BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041188
(409 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana
GN=FLA21 PE=2 SV=1
Length = 353
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 129/291 (44%), Gaps = 30/291 (10%)
Query: 90 SWSGPSTLFAPSD------SSLHTCFSCSVPSLLREHLVPGLFTIDYLRKLAFGTKIESL 143
S S +TLFA D SSLH F + LL H +P + ++D L K GT + +L
Sbjct: 77 SSSPNTTLFAIEDASFFNTSSLHPLF---LKQLLHYHTLPLMLSMDDLLKKPQGTCLPTL 133
Query: 144 SPGRCITITSSKSENDTVSKVFIGGVEITHPDLFNNGIIIIHGIQGYISPLSPLSCDVER 203
+ + I++ E+ T + V ITHPD+F ++IHG+ G SPL P S +
Sbjct: 134 LHHKSVQISTVNQESRTAE---VNHVRITHPDMFLGDSLVIHGVIGPFSPLQPHSDHL-- 188
Query: 204 MTSLSFPFQPSDRGHHHQQIQTQQPIMRLMLRDAMLRLRNNGYSILSLAMKVKYQELIN- 262
+ P SD + + P+ R L L +NG+ ++ + ++N
Sbjct: 189 ---IHTPLCQSDTTNKTSN-NEEVPVSIDWTRIVQL-LSSNGFVPFAIGLHSVLNRIVND 243
Query: 263 ------LANMTVFALDD-VSIFSGSYTYISNVRFHIIPNRYLTIGDLERLPVGTTLPTLA 315
L +T+ A + VS+ S S VR HI+ R LT D + T+ TL
Sbjct: 244 HNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILVQR-LTYKDFASMSDKATVKTLD 302
Query: 316 RGQSLTVTTAGGASVTAPLRINYVRVKVPDVMKNLKIVVHGI--YLPFPHL 364
Q LT+T S I+ V + PD+ + V+HGI L PH+
Sbjct: 303 PYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVIHGISHTLEIPHV 353
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 241 LRNNGYSILSLAMKVKYQELINLA-NMTVFALDDVSIFSGSYTY----ISNVRFHIIPNR 295
LR + + ++ + + + ++ + N T+FA++D S F+ S + + +H +P
Sbjct: 56 LRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLP-L 114
Query: 296 YLTIGDLERLPVGTTLPTLARGQSLTVTTAGGASVTAPLRINYVRVKVPDVMKNLKIVVH 355
L++ DL + P GT LPTL +S+ ++T S TA +N+VR+ PD+ +V+H
Sbjct: 115 MLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTA--EVNHVRITHPDMFLGDSLVIH 172
Query: 356 GIYLPFPHLHP 366
G+ PF L P
Sbjct: 173 GVIGPFSPLQP 183
>sp|Q9FGW0|FLA20_ARATH Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis
thaliana GN=FLA20 PE=3 SV=1
Length = 424
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 50/324 (15%)
Query: 66 ILSHLGFNELATAAPSLSNDAVATSWSGPSTLFAPSDSSLHTCFSCSVPSLL--REHLVP 123
+LS G+ + + D W TLFAPSD S PSLL + L P
Sbjct: 75 VLSDSGYLSMGLTLKLANQDLNLEDWQ-ELTLFAPSDQSFS---KFGQPSLLDMKYQLSP 130
Query: 124 GLFTIDYLRKLAFGTKIESLSPGRCITITSSKSENDTVSKVFIGGVEITHPDLFNNGIII 183
+ LR L G KI +L +T+T+S K I V + +F++G ++
Sbjct: 131 TRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFG---GKTSINNVVVQDSPVFDDGYVV 187
Query: 184 IHGIQGYISPLSPLSCDVERM-------------------TSLSFPFQPSDRGHHHQQIQ 224
I+G + + SP + ++ P P+ + +
Sbjct: 188 IYGSDEFFT--SPTKISDDSSSSSSIPSTTSSTGSIPIPSSATQTPPSPNIASDSTRNLP 245
Query: 225 TQ-QPIMRLMLRDAMLR-LRNNGYSILS--LAMKVKYQELINLANMTVFALDDVSI---- 276
+ +P+ R + ++ R L + G+ I++ LA++++ N +TVFA D +I
Sbjct: 246 NRSKPVNRFNIFESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPT 305
Query: 277 --FSGSYTYISNVRFHIIPNRYLTIGDLERL-PVGTTLPTLARGQSLTVTTAGGASVTAP 333
FS Y++ R H++ ++ L DL++ G+ L T+ +G + ++ +G
Sbjct: 306 TKFSD---YVTIFRGHVV-SQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDI----- 356
Query: 334 LRINYVRVKVPDVMKNLKIVVHGI 357
L +N V + PD+ N I VHG
Sbjct: 357 LLLNGVPLIYPDLYVNDWIAVHGF 380
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 96 TLFAPSDSSL---HTCFSCSVPSLLREHLVPGLFTIDYLRKLAF-GTKIESLSPGRCITI 151
T+FAP D ++ T FS V ++ R H+V L L+K A G+ ++++ G I I
Sbjct: 292 TVFAPIDEAIPNPTTKFSDYV-TIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEI 350
Query: 152 TSSKSENDTVSKVFIGGVEITHPDLFNNGIIIIHGIQGYI 191
+ S + + GV + +PDL+ N I +HG I
Sbjct: 351 SLSGD------ILLLNGVPLIYPDLYVNDWIAVHGFNQMI 384
>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana
GN=FLA19 PE=2 SV=2
Length = 248
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 96 TLFAPSDSSLHTC-FSCSVP---SLLREHLVPGLFTIDYLRKLAFGTKIESLSPGRCITI 151
TLFAP+DS L + S+P S LR H VP ++ LR L + + +L P + +
Sbjct: 70 TLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLL 129
Query: 152 TSSKSENDTVSKVFIGGVEITHPDLFNNGIIIIHGIQGYISPLSPLSCD--VERMTSLS 208
T S ND++ F+ GV++ P LF+ I +HG+ + +P S + VE T+L+
Sbjct: 130 TKHSSSNDSI---FLDGVQLLIPGLFDGQHIAVHGLADLLPLTAPSSPNRLVEDSTALA 185
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 224 QTQQPIMRLMLRDAMLRLRNNGYSILSLAMKVKYQELINLANMTVFALDDVSIFSGSYT- 282
T P+ L A+LR+R ++ +L++ ++T+FA D +F T
Sbjct: 27 STGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDESLTLFAPTDSMLFDLDMTH 86
Query: 283 ----YISNVRFHIIPNRYLTIGDLERLPVGTTLPTLARGQSLTVTTAGGASVTAPLRINY 338
Y+S +R H +P R L++ L LP ++LPTL L +T ++ + + ++
Sbjct: 87 SLPFYVSTLRLHSVPLR-LSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDS--IFLDG 143
Query: 339 VRVKVPDVMKNLKIVVHGI 357
V++ +P + I VHG+
Sbjct: 144 VQLLIPGLFDGQHIAVHGL 162
>sp|P0DH64|Y4891_SELML FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella
moellendorffii GN=SELMODRAFT_448915 PE=2 SV=1
Length = 260
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 284 ISNVRFHII--PNRYLTIGDLERLPVGTTLPTLARGQSLTVTTAGGASVTAPLRINYVRV 341
I+ +++H++ P + L R VG LPT+ +G+ +TVT+ + T +N V +
Sbjct: 125 INTLQYHVLTFPTSFEA---LSRNDVGAELPTMLQGEMITVTSNSPGNFT----LNEVNI 177
Query: 342 KVPDVMKNLK-IVVHGI 357
PDV + + I HGI
Sbjct: 178 THPDVCSSTRFIACHGI 194
>sp|Q42870|PLSC_LIMDO 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Limnanthes
douglasii GN=PLSC PE=2 SV=1
Length = 281
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 213 PSDRGHHHQQIQTQQPIMRLMLRDAMLRLRNNGYSILSLAMKVKYQELINLANMTVFALD 272
P +G H +Q+ PI+ ++L L R + + + + VKY IN + TV +D
Sbjct: 194 PFKKGFVHLALQSHLPIVPMILTGTHLAWRKGTFRVRPVPITVKYLPPINTDDWTVDKID 253
Query: 273 D 273
D
Sbjct: 254 D 254
>sp|Q42868|PLSC_LIMAL 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Limnanthes alba
PE=2 SV=1
Length = 281
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 213 PSDRGHHHQQIQTQQPIMRLMLRDAMLRLRNNGYSILSLAMKVKYQELINLANMTVFALD 272
P +G H +Q+ PI+ ++L L R + + + + VKY IN + TV +D
Sbjct: 194 PFKKGFVHLALQSHLPIVPMILTGTHLAWRKGTFRVRPVPITVKYLPPINTDDWTVDKID 253
Query: 273 D 273
D
Sbjct: 254 D 254
>sp|P25569|GID7_YEAST Glucose-induced degradation protein 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GID7 PE=1 SV=2
Length = 745
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 202 ERMTSLSFPFQPSDRGHHHQQIQTQQPIMRLMLRDAMLRLRNNGYSILSLAMKVKYQELI 261
+ MT +S P + +G H QQI Q ++ + L+D L++ + +I L K Q+
Sbjct: 602 KNMTCISLPLNTTHQGFHRQQISESQHLVLVSLQDNELQMWDYKENI--LIQKYFGQKQQ 659
Query: 262 NLANMTVFALDDVSIFSGS 280
+ + FA + + SGS
Sbjct: 660 HFIIRSCFAYGNKLVMSGS 678
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2
Length = 1475
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 288 RFHIIPNRYLTIGDLERLPVGTTLPTLARGQSLTVTTAGGASVTAPLRINYVRVKVPDVM 347
+FHI P +LTI D VGT R + + T G ASV+ L +N VPDV
Sbjct: 567 KFHISPEGFLTIND-----VGTA--DAGRYECVARNTIGYASVSMVLSVN-----VPDVS 614
Query: 348 KN 349
+N
Sbjct: 615 RN 616
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,380,183
Number of Sequences: 539616
Number of extensions: 6655416
Number of successful extensions: 23599
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 23561
Number of HSP's gapped (non-prelim): 46
length of query: 409
length of database: 191,569,459
effective HSP length: 120
effective length of query: 289
effective length of database: 126,815,539
effective search space: 36649690771
effective search space used: 36649690771
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)