: 398  QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
            QVHS + K G   +  ++S L+  Y KC +++E++ V  +  +KN V   ++ +    + 
Sbjct: 1540 QVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSG 1599

Query: 458  CHAEALELY-RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD--QDIF 514
               E L L+ R +       +   F+ VL AC     L++G   +   ++  Y    D+ 
Sbjct: 1600 RGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKG-IDYFNQMRRDYGLVPDLD 1658

Query: 515  VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG--------YAQHGCYHEVSNL 566
              + ++D+Y + G +  AK        +     N++M G        Y +     E ++ 
Sbjct: 1659 QYACLVDLYVRNGHLRKAKELMEAXPXEP----NSVMWGSFLSSCKLYGEAELGREAADK 1714

Query: 567  FNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
              KM      P    Y+A+ +    AGL  E
Sbjct: 1715 LFKMEPCSTAP----YVAMASIYAQAGLWSE 1741



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 191/399 (47%), Gaps = 19/399 (4%)

Query: 1    QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
            QI++ +I+ G   +  L++ L+  + K      A R     +  D +++ ++ISG ++  
Sbjct: 1337 QIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNG 1396

Query: 61   QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ----ENEIVHGVCLKLGFSSRVYLV 116
            +   A+  F  +    ++P+  T+ S + AC  L+    +  ++H   +KLGF  + ++V
Sbjct: 1397 RGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVV 1456

Query: 117  SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
            S  I+ Y+K G I  A + F   ++ DN+ + +M+ GY  N   +++ ++FVZMR+ GL 
Sbjct: 1457 SCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLX 1516

Query: 177  LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
              + +LT++L   G+   +++G Q+H    K+G  S V   + +A++++Y +CG   +A 
Sbjct: 1517 PTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNV--FVVSALLDMYSKCGSIDEAR 1574

Query: 234  KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGE 289
             +F +  E + V W+  I   A +  G E  GLF+ L   + F  +      +L++    
Sbjct: 1575 CVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHA 1634

Query: 290  RILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNS 347
              L  G           G +  +     L+ +Y + G +  A+ + +    + +SV W S
Sbjct: 1635 GFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGS 1694

Query: 348  MIAG---YSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
             ++    Y E     +A D    M   S  P    MASI
Sbjct: 1695 FLSSCKLYGEAELGREAADKLFKMEPCSTAPY-VAMASI 1732


>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 706

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 192/671 (28%), Positives = 335/671 (49%), Gaps = 28/671 (4%)

Query: 83  TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
           T S L   C S+Q  + +H   +  GF     L S  I+ YA  G +  +   F   +D 
Sbjct: 29  TLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDP 88

Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--SF-DVKEGEQIH 199
           +   + A++      GE +++  V+ +M +  +  +E +   VL +  SF +V  G  IH
Sbjct: 89  NLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIH 148

Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---- 255
           G+ VK+GF   + + +  A+  +Y  C +  +A ++FD+ +  D+  W   +        
Sbjct: 149 GYLVKLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDL-GWPSSLTTEGPQND 205

Query: 256 DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN 315
           +G   F +F  +       + +T  NLL  + G   ++  K +            + +  
Sbjct: 206 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNT 265

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
           A++S+Y K   + DAR +FD +  KD V WN MIA Y+  G   + L++F  M    +  
Sbjct: 266 AVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRS 325

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           + +T   ++ +++  K +    Q H+HI+++G     S+ + LI  Y +C  L+ + ++ 
Sbjct: 326 DLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIF 385

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           + +  K+++                 AL L+  +     + +      +L A   +  LE
Sbjct: 386 NWMTDKSSL----------------TALSLFSKMKSDGIQADFVIMINILPAFVHIGALE 429

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMG 553
             K +H  ++K        + +A++  Y KCG+IE A+R F   KI    L  WN+M+  
Sbjct: 430 NVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISA 489

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
           +A HG + +   L+N+M     KPD++T+L +LT+C ++GLV + + +   M++ +G  P
Sbjct: 490 HANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQP 549

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
             EHYAC+V+LLGR GL+  A   +  MPI PDA +W  LLSAC ++    L   A  KL
Sbjct: 550 SQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKL 609

Query: 674 LELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAG 733
           + ++P N   Y+LLSN+YA+AG W+ V K+R  ++ K L K PG SW+ + G+   F   
Sbjct: 610 INMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVA 669

Query: 734 DSSHSQSKEIY 744
           D +H ++ +IY
Sbjct: 670 DQTHPRAGDIY 680



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 238/510 (46%), Gaps = 31/510 (6%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++  I +G H +P LS+ LI  +        + +      + ++  +NA++  L R+ 
Sbjct: 45  QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYG 104

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
           +S   L ++ ++  + + PD  T+  ++++C S         +HG  +KLGF     + +
Sbjct: 105 ESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVAT 164

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAY-TAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              E Y +  E  +A   F D   + ++ + +++      N   +    VF  M +  L 
Sbjct: 165 ALAEMYEECIEFENAHQLF-DKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLV 223

Query: 177 LNEFS---LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            + F+   L   +     ++  + +H   + V  LSG    +N A+++LY +    +DA 
Sbjct: 224 PDSFTFFNLLRFIAGLNSIQLAKIVHCIAI-VSKLSGDL-LVNTAVLSLYSKLRSLVDAR 281

Query: 234 KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           K+FD++ E D V W+  IAA A +G   E   LFK +  +  + + +T + ++SS+   +
Sbjct: 282 KLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLK 341

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            +  GKQ  A   + G    VS+ N+LI MY +C  ++ A  IF+++  K S++      
Sbjct: 342 CVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSSLT------ 395

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
                     AL +F  M    +  +   M +IL A  +  +L+    +H + +K G   
Sbjct: 396 ----------ALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTS 445

Query: 411 DDSMISCLITTYGKCNALNESKRVLSE--IDKKNAVHINALASVLVYASCHAEALELYRT 468
             S+ + L+ TY KC ++  ++R+  E  ID K+ +  N++ S        ++  +LY  
Sbjct: 446 LPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNR 505

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           +  S  + +  TF  +L AC     +E+GK
Sbjct: 506 MKCSNSKPDQVTFLGLLTACVNSGLVEKGK 535


>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 179/543 (32%), Positives = 296/543 (54%), Gaps = 17/543 (3%)

Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTM 279
           Y  C     +  +FD +   +V  W+  I          EAF LF  +  +D   +++T+
Sbjct: 68  YAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTL 127

Query: 280 INLLSSVGGER-ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLI 338
            + LS V  E   L +GK I     ++GF+    + N+++SMY KCG   ++R +FD + 
Sbjct: 128 -STLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMT 186

Query: 339 FKDSVSWNSMIAGYSENG---FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK-SLK 394
            ++S SWN +IAGY+ +G   F  +  +    M    + P+ YT++S+L      K    
Sbjct: 187 IRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWD 246

Query: 395 QAMQVHSHIIKSGFLL----DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
              ++H +I+K+  +L    D  +  CLI  Y + N +   +RV   +  +N     A+ 
Sbjct: 247 YGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMI 306

Query: 451 SVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
           +  V      EAL L+R +      E N  +   VL AC++ + L  G+ IH  A++   
Sbjct: 307 NGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKEL 366

Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
           + ++ + +A+IDMY KCG+++ A+R F    +C+D+++ W++M+ GY  HG   E   L+
Sbjct: 367 NNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAIS-WSSMISGYGLHGKGQEAILLY 425

Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
           +KM + G++PD IT + +L++C  +GLV E     S + + +G+ P LE +ACIVD+LGR
Sbjct: 426 DKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGR 485

Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
            G L+ A   I  MP+ P   +W +L+S   I+G++++  LA   L++L+P+N S YV +
Sbjct: 486 AGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSI 545

Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           SNLYAS+  W+ V ++R+ MK+K L K PG SWI +   TH FY  D +H  +  IY  L
Sbjct: 546 SNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNML 605

Query: 748 IKL 750
             L
Sbjct: 606 DDL 608



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 229/450 (50%), Gaps = 20/450 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
           Q +S ++  G   + +L+T LI  +          R +FD+ Q++++  +N+LI+G A+ 
Sbjct: 44  QSHSRILSLGLSQNSLLATKLIFAYA-ICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKN 102

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLV 116
                A +LF+++    + PD FT S+L K     G+L   + +HG  +++GF S   + 
Sbjct: 103 RLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVA 162

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  +  Y K G    +   F +    ++ ++  ++ GY  +G  +  +E +  ++ + ++
Sbjct: 163 NSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMD 222

Query: 177 ---LNEFSLTAVL----GASFDVKEGEQIHGFGVKVGFLSGVCN--HLNNAIMNLYVRCG 227
               + ++++++L    G       G ++H + VK   + G+ +  HL   ++++Y R  
Sbjct: 223 EVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSN 282

Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFND-FQINEYTMINLL 283
           + +   ++FD +   +V SW+  I       D  EA  LF+D++  D  + N  +++++L
Sbjct: 283 KVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVL 342

Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDS 342
            +      L +G+QI  F  +      VS+ NALI MY KCG ++ AR +F D  + KD+
Sbjct: 343 PACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDA 402

Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
           +SW+SMI+GY  +G   +A+ ++  ML+  + P+  T   IL A S S  + + + ++S 
Sbjct: 403 ISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSS 462

Query: 403 IIKS-GFLLDDSMISCLITTYGKCNALNES 431
           +I   G      + +C++   G+   L+ +
Sbjct: 463 VINDYGIEPTLEIFACIVDMLGRAGQLDPA 492



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 195/415 (46%), Gaps = 26/415 (6%)

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L+  +Q  +    +G  +   +   LI  Y  C     +R +FD L  K+   WNS+I G
Sbjct: 39  LKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLING 98

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y++N  +N+A  +F  M    ++P+ +T++++ +  S   +L     +H   I+ GF+ D
Sbjct: 99  YAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSD 158

Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL-ASVLVYASCH--AEALELYRT 468
             + + +++ Y KC    ES++V  E+  +N+   N L A   V  +C+   E  E  + 
Sbjct: 159 TVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218

Query: 469 IWGSCREVNGSTFSIVLKAC-AAMTDLEQGKAIHCLALKAR----YDQDIFVESAVIDMY 523
           +       +  T S +L  C       + G+ +HC  +K       D D+ +   +IDMY
Sbjct: 219 MQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMY 278

Query: 524 CKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF-GVKPDEIT 581
            +   +   +R F ++ CR+  + W AM+ GY ++G   E  +LF  M    G++P+ ++
Sbjct: 279 SRSNKVVVGRRVFDRMKCRNVFS-WTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVS 337

Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHG------LIPQLEHYACIVDLLGRVGLLEGAK 635
            ++VL +C     +   R        +HG      L  ++     ++D+  + G L+ A+
Sbjct: 338 LVSVLPACSSFSGLLSGR-------QIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSAR 390

Query: 636 MTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLS 688
              +   +  DA  W S++S   ++G     +L   K+L+  ++PD  +T  +LS
Sbjct: 391 RVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILS 445



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 11/316 (3%)

Query: 391 KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
           KSLK   Q HS I+  G   +  + + LI  Y  C     S+ V   +  KN    N+L 
Sbjct: 37  KSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLI 96

Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYD 510
           +       + EA +L+  +  S    +  T S + K  + +  L  GK+IH  +++  + 
Sbjct: 97  NGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFV 156

Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG-C--YHEVSNLF 567
            D  V ++++ MYCKCG  E++++ F ++   +   WN ++ GYA  G C    E     
Sbjct: 157 SDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV 216

Query: 568 NKMSKFGVKPDEITYLAVLTSC----CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVD 623
            +M    V+PD  T  ++L  C          RE   Y+     + GL   +    C++D
Sbjct: 217 KQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLID 276

Query: 624 LLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLE-LQPDN 680
           +  R   +   +   D+M    +   W ++++     G+ D  L L    ++++ ++P+ 
Sbjct: 277 MYSRSNKVVVGRRVFDRMKC-RNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNR 335

Query: 681 ESTYVLLSNLYASAGM 696
            S   +L    + +G+
Sbjct: 336 VSLVSVLPACSSFSGL 351


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 255/461 (55%), Gaps = 31/461 (6%)

Query: 325 GQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
           G +  AR++FD +   ++  WN+MI GYS +    +AL ++ HML  S+  N YT   +L
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           +A S+  + ++  Q+H+HIIK GF  +    + L+  Y K   +  ++ +  ++D+++ V
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 445 HINALA-------------------------------SVLVYASCHAEALELYRTIWGSC 473
             N++                                S  V A    EAL L+  +  + 
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            +++       L+ACA +  L+QGK IH    K   + D  +   +IDMY KCG +E+A 
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
             FRK+    ++ W AM+ GYA HG   E    F KM   GV+P+++T+  +LT+C HAG
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSL 653
           LV EA+     M  +HG  P +EHY C+VDLLGR GLL+ A+  I+ MP+ P+A IW +L
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 654 LSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLC 713
           L+AC I+GN++LG   G  L+++ P +   Y+ L++++A+AG WN   ++R++MKE+ + 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 714 KEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           K PG S I V G  H F AGD SH Q KEI   L ++ E +
Sbjct: 486 KLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERL 526



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 175/422 (41%), Gaps = 36/422 (8%)

Query: 173 LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
           L  E N      +L    +++E  QIHG  +K G +                  G    A
Sbjct: 12  LSSESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYA 71

Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +FD I  P+   W+  I   + + +  EA  L+  + ++    N YT   LL +    
Sbjct: 72  RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131

Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
                 +QI A   K+GF   +   N+L+++Y K G +  AR +FD +  +D+VSWNSMI
Sbjct: 132 SASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIP-------------------------------NGY 378
            GY++ G    A ++F HM E ++I                                +  
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251

Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
            + S L+A ++   L Q   +H++I K    +D  +   LI  Y KC  L E+  V  ++
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311

Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
           ++K      A+ S         EALE +  +  +  E N  TF+ +L AC+    + + K
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371

Query: 499 AI-HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQ 556
            +   +     +   I     ++D+  + G +++A+     +  + + A W A++     
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431

Query: 557 HG 558
           HG
Sbjct: 432 HG 433



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/393 (22%), Positives = 179/393 (45%), Gaps = 46/393 (11%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAF-RFLFDTQNR-DIITYNALISGLAR 58
           QI+  ++K G  LD I ++ L++          A+ R +FD   R +   +N +I G + 
Sbjct: 36  QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSN 95

Query: 59  FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYL 115
             +   AL L+  + Y  +  +A+TF  L+KAC S+   +E + +H   +K+GF S +Y 
Sbjct: 96  SKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYT 155

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFV------- 168
            +  +  Y+KSG+I SA + F      D V++ +M+ GY   GE + + E+F        
Sbjct: 156 TNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI 215

Query: 169 ------------------------EMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGF 201
                                    M++ G++L+  +L + L A  D   + +G+ IH +
Sbjct: 216 ISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAY 275

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
             K      +   L   ++++Y +CG   +A+++F ++ E  V  W+  I+       G 
Sbjct: 276 IKKHEI--EIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGR 333

Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-GFMEVVSIGNAL 317
           EA   F  ++    + N+ T   +L++     ++   K +     ++ GF   +     +
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCM 393

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMI 349
           + + G+ G + +A  + + +  K + + W +++
Sbjct: 394 VDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 288/559 (51%), Gaps = 35/559 (6%)

Query: 231 DAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
           D++++F+ I  P  ++W   I      G+  ++ G F  +  +    +     ++L S  
Sbjct: 58  DSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK-------------CGQVND----- 329
               L  G+ +  +  +VG    +  GNAL++MY K              G+V D     
Sbjct: 118 LLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTER 177

Query: 330 --------------ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIP 375
                          R IF+ +  KD VSWN++IAG + NG + + L M   M   +L P
Sbjct: 178 TRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKP 237

Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL 435
           + +T++S+L  ++ +  + +  ++H   I+ G   D  + S LI  Y KC  + +S RV 
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297

Query: 436 SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLE 495
           + + +++ +  N++ +  V      E L  +R +  +  +    +FS ++ ACA +T L 
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357

Query: 496 QGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA 555
            GK +H    +  +D++IF+ S+++DMY KCG I  AK+ F ++    +  W AM+MG A
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417

Query: 556 QHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQL 615
            HG   +   LF +M   G+KP+ + ++AVLT+C H GLV EA  Y + M+   G+ P +
Sbjct: 418 LHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 477

Query: 616 EHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE 675
           EHYA + DLLGR G LE A   I  M I P   IW +LLSAC ++ NID+     +++LE
Sbjct: 478 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILE 537

Query: 676 LQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDS 735
           + P+N   Y+LL+N+Y++A  W +  K R  M+   + K P  SWI V    + F AGD 
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597

Query: 736 SHSQSKEIYKELIKLYEHM 754
           SH   ++I + +  L E M
Sbjct: 598 SHPCYEKIREAMEVLVELM 616



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 202/428 (47%), Gaps = 43/428 (10%)

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGF 201
           +A+ +++  Y  +G   +S   F+ M + GL  +     +VL +     D+  GE +HG+
Sbjct: 72  LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131

Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCG-------QKLDAVKMFDEITE------------- 241
            ++VG    +  +  NA+MN+Y +         Q+L A ++FDE+TE             
Sbjct: 132 IIRVGLDFDL--YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE 189

Query: 242 ------------PDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSV 286
                        D+VSW+  IA  A +G+  E   + +++   + + + +T+ ++L  +
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249

Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
                +  GK+I     + G    + + ++LI MY KC +V D+  +F  L  +D +SWN
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
           S+IAG  +NG F++ L  F  ML   + P  Y+ +SI+ A ++  +L    Q+H +I ++
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369

Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
           GF  +  + S L+  Y KC  +  +K++   +  ++ V   A+           +A+EL+
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429

Query: 467 RTIWGSCREVNGSTFSIVLKACA--AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
             +     + N   F  VL AC+   + D E  K  + +         +   +AV D+  
Sbjct: 430 EQMETEGIKPNHVAFMAVLTACSHGGLVD-EAWKYFNSMTRDFGIAPGVEHYAAVSDLLG 488

Query: 525 KCGTIEDA 532
           + G +E+A
Sbjct: 489 RAGRLEEA 496



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 46/381 (12%)

Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
           +Y     ++D+  +F+ + F  +++W S+I  Y+ +G  +Q+L  F  ML   L P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR------ 433
             S+L++ +    L     +H +II+ G   D    + L+  Y K   L ES R      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 434 -----------------VLSE---------IDKKNAVHINALASVLVYASCHAEALELYR 467
                            VLSE         + +K+ V  N + +       + E L + R
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
            + G+  + +  T S VL   A   D+ +GK IH  +++   D DI+V S++IDMY KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
            + D+ R F  +       WN+++ G  Q+G + E    F +M    +KP   ++ +++ 
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQ------LEHYACIVDLLGRVGLLEGAKMTIDQM 641
           +C H        T L     LHG I +      +   + +VD+  + G +  AK   D+M
Sbjct: 349 ACAHL-------TTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM 401

Query: 642 PIPPDAHIWQSLLSACTIYGN 662
            +  D   W +++  C ++G 
Sbjct: 402 RL-RDMVSWTAMIMGCALHGQ 421



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 151/316 (47%), Gaps = 18/316 (5%)

Query: 32  RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS---LV 88
           R+ F  +     +D++++N +I+G AR       L++   +    L+PD+FT SS   L+
Sbjct: 193 RKIFEMM---PEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249

Query: 89  KACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
                +   + +HG  ++ G  + +Y+ S  I+ YAK   +  +   F    + D +++ 
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309

Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKV 205
           +++ G V NG FD+    F +M    ++   +S ++++ A   +     G+Q+HG+  + 
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369

Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFG 262
           GF   +   + ++++++Y +CG    A ++FD +   D+VSW+  I   A      +A  
Sbjct: 370 GFDENI--FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIE 427

Query: 263 LFKDLRFNDFQINEYTMINLLSSVG-GERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
           LF+ +     + N    + +L++   G  +  A K   +     G    V    A+  + 
Sbjct: 428 LFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 487

Query: 322 GKCGQVNDARSIFDYL 337
           G+ G++ +A   +D++
Sbjct: 488 GRAGRLEEA---YDFI 500



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 104/194 (53%), Gaps = 9/194 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHF---TKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
           +I+   I+ G   D  ++++LI  +   T+ AD  R F  L +   RD I++N++I+G  
Sbjct: 260 EIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTE---RDGISWNSIIAGCV 316

Query: 58  RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
           +       L+ F ++    ++P +++FSS++ AC    +L   + +HG   + GF   ++
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  ++ YAK G I +A+  F      D V++TAM+ G   +G+   + E+F +M + G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436

Query: 175 LELNEFSLTAVLGA 188
           ++ N  +  AVL A
Sbjct: 437 IKPNHVAFMAVLTA 450



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 54/91 (59%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  + +NG   +  ++++L+  + K  + R A +     + RD++++ A+I G A   
Sbjct: 361 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHG 420

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           Q+  A++LF+++  +G++P+   F +++ AC
Sbjct: 421 QAPDAIELFEQMETEGIKPNHVAFMAVLTAC 451


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 207/678 (30%), Positives = 326/678 (48%), Gaps = 45/678 (6%)

Query: 88  VKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
           ++ CG  Q     + +H + +KLG S+ ++L++  I  YAK      A   F +    + 
Sbjct: 10  LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69

Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVL---GASFDVKEGEQIHG 200
           V++T MV  +  +G   ++  ++  M  S  ++ N+F  +AVL   G   DV+ G  +H 
Sbjct: 70  VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129

Query: 201 FGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK-------------------------- 234
              +          L NA++++YV+CG  +DA +                          
Sbjct: 130 HVSEARLEFDTV--LMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLM 187

Query: 235 -----MFDEITEPDVVSWSERIAAACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
                +FD++ EPD+VSW+  IA   D     A      +     +++ +T    L + G
Sbjct: 188 RDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACG 247

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY--LIFKDSVSW 345
               L  G+QI     K G        ++LI MY  C  +++A  IFD    + +    W
Sbjct: 248 LLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVW 307

Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           NSM++GY  NG + +AL M   M       + YT +  L+      +L+ A QVH  II 
Sbjct: 308 NSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIIT 367

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
            G+ LD  + S LI  Y K   +N + R+   +  K+ V  ++L               L
Sbjct: 368 RGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSL 427

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +     E++    SIVLK  +++  L+ GK IH   LK  Y+ +  + +A+ DMY K
Sbjct: 428 FMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAK 487

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG IEDA   F  +       W  +++G AQ+G   +  ++ +KM + G KP++IT L V
Sbjct: 488 CGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGV 547

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           LT+C HAGLV EA T    +   HGL P  EHY C+VD+  + G  + A+  I+ MP  P
Sbjct: 548 LTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKP 607

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
           D  IW SLL AC  Y N  L  +    LL   P++ S Y++LSN+YAS GMW+++ K+R+
Sbjct: 608 DKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNVYASLGMWDNLSKVRE 667

Query: 706 EMKEKFLCKEPGYSWIHV 723
            ++ K   K  G SWI +
Sbjct: 668 AVR-KVGIKGAGKSWIEI 684



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 19/436 (4%)

Query: 20  TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP-ALKLFDRLRYQGLR 78
           TLI    K    R AF         D++++N++I+GLA    + P AL+    +  +GL+
Sbjct: 176 TLILGHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLAD--NASPHALQFLSMMHGKGLK 233

Query: 79  PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
            DAFTF   +KACG L E  +   +H   +K G     Y +S  I+ Y+    +  A   
Sbjct: 234 LDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKI 293

Query: 136 FRDCLDLDN--VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS--FD 191
           F     L      + +M+ GYV NG++ ++  +   M   G + + ++ +  L     FD
Sbjct: 294 FDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFD 353

Query: 192 -VKEGEQIHGFGVKVGFLSGVCNHLNNAIM-NLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
            ++   Q+HG  +  G+     +H+  +I+ +LY + G    A+++F+ +   DVV+WS 
Sbjct: 354 NLRLASQVHGLIITRGY---ELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSS 410

Query: 250 RIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            I        G   F LF D+   D +I+ + +  +L        L++GKQI +FC K G
Sbjct: 411 LIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKG 470

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           +     I  AL  MY KCG++ DA ++FD L   D++SW  +I G ++NG  ++A+ +  
Sbjct: 471 YESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILH 530

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-IKSGFLLDDSMISCLITTYGKC 425
            M+E    PN  T+  +L A  ++  +++A  +   I  + G        +C++  + K 
Sbjct: 531 KMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKA 590

Query: 426 NALNESKRVLSEIDKK 441
               E++ +++++  K
Sbjct: 591 GRFKEARNLINDMPFK 606



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 230/542 (42%), Gaps = 49/542 (9%)

Query: 175 LELNEFSLTAVLGASFD-VKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLD 231
           ++LN+  L       F  +K  + +H   +K+G    + NH  L N+I+++Y +C +  D
Sbjct: 1   MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLG----LSNHIFLLNSIISVYAKCSRFDD 56

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKD-LRFNDFQINEYTMINLLSSVG 287
           A  +FDE+   ++VS++  ++A  +     EA  L+   L     Q N++    +L + G
Sbjct: 57  ARTLFDEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACG 116

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
               +  G  +     +        + NAL+ MY KCG + DA+ +F  +  K+S SWN+
Sbjct: 117 LVGDVELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNT 176

Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIP------------------------------NG 377
           +I G+++ G    A ++F  M E  L+                               + 
Sbjct: 177 LILGHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDA 236

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVL-- 435
           +T    L+A      L    Q+H  IIKSG       IS LI  Y  C  L+E+ ++   
Sbjct: 237 FTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDK 296

Query: 436 -SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
            S + +  AV  N++ S  V       AL +   +  S  + +  TFSI LK C    +L
Sbjct: 297 NSPLAESLAVW-NSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNL 355

Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
                +H L +   Y+ D  V S +ID+Y K G I  A R F ++    +  W+++++G 
Sbjct: 356 RLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGC 415

Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVL-TSCCHAGLVREARTYLSCMSDLHGLIP 613
           A+ G    V +LF  M    ++ D      VL  S   A L    + +  C+    G   
Sbjct: 416 ARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKK--GYES 473

Query: 614 QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL 673
           +      + D+  + G +E A    D +    D   W  ++  C   G  D  +    K+
Sbjct: 474 ERVITTALTDMYAKCGEIEDALALFDCL-YEIDTMSWTGIIVGCAQNGRADKAISILHKM 532

Query: 674 LE 675
           +E
Sbjct: 533 IE 534



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 15/273 (5%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++ L+I  G+ LD ++ + LI  + K  +   A R      N+D++ +++LI G AR  
Sbjct: 360 QVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLG 419

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVK---ACGSLQENEIVHGVCLKLGFSSRVYLVS 117
                  LF  + +  L  D F  S ++K   +  SLQ  + +H  CLK G+ S   + +
Sbjct: 420 LGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITT 479

Query: 118 GFIENYAKSGEIVSAEMCFRDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
              + YAK GEI  A   F DCL ++D +++T ++ G   NG  DK+  +  +M   G +
Sbjct: 480 ALTDMYAKCGEIEDALALF-DCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTK 538

Query: 177 LNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGV--CNHLNNAIMNLYVRCGQKLDAVK 234
            N+ ++  VL A       E+       +    G+  C    N +++++ + G+  +A  
Sbjct: 539 PNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARN 598

Query: 235 MFDEIT-EPDVVSWSERIAAACDGVEAFGLFKD 266
           + +++  +PD   W       C  ++A G +K+
Sbjct: 599 LINDMPFKPDKTIW-------CSLLDACGTYKN 624


>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 176/539 (32%), Positives = 284/539 (52%), Gaps = 13/539 (2%)

Query: 191 DVKEGEQIHGFGVKV---GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
           D++ G  +H + VK+   GF+      + N +++LY++ G    A ++FD +   DVVS+
Sbjct: 74  DLRTGMSVHTYLVKLNINGFIL-----IWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSF 128

Query: 248 SERIAAAC----DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           +  I+A+     D ++  GL+  ++  D + N  T   L+ +  G   LR      A   
Sbjct: 129 NTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTV 188

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           + G      +G++L+  Y K  ++ DA   F+ ++  D VSWN MI G + N     A+ 
Sbjct: 189 RCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVR 248

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
           MF  ML+ ++  +G+T+ SI++  S    LK  MQ H   IK G   +  + + LIT Y 
Sbjct: 249 MFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYS 308

Query: 424 KC-NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
           KC   +    ++   I + N +   A+ S  +    + EA+ L++ +       N  +FS
Sbjct: 309 KCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFS 368

Query: 483 IVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
            +L     + +LEQGK IH   +K+ +  D+ V +A+IDMY KCG++EDA   F K+ + 
Sbjct: 369 SILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKH 428

Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
            +     M+M Y QHG   E   +  +M   G+ PD +T+L  L +C H GLV E     
Sbjct: 429 DVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVF 488

Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
             M + H L P+ EH+AC+VD+LGR G L  A+  ID+M I  D  +W++LL AC ++G 
Sbjct: 489 KIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGE 548

Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWI 721
           + LG  +  K++ELQP     YVLL+N+YA  G W D   +R+++    L K+ G SW+
Sbjct: 549 MVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLVSHGLKKQVGCSWV 607



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 224/436 (51%), Gaps = 16/436 (3%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPAL-KLFDRLR 73
           ++   L+S + KF     A + LFDT   RD++++N +IS   R       L  L+ +++
Sbjct: 95  LIWNKLLSLYLKFGHIHHAHQ-LFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMK 153

Query: 74  YQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
            + ++P+  TF+ L+ AC    +L+   I H   ++ G SS  ++ S  ++ YAK  ++ 
Sbjct: 154 KEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLE 213

Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---G 187
            A   F + ++LD V++  M+ G   N   + +  +F +M    + ++ F+LT+++    
Sbjct: 214 DAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCS 273

Query: 188 ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL-DAVKMFDEITEPDVVS 246
              D+K G Q HG  +K+G        + NA++ +Y +C + +   VK+F  I+EP+++S
Sbjct: 274 KPGDLKHGMQFHGSAIKLGLAHET--PIYNALITMYSKCEKGVASPVKIFGSISEPNIIS 331

Query: 247 WSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W+  I+         EA GLFK++     + N+++  ++L   G    L  GKQI A   
Sbjct: 332 WTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARII 391

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K  F   +S+ NALI MY KCG + DA  +F  +   D VS  +MI  Y ++G   +AL+
Sbjct: 392 KSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALE 451

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITTY 422
           +   M    L+P+G T    L A S+   +++ ++V   +I+   L       +C++   
Sbjct: 452 ILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDML 511

Query: 423 GKCNALNESKRVLSEI 438
           G+   LNE++  + E+
Sbjct: 512 GRAGRLNEAENFIDEM 527



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 187/403 (46%), Gaps = 14/403 (3%)

Query: 247 WSER-IAAACDGVEAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
           W  R I++  + VE     K    +D  F+ ++++ I    +  G+  LR G  +  +  
Sbjct: 29  WCLRTISSLANPVEGIPFEKLETIDDHSFKFHQFSQILQECTDAGD--LRTGMSVHTYLV 86

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+     + I N L+S+Y K G ++ A  +FD +  +D VS+N+MI+    N +   ALD
Sbjct: 87  KLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNY--DALD 144

Query: 364 ---MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
              ++  M +  + PN  T A ++ A     +L+     H+H ++ G   ++ + S L+ 
Sbjct: 145 LVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVD 204

Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
            Y K   L ++ +  +EI + + V  N +       +    A+ ++  +      V+G T
Sbjct: 205 GYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFT 264

Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT-IEDAKRAFRKI 539
            + ++K C+   DL+ G   H  A+K     +  + +A+I MY KC   +    + F  I
Sbjct: 265 LTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSI 324

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGLVREA 598
              ++  W AM+ G+ Q+    E   LF +M + GV+ ++ ++ ++L    + A L +  
Sbjct: 325 SEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGK 384

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
           + +   +    GL   L     ++D+  + G LE A +   +M
Sbjct: 385 QIHARIIKSWFGL--DLSVNNALIDMYSKCGSLEDAHLVFMKM 425



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 42/91 (46%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ +IK+   LD  ++  LI  ++K      A          D+++   +I    +  
Sbjct: 385 QIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHG 444

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
           +   AL++   ++ +GL PD  TF   + AC
Sbjct: 445 KGKEALEILAEMKSEGLVPDGVTFLGCLYAC 475


>gi|293334125|ref|NP_001169301.1| uncharacterized protein LOC100383165 [Zea mays]
 gi|224028517|gb|ACN33334.1| unknown [Zea mays]
          Length = 660

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 202/665 (30%), Positives = 325/665 (48%), Gaps = 26/665 (3%)

Query: 76  GLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
           G  P+ F  +S + AC      ++     +HG+ ++       Y+ S  +  YAK G + 
Sbjct: 5   GFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGNPYVGSSLMLVYAKHGRVA 64

Query: 131 SAEMCFRDCLD--LDNVAYTAMVCGYVWNGE-FDKSKEVFVEMRSLGLELNEFSLTAVLG 187
           +AE  F        D   + AM+ GYV NG  +D ++ V + M   G+  + F+  +   
Sbjct: 65  AAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVAL-MHGSGIAPDMFTYISAAK 123

Query: 188 ASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
           AS+   D+  G Q+HG  V+   L      + NA+M++Y + GQK  A  +F +I   D 
Sbjct: 124 ASWIARDLYFGRQVHGLVVR-SVLESNNTSVMNALMDMYFKAGQKETAADIFGKIRWKDT 182

Query: 245 VSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
           VSW+  I+   D   A   F D+     + N+ T   +L   G       G QI    Y+
Sbjct: 183 VSWNTMISGLEDERAAADCFVDMARCGCRSNQVTFSVMLRLSGAS----LGLQIFGLAYR 238

Query: 305 VGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDM 364
            G+ + V + NA I+M  +CG ++ A   F  L  ++ V+WN MIAGY  +G    A+ +
Sbjct: 239 HGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNVVTWNEMIAGYGLHGCSGDAMRL 298

Query: 365 FCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK 424
           F  ++ F   P+ +T  ++L A       +   QVH+ ++K GF     + + LI     
Sbjct: 299 FRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHASVLKQGFASCQFVSTSLIKAKA- 357

Query: 425 CNALNESK----RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS- 479
             AL  S     +++ +  + + V      S  V      EAL L+ +    C E     
Sbjct: 358 --ALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDCPEKPDEF 415

Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
               +L ACA    + Q + IH L ++  + + + V SA++D Y KCG I  AK AF  +
Sbjct: 416 ILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSALVDAYAKCGDITAAKGAFATV 475

Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK-PDEITYLAVLTSCCHAGLVREA 598
                  +N M+  YA HG   EV +L+ +M++  +  P   T++A +++C H GLV + 
Sbjct: 476 STKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATFVAAISACSHLGLVEQG 535

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
           +   S M   HG+ P   +YAC++DLL R GLLE A   I  MP  P   +W+SL++ C 
Sbjct: 536 KLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAMPFQPWPAVWRSLMNGCR 595

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I+GN +LGLLA  ++L + P+++  YV LS++YA  G W      R++M E  + K  GY
Sbjct: 596 IHGNKELGLLASEQILRMAPNSDGAYVSLSHVYAEDGDWRSAEDARRKMAENQVHKAQGY 655

Query: 719 SWIHV 723
           S + +
Sbjct: 656 SSLQI 660



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 258/583 (44%), Gaps = 44/583 (7%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARF 59
           ++ L ++   H +P + ++L+  + K      A R      + +RD+  +NA++ G    
Sbjct: 34  LHGLAVRAVLHGNPYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVAN 93

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGF-SSRVYL 115
                A +    +   G+ PD FT+ S  KA    ++      VHG+ ++    S+   +
Sbjct: 94  GHGYDATRTVALMHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSV 153

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
           ++  ++ Y K+G+  +A   F      D V++  M+ G     +   + + FV+M   G 
Sbjct: 154 MNALMDMYFKAGQKETAADIFGKIRWKDTVSWNTMISGLE---DERAAADCFVDMARCGC 210

Query: 176 ELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             N+ + + +L   GAS     G QI G   + G+   V   + NA +N+  RCG    A
Sbjct: 211 RSNQVTFSVMLRLSGASL----GLQIFGLAYRHGYSDNVL--VANAAINMLSRCGLLSCA 264

Query: 233 VKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
              F ++   +VV+W+E IA      C G +A  LF+ L     + +E+T   +LS+   
Sbjct: 265 YGYFCDLGVRNVVTWNEMIAGYGLHGCSG-DAMRLFRSLVCFGARPDEFTYPAVLSAFQQ 323

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALI--------SMYGKCGQVNDARSIFDYLIFK 340
           +   R  +Q+ A   K GF     +  +LI        S+ G    + DA  +       
Sbjct: 324 DHDARNHEQVHASVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEM------- 376

Query: 341 DSVSWNSMIAGYSENGFFNQALDMF--CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ 398
           D VSW   I+ + ++G   +AL +F  C  ++    P+ + + +IL A +N+  ++Q   
Sbjct: 377 DLVSWGVAISAFVKHGLGQEALSLFNSCR-VDCPEKPDEFILGTILNACANAALIRQCRC 435

Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
           +HS ++++G      + S L+  Y KC  +  +K   + +  K+A+  N + +       
Sbjct: 436 IHSLVVRTGHSKHLCVSSALVDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGL 495

Query: 459 HAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
             E L LY+ +          +TF   + AC+ +  +EQGK +    L A          
Sbjct: 496 IREVLSLYQEMTQLQLAAPTPATFVAAISACSHLGLVEQGKLLFSSMLSAHGMNPTRANY 555

Query: 518 A-VIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHG 558
           A +ID+  + G +E+A    + +  +   A W ++M G   HG
Sbjct: 556 ACLIDLLARRGLLEEATGVIQAMPFQPWPAVWRSLMNGCRIHG 598



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 177/390 (45%), Gaps = 18/390 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L  ++G+  + +++   I+  ++      A+ +  D   R+++T+N +I+G     
Sbjct: 231 QIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNVVTWNEMIAGYGLHG 290

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
            SG A++LF  L   G RPD FT+ +++ A       + +E VH   LK GF+S  ++ +
Sbjct: 291 CSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHASVLKQGFASCQFVST 350

Query: 118 GFIENYAKSGEIVSAEM-CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
             I+  A  G  V   +   +D  ++D V++   +  +V +G   ++  +F   R    E
Sbjct: 351 SLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDCPE 410

Query: 177 -LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             +EF L  +L A  +   +++   IH   V+ G    +C  +++A+++ Y +CG    A
Sbjct: 411 KPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLC--VSSALVDAYAKCGDITAA 468

Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL-RFNDFQINEYTMINLLSSVGG 288
              F  ++  D + ++  + A A  G+  E   L++++ +         T +  +S+   
Sbjct: 469 KGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATFVAAISACSH 528

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSIFDYLIFKD-SVSWN 346
             ++  GK + +       M       A LI +  + G + +A  +   + F+     W 
Sbjct: 529 LGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAMPFQPWPAVWR 588

Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
           S++ G   +G  N+ L +        + PN
Sbjct: 589 SLMNGCRIHG--NKELGLLASEQILRMAPN 616


>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
 gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 783

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 187/633 (29%), Positives = 323/633 (51%), Gaps = 45/633 (7%)

Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
           Y+ S  +  AE  FR     + +++ A++ GY  +G   ++  +F EM+S G++ NE++L
Sbjct: 69  YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128

Query: 183 TAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEI 239
            +VL     +     GEQIHG  +K GF   V  ++ N ++ +Y +C +  +A  +F+ +
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDV--NVVNGLLAMYAQCKRISEAEYLFETM 186

Query: 240 T-EPDVVSWSERIAAACDGVEAFGL---FKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
             E + V+W+  +        AF     F+DLR    Q N+YT  ++L++       R G
Sbjct: 187 EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
            Q+     K GF   + + +ALI MY KC ++  AR++ + +   D VSWNSMI G    
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQ 306

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS-LKQAMQVHSHIIKSGFLLDDSM 414
           G   +AL MF  M E  +  + +T+ SIL   + S++ +K A   H  I+K+G+     +
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366

Query: 415 ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR 474
            + L+  Y K   ++ + +V   + +K+ +   AL +   +   + EAL+L+  +     
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426

Query: 475 EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
             +    + VL A A +T LE G+ +H   +K+ +   + V ++++ MY KCG++EDA  
Sbjct: 427 TPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANV 486

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
            F  +    L  W  +++GYA++G                                   L
Sbjct: 487 IFNSMEIRDLITWTCLIVGYAKNG-----------------------------------L 511

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           + +A+ Y   M  ++G+ P  EHYAC++DL GR G     +  + QM + PDA +W+++L
Sbjct: 512 LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAIL 571

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
           +A   +GNI+ G  A   L+EL+P+N   YV LSN+Y++AG  ++   +R+ MK + + K
Sbjct: 572 AASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISK 631

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
           EPG SW+   G  H F + D  H +  EIY ++
Sbjct: 632 EPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKV 664



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 270/535 (50%), Gaps = 32/535 (5%)

Query: 23  SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGP---ALKLFDRLRYQGLRP 79
           S+  + +D  + FR       ++ I++NALISG   +C+SG    A  LF  ++  G++P
Sbjct: 70  SNSRRLSDAEKLFR---SNPVKNTISWNALISG---YCKSGSKVEAFNLFWEMQSDGIKP 123

Query: 80  DAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
           + +T  S+++ C SL      E +HG  +K GF   V +V+G +  YA+   I  AE  F
Sbjct: 124 NEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLF 183

Query: 137 RDCL-DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV--- 192
                + +NV +T+M+ GY  NG   K+ E F ++R  G + N+++  +VL A   V   
Sbjct: 184 ETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243

Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA 252
           + G Q+H   VK GF + +  ++ +A++++Y +C +   A  + + +   DVVSW+  I 
Sbjct: 244 RVGVQVHCCIVKSGFKTNI--YVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301

Query: 253 AAC-DGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI-LRAGKQIQAFCYKVGFM 308
                G+  EA  +F  +   D +I+++T+ ++L+     R  ++          K G+ 
Sbjct: 302 GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA 361

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
               + NAL+ MY K G ++ A  +F+ +I KD +SW +++ G + NG +++AL +FC+M
Sbjct: 362 TYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM 421

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
               + P+    AS+L A +    L+   QVH + IKSGF    S+ + L+T Y KC +L
Sbjct: 422 RVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSL 481

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
            ++  + + ++ ++ +      + L+        LE  +  + S R V G T      AC
Sbjct: 482 EDANVIFNSMEIRDLI----TWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYAC 537

Query: 489 AAMTDL--EQGKAIHCLAL--KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
             M DL    G  +    L  +   + D  V  A++    K G IE+ +RA + +
Sbjct: 538 --MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 199/383 (51%), Gaps = 16/383 (4%)

Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
           N +I  Y    +++DA  +F     K+++SWN++I+GY ++G   +A ++F  M    + 
Sbjct: 63  NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122

Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
           PN YT+ S+L   ++   L +  Q+H H IK+GF LD ++++ L+  Y +C  ++E++ +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182

Query: 435 LSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD 493
              ++ +KN V   ++ +         +A+E +R +     + N  TF  VL ACA+++ 
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242

Query: 494 LEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
              G  +HC  +K+ +  +I+V+SA+IDMY KC  +E A+     +  D +  WN+M++G
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVG 302

Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
             + G   E  ++F +M +  +K D+ T  ++L   C A     +RT +   S  H LI 
Sbjct: 303 CVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN--CFA----LSRTEMKIASSAHCLIV 356

Query: 614 QLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNID--L 665
           +  +         +VD+  + G+++ A    + M I  D   W +L++  T  G+ D  L
Sbjct: 357 KTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEAL 415

Query: 666 GLLAGSKLLELQPDNESTYVLLS 688
            L    ++  + PD   T  +LS
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLS 438



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 140/256 (54%), Gaps = 11/256 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++  ++K+G   +  + + LI  + K  +   A   L   +  D++++N++I G  R  
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
             G AL +F R+  + ++ D FT  S++  C +L   E+      H + +K G+++   +
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLV 366

Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
            +  ++ YAK G + SA   F   ++ D +++TA+V G   NG +D++ ++F  MR  G+
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426

Query: 176 ELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
             ++    +VL AS +   ++ G+Q+HG  +K GF S +   +NN+++ +Y +CG   DA
Sbjct: 427 TPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS--VNNSLVTMYTKCGSLEDA 484

Query: 233 VKMFDEITEPDVVSWS 248
             +F+ +   D+++W+
Sbjct: 485 NVIFNSMEIRDLITWT 500



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 7/286 (2%)

Query: 383 ILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN 442
           +L  +S S  + +A Q+   + +     D+   + +I  Y     L++++++      KN
Sbjct: 34  LLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKN 89

Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
            +  NAL S    +    EA  L+  +     + N  T   VL+ C ++  L +G+ IH 
Sbjct: 90  TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149

Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYH 561
             +K  +D D+ V + ++ MY +C  I +A+  F  +    +   W +M+ GY+Q+G   
Sbjct: 150 HTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAF 209

Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
           +    F  + + G + ++ T+ +VLT+C      R       C+    G    +   + +
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK-SGFKTNIYVQSAL 268

Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
           +D+  +   +E A+  ++ M +  D   W S++  C   G I   L
Sbjct: 269 IDMYAKCREMESARALLEGMEV-DDVVSWNSMIVGCVRQGLIGEAL 313


>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 287/517 (55%), Gaps = 4/517 (0%)

Query: 243 DVVSWSERIAAAC---DGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQI 298
           D +SW+ RI+      D    F +FK L  +  +Q ++ T+  +L++          K I
Sbjct: 5   DTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMI 64

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
            +  +  G+   +++GNALI+ Y +CG  +  R +FD +  K+ V+W ++I+G S+  F+
Sbjct: 65  HSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFY 124

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCL 418
            ++L +F  M +  + PN  T  S L A S  +++++  Q+H  + K G   D  + S L
Sbjct: 125 EESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESAL 184

Query: 419 ITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
           +  Y KC +L ++ ++    ++ + V +  +   L       E+++++  +  +   ++ 
Sbjct: 185 MDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDP 244

Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
           +  S +L      T L  GK IH L +K  +  + FV + +I+MY KCG ++D+ + F  
Sbjct: 245 NMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCW 304

Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
           + + +   WN+M+  +A+HG       L+ +M   GV P ++T+L++L +C H GLV + 
Sbjct: 305 MPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKG 364

Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
             +L  M+  +G+ P++EHYAC+VD++GR GLL  AK  I+++P  P   +WQ+LL AC+
Sbjct: 365 MGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACS 424

Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGY 718
           I+GN ++G  A ++L    P++ + Y+LL+N+Y+S G W +  +  K+MK+  + KE G 
Sbjct: 425 IHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGI 484

Query: 719 SWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
           SWI +    H F   D  H  ++ IY  L +L++ M+
Sbjct: 485 SWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFKLMM 521



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 206/412 (50%), Gaps = 13/412 (3%)

Query: 44  RDIITYNALISGLARFCQSGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQ---ENEI 99
           +D I++N+ ISGL          ++F +L   G+ + D  T ++++ AC   +    +++
Sbjct: 4   KDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKM 63

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H +    G+   + + +  I +Y + G   S    F +  + + V +TA++ G      
Sbjct: 64  IHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQF 123

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLN 216
           +++S ++F +MR   ++ N  +  + L A      ++EG QIHG   K+G    +C  + 
Sbjct: 124 YEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLC--IE 181

Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE-RIAAACDGV--EAFGLFKDLRFNDFQ 273
           +A+M++Y +CG   DA K+F+   E D VS +   +  A +G   E+  +F  +  N   
Sbjct: 182 SALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVV 241

Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
           I+   +  +L   G +  L  GKQI +   K  F     + N LI+MY KCG ++D+  I
Sbjct: 242 IDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKI 301

Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
           F ++  ++SVSWNSMIA ++ +G  ++AL ++  M    + P   T  S+L A ++   +
Sbjct: 302 FCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLV 361

Query: 394 KQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
           ++ M     + K  G        +C++   G+   LNE+K+ +  + +K  +
Sbjct: 362 EKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGI 413



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 42/391 (10%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+SL+   G+  +  +   LI+ + +        R   +   ++++T+ A+ISGL++   
Sbjct: 64  IHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQF 123

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSG 118
              +LKLF ++R   + P++ T+ S + AC  LQ   E   +HG+  KLG    + + S 
Sbjct: 124 YEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESA 183

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ Y+K G +  A   F    ++D V+ T ++ G   NG  ++S +VFV+M   G+ ++
Sbjct: 184 LMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVID 243

Query: 179 EFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
              ++A+LG       +  G+QIH   +K  F  G    +NN ++N+Y +CG   D++K+
Sbjct: 244 PNMISAILGVFGIDTSLALGKQIHSLIIKKSF--GSNYFVNNGLINMYSKCGDLDDSIKI 301

Query: 236 FDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
           F  + + + VSW+  IAA     +G  A  L++++R       + T ++LL +     ++
Sbjct: 302 FCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLV 361

Query: 293 RAGKQIQAFCYKVGFMEVVS----IGNAL------ISMYGKCGQVNDARSIFDYLIFKD- 341
             G         +GF+E ++    IG  +      + M G+ G +N+A+   + L  K  
Sbjct: 362 EKG---------MGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPG 412

Query: 342 -----------SVSWNSMIAGYSENGFFNQA 361
                      S+  NS +  Y+ N  F QA
Sbjct: 413 ILVWQALLGACSIHGNSEMGKYAANQLFLQA 443



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 122/259 (47%), Gaps = 6/259 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI+ L+ K G H D  + + L+  ++K      A++     +  D ++   ++ GLA+  
Sbjct: 164 QIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNG 223

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
               ++++F ++   G+  D    S+++   G   SL   + +H + +K  F S  ++ +
Sbjct: 224 FEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNN 283

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
           G I  Y+K G++  +   F      ++V++ +M+  +  +G   ++ +++ EMR  G+  
Sbjct: 284 GLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWP 343

Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKM 235
            + +  ++L A   V   E+  GF   +    G+   + +   ++++  R G   +A K 
Sbjct: 344 TDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKF 403

Query: 236 FDEITE-PDVVSWSERIAA 253
            + + E P ++ W   + A
Sbjct: 404 IERLPEKPGILVWQALLGA 422


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 194/630 (30%), Positives = 317/630 (50%), Gaps = 30/630 (4%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELN 178
           I  + ++G +  AE  F          Y  M+ GY  NG   ++   F  + R      N
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYN 173

Query: 179 EFSLTAVLGASFDVKEGEQIHG-FGVK--VGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
             +L   LG S  + +   +     VK  V +   + +H N+ +++L         A   
Sbjct: 174 --TLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSL---------ARHY 222

Query: 236 FDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           FD   E D VSW+  +AA        G  ++ R       E+  I+  + + G       
Sbjct: 223 FDLAPEKDAVSWNGMLAAYVRN----GRIQEARELFDSRTEWDAISWNALMAGYVQRSQI 278

Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
           ++ Q    K+   +VVS  N ++S Y + G + +AR +FD    +D  +W ++++GY++N
Sbjct: 279 EEAQKMFNKMPQRDVVSW-NTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQN 337

Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
           G   +A  +F  M + + +     MA+ ++        ++ M+    +  +    + +  
Sbjct: 338 GMLEEAKRVFDAMPDKNAVSWNAMMAAYVQ--------RRMMEEAKELFDAMPCRNVASW 389

Query: 416 SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCRE 475
           + ++T Y +   L+E++ +   + +K+AV   A+ +         E L+L++ + G C E
Sbjct: 390 NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM-GRCGE 448

Query: 476 -VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKR 534
            VN S F+ VL  CA +  LE G  +H   +KA Y    FV +A++ MY KCG++E+A  
Sbjct: 449 WVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHS 508

Query: 535 AFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGL 594
           AF ++    +  WN M+ GYA+HG   E   +F+ M K   KPD+IT + VL +C H+GL
Sbjct: 509 AFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGL 568

Query: 595 VREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
           V +  +Y   M    G+  + EHY C++DLLGR G L+ A   +  MP  PD+ +W +LL
Sbjct: 569 VEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 628

Query: 655 SACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCK 714
            A  I+ N +LG  A  K+ EL+P+N   YVLLSN+YAS+G W DV K+R  M E+ + K
Sbjct: 629 GASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKK 688

Query: 715 EPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
            PG+SWI V    H F  GDS H + ++IY
Sbjct: 689 VPGFSWIEVQNKVHTFSVGDSVHPEREDIY 718



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 189/409 (46%), Gaps = 50/409 (12%)

Query: 36  RFLFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL 94
           R LFD++   D I++NAL++G  +  Q   A K+F+++  +    D  +++++V   G  
Sbjct: 251 RELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR----DVVSWNTMV--SGYA 304

Query: 95  QENEIVHGVCL-KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
           +  ++     L  +     V+  +  +  YA++G +  A+  F    D + V++ AM+  
Sbjct: 305 RRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAA 364

Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
           YV     +++KE+F  M    +            AS+                       
Sbjct: 365 YVQRRMMEEAKELFDAMPCRNV------------ASW----------------------- 389

Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFN 270
              N ++  Y + G   +A  +F  + + D VSW+  +AA        E   LFK++   
Sbjct: 390 ---NTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRC 446

Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA 330
              +N      +LS+      L  G Q+ +   K G+     +GNAL++MY KCG + +A
Sbjct: 447 GEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEA 506

Query: 331 RSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
            S F+ +  +D VSWN+MIAGY+ +GF  +AL++F  M + S  P+  T+  +L A S+S
Sbjct: 507 HSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHS 566

Query: 391 KSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
             +++ +     + +  G        +C+I   G+   L+E+  ++ ++
Sbjct: 567 GLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM 615



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 156/354 (44%), Gaps = 53/354 (14%)

Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
           MEV+   N  I+ + + G+V DA  +F  +  + + ++N+M+AGY+ NG   QAL  F  
Sbjct: 105 MEVIR-RNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC---------- 417
           +      P+ ++  ++L A+  S SL     +   +     +  + MIS           
Sbjct: 164 IPR----PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLA 219

Query: 418 -----------------LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
                            ++  Y +   + E++ +     + +A+  NAL +  V  S   
Sbjct: 220 RHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIE 279

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
           EA +++  +    R+V   +++ ++   A   D+ + + +  +A      +D+F  +A++
Sbjct: 280 EAQKMFNKM--PQRDV--VSWNTMVSGYARRGDMAEARRLFDVAPI----RDVFTWTAIV 331

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
             Y + G +E+AKR F  +   +   WNAMM  Y Q     E   LF+ M    V     
Sbjct: 332 SGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNV----A 387

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE--HYACIVDLLGRVGLLE 632
           ++  +LT    AG++ EAR        + G++PQ +   +A ++    ++G  E
Sbjct: 388 SWNTMLTGYAQAGMLDEARA-------IFGMMPQKDAVSWAAMLAAYSQIGFSE 434



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 18/224 (8%)

Query: 43  NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--- 99
            +D +++ A+++  ++   S   L+LF  +   G   +   F+ ++  C  +   E    
Sbjct: 414 QKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQ 473

Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
           +H   +K G+    ++ +  +  Y K G +  A   F +  + D V++  M+ GY  +G 
Sbjct: 474 LHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGF 533

Query: 160 FDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEG-----EQIHGFGVKVGFLSGV 211
             ++ EVF  MR    + ++ +L  VL A   S  V++G          FGV        
Sbjct: 534 GKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYT 593

Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSERIAAA 254
           C      +++L  R G+  +AV +  ++  EPD   W   + A+
Sbjct: 594 C------MIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGAS 631



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 48/91 (52%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           Q++S LIK G+ +   +   L++ + K      A     + + RD++++N +I+G AR  
Sbjct: 473 QLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHG 532

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
               AL++FD +R    +PD  T   ++ AC
Sbjct: 533 FGKEALEVFDTMRKTSTKPDDITLVGVLAAC 563



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 20/184 (10%)

Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
           L+A A      +  A     +  + D ++   +  I  + + G + DA+R F  + R S 
Sbjct: 79  LRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRST 138

Query: 545 AGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSC 604
           + +N M+ GYA +G   +  + F  +     +PD  +Y  +L    HA  V       S 
Sbjct: 139 STYNTMLAGYAANGRLPQALSFFRSIP----RPDSFSYNTLL----HALGVS------SS 184

Query: 605 MSDLHGLIPQLE-----HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTI 659
           ++D+  L  ++       Y  ++      GL+  A+   D  P   DA  W  +L+A   
Sbjct: 185 LADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAP-EKDAVSWNGMLAAYVR 243

Query: 660 YGNI 663
            G I
Sbjct: 244 NGRI 247


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 156/470 (33%), Positives = 263/470 (55%), Gaps = 1/470 (0%)

Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
           +LL S    + ++ GKQ+ A     GF     I   L+++Y  C  ++ AR +FD +   
Sbjct: 80  SLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKH 139

Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVH 400
           +   WN +I GY+ NG +  A+ ++  M ++ L+P+ +T   +L+A +   +++   ++H
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 401 SHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
            H++++G+  D  + + LI  Y KC  +  ++ V  +I  ++AV  N++ +         
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPD 259

Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
             L L   +  +      +T    + A A    L QG+ +H L+ +  ++    V++A++
Sbjct: 260 ACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALV 319

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY KCG++  A+  F ++    +  WNAM+ GYA HG   E  +LF +M++   KPD I
Sbjct: 320 DMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHI 378

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T++ VL++C H GL+ E   +   M   + + P ++HY C+VDLLG  G L+ A   I Q
Sbjct: 379 TFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQ 438

Query: 641 MPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDV 700
           M + PD+ +W +LL++C I+ N++LG +A  +L+EL+PD+   YV+LSN+YA AG W  V
Sbjct: 439 MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGV 498

Query: 701 GKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
            KLRK M ++ L K    SWI V    H F +GD+SH  S EIY EL ++
Sbjct: 499 AKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERV 548



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 150/302 (49%), Gaps = 14/302 (4%)

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
           H     L P     AS+L++    K++K   Q+H+ +  +GF  D  + + L+  Y  C+
Sbjct: 65  HAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCD 124

Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
           +L+ ++ +   I K N    N L     +   +  A++LY  ++      +  TF  VLK
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184

Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           ACAA++ +E G+ IH   ++  +++D+FV +A+IDMY KCG +  A+  F KI       
Sbjct: 185 ACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL 244

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN+M+  Y+Q+G      +L ++M   G++P E T +  +++      + + R       
Sbjct: 245 WNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGR------- 297

Query: 607 DLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIY 660
           +LHGL  + E  +       +VD+  + G +  A+   +++ +      W ++++   ++
Sbjct: 298 ELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYAMH 356

Query: 661 GN 662
           G+
Sbjct: 357 GH 358



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 6/309 (1%)

Query: 192 VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
           +K G+Q+H      GF  G    +   ++NLY  C     A  +FD I + ++  W+  I
Sbjct: 91  IKPGKQLHAQVCLAGF--GFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLI 148

Query: 252 AA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
              A +G    A  L+  +       + +T   +L +      +  G++I     + G+ 
Sbjct: 149 RGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWE 208

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
           + V +G ALI MY KCG V  AR +FD ++ +D+V WNSM+A YS+NG  +  L +   M
Sbjct: 209 KDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEM 268

Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
           +   L P   T+ + + A +++ +L Q  ++H    +  F   D + + L+  Y KC ++
Sbjct: 269 VLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSV 328

Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
             ++ +   +  K  V  NA+ +         EAL+L+  +     + +  TF  VL AC
Sbjct: 329 RVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSAC 387

Query: 489 AAMTDLEQG 497
           +    LE+G
Sbjct: 388 SHGGLLEEG 396



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 166/361 (45%), Gaps = 16/361 (4%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
           Q+++ +   G   D +++T L++ +    D   + R LFD     +I  +N LI G A  
Sbjct: 96  QLHAQVCLAGFGFDTVIATKLVNLYC-VCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWN 154

Query: 60  CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
                A++L+ ++   GL PD FTF  ++KAC +L   +    +H   ++ G+   V++ 
Sbjct: 155 GPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVG 214

Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
           +  I+ YAK G + SA   F   L  D V + +M+  Y  NG  D    +  EM   GL 
Sbjct: 215 AALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLR 274

Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
             E +L   + AS D   + +G ++HG   +  F S   + +  A++++Y +CG    A 
Sbjct: 275 PTEATLVTAISASADNAALPQGRELHGLSWRQEFESH--DKVKTALVDMYAKCGSVRVAR 332

Query: 234 KMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
            +F+ +    VVSW+  I   A      EA  LF+++     + +  T + +LS+     
Sbjct: 333 NLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN-RVAKPDHITFVGVLSACSHGG 391

Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS-IFDYLIFKDSVSWNSM 348
           +L  G    +           V     ++ + G  G++++A + I    +  DS  W ++
Sbjct: 392 LLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGAL 451

Query: 349 I 349
           +
Sbjct: 452 L 452


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 212/739 (28%), Positives = 362/739 (48%), Gaps = 25/739 (3%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           I+ + IK+G  +D  L   L+  + K  D   +     + + +D +++N+++ G      
Sbjct: 214 IHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRH 273

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSG 118
              AL  F R+ +     D  +    + A  SL E    + VHG+ +KLG+ S V + + 
Sbjct: 274 PEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANS 333

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL-EL 177
            I  Y++  +I +AE  FR+    D V++ AM+ G+  NG+  +  ++ V+M+ +G  + 
Sbjct: 334 LISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQP 393

Query: 178 NEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLDA 232
           +  +L  +L    ++   +EG  IHG+ ++   +S   +H  L N+++ +Y +C     A
Sbjct: 394 DIVTLITLLPLCAELMLSREGRTIHGYAIRRQMIS---DHVMLLNSLIGMYSKCNLVEKA 450

Query: 233 VKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
             +F+   E D VSW+  I+         EA  LF ++       +  T+  +LSS    
Sbjct: 451 ELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSL 510

Query: 290 RI--LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDSVSWN 346
            I  +  GK +  +  K GF+  + + N L+ MY  CG +  + SI  +     D  SWN
Sbjct: 511 NINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWN 570

Query: 347 SMIAGYSENGFFNQALDMFCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           ++I G      F +AL+ F  M  E  L  +  T+ S L A +N +       +H   +K
Sbjct: 571 TLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVK 630

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           S    D  + + LIT Y +C  +N +K V       N    N + S L +     EALEL
Sbjct: 631 SPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALEL 690

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCK 525
           +  +     E N  T   VL AC  +  L  GK +H    +     + F+ +A+ID+Y  
Sbjct: 691 FLNLQ---FEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSN 747

Query: 526 CGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
           CG ++ A + FR     S + WN+M+  Y  HG   +   LF++M + G +  + T++++
Sbjct: 748 CGRLDTALQVFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSL 807

Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
           L++C H+GLV +   +  CM + +G+ P+ EH   +VD+LGR G L+ A    +      
Sbjct: 808 LSACSHSGLVNQGLWFYECMLERYGVQPETEHQVYVVDMLGRSGRLDEA---YEFAKGCD 864

Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
            + +W +LLSAC  +G + LG      L +L+P N   Y+ LSN+Y +AG W D  +LR+
Sbjct: 865 SSGVWGALLSACNYHGELKLGKKIAQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELRQ 924

Query: 706 EMKEKFLCKEPGYSWIHVG 724
            +++  L K  GYS + VG
Sbjct: 925 SIQDLGLRKTAGYSLVDVG 943



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 185/666 (27%), Positives = 317/666 (47%), Gaps = 36/666 (5%)

Query: 18  STTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISG-LARFCQSGPALKLFDRLRYQG 76
           ST+L++ ++K  DF  +     + QNRD I +NA+++  L   C    A+  FD++    
Sbjct: 129 STSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYR-IAMDFFDKMIKAQ 187

Query: 77  LRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAE 133
              D+ T   +V A     +  +   +H V +K G    + L +  ++ YAK G++ S+E
Sbjct: 188 TGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSE 247

Query: 134 MCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK 193
             + +    D V++ +++ G ++N   +K+   F  M       +  SL   + AS  + 
Sbjct: 248 CLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLG 307

Query: 194 E---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS-- 248
           E   G+ +HG G+K+G+ S V   + N++++LY +C     A  +F EI   D+VSW+  
Sbjct: 308 ELSFGQSVHGLGIKLGYKSHV--SVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAM 365

Query: 249 -ERIAAACDGVEAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
            E  A+     E F L   + +   FQ +  T+I LL       + R G+ I  +  +  
Sbjct: 366 MEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQ 425

Query: 307 FM-EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
            + + V + N+LI MY KC  V  A  +F+    KD+VSWN+MI+GYS N +  +A ++F
Sbjct: 426 MISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLF 485

Query: 366 CHMLEFSLIPNGYTMASILEAVS--NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
             ML +    +  T+ +IL + +  N  S+     VH   +KSGFL    +I+ L+  Y 
Sbjct: 486 TEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYI 545

Query: 424 KCNALNESKRVLSEIDK-KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
            C  L  S  +L E     +    N L    V      EALE +  +      +N  + +
Sbjct: 546 NCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQE-PPLNYDSIT 604

Query: 483 IV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
           +V  L ACA +     GK++H L +K+    D  V++++I MY +C  I  AK  F+   
Sbjct: 605 LVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFS 664

Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR---- 596
             +L  WN M+   + +    E   LF  +     +P+EIT + VL++C   G++R    
Sbjct: 665 TPNLCSWNCMISALSHNRESREALELFLNLQ---FEPNEITIIGVLSACTQIGVLRHGKQ 721

Query: 597 -EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
             A  + +C+ D +  I      A ++DL    G L+ A + + +         W S++S
Sbjct: 722 VHAHVFRTCIQD-NSFIS-----AALIDLYSNCGRLDTA-LQVFRHAKEKSESAWNSMIS 774

Query: 656 ACTIYG 661
           A   +G
Sbjct: 775 AYGYHG 780



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 278/585 (47%), Gaps = 43/585 (7%)

Query: 51  ALISGLARFCQSGPALKLFDRL--RYQGLRPDAFTFSSLVKACGSLQENEIV-----HGV 103
           A++S    FC     ++LFD +  RY   R   F     +K C  L++ +IV     H  
Sbjct: 62  AMLSHCHCFCS---VIQLFDEMPQRYIHGREIHFELVDYIKLC--LKKPKIVTATVAHCA 116

Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
            LK+G  + +   +  +  Y+K+G+  S++  F +  + D +A+ A+V   + N  +  +
Sbjct: 117 ALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIA 176

Query: 164 KEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIM 220
            + F +M       +  +L  ++ AS  +K   +G  IH   +K G L  +   L NA++
Sbjct: 177 MDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDI--SLGNALV 234

Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEY 277
           ++Y +CG    +  +++EI   D VSW+  +  +       +A   FK + F++   +  
Sbjct: 235 DMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNV 294

Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
           ++   +S+      L  G+ +     K+G+   VS+ N+LIS+Y +C  +  A ++F  +
Sbjct: 295 SLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREI 354

Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQA 396
             KD VSWN+M+ G++ NG   +  D+   M +     P+  T+ ++L   +     ++ 
Sbjct: 355 ALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREG 414

Query: 397 MQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
             +H + I+   + D  M ++ LI  Y KCN + +++ + +   +K+ V  NA+ S   +
Sbjct: 415 RTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSH 474

Query: 456 ASCHAEALELYRTI--WGSCREVNGSTFSIVLKACAAM--TDLEQGKAIHCLALKARYDQ 511
                EA  L+  +  WG     + ST   +L +C ++    +  GK++HC  LK+ +  
Sbjct: 475 NRYSEEAQNLFTEMLRWGP--NCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLN 532

Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDS----LAGWNAMMMGYAQHGCYHEVSNLF 567
            I + + ++ MY  CG   D   +F  +  +S    +A WN +++G  +   + E    F
Sbjct: 533 HILLINILMHMYINCG---DLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETF 589

Query: 568 NKMSK-FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
           N M +   +  D IT ++ L++C +  L    ++       LHGL
Sbjct: 590 NLMRQEPPLNYDSITLVSALSACANLELFNLGKS-------LHGL 627



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 184/361 (50%), Gaps = 16/361 (4%)

Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
           K+G +  +    +L+++Y K G    ++ +FD +  +D+++WN+++A   EN  +  A+D
Sbjct: 119 KIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMD 178

Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
            F  M++     +  T+  I+ A  + K+  Q   +H   IKSG L+D S+ + L+  Y 
Sbjct: 179 FFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYA 238

Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
           KC  L+ S+ +  EI+ K+AV  N++    +Y     +AL  ++ +  S    +  +   
Sbjct: 239 KCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCC 298

Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDS 543
            + A +++ +L  G+++H L +K  Y   + V +++I +Y +C  I+ A+  FR+I    
Sbjct: 299 AISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKD 358

Query: 544 LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKPDEITYLAVLTSCCHAGLVREARTYL 602
           +  WNAMM G+A +G   EV +L  +M K G  +PD +T + +L  C    L RE RT  
Sbjct: 359 IVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRT-- 416

Query: 603 SCMSDLHGLIPQLE----HYACIVDLLG---RVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
                +HG   + +    H   +  L+G   +  L+E A++  +      D   W +++S
Sbjct: 417 -----IHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTA-EKDTVSWNAMIS 470

Query: 656 A 656
            
Sbjct: 471 G 471


>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 606

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 172/540 (31%), Positives = 287/540 (53%), Gaps = 5/540 (0%)

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQIN 275
           ++  Y   G   +A  +F+EI E DVV+W+  I    +C+   +A+ +F ++  ++ Q N
Sbjct: 49  LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG-KCGQVNDARSIF 334
            +TM ++L +  G + L  G    +   K G    V + NAL+ MY   C  ++DA S+F
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           + +  K +VSW ++IAG++  G     L  F  ML   + PN ++ +    A ++  S  
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              Q+H+ + K G   D  +++ ++  Y +CN L ++KR   E+ +KN +  N L +   
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE 288

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
            +   +E+L L+  +     + N  TF+ +  ACA +  L  G+ +H   ++  +D+++ 
Sbjct: 289 RSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           + +++IDMY KCG+I D+ + F  +    L  W  MM+GY  HG   E   LF++M + G
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSG 407

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++PD I ++ VL  C HAGLV +   Y   M + + + P  E Y C+VDLLGR G +E A
Sbjct: 408 IQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEA 467

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              ++ MP  PD  +W +LL AC  Y   +LG LA  ++L+ +P+   TY+LLS +YA+ 
Sbjct: 468 FQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAE 527

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G W +  K+RK MK     KE G SWI +    + F  G       + ++K +  L  HM
Sbjct: 528 GKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHM 587



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 205/433 (47%), Gaps = 12/433 (2%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           + +T LI  +      R A     +   RD++T+ A+I G         A  +F  +   
Sbjct: 44  VWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKS-GEIVS 131
            ++P+AFT SS++KAC  ++      + H +  K G    VY+ +  ++ YA S   +  
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDD 163

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F D      V++T ++ G+   G+       F +M    +  N FS +    A   
Sbjct: 164 ALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACAS 223

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +     G+QIH    K G        + N+I+++Y RC    DA + F E+TE ++++W+
Sbjct: 224 ISSYSCGKQIHAAVTKYGLHCDA--PVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWN 281

Query: 249 ERIAA--ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
             IA     D  E+  LF  +    ++ N +T  ++ ++     +L  G+Q+     + G
Sbjct: 282 TLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRG 341

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F + V++ N+LI MY KCG ++D+  +F  +  +D VSW +M+ GY  +G+  +A+ +F 
Sbjct: 342 FDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFD 401

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKC 425
            M++  + P+      +L   S++  + + ++    +++   +  D  I  C++   G+ 
Sbjct: 402 EMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRA 461

Query: 426 NALNESKRVLSEI 438
             + E+ +++  +
Sbjct: 462 GRVEEAFQLVENM 474



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 4/189 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K G H D  +  +++  + +      A R   +   +++IT+N LI+G  R  
Sbjct: 232 QIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYER-S 290

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
            S  +L LF ++  +G +P+ FTF+S+  AC +L      + VHG  ++ GF   V L++
Sbjct: 291 DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALIN 350

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  +   F D    D V++T M+ GY  +G   ++ ++F EM   G++ 
Sbjct: 351 SLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQP 410

Query: 178 NEFSLTAVL 186
           +      VL
Sbjct: 411 DRIVFMGVL 419


>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
 gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
          Length = 625

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 188/626 (30%), Positives = 323/626 (51%), Gaps = 13/626 (2%)

Query: 75  QGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
           +G RP+  TFS +  +C   +E + +        F S V + +  +  Y +SG++ SA  
Sbjct: 4   EGFRPNGVTFSGVASSCSGREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARK 63

Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA--SFDV 192
            F    + D +++ +MV  Y  +G  ++  E+F   R + +E +  +  ++LGA  + ++
Sbjct: 64  VFDSIENKDLISWNSMVVAYSQHGHGEEMLELF---RKMDVEPDSITYASILGACSAMEL 120

Query: 193 KE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
            E G+++H    +  F S     L  A++N+Y +CG    A ++FD I   D   W+  I
Sbjct: 121 LELGKEVHARVSRSRFKSDPA--LAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMI 178

Query: 252 AAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
           +         EA GLF+ ++    +I++ + + +LS+      L  G +I       G  
Sbjct: 179 SGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMD 238

Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV-SWNSMIAGYSENGFFNQALDMFCH 367
           + + +  A+ +MY KC QV+ AR +FD +  K +V SWNSMIA Y+++G   +AL+++  
Sbjct: 239 KDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYEL 298

Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
           M E  + P+  T A  L A ++     +  ++HS I +S    D  + + ++  Y KC  
Sbjct: 299 MKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGE 358

Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
           L  +     ++ +KNAV  +A+    +      EAL+LY  +     + +  T +  L A
Sbjct: 359 LETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAA 418

Query: 488 CAAMTDLEQGKAIHCLALKARYDQD-IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
           C+ +  L++GKAIH         Q+ +F+++++++MY KCG +  A   F  + R     
Sbjct: 419 CSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFS 478

Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
           WN +++G+A HG   EV +L  +M + GV PD +T+  VL +C HAGL+   R++   M+
Sbjct: 479 WNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMT 538

Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
             + + P L+HY C+VD+L R G    A+     MP  P    W +LL AC ++G    G
Sbjct: 539 GDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHGETKRG 598

Query: 667 LLAGSKLLELQPDNESTYVLLSNLYA 692
           + A   LLEL  +  S+YVLLSNL A
Sbjct: 599 VEAARSLLELGFECSSSYVLLSNLVA 624



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 258/519 (49%), Gaps = 37/519 (7%)

Query: 12  HLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDR 71
           H + ++  +L+S +T+  D R A +     +N+D+I++N+++     + Q G   ++ + 
Sbjct: 39  HSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVA---YSQHGHGEEMLEL 95

Query: 72  LRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
            R   + PD+ T++S++ AC +++  E+   VH    +  F S   L +  I  Y+K G 
Sbjct: 96  FRKMDVEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGV 155

Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
           + SA   F     +D   + AM+ G V +G   ++  +F  M++  + +++ S   +L A
Sbjct: 156 LESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSA 215

Query: 189 SF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDV 244
                D+ EG +IH      G    +   +  A+ N+Y +C Q   A KMFD + E  +V
Sbjct: 216 CCALEDLHEGIRIHEHASACGMDKDLV--VETAVFNMYSKCRQVDLARKMFDGMNEKTNV 273

Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLL---SSVGGERILRAGKQI 298
           VSW+  IAA   +  G EA  L++ ++    Q ++ T    L   +S GG      G +I
Sbjct: 274 VSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGS---AKGAEI 330

Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
            +   +      V +  A+++MY KCG++  A S F+ +  K++V+W++M+  + + G+ 
Sbjct: 331 HSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYD 390

Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI-----IKSGFLLDDS 413
            +ALD++  M+     P+  T+A  L A S   +L++   +HS I     +++   L +S
Sbjct: 391 REALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNS 450

Query: 414 MISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA---EALELYRTIW 470
               L+  Y KC  L  +  + S + ++++   N   +++V  + H    E L L+  + 
Sbjct: 451 ----LLNMYAKCGCLAIANTMFSNLQRRDSFSWN---TIIVGHAHHGDVDEVLSLHGEMV 503

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
               + +  TF+ VL AC+    L++G++ H L++   Y
Sbjct: 504 QDGVDPDYVTFACVLLACSHAGLLDRGRS-HFLSMTGDY 541



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 203/406 (50%), Gaps = 13/406 (3%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           ++++ + ++    DP L+  LI+ ++K      A R     Q+ D   +NA+ISGL +  
Sbjct: 126 EVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHG 185

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
           ++  AL LF+R++ + +R D  ++ +++ AC +L+   E   +H      G    + + +
Sbjct: 186 RAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVET 245

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
                Y+K  ++  A   F    +  N V++ +M+  Y  +G   ++ E++  M+  G++
Sbjct: 246 AVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQ 305

Query: 177 LNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
            ++ +    LGA        +G +IH    +    + V   L+ AI+N+Y +CG+   A+
Sbjct: 306 PDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDV--FLDTAIVNMYAKCGELETAM 363

Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
             F+++   + V+WS  + A        EA  L+  +    FQ +E T+   L++     
Sbjct: 364 SYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIG 423

Query: 291 ILRAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
            L+ GK I +       ++  + + N+L++MY KCG +  A ++F  L  +DS SWN++I
Sbjct: 424 ALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTII 483

Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQ 395
            G++ +G  ++ L +   M++  + P+  T A +L A S++  L +
Sbjct: 484 VGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDR 529


>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
          Length = 688

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 193/655 (29%), Positives = 315/655 (48%), Gaps = 46/655 (7%)

Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-- 177
           ++  A+S  +  A   F      D VAY  ++ G+   G+F  +  +F  +R+    L  
Sbjct: 32  LKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAP 91

Query: 178 -NEFSLTAVL---GASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
            + F L+ V     A+ D +       +H F          C  L               
Sbjct: 92  ADPFVLSLVFKSCAAAADARFLPHAASLHAFAAG-------CLGL--------------- 129

Query: 231 DAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
            A+K+FDE+   +VVSW+  +A+   A    EA   F ++R +    + Y     L++  
Sbjct: 130 -ALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 188

Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
              +L  G+++ AFC K+G      + N L ++Y +C  V+ A +    +  +D  +W +
Sbjct: 189 DAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTT 248

Query: 348 MIAGYSENGFFNQALDMFCHMLE----FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
           +I+ Y + G   +A++ F  ML      +  PN YT A+++ A ++   +    Q+H+  
Sbjct: 249 VISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQA 308

Query: 404 IKSGFLLDDSMISCLITTYGKCNA-LNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
            + GF    S+ + L+T Y +    L+ +  V  E   K+ V  +A+ S         +A
Sbjct: 309 ARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDA 368

Query: 463 LELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
             L+R +     C   N  T + +L  CA    L+ G+ +H LA+ A  +    + SA+I
Sbjct: 369 FALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALI 428

Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
           DMY K G++ DA   F    +D +  W AM++GYA+HG   +   LF +M   G+KPD +
Sbjct: 429 DMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHV 488

Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQ 640
           T++ VL +CCHAG V     YL+ M+ ++GL P  EHY C+VDLLGR G +  A+  I +
Sbjct: 489 TFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGK 548

Query: 641 MPI-PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
           +     D  +W SLL AC   G  + G  A  + +E +P     +V ++NLYAS G W++
Sbjct: 549 IAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHE 608

Query: 700 VGKLRKEMKEKFLCKEPGYSWIHVGGYTHH---FYAGDSSHSQSKEIYKELIKLY 751
             + R  MK+K + K  G+S I VGG       F A D +H Q   IY+ L  +Y
Sbjct: 609 AAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELIY 663



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 247/540 (45%), Gaps = 56/540 (10%)

Query: 34  AFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-- 91
           A +   +  +++++++  L++ L R  +   AL+ F  +R  G+  D++ +++ + AC  
Sbjct: 130 ALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACAD 189

Query: 92  -GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
            G L     VH  C KLG  S  Y+ +     YA+  ++  A          D  A+T +
Sbjct: 190 AGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTV 249

Query: 151 VCGYVWNGEFDKSKEVFVEM----RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGV 203
           +  YV  G   ++ E FV M     S+    NE++  AV+ A  D+     GEQ+H    
Sbjct: 250 ISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAA 309

Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAV-KMFDEITEPDVVSWSERIAA-ACDGV--E 259
           + GF       + N+++ LY R    L A   +F E    DVVSWS  I+  A +G+  +
Sbjct: 310 RKGF--ACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAED 367

Query: 260 AFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
           AF LF+++R +    + NE+T+ +LLS       L AG+Q+       G      I +AL
Sbjct: 368 AFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSAL 427

Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
           I MYGK G + DA  +F + +  D VSW +MI GY+E+G   +AL++F  M    L P+ 
Sbjct: 428 IDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDH 487

Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIK-SGFLLDDSMISCLITTYGKCNALNESKRVLS 436
            T   +L A  ++  ++  ++  + + +  G         C++   G+   +NE++ ++ 
Sbjct: 488 VTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIG 547

Query: 437 EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQ 496
           +I                                 +  E +G  ++ +L+ACAA  + E 
Sbjct: 548 KI---------------------------------AANERDGVVWTSLLRACAARGEEET 574

Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL---AGWNAMMMG 553
           GK     A++A          A+ ++Y   G   +A +    + +  +   AGW+++ +G
Sbjct: 575 GKKAAERAMEAE-PWGAGAHVAMANLYASKGQWHEAAQERHMMKQKGVVKGAGWSSITVG 633



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 252/583 (43%), Gaps = 72/583 (12%)

Query: 15  PILSTTLISHFTKFADFRRAFRF-----LFD-TQNRDIITYNALISGLARFCQSGPALKL 68
           P LS  ++ H  +     R+ R      LFD    RD + Y  L++G A       A+ L
Sbjct: 21  PPLS--MLDHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMAL 78

Query: 69  FDRLRYQG--LRP-DAFTFSSLVKACGSLQENE-IVHGVCLK------LGFSSRVYLVSG 118
           F RLR     L P D F  S + K+C +  +   + H   L       LG + +V+    
Sbjct: 79  FSRLRASSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAAGCLGLALKVF---- 134

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
                         EM  ++      V++T +V      G   ++   F EMR+ G+  +
Sbjct: 135 -------------DEMPHKNV-----VSWTTLVASLTRAGRRHEALRRFSEMRASGVHCD 176

Query: 179 EFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
            ++  A L A  D   +  G ++H F  K+G  S    ++ N +  LY RC     A+  
Sbjct: 177 SYAYAAALTACADAGLLSRGREVHAFCAKLGLDS--TPYVANTLATLYARCSDVDRALAA 234

Query: 236 FDEITEPDVVSWSERIAA------ACDGVEAF-GLFKDLRFNDFQINEYTMINLLSSVGG 288
              +   DV +W+  I+A      A + +EAF  + ++        NEYT   ++++   
Sbjct: 235 VSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACAD 294

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK-CGQVNDARSIFDYLIFKDSVSWNS 347
              +  G+Q+ A   + GF    S+ N+L+++Y +  G ++ A ++F   + KD VSW++
Sbjct: 295 IAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSA 354

Query: 348 MIAGYSENGFFNQALDMFCHMLEFS--LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
           +I+GY++ G    A  +F  M   S    PN +T+AS+L   + + SL    Q+H+  + 
Sbjct: 355 IISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVA 414

Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALEL 465
           +G      + S LI  YGK  ++ ++  V S   K + V   A+           +ALEL
Sbjct: 415 AGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALEL 474

Query: 466 YRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-------KAIHCL-ALKARYDQDIFVES 517
           ++ +     + +  TF  VL AC    ++E G         I+ L   K  Y        
Sbjct: 475 FQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHY-------G 527

Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAG--WNAMMMGYAQHG 558
            V+D+  + G I +A+    KI  +   G  W +++   A  G
Sbjct: 528 CVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARG 570



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 27/281 (9%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARF 59
           Q+++   + G      ++ +L++ +T+ A    A   +F ++  +D+++++A+ISG A+ 
Sbjct: 303 QLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQE 362

Query: 60  CQSGPALKLFDRLRYQG--LRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
             +  A  LF  +R+     RP+ FT +SL+  C    SL     +H + +  G      
Sbjct: 363 GLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAM 422

Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
           + S  I+ Y KSG ++ A++ F   +  D V++TAM+ GY  +G   K+ E+F EM  +G
Sbjct: 423 IRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVG 482

Query: 175 LELNEFSLTAVLGASFDVKEGE----------QIHGFGVKVGFLSGVCNHLNNAIMNLYV 224
           L+ +  +   VL A     E E          QI+G       L     H    +++L  
Sbjct: 483 LKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYG-------LYPAKEHY-GCVVDLLG 534

Query: 225 RCGQKLDAVKMFDEIT--EPDVVSWSERIAA-ACDGVEAFG 262
           R G+  +A ++  +I   E D V W+  + A A  G E  G
Sbjct: 535 RAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETG 575



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 31/284 (10%)

Query: 316 ALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS--L 373
           A +    +  ++ DA  +FD +  +D V++ +++AG++  G F  A+ +F  +   S  L
Sbjct: 30  ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPL 89

Query: 374 IPNGYTMASIL----EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
            P    + S++     A ++++ L  A  +H+                          L 
Sbjct: 90  APADPFVLSLVFKSCAAAADARFLPHAASLHAF---------------------AAGCLG 128

Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
            + +V  E+  KN V    L + L  A    EAL  +  +  S    +   ++  L ACA
Sbjct: 129 LALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 188

Query: 490 AMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNA 549
               L +G+ +H    K   D   +V + +  +Y +C  ++ A  A  ++    +A W  
Sbjct: 189 DAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTT 248

Query: 550 MMMGYAQHGCYHEVSNLFNKM----SKFGVKPDEITYLAVLTSC 589
           ++  Y Q G   E    F +M    S     P+E TY AV+ +C
Sbjct: 249 VISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAAC 292


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/527 (31%), Positives = 282/527 (53%), Gaps = 25/527 (4%)

Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
           A ++FD++ + DV+SW+  I+    +G+     G++K + +    ++  T+I++L     
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
              L  GK + +   K  F   ++  N L+ MY KCG ++ A  +F+ +  ++ VSW SM
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
           IAGY+ +G+ + A+ +   M +  +  +   + SIL A + S SL     VH +I  +  
Sbjct: 324 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
             +  + + L+  Y KC ++  +  V S +  K+ +  N +   L               
Sbjct: 384 ASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL--------------- 428

Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
                 + +  T + +L ACA+++ LE+GK IH   L+  Y  D  V +A++D+Y KCG 
Sbjct: 429 ------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482

Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
           +  A+  F  I    L  W  M+ GY  HG  +E    FN+M   G++PDE++++++L +
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542

Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
           C H+GL+ +   +   M +   + P+LEHYAC+VDLL R G L  A   I+ +PI PDA 
Sbjct: 543 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDAT 602

Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
           IW +LL  C IY +I+L      ++ EL+P+N   YVLL+N+YA A    +V ++R+++ 
Sbjct: 603 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIG 662

Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAG-DSSHSQSKEIYKELIKLYEHM 754
           +K L K PG SWI + G  + F +G +SSH  SK+I   L K+   M
Sbjct: 663 KKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKM 709



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 219/449 (48%), Gaps = 55/449 (12%)

Query: 21  LISHFTKFADFRRA---FRF----------------LFDTQ-NRDIITYNALISGLARFC 60
           ++S + K  DF+ +   F+                 LFD   +RD+I++N++ISG     
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNG 230

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
            +   L ++ ++ Y G+  D  T  S++  C   G+L   + VH + +K  F  R+   +
Sbjct: 231 LTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSN 290

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             ++ Y+K G++  A   F    + + V++T+M+ GY  +G  D +  +  +M   G++L
Sbjct: 291 TLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKL 350

Query: 178 NEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCGQKLD 231
           +  ++T++L A   S  +  G+ +H + +K   ++    VC    NA+M++Y +CG    
Sbjct: 351 DVVAITSILHACARSGSLDNGKDVHDY-IKANNMASNLFVC----NALMDMYAKCGSMEG 405

Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
           A  +F  +   D++SW+  +                   + + +  TM  +L +      
Sbjct: 406 ANSVFSTMVVKDIISWNTMVG------------------ELKPDSRTMACILPACASLSA 447

Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
           L  GK+I  +  + G+     + NAL+ +Y KCG +  AR +FD +  KD VSW  MIAG
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 507

Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
           Y  +G+ N+A+  F  M +  + P+  +  SIL A S+S  L+Q  +   +I+K+ F ++
Sbjct: 508 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIE 566

Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
             +   +C++    +   L+++ + +  +
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKAYKFIETL 595



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 134/604 (22%), Positives = 263/604 (43%), Gaps = 70/604 (11%)

Query: 22  ISHFTKFADFRRAFRFLFDTQNRDI--ITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
           I HF +  D   A   +   Q  ++   TY +++   A         K+   ++   +  
Sbjct: 73  ILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGV 132

Query: 80  D---AFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV------ 130
           D        S    CG L+E   V     K      VYL +  +  YAK G+        
Sbjct: 133 DEALGLKLVSFYATCGDLKEGRRVFDTMEK----KNVYLWNFMVSEYAKIGDFKESICLF 188

Query: 131 --------------SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
                         SA   F    D D +++ +M+ GYV NG  ++   ++ +M  LG++
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248

Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
           ++  ++ +VL     S  +  G+ +H   +K  F   +  + +N ++++Y +CG    A+
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI--NFSNTLLDMYSKCGDLDGAL 306

Query: 234 KMFDEITEPDVVSWSERIAAAC-DGVE--AFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
           ++F+++ E +VVSW+  IA    DG    A  L + +     +++   + ++L +     
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
            L  GK +  +         + + NAL+ MY KCG +  A S+F  ++ KD +SWN+M+ 
Sbjct: 367 SLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG 426

Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
                                 L P+  TMA IL A ++  +L++  ++H +I+++G+  
Sbjct: 427 ---------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSS 465

Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
           D  + + L+  Y KC  L  ++ +   I  K+ V    + +         EA+  +  + 
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGT 528
            +  E +  +F  +L AC+    LEQG     + +K  ++ +  +E  + ++D+  + G 
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGN 584

Query: 529 IEDAKRAFR--KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLA 584
           +  A +      I  D+   W A++ G      YH++  L  K+++  F ++P+   Y  
Sbjct: 585 LSKAYKFIETLPIAPDATI-WGALLCGCR---IYHDIE-LAEKVAERVFELEPENTGYYV 639

Query: 585 VLTS 588
           +L +
Sbjct: 640 LLAN 643



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 180/463 (38%), Gaps = 86/463 (18%)

Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
           +N+ I  + + G    A+++ C   +  L    Y   S+L+  +  KSL    +VHS I 
Sbjct: 69  YNAKILHFCQLGDLENAMELVCMCQKSELETKTY--GSVLQLCAGLKSLTDGKKVHSIIK 126

Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKN---------------------- 442
            +   +D+++   L++ Y  C  L E +RV   ++KKN                      
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 443 -----------------------------AVHINALASVLVYASCHAEALELYRTIWGSC 473
                                         +  N++ S  V        L +Y+ +    
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
            +V+ +T   VL  CA    L  GKA+H LA+K+ +++ I   + ++DMY KCG ++ A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
           R F K+   ++  W +M+ GY + G       L  +M K GVK D +   ++L +C  +G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 594 LVREARTYLSCMSDLHGLIPQLEH----YAC--IVDLLGRVGLLEGAKMTIDQM------ 641
            +   +       D+H  I         + C  ++D+  + G +EGA      M      
Sbjct: 367 SLDNGK-------DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDII 419

Query: 642 -------PIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVLLSNLYAS 693
                   + PD+     +L AC     ++ G  + G  L      +      L +LY  
Sbjct: 420 SWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSW-IHVGGYTHHFYAGDS 735
            G+      L   +  K L      SW + + GY  H Y  ++
Sbjct: 480 CGVLGLARLLFDMIPSKDLV-----SWTVMIAGYGMHGYGNEA 517



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 167/359 (46%), Gaps = 30/359 (8%)

Query: 2   IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
           ++SL IK+        S TL+  ++K  D   A R       R+++++ ++I+G  R   
Sbjct: 273 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGW 332

Query: 62  SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
           S  A+ L  ++  +G++ D    +S++ AC   GSL   + VH        +S +++ + 
Sbjct: 333 SDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNA 392

Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
            ++ YAK G +  A   F   +  D +++  MV             E+  + R++   L 
Sbjct: 393 LMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------------GELKPDSRTMACIL- 439

Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
                A L A   ++ G++IHG+ ++ G+ S    H+ NA+++LYV+CG    A  +FD 
Sbjct: 440 --PACASLSA---LERGKEIHGYILRNGYSSD--RHVANALVDLYVKCGVLGLARLLFDM 492

Query: 239 ITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
           I   D+VSW+  IA       G EA   F ++R    + +E + I++L +     +L  G
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 296 KQIQAFCYKVGFMEVVSIGN--ALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
            +   +  K  F     + +   ++ +  + G ++ A    + L I  D+  W +++ G
Sbjct: 553 WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610


>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 594

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 172/540 (31%), Positives = 287/540 (53%), Gaps = 5/540 (0%)

Query: 219 IMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQIN 275
           ++  Y   G   +A  +F+EI E DVV+W+  I    +C+   +A+ +F ++  ++ Q N
Sbjct: 49  LIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPN 108

Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYG-KCGQVNDARSIF 334
            +TM ++L +  G + L  G    +   K G    V + NAL+ MY   C  ++DA S+F
Sbjct: 109 AFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVF 168

Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
           + +  K +VSW ++IAG++  G     L  F  ML   + PN ++ +    A ++  S  
Sbjct: 169 NDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYS 228

Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
              Q+H+ + K G   D  +++ ++  Y +CN L ++KR   E+ +KN +  N L +   
Sbjct: 229 CGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE 288

Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
            +   +E+L L+  +     + N  TF+ +  ACA +  L  G+ +H   ++  +D+++ 
Sbjct: 289 RSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVA 347

Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
           + +++IDMY KCG+I D+ + F  +    L  W  MM+GY  HG   E   LF++M + G
Sbjct: 348 LINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSG 407

Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
           ++PD I ++ VL  C HAGLV +   Y   M + + + P  E Y C+VDLLGR G +E A
Sbjct: 408 IQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEA 467

Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
              ++ MP  PD  +W +LL AC  Y   +LG LA  ++L+ +P+   TY+LLS +YA+ 
Sbjct: 468 FQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAE 527

Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
           G W +  K+RK MK     KE G SWI +    + F  G       + ++K +  L  HM
Sbjct: 528 GKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHM 587



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 204/433 (47%), Gaps = 12/433 (2%)

Query: 16  ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQ 75
           + +T LI  +      R A     +   RD++T+ A+I G         A  +F  +   
Sbjct: 44  VWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103

Query: 76  GLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENYAKS-GEIVS 131
            ++P+AFT SS++KAC  ++      + H +  K G    VY+ +  ++ YA S   +  
Sbjct: 104 EVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDD 163

Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD 191
           A   F D      V++T ++ G+   G+       F +M    +  N FS +    A   
Sbjct: 164 ALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACAS 223

Query: 192 VKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS 248
           +     G+QIH    K G        + N+I+++Y RC    DA + F E+TE ++++W+
Sbjct: 224 ISSYSCGKQIHAAVTKYGLHCDA--PVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWN 281

Query: 249 ERIAA--ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
             IA     D  E+  LF  +    ++ N +T  ++ ++     +L  G+Q+     + G
Sbjct: 282 TLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRG 341

Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
           F + V++ N+LI MY KCG ++D+  +F  +  +D VSW +M+ GY  +G+  +A+ +F 
Sbjct: 342 FDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFD 401

Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKC 425
            M++  + P+      +L   S++  + + ++    +++      D  +  C++   G+ 
Sbjct: 402 EMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRA 461

Query: 426 NALNESKRVLSEI 438
             + E+ +++  +
Sbjct: 462 GRVEEAFQLVENM 474



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 4/189 (2%)

Query: 1   QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
           QI++ + K G H D  +  +++  + +      A R   +   +++IT+N LI+G  R  
Sbjct: 232 QIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYER-S 290

Query: 61  QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
            S  +L LF ++  +G +P+ FTF+S+  AC +L      + VHG  ++ GF   V L++
Sbjct: 291 DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALIN 350

Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
             I+ YAK G I  +   F D    D V++T M+ GY  +G   ++ ++F EM   G++ 
Sbjct: 351 SLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQP 410

Query: 178 NEFSLTAVL 186
           +      VL
Sbjct: 411 DRIVFMGVL 419


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.137    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,446,020,138
Number of Sequences: 23463169
Number of extensions: 463251940
Number of successful extensions: 1551940
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8749
Number of HSP's successfully gapped in prelim test: 2539
Number of HSP's that attempted gapping in prelim test: 1317934
Number of HSP's gapped (non-prelim): 82083
length of query: 760
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 609
effective length of database: 8,816,256,848
effective search space: 5369100420432
effective search space used: 5369100420432
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 81 (35.8 bits)