BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041183
(760 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/757 (33%), Positives = 413/757 (54%), Gaps = 17/757 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTK--FADF-RRAFRFLFDTQNRDIITYNALISGLA 57
QI++ ++ G ++ LI +++ F D RR F L + +D ++ A+ISGL+
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL---RLKDHSSWVAMISGLS 264
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVY 114
+ A++LF + G+ P + FSS++ AC ++ EI +HG+ LKLGFSS Y
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ + + Y G ++SAE F + D V Y ++ G G +K+ E+F M G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
LE + +L +++ A + G+Q+H + K+GF S N + A++NLY +C
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN--NKIEGALLNLYAKCADIET 442
Query: 232 AVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A+ F E +VV W+ + A D +F +F+ ++ + N+YT ++L +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
L G+QI + K F + + LI MY K G+++ A I KD VSW +M
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
IAGY++ F ++AL F ML+ + + + + + A + ++LK+ Q+H+ SGF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
D + L+T Y +C + ES + + + + NAL S + + EAL ++
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
+ + N TF +KA + +++QGK +H + K YD + V +A+I MY KCG+
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
I DA++ F ++ + WNA++ Y++HG E + F++M V+P+ +T + VL++
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
C H GLV + Y M+ +GL P+ EHY C+VD+L R GLL AK I +MPI PDA
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
+W++LLSAC ++ N+++G A LLEL+P++ +TYVLLSNLYA + W+ R++MK
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922
Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
EK + KEPG SWI V H FY GD +H + EI++
Sbjct: 923 EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 181/756 (23%), Positives = 339/756 (44%), Gaps = 49/756 (6%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
+++S ++K G + LS L + D AF+ + R I T+N +I LA
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQEN--EIVHGVCLKLGFSSRVYLV 116
G LF R+ + + P+ TFS +++AC GS+ + E +H L G +
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
+ I+ Y+++G + A F D+ ++ AM+ G N ++ +F +M LG+
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
++ ++VL A ++ GEQ+HG +K+GF S ++ NA+++LY G + A
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT--YVCNALVSLYFHLGNLISAE 343
Query: 234 KMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
+F +++ D V+++ I G +A LFK + + + + T+ +L+ + +
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
L G+Q+ A+ K+GF I AL+++Y KC + A F ++ V WN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
Y + +F M ++PN YT SIL+ L+ Q+HS IIK+ F L
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
+ + S LI Y K L+ + +L K+ V + + + +AL +R +
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
+ + + ACA + L++G+ IH A + + D+ ++A++ +Y +CG IE
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
++ AF + WNA++ G+ Q G E +F +M++ G+ + T+ + + +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 591 HAGLVREART-----------------------YLSC--MSDLHGLIPQLE-----HYAC 620
+++ + Y C +SD ++ +
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 621 IVDLLGRVGLLEGAKMTIDQM---PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKL---L 674
I++ + G A + DQM + P+ +LSAC+ G +D G+ +
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
L P E YV + ++ AG+ + + +EM K
Sbjct: 824 GLSPKPEH-YVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 159/612 (25%), Positives = 269/612 (43%), Gaps = 25/612 (4%)
Query: 67 KLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLVSGFIEN 122
K D + +G+RP+ T L++ C GSL E +H LKLG S L +
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 123 YAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSL 182
Y G++ A F + + + M+ + +FV M S + NE +
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 183 TAVLGA------SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLYVRCGQKLDAVK 234
+ VL A +FDV EQIH + G VCN L ++LY R G A +
Sbjct: 190 SGVLEACRGGSVAFDVV--EQIHARILYQGLRDSTVVCNPL----IDLYSRNGFVDLARR 243
Query: 235 MFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
+FD + D SW I+ C+ EA LF D+ Y ++LS+
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEA-EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
L G+Q+ K+GF + NAL+S+Y G + A IF + +D+V++N++I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
G S+ G+ +A+++F M L P+ T+AS++ A S +L + Q+H++ K GF
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
++ + L+ Y KC + + E + +N V N + + ++R +
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
N T+ +LK C + DLE G+ IH +K + + +V S +IDMY K G ++
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
A + + W M+ GY Q+ + F +M G++ DE+ +++C
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 591 HAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIW 650
++E + + + + G L +V L R G +E + + +Q D W
Sbjct: 603 GLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAW 660
Query: 651 QSLLSACTIYGN 662
+L+S GN
Sbjct: 661 NALVSGFQQSGN 672
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 237/504 (47%), Gaps = 20/504 (3%)
Query: 182 LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
L L + + EG ++H +K+G S C L+ + + Y+ G A K+FDE+ E
Sbjct: 91 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGC--LSEKLFDFYLFKGDLYGAFKVFDEMPE 148
Query: 242 PDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSV-GGERILRAGKQ 297
+ +W++ I E FGLF + + NE T +L + GG +Q
Sbjct: 149 RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ 208
Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
I A G + + N LI +Y + G V+ AR +FD L KD SW +MI+G S+N
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
+A+ +FC M ++P Y +S+L A +SL+ Q+H ++K GF D + +
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
L++ Y L ++ + S + +++AV N L + L +A+EL++ + E +
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
+T + ++ AC+A L +G+ +H K + + +E A++++Y KC IE A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
+ +++ WN M++ Y +F +M + P++ TY ++L +C G
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG---- 504
Query: 598 ARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
L +H I QL Y C ++D+ ++G L+ A + + D W
Sbjct: 505 ---DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWT 560
Query: 652 SLLSACTIYGNIDLGLLAGSKLLE 675
++++ T Y D L ++L+
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLD 584
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 252/766 (32%), Positives = 410/766 (53%), Gaps = 17/766 (2%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLF-DTQNRDIITYNALISGLARFC 60
++ + GH D + T+I+ + + + A R LF + + D++ +N +ISG +
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA-RLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
A++ F +R ++ T S++ A G +L +VH +KLG +S +Y+ S
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
+ Y+K ++ +A F + ++V + AM+ GY NGE K E+F++M+S G +
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
++F+ T++L AS D++ G Q H +K + + NA++++Y +CG DA +
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL--FVGNALVDMYAKCGALEDARQ 484
Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
+F+ + + D V+W+ I + + EAF LFK + + + + L +
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
L GKQ+ K G + G++LI MY KCG + DAR +F L VS N++IAG
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
YS+N +A+ +F ML + P+ T A+I+EA +SL Q H I K GF +
Sbjct: 605 YSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 412 DSMIS-CLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
+ L+ Y + E+ + SE+ K+ V + S + EAL+ Y+ +
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
+ +TF VL+ C+ ++ L +G+AIH L +D D + +IDMY KCG +
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 530 EDAKRAFRKICRDS-LAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
+ + + F ++ R S + WN+++ GYA++G + +F+ M + + PDEIT+L VLT+
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
C HAG V + R M +G+ +++H AC+VDLLGR G L+ A I+ + PDA
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
+W SLL AC I+G+ G ++ KL+EL+P N S YVLLSN+YAS G W LRK M+
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
++ + K PGYSWI V TH F AGD SHS+ +I L LY+ M
Sbjct: 964 DRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLM 1009
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 192/741 (25%), Positives = 332/741 (44%), Gaps = 84/741 (11%)
Query: 39 FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE 98
FD +D+ +N+++S + + G L+ F L + P+ FTFS ++ C E
Sbjct: 118 FDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVE 177
Query: 99 I---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV 155
+H +K+G Y ++ YAK I A F +D + V +T + GYV
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237
Query: 156 WNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHL 215
G +++ VF MR G + + V+
Sbjct: 238 KAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----------------------------- 268
Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA----ACDGVEAFGLFKDLRFND 271
N Y+R G+ DA +F E++ PDVV+W+ I+ C+ V A F ++R +
Sbjct: 269 -----NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV-AIEYFFNMRKSS 322
Query: 272 FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDAR 331
+ T+ ++LS++G L G + A K+G + +G++L+SMY KC ++ A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 332 SIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
+F+ L K+ V WN+MI GY+ NG ++ +++F M + +T S+L + S
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
L+ Q HS IIK + + + L+ Y KC AL +++++ + ++ V N +
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
V +EA +L++ + +G+ + LKAC + L QGK +HCL++K D+
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
D+ S++IDMY KCG I+DA++ F + S+ NA++ GY+Q+ E LF +M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEML 621
Query: 572 KFGVKPDEITYLAVLTSC-----------CHAGLVREART----YLSC-----------M 605
GV P EIT+ ++ +C H + + + YL M
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 681
Query: 606 SDLHGLIPQLEHYACIVDLLGRV------GLLEGAKMTIDQMP---IPPDAHIWQSLLSA 656
++ L +L IV G + G E A +M + PD + ++L
Sbjct: 682 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRV 741
Query: 657 CTIYGNIDLGLLAGSKLLELQPD-NESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
C++ ++ G S + L D +E T L ++YA G ++ EM+ +
Sbjct: 742 CSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR----RS 797
Query: 716 PGYSWIH-VGGYTHHFYAGDS 735
SW + GY + YA D+
Sbjct: 798 NVVSWNSLINGYAKNGYAEDA 818
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/557 (25%), Positives = 263/557 (47%), Gaps = 47/557 (8%)
Query: 93 SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVC 152
+L+ + VH L LG S L + ++ YAK ++ AE F D L+ D A+ +M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133
Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLS 209
Y G+ K FV + + N+F+ + VL +V+ G QIH +K+G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 210 GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACDGVEAFGLFKD 266
++ A++++Y +C + DA ++F+ I +P+ V W+ A EA +F+
Sbjct: 194 N--SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 267 LRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
+R + + + +I+ Y + G+
Sbjct: 252 MRDEGHRPDHLAFVT-----------------------------------VINTYIRLGK 276
Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
+ DAR +F + D V+WN MI+G+ + G A++ F +M + S+ T+ S+L A
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
+ +L + VH+ IK G + + S L++ Y KC + + +V +++KN V
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALK 506
NA+ + + +EL+ + S ++ TF+ +L CAA DLE G H + +K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 507 ARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
+ +++FV +A++DMY KCG +EDA++ F ++C WN ++ Y Q E +L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHA-GLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
F +M+ G+ D + L +C H GL + + + C+S GL L + ++D+
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH--CLSVKCGLDRDLHTGSSLIDMY 574
Query: 626 GRVGLLEGAKMTIDQMP 642
+ G+++ A+ +P
Sbjct: 575 SKCGIIKDARKVFSSLP 591
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 219/505 (43%), Gaps = 71/505 (14%)
Query: 162 KSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIM 220
KS++VF EM + L L L + G+ +H + +G S L NAI+
Sbjct: 60 KSRKVFDEMPQRLALAL---------------RIGKAVHSKSLILGIDSE--GRLGNAIV 102
Query: 221 NLYVRCGQKLDAVKMFDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEY 277
+LY +C Q A K FD E DV +W+ ++ + + F L N N++
Sbjct: 103 DLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKF 161
Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
T +LS+ E + G+QI K+G G AL+ MY KC +++DAR +F+++
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
+ ++V W + +GY + G +A+ +F M + P+ ++
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-------------- 267
Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
I TY + L +++ + E+ + V N + S
Sbjct: 268 ---------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
C A+E + + S + ST VL A + +L+ G +H A+K +I+V S
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
+++ MY KC +E A + F + + WNAM+ GYA +G H+V LF M G
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLL 631
D+ T+ ++L++C A L S H +I + + +VD+ + G L
Sbjct: 427 DDFTFTSLLSTCA-------ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSA 656
E A+ ++M D W +++ +
Sbjct: 480 EDARQIFERM-CDRDNVTWNTIIGS 503
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 205/446 (45%), Gaps = 20/446 (4%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
Q +S++IK + + L+ + K D R+ F + D RD +T+N +I
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD---RDNVTWNTIIGSYV 505
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVY 114
+ A LF R+ G+ D +S +KAC L + + VH + +K G ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
S I+ Y+K G I A F + V+ A++ GY N +++ +F EM + G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRG 624
Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
+ +E + ++ A + G Q HG K GF S +L +++ +Y+ +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF-SSEGEYLGISLLGMYMNSRGMTE 683
Query: 232 AVKMFDEITEP-DVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
A +F E++ P +V W+ ++ EA +K++R + ++ T + +L
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS-VSWN 346
LR G+ I + + + N LI MY KCG + + +FD + + + VSWN
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWN 803
Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII-K 405
S+I GY++NG+ AL +F M + ++P+ T +L A S++ + ++ +I +
Sbjct: 804 SLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ 863
Query: 406 SGFLLDDSMISCLITTYGKCNALNES 431
G ++C++ G+ L E+
Sbjct: 864 YGIEARVDHVACMVDLLGRWGYLQEA 889
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/722 (32%), Positives = 384/722 (53%), Gaps = 18/722 (2%)
Query: 38 LFD-TQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE 96
LFD + RD +Y +L+ G +R ++ A +LF + G+ D FSS++K +L +
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 97 N---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
+H C+K GF V + + ++ Y K F + + + V +T ++ G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSG 210
Y N D+ +F+ M++ G + N F+ A LG + G Q+H VK G
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDL 267
+ ++N+++NLY++CG A +FD+ VV+W+ I+ A +G+ EA G+F +
Sbjct: 229 I--PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
R N +++E + +++ + LR +Q+ K GF+ +I AL+ Y KC +
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 328 NDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
DA +F + + VSW +MI+G+ +N +A+D+F M + PN +T + IL A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 387 VSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
+ + +VH+ ++K+ + ++ + L+ Y K + E+ +V S ID K+ V
Sbjct: 407 LP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW 462
Query: 447 NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT-DLEQGKAIHCLAL 505
+A+ + A++++ + + N TFS +L CAA + QGK H A+
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI 522
Query: 506 KARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSN 565
K+R D + V SA++ MY K G IE A+ F++ L WN+M+ GYAQHG + +
Sbjct: 523 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582
Query: 566 LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLL 625
+F +M K VK D +T++ V +C HAGLV E Y M + P EH +C+VDL
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642
Query: 626 GRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYV 685
R G LE A I+ MP P + IW+++L+AC ++ +LG LA K++ ++P++ + YV
Sbjct: 643 SRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYV 702
Query: 686 LLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYK 745
LLSN+YA +G W + K+RK M E+ + KEPGYSWI V T+ F AGD SH +IY
Sbjct: 703 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYM 762
Query: 746 EL 747
+L
Sbjct: 763 KL 764
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 275/556 (49%), Gaps = 28/556 (5%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ IK G D + T+L+ + K ++F+ + + + R+++T+ LISG AR
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI------VHGVCLKLGFSSRVY 114
+ L LF R++ +G +P++FTF++ A G L E + VH V +K G +
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAA---ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ + I Y K G + A + F V + +M+ GY NG ++ +F MR
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
+ L+E S +V+ ++KE EQ+H VK GFL ++ A+M Y +C LD
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL--FDQNIRTALMVAYSKCTAMLD 348
Query: 232 AVKMFDEIT-EPDVVSWSERIAA--ACDGV-EAFGLFKDLRFNDFQINEYTMINLLSSVG 287
A+++F EI +VVSW+ I+ DG EA LF +++ + NE+T +L+++
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
+ + ++ A K + ++G AL+ Y K G+V +A +F + KD V+W++
Sbjct: 409 ----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA-VSNSKSLKQAMQVHSHIIKS 406
M+AGY++ G A+ MF + + + PN +T +SIL + + S+ Q Q H IKS
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 407 GFLLDDSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
LD S+ S L+T Y K + ++ V +K+ V N++ S +AL+
Sbjct: 525 --RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582
Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMY 523
+++ + +++G TF V AC +E+G K + + S ++D+Y
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642
Query: 524 CKCGTIEDAKRAFRKI 539
+ G +E A + +
Sbjct: 643 SRAGQLEKAMKVIENM 658
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 135/262 (51%), Gaps = 8/262 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
++++ ++K + + T L+ + K A + ++DI+ ++A+++G A+
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC----GSLQENEIVHGVCLKLGFSSRVYLV 116
++ A+K+F L G++P+ FTFSS++ C S+ + + HG +K S + +
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
S + YAK G I SAE F+ + D V++ +M+ GY +G+ K+ +VF EM+ ++
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 177 LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
++ + V A V+EGE+ V+ ++ H N+ +++LY R GQ A+
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH-NSCMVDLYSRAGQLEKAM 652
Query: 234 KMFDEITEPDVVSWSERIAAAC 255
K+ + + P + I AAC
Sbjct: 653 KVIENMPNPAGSTIWRTILAAC 674
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%)
Query: 329 DARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVS 388
+A ++FD +D S+ S++ G+S +G +A +F ++ + + +S+L+ +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
Q+H IK GFL D S+ + L+ TY K + + ++V E+ ++N V
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
L S S + E L L+ + + N TF+ L A +G +H + +K
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
D+ I V +++I++Y KCG + A+ F K S+ WN+M+ GYA +G E +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVR 596
M V+ E ++ +V+ C + +R
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELR 312
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/766 (30%), Positives = 407/766 (53%), Gaps = 17/766 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLI---SHFTKFADFRRAFRFLFDTQNRDIITYNALISGLA 57
+I++L+I G S LI SHF + A FR + +N + +N++I +
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN--VYLWNSIIRAFS 82
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVY 114
+ AL+ + +LR + PD +TF S++KAC L + E +V+ L +GF S ++
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ + ++ Y++ G + A F + D V++ +++ GY +G ++++ E++ E+++
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
+ + F++++VL G VK+G+ +HGF +K +NN ++ +Y++ + D
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS--GVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A ++FDE+ D VS++ I E+ +F + + F+ + T+ ++L + G
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 319
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
R L K I + K GF+ ++ N LI +Y KCG + AR +F+ + KD+VSWNS+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
I+GY ++G +A+ +F M+ + T ++ + LK +HS+ IKSG
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
+D S+ + LI Y KC + +S ++ S + + V N + S V A L++
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
+ S + +TF + L CA++ GK IHC L+ Y+ ++ + +A+I+MY KCG
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
+E++ R F ++ R + W M+ Y +G + F M K G+ PD + ++A++ +
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
C H+GLV E M + + P +EHYAC+VDLL R + A+ I MPI PDA
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
IW S+L AC G+++ +++EL PD+ +L SN YA+ W+ V +RK +K
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
+K + K PGYSWI VG H F +GD S QS+ IYK L LY M
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 484 VLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICR-D 542
+ +A ++ ++L + + IH L + D F +ID Y + FR++
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
++ WN+++ ++++G + E + K+ + V PD+ T+ +V+ +C AGL +
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGL------FD 121
Query: 603 SCMSDL-------HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLS 655
+ M DL G L +VD+ R+GLL A+ D+MP+ D W SL+S
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLIS 180
Query: 656 ACTIYG 661
+ +G
Sbjct: 181 GYSSHG 186
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/765 (31%), Positives = 389/765 (50%), Gaps = 20/765 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFT---KFADFRRAFRFLFDTQNRDIITYNALISGLA 57
Q+++ LI N D ++ + F+D + F + D + I +N++IS
Sbjct: 56 QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-YRLDLRRSSIRPWNSIISSFV 114
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVY 114
R AL + ++ G+ PD TF LVKAC +L+ + + LG +
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF 174
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ S I+ Y + G+I F L D V + M+ GY G D + F MR
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVC--NHLNNAIMNLYVRCGQK 229
+ N + VL + + G Q+HG V +SGV + N+++++Y +CG+
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV----VSGVDFEGSIKNSLLSMYSKCGRF 290
Query: 230 LDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSV 286
DA K+F ++ D V+W+ I+ E+ F ++ + + T +LL SV
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
L KQI + + + + +ALI Y KC V+ A++IF D V +
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
+MI+GY NG + +L+MF +++ + PN T+ SIL + +LK ++H IIK
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
GF ++ +I Y KC +N + + + K++ V N++ + + + A++++
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKC 526
R + S + + S L ACA + GKAIH +K D++ ES +IDMY KC
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAV 585
G ++ A F+ + ++ WN+++ HG + LF++M K G++PD+IT+L +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
++SCCH G V E + M++ +G+ PQ EHYAC+VDL GR G L A T+ MP PP
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 646 DAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRK 705
DA +W +LL AC ++ N++L +A SKL++L P N YVL+SN +A+A W V K+R
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 770
Query: 706 EMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
MKE+ + K PGYSWI + TH F +GD +H +S IY L L
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 144/311 (46%), Gaps = 6/311 (1%)
Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
LL + +LR GKQ+ AF ++ MY CG +D +F L +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 342 SV--SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
S WNS+I+ + NG NQAL + ML F + P+ T +++A K+ K +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCH 459
+ G ++ + S LI Y + ++ ++ + +K+ V N + + YA C
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN--GYAKCG 218
Query: 460 A--EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVES 517
A ++ + + N TF VL CA+ ++ G +H L + + D + +++
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKP 577
+++ MY KCG +DA + FR + R WN M+ GY Q G E F +M GV P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 578 DEITYLAVLTS 588
D IT+ ++L S
Sbjct: 339 DAITFSSLLPS 349
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 11/241 (4%)
Query: 374 IPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKR 433
IP ++ +L+A SN L+Q QVH+ +I + D ++ Y C + ++ +
Sbjct: 34 IPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 434 VLSEID-KKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
+ +D +++++ N++ S V +AL Y + + STF ++KAC A+
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
+ + + D + FV S++I Y + G I+ + F ++ + WN M+
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
GYA+ G V F+ M + P+ +T+ VL+ C L+ LHGL
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG-------VQLHGL 264
Query: 612 I 612
+
Sbjct: 265 V 265
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 250/781 (32%), Positives = 414/781 (53%), Gaps = 27/781 (3%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTK--FADFR-RAFRFLFDTQN----RDIITYNALIS 54
I+ ++ G DP ++T+L++ + K F D+ + F +Q+ RD+ +N++I
Sbjct: 82 IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 55 GLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSL--QENEIVHGVCLKLGF 109
G +F + + F R+ G+RPDAF+ S +V G+ +E + +HG L+
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 110 SSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFV 168
+ +L + I+ Y K G + A F + D NV + M+ G+ +G + S ++++
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 169 EMRSLGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSG--VCNHLNNAIMNLY 223
++ ++L S T LGA S + G QIH VK+G + VC L +++Y
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL----LSMY 317
Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMI 280
+CG +A +F + + + W+ +AA + G A LF +R + +T+
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
N++S + GK + A +K +I +AL+++Y KCG DA +F + K
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 341 DSVSWNSMIAGYSENGFFNQALDMFCHMLEF--SLIPNGYTMASILEAVSNSKSLKQAMQ 398
D V+W S+I+G +NG F +AL +F M + SL P+ M S+ A + ++L+ +Q
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 399 VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASC 458
VH +IK+G +L+ + S LI Y KC + +V + + +N V N++ S +
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557
Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
+++L+ + + + + VL A ++ L +GK++H L+ D +++A
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNA 617
Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPD 578
+IDMY KCG + A+ F+K+ SL WN M+ GY HG +LF++M K G PD
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677
Query: 579 EITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTI 638
++T+L+++++C H+G V E + M +G+ P +EHYA +VDLLGR GLLE A I
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737
Query: 639 DQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWN 698
MPI D+ IW LLSA + N++LG+L+ KLL ++P+ STYV L NLY AG+ N
Sbjct: 738 KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKN 797
Query: 699 DVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATA 758
+ KL MKEK L K+PG SWI V T+ F++G SS EI+ L +L +MV
Sbjct: 798 EAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDED 857
Query: 759 K 759
K
Sbjct: 858 K 858
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 158/628 (25%), Positives = 289/628 (46%), Gaps = 44/628 (7%)
Query: 47 ITYNALISGLARFCQSGP---ALKLFDRLRYQGLRP---DAFTFSSLVKACGSLQE---N 97
I+ ++ SG+ Q G AL L+ + + G P FTF SL+KAC +L
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYG 79
Query: 98 EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-------RDCLDLDNVAYTAM 150
+ +HG + LG+ ++ + + Y K G + A F D + +M
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-----ASFDVKEGEQIHGFGVKV 205
+ GY F + F M G+ + FSL+ V+ +F +EG+QIHGF ++
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE-PDVVSWSERIAA-ACDGV--EAF 261
+ + L A++++Y + G +DA ++F EI + +VV W+ I G+ +
Sbjct: 200 SLDTD--SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 262 GLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMY 321
L+ + N ++ + L + G+QI K+G + +L+SMY
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 322 GKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMA 381
KCG V +A ++F ++ K WN+M+A Y+EN + ALD+F M + S++P+ +T++
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 382 SILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKK 441
+++ S VH+ + K ++ S L+T Y KC ++ V +++K
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 442 NAVHINALASVLVYASCHAEALELYRTIW--GSCREVNGSTFSIVLKACAAMTDLEQGKA 499
+ V +L S L EAL+++ + + + + V ACA + L G
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 500 IHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGC 559
+H +K ++FV S++ID+Y KCG E A + F + +++ WN+M+ Y+++
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557
Query: 560 YHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL-----IPQ 614
+LFN M G+ PD ++ +VL + + + ++ LHG IP
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-------LHGYTLRLGIPS 610
Query: 615 LEHYA-CIVDLLGRVGLLEGAKMTIDQM 641
H ++D+ + G + A+ +M
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 153/630 (24%), Positives = 296/630 (46%), Gaps = 35/630 (5%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGL--A 57
QI+ +++N D L T LI + KF A+R + +++ +++ +N +I G +
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRV 113
C+S +L L+ + ++ + +F+ + AC S EN +H +K+G +
Sbjct: 251 GICES--SLDLYMLAKNNSVKLVSTSFTGALGAC-SQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
Y+ + + Y+K G + AE F +D + AMV Y N + ++F MR
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 174 GLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
+ + F+L+ V+ + G+ +H K S + + +A++ LY +CG
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS--TSTIESALLTLYSKCGCDP 425
Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFND--FQINEYTMINLLSS 285
DA +F + E D+V+W I+ C EA +F D++ +D + + M ++ ++
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 286 VGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSW 345
G LR G Q+ K G + V +G++LI +Y KCG A +F + ++ V+W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 346 NSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK 405
NSMI+ YS N ++D+F ML + P+ ++ S+L A+S++ SL + +H + ++
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 406 SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---A 462
G D + + LI Y KC ++ + ++ K+ + N + + Y S H + A
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM--IYGYGS-HGDCITA 662
Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
L L+ + + + TF ++ AC +E+GK I +K Y + +E + ++
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF-MKQDYGIEPNMEHYANMV 721
Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVS-NLFNKMSKFGVKPD 578
D+ + G +E+A + + ++ + W ++ H H V + + ++P+
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH---HNVELGILSAEKLLRMEPE 778
Query: 579 E-ITYLAVLTSCCHAGLVREARTYLSCMSD 607
TY+ ++ AGL EA L M +
Sbjct: 779 RGSTYVQLINLYMEAGLKNEAAKLLGLMKE 808
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/779 (30%), Positives = 414/779 (53%), Gaps = 30/779 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTK-FADFRRAFRFLFDTQNRDIITYNALISGLARF 59
QI+ L+ K + +D ++S LIS + K A D + ++ +++N++IS ++
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVY 114
A ++F ++Y G RP +TF SLV SL E ++ + K G + ++
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-- 172
+ SG + +AKSG + A F + V ++ G V +++ ++F++M S
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 173 ---------LGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLY 223
L E+SL +G +K+G ++HG + G + + + N ++N+Y
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVG-IGNGLVNMY 359
Query: 224 VRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMI 280
+CG DA ++F +T+ D VSW+ I +EA +K +R +D +T+I
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 281 NLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK 340
+ LSS + + G+QI K+G VS+ NAL+++Y + G +N+ R IF +
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 341 DSVSWNSMIAGYSEN-GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
D VSWNS+I + + +A+ F + N T +S+L AVS+ + Q+
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Query: 400 HSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASC 458
H +K+ + + + LI YGKC ++ +++ S + ++++ V N++ S ++
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 459 HAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESA 518
A+AL+L + + + ++ ++ VL A A++ LE+G +H +++A + D+ V SA
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 519 VIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG-VKP 577
++DMY KCG ++ A R F + + WN+M+ GYA+HG E LF M G P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719
Query: 578 DEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMT 637
D +T++ VL++C HAGL+ E + MSD +GL P++EH++C+ D+LGR G L+ +
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779
Query: 638 IDQMPIPPDAHIWQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
I++MP+ P+ IW+++L AC +LG A L +L+P+N YVLL N+YA+ G
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839
Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
W D+ K RK+MK+ + KE GYSW+ + H F AGD SH + IYK+L +L M
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 186/734 (25%), Positives = 352/734 (47%), Gaps = 31/734 (4%)
Query: 3 YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
+S L KN D L LI+ + + D A + + R+ +++ ++SG +R +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 63 GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYLVS 117
AL + +G+ + + F S+++AC + I +HG+ KL ++ + +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 118 GFIENYAKSGEIVSAEMC-FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
I Y K V +C F D ++V++ +++ Y G+ + +F M+ G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 177 LNEFSL-----TAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
E++ TA DV+ EQI K G L+ + + + +++ + + G
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL--FVGSGLVSAFAKSGSLSY 261
Query: 232 AVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS--- 285
A K+F+++ + V+ + + G EA LF D+ + ++ + + LLSS
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPE 320
Query: 286 --VGGERILRAGKQIQAFCYKVGFME-VVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
+ E L+ G+++ G ++ +V IGN L++MY KCG + DAR +F ++ KDS
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
VSWNSMI G +NG F +A++ + M ++P +T+ S L + ++ K K Q+H
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS-CHAE 461
+K G L+ S+ + L+T Y + LNE +++ S + + + V N++ L + E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 462 ALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
A+ + + +++N TFS VL A ++++ E GK IH LALK + E+A+I
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560
Query: 522 MYCKCGTIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDE 579
Y KCG ++ ++ F ++ RD++ WN+M+ GY + + +L M + G + D
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVT-WNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619
Query: 580 ITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTID 639
Y VL++ + +C S L + + +VD+ + G L+ A +
Sbjct: 620 FMYATVLSAFASVATLERGMEVHAC-SVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 640 QMPIPPDAHIWQSLLSACTIYGNID--LGLLAGSKLLELQPDNESTYVLLSNLYASAGMW 697
MP+ +++ W S++S +G + L L KL P + T+V + + + AG+
Sbjct: 679 TMPV-RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 698 NDVGKLRKEMKEKF 711
+ K + M + +
Sbjct: 738 EEGFKHFESMSDSY 751
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/772 (30%), Positives = 398/772 (51%), Gaps = 35/772 (4%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
D + +I+ ++K D +A F RD++++N+++SG + +S ++++F +
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 74 YQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
+G+ D TF+ ++K C L++ + +HG+ +++G + V S ++ YAK V
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---G 187
+ F+ + ++V+++A++ G V N + + F EM+ + +++ +VL
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 188 ASFDVKEGEQIHGFGVKVGFLS-GVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
A +++ G Q+H +K F + G+ + A +++Y +C DA +FD + S
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGI---VRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 247 WSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
++ I G +A LF L + +E ++ + + + L G QI
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALD 363
K V + NA I MYGKC + +A +FD + +D+VSWN++IA + +NG + L
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
+F ML + P+ +T SIL+A + SL M++HS I+KSG + S+ LI Y
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 424 KCNALNESKRV-------------LSEIDKKN-------AVHINALASVLVYASCHAEAL 463
KC + E++++ + E++K + V N++ S V +A
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
L+ + + T++ VL CA + GK IH +K D+++ S ++DMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
KCG + D++ F K R WNAM+ GYA HG E LF +M +KP+ +T++
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
++L +C H GL+ + Y M +GL PQL HY+ +VD+LG+ G ++ A I +MP
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768
Query: 644 PPDAHIWQSLLSACTIY-GNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
D IW++LL CTI+ N+++ A + LL L P + S Y LLSN+YA AGMW V
Sbjct: 769 EADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSD 828
Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
LR+ M+ L KEPG SW+ + H F GD +H + +EIY+EL +Y M
Sbjct: 829 LRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 189/726 (26%), Positives = 331/726 (45%), Gaps = 89/726 (12%)
Query: 43 NRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEI 99
R ++++N ++ + + P+ F Q FS + K C G+L+ +
Sbjct: 11 TRSVVSFNRCLTEKISY-RRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQ 69
Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF-----RDCLDL------------ 142
H + GF ++++ ++ Y S + VSA M F RD +
Sbjct: 70 AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 143 --------------DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
D V++ +M+ GY+ NGE KS EVFV+M G+E + + +L
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 189 -SF--DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVV 245
SF D G QIHG V+VG + V +A++++Y + + ++++++F I E + V
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVV--AASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 246 SWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFC 302
SWS IA A FK+++ + +++ ++L S LR G Q+ A
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 303 YKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYS--ENGFFNQ 360
K F + A + MY KC + DA+ +FD + S+N+MI GYS E+GF +
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF--K 365
Query: 361 ALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLIT 420
AL +F ++ L + +++ + A + K L + +Q++ IKS LD + + I
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 421 TYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGST 480
YGKC AL E+ RV E+ +++AV NA+ + E L L+ ++ S E + T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF-RKI 539
F +LKAC + L G IH +K+ + V ++IDMY KCG IE+A++ R
Sbjct: 486 FGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 540 CRDSLAG-------------------WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
R +++G WN+++ GY + LF +M + G+ PD+
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 581 TYLAVLTSCCH---AGLVREARTYLSCMSDLHGLIP----QLEHYAC--IVDLLGRVGLL 631
TY VL +C + AGL ++ +H + Q + Y C +VD+ + G L
Sbjct: 605 TYATVLDTCANLASAGLGKQ----------IHAQVIKKELQSDVYICSTLVDMYSKCGDL 654
Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL-LAGSKLLELQPDNESTYVLLSNL 690
+++ ++ + D W +++ +G + + L +LE N T++ +
Sbjct: 655 HDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 691 YASAGM 696
A G+
Sbjct: 714 CAHMGL 719
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/569 (25%), Positives = 270/569 (47%), Gaps = 33/569 (5%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+ ++++ G D + ++ L+ + K F + R ++ ++++A+I+G +
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
ALK F ++ ++S++++C +L E + +H LK F++ + +
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
++ YAK + A++ F + +L+ +Y AM+ GY K+ +F + S GL
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
+E SL+ V A VK EG QI+G +K VC + NA +++Y +C +A +
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC--VANAAIDMYGKCQALAEAFR 438
Query: 235 MFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
+FDE+ D VSW+ IAA G E LF + + + +E+T ++L + G
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS- 497
Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--------- 342
L G +I + K G S+G +LI MY KCG + +A I + +
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 343 -----------VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK 391
VSWNS+I+GY A +F M+E + P+ +T A++L+ +N
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 392 SLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALAS 451
S Q+H+ +IK D + S L+ Y KC L++S+ + + +++ V NA+
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 452 VLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYD 510
+ EA++L+ + + N TF +L+ACA M +++G + + + D
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 511 QDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
+ S ++D+ K G ++ A R++
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREM 766
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 171/380 (45%), Gaps = 32/380 (8%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QIY L IK+ LD ++ I + K AFR + + RD +++NA+I+ +
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--GSLQENEIVHGVCLKLGFSSRVYLVSG 118
+ L LF + + PD FTF S++KAC GSL +H +K G +S +
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDN--------------------VAYTAMVCGYVWNG 158
I+ Y+K G I AE N V++ +++ GYV
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHL 215
+ + ++ +F M +G+ ++F+ VL ++ G+QIH +K S V ++
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV--YI 640
Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDF 272
+ ++++Y +CG D+ MF++ D V+W+ I A G EA LF+ + +
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYK-VGFMEVVSIGNALISMYGKCGQVNDAR 331
+ N T I++L + ++ G + + G + + ++ + GK G+V A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 332 SIFDYLIFK-DSVSWNSMIA 350
+ + F+ D V W +++
Sbjct: 761 ELIREMPFEADDVIWRTLLG 780
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/706 (32%), Positives = 382/706 (54%), Gaps = 24/706 (3%)
Query: 65 ALKLFDRLRYQGLRP-DAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFI 120
A+ D + G+RP D+ TFSSL+K+C ++ ++VH ++ L + I
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 121 ENYAKSGEIVSAEMCF---RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
Y+KSG+ AE F R D V+++AM+ Y NG + +VFVE LGL
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQKLD-A 232
N++ TAV+ A + V G GF +K G F S VC + ++++++V+ + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC--VGCSLIDMFVKGENSFENA 222
Query: 233 VKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
K+FD+++E +VV+W+ I EA F D+ + F+ +++T+ ++ S+
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKC---GQVNDARSIFDYLIFKDSVSWN 346
L GKQ+ ++ + G ++ V +L+ MY KC G V+D R +FD + +SW
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 347 SMIAGYSEN-GFFNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
++I GY +N +A+++F M+ + PN +T +S +A N + QV
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
K G + S+ + +I+ + K + + +++R + +KN V N +A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
L I V+ TF+ +L A + + +G+ IH +K + V +A+I MY
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
KCG+I+ A R F + ++ W +M+ G+A+HG V FN+M + GVKP+E+TY+A
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
+L++C H GLV E + + M + H + P++EHYAC+VDLL R GLL A I+ MP
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
D +W++ L AC ++ N +LG LA K+LEL P+ + Y+ LSN+YA AG W + ++R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
++MKE+ L KE G SWI VG H FY GD++H + +IY EL +L
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/551 (23%), Positives = 271/551 (49%), Gaps = 24/551 (4%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRA---FRFLFDTQNRDIITYNALISGLAR 58
+++ LI+ D +L +LIS ++K D +A F + RD+++++A+++
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGN 143
Query: 59 FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLG-FSSRVY 114
+ A+K+F GL P+ + ++++++AC + + + G +K G F S V
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203
Query: 115 LVSGFIENYAK-SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
+ I+ + K +A F +L+ V +T M+ + G ++ F++M
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 174 GLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRC---G 227
G E ++F+L++V A +++ G+Q+H + ++ SG+ + + +++++Y +C G
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIR----SGLVDDVECSLVDMYAKCSADG 319
Query: 228 QKLDAVKMFDEITEPDVVSWSERIAA---ACD-GVEAFGLFKDL-RFNDFQINEYTMINL 282
D K+FD + + V+SW+ I C+ EA LF ++ + N +T +
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
+ G R GKQ+ +K G S+ N++ISM+ K ++ DA+ F+ L K+
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
VS+N+ + G N F QA + + E L + +T AS+L V+N S+++ Q+HS
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
++K G + + + LI+ Y KC +++ + RV + ++ +N + ++ +
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559
Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVID 521
LE + + + N T+ +L AC+ + + +G + + + + + + ++D
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 522 MYCKCGTIEDA 532
+ C+ G + DA
Sbjct: 620 LLCRAGLLTDA 630
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 145/609 (23%), Positives = 271/609 (44%), Gaps = 76/609 (12%)
Query: 5 LLIKNGH-HLDPILSTTLISHFTKFAD-FRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
L+K GH D + +LI F K + F A++ +++T+ +I+ +
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFP 250
Query: 63 GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGF 119
A++ F + G D FT SS+ AC L+ + +H ++ G V
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSL 308
Query: 120 IENYAK---SGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLG- 174
++ YAK G + F D +++TA++ GY+ N ++ +F EM + G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
+E N F+ ++ G D + G+Q+ G K G S + + N++++++V+ + D
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN--SSVANSVISMFVKSDRMED 426
Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A + F+ ++E ++VS++ + C + +AF L ++ + ++ +T +LLS V
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
+R G+QI + K+G + NALISMY KCG ++ A +F+++ ++ +SW SM
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
I G++++GF + L+ F M+E + PN T +IL A S H ++ G
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS-----------HVGLVSEG- 594
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
+ N++ E ++ +++ H + +L A +A E T
Sbjct: 595 -------------WRHFNSMYEDHKIKPKME-----HYACMVDLLCRAGLLTDAFEFINT 636
Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI---DMYCK 525
+ + TF L AC ++ E GK LA + + D +A I ++Y
Sbjct: 637 MPFQADVLVWRTF---LGACRVHSNTELGK----LAARKILELDPNEPAAYIQLSNIYAC 689
Query: 526 CGTIEDAKRAFRKICRDSL---AGWNAMMMG-------------YAQHGCYHEVSNLFNK 569
G E++ RK+ +L G + + +G H Y E+ L +
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 570 MSKFGVKPD 578
+ + G PD
Sbjct: 750 IKRCGYVPD 758
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTK---FADFRRAFRFLFDTQNRDIITYNALISGLA 57
Q+ K G + ++ ++IS F K D +RAF L +++++YN + G
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL---SEKNLVSYNTFLDGTC 450
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVY 114
R A KL + + L AFTF+SL V GS+++ E +H +KLG S
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ + I Y+K G I +A F + + +++T+M+ G+ +G + E F +M G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 175 LELNEFSLTAVLGA 188
++ NE + A+L A
Sbjct: 571 VKPNEVTYVAILSA 584
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 53/91 (58%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+S ++K G + + LIS ++K A R +NR++I++ ++I+G A+
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
+ L+ F+++ +G++P+ T+ +++ AC
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/763 (31%), Positives = 397/763 (52%), Gaps = 23/763 (3%)
Query: 1 QIYSLLIKN--GHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
Q++S + K LD L+ L+ + K A + + +R +N +I
Sbjct: 101 QLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 59 FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
+ AL L+ +R +G+ +F +L+KAC L++ +H + +KLG+ S ++
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDL-DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
V+ + YAK+ ++ +A F + D V + +++ Y +G+ ++ E+F EM G
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 175 LELNEFS----LTAVLGASFDVKEGEQIHGFGVKVGFLSG---VCNHLNNAIMNLYVRCG 227
N ++ LTA G S+ K G++IH +K S VCN A++ +Y RCG
Sbjct: 280 PAPNSYTIVSALTACDGFSY-AKLGKEIHASVLKSSTHSSELYVCN----ALIAMYTRCG 334
Query: 228 QKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLS 284
+ A ++ ++ DVV+W+ I + EA F D+ + +E +M ++++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 285 SVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
+ G L AG ++ A+ K G+ + +GN LI MY KC F + KD +S
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
W ++IAGY++N +AL++F + + + + + SIL A S KS+ ++H HI+
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 514
Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
+ G LLD + + L+ YGKC + + RV I K+ V ++ S +EA+E
Sbjct: 515 RKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 573
Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
L+R + + + +L A A+++ L +G+ IHC L+ + + + AV+DMY
Sbjct: 574 LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYA 633
Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
CG ++ AK F +I R L + +M+ Y HGC LF+KM V PD I++LA
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693
Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
+L +C HAGL+ E R +L M + L P EHY C+VD+LGR + A + M
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753
Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
P A +W +LL+AC + ++G +A +LLEL+P N VL+SN++A G WNDV K+R
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813
Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
+MK + K PG SWI + G H F A D SH +SKEIY++L
Sbjct: 814 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 15/282 (5%)
Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKS--GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
A +LE +++ Q Q+HS I K+ F L D + L+ YGKC +L+++++V E+
Sbjct: 84 AYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL-DFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
+ A N + V A AL LY + + S+F +LKACA + D+ G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
+H L +K Y F+ +A++ MY K + A+R F A WN+++ Y+
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 558 GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC---CHAGLVREARTYLSCMSDLHGLIPQ 614
G E LF +M G P+ T ++ LT+C +A L +E S L
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA-----SVLKSSTHS 317
Query: 615 LEHYAC--IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLL 654
E Y C ++ + R G + A+ + QM D W SL+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALK--ARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
F+ VL+ C + QG+ +H K ++ D F+ ++ MY KCG+++DA++ F
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVRE 597
++ + WN M+ Y +G L+ M GV ++ A+L +C +R
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 598 ARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
S+LH L+ +L +++ +V + + L A+ D DA +W
Sbjct: 201 G-------SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253
Query: 652 SLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKF 711
S+LS+ + G L L + + + ++Y ++S L A
Sbjct: 254 SILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTAC------------------ 294
Query: 712 LCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY 751
G+S+ +G H S+HS + LI +Y
Sbjct: 295 ----DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/779 (29%), Positives = 407/779 (52%), Gaps = 31/779 (3%)
Query: 4 SLLIKNGHHLDP-ILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
S L+ H P +L T S A +F +Q+R + L+ R
Sbjct: 19 SQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLL 78
Query: 63 GPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFS-SRVYLVSG 118
A+ + + G++PD + F +L+KA LQ+ E+ +H K G+ V + +
Sbjct: 79 REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
+ Y K G+ + F + + V++ +++ +++ + E F M +E +
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 179 EFSLTAVLGASFDVKE------GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
F+L +V+ A ++ G+Q+H +G++ G L+ + + N ++ +Y + G+ +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN---SFIINTLVAMYGKLGKLASS 255
Query: 233 VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
+ D+V+W+ +++ C +EA +++ + +E+T+ ++L +
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 290 RILRAGKQIQAFCYKVGFMEVVS-IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
+LR GK++ A+ K G ++ S +G+AL+ MY C QV R +FD + + WN+M
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 349 IAGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
IAGYS+N +AL +F M E + L+ N TMA ++ A S + + +H ++K G
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 435
Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
D + + L+ Y + ++ + R+ +++ ++ V N + + V++ H +AL L
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 468 TIWGSCREV-----------NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
+ R+V N T +L +CAA++ L +GK IH A+K D+ V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
SA++DMY KCG ++ +++ F +I + ++ WN ++M Y HG E +L M GVK
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
P+E+T+++V +C H+G+V E M +G+ P +HYAC+VDLLGR G ++ A
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 637 TIDQMPIP-PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAG 695
++ MP A W SLL A I+ N+++G +A L++L+P+ S YVLL+N+Y+SAG
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 696 MWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
+W+ ++R+ MKE+ + KEPG SWI G H F AGDSSH QS+++ L L+E M
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/580 (24%), Positives = 272/580 (46%), Gaps = 32/580 (5%)
Query: 1 QIYSLLIKNGHHLDPI-LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
QI++ + K G+ +D + ++ TL++ + K DF ++ R+ +++N+LIS L F
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENE------IVHGVCLKLGFSSRV 113
+ AL+ F + + + P +FT S+V AC +L E VH L+ G
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNS 236
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
++++ + Y K G++ S+++ D V + ++ N + ++ E EM
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 174 GLELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
G+E +EF++++VL A ++ G+++H + +K G L + + +A++++Y C Q L
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYCNCKQVL 355
Query: 231 DAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFN-DFQINEYTMINLLSSV 286
++FD + + + W+ IA EA LF + + N TM ++ +
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
+ I F K G + N L+ MY + G+++ A IF + +D V+WN
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 347 SMIAGYSENGFFNQALDMFCHMLEF-----------SLIPNGYTMASILEAVSNSKSLKQ 395
+MI GY + AL + M SL PN T+ +IL + + +L +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 396 AMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVY 455
++H++ IK+ D ++ S L+ Y KC L S++V +I +KN + N +
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 456 ASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFV 515
EA++L R + + N TF V AC+ +++G I + +K Y +
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYV-MKPDYGVEPSS 654
Query: 516 E--SAVIDMYCKCGTIEDAKRAFRKICRD--SLAGWNAMM 551
+ + V+D+ + G I++A + + RD W++++
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/729 (30%), Positives = 395/729 (54%), Gaps = 24/729 (3%)
Query: 7 IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
IK G+ ++ + LI F+K F A++ D+ + ++ +N +I+G R G
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 67 KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENY 123
LF + +PD++T+SS++ AC SL++ ++V +K G + V++ + ++ Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLY 295
Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
AK G + A F + V++T M+ GY + + + E+F EMR G+E+N ++T
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 184 AVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF---D 237
+V+ G V E Q+H + K GF + + + A++++Y + G + ++F D
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFY--LDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 238 EITEPDVV-----SWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
+I ++V S+S+ +A LF + + +E+++ +LLS + L
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPG----KAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CL 466
Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
GKQ+ + K G + +++G++L ++Y KCG + ++ +F + FKD+ W SMI+G+
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
+E G+ +A+ +F ML+ P+ T+A++L S+ SL + ++H + +++G
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM 586
Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
+ S L+ Y KC +L +++V + + + V ++L S + L+R + S
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
++ S +LKA A + G +H K + V S+++ MY K G+I+D
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
+AF +I L W A++ YAQHG +E ++N M + G KPD++T++ VL++C H
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
GLV E+ +L+ M +G+ P+ HY C+VD LGR G L A+ I+ M I PDA +W +
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
LL+AC I+G ++LG +A K +EL+P + Y+ LSN+ A G W++V + RK MK +
Sbjct: 827 LLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Query: 713 CKEPGYSWI 721
KEPG+S +
Sbjct: 887 QKEPGWSSV 895
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 183/712 (25%), Positives = 345/712 (48%), Gaps = 60/712 (8%)
Query: 13 LDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFDR 71
D L+ +L+S ++ A + LFDT D+++ N +ISG + +L+ F +
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAK-LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSK 140
Query: 72 LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVC---LKLGFSSRVYLVSGFIENYAKSGE 128
+ + G + ++ S++ AC +LQ VC +K+G+ + S I+ ++K+
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
A FRD L + + ++ G + N + ++F EM + + ++ ++VL A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 189 SFDVKE---GEQIHGFGVKVGFLSG-VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDV 244
+++ G+ + +K G VC AI++LY +CG +A+++F I P V
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAEDVFVC----TAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 245 VSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAF 301
VSW+ ++ + D A +FK++R + +IN T+ +++S+ G ++ Q+ A+
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 302 CYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL--IFKDSVSWNSMIAGYSENGFFN 359
+K GF S+ ALISMY K G ++ + +F+ L I + ++ N MI +S++
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPG 435
Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
+A+ +F ML+ L + +++ S+L + L QVH + +KSG +LD ++ S L
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 420 TTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNG 478
T Y KC +L ES ++ I K NA + ++ Y EA+ L+ + +
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR-EAIGLFSEMLDDGTSPDE 551
Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
ST + VL C++ L +GK IH L+A D+ + + SA+++MY KCG+++ A++ + +
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR 611
Query: 539 ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREA 598
+ ++++ GY+QHG + LF M G D ++L +
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA---------- 661
Query: 599 RTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACT 658
+ +SD L Q+ Y + ++GL + + SLL+ +
Sbjct: 662 ----AALSDESSLGAQVHAY------ITKIGLCT-------------EPSVGSSLLTMYS 698
Query: 659 IYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEK 710
+G+ID A S++ PD + L+++ YA G N+ ++ MKEK
Sbjct: 699 KFGSIDDCCKAFSQI--NGPDLIAWTALIAS-YAQHGKANEALQVYNLMKEK 747
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 242/475 (50%), Gaps = 24/475 (5%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLA 57
Q+++ + K+G +LD ++ LIS ++K D + F L D Q ++I+ N +I+ +
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429
Query: 58 RFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVS 117
+ + G A++LF R+ +GLR D F+ SL+ L + VHG LK G + + S
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGS 489
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
Y+K G + + F+ DN + +M+ G+ G ++ +F EM G
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 178 NEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
+E +L AVL + + G++IHG+ ++ G G+ L +A++N+Y +CG A +
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM--DLGSALVNMYSKCGSLKLARQ 607
Query: 235 MFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
++D + E D VS S I+ + G+ + F LF+D+ + F ++ + + ++L +
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
G Q+ A+ K+G S+G++L++MY K G ++D F + D ++W ++IA
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA-MQVHSHIIKSGFLL 410
Y+++G N+AL ++ M E P+ T +L A S+ ++++ ++S + G
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEP 787
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI--NALASVLVYASC--HAE 461
++ C++ G+ L E++ + N +HI +AL + A+C H E
Sbjct: 788 ENRHYVCMVDALGRSGRLREAESFI------NNMHIKPDALVWGTLLAACKIHGE 836
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 2/308 (0%)
Query: 292 LRAGKQIQAFCYKVGFMEV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
LR K +QA + + V + +L+S Y G + DA +FD + D VS N MI+
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
GY ++ F ++L F M N + S++ A S ++ + V H IK G+
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
+ + S LI + K ++ +V + N N + + + + +L+ +
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
++ + T+S VL ACA++ L GK + +K +D+FV +A++D+Y KCG +
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMA 302
Query: 531 DAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
+A F +I S+ W M+ GY + +F +M GV+ + T +V+++C
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 591 HAGLVREA 598
+V EA
Sbjct: 363 RPSMVCEA 370
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/712 (32%), Positives = 369/712 (51%), Gaps = 32/712 (4%)
Query: 59 FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYL 115
F Q + K+ RLR T+ SL+ AC S L + +H L L
Sbjct: 56 FAQKNSSFKI--RLR---------TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTIL 104
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
+ + Y K G + A F + + V+YT+++ GY NG+ ++ ++++M L
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 176 ELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHL--NNAIMNLYVRCGQKL 230
++F+ +++ A S DV G+Q+H +K+ S HL NA++ +YVR Q
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSS----HLIAQNALIAMYVRFNQMS 220
Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKD-LRFNDFQINEYTMINLLSSV 286
DA ++F I D++SWS IA EA K+ L F F NEY + L +
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 287 GGERILRA--GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS 344
+LR G QI C K G +L MY +CG +N AR +FD + D+ S
Sbjct: 281 SS--LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 345 WNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHII 404
WN +IAG + NG+ ++A+ +F M IP+ ++ S+L A + +L Q MQ+HS+II
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEI-DKKNAVHINALASVLVYASCHAEAL 463
K GFL D ++ + L+T Y C+ L + + + ++V N + + + E L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
L++ + S E + T +L+ C ++ L+ G +HC +LK + F+++ +IDMY
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 524 CKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYL 583
KCG++ A+R F + + W+ +++GYAQ G E LF +M G++P+ +T++
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 584 AVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPI 643
VLT+C H GLV E + M HG+ P EH +C+VDLL R G L A+ ID+M +
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 644 PPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKL 703
PD +W++LLSAC GN+ L A +L++ P N + +VLL +++AS+G W + L
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALL 698
Query: 704 RKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMV 755
R MK+ + K PG SWI + H F+A D H + +IY L ++ M+
Sbjct: 699 RSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQML 750
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 152/582 (26%), Positives = 282/582 (48%), Gaps = 31/582 (5%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARF 59
+I+ ++ + D IL+ ++S + K R A R +FD R++++Y ++I+G ++
Sbjct: 88 KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDA-REVFDFMPERNLVSYTSVITGYSQN 146
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLV 116
Q A++L+ ++ + L PD F F S++KAC S + + +H +KL SS +
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG-EFDKSKEVFVEMRSLGL 175
+ I Y + ++ A F D +++++++ G+ G EF+ + EM S G+
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL-KEMLSFGV 265
Query: 176 -ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIM-----NLYVRC 226
NE+ + L A + G QIHG +K L+G NAI ++Y RC
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-SELAG------NAIAGCSLCDMYARC 318
Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLL 283
G A ++FD+I PD SW+ IA + EA +F +R + F + ++ +LL
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF-DYLIFKDS 342
+ L G QI ++ K GF+ +++ N+L++MY C + ++F D+ DS
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
VSWN+++ ++ + L +F ML P+ TM ++L SLK QVH +
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
+K+G + + + LI Y KC +L +++R+ +D ++ V + L + EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVI 520
L L++ + + E N TF VL AC+ + +E+G ++ ++ + E S V+
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEHGISPTKEHCSCVV 617
Query: 521 DMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYH 561
D+ + G + +A+R ++ + W ++ G H
Sbjct: 618 DLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 332/629 (52%), Gaps = 74/629 (11%)
Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD- 256
+H +K GF + + + N +++ Y +CG D ++FD++ + ++ +W+ +
Sbjct: 42 VHASVIKSGFSNEI--FIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 257 GV--EAFGLFKDLRFND-------------------------------FQINEYTMINLL 283
G EA LF+ + D F +NEY+ ++L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
S+ G + G Q+ + K F+ V IG+AL+ MY KCG VNDA+ +FD + ++ V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
SWNS+I + +NG +ALD+F MLE + P+ T+AS++ A ++ ++K +VH +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 404 IKSGFLLDDSMIS-CLITTYGKCNALNESKRVL--------------------------- 435
+K+ L +D ++S + Y KC+ + E++ +
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 436 ----SEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
+++ ++N V NAL + + EAL L+ + +F+ +LKACA +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 492 TDLEQGKAIHCLALKARY------DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
+L G H LK + + DIFV +++IDMY KCG +E+ FRK+
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
WNAM++G+AQ+G +E LF +M + G KPD IT + VL++C HAG V E R Y S M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
+ G+ P +HY C+VDLLGR G LE AK I++MP+ PD+ IW SLL+AC ++ NI L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
G KLLE++P N YVLLSN+YA G W DV +RK M+++ + K+PG SWI + G
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQG 639
Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
+ H F D SH + K+I+ L L M
Sbjct: 640 HDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/569 (25%), Positives = 255/569 (44%), Gaps = 103/569 (18%)
Query: 52 LISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSS 111
L + L+ F S P KL D S +K+ S VH +K GFS+
Sbjct: 9 LAADLSSFTDSSPFAKLLD---------------SCIKSKLSAIYVRYVHASVIKSGFSN 53
Query: 112 RVYLVSGFIENYAKSGEIV-------------------------------SAEMCFRDCL 140
+++ + I+ Y+K G + A+ FR
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 141 DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQ 197
+ D + +MV G+ + +++ F M G LNE+S +VL A D+ +G Q
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA---AA 254
+H K FLS V ++ +A++++Y +CG DA ++FDE+ + +VVSW+ I
Sbjct: 174 VHSLIAKSPFLSDV--YIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 255 CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV-VSI 313
VEA +F+ + + + +E T+ +++S+ ++ G+++ K + + +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 314 GNALISMYGKCGQVNDARSIFD--------------------------YLIF-----KDS 342
NA + MY KC ++ +AR IFD L+F ++
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
VSWN++IAGY++NG +AL +FC + S+ P Y+ A+IL+A ++ L MQ H H
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 403 IIKSGFLL-----DDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYA 456
++K GF DD + + LI Y KC + E V ++ +++ V NA+
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 457 SCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE 516
EALEL+R + S + + T VL AC +E+G+ H + R D V
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSSMTR---DFGVA 526
Query: 517 ------SAVIDMYCKCGTIEDAKRAFRKI 539
+ ++D+ + G +E+AK ++
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 218/467 (46%), Gaps = 48/467 (10%)
Query: 19 TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
++++ TK A RD T+N+++SG A+ + AL F + +G
Sbjct: 90 NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV 149
Query: 79 PDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
+ ++F+S++ AC L + VH + K F S VY+ S ++ Y+K G + A+
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---V 192
F + D + V++ +++ + NG ++ +VF M +E +E +L +V+ A +
Sbjct: 210 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269
Query: 193 KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD--------------- 237
K G+++HG VK L L+NA +++Y +C + +A +FD
Sbjct: 270 KVGQEVHGRVVKNDKLRNDI-ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 238 ----------------EITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYT 278
++ E +VVSW+ IA + EA LF L+ Y+
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 279 MINLLSSVGGERILRAGKQIQAFCYKVGFM------EVVSIGNALISMYGKCGQVNDARS 332
N+L + L G Q K GF + + +GN+LI MY KCG V +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
+F ++ +D VSWN+MI G+++NG+ N+AL++F MLE P+ TM +L A ++
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 393 LKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
+++ S + + G +C++ G+ L E+K ++ E+
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 166/357 (46%), Gaps = 63/357 (17%)
Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
+ + A K GF + I N LI Y KCG + D R +FD + ++ +WNS++ G ++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 356 GFFNQALDMFCHMLE-------------------------FSL------IPNGYTMASIL 384
GF ++A +F M E F++ + N Y+ AS+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAV 444
A S + + +QVHS I KS FL D + S L+ Y KC +N+++RV E+ +N V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
N+L + EAL++++ + S E + T + V+ ACA+++ ++ G+ +H
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 505 LKA-RYDQDIFVESAVIDMYCKCGTIED-------------------------------A 532
+K + DI + +A +DMY KC I++ A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
+ F K+ ++ WNA++ GY Q+G E +LF + + V P ++ +L +C
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 188/402 (46%), Gaps = 55/402 (13%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++SL+ K+ D + + L+ ++K + A R + +R+++++N+LI+ F
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC---FE 229
Query: 61 QSGP---ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLG-FSSRV 113
Q+GP AL +F + + PD T +S++ AC SL ++ VHG +K + +
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDN----------------------------- 144
L + F++ YAK I A F D + + N
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIF-DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 145 ---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQI 198
V++ A++ GY NGE +++ +F ++ + +S +L A D+ E G Q
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 199 HGFGVKVG--FLSGVCNHL--NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI--- 251
H +K G F SG + + N+++++YV+CG + +F ++ E D VSW+ I
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 252 AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEV 310
A G EA LF+++ + + + TMI +LS+ G + G+ + G +
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMIAG 351
++ + G+ G + +A+S+ + + + DSV W S++A
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 237/748 (31%), Positives = 392/748 (52%), Gaps = 25/748 (3%)
Query: 27 KFADFRRA-FRFLFDTQNRDIITYNALISG----LARFCQSGPALKLFDRLRYQG-LRPD 80
K+ F RA R + D + I T++ ++ L RFC+SG L G D
Sbjct: 35 KYVIFNRASLRTVSDCVD-SITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDID 93
Query: 81 AFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFR 137
T S+++ C SL++ + V GF L S Y G++ A F
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 138 DCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD----VK 193
+ + + ++ +G+F S +F +M S G+E++ ++ + V SF V
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV-SKSFSSLRSVH 212
Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEPDVVSWSERIA 252
GEQ+HGF +K GF G N + N+++ Y++ Q++D A K+FDE+TE DV+SW+ I
Sbjct: 213 GGEQLHGFILKSGF--GERNSVGNSLVAFYLK-NQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 253 A-ACDGVEAFGL--FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
+G+ GL F + + +I+ T++++ + R++ G+ + + K F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
N L+ MY KCG ++ A+++F + + VS+ SMIAGY+ G +A+ +F M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
E + P+ YT+ ++L + + L + +VH I ++ D + + L+ Y KC ++
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHA-EALELYRTIWGSCR-EVNGSTFSIVLKA 487
E++ V SE+ K+ + N + +C+A EAL L+ + R + T + VL A
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGY-SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
CA+++ ++G+ IH ++ Y D V ++++DMY KCG + A F I L W
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
M+ GY HG E LFN+M + G++ DEI+++++L +C H+GLV E + + M
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
+ P +EHYACIVD+L R G L A I+ MPIPPDA IW +LL C I+ ++ L
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
K+ EL+P+N YVL++N+YA A W V +LRK + ++ L K PG SWI + G
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 728 HHFYAGDSSHSQSKEIYKELIKLYEHMV 755
+ F AGDSS+ +++ I L K+ M+
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVRARMI 776
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 200/400 (50%), Gaps = 12/400 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ ++K+G + +L++ + K A + + RD+I++N++I+G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
+ L +F ++ G+ D T S+ C + VH + +K FS +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
++ Y+K G++ SA+ FR+ D V+YT+M+ GY G ++ ++F EM G+
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
+ +++TAVL + EG+++H + +K L G ++NA+M++Y +CG +A
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDL-GFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 235 MFDEITEPDVVSWSERI---AAACDGVEAFGLFK-DLRFNDFQINEYTMINLLSSVGGER 290
+F E+ D++SW+ I + C EA LF L F +E T+ +L +
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
G++I + + G+ + N+L+ MY KCG + A +FD + KD VSW MIA
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNS 390
GY +GF +A+ +F M + + + + S+L A S+S
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 179/368 (48%), Gaps = 26/368 (7%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
++S+ +K + TL+ ++K D A + +R +++Y ++I+G AR
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 62 SGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVSG 118
+G A+KLF+ + +G+ PD +T ++++ C L E + VH + +++ +
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
++ YAK G + AE+ F + D +++ ++ GY N +++ +F +L LE
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF----NLLLEEK 493
Query: 179 EFS-----LTAVLGA-----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
FS + VL A +FD +G +IHG+ ++ G+ S H+ N+++++Y +CG
Sbjct: 494 RFSPDERTVACVLPACASLSAFD--KGREIHGYIMRNGYFSD--RHVANSLVDMYAKCGA 549
Query: 229 KLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSS 285
L A +FD+I D+VSW+ IA G EA LF +R + +E + ++LL +
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 286 VGGERILRAG-KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSV 343
++ G + ++ V ++ M + G + A R I + I D+
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 344 SWNSMIAG 351
W +++ G
Sbjct: 670 IWGALLCG 677
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
+++ + +N D +S L+ + K + A + + +DII++N +I G ++ C
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 61 QSGPALKLFD-RLRYQGLRPDAFTFSSLVKACGSL---QENEIVHGVCLKLGFSSRVYLV 116
+ AL LF+ L + PD T + ++ AC SL + +HG ++ G+ S ++
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
+ ++ YAK G ++ A M F D D V++T M+ GY +G ++ +F +MR G+E
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
+E S ++L A S V EG + + H I+++ R G + A
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY-ACIVDMLARTGDLIKAY 656
Query: 234 KMFDEIT-EPDVVSW 247
+ + + PD W
Sbjct: 657 RFIENMPIPPDATIW 671
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 362 bits (929), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 319/561 (56%), Gaps = 9/561 (1%)
Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
+G Q+H + +K G SG+ +N ++++Y +C + L A K+FD + E +VVSWS ++
Sbjct: 24 QGGQVHCYLLKSG--SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSG 81
Query: 254 AC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
D + LF ++ NE+T L + G L G QI FC K+GF +
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
V +GN+L+ MY KCG++N+A +F ++ + +SWN+MIAG+ G+ ++ALD F M E
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 371 FSLI--PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS--MISCLITTYGKCN 426
++ P+ +T+ S+L+A S++ + Q+H +++SGF S + L+ Y KC
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
L +++ +I +K + ++L EA+ L++ + +++ S ++
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 487 ACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG 546
A L QGK + LA+K + V ++V+DMY KCG +++A++ F ++ +
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381
Query: 547 WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS 606
W ++ GY +HG + +F +M + ++PDE+ YLAVL++C H+G+++E S +
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441
Query: 607 DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLG 666
+ HG+ P++EHYAC+VDLLGR G L+ AK ID MPI P+ IWQ+LLS C ++G+I+LG
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELG 501
Query: 667 LLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGY 726
G LL + N + YV++SNLY AG WN+ G R+ K L KE G SW+ +
Sbjct: 502 KEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIERE 561
Query: 727 THHFYAGDSSHSQSKEIYKEL 747
H F +G+ SH + I + L
Sbjct: 562 VHFFRSGEDSHPLTPVIQETL 582
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 250/458 (54%), Gaps = 12/458 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ L+K+G L+ I S LI + K + A++ R++++++AL+SG
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
+L LF + QG+ P+ FTFS+ +KACG +L++ +HG CLK+GF V + +
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE- 176
++ Y+K G I AE FR +D +++ AM+ G+V G K+ + F M+ ++
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 177 -LNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
+EF+LT++L A + G+QIHGF V+ GF + ++++LYV+CG A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 233 VKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
K FD+I E ++SWS I A + VEA GLFK L+ + QI+ + + +++
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
+LR GKQ+QA K+ S+ N+++ MY KCG V++A F + KD +SW +I
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GF 408
GY ++G +++ +F ML ++ P+ ++L A S+S +K+ ++ S ++++ G
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
+C++ G+ L E+K ++ + K V I
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 21/294 (7%)
Query: 373 LIPNG-YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNES 431
+IPN + SIL + Q QVH +++KSG L+ + LI Y KC +
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 432 KRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAM 491
+V + ++N V +AL S V +L L+ + N TFS LKAC +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
LE+G IH LK ++ + V ++++DMY KCG I +A++ FR+I SL WNAM+
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVK--PDEITYLAVLTSCCHAGLVREARTYLSCMSDLH 609
G+ G + + F M + +K PDE T ++L +C G++ + +H
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK-------QIH 233
Query: 610 GLIPQLEHY--------ACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLL 654
G + + + +VDL + G L A+ DQ I I W SL+
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ--IKEKTMISWSSLI 285
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 232/763 (30%), Positives = 386/763 (50%), Gaps = 22/763 (2%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
++ +I G LD LS LI+ +++ A + R++++++ ++S
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 62 SGPALKLF-DRLRYQGLRPDAFTFSSLVKACGSLQENE-----IVHGVCLKLGFSSRVYL 115
+L +F + R + P+ + SS ++AC L + +K GF VY+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
+ I+ Y K G I A + F + V +T M+ G V G S ++F ++ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 176 ELNEFSLTAVLGA----SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
+ + L+ VL A F ++ G+QIH ++ G L N +++ YV+CG+ +
Sbjct: 246 VPDGYILSTVLSACSILPF-LEGGKQIHAHILRYGLEMDAS--LMNVLIDSYVKCGRVIA 302
Query: 232 AVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A K+F+ + +++SW+ ++ EA LF + + + Y ++L+S
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
L G Q+ A+ K + N+LI MY KC + DAR +FD D V +N+M
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 349 IAGYSENGF---FNQALDMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHII 404
I GYS G ++AL++F M F LI P+ T S+L A ++ SL + Q+H +
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 405 KSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALE 464
K G LD S LI Y C L +S+ V E+ K+ V N++ + V S + EAL
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541
Query: 465 LYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
L+ + S + TF+ ++ A + ++ G+ HC LK + + ++ +A++DMY
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYA 601
Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
KCG+ EDA +AF + WN+++ YA HG + + KM G++P+ IT++
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVG 661
Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
VL++C HAGLV + M G+ P+ EHY C+V LLGR G L A+ I++MP
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK 720
Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
P A +W+SLLS C GN++L A + P + ++ +LSN+YAS GMW + K+R
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780
Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
+ MK + + KEPG SWI + H F + D SH ++ +IY+ L
Sbjct: 781 ERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVL 823
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 179/676 (26%), Positives = 307/676 (45%), Gaps = 58/676 (8%)
Query: 94 LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
L +VHG + G YL + I Y+++G +V A F + + V+++ MV
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 154 YVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFDVKEGE------QIHGFGVKVG 206
+G +++S VF+E R+ NE+ L++ + A + +G Q+ F VK G
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGRGRWMVFQLQSFLVKSG 178
Query: 207 FLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVEAF---GL 263
F V ++ +++ Y++ G A +FD + E V+W+ I+ ++ L
Sbjct: 179 FDRDV--YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 264 FKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGK 323
F L ++ + Y + +LS+ L GKQI A + G S+ N LI Y K
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 324 CGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASI 383
CG+V A +F+ + K+ +SW ++++GY +N +A+++F M +F L P+ Y +SI
Sbjct: 297 CGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
L + ++ +L QVH++ IK+ D + + LI Y KC+ L ++++V +
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 444 VHINALA---SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
V NA+ S L EAL ++R + + TF +L+A A++T L K I
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
H L K + DIF SA+ID+Y C ++D++ F ++ L WN+M GY Q
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536
Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
E NLF ++ +PDE T+ ++T+ + V+ + + C GL
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF-HCQLLKRGLECNPYITNA 595
Query: 621 IVDLLGRVGLLEGAKMTID---------------------------QM-------PIPPD 646
++D+ + G E A D QM I P+
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655
Query: 647 AHIWQSLLSACTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYASAGMWNDVGKLR 704
+ +LSAC+ G ++ GL +L ++P+ E YV + +L AG N
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH-YVCMVSLLGRAGRLNKA---- 710
Query: 705 KEMKEKFLCKEPGYSW 720
+E+ EK K W
Sbjct: 711 RELIEKMPTKPAAIVW 726
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 216/455 (47%), Gaps = 14/455 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI++ +++ G +D L LI + K A + N++II++ L+SG +
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVS 117
A++LF + GL+PD + SS++ +C SL VH +K + Y+ +
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNG---EFDKSKEVFVEMRSLG 174
I+ YAK + A F D V + AM+ GY G E ++ +F +MR
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 175 LELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
+ + + ++L AS + +QIHG K G + +A++++Y C D
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI--FAGSALIDVYSNCYCLKD 507
Query: 232 AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
+ +FDE+ D+V W+ A + EA LF +L+ + + +E+T N++++ G
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
++ G++ K G I NAL+ MY KCG DA FD +D V WNS+
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
I+ Y+ +G +AL M M+ + PN T +L A S++ ++ ++ +++ G
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI 687
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
+ C+++ G+ LN+++ ++ ++ K A
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPA 722
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 481 FSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
F+ +L+ A+ L +H + + D ++ + +I++Y + G + A++ F K+
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 541 RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGV-KPDEITYLAVLTSCCHAGLVREAR 599
+L W+ M+ HG Y E +F + + P+E + + +C +GL R
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR 164
Query: 600 TYLSCMSDL---HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
+ + G + ++D + G ++ A++ D +P W +++S
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223
Query: 657 CTIYGNIDLGLLAGSKLLE--LQPDNESTYVLLSNLYA 692
C G + L +L+E + PD Y+L + L A
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDG---YILSTVLSA 258
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 316/607 (52%), Gaps = 69/607 (11%)
Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
N +++ Y + G + FD++ + D VSW+ I + + A + D+ +
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
++T+ N+L+SV R + GK++ +F K+G VS+ N+L++MY KCG A+ +
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 334 FDYLIFKDS-------------------------------VSWNSMIAGYSENGFFNQAL 362
FD ++ +D V+WNSMI+G+++ G+ +AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 363 DMFCHMLEFSLI-PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITT 421
D+F ML SL+ P+ +T+AS+L A +N + L Q+HSHI+ +GF + +++ LI+
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 422 YGKCNA---------------------------------LNESKRVLSEIDKKNAVHINA 448
Y +C +N++K + + ++ V A
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
+ + EA+ L+R++ G + N T + +L +++ L GK IH A+K+
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
+ V +A+I MY K G I A RAF I C W +M++ AQHG E LF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
M G++PD ITY+ V ++C HAGLV + R Y M D+ +IP L HYAC+VDL GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
GLL+ A+ I++MPI PD W SLLSAC ++ NIDLG +A +LL L+P+N Y L
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623
Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
+NLY++ G W + K+RK MK+ + KE G+SWI V H F D +H + EIY +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Query: 748 IKLYEHM 754
K+++ +
Sbjct: 684 KKIWDEI 690
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 145/591 (24%), Positives = 252/591 (42%), Gaps = 122/591 (20%)
Query: 79 PDAFTFSSLVKACGSLQEN-----------EIVHGVCLKLGFSSRVYLVSGFIENYAKSG 127
P + S+L++ C +L + ++VH +K G VYL++ + Y+K+G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 128 EIVSA-----EMCFRDCLDL--------------------------DNVAYTAMVCGYVW 156
+ A EM R D+V++T M+ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 157 NGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCN 213
G++ K+ V +M G+E +F+LT VL A+ ++ G+++H F VK+G V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS- 182
Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA------------------AAC 255
++N+++N+Y +CG + A +FD + D+ SW+ IA A
Sbjct: 183 -VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 256 DGV----------------EAFGLF-KDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
D V A +F K LR + + +T+ ++LS+ L GKQI
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQV------------------------------- 327
+ GF + NALISMY +CG V
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 328 --NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
N A++IF L +D V+W +MI GY ++G + +A+++F M+ PN YT+A++L
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID-KKNAV 444
S+ SL Q+H +KSG + S+ + LIT Y K + + R I +++ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 445 HINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA 504
++ L EALEL+ T+ + T+ V AC + QG+
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR--QYFD 539
Query: 505 LKARYDQDIFVES---AVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMM 551
+ D+ I S ++D++ + G +++A+ K+ + W +++
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 155/661 (23%), Positives = 277/661 (41%), Gaps = 130/661 (19%)
Query: 20 TLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRP 79
T++S ++K D F RD +++ +I G Q A+++ + +G+ P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 80 DAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
FT +++ V A ++ + VH +KLG V + + + YAK G+ + A+ F
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 137 -----RDC---------------LDL-----------DNVAYTAMVCGYVWNGEFDKSKE 165
RD +DL D V + +M+ G+ G ++ +
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 166 VFVEM-RSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF-LSGVCNHLNNAIM 220
+F +M R L + F+L +VL A ++++ G+QIH V GF +SG+ + NA++
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI---VLNALI 321
Query: 221 NLYVRCG-----QKL----------------------------DAVKMFDEITEPDVVSW 247
++Y RCG ++L A +F + + DVV+W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 248 SERIAA----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCY 303
+ I G EA LF+ + + N YT+ +LS L GKQI
Sbjct: 382 TAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 304 KVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAGYSENGFFNQAL 362
K G + VS+ NALI+MY K G + A FD + +D+VSW SMI +++G +AL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 363 DMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD-SMISCLITT 421
++F ML L P+ T + A +++ + Q Q + ++ S +C++
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 422 YGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTF 481
+G+ L E++ + ++ +E WGS
Sbjct: 561 FGRAGLLQEAQEFIEKM-----------------------PIEPDVVTWGS--------- 588
Query: 482 SIVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC 540
+L AC +++ GK A L L + + SA+ ++Y CG E+A + RK
Sbjct: 589 --LLSACRVHKNIDLGKVAAERLLLLEPENSGAY--SALANLYSACGKWEEAAK-IRKSM 643
Query: 541 RDSLA----GWNAMMMGYAQH------GCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCC 590
+D G++ + + + H G + E + ++ M K + ++ Y+ S
Sbjct: 644 KDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703
Query: 591 H 591
H
Sbjct: 704 H 704
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 11/244 (4%)
Query: 19 TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
T L+ + K D +A ++RD++ + A+I G + G A+ LF + G R
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 79 PDAFTFSSL---VKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
P+++T +++ + SL + +HG +K G V + + I YAK+G I SA
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 136 FRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD-- 191
F D + + D V++T+M+ +G +++ E+F M GL + + V A
Sbjct: 471 F-DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 192 -VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT-EPDVVSWSE 249
V +G Q V + +H +++L+ R G +A + +++ EPDVV+W
Sbjct: 530 LVNQGRQYFDMMKDVDKIIPTLSHY-ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 250 RIAA 253
++A
Sbjct: 589 LLSA 592
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 87/208 (41%), Gaps = 10/208 (4%)
Query: 473 CREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ----DIFVESAVIDMYCKCG 527
CR + +G FS+ L + G A+H L +D+ F + V+ Y K G
Sbjct: 38 CRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKL---FDEMPLRTAFSWNTVLSAYSKRG 94
Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
++ F ++ + W M++GY G YH+ + M K G++P + T VL
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154
Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
S + + S + L GL + ++++ + G AK D+M + D
Sbjct: 155 SVAATRCMETGKKVHSFIVKL-GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM-VVRDI 212
Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLE 675
W ++++ G +DL + ++ E
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAE 240
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 212/673 (31%), Positives = 362/673 (53%), Gaps = 15/673 (2%)
Query: 94 LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
Q+ + H +K G S +Y+ + +++Y K G + A M F + D+V++ M+ G
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSG 210
Y G+ + + +F M+ G +++ +S + +L VK GEQ+HG +K G+
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY--- 132
Query: 211 VCN-HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKD 266
CN ++ ++++++Y +C + DA + F EI+EP+ VSW+ IA D AF L
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192
Query: 267 LRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
+ ++ T LL+ + KQ+ A K+G ++I NA+IS Y CG
Sbjct: 193 MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 326 QVNDARSIFDYLI-FKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL 384
V+DA+ +FD L KD +SWNSMIAG+S++ A ++F M + + YT +L
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 385 EAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGK--CNALNESKRVLSEIDKKN 442
A S + +H +IK G S + LI+ Y + + ++ + + K+
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 443 AVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHC 502
+ N++ + +A++ + + S +V+ FS +L++C+ + L+ G+ IH
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Query: 503 LALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMGYAQHGCYH 561
LA K+ + + FV S++I MY KCG IE A++ F++I + S WNAM++GYAQHG
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 562 EVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACI 621
+LF++M VK D +T+ A+LT+C H GL++E L+ M ++ + P++EHYA
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 622 VDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNE 681
VDLLGR GL+ AK I+ MP+ PD + ++ L C G I++ + LLE++P++
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612
Query: 682 STYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSK 741
TYV LS++Y+ W + ++K MKE+ + K PG+SWI + F A D S+ +
Sbjct: 613 FTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQ 672
Query: 742 EIYKELIKLYEHM 754
+IY + L + M
Sbjct: 673 DIYMMIKDLTQEM 685
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 273/549 (49%), Gaps = 29/549 (5%)
Query: 7 IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
IK G D +S ++ + KF A + RD +++N +ISG + A
Sbjct: 27 IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW 86
Query: 67 KLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYLVSGFIENY 123
LF ++ G D ++FS L+K S++ E VHG+ +K G+ VY+ S ++ Y
Sbjct: 87 CLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMY 146
Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF-----VEMR-SLGLEL 177
AK + A F++ + ++V++ A++ G+V + K F +EM+ ++ ++
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFV---QVRDIKTAFWLLGLMEMKAAVTMDA 203
Query: 178 NEFS-LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
F+ L +L +Q+H +K+G + + NA+++ Y CG DA ++F
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT--ICNAMISSYADCGSVSDAKRVF 261
Query: 237 DEI-TEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
D + D++SW+ IA AF LF ++ + + + YT LLS+ GE
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGK--CGQVNDARSIFDYLIFKDSVSWNSMIA 350
GK + K G +V S NALISMY + G + DA S+F+ L KD +SWNS+I
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
G+++ G A+ F ++ + + Y +++L + S+ +L+ Q+H+ KSGF+
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 441
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNA-VHINALASVLVYAS--CHAEALELYR 467
++ +IS LI Y KC + +++ +I K++ V NA+ +L YA +L+L+
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM--ILGYAQHGLGQVSLDLFS 499
Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCK 525
+ +++ TF+ +L AC+ +++G + L ++ Y +E +A +D+ +
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL-MEPVYKIQPRMEHYAAAVDLLGR 558
Query: 526 CGTIEDAKR 534
G + AK
Sbjct: 559 AGLVNKAKE 567
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 210/417 (50%), Gaps = 24/417 (5%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ L+IK G+ + + ++L+ + K AF + + +++NALI+G +
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVR 181
Query: 61 QSGPALKLFDRLRYQ-GLRPDAFTFSSLVKA------CGSLQENEIVHGVCLKLGFSSRV 113
A L + + + DA TF+ L+ C L++ VH LKLG +
Sbjct: 182 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEI 238
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCL--DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR 171
+ + I +YA G + A+ F D L D +++ +M+ G+ + + + E+F++M+
Sbjct: 239 TICNAMISSYADCGSVSDAKRVF-DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 297
Query: 172 SLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR--C 226
+E + ++ T +L A + G+ +HG +K G NA++++Y++
Sbjct: 298 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ--VTSATNALISMYIQFPT 355
Query: 227 GQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLL 283
G DA+ +F+ + D++SW+ I A G+ +A F LR ++ ++++Y LL
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 415
Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS- 342
S L+ G+QI A K GF+ + ++LI MY KCG + AR F + K S
Sbjct: 416 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 475
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
V+WN+MI GY+++G +LD+F M ++ + T +IL A S++ +++ +++
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 378/739 (51%), Gaps = 21/739 (2%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLF-DR 71
D +L T +I+ + + RF+FD +++++ +NA+IS +R L+ F +
Sbjct: 119 DDVLCTRIITMYAMCGSPDDS-RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 72 LRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
+ L PD FT+ ++KAC + + I VHG+ +K G V++ + + Y G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS----KEVFVEMRSLGLELNEFSLTA 184
+ A F + + V++ +M+ + NG ++S E+ E + +L
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 185 VLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
VL +E G+ +HG+ VK+ + LNNA+M++Y +CG +A +F
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELV--LNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 242 PDVVSWSERIAAACDGVEAFGLFKDLRF-----NDFQINEYTMINLLSSVGGERILRAGK 296
+VVSW+ + + G F LR D + +E T++N + E L + K
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 297 QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENG 356
++ + K F+ + NA ++ Y KCG ++ A+ +F + K SWN++I G++++
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 357 FFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS 416
+LD M L+P+ +T+ S+L A S KSL+ +VH II++ D +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 417 CLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV 476
+++ Y C L + + ++ K+ V N + + + AL ++R + ++
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 477 NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAF 536
G + V AC+ + L G+ H ALK + D F+ ++IDMY K G+I + + F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 537 RKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVR 596
+ S A WNAM+MGY HG E LF +M + G PD++T+L VLT+C H+GL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 597 EARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA-KMTIDQMPIPPDAHIWQSLLS 655
E YL M GL P L+HYAC++D+LGR G L+ A ++ ++M D IW+SLLS
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 656 ACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKE 715
+C I+ N+++G +KL EL+P+ YVLLSNLYA G W DV K+R+ M E L K+
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 716 PGYSWIHVGGYTHHFYAGD 734
G SWI + F G+
Sbjct: 836 AGCSWIELNRKVFSFVVGE 854
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 151/638 (23%), Positives = 295/638 (46%), Gaps = 48/638 (7%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
++ L++K G D + L+S + A + R+++++N++I +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 62 SGPALKLFDRLRYQ----GLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSR 112
S + L + + PD T +++ C +E EI VHG +KL
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA--REREIGLGKGVHGWAVKLRLDKE 326
Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
+ L + ++ Y+K G I +A+M F+ + + V++ MV G+ G+ + +V +M +
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 173 LG--LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHL-NNAIMNLYVRC 226
G ++ +E ++ + F + +++H + +K F V N L NA + Y +C
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF---VYNELVANAFVASYAKC 443
Query: 227 GQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
G A ++F I V SW+ I A + D + ++ + + +T+ +LL
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
S+ + LR GK++ F + + + +++S+Y CG++ +++FD + K V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
SWN++I GY +NGF ++AL +F M+ + + G +M + A S SL+ + H++
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 404 IKSGFLLDDSMISC-LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
+K L DD+ I+C LI Y K ++ +S +V + + +K+ NA+ EA
Sbjct: 624 LKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 682
Query: 463 LELYRTIWGSCREVNGSTFSIVLKAC-------AAMTDLEQGKAIHCLALKARYDQDIFV 515
++L+ + + + TF VL AC + L+Q K+ L ++
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH------ 736
Query: 516 ESAVIDMYCKCGTIEDAKRAF-RKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKF 573
+ VIDM + G ++ A R ++ ++ G W +++ H + K+ F
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL--F 794
Query: 574 GVKPDEITYLAVLTSCCHAGL-----VREARTYLSCMS 606
++P++ VL S +AGL VR+ R ++ MS
Sbjct: 795 ELEPEKPENY-VLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 481 FSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI 539
++L+A D+E G+ IH L + R D + + +I MY CG+ +D++ F +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 540 CRDSLAGWNAMMMGYAQHGCYHEVSNLFNKM-SKFGVKPDEITYLAVLTSC 589
+L WNA++ Y+++ Y EV F +M S + PD TY V+ +C
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 349 bits (895), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/674 (29%), Positives = 356/674 (52%), Gaps = 8/674 (1%)
Query: 87 LVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
L++ C SL+E + + K G + + + + + G + A F NV
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFGV 203
Y M+ G+ + DK+ + FV MR +E ++ T +L G +++ G++IHG V
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 204 KVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGVE--A 260
K GF + + N+Y +C Q +A K+FD + E D+VSW+ +A + +G+ A
Sbjct: 163 KSGFSLDL--FAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 261 FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISM 320
+ K + + + + T++++L +V R++ GK+I + + GF +V+I AL+ M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 321 YGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTM 380
Y KCG + AR +FD ++ ++ VSWNSMI Y +N +A+ +F ML+ + P ++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 381 ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDK 440
L A ++ L++ +H ++ G + S+++ LI+ Y KC ++ + + ++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 441 KNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
+ V NA+ +AL + + + + T+ V+ A A ++ K I
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 501 HCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCY 560
H + +++ D+++FV +A++DMY KCG I A+ F + + WNAM+ GY HG
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 561 HEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYAC 620
LF +M K +KP+ +T+L+V+++C H+GLV M + + + ++HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 621 IVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDN 680
+VDLLGR G L A I QMP+ P +++ ++L AC I+ N++ A +L EL PD+
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 681 ESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQS 740
+VLL+N+Y +A MW VG++R M + L K PG S + + H F++G ++H S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 741 KEIYKELIKLYEHM 754
K+IY L KL H+
Sbjct: 701 KKIYAFLEKLICHI 714
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 158/611 (25%), Positives = 296/611 (48%), Gaps = 21/611 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI L+ KNG + + T L+S F ++ A R ++ + Y+ ++ G A+
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
AL+ F R+RY + P + F+ L+K CG E + +HG+ +K GFS ++ ++
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
G YAK ++ A F + D V++ +V GY NG + E+ M L+
Sbjct: 175 GLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 178 NEFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
+ ++ +VL A ++ G++IHG+ ++ GF S V +++ A++++Y +CG A +
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV--NISTALVDMYAKCGSLETARQ 292
Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
+FD + E +VVSW+ I A + EA +F+ + + + +++ L +
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
L G+ I ++G VS+ N+LISMY KC +V+ A S+F L + VSWN+MI G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
+++NG AL+ F M ++ P+ +T S++ A++ A +H +++S +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWG 471
+ + L+ Y KC A+ ++ + + +++ NA+ ALEL+ +
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 472 SCREVNGSTFSIVLKACAAMTDLEQGKAIHCL-ALKARYDQDIFVE--SAVIDMYCKCGT 528
+ NG TF V+ AC+ +E G + C +K Y ++ ++ A++D+ + G
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAG--LKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK--FGVKPDEITYLAVL 586
+ +A ++ M+G Q H+ N K ++ F + PD+ Y +L
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQ---IHKNVNFAEKAAERLFELNPDDGGYHVLL 647
Query: 587 TSCCHAGLVRE 597
+ A + E
Sbjct: 648 ANIYRAASMWE 658
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 223/750 (29%), Positives = 387/750 (51%), Gaps = 37/750 (4%)
Query: 25 FTKFADFRRAFRFLFD--TQNRDIITYNALISGLARFCQSGPALKLFD---RLRYQGLRP 79
F +F R LFD +Q + N IS R AL +F +L Y G
Sbjct: 17 FQRFYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHM 76
Query: 80 DAFTFSSLVKAC-GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
D T +KAC G L+ +HG GF+S V + + + Y K+G +A F +
Sbjct: 77 DEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 136
Query: 139 CLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---- 194
+D D V++ ++ G+ N + V M+S G+ + F+ + L SF V
Sbjct: 137 LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTAL--SFCVGSEGFL 191
Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
G Q+ VK G S + + N+ + +Y R G A ++FDE++ D++SW+ ++
Sbjct: 192 LGLQLQSTVVKTGLESDLV--VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 254 ACD----GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
G EA +F+D+ +++ + +++++ E L+ +QI C K G+
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
++ +GN L+S Y KCG + +S+F + ++ VSW +MI+ ++ A+ +F +M
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMR 364
Query: 370 EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALN 429
+ PN T ++ AV ++ +K+ +++H IK+GF+ + S+ + IT Y K AL
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 424
Query: 430 ESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACA 489
++K+ +I + + NA+ S EAL+++ + N TF VL A A
Sbjct: 425 DAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIA 483
Query: 490 AMTDL--EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
D+ +QG+ H LK + V SA++DMY K G I+++++ F ++ + + W
Sbjct: 484 FAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVW 543
Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
+++ Y+ HG + V NLF+KM K V PD +T+L+VLT+C G+V + + M +
Sbjct: 544 TSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
Query: 608 LHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
++ L P EHY+C+VD+LGR G L+ A+ + ++P P + QS+L +C ++GN+ +G
Sbjct: 604 VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGA 663
Query: 668 LAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYT 727
+E++P+ +YV + N+YA W+ ++RK M++K + KE G+SWI VG
Sbjct: 664 KVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTE 723
Query: 728 -----HHFYAGDSSHSQSKEIYK--ELIKL 750
F +GD SH +S EIY+ E+I L
Sbjct: 724 GSLTMQGFSSGDKSHPKSDEIYRMVEIIGL 753
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 291/558 (52%), Gaps = 36/558 (6%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+ +G +S ++ + K F A + + D++++N ++SG F
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG---FD 153
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC-GS------LQENEIVHGVCLKLGFSSRV 113
+ AL R++ G+ DAFT+S+ + C GS LQ + +K G S +
Sbjct: 154 DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ----LQSTVVKTGLESDL 209
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFD-KSKEVFVEMRS 172
+ + FI Y++SG A F + D +++ +++ G G F ++ +F +M
Sbjct: 210 VVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR 269
Query: 173 LGLELNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
G+EL+ S T+V+ D+K QIHG +K G+ S + + N +M+ Y +CG
Sbjct: 270 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL--EVGNILMSRYSKCGV- 326
Query: 230 LDAVK-MFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
L+AVK +F +++E +VVSW+ I++ D +A +F ++RF+ NE T + L+++V
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISSNKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKC 384
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
++ G +I C K GF+ S+GN+ I++Y K + DA+ F+ + F++ +SWN+M
Sbjct: 385 NEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAM 444
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSK--SLKQAMQVHSHIIKS 406
I+G+++NGF ++AL MF ++ PN YT S+L A++ ++ S+KQ + H+H++K
Sbjct: 445 ISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503
Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAE---AL 463
G + S L+ Y K ++ES++V +E+ +KN S++ S H + +
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF---VWTSIISAYSSHGDFETVM 560
Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVID 521
L+ + + TF VL AC +++G I + ++ Y+ + E S ++D
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV-YNLEPSHEHYSCMVD 619
Query: 522 MYCKCGTIEDAKRAFRKI 539
M + G +++A+ ++
Sbjct: 620 MLGRAGRLKEAEELMSEV 637
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/663 (30%), Positives = 352/663 (53%), Gaps = 16/663 (2%)
Query: 100 VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGE 159
VHG ++ G S+ + + + YAK G++ A F + D V++ +++ GY NG
Sbjct: 36 VHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95
Query: 160 FDKS---KEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCN 213
S ++F EMR+ + N ++L + A ++ G Q H VK+ +
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI-- 153
Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC------DGVEAFGLFKDL 267
+++ +++ +Y + G D +K+F + E + +WS ++ + ++ F LF
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
+ + ++Y +LSS+ + G+QI K G + V++ NAL++MY KC +
Sbjct: 214 K-EEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
N+A +FD ++S++W++M+ GYS+NG +A+ +F M + P+ YT+ +L A
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
S+ L++ Q+HS ++K GF + L+ Y K L ++++ + +++
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
+L S V S + EAL LYR + + N T + VLKAC+++ LE GK +H +K
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLF 567
+ ++ + SA+ MY KCG++ED FR+ + WNAM+ G + +G E LF
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 568 NKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGR 627
+M G++PD++T++ ++++C H G V Y + MSD GL P+++HYAC+VDLL R
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLL 687
G L+ AK I+ I +W+ LLSAC +G +LG+ AG KL+ L STYV L
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQL 632
Query: 688 SNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
S +Y + G DV ++ K M+ + KE G SWI + H F GD+ H +E K+L
Sbjct: 633 SGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET-KDL 691
Query: 748 IKL 750
+ L
Sbjct: 692 VCL 694
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/574 (27%), Positives = 281/574 (48%), Gaps = 20/574 (3%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR--- 58
++ +I+ G + L++ + K +A +D++++N+LI+G ++
Sbjct: 36 VHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95
Query: 59 FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYL 115
S ++LF +R Q + P+A+T + + KA SLQ + + H + +K+ +Y+
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYV 155
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEV---FVEMRS 172
+ + Y K+G + F + + ++ MV GY G +++ +V F+ +
Sbjct: 156 DTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKE 215
Query: 173 LGLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK 229
G + +++ TAV L A+ V G QIH +K G L V L+NA++ +Y +C
Sbjct: 216 EGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA--LSNALVTMYSKCESL 272
Query: 230 LDAVKMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSV 286
+A KMFD + + ++WS + + +EA LF + + +EYT++ +L++
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 287 GGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
L GKQ+ +F K+GF + AL+ MY K G + DAR FD L +D W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
S+I+GY +N +AL ++ M +IPN TMAS+L+A S+ +L+ QVH H IK
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
GF L+ + S L T Y KC +L + V K+ V NA+ S L + EALEL+
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQGK-AIHCLALKARYDQDIFVESAVIDMYCK 525
+ E + TF ++ AC+ +E+G + ++ + D + + ++D+ +
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 526 CGTIEDAKRAFRKICRD-SLAGWNAMMMGYAQHG 558
G +++AK D L W ++ HG
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 189/384 (49%), Gaps = 7/384 (1%)
Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
T++ L+ +R L AG+ + + G + N L++ Y KCG++ A SIF+ +
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 338 IFKDSVSWNSMIAGYSENGFFNQA---LDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
I KD VSWNS+I GYS+NG + + + +F M ++PN YT+A I +A S+ +S
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
Q H+ ++K D + + L+ Y K + + +V + + ++N + + S
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 455 YASCHAEALELYRTIWGSCREVNGS--TFSIVLKACAAMTDLEQGKAIHCLALKARYDQD 512
EA++++ E + S F+ VL + AA + G+ IHC+ +K
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 513 IFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSK 572
+ + +A++ MY KC ++ +A + F + W+AM+ GY+Q+G E LF++M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 573 FGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLE 632
G+KP E T + VL +C + E + S + L G L +VD+ + G L
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLA 374
Query: 633 GAKMTIDQMPIPPDAHIWQSLLSA 656
A+ D + D +W SL+S
Sbjct: 375 DARKGFDCLQ-ERDVALWTSLISG 397
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 179/346 (51%), Gaps = 14/346 (4%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+ + IKNG LS L++ ++K A + + +R+ IT++A+++G ++
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
+S A+KLF R+ G++P +T ++ AC L+E + +H LKLGF ++ +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVA-YTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
++ YAK+G + A F DCL +VA +T+++ GYV N + +++ ++ M++ G+
Sbjct: 362 ALVDMYAKAGCLADARKGF-DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
N+ ++ +VL A + G+Q+HG +K GF G+ + +A+ +Y +CG D
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYSKCGSLEDGN 478
Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
+F DVVSW+ I+ G EA LF+++ + ++ T +N++S+ +
Sbjct: 479 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Query: 291 ILRAGK-QIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
+ G ++G V ++ + + GQ+ +A+ +
Sbjct: 539 FVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 16/259 (6%)
Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
M + L P+ T+ L S ++L VH II++G + L+ Y
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60
Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYA-----SCHAEALELYRTIWGSCREVNG 478
KC L ++ + + I K+ V N+L + Y+ S ++L+R + N
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSL--ITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 479 STFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK 538
T + + KA +++ G+ H L +K DI+V+++++ MYCK G +ED + F
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 539 ICRDSLAGWNAMMMGYAQHGCYHE---VSNLFNKMSKFGVKPDEI--TYLAVLTSCCHAG 593
+ + W+ M+ GYA G E V NLF + + G D + L+ L + + G
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 594 LVREARTYLSCMSDLHGLI 612
L R+ + C++ +GL+
Sbjct: 239 LGRQ----IHCITIKNGLL 253
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 343 bits (879), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 340/641 (53%), Gaps = 40/641 (6%)
Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR-----SLG 174
I +Y ++G A F+ +V+Y M+ GY+ NGEF+ ++++F EM S
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
+ + + LG + ++ E + VC+ N +++ Y + G DA
Sbjct: 131 VMIKGYVRNRNLGKARELFE----------IMPERDVCSW--NTMLSGYAQNGCVDDARS 178
Query: 235 MFDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
+FD + E + VSW+ ++A EA LFK R N + +++ +GG
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-REN------WALVSWNCLLGG--F 229
Query: 292 LRAGKQIQA--FCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
++ K ++A F + +VVS N +I+ Y + G++++AR +FD +D +W +M+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSW-NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
+GY +N +A ++F M E + + +A ++ + M++ +
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG--------ERMEMAKELFDVMPC 340
Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
+ S + +IT Y +C ++E+K + ++ K++ V A+ + + EAL L+ +
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
+N S+FS L CA + LE GK +H +K Y+ FV +A++ MYCKCG+I
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
E+A F+++ + WN M+ GY++HG F M + G+KPD+ T +AVL++C
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
H GLV + R Y M+ +G++P +HYAC+VDLLGR GLLE A + MP PDA I
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
W +LL A ++GN +L A K+ ++P+N YVLLSNLYAS+G W DVGKLR M++
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
K + K PGYSWI + TH F GD H + EI+ L +L
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 207/457 (45%), Gaps = 41/457 (8%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRL- 72
D + +I + + + +A RD+ ++N ++SG A+ A +FDR+
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 73 -----RYQGLRPDAFTFSSLVKACGSLQENE---IVHGVCLKLGFSSRVYLVSG------ 118
+ L S + +AC + E +V CL GF + +V
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 119 -----------FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVF 167
I YA+SG+I A F + D +TAMV GY+ N ++++E+F
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 168 VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVR 225
+M E NE S A+L +GE++ K F C +++ N ++ Y +
Sbjct: 305 DKM----PERNEVSWNAMLAGYV---QGERME--MAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 226 CGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINL 282
CG+ +A +FD++ + D VSW+ IA + EA LF + ++N + +
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
LS+ L GKQ+ K G+ +GNAL+ MY KCG + +A +F + KD
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
VSWN+MIAGYS +GF AL F M L P+ TM ++L A S++ + + Q
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYT 535
Query: 403 IIKS-GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
+ + G + + +C++ G+ L ++ ++ +
Sbjct: 536 MTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 127/576 (22%), Positives = 250/576 (43%), Gaps = 35/576 (6%)
Query: 22 ISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDA 81
IS + + A R ++YN +ISG R + A KLFD + + L
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 82 FTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
V+ + E+ + + S ++SG YA++G + A F +
Sbjct: 131 VMIKGYVRNRNLGKARELFE-IMPERDVCSWNTMLSG----YAQNGCVDDARSVFDRMPE 185
Query: 142 LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGF 201
++V++ A++ YV N + +++ +F + L S +LG K+ + F
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQF 241
Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV--- 258
+ V N I+ Y + G+ +A ++FDE DV +W+ ++
Sbjct: 242 FDSMNVRDVVS---WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSS-VGGERILRAGKQIQAFCYKVGFMEVVSIGNAL 317
EA LF + + NE + +L+ V GER+ ++ + V VS N +
Sbjct: 299 EARELFDKMP----ERNEVSWNAMLAGYVQGERM-----EMAKELFDVMPCRNVSTWNTM 349
Query: 318 ISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
I+ Y +CG++++A+++FD + +D VSW +MIAGYS++G +AL +F M N
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
+ +S L ++ +L+ Q+H ++K G+ + + L+ Y KC ++ E+ + E
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
+ K+ V N + + AL + ++ + + +T VL AC+ +++G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 498 KAIHCLALKARYDQDIFVESA----VIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMM 552
+ + D + S ++D+ + G +EDA + + + A W ++
Sbjct: 530 RQYFYTMTQ---DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
HG +K+ F ++P+ +L++
Sbjct: 587 ASRVHGNTELAETAADKI--FAMEPENSGMYVLLSN 620
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 50/393 (12%)
Query: 5 LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARFCQSG 63
+L K+ + + L+ F K A +F FD+ N RD++++N +I+G A+ +
Sbjct: 209 MLFKSRENWALVSWNCLLGGFVKKKKIVEARQF-FDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 64 PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ----------------ENEIVHGVCL-- 105
A +LFD Q D FT++++V G +Q NE+ L
Sbjct: 268 EARQLFDESPVQ----DVFTWTAMV--SGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321
Query: 106 -----KLGFSSRVYLV---------SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMV 151
++ + ++ V + I YA+ G+I A+ F D V++ AM+
Sbjct: 322 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 381
Query: 152 CGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV---KEGEQIHGFGVKVGFL 208
GY +G ++ +FV+M G LN S ++ L DV + G+Q+HG VK G+
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 209 SGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFK 265
+G + NA++ +Y +CG +A +F E+ D+VSW+ IA G A F+
Sbjct: 442 TGC--FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 266 DLRFNDFQINEYTMINLLSSVGGERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKC 324
++ + ++ TM+ +LS+ ++ G+Q G M ++ + G+
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 325 GQVNDARSIFDYLIFK-DSVSWNSMIAGYSENG 356
G + DA ++ + F+ D+ W +++ +G
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 165/351 (47%), Gaps = 32/351 (9%)
Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
N IS Y + G+ N+A +F + SVS+N MI+GY NG F A +F M E L+
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 375 PNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRV 434
+ +++ +++L +A ++ + + ++M+S Y + +++++ V
Sbjct: 128 ----SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLS----GYAQNGCVDDARSV 179
Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
+ +KN V NAL S V S EA L+++ RE +++V C +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-----RE----NWALVSWNCLLGGFV 230
Query: 495 EQGKAIHCLALKARYD-QDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMG 553
++ K + + +D+ + +I Y + G I++A++ F + + W AM+ G
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
Y Q+ E LF+KM + +E+++ A+L AG V+ R ++ +L ++P
Sbjct: 291 YIQNRMVEEARELFDKMP----ERNEVSWNAML-----AGYVQGERMEMA--KELFDVMP 339
Query: 614 --QLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
+ + ++ + G + AK D+MP D W ++++ + G+
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH 389
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ L+K G+ + L+ + K A + +DI+++N +I+G +R
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
AL+ F+ ++ +GL+PD T +++ AC
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
D DI + I Y + G +A R F+++ R S +N M+ GY ++G + LF++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE--HYACIVDLLGR 627
M + D +++ ++ G VR L +L ++P+ + + ++ +
Sbjct: 121 MP----ERDLVSWNVMIK-----GYVRNRN--LGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 628 VGLLEGAKMTIDQMPIPPDAHIWQSLLSA 656
G ++ A+ D+MP D W +LLSA
Sbjct: 170 NGCVDDARSVFDRMPEKNDVS-WNALLSA 197
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 342 bits (877), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 212/766 (27%), Positives = 384/766 (50%), Gaps = 16/766 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
I+ +IK G + L L+S + K A + + +R + + +IS +
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
+ AL LF+ + G P+ FTFSS+V++C L++ VHG +K GF + S
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
+ Y+K G+ A F + D +++T M+ V ++ ++ + + EM G+
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 178 NEFSLTAVLGAS--FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
NEF+ +LGAS ++ G+ IH + G V L ++++ Y + + DAV++
Sbjct: 224 NEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVV--LKTSLVDFYSQFSKMEDAVRV 281
Query: 236 FDEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
+ E DV W+ ++ + EA G F ++R Q N +T +LS R L
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVN-DARSIFDYLIFKDSVSWNSMIAG 351
GKQI + KVGF + +GNAL+ MY KC +A +F ++ + VSW ++I G
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
++GF + M++ + PN T++ +L A S + +++ +++H+++++ +D
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH--VD 459
Query: 412 DSMI--SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
M+ + L+ Y ++ + V+ + +++ + +L + H AL + +
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519
Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
+G ++ + + A A + LE GK +HC ++K+ + V ++++DMY KCG++
Sbjct: 520 YGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSL 579
Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
EDAK+ F +I + WN ++ G A +G + F +M +PD +T+L +L++C
Sbjct: 580 EDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC 639
Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
+ L Y M ++ + PQ+EHY +V +LGR G LE A ++ M + P+A I
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 699
Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
+++LL AC GN+ LG +K L L P + + Y+LL++LY +G K R M E
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759
Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSH-SQSKEIYKELIKLYEHM 754
K L K+ G S + V G H F + D + ++ IY E+ + E +
Sbjct: 760 KRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEI 805
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 1/297 (0%)
Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
R G I K G +E + + N L+S+Y K + +AR +FD + + +W MI+ +
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
+++ F AL +F M+ PN +T +S++ + + + + +VH +IK+GF +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
+ S L Y KC E+ + S + + + + S LV A EAL+ Y + +
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
N TF +L A ++ LE GK IH + ++ ++++++D Y + +EDA
Sbjct: 220 GVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
R + W +++ G+ ++ E F +M G++P+ TY A+L+ C
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 5/301 (1%)
Query: 390 SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINAL 449
S S + + +H +IK G L + + + L++ Y K + + ++++ E+ + +
Sbjct: 36 SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVM 95
Query: 450 ASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARY 509
S + A AL L+ + S N TFS V+++CA + D+ G +H +K +
Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
+ + V S++ D+Y KCG ++A F + W M+ + E +++
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVG 629
M K GV P+E T++ +L + GL E + + G+ + +VD +
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 630 LLEGAKMTIDQMPIPPDAHIWQSLLSACT--IYGNIDLGLLAGSKLLELQPDNESTYVLL 687
+E A ++ D +W S++S + +G + L LQP+N + +L
Sbjct: 274 KMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 688 S 688
S
Sbjct: 333 S 333
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 225/728 (30%), Positives = 360/728 (49%), Gaps = 66/728 (9%)
Query: 85 SSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDN 144
+ C ++ + +++H L G + + L S I Y G + A R D
Sbjct: 32 PPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDA 90
Query: 145 VAY--TAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFD---VKEGEQIH 199
Y +++ Y NG +K +F M SL + ++ V A + V+ GE H
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACD 256
+ GF+S V + NA++ +Y RC DA K+FDE++ DVVSW+ E A
Sbjct: 151 ALSLVTGFISNV--FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK 208
Query: 257 GVEAFGLFKDLRFNDF--QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIG 314
A +F + N+F + + T++N+L GKQ+ F ++ + +G
Sbjct: 209 PKVALEMFSRMT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF--------- 365
N L+ MY KCG +++A ++F + KD VSWN+M+AGYS+ G F A+ +F
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 366 -------------------------C-HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQV 399
C ML + PN T+ S+L ++ +L ++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 400 HSHIIK-------SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
H + IK +G ++ +I+ LI Y KC ++ ++ + + K + +
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 453 LVYASCHAEA---LELYRTIWGS-CR-EVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
Y+ H +A LEL ++ C+ N T S L ACA++ L GK IH AL+
Sbjct: 448 GGYSQ-HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 508 RYDQ-DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNL 566
+ + +FV + +IDMY KCG+I DA+ F + + W ++M GY HG E +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 567 FNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLG 626
F++M + G K D +T L VL +C H+G++ + Y + M + G+ P EHYAC+VDLLG
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 627 RVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVL 686
R G L A I++MP+ P +W + LS C I+G ++LG A K+ EL +++ +Y L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 687 LSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKE 746
LSNLYA+AG W DV ++R M+ K + K PG SW+ T F+ GD +H +KEIY+
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746
Query: 747 LIKLYEHM 754
L+ +HM
Sbjct: 747 LL---DHM 751
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 245/540 (45%), Gaps = 61/540 (11%)
Query: 17 LSTTLISHFTKFADFRRAFRFL--FDTQNRDIITYNALISGLARFCQSGPALKLFDRLRY 74
L++ LIS + A L F + + +N+LI + L LF +
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 75 QGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS 131
PD +TF + KACG S++ E H + L GF S V++ + + Y++ +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 132 AEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS-LGLELNEFSLTAVLG--A 188
A F + D V++ +++ Y G+ + E+F M + G + +L VL A
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 189 SFDVKE-GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQK------------------ 229
S G+Q+H F V + + + N ++++Y +CG
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNM--FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 230 -------------LDAVKMFDEITEP----DVVSWSERIAAACD---GVEAFGLFKDLRF 269
DAV++F+++ E DVV+WS I+ G EA G+ + +
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 270 NDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKV-------GFMEVVSIGNALISMYG 322
+ + NE T+I++LS L GK+I + K G + + N LI MY
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 323 KCGQVNDARSIFDYLIFK--DSVSWNSMIAGYSENGFFNQALDMFCHMLE--FSLIPNGY 378
KC +V+ AR++FD L K D V+W MI GYS++G N+AL++ M E PN +
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-CLITTYGKCNALNESKRVLSE 437
T++ L A ++ +L+ Q+H++ +++ +S CLI Y KC ++++++ V
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
+ KN V +L + EAL ++ + +++G T +VL AC+ ++QG
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 224/492 (45%), Gaps = 56/492 (11%)
Query: 3 YSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS 62
++L + G + + L++ +++ A + + D++++N++I A+ +
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 63 GPALKLFDRLRYQ-GLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVSG 118
AL++F R+ + G RPD T +++ C SL + + +H + +++ +
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMR------- 171
++ YAK G + A F + D V++ AMV GY G F+ + +F +M+
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 172 ----------------------------SLGLELNEFSLTAVLGASFDVK---EGEQIHG 200
S G++ NE +L +VL V G++IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 201 FGVKVGF-----LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT--EPDVVSWSERIAA 253
+ +K G N + N ++++Y +C + A MFD ++ E DVV+W+ I
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 254 AC---DGVEAFGLFKDLRFNDFQI--NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
D +A L ++ D Q N +T+ L + LR GKQI A+ +
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 309 EV-VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
V + + N LI MY KCG ++DAR +FD ++ K+ V+W S++ GY +G+ +AL +F
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLDDSMISCLITTYGKCN 426
M +G T+ +L A S+S + Q M+ + + G +CL+ G+
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 427 ALNESKRVLSEI 438
LN + R++ E+
Sbjct: 630 RLNAALRLIEEM 641
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 173/367 (47%), Gaps = 35/367 (9%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDTQNR----DIITYNALISGLARFCQSGPALKLF 69
D + +++ +++ F A R Q D++T++A ISG A+ AL +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 70 DRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL-------GFSSRVYLVSGF 119
++ G++P+ T S++ C G+L + +H +K G +++
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 120 IENYAKSGEIVSAEMCFRDCL---DLDNVAYTAMVCGYVWNGEFDKSKEVFVEM--RSLG 174
I+ YAK ++ +A F D L + D V +T M+ GY +G+ +K+ E+ EM
Sbjct: 414 IDMYAKCKKVDTARAMF-DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 175 LELNEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
N F+++ L A ++ G+QIH + ++ + V ++N ++++Y +CG D
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALR-NQQNAVPLFVSNCLIDMYAKCGSISD 531
Query: 232 AVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A +FD + + V+W+ + G EA G+F ++R F+++ T++ +L +
Sbjct: 532 ARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH 591
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGN----ALISMYGKCGQVNDA-RSIFDYLIFKDSV 343
++ G + + ++ + VS G L+ + G+ G++N A R I + + V
Sbjct: 592 SGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 344 SWNSMIA 350
W + ++
Sbjct: 649 VWVAFLS 655
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 221/712 (31%), Positives = 370/712 (51%), Gaps = 24/712 (3%)
Query: 59 FCQSGP---ALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSR 112
C +G A+KL + ++ + D F +LV+ C + +E V+ + L S
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128
Query: 113 VYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRS 172
V L + F+ + + G +V A F + + ++ +V GY G FD++ ++ M
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 173 LG-LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQ 228
+G ++ + ++ VL G D+ G+++H V+ G+ + + NA++ +YV+CG
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDI--DVVNALITMYVKCGD 246
Query: 229 KLDAVKMFDEITEPDVVSWSERIAA-----AC-DGVEAFGLFKDLRFNDFQINEYTMINL 282
A +FD + D++SW+ I+ C +G+E F + L + + ++I+
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
+G R+ G+ I A+ GF +S+ N+L MY G +A +F + KD
Sbjct: 307 CELLGDRRL---GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
VSW +MI+GY N ++A+D + M + S+ P+ T+A++L A + L +++H
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
IK+ + + + LI Y KC ++++ + I +KN + ++ + L + EA
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 463 LELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDM 522
L R + + + N T + L ACA + L GK IH L+ D F+ +A++DM
Sbjct: 484 LIFLRQMKMTLQP-NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDM 542
Query: 523 YCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY 582
Y +CG + A F +D + WN ++ GY++ G V LF++M K V+PDEIT+
Sbjct: 543 YVRCGRMNTAWSQFNSQKKD-VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITF 601
Query: 583 LAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP 642
+++L C + +VR+ Y S M D +G+ P L+HYAC+VDLLGR G L+ A I +MP
Sbjct: 602 ISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660
Query: 643 IPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGK 702
+ PD +W +LL+AC I+ IDLG L+ + EL + Y+LL NLYA G W +V K
Sbjct: 661 VTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAK 720
Query: 703 LRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
+R+ MKE L + G SW+ V G H F + D H Q+KEI L YE M
Sbjct: 721 VRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 225/432 (52%), Gaps = 8/432 (1%)
Query: 153 GYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLG-ASFDVKEGEQIHGFGVKVGFLSGV 211
G NG+ +++ ++ M+ L + ++E A++ + + E + + + +S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 212 CNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF-KDL 267
L NA + ++VR G +DA +F +++E ++ SW+ + A G EA L+ + L
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 268 RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQV 327
+ + YT +L + GG L GK++ + G+ + + NALI+MY KCG V
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 328 NDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAV 387
AR +FD + +D +SWN+MI+GY ENG ++ L++F M S+ P+ T+ S++ A
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 388 SNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHIN 447
+ +H+++I +GF +D S+ + L Y + E++++ S +++K+ V
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 448 ALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKA 507
+ S Y +A++ YR + + + T + VL ACA + DL+ G +H LA+KA
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 508 RYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYA-QHGCYHEVSNL 566
R + V + +I+MY KC I+ A F I R ++ W +++ G + C+ + +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL--I 485
Query: 567 FNKMSKFGVKPD 578
F + K ++P+
Sbjct: 486 FLRQMKMTLQPN 497
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 214/447 (47%), Gaps = 13/447 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
+++ +++ G+ LD + LI+ + K D + A R LFD RDII++NA+ISG
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA-RLLFDRMPRRDIISWNAMISGYFEN 275
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
L+LF +R + PD T +S++ AC L + + +H + GF+ + +
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
+ + Y +G AE F D V++T M+ GY +N DK+ + + M ++
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
+E ++ AVL A D+ G ++H +K +S V + N ++N+Y +C A+
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI--VANNLINMYSKCKCIDKAL 453
Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI-- 291
+F I +V+SW+ IA F LR + + + RI
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGA 513
Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
L GK+I A + G + NAL+ MY +CG++N A S F+ KD SWN ++ G
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTG 572
Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
YSE G + +++F M++ + P+ T S+L S S+ ++Q + S + G +
Sbjct: 573 YSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPN 632
Query: 412 DSMISCLITTYGKCNALNESKRVLSEI 438
+C++ G+ L E+ + + ++
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKM 659
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 352/683 (51%), Gaps = 17/683 (2%)
Query: 86 SLVKACG----SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLD 141
SL++ C SL+ ++VH L LG V L I Y + SA F + D
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN-FD 66
Query: 142 L--DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL-NEFSLTAVLGASFDVKE---G 195
+ D + +++ GY N F + EVF + + + + + F+ V+ A + G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 196 EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA--- 252
IH VK G++ V + ++++ +Y + +++++FDE+ E DV SW+ I+
Sbjct: 127 RMIHTLVVKSGYVCDVV--VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 253 AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
+ + +A LF + + F+ N ++ +S+ L GK+I C K GF
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
+ +AL+ MYGKC + AR +F + K V+WNSMI GY G +++ M+
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
P+ T+ SIL A S S++L +H ++I+S D + LI Y KC N ++
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
V S+ K A N + S + +A+E+Y + + + TF+ VL AC+ +
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
LE+GK IH ++R + D + SA++DMY KCG ++A R F I + + W M+
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
Y HG E F++M KFG+KPD +T LAVL++C HAGL+ E + S M +G+
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPD-AHIWQSLLSACTIYGNIDLGLLAGS 671
P +EHY+C++D+LGR G L A I Q P D A + +L SAC ++ LG
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 672 KLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFY 731
L+E PD+ STY++L NLYAS W+ ++R +MKE L K+PG SWI + HF+
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 732 AGDSSHSQSKEIYKELIKLYEHM 754
A D SH +++ +Y+ L L HM
Sbjct: 665 AEDRSHLRAENVYECLALLSGHM 687
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 147/603 (24%), Positives = 287/603 (47%), Gaps = 26/603 (4%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADF---RRAFRFLFDTQNRDIITYNALISGLAR 58
++ ++ G D +L +LI+ + D R F FD ++ D+ +N+L+SG ++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN-FDIRS-DVYIWNSLMSGYSK 83
Query: 59 FCQSGPALKLFDRLRYQGL-RPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVY 114
L++F RL + PD+FTF +++KA G+L ++H + +K G+ V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 115 LVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ S + YAK ++ F + + D ++ ++ + +GE +K+ E+F M S G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 175 LELNEFSLTAVLGAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
E N SLT + A ++ G++IH VK GF + ++N+A++++Y +C
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF--ELDEYVNSALVDMYGKCDCLEV 261
Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A ++F ++ +V+W+ I A D + + + ++ T+ ++L +
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
R L GK I + + + + +LI +Y KCG+ N A ++F + SWN M
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
I+ Y G + +A++++ M+ + P+ T S+L A S +L++ Q+H I +S
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
D+ ++S L+ Y KC E+ R+ + I KK+ V + S EAL +
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDE 501
Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKC 526
+ + +G T VL AC +++G ++++Y + +E S +ID+ +
Sbjct: 502 MQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS-QMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 527 GTIEDAKRAFRKICRDSLAGWNAMMMGYAQHG-CYHEVSNLFNKMSKFGVK--PDEITYL 583
G + +A ++ S NA ++ C H +L +++++ V+ PD+ +
Sbjct: 561 GRLLEAYEIIQQTPETSD---NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 584 AVL 586
VL
Sbjct: 618 MVL 620
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 10/269 (3%)
Query: 380 MASILEAVSNS-KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
+ S+L +NS KSL++ VH I+ G D + LI Y C ++ V
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 439 DKKNAVHI-NALASVLVYASCHAEALELYRTIWGSCREVNGS-TFSIVLKACAAMTDLEQ 496
D ++ V+I N+L S S + LE+++ + V S TF V+KA A+
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
G+ IH L +K+ Y D+ V S+++ MY K E++ + F ++ +A WN ++ + Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCH-AGLVREARTYLSCMSDLHGLIPQL 615
G + LF +M G +P+ ++ +++C L R + C+ G +L
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK--KGF--EL 241
Query: 616 EHY--ACIVDLLGRVGLLEGAKMTIDQMP 642
+ Y + +VD+ G+ LE A+ +MP
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+ + ++ D +L + L+ ++K + + AFR +D++++ +IS
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG 92
Q AL FD ++ GL+PD T +++ ACG
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACG 522
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 212/678 (31%), Positives = 342/678 (50%), Gaps = 17/678 (2%)
Query: 83 TFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDL 142
T+ K S+ H + GF + + L++ + + G I A F
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81
Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMR-SLGLELNE----FSLTAVLGASFDVKEGEQ 197
D + ++ G+ N S VF +R S L+ N F+++A G D + G
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR-DDRAGRV 140
Query: 198 IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG 257
IHG V G S + L + I+ +Y + + DA K+FD + E D + W+ I+
Sbjct: 141 IHGQAVVDGCDSELL--LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 258 ---VEAFGLFKDLRFND--FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVS 312
VE+ +F+DL N+ +++ T++++L +V + LR G QI + K G
Sbjct: 199 EMYVESIQVFRDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
+ IS+Y KCG++ ++F D V++N+MI GY+ NG +L +F ++
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
T+ S+ V S L +H + +KS FL S+ + L T Y K N + ++
Sbjct: 318 ARLRSSTLVSL---VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
++ E +K+ NA+ S +A+ L+R + S N T + +L ACA +
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
L GK +H L ++ I+V +A+I MY KCG+I +A+R F + + + WN M+
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
GY HG E N+F +M G+ P +T+L VL +C HAGLV+E + M +G
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 613 PQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSK 672
P ++HYAC+VD+LGR G L+ A I+ M I P + +W++LL AC I+ + +L K
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 673 LLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYA 732
L EL PDN +VLLSN++++ + +R+ K++ L K PGY+ I +G H F +
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTS 674
Query: 733 GDSSHSQSKEIYKELIKL 750
GD SH Q KEIY++L KL
Sbjct: 675 GDQSHPQVKEIYEKLEKL 692
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 10/359 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+SL K G + + T IS ++K + + + DI+ YNA+I G
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
++ +L LF L G R + T SLV G L +HG CLK F S + +
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALT 361
Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
Y+K EI SA F + + ++ AM+ GY NG + + +F EM+ N
Sbjct: 362 TVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 181 SLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
++T +L A + G+ +H F S + +++ A++ +Y +CG +A ++FD
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSI--YVSTALIGMYAKCGSIAEARRLFD 479
Query: 238 EITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRA 294
+T+ + V+W+ I+ G EA +F ++ + T + +L + +++
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539
Query: 295 GKQI-QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL-IFKDSVSWNSMIAG 351
G +I + ++ GF V ++ + G+ G + A + + I S W +++
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 335 bits (859), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 223/768 (29%), Positives = 395/768 (51%), Gaps = 23/768 (2%)
Query: 5 LLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSG 63
LL+ DP+ T LI + F + R +F+ D Y LI
Sbjct: 24 LLVTGRLRRDPLPVTKLIESYA-FMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLD 82
Query: 64 PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN----EIVHGVCLKLGFSSRVYLVSGF 119
A+ L+ RL + + F F S+++AC +E+ VHG +K G + +
Sbjct: 83 AAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSL 142
Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
+ Y ++G + AE F D VA++ +V + NGE K+ +F M G+E +
Sbjct: 143 LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202
Query: 180 FSLTAVLGASFDV---KEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMF 236
++ +V+ ++ + +HG + F + L N+++ +Y +CG L + ++F
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMF--DLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 237 DEITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILR 293
++I + + VSW+ I++ G +A F ++ + + N T+ ++LSS G ++R
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320
Query: 294 AGKQIQAFCYKVGF-MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
GK + F + S+ AL+ +Y +CG+++D ++ + ++ V+WNS+I+ Y
Sbjct: 321 EGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLY 380
Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
+ G QAL +F M+ + P+ +T+AS + A N+ + Q+H H+I++ + D+
Sbjct: 381 AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDE 439
Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
+ + LI Y K +++ + V ++I ++ V N++ EA+ L+ ++ S
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
E+N TF V++AC+++ LE+GK +H + + +D+F ++A+IDMY KCG + A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558
Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
+ FR + S+ W++M+ Y HG + FN+M + G KP+E+ ++ VL++C H+
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
G V E + Y + M G+ P EH+AC +DLL R G L+ A TI +MP DA +W S
Sbjct: 619 GSVEEGKYYFNLMKSF-GVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
L++ C I+ +D+ + L ++ D+ Y LLSN+YA G W + +LR MK L
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLY-----EHMV 755
K PGYS I + F AG+ + Q+ EIY+ L L EH+V
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVV 785
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 154/599 (25%), Positives = 291/599 (48%), Gaps = 17/599 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
+++ +IK G D ++ T+L+ + + + A + RD++ ++ L+S
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVS 117
+ AL++F + G+ PDA T S+V+ C G L+ VHG + F L +
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEF-DKSKEVFVEMRSLGLE 176
+ Y+K G+++S+E F + V++TAM+ Y GEF +K+ F EM G+E
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN-RGEFSEKALRSFSEMIKSGIE 300
Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
N +L +VL G ++EG+ +HGF V+ L L+ A++ LY CG+ D
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE-LDPNYESLSLALVELYAECGKLSDCE 359
Query: 234 KMFDEITEPDVVSWSERIAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
+ +++ ++V+W+ I+ A G ++A GLF+ + + + +T+ + +S+
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
++ GKQI + + + N+LI MY K G V+ A ++F+ + + V+WNSM+
Sbjct: 420 LVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
G+S+NG +A+ +F +M L N T ++++A S+ SL++ VH +I SG L
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LK 537
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIW 470
D + LI Y KC LN ++ V + ++ V +++ + A+ + +
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597
Query: 471 GSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIE 530
S + N F VL AC +E+GK L + + ID+ + G ++
Sbjct: 598 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLK 657
Query: 531 DAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
+A R +++ + A W +++ G H + + N +S + D+ Y +L++
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD--IVTDDTGYYTLLSN 714
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 51/352 (14%)
Query: 392 SLKQAMQVHSHIIKSGFLLDDSM-ISCLITTYGKCNALNESKRVLSEIDKKNAVHINALA 450
SL+ Q+H+H++ +G L D + ++ LI +Y + + S+ V ++ L
Sbjct: 13 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 72
Query: 451 SVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTD-LEQGKAIHCLALKARY 509
V+ A++LY + +++ F VL+ACA + L G +H +K
Sbjct: 73 KCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 510 DQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNK 569
D D +E++++ MY + G + DA++ F + L W+ ++ ++G + +F
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 570 MSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ-------------LE 616
M GV+PD +T ++V+ C G +R AR+ +HG I + L
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARS-------VHGQITRKMFDLDETLCNSLLT 245
Query: 617 HYACIVDLL------------------------GRVGLLEGAKMTIDQM---PIPPDAHI 649
Y+ DLL R E A + +M I P+
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVT 305
Query: 650 WQSLLSACTIYGNIDLG--LLAGSKLLELQPDNESTYVLLSNLYASAGMWND 699
S+LS+C + G I G + + EL P+ ES + L LYA G +D
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 208/742 (28%), Positives = 379/742 (51%), Gaps = 41/742 (5%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
D ++ L++ + KF + + RD++ +N ++ A+ L
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 74 YQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVS-A 132
GL P+ T L + G + +G ++++A + S +
Sbjct: 239 SSGLNPNEITLRLLARISGDDSD--------------------AGQVKSFANGNDASSVS 278
Query: 133 EMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDV 192
E+ FR+ + Y+ +G++ + F +M +E ++ + +L + V
Sbjct: 279 EIIFRN----------KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 193 KE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSE 249
G+Q+H +K+G + ++N+++N+Y + + A +FD ++E D++SW+
Sbjct: 329 DSLALGQQVHCMALKLGL--DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 250 RIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG-ERILRAGKQIQAFCYKV 305
IA VEA LF L + ++YTM ++L + L KQ+ K+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 306 GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMF 365
+ + ALI Y + + +A +F+ F D V+WN+M+AGY+++ ++ L +F
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 366 CHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
M + + +T+A++ + ++ Q QVH++ IKSG+ LD + S ++ Y KC
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKC 565
Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
++ ++ I + V + S + A ++ + + T + +
Sbjct: 566 GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625
Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
KA + +T LEQG+ IH ALK D FV ++++DMY KCG+I+DA F++I ++
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT 685
Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
WNAM++G AQHG E LF +M G+KPD++T++ VL++C H+GLV EA ++ M
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
+G+ P++EHY+C+ D LGR GL++ A+ I+ M + A ++++LL+AC + G+ +
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
G +KLLEL+P + S YVLLSN+YA+A W+++ R MK + K+PG+SWI V
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Query: 726 YTHHFYAGDSSHSQSKEIYKEL 747
H F D S+ Q++ IY+++
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKV 887
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 183/696 (26%), Positives = 316/696 (45%), Gaps = 68/696 (9%)
Query: 17 LSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQS-----GPALKLFDR 71
L LIS ++K A R +RD++++N++++ A+ + A LF
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 72 LRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE 128
LR + T S ++K C G + +E HG K+G ++ + Y K G+
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 129 IVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA 188
+ ++ F + D V + M+ Y+ G +++ ++ S GL NE +L +
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI 255
Query: 189 SFDVKEGEQIHGF--GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVS 246
S D + Q+ F G +S + N ++ Y+ GQ +K F ++ E DV
Sbjct: 256 SGDDSDAGQVKSFANGNDASSVSEII--FRNKGLSEYLHSGQYSALLKCFADMVESDV-- 311
Query: 247 WSERIAAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG 306
CD V T I +L++ L G+Q+ K+G
Sbjct: 312 -------ECDQV-------------------TFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 307 FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFC 366
++++ N+LI+MY K + AR++FD + +D +SWNS+IAG ++NG +A+ +F
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 367 HMLEFSLIPNGYTMASILEAVSN-SKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
+L L P+ YTM S+L+A S+ + L + QVH H IK + D + + LI Y +
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
+ E++ +L E + V NA+ + + + L+L+ + + T + V
Sbjct: 466 RCMKEAE-ILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
K C + + QGK +H A+K+ YD D++V S ++DMY KCG + A+ AF I
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITY--LAVLTSCCHAGLVREARTY-- 601
W M+ G ++G ++F++M GV PDE T LA +SC A + + R
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA--LEQGRQIHA 642
Query: 602 ----LSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAK---MTIDQMPIPPDAHIWQSLL 654
L+C +D P + +VD+ + G ++ A I+ M I W ++L
Sbjct: 643 NALKLNCTND-----PFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA----WNAML 691
Query: 655 SACTIY--GNIDLGLLAGSKLLELQPDNESTYVLLS 688
+ G L L K L ++PD + +LS
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 249/493 (50%), Gaps = 38/493 (7%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
Q++ + +K G L +S +LI+ + K F A R +FD + RD+I++N++I+G+A+
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA-RTVFDNMSERDLISWNSVIAGIAQN 394
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE----NEIVHGVCLKLGFSSRVYL 115
A+ LF +L GL+PD +T +S++KA SL E ++ VH +K+ S ++
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 116 VSGFIENYAKSGEIVSAEMCF-RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
+ I+ Y+++ + AE+ F R DL VA+ AM+ GY + + K+ ++F M G
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNFDL--VAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 175 LELNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
++F+L V G F + +G+Q+H + +K G+ + +++ I+++YV+CG
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW--VSSGILDMYVKCGDMSA 570
Query: 232 AVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A FD I PD V+W+ I+ + E AF +F +R +E+T+ L +
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
L G+QI A K+ +G +L+ MY KCG ++DA +F + + +WN+M
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQ-VHSHIIKSG 407
+ G +++G + L +F M + P+ T +L A S+S + +A + + S G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
+ SCL G+ + +++ N + S+ + AS +YR
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAE--------------NLIESMSMEASA-----SMYR 791
Query: 468 TIWGSCREVNGST 480
T+ +CR V G T
Sbjct: 792 TLLAACR-VQGDT 803
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 485 LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSL 544
L+ +DL GK H L + + F+ + +I MY KCG++ A+R F K+ L
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 545 AGWNAMMMGYAQHG-CYHEVSN----LFNKMSKFGVKPDEITYLAVLTSCCHAGLVREAR 599
WN+++ YAQ C E LF + + V +T +L C H+G V +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 600 TYLSCMSDLHGLIPQLEHYACIVDLLG-------------RVGLLEGAKMTIDQMPIPPD 646
++ HG YAC + L G + G ++ K+ ++MP D
Sbjct: 166 SF-------HG-------YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RD 210
Query: 647 AHIWQSLLSA 656
+W +L A
Sbjct: 211 VVLWNLMLKA 220
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/644 (31%), Positives = 335/644 (52%), Gaps = 17/644 (2%)
Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLEL- 177
I + K+G++ SA F D V +T ++ Y N FD++ ++F +M RS L
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 178 NEFSLTAVLGASFDVKEGE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AV 233
+ + T +L D Q+H F VK+GF + ++N ++ Y ++LD A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV-RRLDLAC 204
Query: 234 KMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
+F+EI E D V+++ I DG+ E+ LF +R + Q +++T +L +V G
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
G+Q+ A GF S+GN ++ Y K +V + R +FD + D VS+N +I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
YS+ + +L F M + A++L +N SL+ Q+H +
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---LAT 381
Query: 411 DDSMI---SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
DS++ + L+ Y KC E++ + + ++ V AL S V H L+L+
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
+ GS + STF+ VLKA A+ L GK +H +++ +++F S ++DMY KCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 528 TIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
+I+DA + F ++ + WNA++ +A +G F KM + G++PD ++ L VLT
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
+C H G V + Y MS ++G+ P+ +HYAC++DLLGR G A+ +D+MP PD
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621
Query: 648 HIWQSLLSACTIYGNIDLGLLAGSKLLELQP-DNESTYVLLSNLYASAGMWNDVGKLRKE 706
+W S+L+AC I+ N L A KL ++ + + YV +SN+YA+AG W V ++K
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKA 681
Query: 707 MKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKL 750
M+E+ + K P YSW+ V H F + D +H EI +++ +L
Sbjct: 682 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 277/592 (46%), Gaps = 50/592 (8%)
Query: 12 HLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARFCQSGPALKLFD 70
H + + + T+IS K D A R LFD +R ++T+ L+ AR A KLF
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSA-RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134
Query: 71 RLRYQG--LRPDAFTFSSLVKACG-SLQENEI--VHGVCLKLGFSSRVYLVSG--FIENY 123
++ PD TF++L+ C ++ +N + VH +KLGF + +L +++Y
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
+ + A + F + + D+V + ++ GY +G + +S +F++MR G + ++F+ +
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 184 AVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
VL A D G+Q+H V GF + N I++ Y + + L+ +FDE+
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDAS--VGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 241 EPDVVSWSERIA--AACDGVEA-FGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQ 297
E D VS++ I+ + D EA F++++ F + +LS L+ G+Q
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 298 IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGF 357
+ ++ +GN+L+ MY KC +A IF L + +VSW ++I+GY + G
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 358 FNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISC 417
L +F M +L + T A++L+A ++ SL Q+H+ II+SG L + S
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 418 LITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN 477
L+ Y KC ++ ++ +V E+ +NAV NAL S A+ + + S + +
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 478 GSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFR 537
+ VL AC+ +EQG Y Q A+ +Y I K+ +
Sbjct: 553 SVSILGVLTACSHCGFVEQG---------TEYFQ------AMSPIY----GITPKKKHY- 592
Query: 538 KICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
C L G N G + E L ++M +PDEI + +VL +C
Sbjct: 593 -ACMLDLLGRN---------GRFAEAEKLMDEMP---FEPDEIMWSSVLNAC 631
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 221/452 (48%), Gaps = 18/452 (3%)
Query: 1 QIYSLLIKNGHHLDPIL--STTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR 58
Q+++ +K G +P L S L+ + + A + +D +T+N LI+G +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 59 FCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE---NEIVHGVCLKLGFSSRVYL 115
++ LF ++R G +P FTFS ++KA L + + +H + + GFS +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
+ ++ Y+K ++ M F + +LD V+Y ++ Y +++ S F EM+ +G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 176 ELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
+ F +L + ++ G Q+H + S + H+ N+++++Y +C +A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL--HVGNSLVDMYAKCEMFEEA 405
Query: 233 VKMFDEITEPDVVSWSERIAAACD-GVEAFG--LFKDLRFNDFQINEYTMINLLSSVGGE 289
+F + + VSW+ I+ G+ G LF +R ++ + ++ T +L +
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
L GKQ+ AF + G +E V G+ L+ MY KCG + DA +F+ + +++VSWN++I
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525
Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQA---MQVHSHIIKS 406
+ +++NG A+ F M+E L P+ ++ +L A S+ ++Q Q S I
Sbjct: 526 SAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY-- 583
Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
G +C++ G+ E+++++ E+
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 170/361 (47%), Gaps = 15/361 (4%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNR-DIITYNALISGLARF 59
Q+++L + G D + ++ ++K D R LFD D ++YN +IS ++
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKH-DRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLV 116
Q +L F ++ G F F++++ SLQ +H L S +++
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
+ ++ YAK AE+ F+ V++TA++ GYV G ++F +MR L
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 177 LNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
++ + VL AS G+Q+H F ++ G L V + + ++++Y +CG DAV
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS--GSGLVDMYAKCGSIKDAV 507
Query: 234 KMFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
++F+E+ + + VSW+ I+A DG A G F + + Q + +++ +L++
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 291 ILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSM 348
+ G + QA G ++ + G+ G+ +A + D + F+ D + W+S+
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 349 I 349
+
Sbjct: 628 L 628
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 164/363 (45%), Gaps = 6/363 (1%)
Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS-- 372
N +IS + K G V+ AR +FD + + V+W ++ Y+ N F++A +F M S
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD--SMISCLITTYGKCNALNE 430
+P+ T ++L +++ QVH+ +K GF + ++ + L+ +Y + L+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 431 SKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAA 490
+ + EI +K++V N L + + E++ L+ + S + + TFS VLKA
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 491 MTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAM 550
+ D G+ +H L++ + +D V + ++D Y K + + + F ++ +N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 551 MMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHG 610
+ Y+Q Y + F +M G + +L+ + ++ R L C + L
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHCQALLAT 381
Query: 611 LIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAG 670
L +VD+ + + E A++ +P W +L+S G GL
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISGYVQKGLHGAGLKLF 440
Query: 671 SKL 673
+K+
Sbjct: 441 TKM 443
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 329 bits (843), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 210/674 (31%), Positives = 340/674 (50%), Gaps = 18/674 (2%)
Query: 86 SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNV 145
+L + C +LQ + +H + V + + + Y G + A F + D
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 146 AYTAMVCGYVWNGEFDKSKEVF----VEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGF 201
A+ M+ GY G S EV + M S GL + + +VL A V +G +IH
Sbjct: 119 AWNLMISGY---GRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 202 GVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAAC---DGV 258
+K GF+ V ++ ++++LY R +A +FDE+ D+ SW+ I+ C +
Sbjct: 176 ALKFGFMWDV--YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 259 EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALI 318
EA L LR D T+++LLS+ G I ++ K G + + N LI
Sbjct: 234 EALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 319 SMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGY 378
+Y + G++ D + +FD + +D +SWNS+I Y N +A+ +F M + P+
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 379 TMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRVLSE 437
T+ S+ +S ++ V ++ G+ L+D I + ++ Y K ++ ++ V +
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCR-EVNGSTFSIVLKACAAMTDLEQ 496
+ + + N + S +EA+E+Y + N T+ VL AC+ L Q
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
G +H LK D+FV +++ DMY KCG +EDA F +I R + WN ++ +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
HG + LF +M GVKPD IT++ +L++C H+GLV E + M +G+ P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
HY C+VD+ GR G LE A I M + PDA IW +LLSAC ++GN+DLG +A L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
+P++ +VLLSN+YASAG W V ++R K L K PG+S + V FY G+ +
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709
Query: 737 HSQSKEIYKELIKL 750
H +E+Y+EL L
Sbjct: 710 HPMYEEMYRELTAL 723
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/568 (28%), Positives = 295/568 (51%), Gaps = 26/568 (4%)
Query: 36 RFLFD-TQNRDIITYNALISGLARFCQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGS 93
R FD QNRD+ +N +ISG R S ++ F + GL PD TF S++KAC +
Sbjct: 106 RHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT 165
Query: 94 LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
+ + +H + LK GF VY+ + I Y++ + +A + F + D ++ AM+ G
Sbjct: 166 VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225
Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCN 213
Y +G ++ + +R++ + SL + + D G IH + +K G S +
Sbjct: 226 YCQSGNAKEALTLSNGLRAMD-SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL-- 282
Query: 214 HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFN 270
++N +++LY G+ D K+FD + D++SW+ I A + A LF+++R +
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 271 DFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVND 329
Q + T+I+L S + +RA + +Q F + G F+E ++IGNA++ MY K G V+
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 330 ARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI-PNGYTMASILEAVS 388
AR++F++L D +SWN++I+GY++NGF ++A++M+ M E I N T S+L A S
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
+ +L+Q M++H ++K+G LD +++ L YGKC L ++ + +I + N+V N
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
L + + +A+ L++ + + + TF +L AC+ +++G+ C + +
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ--WCFEM-MQ 579
Query: 509 YDQDIFVE----SAVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQHGCYHEV 563
D I ++DMY + G +E A + + + A W A++ HG
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD-- 637
Query: 564 SNLFNKMSK---FGVKPDEITYLAVLTS 588
K++ F V+P+ + Y +L++
Sbjct: 638 ---LGKIASEHLFEVEPEHVGYHVLLSN 662
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 226/457 (49%), Gaps = 32/457 (7%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
+I+ L +K G D ++ +LI ++++ A R LFD RD+ ++NA+ISG +
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA-RILFDEMPVRDMGSWNAMISG---Y 226
Query: 60 CQSG---PALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRV 113
CQSG AL L + LR D+ T SL+ AC G +H +K G S +
Sbjct: 227 CQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL 173
++ + I+ YA+ G + + F D +++ +++ Y N + ++ +F EMR
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 174 GLE---LNEFSLTAVLGASFDVKEGEQIHGFGVKVG-FLSGVCNHLNNAIMNLYVRCGQK 229
++ L SL ++L D++ + GF ++ G FL + + NA++ +Y + G
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT--IGNAVVVMYAKLGLV 400
Query: 230 LDAVKMFDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLL 283
A +F+ + DV+SW+ I+ A + +E + + ++ + N+ T +++L
Sbjct: 401 DSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE--GEIAANQGTWVSVL 458
Query: 284 SSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSV 343
+ LR G ++ K G V + +L MYGKCG++ DA S+F + +SV
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
WN++IA + +G +A+ +F ML+ + P+ T ++L A S+S + + Q +
Sbjct: 519 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QWCFEM 577
Query: 404 IKSGFLLDDSM--ISCLITTYGKCNALNESKRVLSEI 438
+++ + + S+ C++ YG+ L + + + +
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 188/419 (44%), Gaps = 35/419 (8%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
I+S IK+G + +S LI + +F R + RD+I++N++I Q
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 62 SGPALKLFDRLRYQGLRPDAFT---FSSLVKACGSLQENEIVHGVCLKLG-FSSRVYLVS 117
A+ LF +R ++PD T +S++ G ++ V G L+ G F + + +
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLG-LE 176
+ YAK G + SA F + D +++ ++ GY NG ++ E++ M G +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
N+ + +VL A + +++G ++HG +K G V + ++ ++Y +CG+ DA+
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV--FVVTSLADMYGKCGRLEDAL 506
Query: 234 KMFDEITEPDVVSWSERIAAACDGVEAFG-----LFKDLRFNDFQINEYTMINLLSSVGG 288
+F +I + V W+ I AC G G LFK++ + + T + LLS+
Sbjct: 507 SLFYQIPRVNSVPWNTLI--ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 289 ERILRAGKQIQAFCYKV-----GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DS 342
++ G+ +C+++ G + ++ MYG+ GQ+ A + + D+
Sbjct: 565 SGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFS--------LIPNGYTMASILEAVSNSKSL 393
W ++++ +G + H+ E L+ N Y A E V +S+
Sbjct: 621 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 328 bits (842), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 297/523 (56%), Gaps = 10/523 (1%)
Query: 232 AVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A ++FD++ P + W+ I +A ++ +++ + +T +LL + G
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS--VSWN 346
L+ G+ + A +++GF V + N LI++Y KC ++ AR++F+ L + VSW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
++++ Y++NG +AL++F M + + P+ + S+L A + + LKQ +H+ ++K
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 407 GFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
G ++ ++ L T Y KC + +K + ++ N + NA+ S EA++++
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 467 RTIWGSCREVNGSTFSIV--LKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYC 524
+ ++V T SI + ACA + LEQ ++++ ++ Y D+F+ SA+IDM+
Sbjct: 312 HEMIN--KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 525 KCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLA 584
KCG++E A+ F + + W+AM++GY HG E +L+ M + GV P+++T+L
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 585 VLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIP 644
+L +C H+G+VRE + + M+D H + PQ +HYAC++DLLGR G L+ A I MP+
Sbjct: 430 LLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLR 704
P +W +LLSAC + +++LG A +L + P N YV LSNLYA+A +W+ V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 705 KEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
MKEK L K+ G SW+ V G F GD SH + +EI +++
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQV 591
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 221/447 (49%), Gaps = 15/447 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI++ L+ G L T LI + F D A + D I +NA+I G +R
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS---LQENEIVHGVCLKLGFSSRVYLVS 117
AL ++ ++ + PD+FTF L+KAC LQ VH +LGF + V++ +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN---VAYTAMVCGYVWNGEFDKSKEVFVEMRSLG 174
G I YAK + SA F + L L V++TA+V Y NGE ++ E+F +MR +
Sbjct: 159 GLIALYAKCRRLGSARTVF-EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 175 LELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD 231
++ + +L +VL A D+K+G IH VK+G + L ++ +Y +CGQ
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL--EIEPDLLISLNTMYAKCGQVAT 275
Query: 232 AVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A +FD++ P+++ W+ I+ A +G EA +F ++ D + + ++ + +S+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSM 348
L + + + + + + V I +ALI M+ KCG V AR +FD + +D V W++M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 349 IAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
I GY +G +A+ ++ M + PN T +L A ++S +++ + +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Query: 409 LLDDSMISCLITTYGKCNALNESKRVL 435
+C+I G+ L+++ V+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVI 482
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 231/491 (47%), Gaps = 12/491 (2%)
Query: 76 GLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMC 135
G+ D+F ++SL+ + + + +H L LG +L++ I + G+I A
Sbjct: 17 GIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQV 75
Query: 136 FRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE- 194
F D + A++ GY N F + ++ M+ + + F+ +L A +
Sbjct: 76 FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 195 --GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD--VVSWSER 250
G +H ++GF + V + N ++ LY +C + A +F+ + P+ +VSW+
Sbjct: 136 QMGRFVHAQVFRLGFDADV--FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 251 IAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
++A + +EA +F +R D + + ++++L++ + L+ G+ I A K+G
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
+ +L +MY KCGQV A+ +FD + + + WN+MI+GY++NG+ +A+DMF
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
M+ + P+ ++ S + A + SL+QA ++ ++ +S + D + S LI + KC +
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
+ ++ V ++ V +A+ EA+ LYR + N TF +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAG 546
C + +G + + + VID+ + G ++ A + + + +
Sbjct: 434 CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493
Query: 547 WNAMMMGYAQH 557
W A++ +H
Sbjct: 494 WGALLSACKKH 504
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 8/371 (2%)
Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
KQI A +G + LI G + AR +FD L WN++I GYS N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI 415
F AL M+ +M + P+ +T +L+A S L+ VH+ + + GF D +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 416 SCLITTYGKCNALNESKRVLS--EIDKKNAVHINALASVLVYASCHAEALELYRTIWGSC 473
+ LI Y KC L ++ V + ++ V A+ S EALE++ +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 474 REVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
+ + VL A + DL+QG++IH +K + + + ++ MY KCG + AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
F K+ +L WNAM+ GYA++G E ++F++M V+PD I+ + +++C G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 594 LVREARTYLSCM--SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQ 651
+ +AR+ + SD + + ++D+ + G +EGA++ D+ + D +W
Sbjct: 338 SLEQARSMYEYVGRSDYRD---DVFISSALIDMFAKCGSVEGARLVFDRT-LDRDVVVWS 393
Query: 652 SLLSACTIYGN 662
+++ ++G
Sbjct: 394 AMIVGYGLHGR 404
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 492 TDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMM 551
T Q K IH L F+ + +I G I A++ F + R + WNA++
Sbjct: 32 THKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAII 91
Query: 552 MGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGL 611
GY+++ + + +++ M V PD T+ +L +C +GL ++L +H
Sbjct: 92 RGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC--SGL-----SHLQMGRFVHAQ 144
Query: 612 IPQLEHYACI------VDLLGRVGLLEGAKMTIDQMPIPPDAHI-WQSLLSACTIYGNI- 663
+ +L A + + L + L A+ + +P+P + W +++SA G
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 664 -DLGLLAGSKLLELQPD 679
L + + + ++++PD
Sbjct: 205 EALEIFSQMRKMDVKPD 221
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 268/509 (52%), Gaps = 32/509 (6%)
Query: 278 TMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYL 337
T NL+ R L GK++ GF+ + I N L+ MY KCG + DAR +FD +
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE-----FSLIPNGY----------TMAS 382
+D SWN M+ GY+E G +A +F M E ++ + GY + S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 383 ILEAVSNS-----------------KSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKC 425
+++ V NS K +++ ++H HI+++G D+ + S L+ YGKC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 426 NALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVL 485
++E++ + +I +K+ V ++ +S E L+ + GSC N TF+ VL
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
ACA +T E GK +H + +D F S+++DMY KCG IE AK + L
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
W +++ G AQ+G E F+ + K G KPD +T++ VL++C HAGLV + + +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
++ H L +HY C+VDLL R G E K I +MP+ P +W S+L C+ YGNIDL
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGG 725
A +L +++P+N TYV ++N+YA+AG W + GK+RK M+E + K PG SW +
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566
Query: 726 YTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
H F A D+SH +I + L +L + M
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKM 595
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 209/438 (47%), Gaps = 27/438 (6%)
Query: 31 FRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL----KLFDRLRYQGLRPDAFTFSS 86
R A + L + TY LI + C AL K+ + +R G P ++
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLI----QVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 87 LVK---ACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
L++ CGSL + V S +V+G YA+ G + A F + + D
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNG----YAEVGLLEEARKLFDEMTEKD 181
Query: 144 NVAYTAMVCGYVWNGEFDKSKEVFVEM-RSLGLELNEFSLTAVLGASFD---VKEGEQIH 199
+ ++TAMV GYV + +++ ++ M R N F+++ + A+ ++ G++IH
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWS---ERIAAACD 256
G V+ G S L +++M++Y +CG +A +FD+I E DVVSW+ +R +
Sbjct: 242 GHIVRAGLDSDEV--LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNA 316
E F LF +L + + NEYT +L++ GKQ+ + +VGF ++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPN 376
L+ MY KCG + A+ + D D VSW S+I G ++NG ++AL F +L+ P+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 377 GYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS-MISCLITTYGKCNALNESKRVL 435
T ++L A +++ +++ ++ I + L S +CL+ + + K V+
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 436 SEIDKKNAVHINALASVL 453
SE+ K + + ASVL
Sbjct: 480 SEMPMKPSKFL--WASVL 495
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 204/455 (44%), Gaps = 42/455 (9%)
Query: 181 SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEIT 240
+L V + ++EG+++H GF+ G+ + N ++ +Y +CG +DA K+FDE+
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV--IWNRLLRMYAKCGSLVDARKVFDEMP 147
Query: 241 EPDVVSWSERIAAACD-GV--EAFGLFKDL------------------------------ 267
D+ SW+ + + G+ EA LF ++
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207
Query: 268 --RFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCG 325
R + + N +T+ +++ + +R GK+I + G + ++L+ MYGKCG
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 326 QVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILE 385
+++AR+IFD ++ KD VSW SMI Y ++ + + +F ++ PN YT A +L
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327
Query: 386 AVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVH 445
A ++ + + QVH ++ + GF S L+ Y KC + +K V+ K + V
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVS 387
Query: 446 INALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLA 504
+L EAL+ + + S + + TF VL AC +E+G + + +
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSIT 447
Query: 505 LKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKI-CRDSLAGWNAMMMGYAQHGCYHEV 563
K R + ++D+ + G E K ++ + S W +++ G + +G
Sbjct: 448 EKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
Query: 564 SNLFNKMSKFGVKPD-EITYLAVLTSCCHAGLVRE 597
++ F ++P+ +TY+ + AG E
Sbjct: 508 EEAAQEL--FKIEPENPVTYVTMANIYAAAGKWEE 540
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 167/374 (44%), Gaps = 45/374 (12%)
Query: 358 FNQALDMFC---------HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
F +A+D+ C +L + P T ++++ S +++L++ +VH HI SGF
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 409 LLDDSMISCLITTYGKCNA-------------------------------LNESKRVLSE 437
+ + + L+ Y KC + L E++++ E
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWG-SCREVNGSTFSIVLKACAAMTDLEQ 496
+ +K++ A+ + V EAL LY + N T SI + A AA+ + +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
GK IH ++A D D + S+++DMY KCG I++A+ F KI + W +M+ Y +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
+ E +LF+++ +P+E T+ VL +C + M+ + G P
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSF 355
Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLE- 675
+ +VD+ + G +E AK +D P PD W SL+ C G D L LL+
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 676 -LQPDNESTYVLLS 688
+PD+ + +LS
Sbjct: 415 GTKPDHVTFVNVLS 428
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 170/371 (45%), Gaps = 27/371 (7%)
Query: 36 RFLFDTQN-RDIITYNALISGLARFCQSGPALKLFDRL-RYQGLRPDAFTFS---SLVKA 90
R LFD +D ++ A+++G + Q AL L+ + R RP+ FT S + A
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAA 230
Query: 91 CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAM 150
++ + +HG ++ G S L S ++ Y K G I A F ++ D V++T+M
Sbjct: 231 VKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSM 290
Query: 151 VCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGF 207
+ Y + + + +F E+ NE++ VL A D+ G+Q+HG+ +VGF
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 208 LSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLF 264
+ +++++++Y +CG A + D +PD+VSW+ I A +G EA F
Sbjct: 351 --DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 265 KDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN----ALISM 320
L + + + T +N+LS+ ++ G + F Y + +S + L+ +
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE---FFYSITEKHRLSHTSDHYTCLVDL 465
Query: 321 YGKCGQVNDARSIFDYLIFKDS-VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG-- 377
+ G+ +S+ + K S W S++ G S G + A + + F + P
Sbjct: 466 LARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL--FKIEPENPV 523
Query: 378 --YTMASILEA 386
TMA+I A
Sbjct: 524 TYVTMANIYAA 534
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
+I+ +++ G D +L ++L+ + K A R +FD +D++++ ++I +
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEA-RNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
+ LF L RP+ +TF+ ++ AC L E+ VHG ++GF +
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
S ++ Y K G I SA+ C D V++T+++ G NG+ D++ + F + G +
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417
Query: 177 LNEFSLTAVLGA 188
+ + VL A
Sbjct: 418 PDHVTFVNVLSA 429
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ + + G S++L+ +TK + A + D++++ +LI G A+
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
Q ALK FD L G +PD TF +++ AC
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 210/719 (29%), Positives = 354/719 (49%), Gaps = 58/719 (8%)
Query: 27 KFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSS 86
K D A RD++++N +IS L R AL ++ R+ G P FT +S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 87 LVKACGSLQENEI---VHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLD 143
++ AC + + HGV +K G +++ + + YAK G IV + + L
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 144 N-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS------------F 190
N V+YTA++ G + ++ ++F M G++++ L+ +L S +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
+ G+QIH +++GF + HLNN+++ +Y + A +F E+ E +VVSW+
Sbjct: 264 GNELGKQIHCLALRLGFGGDL--HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 251 IAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
I ++ +R + FQ NE T I++L + C++
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA----------------CFR--- 362
Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCH 367
G V R IF + +WN+M++GYS + +A+ F
Sbjct: 363 ----------------SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 368 MLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
M +L P+ T++ IL + + + L+ Q+H +I++ + ++S LI Y +C
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 428 LNESKRVLSE-IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREV-NGSTFSIVL 485
+ S+ + + I++ + N++ S + +AL L+R + + N ++F+ VL
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 486 KACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLA 545
+C+ + L G+ H L +K+ Y D FVE+A+ DMYCKCG I+ A++ F + R +
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586
Query: 546 GWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCM 605
WN M+ GY +G E L+ KM G KPD IT+++VLT+C H+GLV LS M
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 606 SDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
+HG+ P+L+HY CIVD LGR G LE A+ + P + +W+ LLS+C ++G++ L
Sbjct: 647 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 706
Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVG 724
KL+ L P + + YVLLSN Y+S W+D L+ M + + K PG SW G
Sbjct: 707 ARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYG 765
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/615 (21%), Positives = 264/615 (42%), Gaps = 106/615 (17%)
Query: 98 EIVHGVCLKLGFSSRVYLVSGFIENYAKSGE-----IVSAEMCFRDCL------------ 140
+++HG +++G S YL + ++ Y + G+ V EM RD
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 141 --------------DLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
+ D V++ M+ V G +K+ V+ M G + F+L +VL
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 187 GASFDVKEG---EQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLD-AVKMFDEITEP 242
A V +G + HG VK G + + NA++++Y +CG +D V++F+ +++P
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNI--FVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 243 DVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLS------------SVG 287
+ VS++ I A +EA +F+ + Q++ + N+LS +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
G + GKQI ++GF + + N+L+ +Y K +N A IF + + VSWN
Sbjct: 264 GNEL---GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
MI G+ + +++++ M + PN T S+L A S ++
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG----------- 369
Query: 408 FLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYR 467
+R+ S I + + NA+ S + EA+ +R
Sbjct: 370 ------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 468 TIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
+ + + +T S++L +CA + LE GK IH + ++ ++ + S +I +Y +C
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECE 465
Query: 528 TIEDAKRAFRKICRD-SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK-PDEITYLAV 585
+E ++ F + +A WN+M+ G+ + + LF +M + V P+E ++ V
Sbjct: 466 KMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATV 525
Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYA------CIVDLLGRVGLLEGAKMTID 639
L+SC + R + HGL+ + + + + D+ + G ++ A+ D
Sbjct: 526 LSSCSRLCSLLHGRQF-------HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 640 QMPIPPDAHIWQSLL 654
+ + + IW ++
Sbjct: 579 AV-LRKNTVIWNEMI 592
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 192/427 (44%), Gaps = 50/427 (11%)
Query: 275 NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIF 334
N+Y + +LL ER +GK I F ++G + N L+ +Y +CG + AR +F
Sbjct: 6 NKY-LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVF 64
Query: 335 D------------YLIFK-------------------DSVSWNSMIAGYSENGFFNQALD 363
D +L F+ D VSWN+MI+ GF +AL
Sbjct: 65 DEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALV 124
Query: 364 MFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
++ M+ +P+ +T+AS+L A S M+ H +K+G + + + L++ Y
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 424 KCN-ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFS 482
KC ++ RV + + N V A+ L + EA++++R + +V+ S
Sbjct: 185 KCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLS 244
Query: 483 IVL------KACAAMTDL---EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAK 533
+L + C +++++ E GK IHCLAL+ + D+ + ++++++Y K + A+
Sbjct: 245 NILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAE 304
Query: 534 RAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAG 593
F ++ ++ WN M++G+ Q + +M G +P+E+T ++VL +C +G
Sbjct: 305 LIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364
Query: 594 LVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMP---IPPDAHIW 650
V R S + P + + ++ E A QM + PD
Sbjct: 365 DVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419
Query: 651 QSLLSAC 657
+LS+C
Sbjct: 420 SVILSSC 426
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 207/454 (45%), Gaps = 47/454 (10%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
QI+ L ++ G D L+ +L+ + K D A + +++++N +I G +
Sbjct: 270 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 329
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFI 120
+S +++ R+R G +P+ T S++ AC
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------------------- 360
Query: 121 ENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEF 180
+SG++ + F A+ AM+ GY ++++ F +M+ L+ ++
Sbjct: 361 ---FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 181 SLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFD 237
+L+ +L + ++ G+QIHG ++ +H+ + ++ +Y C + + +FD
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTEISKN--SHIVSGLIAVYSECEKMEISECIFD 475
Query: 238 E-ITEPDVVSWSERIAAACDGV---EAFGLFKDLRFNDFQI---NEYTMINLLSSVGGER 290
+ I E D+ W+ I+ + +A LF+ R + + NE + +LSS
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFR--RMHQTAVLCPNETSFATVLSSCSRLC 533
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
L G+Q K G++ + AL MY KCG+++ AR FD ++ K++V WN MI
Sbjct: 534 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIK-SGFL 409
GY NG ++A+ ++ M+ P+G T S+L A S+S ++ +++ S + + G
Sbjct: 594 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIE 653
Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNA 443
+ C++ G+ L +++++ K++
Sbjct: 654 PELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 687
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 199/468 (42%), Gaps = 92/468 (19%)
Query: 195 GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAA 254
G+ IHGF V++G S +L N +++LY+ CG A K+FDE++ DV SW+ +
Sbjct: 25 GKVIHGFIVRMGMKSDT--YLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 255 C------------DGV----------------------EAFGLFKDLRFNDFQINEYTMI 280
C DG+ +A ++K + + F + +T+
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 281 NLLSSVGGERILRA--GKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVND-ARSIFDYL 337
++LS+ ++L G + K G + + +GNAL+SMY KCG + D +F+ L
Sbjct: 143 SVLSAC--SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 338 IFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASIL---------EAVS 388
+ VS+ ++I G + +A+ MF M E + + +++IL +++S
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 389 NSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINA 448
+ Q+H ++ GF D + + L+ Y K +N ++ + +E+ + N V N
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 449 LASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKAR 508
+ +++E + S + N T VL AC D+E G
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG----------- 369
Query: 509 YDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFN 568
+R F I + S++ WNAM+ GY+ + Y E + F
Sbjct: 370 ------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 569 KMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
+M +KPD+ T +L+SC +L +HG++ + E
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARL-------RFLEGGKQIHGVVIRTE 446
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 201/675 (29%), Positives = 338/675 (50%), Gaps = 19/675 (2%)
Query: 80 DAFTFSSLVKACGSLQENE-----IVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEM 134
D+ + ++++ C +Q+N+ +H LK G ++ + + Y K+G A
Sbjct: 48 DSHAYGAMLRRC--IQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 135 CFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE 194
F + + +NV++ + GY ++ + G ELN T+ L + +
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQDPIG----LYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 195 GE---QIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI 251
E +H VK+G+ S + A++N Y CG A +F+ I D+V W+ +
Sbjct: 162 AEICPWLHSPIVKLGYDSNA--FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 252 AAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
+ + ++ L +R F N YT L + G K + K ++
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
+G L+ +Y + G ++DA +F+ + D V W+ MIA + +NGF N+A+D+F M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
E ++PN +T++SIL + K Q+H ++K GF LD + + LI Y KC +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
+ + ++ +E+ KN V N + +A ++R + V TFS L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWN 548
A++ ++ G +H LA+K + + V +++IDMY KCG I+ A+ F ++ +A WN
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWN 519
Query: 549 AMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDL 608
A++ GY+ HG + + + M KP+ +T+L VL+ C +AGL+ + + M
Sbjct: 520 ALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD 579
Query: 609 HGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLL 668
HG+ P LEHY C+V LLGR G L+ A I+ +P P IW+++LSA N +
Sbjct: 580 HGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Query: 669 AGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTH 728
+ ++L++ P +E+TYVL+SN+YA A W +V +RK MKE + KEPG SWI G H
Sbjct: 640 SAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVH 699
Query: 729 HFYAGDSSHSQSKEI 743
+F G S H K I
Sbjct: 700 YFSVGLSDHPDMKLI 714
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 224/455 (49%), Gaps = 12/455 (2%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
++S ++K G+ + + LI+ ++ A +DI+ + ++S
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 62 SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
+LKL +R G P+ +TF + +KA G+ + VHG LK + + G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
++ Y + G++ A F + D V ++ M+ + NG +++ ++F+ MR + N
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 179 EFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
EF+L+++L K GEQ+HG VKVGF + +++NA++++Y +C + AVK+
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI--YVSNALIDVYAKCEKMDTAVKL 405
Query: 236 FDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
F E++ + VSW+ I +G +AF +F++ N + E T + L + +
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
G Q+ K + V++ N+LI MY KCG + A+S+F+ + D SWN++I+GY
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS-GFLLD 411
S +G QAL + M + PNG T +L SN+ + Q + +I+ G
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 412 DSMISCLITTYGKCNALNESKRVLSEIDKKNAVHI 446
+C++ G+ L+++ +++ I + +V I
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMI 620
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 182/366 (49%), Gaps = 23/366 (6%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
++ ++K + LDP + L+ +T+ D AF+ + D++ ++ +I ARFCQ
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI---ARFCQ 325
Query: 62 SG---PALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYL 115
+G A+ LF R+R + P+ FT SS++ C + E +HG+ +K+GF +Y+
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
+ I+ YAK ++ +A F + + V++ ++ GY GE K+ +F E +
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV 445
Query: 176 ELNEFSLTAVLG-----ASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
+ E + ++ LG AS D+ G Q+HG +K V ++N+++++Y +CG
Sbjct: 446 SVTEVTFSSALGACASLASMDL--GVQVHGLAIKTNNAKKVA--VSNSLIDMYAKCGDIK 501
Query: 231 DAVKMFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
A +F+E+ DV SW+ I+ G +A + ++ D + N T + +LS
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 288 GERILRAGKQ-IQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVS-W 345
++ G++ ++ G + ++ + G+ GQ++ A + + + ++ SV W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 346 NSMIAG 351
+M++
Sbjct: 622 RAMLSA 627
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 8/261 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++ L++K G LD +S LI + K A + + +++ +++N +I G
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLVS 117
+ G A +F + TFSS + AC SL ++ VHG+ +K + +V + +
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
I+ YAK G+I A+ F + +D ++ A++ GY +G ++ + M+ +
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 178 NEFSLTAVLGASFD---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
N + VL + + +G++ ++ + H ++ L R GQ A+K
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY-TCMVRLLGRSGQLDKAMK 607
Query: 235 MFDEIT-EPDVVSWSERIAAA 254
+ + I EP V+ W ++A+
Sbjct: 608 LIEGIPYEPSVMIWRAMLSAS 628
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 476 VNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRA 535
++ + +L+ C D KAIHC LK D+F + +++ Y K G +DA
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 536 FRKICRDSLAGWNAMMMGYA 555
F ++ + + + GYA
Sbjct: 107 FDEMPERNNVSFVTLAQGYA 126
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 215/734 (29%), Positives = 378/734 (51%), Gaps = 29/734 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
+I+ L+ + G D + T L+ + K D A R +FD + +D++T+N ++SGLA+
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA-RQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCLKLGFSSRVYLV 116
S AL LF +R + D + +L+ A L+++++ +HG+ +K GF
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFS 237
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
SG I+ Y ++ +AE F + D ++ M+ Y NG F++ E+F MR+ +
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 177 LNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
+N+ + + L A+ D+ +G IH + V+ G + V + ++M++Y +CG+ A
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV--SVATSLMSMYSKCGELEIAE 355
Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
++F I + DVVSWS IA+ A EA LF+D+ + N T+ ++L G
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 291 ILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIA 350
R GK I + K + A+ISMY KCG+ + A F+ L KD+V++N++
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 351 GYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLL 410
GY++ G N+A D++ +M + P+ TM +L+ + + V+ IIK GF
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 411 DDSMISCLITTYGKCNALNESKRVLSEID-KKNAVHINALASVLVYASCHAEALELYRTI 469
+ + LI + KC+AL + + + +K+ V N + + + EA+ +R +
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
+ N TF +++A A ++ L G ++H ++ + V ++++DMY KCG I
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655
Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
E +++ F +I + WN M+ YA HG +LF M + +KPD +++L+VL++C
Sbjct: 656 ESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
HAGLV E + M + H + ++EHYAC+VDLLG+ GL A + +M + +
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGV 775
Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
W +LL++ ++ N+ L A +L++L+P N S Y L G N+V +++
Sbjct: 776 WGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL----GEVNNVSRIK----- 826
Query: 710 KFLCKEPGYSWIHV 723
K P SWI V
Sbjct: 827 ----KVPACSWIEV 836
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 187/729 (25%), Positives = 352/729 (48%), Gaps = 36/729 (4%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDT-QNRDIITYNALISGLARF 59
Q++ LI +G L P LI+ ++ F + R +FD+ ++ ++ +N++I G R
Sbjct: 23 QVHGSLIVSG--LKP--HNQLINAYSLFQR-QDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 60 CQSGPALKLFDRL-RYQGLRPDAFTFSSLVKAC-GSL--QENEIVHGVCLKLGFSSRVYL 115
AL F + +G+ PD ++F+ +KAC GS+ ++ +H + ++G S VY+
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGL 175
+ +E Y K+ ++VSA F D V + MV G NG + +F +MRS +
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 176 ELNEFSLTAVLGASFDVKEGEQ---IHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDA 232
+++ SL ++ A +++ + +HG +K GF+ ++ ++++Y C A
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA----FSSGLIDMYCNCADLYAA 253
Query: 233 VKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
+F+E+ D SW +AA A +G E LF +R D ++N+ + L +
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
L G I + + G + VS+ +L+SMY KCG++ A +F + +D VSW++MI
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
A Y + G ++A+ +F M+ + PN T+ S+L+ + + + +H + IK+
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT- 468
+ + +I+ Y KC + + + + K+AV NALA +A ++Y+
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 469 -IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCG 527
+ G C + T +L+ CA +D +G ++ +K +D + V A+I+M+ KC
Sbjct: 494 KLHGVCPD--SRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCD 551
Query: 528 TIEDAKRAFRKIC--RDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAV 585
+ A F K C S WN MM GY HG E F +M +P+ +T++ +
Sbjct: 552 ALAAAIVLFDK-CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNI 610
Query: 586 LTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPP 645
+ + +R + S + G Q +VD+ + G++E ++ ++
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI---S 666
Query: 646 DAHI--WQSLLSACTIYG--NIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
+ +I W ++LSA +G + + L + EL+PD+ S +LS AG+ +
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACR-HAGLVEEGK 725
Query: 702 KLRKEMKEK 710
++ +EM E+
Sbjct: 726 RIFEEMGER 734
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 319 bits (817), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 348/648 (53%), Gaps = 21/648 (3%)
Query: 120 IENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNE 179
+ +A S + A F + D + M+ G+ G + ++ + + M G++ +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 180 FS----LTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
F+ + +V G S ++EG++IH +K+GF+S V ++ N++++LY++ G DA K+
Sbjct: 131 FTYPFVIKSVAGIS-SLEEGKKIHAMVIKLGFVSDV--YVCNSLISLYMKLGCAWDAEKV 187
Query: 236 FDEITEPDVVSWSERIA---AACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
F+E+ E D+VSW+ I+ A DG + LFK++ F+ + ++ ++ L +
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 293 RAGKQIQAFCYKV-GFMEV--VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
+ GK+I C+ V +E V + +++ MY K G+V+ A IF+ +I ++ V+WN MI
Sbjct: 248 KMGKEIH--CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 350 AGYSENGFFNQALDMFCHMLEFS-LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
Y+ NG A F M E + L P+ T ++L A ++ + +H + ++ GF
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGF 361
Query: 409 LLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRT 468
L + + LI YG+C L ++ + + +KN + N++ + V + ALEL++
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 469 IWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGT 528
+W S + +T + +L A A L +G+ IH +K+RY + + ++++ MY CG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 529 IEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTS 588
+EDA++ F I + WN+++M YA HG LF++M V P++ T+ ++L +
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 589 CCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAH 648
C +G+V E Y M +G+ P +EHY C++DL+GR G AK +++MP P A
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 649 IWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMK 708
IW SLL+A + +I + A ++ +++ DN YVLL N+YA AG W DV +++ M+
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 709 EKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVA 756
K + + S + G +H F GD SH + +IY E++ + MV
Sbjct: 662 SKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY-EVLDVVSRMVG 708
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/537 (29%), Positives = 279/537 (51%), Gaps = 27/537 (5%)
Query: 14 DPILSTTLISHFTKFADFR---RAFRFLFDTQNR-DIITYNALISGLARFCQSGPALKLF 69
DP L+ L FAD R A + LFD N+ D +N +I G A++ +
Sbjct: 64 DPALTRAL----RGFADSRLMEDALQ-LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFY 118
Query: 70 DRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKS 126
R+ + G++ D FT+ ++K+ SL+E + +H + +KLGF S VY+ + I Y K
Sbjct: 119 SRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL 178
Query: 127 GEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL 186
G AE F + + D V++ +M+ GY+ G+ S +F EM G + + FS + L
Sbjct: 179 GCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238
Query: 187 GAS---FDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPD 243
GA + K G++IH V+ +G + +I+++Y + G+ A ++F+ + + +
Sbjct: 239 GACSHVYSPKMGKEIHCHAVRSRIETGDV-MVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 244 VVSWSERIAA-ACDG--VEAFGLFKDL-RFNDFQINEYTMINLLSSVGGERILRAGKQIQ 299
+V+W+ I A +G +AF F+ + N Q + T INLL + + G+ I
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIH 353
Query: 300 AFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFN 359
+ + GF+ + + ALI MYG+CGQ+ A IFD + K+ +SWNS+IA Y +NG
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 360 QALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLI 419
AL++F + + SL+P+ T+ASIL A + S SL + ++H++I+KS + + +++ L+
Sbjct: 414 SALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLV 473
Query: 420 TTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGS 479
Y C L ++++ + I K+ V N++ ++ L+ + S N S
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKS 533
Query: 480 TFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE--SAVIDMYCKCGTIEDAKR 534
TF+ +L AC+ +++G + ++K Y D +E ++D+ + G AKR
Sbjct: 534 TFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 225/449 (50%), Gaps = 16/449 (3%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
+I++++IK G D + +LIS + K A + + RDI+++N++ISG
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI-----VHGVCLKLGFSSRVYL 115
+L LF + G +PD F+ S + AC + ++ H V ++ + V +
Sbjct: 211 DGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE-TGDVMV 269
Query: 116 VSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSL-G 174
++ ++ Y+K GE+ AE F + + VA+ M+ Y NG + F +M G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 175 LELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
L+ + + +L AS + EG IHG+ ++ GFL + L A++++Y CGQ A
Sbjct: 330 LQPDVITSINLLPAS-AILEGRTIHGYAMRRGFLPHMV--LETALIDMYGECGQLKSAEV 386
Query: 235 MFDEITEPDVVSWSERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
+FD + E +V+SW+ IAA A LF++L + + T+ ++L +
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 292 LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAG 351
L G++I A+ K + I N+L+ MY CG + DAR F++++ KD VSWNS+I
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 352 YSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLD 411
Y+ +GF ++ +F M+ + PN T AS+L A S S + + + + +K + +D
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGID 565
Query: 412 DSM--ISCLITTYGKCNALNESKRVLSEI 438
+ C++ G+ + +KR L E+
Sbjct: 566 PGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 129/278 (46%), Gaps = 14/278 (5%)
Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
++D ++ + + + ++ ++ E++K +A N + + EA++ Y +
Sbjct: 62 VNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
+ + + T+ V+K+ A ++ LE+GK IH + +K + D++V +++I +Y K G
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
DA++ F ++ + WN+M+ GY G LF +M K G KPD + ++ L +C
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEH-----YACIVDLLGRVGLLEGAKMTIDQMPIP 644
H + + + C H + ++E I+D+ + G + A+ + M I
Sbjct: 242 SHVYSPKMGKE-IHC----HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQ 295
Query: 645 PDAHIWQSLLSACTIYGNIDLGLLAGSKLLE---LQPD 679
+ W ++ G + L K+ E LQPD
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD 333
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 318 bits (816), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 222/727 (30%), Positives = 356/727 (48%), Gaps = 76/727 (10%)
Query: 60 CQSGPALKLFDR-LRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSG 118
C++ LK+F R L QGL D T + LV L E L F+ V+
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE-------SLSFAKEVF---- 90
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
EN G CF Y +++ GY +G +++ +F+ M + G+ +
Sbjct: 91 --ENSESYG------TCF---------MYNSLIRGYASSGLCNEAILLFLRMMNSGISPD 133
Query: 179 EFSLTAVLGASFDVK---EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKM 235
+++ L A + G QIHG VK+G+ + + N++++ Y CG+ A K+
Sbjct: 134 KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL--FVQNSLVHFYAECGELDSARKV 191
Query: 236 FDEITEPDVVSWSERIAA------ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGE 289
FDE++E +VVSW+ I A D V+ F F+ +R + N TM+ ++S+
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLF--FRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
L G+++ AF G + +AL+ MY KC ++ A+ +FD + N+M
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
+ Y G +AL +F M++ + P+ +M S + + S +++ H +++++GF
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 410 LDDSMISCLITTYGKCNALNESKRVLS---------------------EID--------- 439
D++ + LI Y KC+ + + R+ E+D
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 440 -KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVN--GSTFSIVLKACAAMTDLEQ 496
+KN V N + S LV S EA+E++ ++ S VN G T + AC + L+
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSM-QSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 497 GKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQ 556
K I+ K D+ + + ++DM+ +CG E A F + ++ W A + A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 557 HGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLE 616
G LF+ M + G+KPD + ++ LT+C H GLV++ + M LHG+ P+
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 617 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 676
HY C+VDLLGR GLLE A I+ MP+ P+ IW SLL+AC + GN+++ A K+ L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 677 QPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSS 736
P+ +YVLLSN+YASAG WND+ K+R MKEK L K PG S I + G TH F +GD S
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 737 HSQSKEI 743
H + I
Sbjct: 729 HPEMPNI 735
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 249/531 (46%), Gaps = 53/531 (9%)
Query: 49 YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQE--NEI-VHGVCL 105
YN+LI G A A+ LF R+ G+ PD +TF + AC + N I +HG+ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
K+G++ +++ + + YA+ GE+ SA F + + + V++T+M+CGY + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 166 VFVEM-RSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMN 221
+F M R + N ++ V+ A D++ GE+++ F G V + + +A+++
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVD 279
Query: 222 LYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV------EAFGLFKDLRFNDFQIN 275
+Y++C A ++FDE ++ + A A + V EA G+F + + + +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCN---AMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 276 EYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFD 335
+M++ +SS R + GK + + GF +I NALI MY KC + + A IFD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 336 YLIFKDSVSWNSMIAGYSENG-------------------------------FFNQALDM 364
+ K V+WNS++AGY ENG F +A+++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 365 FCHML-EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYG 423
FC M + + +G TM SI A + +L A ++ +I K+G LD + + L+ +
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 424 KCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSI 483
+C + + + + ++ A + A A+EL+ + + +G F
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 484 VLKACAAMTDLEQGKAI--HCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
L AC+ ++QGK I L L +D+ ++D+ + G +E+A
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY-GCMVDLLGRAGLLEEA 626
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
IY + KNG LD L TTL+ F++ D A NRD+ + A I +A
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 62 SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKL 107
+ A++LFD + QGL+PD F + AC G +Q+ + + LKL
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 318 bits (816), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/572 (32%), Positives = 307/572 (53%), Gaps = 11/572 (1%)
Query: 191 DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSER 250
D G+QIHGF V+ GFL +++N+Y +CG AV +F +E DV ++
Sbjct: 75 DYVSGQQIHGFMVRKGFLDD-SPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNAL 132
Query: 251 IAA-ACDG--VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGF 307
I+ +G ++A ++++R N ++YT +LL L K++ +K+GF
Sbjct: 133 ISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGF 191
Query: 308 MEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD-SVSWNSMIAGYSENGFFNQALDMFC 366
+G+ L++ Y K V DA+ +FD L +D SV WN+++ GYS+ F AL +F
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 367 HMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCN 426
M E + + +T+ S+L A + S + +H +K+G D + + LI YGK
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 427 ALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLK 486
L E+ + +D+++ N++ V Y H L L+ + S + T + VL
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371
Query: 487 ACAAMTDLEQGKAIH----CLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRD 542
C + L QG+ IH L R + F+ ++++DMY KCG + DA+ F +
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Query: 543 SLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYL 602
A WN M+ GY C ++F+ M + GVKPDEIT++ +L +C H+G + E R +L
Sbjct: 432 DSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFL 491
Query: 603 SCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN 662
+ M ++ ++P +HYAC++D+LGR LE A PI + +W+S+LS+C ++GN
Sbjct: 492 AQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGN 551
Query: 663 IDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIH 722
DL L+AG +L EL+P++ YVL+SN+Y AG + +V +R M+++ + K PG SWI
Sbjct: 552 KDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIV 611
Query: 723 VGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
+ H F+ G+ +H + K I+ L + HM
Sbjct: 612 LKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 227/446 (50%), Gaps = 18/446 (4%)
Query: 1 QIYSLLIKNGHHLD-PILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARF 59
QI+ +++ G D P T+L++ + K RRA +F RD+ YNALISG
Sbjct: 81 QIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAV-LVFGGSERDVFGYNALISGFVVN 139
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI--VHGVCLKLGFSSRVYLVS 117
A++ + +R G+ PD +TF SL+K +++ +++ VHG+ KLGF S Y+ S
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGS 199
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDN-VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
G + +Y+K + A+ F + D D+ V + A+V GY F+ + VF +MR G+
Sbjct: 200 GLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVG 259
Query: 177 LNEFSLTAVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
++ ++T+VL A S D+ G IHG VK G S + ++NA++++Y + +A
Sbjct: 260 VSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV--VSNALIDMYGKSKWLEEAN 317
Query: 234 KMFDEITEPDVVSWSERIAA---ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGER 290
+F+ + E D+ +W+ + D LF+ + + + + T+ +L + G
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 291 ILRAGKQIQAFCYKVGFMEVVS----IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
LR G++I + G + S I N+L+ MY KCG + DAR +FD + KDS SWN
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
MI GY ALDMF M + P+ T +L+A S+S L + + +
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 407 GFLLDDS-MISCLITTYGKCNALNES 431
+L S +C+I G+ + L E+
Sbjct: 498 YNILPTSDHYACVIDMLGRADKLEEA 523
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 180/377 (47%), Gaps = 16/377 (4%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRD-IITYNALISGLARF 59
+++ L K G D + + L++ ++KF A + + +RD + +NAL++G ++
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLV 116
+ AL +F ++R +G+ T +S++ A G + +HG+ +K G S + +
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 117 SGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
+ I+ Y KS + A F + D + +++C + + G+ D + +F M G+
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 177 LNEFSLTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNH--LNNAIMNLYVRCGQKLD 231
+ +LT VL G +++G +IHG+ + G L+ ++ ++N++M++YV+CG D
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 232 AVKMFDEITEPDVVSWSERI----AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
A +FD + D SW+ I +C G A +F + + +E T + LL +
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSC-GELALDMFSCMCRAGVKPDEITFVGLLQACS 479
Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNA-LISMYGKCGQVNDARSI-FDYLIFKDSVSW 345
L G+ A V + S A +I M G+ ++ +A + I + V W
Sbjct: 480 HSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVW 539
Query: 346 NSMIAGYSENGFFNQAL 362
S+++ +G + AL
Sbjct: 540 RSILSSCRLHGNKDLAL 556
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 20/314 (6%)
Query: 376 NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMI-SCLITTYGKCNALNESKRV 434
N T + L+ + K Q+H +++ GFL D + L+ Y KC + + V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 435 LSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDL 494
+++ NAL S V +A+E YR + + + TF +LK AM +L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-EL 176
Query: 495 EQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKIC-RDSLAGWNAMMMG 553
K +H LA K +D D +V S ++ Y K ++EDA++ F ++ RD WNA++ G
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 554 YAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIP 613
Y+Q + + +F+KM + GV T +VL++ +G + R+ +HGL
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS-------IHGLAV 289
Query: 614 QLEHYACIV------DLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGL 667
+ + IV D+ G+ LE A + M D W S+L G+ D L
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGTL 348
Query: 668 LAGSKLL--ELQPD 679
++L ++PD
Sbjct: 349 ALFERMLCSGIRPD 362
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/600 (31%), Positives = 311/600 (51%), Gaps = 42/600 (7%)
Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
+ +Q+H ++ LS + ++++Y +A+ +F + P V++W I
Sbjct: 23 QAKQLHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 254 ACDGV---EAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
D +A F ++R + + ++L S LR G+ + F ++G
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 311 VSIGNALISMYGK---------CGQVND---------------------------ARSIF 334
+ GNAL++MY K G V D R +F
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 335 DYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLK 394
+ + KD VS+N++IAGY+++G + AL M M L P+ +T++S+L S +
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 395 QAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLV 454
+ ++H ++I+ G D + S L+ Y K + +S+RV S + ++ + N+L + V
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 455 YASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIF 514
+ EAL L+R + + + FS V+ ACA + L GK +H L+ + +IF
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 515 VESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFG 574
+ SA++DMY KCG I+ A++ F ++ W A++MG+A HG HE +LF +M + G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 575 VKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGA 634
VKP+++ ++AVLT+C H GLV EA Y + M+ ++GL +LEHYA + DLLGR G LE A
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 635 KMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASA 694
I +M + P +W +LLS+C+++ N++L K+ + +N YVL+ N+YAS
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 695 GMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
G W ++ KLR M++K L K+P SWI + TH F +GD SH +I + L + E M
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 219/461 (47%), Gaps = 54/461 (11%)
Query: 145 VAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGAS---FDVKEGEQIHGF 201
+A+ +++ + F K+ FVEMR+ G + +VL + D++ GE +HGF
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 202 GVKVGFLSGVCN-HLNNAIMNLYVRC---GQKLDAVKMFDEITE---------------- 241
V++G C+ + NA+MN+Y + G K+ +FDE+ +
Sbjct: 131 IVRLGM---DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 242 -----------------PDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDFQINEYTMIN 281
DVVS++ IA A G+ +A + +++ D + + +T+ +
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 282 LLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKD 341
+L + GK+I + + G V IG++L+ MY K ++ D+ +F L +D
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 342 SVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHS 401
+SWNS++AGY +NG +N+AL +F M+ + P +S++ A ++ +L Q+H
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 402 HIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA- 460
++++ GF + + S L+ Y KC + ++++ D+ N + + ++++ + H
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF---DRMNVLDEVSWTAIIMGHALHGH 424
Query: 461 --EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA-IHCLALKARYDQDIFVES 517
EA+ L+ + + N F VL AC+ + +++ + + +Q++ +
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 518 AVIDMYCKCGTIEDAKRAFRKICRDSLAG-WNAMMMGYAQH 557
AV D+ + G +E+A K+C + W+ ++ + H
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 214/481 (44%), Gaps = 80/481 (16%)
Query: 65 ALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
AL F +R G PD F S++K+C L+ E VHG ++LG +Y + +
Sbjct: 89 ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148
Query: 122 NYAK-----------------------SG-EIVSAEMCF--------RDCLDL----DNV 145
YAK SG E V AE C R ++ D V
Sbjct: 149 MYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVV 208
Query: 146 AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVL---GASFDVKEGEQIHGFG 202
+Y ++ GY +G ++ + + EM + L+ + F+L++VL DV +G++IHG+
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 268
Query: 203 VKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VE 259
++ G S V ++ ++++++Y + + D+ ++F + D +SW+ +A E
Sbjct: 269 IRKGIDSDV--YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNE 326
Query: 260 AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALIS 319
A LF+ + + +++ + L GKQ+ + + GF + I +AL+
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 320 MYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYT 379
MY KCG + AR IFD + D VSW ++I G++ +G ++A+ +F M + PN
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 380 MASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEID 439
++L A S+ + +A +G N++ + + E++
Sbjct: 447 FVAVLTACSHVGLVDEA-------------------------WGYFNSMTKVYGLNQELE 481
Query: 440 KKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKA 499
H A+A +L A EA Y I C E GS +S +L +C+ +LE +
Sbjct: 482 -----HYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 500 I 500
+
Sbjct: 534 V 534
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 171/338 (50%), Gaps = 26/338 (7%)
Query: 32 RRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC 91
RR F + +D+++YN +I+G A+ AL++ + L+PD+FT SS++
Sbjct: 196 RRVFEVM---PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 92 GS---LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYT 148
+ + + +HG ++ G S VY+ S ++ YAKS I +E F D +++
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 149 AMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKV 205
++V GYV NG ++++ +F +M + ++ + ++V+ A + G+Q+HG+ ++
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 206 GFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFG 262
GF S + + +A++++Y +CG A K+FD + D VSW+ I A G EA
Sbjct: 373 GFGSNI--FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 263 LFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGN------A 316
LF++++ + N+ + +L++ G +A+ Y +V + A
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACS-----HVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 317 LISMYGKCGQVNDARSIFDYLIFKDSVS-WNSMIAGYS 353
+ + G+ G++ +A + + + + S W+++++ S
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%), Gaps = 6/254 (2%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
+I+ +I+ G D + ++L+ + K A + R RD I++N+L++G +
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYLVS 117
+ AL+LF ++ ++P A FSS++ AC +L + +HG L+ GF S +++ S
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
++ Y+K G I +A F LD V++TA++ G+ +G ++ +F EM+ G++
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 178 NEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNN--AIMNLYVRCGQKLDAVKM 235
N+ + AVL A V ++ G+ + + G+ L + A+ +L R G+ +A
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502
Query: 236 FDEI-TEPDVVSWS 248
++ EP WS
Sbjct: 503 ISKMCVEPTGSVWS 516
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 45/218 (20%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQN-RDIITYNALISGLARF 59
Q++ +++ G + +++ L+ ++K + + A R +FD N D +++ A+I G A
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA-RKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 60 CQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC--------------------GSLQENEI 99
A+ LF+ ++ QG++P+ F +++ AC G QE E
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482
Query: 100 VHGVCLKLGFSSRVYLVSGFIENY--AKSGEIVS------------------AEMCFRDC 139
V LG + ++ FI +G + S AE F
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF--T 540
Query: 140 LDLDNV-AYTAMVCGYVWNGEFDKSKEVFVEMRSLGLE 176
+D +N+ AY M Y NG + + ++ + MR GL
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 271/470 (57%), Gaps = 5/470 (1%)
Query: 290 RILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMI 349
++L G+ + A + F + +GN L++MY KCG + +AR +F+ + +D V+W ++I
Sbjct: 74 KLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLI 133
Query: 350 AGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFL 409
+GYS++ AL F ML F PN +T++S+++A + + Q+H +K GF
Sbjct: 134 SGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193
Query: 410 LDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTI 469
+ + S L+ Y + +++++ V ++ +N V NAL + S +ALEL++ +
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 470 WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTI 529
+ +++ + AC++ LEQGK +H +K+ F + ++DMY K G+I
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 530 EDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSC 589
DA++ F ++ + + WN+++ YAQHG E F +M + G++P+EI++L+VLT+C
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 590 CHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHI 649
H+GL+ E Y M G++P+ HY +VDLLGR G L A I++MPI P A I
Sbjct: 374 SHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432
Query: 650 WQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
W++LL+AC ++ N +LG A + EL PD+ +V+L N+YAS G WND ++RK+MKE
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 710 KFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHMVATAK 759
+ KEP SW+ + H F A D H Q +EI ++ +E ++A K
Sbjct: 493 SGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK----WEEVLAKIK 538
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 11/368 (2%)
Query: 80 DAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCF 136
D +++L+K C + + IVH L+ F + + + + YAK G + A F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 137 RDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE-- 194
D V +T ++ GY + + F +M G NEF+L++V+ A+ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 195 -GEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIA- 252
G Q+HGF VK GF S V H+ +A+++LY R G DA +FD + + VSW+ IA
Sbjct: 179 CGHQLHGFCVKCGFDSNV--HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 253 -AACDGVE-AFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEV 310
A G E A LF+ + + F+ + ++ +L + L GK + A+ K G V
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 311 VSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLE 370
GN L+ MY K G ++DAR IFD L +D VSWNS++ Y+++GF +A+ F M
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 371 FSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNE 430
+ PN + S+L A S+S L + + + K G + + ++ G+ LN
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 431 SKRVLSEI 438
+ R + E+
Sbjct: 417 ALRFIEEM 424
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 186/370 (50%), Gaps = 13/370 (3%)
Query: 198 IHGFGVKVGFLSGVCNH---LNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA- 253
I G V L + H + N ++N+Y +CG +A K+F+++ + D V+W+ I+
Sbjct: 77 IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGY 136
Query: 254 -----ACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFM 308
CD + F LRF + NE+T+ +++ + ER G Q+ FC K GF
Sbjct: 137 SQHDRPCDALLFFNQM--LRFG-YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193
Query: 309 EVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHM 368
V +G+AL+ +Y + G ++DA+ +FD L ++ VSWN++IAG++ +AL++F M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 369 LEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNAL 428
L P+ ++ AS+ A S++ L+Q VH+++IKSG L + L+ Y K ++
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 429 NESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKAC 488
++++++ + K++ V N+L + EA+ + + N +F VL AC
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 489 AAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAG-W 547
+ L++G + L K + + V+D+ + G + A R ++ + A W
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIW 433
Query: 548 NAMMMGYAQH 557
A++ H
Sbjct: 434 KALLNACRMH 443
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 12/346 (3%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLR 73
D ++ TL++ + K A + RD +T+ LISG ++ + AL F+++
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 74 YQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIV 130
G P+ FT SS++KA + + +HG C+K GF S V++ S ++ Y + G +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 131 SAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASF 190
A++ F ++V++ A++ G+ +K+ E+F M G + FS ++ GA
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 191 D---VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSW 247
+++G+ +H + +K G + N ++++Y + G DA K+FD + + DVVSW
Sbjct: 274 STGFLEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 248 SERIAAACD---GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK 304
+ + A G EA F+++R + NE + +++L++ +L G K
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 305 VGFMEVVSIGNALISMYGKCGQVNDA-RSIFDYLIFKDSVSWNSMI 349
G + ++ + G+ G +N A R I + I + W +++
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 7/296 (2%)
Query: 369 LEFSLIPNGYTM-ASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
LE S IP ++L+ + K L Q VH+HI++S F D M + L+ Y KC +
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
L E+++V ++ +++ V L S +AL + + N T S V+KA
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
AA G +H +K +D ++ V SA++D+Y + G ++DA+ F + + W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSD 607
NA++ G+A+ + LF M + G +P +Y ++ +C G + + + + M
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 608 LHGLIPQLEHYA--CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYG 661
+L +A ++D+ + G + A+ D++ D W SLL+A +G
Sbjct: 291 SG---EKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 316 bits (809), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 299/588 (50%), Gaps = 11/588 (1%)
Query: 166 VFVEMRSLGLELNEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNL 222
+F EM+ G E N F+ V A DV E +H +K F S V + A +++
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDV--FVGTATVDM 96
Query: 223 YVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTM 279
+V+C A K+F+ + E D +W+ ++ C +AF LF+++R N+ + T+
Sbjct: 97 FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTV 156
Query: 280 INLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIF 339
+ L+ S E+ L+ + + A ++G V++ N IS YGKCG ++ A+ +F+ +
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216
Query: 340 KDS--VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAM 397
D VSWNSM YS G A ++C ML P+ T ++ + N ++L Q
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 398 QVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYAS 457
+HSH I G D I+ I+ Y K ++ + + + V + S
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 458 CHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLA-LKARYDQDIFVE 516
EAL L+ + S + + T ++ C LE GK I A + ++ +
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 517 SAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVK 576
+A+IDMY KCG+I +A+ F ++ W M+ GYA +G + E LF+KM K
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 577 PDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKM 636
P+ IT+LAVL +C H+G + + Y M ++ + P L+HY+C+VDLLGR G LE A
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 637 TIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGM 696
I M PDA IW +LL+AC I+ N+ + A L L+P + YV ++N+YA+AGM
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 576
Query: 697 WNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIY 744
W+ ++R MK++ + K PG S I V G H F G+ H +++ IY
Sbjct: 577 WDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 28/507 (5%)
Query: 65 ALKLFDRLRYQGLRPDAFTFSSLVKACGSLQEN---EIVHGVCLKLGFSSRVYLVSGFIE 121
+L LF ++ G P+ FTF + KAC L + E+VH +K F S V++ + ++
Sbjct: 36 SLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVD 95
Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
+ K + A F + D + AM+ G+ +G DK+ +F EMR LNE +
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR-----LNEIT 150
Query: 182 ------LTAVLGASFD--VKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAV 233
+T + ASF+ +K E +H G+++G V + N ++ Y +CG LD+
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT--VANTWISTYGKCGD-LDSA 207
Query: 234 KM-FDEITEPD--VVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
K+ F+ I D VVSW+ A + +AFGL+ + +F+ + T INL +S
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 267
Query: 288 GERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNS 347
L G+ I + +G + + N ISMY K AR +FD + + VSW
Sbjct: 268 NPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTV 327
Query: 348 MIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSG 407
MI+GY+E G ++AL +F M++ P+ T+ S++ SL+ + + G
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387
Query: 408 FLLDDSMI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELY 466
D+ MI + LI Y KC +++E++ + +K V + + EAL+L+
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 467 RTIWGSCREVNGSTFSIVLKACAAMTDLEQG-KAIHCLALKARYDQDIFVESAVIDMYCK 525
+ + N TF VL+ACA LE+G + H + + S ++D+ +
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 526 CGTIEDAKRAFRKICRDSLAG-WNAMM 551
G +E+A R + AG W A++
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALL 534
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 223/457 (48%), Gaps = 23/457 (5%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
+++ LIK+ D + T + F K A + RD T+NA++SG FCQ
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG---FCQ 130
Query: 62 SG---PALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRVYL 115
SG A LF +R + PD+ T +L+++ SL+ E +H V ++LG +V +
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 116 VSGFIENYAKSGEIVSAEMCFR--DCLDLDNVAYTAMVCGYVWNGE-FDKSKEVFVEMR- 171
+ +I Y K G++ SA++ F D D V++ +M Y GE FD + +R
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 172 SLGLELNEF-SLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKL 230
+L+ F +L A + +G IH + +G + N +++Y +
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDI--EAINTFISMYSKSEDTC 308
Query: 231 DAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVG 287
A +FD +T VSW+ I A D EA LF + + + + T+++L+S G
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 288 GERILRAGKQIQAFCYKVG-FMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWN 346
L GK I A G + V I NALI MY KCG +++AR IFD K V+W
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428
Query: 347 SMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKS 406
+MIAGY+ NG F +AL +F M++ PN T ++L+A ++S SL++ + + HI+K
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQ 487
Query: 407 GFLLDDSM--ISCLITTYGKCNALNESKRVLSEIDKK 441
+ + + SC++ G+ L E+ ++ + K
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 20/242 (8%)
Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVI 520
E+L L+R + E N TF V KACA + D+ + +H +K+ + D+FV +A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 521 DMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEI 580
DM+ KC +++ A + F ++ WNAM+ G+ Q G + +LF +M + PD +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 581 TYLAVLTSCCHAGLVREARTYLSCMSDLH------GLIPQLEHYACIVDLLGRVGLLEGA 634
T + ++ S L + +H G+ Q+ + G+ G L+ A
Sbjct: 155 TVMTLIQSASF-------EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 207
Query: 635 KMTIDQMPIPPDAHI-WQSLLSACTIYGNI--DLGLLAGSKLLELQPDNESTYVLLSNLY 691
K+ + + + W S+ A +++G GL E +PD ST++ NL
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD-LSTFI---NLA 263
Query: 692 AS 693
AS
Sbjct: 264 AS 265
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 2/258 (0%)
Query: 344 SWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHI 403
+WN I ++L +F M PN +T + +A + + VH+H+
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 404 IKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEAL 463
IKS F D + + + + KCN+++ + +V + +++A NA+ S + +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 464 ELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMY 523
L+R + + + T ++++ + L+ +A+H + ++ D + V + I Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 524 CKCGTIEDAKRAFRKICR--DSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
KCG ++ AK F I R ++ WN+M Y+ G + L+ M + KPD T
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 582 YLAVLTSCCHAGLVREAR 599
++ + SC + + + R
Sbjct: 259 FINLAASCQNPETLTQGR 276
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 289/542 (53%), Gaps = 4/542 (0%)
Query: 217 NAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGVE---AFGLFKDLRFNDFQ 273
N++++LY +CG+ +DA+K+FDE+ DV+S + E F L K +
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-LGSGG 152
Query: 274 INEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
+ T+ +LS K I A G+ + +S+GN LI+ Y KCG R +
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
FD + ++ ++ ++I+G EN L +F M + PN T S L A S S+ +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
+ Q+H+ + K G + + S L+ Y KC ++ ++ + + + V + + L
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDI 513
EA++ + + + E++ + S VL L GK +H L +K ++ +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 514 FVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKF 573
FV + +I+MY KCG + D++ FR++ + + WN+M+ +A+HG L+ +M+
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL 452
Query: 574 GVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEG 633
VKP ++T+L++L +C H GL+ + R L+ M ++HG+ P+ EHY CI+D+LGR GLL+
Sbjct: 453 EVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512
Query: 634 AKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYAS 693
AK ID +P+ PD IWQ+LL AC+ +G+ ++G A +L + PD+ S ++L++N+Y+S
Sbjct: 513 AKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSS 572
Query: 694 AGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEH 753
G W + K K MK + KE G S I + TH F D H Q++ IY L L+
Sbjct: 573 RGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPV 632
Query: 754 MV 755
MV
Sbjct: 633 MV 634
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 182/367 (49%), Gaps = 15/367 (4%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFD-TQNRDIITYNALISGLARFC 60
I++L I +G+ + + LI+ + K + R +FD +R++IT A+ISGL
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFK-CGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGVCLKLGFSSRVYLVS 117
L+LF +R + P++ T+ S + AC Q E + +H + K G S + + S
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIES 295
Query: 118 GFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLEL 177
++ Y+K G I A F ++D V+ T ++ G NG +++ + F+ M G+E+
Sbjct: 296 ALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355
Query: 178 NEFSLTAVLGASF---DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVK 234
+ ++AVLG SF + G+Q+H +K F +NN ++N+Y +CG D+
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN--TFVNNGLINMYSKCGDLTDSQT 413
Query: 235 MFDEITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERI 291
+F + + + VSW+ IAA G+ A L++++ + + + T ++LL + +
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473
Query: 292 LRAGKQIQAFCYKV-GFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFK-DSVSWNSMI 349
+ G+++ +V G +I M G+ G + +A+S D L K D W +++
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 350 AGYSENG 356
S +G
Sbjct: 534 GACSFHG 540
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 18/405 (4%)
Query: 313 IGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFS 372
+ N+L+S+Y KCG++ DA +FD + +D +S N + G+ N + ML
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 373 LIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESK 432
+ T+ +L + +H+ I SG+ + S+ + LIT+Y KC +
Sbjct: 152 GFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 433 RVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMT 492
V + +N + + A+ S L+ H + L L+ + N T+ L AC+
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 493 DLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMM 552
+ +G+ IH L K + ++ +ESA++DMY KCG+IEDA F +++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 553 GYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLI 612
G AQ+G E F +M + GV+ D AVL V L LH L+
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG-------VSFIDNSLGLGKQLHSLV 383
Query: 613 PQLEHYA------CIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGN--ID 664
+ + ++++ + G L ++ +MP + W S+++A +G+
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAA 442
Query: 665 LGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKE 709
L L LE++P + T++ L + + G+ + +L EMKE
Sbjct: 443 LKLYEEMTTLEVKP-TDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFC 60
Q++SL+IK + ++ LI+ ++K D + R+ +++N++I+ AR
Sbjct: 378 QLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437
Query: 61 QSGPALKLFDRLRYQGLRPDAFTFSSLVKACGS----------LQENEIVHGV 103
ALKL++ + ++P TF SL+ AC L E + VHG+
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 315 bits (807), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 205/697 (29%), Positives = 348/697 (49%), Gaps = 9/697 (1%)
Query: 49 YNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEI---VHGVCL 105
+N+ I+ L+ L F + L PD FTF SL+KAC SLQ +H L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 106 KLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKE 165
GFSS Y+ S + YAK G + A F + + D V +TAM+ Y G ++
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 166 VFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVR 225
+ EMR G++ +L +L ++ + + +H F V GF + + N+++NLY +
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIA--VMNSMLNLYCK 191
Query: 226 CGQKLDAVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINL 282
C DA +FD++ + D+VSW+ I A+ + E L +R + + ++ T
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
LS G L G+ + K GF + + ALI+MY KCG+ + + + + KD
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
V W MI+G G +AL +F ML+ + +AS++ + + S VH +
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 403 IIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEA 462
+++ G+ LD ++ LIT Y KC L++S + +++++ V NA+ S +A
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 463 LELYRTI-WGSCREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVID 521
L L+ + + + ++V+ T +L+AC++ L GK IHC+ +++ V++A++D
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 522 MYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEIT 581
MY KCG +E A+R F I + W ++ GY HG ++++ G++P+ +
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 582 YLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQM 641
+LAVL+SC H G+V++ S M G+ P EH AC+VDLL R +E A +
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 642 PIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVG 701
P + +L AC G ++ + ++EL+P + YV L + +A+ W+DV
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVS 671
Query: 702 KLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHS 738
+ +M+ L K PG+S I + G T F+ +SHS
Sbjct: 672 ESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 267/552 (48%), Gaps = 24/552 (4%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
I+ ++ NG D +S++L++ + KF A + + + RD++ + A+I +R
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 62 SGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIE 121
G A L + +R+QG++P T ++ + + + +H + GF + +++ +
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 122 NYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFS 181
Y K + A+ F D V++ M+ GY G + ++ MR GL ++ +
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 182 LTAVL---GASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
A L G D++ G +H VK GF V HL A++ +Y++CG++ + ++ +
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGF--DVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 239 ITEPDVVSWSERIAAAC---DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
I DVV W+ I+ +A +F ++ + ++ + ++++S G
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
+ + + G+ N+LI+MY KCG ++ + IF+ + +D VSWN++I+GY++N
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 356 GFFNQALDMFCHMLEFSLIP--NGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDS 413
+AL +F M +F + + +T+ S+L+A S++ +L +H +I+S F+ S
Sbjct: 426 VDLCKALLLFEEM-KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS-FIRPCS 483
Query: 414 MI-SCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
++ + L+ Y KC L ++R I K+ V L + + ALE+Y S
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHS 543
Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVE------SAVIDMYCKC 526
E N F VL +C+ ++QG L + + +D VE + V+D+ C+
Sbjct: 544 GMEPNHVIFLAVLSSCSHNGMVQQG-----LKIFSSMVRDFGVEPNHEHLACVVDLLCRA 598
Query: 527 GTIEDAKRAFRK 538
IEDA + +++
Sbjct: 599 KRIEDAFKFYKE 610
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 290/582 (49%), Gaps = 46/582 (7%)
Query: 180 FSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH-LNNAIMNLYVRCGQKLDAVKMFDE 238
F L VL D++ +H ++ CN L +M Y A K+FDE
Sbjct: 43 FLLGQVLDTYPDIRTLRTVHS---RIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 239 ITEPDVVSWSERIAAAC------DGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERIL 292
I E +V+ + I + +GV+ FG + + + YT +L + +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC---NVRPDHYTFPCVLKACSCSGTI 156
Query: 293 RAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGY 352
G++I KVG + +GN L+SMYGKCG +++AR + D + +D VSWNS++ GY
Sbjct: 157 VIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216
Query: 353 SENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDD 412
++N F+ AL++ M + + TMAS+L AVSN+ + + M V K G
Sbjct: 217 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMG----- 270
Query: 413 SMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGS 472
KK+ V N + V + + EA+ELY +
Sbjct: 271 ---------------------------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 303
Query: 473 CREVNGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDA 532
E + + + VL AC + L GK IH + + ++ +E+A+IDMY KCG +E A
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 533 KRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHA 592
+ F + + W AM+ Y G + LF+K+ G+ PD I ++ L +C HA
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 593 GLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQS 652
GL+ E R+ M+D + + P+LEH AC+VDLLGR G ++ A I M + P+ +W +
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 653 LLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFL 712
LL AC ++ + D+GLLA KL +L P+ YVLLSN+YA AG W +V +R MK K L
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 713 CKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKELIKLYEHM 754
K PG S + V H F GD SH QS EIY+EL L + M
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 197/445 (44%), Gaps = 41/445 (9%)
Query: 2 IYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQ 61
++S +I + L L+ + D A + + R++I N +I
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 62 SGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSG 118
G +K+F + +RPD +TF ++KAC G++ +HG K+G SS +++ +G
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 119 FIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELN 178
+ Y K G + A + + D V++ ++V GY N FD + EV EM S+ +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS-- 238
Query: 179 EFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDE 238
H G L V N +M YV+ MF +
Sbjct: 239 --------------------HDAGTMASLLPAVSNTTTENVM--YVK--------DMFFK 268
Query: 239 ITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAG 295
+ + +VSW+ I VEA L+ + + F+ + ++ ++L + G L G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 296 KQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSEN 355
K+I + + + + + NALI MY KCG + AR +F+ + +D VSW +MI+ Y +
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 356 GFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSM- 414
G A+ +F + + L+P+ + L A S++ L++ ++ + + +
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK-LMTDHYKITPRLE 447
Query: 415 -ISCLITTYGKCNALNESKRVLSEI 438
++C++ G+ + E+ R + ++
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDM 472
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 294/550 (53%), Gaps = 38/550 (6%)
Query: 232 AVKMFDEITEPDVVSWSERI---AAACDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGG 288
A+ +F I EP+++ W+ A + D V A L+ + N YT +L S
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 289 ERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDY------------ 336
+ + G+QI K+G + + +LISMY + G++ DA +FD
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 337 -------------------LIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNG 377
+ KD VSWN+MI+GY+E G + +AL++F M++ ++ P+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 378 YTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSE 437
TM +++ A + S S++ QVH I GF + +++ LI Y KC L + +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 438 IDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQG 497
+ K+ + N L + + + EAL L++ + S N T +L ACA + ++ G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 498 KAIHCL---ALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGY 554
+ IH LK + + +++IDMY KCG IE A + F I SL+ WNAM+ G+
Sbjct: 387 RWIHVYIDKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 555 AQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQ 614
A HG +LF++M K G++PD+IT++ +L++C H+G++ R M+ + + P+
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505
Query: 615 LEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLL 674
LEHY C++DLLG GL + A+ I+ M + PD IW SLL AC ++GN++LG L+
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 565
Query: 675 ELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGD 734
+++P+N +YVLLSN+YASAG WN+V K R + +K + K PG S I + H F GD
Sbjct: 566 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 625
Query: 735 SSHSQSKEIY 744
H +++EIY
Sbjct: 626 KFHPRNREIY 635
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 216/460 (46%), Gaps = 50/460 (10%)
Query: 86 SLVKACGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGE---IVSAEMCFRDCLDL 142
SL+ C +LQ I+H +K+G + Y +S IE S + A F+ +
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 143 DNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
+ + + M G+ + + + +++V M SLGL N ++ VL + S KEG+QIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 200 GFGVKVGFLSGVCN---HLNNAIMNLYVRCGQKLDA------------------------ 232
G +K+G C+ +++ +++++YV+ G+ DA
Sbjct: 158 GHVLKLG-----CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 233 -------VKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINEYTMINL 282
K+FDEI DVVSW+ I+ + EA LFKD+ + + +E TM+ +
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 283 LSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDS 342
+S+ + G+Q+ + GF + I NALI +Y KCG++ A +F+ L +KD
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 343 VSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSH 402
+SWN++I GY+ + +AL +F ML PN TM SIL A ++ ++ +H +
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 403 IIK--SGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVLVYASCHA 460
I K G S+ + LI Y KC + + +V + I K+ NA+
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 461 EALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
+ +L+ + + + TF +L AC+ L+ G+ I
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 203/439 (46%), Gaps = 51/439 (11%)
Query: 2 IYSLLIKNGHH-----LDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGL 56
I++ +IK G H L ++ ++S F A Q +++ +N + G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILS--PHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 57 ARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACG---SLQENEIVHGVCLKLGFSSRV 113
A ALKL+ + GL P+++TF ++K+C + +E + +HG LKLG +
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 114 YLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYV------------------ 155
Y+ + I Y ++G + A F D V+YTA++ GY
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 156 ----WN---------GEFDKSKEVFVEMRSLGLELNEFSLTAVLGA---SFDVKEGEQIH 199
WN G + ++ E+F +M + +E ++ V+ A S ++ G Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 200 GFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG-- 257
+ GF S + + NA+++LY +CG+ A +F+ + DV+SW+ I
Sbjct: 290 LWIDDHGFGSNL--KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 258 -VEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQIQAFCYK--VGFMEVVSIG 314
EA LF+++ + N+ TM+++L + + G+ I + K G S+
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 315 NALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLI 374
+LI MY KCG + A +F+ ++ K SWN+MI G++ +G + + D+F M + +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 375 PNGYTMASILEAVSNSKSL 393
P+ T +L A S+S L
Sbjct: 468 PDDITFVGLLSACSHSGML 486
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 136/311 (43%), Gaps = 40/311 (12%)
Query: 384 LEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMIS-----CLITTYGKCNALNESKRVLSEI 438
L + N K+L+ +H+ +IK G + +S C+++ + + L + V I
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKTI 94
Query: 439 DKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGK 498
+ N + N + +S AL+LY + N TF VLK+CA ++G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 499 AIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRK-------------------- 538
IH LK D D++V +++I MY + G +EDA + F K
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 539 -----------ICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLT 587
I + WNAM+ GYA+ G Y E LF M K V+PDE T + V++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 588 SCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDA 647
+C +G + R + D HG L+ ++DL + G LE A +++P D
Sbjct: 275 ACAQSGSIELGRQVHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDV 332
Query: 648 HIWQSLLSACT 658
W +L+ T
Sbjct: 333 ISWNTLIGGYT 343
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 48/342 (14%)
Query: 1 QIYSLLIKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLAR-- 58
QI+ ++K G LD + T+LIS + + A + + +RD+++Y ALI G A
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 59 --------------------------FCQSG---PALKLFDRLRYQGLRPDAFTFSSLVK 89
+ ++G AL+LF + +RPD T ++V
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 90 AC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVA 146
AC GS++ VH GF S + +V+ I+ Y+K GE+ +A F D ++
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 147 YTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGA-----SFDVKEGEQIHGF 201
+ ++ GY + ++ +F EM G N+ ++ ++L A + D+ G IH +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI--GRWIHVY 392
Query: 202 GVKVGFLSGVCN--HLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERI---AAACD 256
K L GV N L +++++Y +CG A ++F+ I + SW+ I A
Sbjct: 393 IDKR--LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 257 GVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
+F LF +R Q ++ T + LLS+ +L G+ I
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 313 bits (802), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 311/596 (52%), Gaps = 9/596 (1%)
Query: 159 EFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKEGEQIHGFGVKVGFLSGVCNH---L 215
+ +++ E EM G+ ++ +S + A +++ HG + G+ N L
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLS--HGRLLHDRMRMGIENPSVLL 120
Query: 216 NNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA-ACDGV--EAFGLFKDLRFNDF 272
N ++ +Y C DA K+FDE++E + VS + I+A A G+ +A GLF + +
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 273 QINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARS 332
+ LL S+ R L G+QI A + G SI +++MY KCG + A+
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 333 IFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKS 392
+FD + K V+ ++ GY++ G AL +F ++ + + + + +L+A ++ +
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 393 LKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASV 452
L Q+H+ + K G + S+ + L+ Y KC++ + R EI + N V +A+ S
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 453 LVYASCHAEALELYRTIWGSCREV-NGSTFSIVLKACAAMTDLEQGKAIHCLALKARYDQ 511
S EA++ ++++ + N T++ + +AC+ + D G +H A+K
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 512 DIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGWNAMMMGYAQHGCYHEVSNLFNKMS 571
+ ESA+I MY KCG ++DA F + + W A + G+A +G E LF KM
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 572 KFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMSDLHGLIPQLEHYACIVDLLGRVGLL 631
G+KP+ +T++AVLT+C HAGLV + + L M + + P ++HY C++D+ R GLL
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 632 EGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLELQPDNESTYVLLSNLY 691
+ A + MP PDA W+ LS C + N++LG +AG +L +L P++ + YVL NLY
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 692 ASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHVGGYTHHFYAGDSSHSQSKEIYKEL 747
AG W + ++ K M E+ L KE SWI G H F GD H Q++EIY++L
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKL 656
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 195/413 (47%), Gaps = 14/413 (3%)
Query: 38 LFDTQNR-DIITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKAC---GS 93
LFD + + ++ +IS A A+ LF + G +P + +++L+K+ +
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 94 LQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCG 153
L +H ++ G S + +G + Y K G +V A+ F VA T ++ G
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 154 YVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVKE---GEQIHGFGVKVGFLSG 210
Y G + ++FV++ + G+E + F + VL A ++E G+QIH K+G S
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 211 VCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDGV---EAFGLFKDL 267
V + +++ Y++C A + F EI EP+ VSWS I+ C EA FK L
Sbjct: 320 V--SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 268 RFNDFQI-NEYTMINLLSSVGGERILRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQ 326
R + I N +T ++ + G Q+ A K + +ALI+MY KCG
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 327 VNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEA 386
++DA +F+ + D V+W + I+G++ G ++AL +F M+ + PN T ++L A
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 387 VSNSKSLKQAMQ-VHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEI 438
S++ ++Q + + + K C+I Y + L+E+ + + +
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 19 TTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLFDRLRYQGLR 78
+ LI+ ++K A N DI+ + A ISG A + + AL+LF+++ G++
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 79 PDAFTFSSLVKAC 91
P++ TF +++ AC
Sbjct: 486 PNSVTFIAVLTAC 498
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 312 bits (800), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 203/658 (30%), Positives = 345/658 (52%), Gaps = 23/658 (3%)
Query: 84 FSSLVKAC---GSLQENEIVHGVCLK--LGFSSRVYLVSGFIENYAKSGEIVSAEMCFRD 138
F SL++ C +L +++H LK L SS LV+ YA E+ A F +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 139 CLD--LDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAVLGASFDVK--- 193
++ +A+ M+ Y N +K+ +++ +M + G+ +++ VL A ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 194 EGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAA 253
+G+ IH F + + ++ A+++ Y +CG+ A+K+FDE+ + D+V+W+ I+
Sbjct: 121 DGKLIHSHVNCSDFATDM--YVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISG 178
Query: 254 ---ACDGVEAFGLFKDLRFND-FQINEYTMINLLSSVGGERILRAGKQIQAFCYKVGFME 309
C + GLF D+R D N T++ + ++G LR GK + +C ++GF
Sbjct: 179 FSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 310 VVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHML 369
+ + ++ +Y K + AR +FD K+ V+W++MI GY EN +A ++F ML
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 370 --EFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNA 427
+ + + IL + L VH + +K+GF+LD ++ + +I+ Y K +
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 428 LNESKRVLSEIDKKNAVHINALASVLVYASCHAEALELYRTIWGSCREVNGSTFSIVLKA 487
L ++ R SEI K+ + N+L + V E+ L+ + S + +T VL A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 488 CAAMTDLEQGKAIHCLALKARYDQDIFVESAVIDMYCKCGTIEDAKRAFRKICRDSLAGW 547
C+ + L G + H + Y + + +A++DMY KCG ++ AKR F + + + W
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478
Query: 548 NAMMMGYAQHGCYHEVSNLFNKMSKFGVKPDEITYLAVLTSCCHAGLVREARTYLSCMS- 606
N M+ G+ HG E +LFN M + GV PDE+T LA+L++C H+GLV E + + MS
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 607 -DLHGLIPQLEHYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDL 665
D + +IP+++HY C+ DLL R G L+ A +++MP PD + +LLSAC Y N +L
Sbjct: 539 GDFN-VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597
Query: 666 GLLAGSKLLELQPDNESTYVLLSNLYASAGMWNDVGKLRKEMKEKFLCKEPGYSWIHV 723
G K+ L ES VLLSN Y++A W D ++R K++ L K PGYSW+ V
Sbjct: 598 GNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 211/410 (51%), Gaps = 20/410 (4%)
Query: 14 DPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPALKLF-DRL 72
D + T L+ + K + A + + RD++ +NA+ISG + C + LF D
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 73 RYQGLRPDAFTFSSLVKA---CGSLQENEIVHGVCLKLGFSSRVYLVSGFIENYAKSGEI 129
R GL P+ T + A G+L+E + VHG C ++GFS+ + + +G ++ YAKS I
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256
Query: 130 VSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLTAV---- 185
+ A F + V ++AM+ GYV N ++ EVF +M + N +T V
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML---VNDNVAMVTPVAIGL 313
Query: 186 --LG-ASF-DVKEGEQIHGFGVKVGFLSGVCNHLNNAIMNLYVRCGQKLDAVKMFDEITE 241
+G A F D+ G +H + VK GF+ + + N I++ Y + G DA + F EI
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLT--VQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 242 PDVVSWSERIAAA---CDGVEAFGLFKDLRFNDFQINEYTMINLLSSVGGERILRAGKQI 298
DV+S++ I C E+F LF ++R + + + T++ +L++ L G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 299 QAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSIFDYLIFKDSVSWNSMIAGYSENGFF 358
+C G+ SI NAL+ MY KCG+++ A+ +FD + +D VSWN+M+ G+ +G
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 359 NQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSLKQAMQVHSHIIKSGF 408
+AL +F M E + P+ T+ +IL A S+S + + Q+ + + + F
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF 541
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 228/467 (48%), Gaps = 16/467 (3%)
Query: 47 ITYNALISGLARFCQSGPALKLFDRLRYQGLRPDAFTFSSLVKACGSLQ---ENEIVHGV 103
I ++ +I A + AL L+ ++ G+RP +T+ ++KAC L+ + +++H
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 104 CLKLGFSSRVYLVSGFIENYAKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKS 163
F++ +Y+ + ++ YAK GE+ A F + D VA+ AM+ G+ +
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDV 188
Query: 164 KEVFVEMRSL-GLELNEFSLTAV---LGASFDVKEGEQIHGFGVKVGFLSGVCNHLNNAI 219
+F++MR + GL N ++ + LG + ++EG+ +HG+ ++GF + + + I
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV--VKTGI 246
Query: 220 MNLYVRCGQKLDAVKMFDEITEPDVVSWSERIAAACDG---VEAFGLFKDLRFNDFQINE 276
+++Y + + A ++FD + + V+WS I + EA +F + ND +
Sbjct: 247 LDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND-NVAM 305
Query: 277 YTMINL-LSSVGGERI--LRAGKQIQAFCYKVGFMEVVSIGNALISMYGKCGQVNDARSI 333
T + + L +G R L G+ + + K GF+ +++ N +IS Y K G + DA
Sbjct: 306 VTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQ 365
Query: 334 FDYLIFKDSVSWNSMIAGYSENGFFNQALDMFCHMLEFSLIPNGYTMASILEAVSNSKSL 393
F + KD +S+NS+I G N ++ +F M + P+ T+ +L A S+ +L
Sbjct: 366 FSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAAL 425
Query: 394 KQAMQVHSHIIKSGFLLDDSMISCLITTYGKCNALNESKRVLSEIDKKNAVHINALASVL 453
H + + G+ ++ S+ + L+ Y KC L+ +KRV + K++ V N +
Sbjct: 426 GHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGF 485
Query: 454 VYASCHAEALELYRTIWGSCREVNGSTFSIVLKACAAMTDLEQGKAI 500
EAL L+ ++ + + T +L AC+ +++GK +
Sbjct: 486 GIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 7 IKNGHHLDPILSTTLISHFTKFADFRRAFRFLFDTQNRDIITYNALISGLARFCQSGPAL 66
+K G LD + T+IS + K+ AFR + +D+I+YN+LI+G C+ +
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 67 KLFDRLRYQGLRPDAFTFSSLVKAC---GSLQENEIVHGVCLKLGFSSRVYLVSGFIENY 123
+LF +R G+RPD T ++ AC +L HG C+ G++ + + ++ Y
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454
Query: 124 AKSGEIVSAEMCFRDCLDLDNVAYTAMVCGYVWNGEFDKSKEVFVEMRSLGLELNEFSLT 183
K G++ A+ F D V++ M+ G+ +G ++ +F M+ G+ +E +L
Sbjct: 455 TKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLL 514
Query: 184 AVLGA---SFDVKEGEQIHGFGVKVGFLSGVCNHLN--NAIMNLYVRCGQKLDAVKMFDE 238
A+L A S V EG+Q+ + F V ++ N + +L R G +A ++
Sbjct: 515 AILSACSHSGLVDEGKQLFNSMSRGDF--NVIPRIDHYNCMTDLLARAGYLDEAYDFVNK 572
Query: 239 IT-EPDV 244
+ EPD+
Sbjct: 573 MPFEPDI 579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 273,026,127
Number of Sequences: 539616
Number of extensions: 11189024
Number of successful extensions: 41931
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 31602
Number of HSP's gapped (non-prelim): 3135
length of query: 760
length of database: 191,569,459
effective HSP length: 125
effective length of query: 635
effective length of database: 124,117,459
effective search space: 78814586465
effective search space used: 78814586465
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)