Query 041192
Match_columns 161
No_of_seqs 177 out of 1084
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:27:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041192.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041192hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 2.1E-30 7.3E-35 189.6 11.2 112 27-143 39-150 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 5.9E-30 2E-34 189.0 12.1 105 31-143 56-161 (161)
3 3gla_A Low molecular weight he 100.0 6.8E-29 2.3E-33 169.6 13.9 98 29-131 2-99 (100)
4 4fei_A Heat shock protein-rela 99.9 1.4E-27 4.9E-32 163.8 10.9 96 27-132 2-97 (102)
5 3aab_A Putative uncharacterize 99.9 2E-27 6.9E-32 168.1 9.5 97 28-132 21-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 1.3E-25 4.4E-30 155.1 12.7 101 32-144 3-106 (106)
7 2wj5_A Heat shock protein beta 99.9 4.3E-25 1.5E-29 151.2 10.0 95 33-142 3-98 (101)
8 2klr_A Alpha-crystallin B chai 99.9 7.4E-24 2.5E-28 158.2 10.4 101 33-147 65-166 (175)
9 3q9p_A Heat shock protein beta 99.9 2.9E-23 1E-27 137.9 10.9 83 36-130 2-85 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 9.7E-23 3.3E-27 136.7 10.9 84 37-132 2-86 (90)
11 2bol_A TSP36, small heat shock 99.9 1.7E-22 5.9E-27 162.9 11.5 101 29-146 96-201 (314)
12 2bol_A TSP36, small heat shock 99.8 1E-20 3.5E-25 152.6 8.9 90 32-130 221-314 (314)
13 1rl1_A Suppressor of G2 allele 99.1 1.8E-10 6E-15 79.6 8.3 83 30-132 8-90 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 1.8E-10 6.2E-15 76.4 7.7 82 31-132 2-83 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.4 4E-07 1.4E-11 64.4 6.4 78 31-133 3-85 (134)
16 3eud_A Protein SHQ1; CS domain 98.4 5.4E-06 1.8E-10 56.8 10.7 80 28-132 14-98 (115)
17 3igf_A ALL4481 protein; two-do 98.4 1E-06 3.6E-11 72.4 7.9 72 32-130 298-370 (374)
18 1x5m_A Calcyclin-binding prote 98.2 3.7E-05 1.3E-09 53.7 11.2 83 30-132 19-105 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.1 2.5E-05 8.7E-10 55.3 9.2 92 30-132 18-113 (134)
20 1wgv_A KIAA1068 protein; CS do 98.0 0.00011 3.7E-09 51.1 11.5 86 27-132 15-103 (124)
21 3qor_A Nuclear migration prote 98.0 5.2E-05 1.8E-09 52.6 9.4 82 27-131 12-97 (121)
22 1wfi_A Nuclear distribution ge 97.9 3.9E-05 1.3E-09 53.9 7.5 82 27-131 3-88 (131)
23 1ejf_A Progesterone receptor P 97.8 0.00014 4.9E-09 50.6 8.7 78 33-131 5-82 (125)
24 2o30_A Nuclear movement protei 97.8 0.00023 8E-09 49.9 9.4 76 31-130 4-80 (131)
25 2rh0_A NUDC domain-containing 97.6 0.00039 1.3E-08 50.3 9.1 78 30-131 12-91 (157)
26 2kmw_A Uncharacterized protein 97.5 0.00031 1.1E-08 50.5 7.1 79 31-132 4-83 (150)
27 2cg9_X CO-chaperone protein SB 97.4 7E-05 2.4E-09 52.9 2.7 86 30-131 5-98 (134)
28 3q9p_A Heat shock protein beta 80.1 4.1 0.00014 25.5 5.2 33 97-130 8-40 (85)
29 3gla_A Low molecular weight he 79.0 7.3 0.00025 24.9 6.3 34 97-131 15-48 (100)
30 2y1y_A Alpha-crystallin B chai 76.1 4.7 0.00016 25.5 4.6 33 97-130 7-39 (90)
31 3l1e_A Alpha-crystallin A chai 73.6 6.5 0.00022 25.7 4.9 32 97-129 13-44 (106)
32 2wj5_A Heat shock protein beta 73.4 5.7 0.0002 25.7 4.6 33 97-130 12-44 (101)
33 4eld_A MJ16.5-P1, small heat s 73.4 21 0.00071 25.0 7.9 34 97-131 67-100 (161)
34 4fei_A Heat shock protein-rela 70.2 7.6 0.00026 25.1 4.6 33 42-75 62-95 (102)
35 2cql_A OK/SW-CL.103, 60S ribos 69.2 9.8 0.00033 24.9 5.0 21 54-75 20-40 (100)
36 3aab_A Putative uncharacterize 65.6 15 0.00051 24.5 5.5 35 96-131 34-69 (123)
37 1gme_A Heat shock protein 16.9 63.9 33 0.0011 23.7 7.2 34 97-131 54-88 (151)
38 1rl6_A Protein (ribosomal prot 63.0 16 0.00054 26.4 5.5 46 54-129 11-56 (177)
39 1nkw_E 50S ribosomal protein L 62.9 19 0.00064 26.9 6.0 21 54-75 39-59 (212)
40 3v2d_H 50S ribosomal protein L 60.5 12 0.00041 27.2 4.4 44 54-127 12-55 (180)
41 2nwt_A UPF0165 protein AF_2212 53.8 20 0.00069 21.9 4.0 19 111-129 3-21 (69)
42 2klr_A Alpha-crystallin B chai 53.7 17 0.00059 26.1 4.3 33 97-130 74-106 (175)
43 3u5e_H L8, RP24, YL11, 60S rib 51.2 44 0.0015 24.4 6.2 21 54-75 13-33 (191)
44 3j21_F 50S ribosomal protein L 48.7 22 0.00075 25.9 4.2 21 54-75 14-34 (184)
45 1vq8_E 50S ribosomal protein L 47.6 17 0.00059 26.3 3.5 47 54-129 9-55 (178)
46 3iz5_F 60S ribosomal protein L 46.1 50 0.0017 24.1 5.8 21 54-75 13-33 (190)
47 2zkr_e 60S ribosomal protein L 45.7 32 0.0011 25.2 4.7 27 48-75 7-33 (192)
48 4a17_E RPL9, 60S ribosomal pro 43.5 30 0.001 25.3 4.2 22 53-75 12-33 (188)
49 3bbo_I Ribosomal protein L6; l 43.3 10 0.00036 28.5 1.8 47 54-129 54-100 (223)
50 1rl1_A Suppressor of G2 allele 41.9 30 0.001 22.4 3.8 35 40-75 53-88 (114)
51 3qqz_A Putative uncharacterize 38.3 1.2E+02 0.0043 22.7 7.9 65 48-125 21-86 (255)
52 1ew4_A CYAY protein; friedreic 36.0 22 0.00074 23.5 2.3 17 112-128 29-45 (106)
53 2o30_A Nuclear movement protei 35.7 84 0.0029 21.0 5.4 31 96-126 14-44 (131)
54 1n91_A ORF, hypothetical prote 32.0 85 0.0029 20.7 4.7 38 36-75 8-46 (108)
55 3r8s_G 50S ribosomal protein L 31.3 25 0.00086 25.3 2.1 21 54-75 11-31 (176)
56 2gjh_A Designed protein; oblig 31.0 38 0.0013 19.3 2.4 22 53-75 31-52 (62)
57 3oeq_A Frataxin homolog, mitoc 30.7 40 0.0014 22.9 3.0 16 113-128 49-64 (123)
58 1q5l_A Chaperone protein DNAK; 28.6 1.1E+02 0.0038 20.5 5.1 31 112-145 99-132 (135)
59 2hyk_A Beta-1,3-glucanase; fam 26.3 65 0.0022 23.8 3.8 48 54-107 49-99 (245)
60 1wgv_A KIAA1068 protein; CS do 25.4 1.5E+02 0.005 19.5 5.2 33 95-127 28-61 (124)
61 2ks0_A Uncharacterized protein 24.5 53 0.0018 20.0 2.4 23 51-74 17-39 (71)
62 4awd_A Beta-porphyranase; hydr 24.5 1.4E+02 0.0049 23.3 5.6 51 53-107 85-145 (324)
63 2rh0_A NUDC domain-containing 24.4 1.8E+02 0.0061 20.1 6.1 33 95-127 22-54 (157)
64 2kgs_A Uncharacterized protein 24.4 46 0.0016 22.5 2.4 26 49-75 2-27 (132)
65 3d33_A Domain of unknown funct 24.0 1.6E+02 0.0053 19.3 4.9 35 99-143 22-56 (108)
66 3t3l_A Frataxin, mitochondrial 23.2 54 0.0018 22.4 2.5 17 111-127 40-56 (129)
67 1nvp_C Transcription initiatio 22.2 39 0.0013 21.0 1.5 15 110-124 46-60 (76)
68 3dob_A Heat shock 70 kDa prote 22.1 2E+02 0.0067 19.7 5.5 48 95-146 65-116 (152)
69 2uwa_A Cellulase; glycoside hy 21.1 1.9E+02 0.0065 21.9 5.6 43 53-107 31-74 (274)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.97 E-value=2.1e-30 Score=189.58 Aligned_cols=112 Identities=49% Similarity=0.793 Sum_probs=99.1
Q ss_pred CCCccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCC
Q 041192 27 QTLALATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPM 106 (161)
Q Consensus 27 ~~~~~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~ 106 (161)
...+.|++||++++++|+|.++|||++++||+|++.+++.|+|+|++.. +...+...|+++||.+|.|.|+|.||.
T Consensus 39 ~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~----~~~~~~~~~~~~Er~~g~F~R~~~LP~ 114 (151)
T 1gme_A 39 AAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTK----EKEDKNDKWHRVERSSGKFVRRFRLLE 114 (151)
T ss_dssp HHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCC----CCCCTTCEEEECCCCCCCEEEEEECSS
T ss_pred ccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcc----ccccCCceEEEEeEeccEEEEEEECCC
Confidence 4566799999999999999999999999999999954389999999887 455567899999999999999999999
Q ss_pred CcccCCeeEEEeCCEEEEEEeCcCccccCCCeEEEec
Q 041192 107 SADLEHVKAHQENGVLRITVPKLAEEKKRQPNVINID 143 (161)
Q Consensus 107 ~vd~~~i~A~~~nGiL~I~~pK~~~~~~~~~~~I~I~ 143 (161)
+||.+.|+|+|+||+|+|++||..+.+ .+.++|+|+
T Consensus 115 ~vd~~~i~A~~~nGvL~I~lPK~~~~~-~~~~~I~I~ 150 (151)
T 1gme_A 115 DAKVEEVKAGLENGVLTVTVPKAEVKK-PEVKAIQIS 150 (151)
T ss_dssp CCCGGGCEEEEETTEEEEEEECCCCCT-TCCCCCCCC
T ss_pred CccccceEEEEECCEEEEEEEccCcCC-CCCeEeeeC
Confidence 999999999999999999999988753 235677775
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.97 E-value=5.9e-30 Score=188.98 Aligned_cols=105 Identities=23% Similarity=0.344 Sum_probs=96.1
Q ss_pred cceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEee-eeeEEEEEEECCCCcc
Q 041192 31 LATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAER-ISGKFWRQFKMPMSAD 109 (161)
Q Consensus 31 ~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~-~~g~f~r~~~LP~~vd 109 (161)
.+++||++++++|+|.++|||++++||+|++.+ +.|+|+|++.. +...+..+|+++|| .+|.|.|+|.||.+||
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~----~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd 130 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSP----LMITESERIIYSEIPEEEEIYRTIKLPATVK 130 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCC----CCCCSSCEEEEECSCCCCEEEEEEECSSCBC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcc----cccCCCceEEEEEeeccccEEEEEECCCCcc
Confidence 345999999999999999999999999999999 89999999887 44556678999999 9999999999999999
Q ss_pred cCCeeEEEeCCEEEEEEeCcCccccCCCeEEEec
Q 041192 110 LEHVKAHQENGVLRITVPKLAEEKKRQPNVINID 143 (161)
Q Consensus 110 ~~~i~A~~~nGiL~I~~pK~~~~~~~~~~~I~I~ 143 (161)
.++|+|+|+||+|+|++||.... ++|+|+|+
T Consensus 131 ~~~i~A~~~nGvL~I~lpK~~~~---~~r~I~Ie 161 (161)
T 4eld_A 131 EENASAKFENGVLSVILPKAESS---IKKGINIE 161 (161)
T ss_dssp GGGCEEEEETTEEEEEEEBCGGG---SCCCCCCC
T ss_pred cccEEEEEECCEEEEEEEcCCCC---CCcEeecC
Confidence 99999999999999999998876 57889885
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=6.8e-29 Score=169.63 Aligned_cols=98 Identities=33% Similarity=0.593 Sum_probs=91.3
Q ss_pred CccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCc
Q 041192 29 LALATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSA 108 (161)
Q Consensus 29 ~~~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 108 (161)
.+.|++||++++++|+|.++|||++++||+|++.+ +.|+|+|++.. +...+...|+++|+.+|.|.|+|.||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~----~~~~~~~~~~~~er~~g~f~r~~~LP~~v 76 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKS----ESSTETERFSRIERRYGSFHRRFALPDSA 76 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECC----GGGSSGGGEEEECCCCEEEEEEEECCTTB
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcC----cCccCCccEEEEeecceEEEEEEECCCCc
Confidence 46799999999999999999999999999999999 99999999988 55667789999999999999999999999
Q ss_pred ccCCeeEEEeCCEEEEEEeCcCc
Q 041192 109 DLEHVKAHQENGVLRITVPKLAE 131 (161)
Q Consensus 109 d~~~i~A~~~nGiL~I~~pK~~~ 131 (161)
|.+.|+|+|+||+|+|++||...
T Consensus 77 d~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 77 DADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CTTSCEEEEETTEEEEEEEBC--
T ss_pred ChHHeEEEEeCCEEEEEEecCCC
Confidence 99999999999999999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.95 E-value=1.4e-27 Score=163.79 Aligned_cols=96 Identities=30% Similarity=0.432 Sum_probs=89.2
Q ss_pred CCCccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCC
Q 041192 27 QTLALATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPM 106 (161)
Q Consensus 27 ~~~~~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~ 106 (161)
.+.+.|++||+++++.|+|.++|||++++||+|++.+ +.|+|+|++.. ..+|+++||.+|.|.|+|.||.
T Consensus 2 ~g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~---------~~~~~~~er~~g~f~R~~~LP~ 71 (102)
T 4fei_A 2 GGPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG---------TEHLLRSERPSGRFVRELAFPE 71 (102)
T ss_dssp CEECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC---------CSSCSSCCSEEEEEEEEEECSS
T ss_pred CCcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec---------CCCEEEEEEeccEEEEEEECCC
Confidence 3567899999999999999999999999999999999 89999999854 2578889999999999999999
Q ss_pred CcccCCeeEEEeCCEEEEEEeCcCcc
Q 041192 107 SADLEHVKAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 107 ~vd~~~i~A~~~nGiL~I~~pK~~~~ 132 (161)
++|.+.++|+|+||+|+|++||..+.
T Consensus 72 ~vd~~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 72 PVRPASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp CBCTTCCEEEEETTEEEEEEEBSSCC
T ss_pred CcchhHcEEEEECCEEEEEEEccCcc
Confidence 99999999999999999999998865
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=2e-27 Score=168.15 Aligned_cols=97 Identities=22% Similarity=0.324 Sum_probs=89.3
Q ss_pred CCccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCC
Q 041192 28 TLALATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMS 107 (161)
Q Consensus 28 ~~~~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 107 (161)
..+.|++||++++++|+|.++|||++++||+|++.+++.|+|+|++.. +. +.+|+++||.+ .|.|+|.||.+
T Consensus 21 ~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~----~~---~~~~~~~Er~~-~f~R~~~LP~~ 92 (123)
T 3aab_A 21 ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI----TE---PGVKYLTQRPK-YVRKVIRLPYN 92 (123)
T ss_dssp HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCC----CC---CSCEEEECSCS-EEEEEEECSSE
T ss_pred ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec----cC---CCeEEEEEEeE-EEEEEEECCCC
Confidence 345699999999999999999999999999999987578999999877 22 67899999999 99999999999
Q ss_pred cccCCe-eEEEeCCEEEEEEeCcCcc
Q 041192 108 ADLEHV-KAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 108 vd~~~i-~A~~~nGiL~I~~pK~~~~ 132 (161)
+|.++| +|+|+||+|+|++||....
T Consensus 93 vd~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 93 VAKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp ECTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred cCcchhCeeEEcCCEEEEEEEcCCCC
Confidence 999999 9999999999999998765
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=1.3e-25 Score=155.10 Aligned_cols=101 Identities=16% Similarity=0.397 Sum_probs=86.8
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccC
Q 041192 32 ATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLE 111 (161)
Q Consensus 32 p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 111 (161)
...+|++++++|+|.++||||+++||+|++.+ +.|+|+|++.. . .....|+++ .|.|+|.||.+||.+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~-----eF~R~~~LP~~vd~~ 70 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNE----R--QDDHGYISR-----EFHRRYRLPSNVDQS 70 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ETTTEEEEE-----EEEEEEECCTTBCTT
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----c--cCCCCEEEE-----EEEEEEECCCCcChh
Confidence 56899999999999999999999999999999 99999999765 2 223445544 499999999999999
Q ss_pred CeeEEE-eCCEEEEEEeCcCccc--cCCCeEEEecC
Q 041192 112 HVKAHQ-ENGVLRITVPKLAEEK--KRQPNVINIDE 144 (161)
Q Consensus 112 ~i~A~~-~nGiL~I~~pK~~~~~--~~~~~~I~I~~ 144 (161)
+|+|+| +||+|+|++||..+.. ..++|+|+|++
T Consensus 71 ~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 71 ALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp SCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred HcEEEECCCCEEEEEEEccCcccccCCCCeEeeecC
Confidence 999999 8999999999998753 24688999863
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=4.3e-25 Score=151.21 Aligned_cols=95 Identities=16% Similarity=0.290 Sum_probs=81.5
Q ss_pred eeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCC
Q 041192 33 TADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEH 112 (161)
Q Consensus 33 ~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 112 (161)
.+||++++++|.|.++||||+++||+|++.+ +.|+|+|++.. .. +...|+++| |.|+|.||.+||.+.
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~~--~~~~~~~~e-----F~R~~~LP~~vd~~~ 70 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEE----RP--DEHGFIARE-----FHRRYRLPPGVDPAA 70 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----CS--STTCCEEEE-----EEEEEECCTTBCTTC
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----cc--CCCCEEEEE-----EEEEEECCCCcChhH
Confidence 5799999999999999999999999999999 89999999876 22 334566554 999999999999999
Q ss_pred eeEEE-eCCEEEEEEeCcCccccCCCeEEEe
Q 041192 113 VKAHQ-ENGVLRITVPKLAEEKKRQPNVINI 142 (161)
Q Consensus 113 i~A~~-~nGiL~I~~pK~~~~~~~~~~~I~I 142 (161)
|+|+| +||+|+|++||.... +++.+.|
T Consensus 71 i~A~~s~nGvL~I~lPK~~~~---~~~~~~i 98 (101)
T 2wj5_A 71 VTSALSPEGVLSIQATPASAQ---ASLPSPP 98 (101)
T ss_dssp CEEEECTTSEEEEEECBCCCC---CSSCC--
T ss_pred CEEEECCCCEEEEEEECCCcC---CCCCCcc
Confidence 99999 899999999999876 3444544
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.90 E-value=7.4e-24 Score=158.16 Aligned_cols=101 Identities=18% Similarity=0.385 Sum_probs=73.4
Q ss_pred eeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCC
Q 041192 33 TADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEH 112 (161)
Q Consensus 33 ~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 112 (161)
.++|++++++|+|.++||||+++||+|++.+ +.|+|+|++.. +. ++.+|+++| |.|+|.||.+||.++
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~----~~--~~~~~~~re-----F~R~~~LP~~Vd~~~ 132 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----RQ--DEHGFISRE-----FHRKYRIPADVDPLT 132 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEE----EE--ETTEEEEEE-----EEEEEECTTTCCTTT
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----cc--cCCceEEEE-----EEEEEECCCCcChhH
Confidence 4799999999999999999999999999999 89999999876 22 334566554 999999999999999
Q ss_pred eeEEE-eCCEEEEEEeCcCccccCCCeEEEecCCCC
Q 041192 113 VKAHQ-ENGVLRITVPKLAEEKKRQPNVINIDEESG 147 (161)
Q Consensus 113 i~A~~-~nGiL~I~~pK~~~~~~~~~~~I~I~~~~~ 147 (161)
|+|+| +||+|+|++||.... ...|+|+|+.++.
T Consensus 133 i~A~~s~dGvL~I~lPK~~~~--~~~r~I~I~~~~~ 166 (175)
T 2klr_A 133 ITSSLSSDGVLTVNGPRKQVS--GPERTIPITREEK 166 (175)
T ss_dssp CEEEECTTSCEEEEEECC------------------
T ss_pred eEEEEcCCCEEEEEEECCCCC--CCCeEEEEecCCc
Confidence 99999 799999999998754 2458999987643
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=2.9e-23 Score=137.87 Aligned_cols=83 Identities=19% Similarity=0.390 Sum_probs=70.1
Q ss_pred EEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeE
Q 041192 36 WMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKA 115 (161)
Q Consensus 36 i~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A 115 (161)
+.|++++|.|.++||||+++||+|++.+ +.|+|+|++.. ... ... ..+|.|.|+|.||.+||.++|+|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~~~--~~~-----~~~~~F~R~~~LP~~vd~~~i~A 69 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAA----RQD--EHG-----YISRCFTRKYTLPPGVDPTQVSS 69 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC------------------CCCEEEEEEEECCTTCCGGGCEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcc----ccC--CCC-----EEEEEEEEEEECCCCcChHHcEE
Confidence 4688999999999999999999999999 89999999876 221 112 24678999999999999999999
Q ss_pred EEe-CCEEEEEEeCcC
Q 041192 116 HQE-NGVLRITVPKLA 130 (161)
Q Consensus 116 ~~~-nGiL~I~~pK~~ 130 (161)
+|. ||+|+|++||.+
T Consensus 70 ~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 70 SLSPEGTLTVEAPMPK 85 (85)
T ss_dssp EECTTSEEEEEEECCC
T ss_pred EECCCCEEEEEEEcCC
Confidence 998 999999999963
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=9.7e-23 Score=136.68 Aligned_cols=84 Identities=17% Similarity=0.409 Sum_probs=69.7
Q ss_pred EEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeEE
Q 041192 37 METPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKAH 116 (161)
Q Consensus 37 ~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~ 116 (161)
.+++++|+|.++|||++++||+|++.+ +.|+|+|++.. . .+...|+++ .|.|+|.||.+||.+.|+|+
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~----~--~~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~ 69 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEE----R--QDEHGFISR-----EFHRKYRIPADVDPLTITSS 69 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEE----E--ECSSSEEEE-----EEEEEEECCTTBCGGGCEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEec----c--cCCCCEEEE-----EEEEEEECCCCcChhHcEEE
Confidence 367899999999999999999999999 89999999876 2 234566655 49999999999999999999
Q ss_pred E-eCCEEEEEEeCcCcc
Q 041192 117 Q-ENGVLRITVPKLAEE 132 (161)
Q Consensus 117 ~-~nGiL~I~~pK~~~~ 132 (161)
| +||+|+|++||....
T Consensus 70 ~~~~GvL~I~~pK~~~~ 86 (90)
T 2y1y_A 70 MSSDGVLTVNGPRKQVS 86 (90)
T ss_dssp ECTTSEEEEEECBC---
T ss_pred ECCCCEEEEEEEcCCCC
Confidence 9 899999999998876
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.88 E-value=1.7e-22 Score=162.90 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=87.4
Q ss_pred CccceeeEEEcCC----EEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEEC
Q 041192 29 LALATADWMETPT----AHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKM 104 (161)
Q Consensus 29 ~~~p~~di~e~~~----~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~L 104 (161)
.+.|++||+|+++ +|+|.++||||+++||+|++.+ +.|+|+|++.. +.. . ++.+|.|.|+|.|
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~----~~e--~------~r~~g~F~R~~~L 162 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSV----ACG--D------AAMSESVGRSIPL 162 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBS----STT--C------CCBCCCEEEEEEC
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEec----cCC--C------CEEEEEEEEEEEC
Confidence 4679999999999 9999999999999999999999 99999999876 222 1 1678999999999
Q ss_pred CCCcccCCeeEEEe-CCEEEEEEeCcCccccCCCeEEEecCCC
Q 041192 105 PMSADLEHVKAHQE-NGVLRITVPKLAEEKKRQPNVINIDEES 146 (161)
Q Consensus 105 P~~vd~~~i~A~~~-nGiL~I~~pK~~~~~~~~~~~I~I~~~~ 146 (161)
|.+||.++|+|+|+ ||+|+|++||..+. .+.|.|...+
T Consensus 163 P~~Vd~e~i~A~~~~nGVL~I~lPK~~~~----~~~I~it~~~ 201 (314)
T 2bol_A 163 PPSVDRNHIQATITTDDVLVIEAPVNEPN----YKAIKLSPEK 201 (314)
T ss_dssp CTTBCGGGCEEEECSSSEEEEEEEBSSCC----TTTEEEETTT
T ss_pred CCCccccccEEEEeCCCEEEEEEeccCcc----cceeecccCC
Confidence 99999999999999 99999999998865 2346665543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=1e-20 Score=152.56 Aligned_cols=90 Identities=17% Similarity=0.295 Sum_probs=71.4
Q ss_pred ceeeEEEcC---CEEEEEEEc-CCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCC
Q 041192 32 ATADWMETP---TAHVITLDI-PGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMS 107 (161)
Q Consensus 32 p~~di~e~~---~~y~i~v~L-PG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~ 107 (161)
..++|.+++ +.|.|.++| ||++++||+|++.+ +.|+|+|+++. +. ..++++|+.+|.|.|+|.||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~----~~----~~~~~~Er~~g~F~R~~~LP~~ 291 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGK----EE----KTENASHSEHREFYKAFVTPEV 291 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC--------------------CEEEEEEEECSSE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEec----cC----CceEEEEEeeeEEEEEEECCCC
Confidence 446776655 578999999 99999999999999 89999999877 22 2578899999999999999999
Q ss_pred cccCCeeEEEeCCEEEEEEeCcC
Q 041192 108 ADLEHVKAHQENGVLRITVPKLA 130 (161)
Q Consensus 108 vd~~~i~A~~~nGiL~I~~pK~~ 130 (161)
||.++|+|+|+||||+|++||.+
T Consensus 292 vd~~~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 292 VDASKTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp ECGGGCEEEEETTEEEEEEEEEC
T ss_pred cChHHeEEEEeCCEEEEEEecCC
Confidence 99999999999999999999963
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.14 E-value=1.8e-10 Score=79.61 Aligned_cols=83 Identities=23% Similarity=0.251 Sum_probs=73.1
Q ss_pred ccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcc
Q 041192 30 ALATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSAD 109 (161)
Q Consensus 30 ~~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 109 (161)
..|.++|+++++.+.|.+.|||+.++++.|.+.+ +.|.|++.... -..|...+.|+..|+
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~-------------------~~~y~~~~~L~~~I~ 67 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS-------------------GEDYNLKLELLHPII 67 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT-------------------SSEEEEEECBSSCCC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC-------------------CcEEEEEeeCCCcCC
Confidence 3478999999999999999999999999999999 88999976432 025778899999999
Q ss_pred cCCeeEEEeCCEEEEEEeCcCcc
Q 041192 110 LEHVKAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 110 ~~~i~A~~~nGiL~I~~pK~~~~ 132 (161)
++..++++.+|.|+|+|+|..+.
T Consensus 68 ~e~s~~~~~~~~l~i~L~K~~~~ 90 (114)
T 1rl1_A 68 PEQSTFKVLSTKIEIKLKKPEAV 90 (114)
T ss_dssp GGGEEEEECSSSEEEEEECSSCC
T ss_pred ccccEEEEECCEEEEEEEcCCCC
Confidence 99999999999999999998754
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.13 E-value=1.8e-10 Score=76.40 Aligned_cols=82 Identities=18% Similarity=0.211 Sum_probs=72.1
Q ss_pred cceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCccc
Q 041192 31 LATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADL 110 (161)
Q Consensus 31 ~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~ 110 (161)
.|.++|+++.+.+.|.+.+||+.++++.|.+++ +.|.|++.... -..|...+.|+..|++
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~-------------------~~~y~~~~~L~~~I~~ 61 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG-------------------EDAYYLQPRLFGKIIP 61 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT-------------------SCCEEECCBBSSCBCG
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC-------------------CcEEEEeeEcCCccCc
Confidence 478999999999999999999999999999999 88999975422 0247788899999999
Q ss_pred CCeeEEEeCCEEEEEEeCcCcc
Q 041192 111 EHVKAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 111 ~~i~A~~~nGiL~I~~pK~~~~ 132 (161)
+..++++.+|.|+|+|+|..+.
T Consensus 62 ~~s~~~~~~~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 62 DKCKYEVLSTKIEICLAKADII 83 (92)
T ss_dssp GGCEEEECSSCEEEEEEBSSSC
T ss_pred hhEEEEEECCEEEEEEEcCCCC
Confidence 9999999999999999998653
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.45 E-value=4e-07 Score=64.40 Aligned_cols=78 Identities=14% Similarity=0.263 Sum_probs=68.2
Q ss_pred cceeeEEEcCCEEEEEEEcCCCC--CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCc
Q 041192 31 LATADWMETPTAHVITLDIPGMK--KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSA 108 (161)
Q Consensus 31 ~p~~di~e~~~~y~i~v~LPG~~--~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 108 (161)
-|...+..+++..+|.+.+|..+ .+++++.+.+ ..+.+... .|..++.||..|
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~------------------------PYyLRL~LP~~V 57 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS------------------------PYYLRLRFPHEL 57 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS------------------------SSCEEECCSSCE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC------------------------CeEEEecCCCee
Confidence 37889999999999999999999 8999999999 88877722 466789999999
Q ss_pred -ccCCeeEEEe--CCEEEEEEeCcCccc
Q 041192 109 -DLEHVKAHQE--NGVLRITVPKLAEEK 133 (161)
Q Consensus 109 -d~~~i~A~~~--nGiL~I~~pK~~~~~ 133 (161)
|.+..+|+|+ .|.|+|++||..+.+
T Consensus 58 ~e~~~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 58 IDDERSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp ECCSSCEEEEETTTTEEEEEEEESSTTC
T ss_pred ecCCCcceeEeccCCEEEEEEeCCCCCC
Confidence 8888999995 899999999988763
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.38 E-value=5.4e-06 Score=56.84 Aligned_cols=80 Identities=14% Similarity=0.260 Sum_probs=68.5
Q ss_pred CCccceeeEEEcCCEEEEEEEcCCCC--CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECC
Q 041192 28 TLALATADWMETPTAHVITLDIPGMK--KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMP 105 (161)
Q Consensus 28 ~~~~p~~di~e~~~~y~i~v~LPG~~--~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP 105 (161)
...-|...|..+++..+|.+.+|.++ ..++++.+.+ ..+....+ .|..++.||
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~------------------------PYyLRL~lP 68 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS------------------------PYYLRLRFP 68 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET------------------------TEEEEEECS
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC------------------------CeEEEEecC
Confidence 34558999999999999999999877 7899999999 87777722 477889999
Q ss_pred CCc-ccCCeeEEEe--CCEEEEEEeCcCcc
Q 041192 106 MSA-DLEHVKAHQE--NGVLRITVPKLAEE 132 (161)
Q Consensus 106 ~~v-d~~~i~A~~~--nGiL~I~~pK~~~~ 132 (161)
..+ +.+.-+|+|+ +|.++|++||..+.
T Consensus 69 ~~vved~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 69 HELIDDERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp SCEECSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred cceecCCCcceEEeCCCcEEEEEEcCCcCC
Confidence 998 7777899995 89999999999876
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.36 E-value=1e-06 Score=72.39 Aligned_cols=72 Identities=19% Similarity=0.201 Sum_probs=61.0
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccC
Q 041192 32 ATADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLE 111 (161)
Q Consensus 32 p~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~ 111 (161)
+++.|... .|.+++.|||+++++|++.-.+ +.|+|+ .|.|+|.|.||..+...
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~------------------------~g~~rR~i~LP~~L~~~ 350 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVE------------------------AGDQRRNIFLPPALSGR 350 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEE------------------------ETTEEEEEECCTTTTTC
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEE------------------------ECCEeecccCCHHHcCC
Confidence 45555444 8999999999999999999998 899999 56799999999998666
Q ss_pred C-eeEEEeCCEEEEEEeCcC
Q 041192 112 H-VKAHQENGVLRITVPKLA 130 (161)
Q Consensus 112 ~-i~A~~~nGiL~I~~pK~~ 130 (161)
. ..|+|+||.|.|.+-...
T Consensus 351 ~v~~A~~~~~~L~i~~~~~~ 370 (374)
T 3igf_A 351 PITGAKFQNNYLIISFLEHH 370 (374)
T ss_dssp CEEEEEEETTEEEEEECCC-
T ss_pred CccccEEECCEEEEEEehhc
Confidence 5 669999999999986554
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=3.7e-05 Score=53.72 Aligned_cols=83 Identities=11% Similarity=0.203 Sum_probs=69.7
Q ss_pred ccceeeEEEcCCEEEEEEEcCCC---CCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEE-CC
Q 041192 30 ALATADWMETPTAHVITLDIPGM---KKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFK-MP 105 (161)
Q Consensus 30 ~~p~~di~e~~~~y~i~v~LPG~---~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~-LP 105 (161)
..+.++|+++.+...|.+.|||+ .++++.|.+.. +.|.|.+.... + ..|.-.+. |-
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~---------~----------~~y~~~~~~L~ 78 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN---------G----------KSYSMIVNNLL 78 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS---------S----------SCEEEEEECBS
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC---------C----------CcEEEEhHHhc
Confidence 45789999999999999999999 89999999999 88999864221 0 13666775 99
Q ss_pred CCcccCCeeEEEeCCEEEEEEeCcCcc
Q 041192 106 MSADLEHVKAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 106 ~~vd~~~i~A~~~nGiL~I~~pK~~~~ 132 (161)
..|+++.-+.+...+.++|+|-|..+.
T Consensus 79 ~~I~~e~S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 79 KPISVEGSSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp SCCCTTTCEEEEETTEEEEEEECSSSS
T ss_pred CccCcccCEEEEeCCEEEEEEEECCCC
Confidence 999999988889999999999998753
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.08 E-value=2.5e-05 Score=55.28 Aligned_cols=92 Identities=16% Similarity=0.176 Sum_probs=71.1
Q ss_pred ccceeeEEEc-CCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeee---EEEEEEECC
Q 041192 30 ALATADWMET-PTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISG---KFWRQFKMP 105 (161)
Q Consensus 30 ~~p~~di~e~-~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g---~f~r~~~LP 105 (161)
..+.++|+++ .+...|.|.++++.++++.|.+.. +.|.|...... ... .+.....| .|.-.+.|-
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~----~~~------l~~~~a~g~~~~y~~~~~L~ 86 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRD----GNF------LRLHPGCGPHTTFRWQVKLR 86 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCC----HHH------HHHSTTCCTTSCEEEEEEBS
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCC----Ccc------cccccccCcceeEEEecccc
Confidence 3588999999 999999999999999999999999 88999865332 000 00000001 466778899
Q ss_pred CCcccCCeeEEEeCCEEEEEEeCcCcc
Q 041192 106 MSADLEHVKAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 106 ~~vd~~~i~A~~~nGiL~I~~pK~~~~ 132 (161)
..|+++.-+.++..+-+.|+|.|....
T Consensus 87 ~~I~pe~S~~~v~~~kIeI~L~K~e~~ 113 (134)
T 1wh0_A 87 NLIEPEQCTFCFTASRIDICLRKRQSQ 113 (134)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEESSSC
T ss_pred ccCCchhCEEEEeCCEEEEEEEECCCC
Confidence 999999988888899999999998654
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.03 E-value=0.00011 Score=51.12 Aligned_cols=86 Identities=16% Similarity=0.229 Sum_probs=69.7
Q ss_pred CCCccceeeEEEcCCEEEEEEEcC-CC-CCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEEC
Q 041192 27 QTLALATADWMETPTAHVITLDIP-GM-KKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKM 104 (161)
Q Consensus 27 ~~~~~p~~di~e~~~~y~i~v~LP-G~-~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~L 104 (161)
.+...|.+.|.++.+...|++.|| |+ +.+||.|.+.. +.|.|.++... +. .+.-...|
T Consensus 15 nG~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~~---------~~----------~~~~~~~L 74 (124)
T 1wgv_A 15 NGAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEEN---------GE----------RVLMEGKL 74 (124)
T ss_dssp SSBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECSS---------SE----------EEEEEEEB
T ss_pred CCCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEccC---------CC----------ceEEcccc
Confidence 556678999999999999999999 87 89999999999 89999865311 00 12345679
Q ss_pred CCCcccCCeeEEEeCCE-EEEEEeCcCcc
Q 041192 105 PMSADLEHVKAHQENGV-LRITVPKLAEE 132 (161)
Q Consensus 105 P~~vd~~~i~A~~~nGi-L~I~~pK~~~~ 132 (161)
...|+++.-...++++- |.|+|-|....
T Consensus 75 ~~~I~~e~S~w~i~~~k~v~i~L~K~~~~ 103 (124)
T 1wgv_A 75 THKINTESSLWSLEPGKCVLVNLSKVGEY 103 (124)
T ss_dssp SSCBCTTTCEEEECTTSEEEEEECBSSSC
T ss_pred cCcCCCcCCEEEEeCCCEEEEEEEECCCC
Confidence 99999999888998874 99999998643
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=98.00 E-value=5.2e-05 Score=52.60 Aligned_cols=82 Identities=16% Similarity=0.242 Sum_probs=67.6
Q ss_pred CCCccceeeEEEcCCEEEEEEEcC-C--CCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEE
Q 041192 27 QTLALATADWMETPTAHVITLDIP-G--MKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFK 103 (161)
Q Consensus 27 ~~~~~p~~di~e~~~~y~i~v~LP-G--~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~ 103 (161)
.+...|.+.|.++.+...|++.|| | ++..||.|.+.. +.|.|..+-.. +.-...
T Consensus 12 nG~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~~----------------------~~~~g~ 68 (121)
T 3qor_A 12 NGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQP----------------------AIIDGE 68 (121)
T ss_dssp SSCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTSC----------------------CSEEEE
T ss_pred CCCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCcc----------------------eEEecc
Confidence 566779999999999999999999 4 789999999999 88888642111 122457
Q ss_pred CCCCcccCCeeEEEeCC-EEEEEEeCcCc
Q 041192 104 MPMSADLEHVKAHQENG-VLRITVPKLAE 131 (161)
Q Consensus 104 LP~~vd~~~i~A~~~nG-iL~I~~pK~~~ 131 (161)
|...|+++.-...+++| .|.|+|-|...
T Consensus 69 L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 69 LYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp BSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred ccccccccccEEEEcCCCEEEEEEEECCC
Confidence 89999999988999998 99999999865
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.91 E-value=3.9e-05 Score=53.89 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=67.2
Q ss_pred CCCccceeeEEEcCCEEEEEEEcC-C--CCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEE
Q 041192 27 QTLALATADWMETPTAHVITLDIP-G--MKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFK 103 (161)
Q Consensus 27 ~~~~~p~~di~e~~~~y~i~v~LP-G--~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~ 103 (161)
.+...|.+.|.++.+...|.+.|| | ++..++.|.+.. +.|.|..+ . . . +.-...
T Consensus 3 ng~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~k--g----~------~----------~~~~~~ 59 (131)
T 1wfi_A 3 SGSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLK--G----Q------P----------PVVDGE 59 (131)
T ss_dssp CSSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEET--T----S------C----------CSBCSC
T ss_pred CCCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEEC--C----c------e----------EEEecc
Confidence 355668999999999999999999 6 899999999999 89999853 1 0 0 112345
Q ss_pred CCCCcccCCeeEEEeCC-EEEEEEeCcCc
Q 041192 104 MPMSADLEHVKAHQENG-VLRITVPKLAE 131 (161)
Q Consensus 104 LP~~vd~~~i~A~~~nG-iL~I~~pK~~~ 131 (161)
|...|+++.-..++.+| .|.|+|-|..+
T Consensus 60 L~~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 60 LYNEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp BSSCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccccCEEEEcCCCEEEEEEEECCC
Confidence 88899999988899998 89999999875
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.79 E-value=0.00014 Score=50.58 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=66.0
Q ss_pred eeeEEEcCCEEEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCC
Q 041192 33 TADWMETPTAHVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEH 112 (161)
Q Consensus 33 ~~di~e~~~~y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~ 112 (161)
.++++++.+...|+|.||+. +++.|.++. +.|.+++.... ++ ..|.-.+.|-..|+++.
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~--------~~----------~~y~~~l~L~~~I~~e~ 63 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGS--------DN----------FKHLNEIDLFHCIDPND 63 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETT--------TT----------EEEEEEEEBSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCC--------CC----------ceEEEEEEccceecccc
Confidence 79999999999999999996 699999999 89999876422 00 13667888999999999
Q ss_pred eeEEEeCCEEEEEEeCcCc
Q 041192 113 VKAHQENGVLRITVPKLAE 131 (161)
Q Consensus 113 i~A~~~nGiL~I~~pK~~~ 131 (161)
.+.+..+.-+.|+|.|..+
T Consensus 64 S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 64 SKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEEECSSCEEEEEEESST
T ss_pred CEEEECCCEEEEEEEECCC
Confidence 8888888899999999864
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.76 E-value=0.00023 Score=49.90 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=62.0
Q ss_pred cceeeEEEcCCEEEEEEEcC-CCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcc
Q 041192 31 LATADWMETPTAHVITLDIP-GMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSAD 109 (161)
Q Consensus 31 ~p~~di~e~~~~y~i~v~LP-G~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 109 (161)
-|.+.|..+.+...|.|.|| |++.+++.|.+.. +.|.|.++ . . . .-...|...|+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--g----------~----------~-~~~~~L~~~I~ 59 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--G----------E----------I-VIDGELLHEVD 59 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--T----------E----------E-EEEEEBSSCEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--C----------E----------e-eEccccccccc
Confidence 37899999999999999996 8999999999999 89999842 1 0 1 23457899999
Q ss_pred cCCeeEEEeCCEEEEEEeCcC
Q 041192 110 LEHVKAHQENGVLRITVPKLA 130 (161)
Q Consensus 110 ~~~i~A~~~nGiL~I~~pK~~ 130 (161)
++.-..++.++-|.|+|-|..
T Consensus 60 ~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 60 VSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEEEEEETTEEEEEEEESS
T ss_pred cccCEEEEeCCEEEEEEEECC
Confidence 999888899999999999984
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.63 E-value=0.00039 Score=50.33 Aligned_cols=78 Identities=15% Similarity=0.243 Sum_probs=65.3
Q ss_pred ccceeeEEEcCCEEEEEEEcC-CCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCc
Q 041192 30 ALATADWMETPTAHVITLDIP-GMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSA 108 (161)
Q Consensus 30 ~~p~~di~e~~~~y~i~v~LP-G~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~v 108 (161)
..|.+.|..+.+...|+|.|| |++..+|.|.+.. +.|.|..+ . . .+ -...|...|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--g----------~----------~~-l~g~L~~~I 67 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--G----------R----------EI-LKGKLFDST 67 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--T----------E----------EE-EEEEBSSCB
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--C----------E----------EE-Eeecccccc
Confidence 458999999999999999998 8899999999999 89999742 1 0 11 346799999
Q ss_pred ccCCeeEEEeCCE-EEEEEeCcCc
Q 041192 109 DLEHVKAHQENGV-LRITVPKLAE 131 (161)
Q Consensus 109 d~~~i~A~~~nGi-L~I~~pK~~~ 131 (161)
+++.-..++.++- |.|+|-|...
T Consensus 68 ~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 68 IADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CGGGCEEEEECCCEEEEEEEBSSC
T ss_pred CccccEEEEcCCcEEEEEEEEcCC
Confidence 9999899998874 9999999875
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.50 E-value=0.00031 Score=50.51 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=65.3
Q ss_pred cceeeEEEcCCEEEEEEEcCCCCCCCeEEEEe-cCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcc
Q 041192 31 LATADWMETPTAHVITLDIPGMKKDDVKIEIE-ENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSAD 109 (161)
Q Consensus 31 ~p~~di~e~~~~y~i~v~LPG~~~~di~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd 109 (161)
.|.++|+++.+...|+|.||++ +++.|.++ . +.|.+++. .. .+ ..|.-.+.|-..|+
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~--------~~----------~~y~~~l~L~~~Id 61 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA--------QG----------ERFEFSLELYGKIM 61 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT--------TT----------EEEEEEEEBSSCEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC--------CC----------ceEEEEeEhhhccc
Confidence 4899999999999999999997 47899998 7 89999987 22 00 14667888999999
Q ss_pred cCCeeEEEeCCEEEEEEeCcCcc
Q 041192 110 LEHVKAHQENGVLRITVPKLAEE 132 (161)
Q Consensus 110 ~~~i~A~~~nGiL~I~~pK~~~~ 132 (161)
++ .+.+....-+.|+|.|..+.
T Consensus 62 pe-S~~~v~~~kIei~L~K~e~~ 83 (150)
T 2kmw_A 62 TE-YRKNVGLRNIIFSIQKEERS 83 (150)
T ss_dssp EE-EEEEEESSSEEEEEEECCSS
T ss_pred cc-ceEEecCCEEEEEEEECCCC
Confidence 99 88888888899999997754
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.41 E-value=7e-05 Score=52.89 Aligned_cols=86 Identities=13% Similarity=0.180 Sum_probs=60.3
Q ss_pred ccceeeEEEcCCE-------EEEEEEcCCCCCCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEE
Q 041192 30 ALATADWMETPTA-------HVITLDIPGMKKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQF 102 (161)
Q Consensus 30 ~~p~~di~e~~~~-------y~i~v~LPG~~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~ 102 (161)
..|.+.|.++.+. ..|+|.||++. ++.|.++. +.|.+++..... ..... ...|.-.+
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~----~g~~~---------~~~y~~~l 68 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPH----VGDEN---------VHHYQLHI 68 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC--------------------CEEBCEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccc----cCCcc---------CceEEEEE
Confidence 3588899998877 99999999974 88888988 889998664320 00000 01366778
Q ss_pred ECCCCcccCCeeEEEeCCE-EEEEEeCcCc
Q 041192 103 KMPMSADLEHVKAHQENGV-LRITVPKLAE 131 (161)
Q Consensus 103 ~LP~~vd~~~i~A~~~nGi-L~I~~pK~~~ 131 (161)
.|...|+++..+.++.++. |.|+|.|..+
T Consensus 69 ~L~~~Idpe~S~~~v~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 69 DLYKEIIPEKTMHKVANGQHYFLKLYKKDL 98 (134)
T ss_dssp ECSSCCCSSSEEEEECCC--CEEEEEECSS
T ss_pred EChhhccccccEEEECCCEEEEEEEEECCC
Confidence 9999999999999998888 9999999873
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=80.15 E-value=4.1 Score=25.55 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=28.8
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKLA 130 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~ 130 (161)
.|.-.+.|| .++.+.|+..+.+|.|+|.--+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 588899999 799999999999999999987654
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=78.96 E-value=7.3 Score=24.88 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=29.5
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcCc
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKLAE 131 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~~ 131 (161)
.|.-.+.|| .++.++|+..+.+|.|+|.--+...
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCG
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCc
Confidence 577889999 7899999999999999999876554
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=76.09 E-value=4.7 Score=25.49 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=28.9
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKLA 130 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~ 130 (161)
.|.-.+.|| .++.+.|+..+.+|.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 578899999 899999999999999999986543
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=73.57 E-value=6.5 Score=25.73 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=28.4
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCc
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKL 129 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~ 129 (161)
.|.-.+.|| .++.+.|+..+.+|.|+|.--+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 588899999 78999999999999999998643
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=73.40 E-value=5.7 Score=25.74 Aligned_cols=33 Identities=6% Similarity=0.025 Sum_probs=28.9
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKLA 130 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~ 130 (161)
.|.-.+.|| .++.+.|+..+.+|.|+|.--+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477889999 899999999999999999987653
No 33
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=73.38 E-value=21 Score=24.98 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=29.2
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcCc
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKLAE 131 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~~ 131 (161)
.|.-.+.|| .++.++|+..+.+|.|+|.--+...
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 577788998 6899999999999999999877663
No 34
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=70.21 E-value=7.6 Score=25.07 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=27.7
Q ss_pred EEEEEEEcC-CCCCCCeEEEEecCeEEEEEEEEec
Q 041192 42 AHVITLDIP-GMKKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 42 ~y~i~v~LP-G~~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
.|.-.+.|| +++.+.++-.+.+ +.|+|+..+..
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~-GvL~I~lpK~~ 95 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAG-GVLTVRFEKLR 95 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEET-TEEEEEEEBSS
T ss_pred EEEEEEECCCCcchhHcEEEEEC-CEEEEEEEccC
Confidence 355578899 6899999999999 99999987765
No 35
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=69.22 E-value=9.8 Score=24.89 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=16.9
Q ss_pred CCCeEEEEecCeEEEEEEEEec
Q 041192 54 KDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~ 75 (161)
|+.|+|++++ +.++|+|.+..
T Consensus 20 P~gV~V~i~~-~~VtVKGPkG~ 40 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPRGT 40 (100)
T ss_dssp CSSCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCce
Confidence 4678899999 89999987544
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=65.58 E-value=15 Score=24.46 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=29.8
Q ss_pred eEEEEEEECCCCcccCCeeEEEeC-CEEEEEEeCcCc
Q 041192 96 GKFWRQFKMPMSADLEHVKAHQEN-GVLRITVPKLAE 131 (161)
Q Consensus 96 g~f~r~~~LP~~vd~~~i~A~~~n-GiL~I~~pK~~~ 131 (161)
..|.-.+.|| .++.++|+..+.+ |.|+|..-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 3577889999 7899999999999 999999887653
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=63.93 E-value=33 Score=23.72 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=27.5
Q ss_pred EEEEEEECCCCcccCCeeEEEe-CCEEEEEEeCcCc
Q 041192 97 KFWRQFKMPMSADLEHVKAHQE-NGVLRITVPKLAE 131 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~-nGiL~I~~pK~~~ 131 (161)
.|.-.+.|| .++.+.|+..+. ++.|+|..-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 466778898 789999999995 6799999876654
No 38
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=63.00 E-value=16 Score=26.45 Aligned_cols=46 Identities=17% Similarity=0.301 Sum_probs=32.0
Q ss_pred CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeEEEeCCEEEEEEeCc
Q 041192 54 KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKAHQENGVLRITVPKL 129 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~ 129 (161)
|+.|+|++++ +.++|+|.+.. ..+. |+.. +....+|+.|.|..+..
T Consensus 11 P~gV~V~i~~-~~VtVkGpkG~----------------------L~~~--~~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPKGE----------------------LTRT--FHPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEE--CCTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEE--cCCC-----EEEEEeCCEEEEEcCCC
Confidence 4678999998 89999987544 4444 4544 44557899888875543
No 39
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=62.85 E-value=19 Score=26.92 Aligned_cols=21 Identities=19% Similarity=0.469 Sum_probs=17.3
Q ss_pred CCCeEEEEecCeEEEEEEEEec
Q 041192 54 KDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~ 75 (161)
++.|+|++++ +.++|+|.+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG~ 59 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKGE 59 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCEE
Confidence 4688999999 89999987654
No 40
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=60.55 E-value=12 Score=27.19 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=30.3
Q ss_pred CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeEEEeCCEEEEEEe
Q 041192 54 KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKAHQENGVLRITVP 127 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~p 127 (161)
|+.|+|++++ +.++|+|.+.. ..+. |+.. +....+++.|.|...
T Consensus 12 P~gV~v~i~~-~~v~VkGpkG~----------------------L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPKGE----------------------LEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSSCE----------------------EEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCCcE----------------------EEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 5789999998 89999977544 3343 4443 344567888888743
No 41
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=53.83 E-value=20 Score=21.88 Aligned_cols=19 Identities=26% Similarity=0.219 Sum_probs=14.0
Q ss_pred CCeeEEEeCCEEEEEEeCc
Q 041192 111 EHVKAHQENGVLRITVPKL 129 (161)
Q Consensus 111 ~~i~A~~~nGiL~I~~pK~ 129 (161)
..|.|.|+||+|.-.=|-.
T Consensus 3 k~IeAiYEnGVfkPLe~l~ 21 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKVD 21 (69)
T ss_dssp CCEEEEEETTEEEESSCCC
T ss_pred ceEEEEEECCEEeECCcCC
Confidence 4589999999997544433
No 42
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=53.68 E-value=17 Score=26.06 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=28.6
Q ss_pred EEEEEEECCCCcccCCeeEEEeCCEEEEEEeCcC
Q 041192 97 KFWRQFKMPMSADLEHVKAHQENGVLRITVPKLA 130 (161)
Q Consensus 97 ~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~ 130 (161)
.|.-.+.|| .++.+.|+..+.+|.|+|.--+..
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 577889998 899999999999999999986543
No 43
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=51.24 E-value=44 Score=24.38 Aligned_cols=21 Identities=24% Similarity=0.608 Sum_probs=17.3
Q ss_pred CCCeEEEEecCeEEEEEEEEec
Q 041192 54 KDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~ 75 (161)
|+.++|++++ +.++|+|.+..
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG~ 33 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPRGT 33 (191)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCcEEEEeC-CEEEEEcCCeE
Confidence 5789999999 99999987554
No 44
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=48.69 E-value=22 Score=25.88 Aligned_cols=21 Identities=19% Similarity=0.442 Sum_probs=16.5
Q ss_pred CCCeEEEEecCeEEEEEEEEec
Q 041192 54 KDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~ 75 (161)
|+.++|++++ +.++|+|.+..
T Consensus 14 P~gV~v~i~~-~~V~VkGpkG~ 34 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPKGE 34 (184)
T ss_dssp CSSCEEEESS-SEEEEECSSCE
T ss_pred CCCcEEEEeC-CEEEEEcCCeE
Confidence 3688999988 89999976544
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=47.61 E-value=17 Score=26.31 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=31.4
Q ss_pred CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeEEEeCCEEEEEEeCc
Q 041192 54 KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKAHQENGVLRITVPKL 129 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~ 129 (161)
|+.++|++++ +.++|+|.+.. ..+.|. +.. ++...++|.|.|..+..
T Consensus 9 P~gV~v~i~~-~~vtVkGpkG~----------------------L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDNGS----------------------VTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEET-TEEEEEETTEE----------------------EEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4678999999 89999987544 444431 333 44556889888875543
No 46
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=46.08 E-value=50 Score=24.08 Aligned_cols=21 Identities=29% Similarity=0.559 Sum_probs=17.2
Q ss_pred CCCeEEEEecCeEEEEEEEEec
Q 041192 54 KDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~ 75 (161)
|+.++|++++ +.++|+|.+..
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG~ 33 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPRGK 33 (190)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCce
Confidence 4788999998 89999987554
No 47
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=45.70 E-value=32 Score=25.15 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=18.8
Q ss_pred EcCCCCCCCeEEEEecCeEEEEEEEEec
Q 041192 48 DIPGMKKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 48 ~LPG~~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
..|=-=|+.++|++++ +.++|+|.+..
T Consensus 7 k~pI~IP~gV~V~i~~-~~VtVkGpkG~ 33 (192)
T 2zkr_e 7 NQTVDIPENVDITLKG-RTVIVKGPRGT 33 (192)
T ss_dssp ---CCCCTTCEEEEET-TEEEEEETTEE
T ss_pred cCcEEcCCCCEEEEeC-CEEEEECCCeE
Confidence 3343346789999999 89999987544
No 48
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=43.51 E-value=30 Score=25.26 Aligned_cols=22 Identities=27% Similarity=0.427 Sum_probs=18.1
Q ss_pred CCCCeEEEEecCeEEEEEEEEec
Q 041192 53 KKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 53 ~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
=|+.++|++++ +.++|+|.+..
T Consensus 12 IP~gV~v~i~~-~~V~VkGPkG~ 33 (188)
T 4a17_E 12 IPDKVTITAKQ-RVVEVKGPLGT 33 (188)
T ss_dssp CCTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCcEEEEeC-CEEEEEcCCeE
Confidence 36789999999 99999987554
No 49
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=43.34 E-value=10 Score=28.54 Aligned_cols=47 Identities=26% Similarity=0.393 Sum_probs=31.1
Q ss_pred CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeEEEeCCEEEEEEeCc
Q 041192 54 KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKAHQENGVLRITVPKL 129 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~ 129 (161)
|+.|+|++++ +.++|+|.+.. ..+ .|+..++.. ..+||.|.|..+..
T Consensus 54 P~gV~V~i~~-~~VtVKGPkG~----------------------L~~--~~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEG-QDLKVKGPLGE----------------------LAL--TYPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESS-SEEEECCSSCC----------------------EEE--ECCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeC-CEEEEECCCeE----------------------EEE--EcCCCEEEE----EecCCEEEEEcCCC
Confidence 4678899988 89999987554 333 445554331 45788887775543
No 50
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=41.91 E-value=30 Score=22.42 Aligned_cols=35 Identities=3% Similarity=0.111 Sum_probs=29.0
Q ss_pred CCEEEEEEEcCC-CCCCCeEEEEecCeEEEEEEEEec
Q 041192 40 PTAHVITLDIPG-MKKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 40 ~~~y~i~v~LPG-~~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
+..|.+.++|++ +.+++-...+.+ +.|.|.-.+..
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~-~~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLS-TKIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECS-SSEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEEC-CEEEEEEEcCC
Confidence 568999999997 689999999998 78888866543
No 51
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=38.27 E-value=1.2e+02 Score=22.65 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=40.3
Q ss_pred EcCCCCCCCeEEEEe-cCeEEEEEEEEecCCccccccccccEEEEeeeeeEEEEEEECCCCcccCCeeEEEeCCEEEEE
Q 041192 48 DIPGMKKDDVKIEIE-ENKVLRVSGERKSDDYYKEGVQREKWHRAERISGKFWRQFKMPMSADLEHVKAHQENGVLRIT 125 (161)
Q Consensus 48 ~LPG~~~~di~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~ 125 (161)
.|||+..+==-+.+. +++.|.+.... ...++.--.. |.+.+++.|...-|.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~-----------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK-----------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET-----------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC-----------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 489998752236665 22667665322 2233333333 789999999877788887643 66766554
No 52
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=35.96 E-value=22 Score=23.45 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=14.5
Q ss_pred CeeEEEeCCEEEEEEeC
Q 041192 112 HVKAHQENGVLRITVPK 128 (161)
Q Consensus 112 ~i~A~~~nGiL~I~~pK 128 (161)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 37788999999999973
No 53
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=35.74 E-value=84 Score=20.96 Aligned_cols=31 Identities=16% Similarity=0.123 Sum_probs=24.1
Q ss_pred eEEEEEEECCCCcccCCeeEEEeCCEEEEEE
Q 041192 96 GKFWRQFKMPMSADLEHVKAHQENGVLRITV 126 (161)
Q Consensus 96 g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~ 126 (161)
....-+|.||.+++.+++...+...-|.|.+
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 3466789999999999999999999999987
No 54
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=31.98 E-value=85 Score=20.70 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=28.8
Q ss_pred EEEcCCEEEEEEEc-CCCCCCCeEEEEecCeEEEEEEEEec
Q 041192 36 WMETPTAHVITLDI-PGMKKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 36 i~e~~~~y~i~v~L-PG~~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
+...++.+.|.+.+ ||.+++.|. .+.+ +.|.|.-....
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~-~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHG-DEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECS-SCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccC-CEEEEEEecCC
Confidence 56678888898888 899998873 4666 78888866554
No 55
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=31.31 E-value=25 Score=25.34 Aligned_cols=21 Identities=19% Similarity=0.468 Sum_probs=16.4
Q ss_pred CCCeEEEEecCeEEEEEEEEec
Q 041192 54 KDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~ 75 (161)
|+.++|++++ +.++|+|.+..
T Consensus 11 P~gV~v~i~~-~~V~VkGpkG~ 31 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKNGE 31 (176)
T ss_dssp CTTCCCEESS-SEEECCBTTBC
T ss_pred CCCcEEEEeC-CEEEEEcCCEE
Confidence 4678888888 88999876554
No 56
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=31.03 E-value=38 Score=19.28 Aligned_cols=22 Identities=14% Similarity=0.367 Sum_probs=18.7
Q ss_pred CCCCeEEEEecCeEEEEEEEEec
Q 041192 53 KKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 53 ~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
.-+||.|..++ +.++|.|+...
T Consensus 31 gyndinvtwdg-dtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDG-DTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECS-SCEEEEEECCC
T ss_pred CcccceeEEcC-CEEEEEeEEcC
Confidence 45799999999 89999998765
No 57
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=30.66 E-value=40 Score=22.87 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=14.1
Q ss_pred eeEEEeCCEEEEEEeC
Q 041192 113 VKAHQENGVLRITVPK 128 (161)
Q Consensus 113 i~A~~~nGiL~I~~pK 128 (161)
+.+.+.+|||+|.++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6788999999999974
No 58
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=28.58 E-value=1.1e+02 Score=20.51 Aligned_cols=31 Identities=13% Similarity=0.324 Sum_probs=20.4
Q ss_pred CeeEEE---eCCEEEEEEeCcCccccCCCeEEEecCC
Q 041192 112 HVKAHQ---ENGVLRITVPKLAEEKKRQPNVINIDEE 145 (161)
Q Consensus 112 ~i~A~~---~nGiL~I~~pK~~~~~~~~~~~I~I~~~ 145 (161)
.|+.+| .||+|.|+.--.... +...|.|+..
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg---~~~~i~i~~~ 132 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSG---KEQKITIKAS 132 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC---CEEEEEEECS
T ss_pred EEEEEEEECCCCEEEEEEEECCCC---CEEEEEEecC
Confidence 566665 589999998543333 3567777644
No 59
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=26.33 E-value=65 Score=23.81 Aligned_cols=48 Identities=10% Similarity=0.270 Sum_probs=26.7
Q ss_pred CCCeEEEEecCeEEEEEEEEecCCccccccccccEEEEe---eeeeEEEEEEECCCC
Q 041192 54 KDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWHRAE---RISGKFWRQFKMPMS 107 (161)
Q Consensus 54 ~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~~~e---~~~g~f~r~~~LP~~ 107 (161)
++++ .+.+++.|+|++.+.. ...-.+..+.... ..+|.|+-++.||..
T Consensus 49 ~~n~--~v~~~G~L~I~~~~~~----~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 49 RANS--ALDGNGNLVITARQEA----DGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp TTTE--EECSSSCEEEEEEECT----TSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred ccce--EEecCCEEEEEEEecC----CCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 3444 3444367899887654 1111122232222 357889999999963
No 60
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=25.38 E-value=1.5e+02 Score=19.46 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=27.7
Q ss_pred eeEEEEEEECCCCc-ccCCeeEEEeCCEEEEEEe
Q 041192 95 SGKFWRQFKMPMSA-DLEHVKAHQENGVLRITVP 127 (161)
Q Consensus 95 ~g~f~r~~~LP~~v-d~~~i~A~~~nGiL~I~~p 127 (161)
.....-+|.||..+ +.+++...+...-|.|.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 34567789999888 8999999999999999873
No 61
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=24.53 E-value=53 Score=20.00 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=18.5
Q ss_pred CCCCCCeEEEEecCeEEEEEEEEe
Q 041192 51 GMKKDDVKIEIEENKVLRVSGERK 74 (161)
Q Consensus 51 G~~~~di~V~v~~~~~L~I~g~~~ 74 (161)
-|+.+.|.+...- +.|.|+|+.=
T Consensus 17 sFd~e~i~L~T~~-G~L~IkG~~L 39 (71)
T 2ks0_A 17 SFDPKEILLETIQ-GVLSIKGEKL 39 (71)
T ss_dssp EECSSEEEEEETT-EEEEEEEECC
T ss_pred EECCCEEEEEeCc-eEEEEEcCCc
Confidence 3578888888888 8999999853
No 62
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=24.48 E-value=1.4e+02 Score=23.35 Aligned_cols=51 Identities=16% Similarity=0.243 Sum_probs=29.7
Q ss_pred CCCCeEEEEecCeEEEEEEEEecCCccccccc-cccEE-------EE--eeeeeEEEEEEECCCC
Q 041192 53 KKDDVKIEIEENKVLRVSGERKSDDYYKEGVQ-REKWH-------RA--ERISGKFWRQFKMPMS 107 (161)
Q Consensus 53 ~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~-~~~~~-------~~--e~~~g~f~r~~~LP~~ 107 (161)
+++++.| ++ +.|+|++.+..... ..... ...|. .. ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v--~d-G~L~I~a~~~~~~~-~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KK-GCLRIINTVLSPTE-GLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ET-TEEEEECEEEEEEE-CGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--EC-CEEEEEEEeCCCCc-ccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 4566555 57 89999998764100 00010 01222 21 2578899999999975
No 63
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=24.44 E-value=1.8e+02 Score=20.11 Aligned_cols=33 Identities=6% Similarity=0.198 Sum_probs=27.6
Q ss_pred eeEEEEEEECCCCcccCCeeEEEeCCEEEEEEe
Q 041192 95 SGKFWRQFKMPMSADLEHVKAHQENGVLRITVP 127 (161)
Q Consensus 95 ~g~f~r~~~LP~~vd~~~i~A~~~nGiL~I~~p 127 (161)
.....-+|.||..+....+...+...-|.|.+.
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 345677899999999999999999999998763
No 64
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=24.41 E-value=46 Score=22.49 Aligned_cols=26 Identities=8% Similarity=0.116 Sum_probs=22.4
Q ss_pred cCCCCCCCeEEEEecCeEEEEEEEEec
Q 041192 49 IPGMKKDDVKIEIEENKVLRVSGERKS 75 (161)
Q Consensus 49 LPG~~~~di~V~v~~~~~L~I~g~~~~ 75 (161)
-|.+++-.|.|.+++ +.++++|.-..
T Consensus 2 ~~~~~p~~i~V~v~~-G~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSG-NTVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECS-SEEEEEEEESC
T ss_pred CCcccceeEEEEEEC-CEEEEEEECCC
Confidence 467778889999999 89999999876
No 65
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=24.01 E-value=1.6e+02 Score=19.30 Aligned_cols=35 Identities=11% Similarity=0.069 Sum_probs=20.0
Q ss_pred EEEEECCCCcccCCeeEEEeCCEEEEEEeCcCccccCCCeEEEec
Q 041192 99 WRQFKMPMSADLEHVKAHQENGVLRITVPKLAEEKKRQPNVINID 143 (161)
Q Consensus 99 ~r~~~LP~~vd~~~i~A~~~nGiL~I~~pK~~~~~~~~~~~I~I~ 143 (161)
.|++..| --++|.++|.+|.|.+.+.-. ...|.|.
T Consensus 22 ~RSI~~~-----iPi~A~id~~~L~I~F~~~~~-----~vtItI~ 56 (108)
T 3d33_A 22 IRSAATN-----CPITVFTDGYLLTLKNASPDR-----DMTIRIT 56 (108)
T ss_dssp ------C-----CSEEEEEETTEEEEEESSCCS-----EEEEEEE
T ss_pred ccccCCC-----CCcEEEEECCEEEEEECCcCC-----CEEEEEE
Confidence 5676532 235688889999999966554 3566666
No 66
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=23.20 E-value=54 Score=22.35 Aligned_cols=17 Identities=24% Similarity=0.354 Sum_probs=14.5
Q ss_pred CCeeEEEeCCEEEEEEe
Q 041192 111 EHVKAHQENGVLRITVP 127 (161)
Q Consensus 111 ~~i~A~~~nGiL~I~~p 127 (161)
..+.+.+.+|||+|.++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45778899999999996
No 67
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=22.22 E-value=39 Score=20.97 Aligned_cols=15 Identities=20% Similarity=0.470 Sum_probs=12.7
Q ss_pred cCCeeEEEeCCEEEE
Q 041192 110 LEHVKAHQENGVLRI 124 (161)
Q Consensus 110 ~~~i~A~~~nGiL~I 124 (161)
.++-++.|++|||+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 456889999999987
No 68
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=22.13 E-value=2e+02 Score=19.74 Aligned_cols=48 Identities=21% Similarity=0.353 Sum_probs=27.5
Q ss_pred eeEEEEEEECCCC-cccCCeeEEE---eCCEEEEEEeCcCccccCCCeEEEecCCC
Q 041192 95 SGKFWRQFKMPMS-ADLEHVKAHQ---ENGVLRITVPKLAEEKKRQPNVINIDEES 146 (161)
Q Consensus 95 ~g~f~r~~~LP~~-vd~~~i~A~~---~nGiL~I~~pK~~~~~~~~~~~I~I~~~~ 146 (161)
.|.|.-.= +|.. -....|..+| .||+|.|..--.... +...|.|....
T Consensus 65 LG~f~l~g-ipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg---~~~~i~I~~~~ 116 (152)
T 3dob_A 65 LGTFELSG-IPPAPRGVPQIEVTFNIDANGILNVSAEDKSTG---KSNRITIQNEK 116 (152)
T ss_dssp EEEEEEEC-CCCCCTTCCCEEEEEEECTTCCEEEEEEETTTC---CEEEEEECCC-
T ss_pred eEEEEEeC-CCCCCCCCceEEEEEEeCCCCeEEEEEEEcCCC---CEEEEEEEcCC
Confidence 46665431 3432 1223466665 499999998644433 45678887553
No 69
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=21.06 E-value=1.9e+02 Score=21.94 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=26.7
Q ss_pred CCCCeEEEEecCeEEEEEEEEecCCccccccccccEE-EEeeeeeEEEEEEECCCC
Q 041192 53 KKDDVKIEIEENKVLRVSGERKSDDYYKEGVQREKWH-RAERISGKFWRQFKMPMS 107 (161)
Q Consensus 53 ~~~di~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~~~-~~e~~~g~f~r~~~LP~~ 107 (161)
.++++.| ++ +.|+|++.+.. +..+. .....+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~-G~L~L~~~k~t---------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQ-GSLTIWLDSTS---------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ET-TEEEEEECSSC---------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--EC-CEEEEEEecCC---------CCEEEECceEeeEEEEEEEEeCCC
Confidence 4556655 56 66888865432 11111 234578999999999964
Done!