BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041195
         (195 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|208436644|gb|ACI28868.1| mitochondrial alternative oxidase 1b, partial [Vitis vinifera]
          Length = 205

 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 171/195 (87%), Positives = 182/195 (93%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD+SI+V KHHKP  + DKFAYWTVQALK PTH+FFQR+HMCHAMLLETV AVP
Sbjct: 7   PWETYKADISIDVEKHHKPVKFMDKFAYWTVQALKIPTHMFFQRKHMCHAMLLETVAAVP 66

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+SLR+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERALVFAVQGV
Sbjct: 67  GMVGGMLLHCQSLRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERALVFAVQGV 126

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWRLP 
Sbjct: 127 FFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPA 186

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV VIRADE
Sbjct: 187 ESTLRDVVEVIRADE 201


>gi|208436662|gb|ACI28877.1| mitochondrial alternative oxidase 1b [Vitis vinifera]
          Length = 201

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 170/194 (87%), Positives = 181/194 (93%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD+SI+V KHHKP  + DKFAYWTVQALK PTH+FFQR+HMCHAMLLETV AVP
Sbjct: 8   PWETYKADISIDVEKHHKPVKFMDKFAYWTVQALKVPTHMFFQRKHMCHAMLLETVAAVP 67

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+SLR+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERALVFAVQGV
Sbjct: 68  GMVGGMLLHCQSLRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERALVFAVQGV 127

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWRLP 
Sbjct: 128 FFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPA 187

Query: 181 DSTLRDVVVVIRAD 194
           +STLRDVV VIRAD
Sbjct: 188 ESTLRDVVEVIRAD 201


>gi|224074535|ref|XP_002304386.1| predicted protein [Populus trichocarpa]
 gi|222841818|gb|EEE79365.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 169/195 (86%), Positives = 183/195 (93%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+YK D+SI+V KHHKP    DKFAYWTVQ LK+PT+LFFQRRHMCHAMLLETV AVP
Sbjct: 29  PWESYKPDISIDVKKHHKPGTTMDKFAYWTVQVLKYPTYLFFQRRHMCHAMLLETVAAVP 88

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+PQWYERALVFAVQG 
Sbjct: 89  GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFVEIAKPQWYERALVFAVQGA 148

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAYLASPKLAHRIVGYLEEEAVNSY+EFL+DL+NG+FEN PAPAIAIDYWRLPP
Sbjct: 149 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYSEFLEDLDNGNFENVPAPAIAIDYWRLPP 208

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV VIRADE
Sbjct: 209 NSTLRDVVFVIRADE 223


>gi|147782375|emb|CAN70584.1| hypothetical protein VITISV_001908 [Vitis vinifera]
          Length = 285

 Score =  362 bits (930), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 169/195 (86%), Positives = 181/195 (92%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD+SI+V KHHKP  + DKFAYWTVQALK PTH+FFQR+HMCHAMLLETV AVP
Sbjct: 61  PWETYKADISIDVEKHHKPVKFMDKFAYWTVQALKIPTHMFFQRKHMCHAMLLETVAAVP 120

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+S R+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERAJVFAVQGV
Sbjct: 121 GMVGGMLLHCQSXRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERAJVFAVQGV 180

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWRLP 
Sbjct: 181 FFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPA 240

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV VIRADE
Sbjct: 241 ESTLRDVVEVIRADE 255


>gi|208436648|gb|ACI28870.1| mitochondrial alternative oxidase 1b, partial [Vitis vinifera]
          Length = 199

 Score =  362 bits (929), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 169/195 (86%), Positives = 181/195 (92%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD+SI+V KHHKP  + DKFAYWTVQALK PTH+FFQR+HMCHAMLLETV AVP
Sbjct: 1   PWETYKADISIDVEKHHKPVKFMDKFAYWTVQALKIPTHMFFQRKHMCHAMLLETVAAVP 60

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+S R+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERA+VFAVQGV
Sbjct: 61  GMVGGMLLHCQSPRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERAIVFAVQGV 120

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWRLP 
Sbjct: 121 FFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPA 180

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV VIRADE
Sbjct: 181 ESTLRDVVEVIRADE 195


>gi|225427480|ref|XP_002262982.1| PREDICTED: alternative oxidase 3, mitochondrial [Vitis vinifera]
 gi|296088482|emb|CBI37473.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  362 bits (928), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 169/195 (86%), Positives = 181/195 (92%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD+SI+V KHHKP  + DKFAYWTVQALK PTH+FFQR+HMCHAMLLETV AVP
Sbjct: 98  PWETYKADISIDVEKHHKPVKFMDKFAYWTVQALKIPTHMFFQRKHMCHAMLLETVAAVP 157

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+S R+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERA+VFAVQGV
Sbjct: 158 GMVGGMLLHCQSPRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERAIVFAVQGV 217

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWRLP 
Sbjct: 218 FFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPA 277

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV VIRADE
Sbjct: 278 ESTLRDVVEVIRADE 292


>gi|350539127|ref|NP_001234120.1| alternative oxidase 1b [Solanum lycopersicum]
 gi|29465624|gb|AAK58483.1| alternative oxidase 1b [Solanum lycopersicum]
          Length = 318

 Score =  360 bits (925), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 168/195 (86%), Positives = 182/195 (93%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD+SI+V KHH P N+ DKFAYWTVQ+LK+PT+LFFQRRHMCHAMLLETV AVP
Sbjct: 94  PWETYSADISIDVEKHHMPTNFMDKFAYWTVQSLKYPTYLFFQRRHMCHAMLLETVAAVP 153

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTFIEL+ P+WYERALVFAVQGV
Sbjct: 154 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSNPKWYERALVFAVQGV 213

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYF+AYLASPKLAHRIVGYLEEEAVNSYTEFL D+E G FEN+PAPAIAIDYWRLP 
Sbjct: 214 FVNAYFIAYLASPKLAHRIVGYLEEEAVNSYTEFLIDIEKGLFENSPAPAIAIDYWRLPA 273

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 274 DATLKDVVTVIRADE 288


>gi|6967043|emb|CAB72441.1| alternative oxidase [Populus tremula x Populus tremuloides]
          Length = 294

 Score =  358 bits (920), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 169/195 (86%), Positives = 182/195 (93%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+YK D+SI+V KHHKP    DKFAYWTVQ LK+PT+LFFQRRHMCHAMLLETV AVP
Sbjct: 70  PWESYKPDISIDVKKHHKPGTTMDKFAYWTVQVLKYPTYLFFQRRHMCHAMLLETVAAVP 129

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+PQWYERALVFAVQGV
Sbjct: 130 GMVGGMLLHFKSLRRFEQSGGWIKALLEEAENERMHLMTFVEIAKPQWYERALVFAVQGV 189

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAYLASPKLAHRIVGYLEEEAVNSY+EFL+DL+N SFEN PAPAIAIDYWRLPP
Sbjct: 190 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYSEFLEDLDNCSFENVPAPAIAIDYWRLPP 249

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV VIRADE
Sbjct: 250 NSTLRDVVFVIRADE 264


>gi|18398395|ref|NP_564395.1| alternative oxidase 3 [Arabidopsis thaliana]
 gi|85681032|sp|Q8LEE7.2|AOX3_ARATH RecName: Full=Ubiquinol oxidase 3, mitochondrial; AltName:
           Full=Alternative oxidase 3; Flags: Precursor
 gi|8920609|gb|AAF81331.1|AC007767_11 Strong similarity to alternative oxidase from Populus tremula x
           Populus tremuloides gb|AJ271889. It contains an
           alternative oxidase domain PF|01786 [Arabidopsis
           thaliana]
 gi|115311485|gb|ABI93923.1| At1g32350 [Arabidopsis thaliana]
 gi|332193346|gb|AEE31467.1| alternative oxidase 3 [Arabidopsis thaliana]
          Length = 318

 Score =  354 bits (909), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 163/195 (83%), Positives = 179/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++YK D+SI+VTKHHKP N+ DKFAYWTVQ LK P  LFFQR+HMCHAMLLETV AVP
Sbjct: 94  PWDSYKPDVSIDVTKHHKPSNFTDKFAYWTVQTLKIPVQLFFQRKHMCHAMLLETVAAVP 153

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIKALLEEAENERMHLMTFIEL++P+WYERA+VF VQGV
Sbjct: 154 GMVGGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSQPKWYERAIVFTVQGV 213

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAY+ SPKLAHRI GYLEEEAVNSYTEFLKD++ G FEN+PAPAIAIDYWRLP 
Sbjct: 214 FFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKDIDAGKFENSPAPAIAIDYWRLPK 273

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV VIRADE
Sbjct: 274 DATLRDVVYVIRADE 288


>gi|297851678|ref|XP_002893720.1| At1g32350/F5D14.4 [Arabidopsis lyrata subsp. lyrata]
 gi|297339562|gb|EFH69979.1| At1g32350/F5D14.4 [Arabidopsis lyrata subsp. lyrata]
          Length = 315

 Score =  353 bits (906), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++YK D+SI+VTKHHKP N+ DKFAYWTVQ LK P  LFFQR+HMCHAMLLETV AVP
Sbjct: 91  PWDSYKPDVSIDVTKHHKPSNFTDKFAYWTVQTLKIPVQLFFQRKHMCHAMLLETVAAVP 150

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIKALLEEAENERMHLMTFIEL++P+WYERA+VF VQG 
Sbjct: 151 GMVGGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSQPKWYERAIVFTVQGA 210

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAY+ SPKLAHRI GYLEEEAVNSYTEFLKD++ G FEN+PAPAIAIDYWRLP 
Sbjct: 211 FFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKDIDAGKFENSPAPAIAIDYWRLPK 270

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV VIRADE
Sbjct: 271 DATLRDVVYVIRADE 285


>gi|21553592|gb|AAM62685.1| oxidase, putative [Arabidopsis thaliana]
          Length = 318

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++YK D+SI+VTKHHKP N+ DKFAYWTVQ LK P  LFFQR+HMCHAMLLETV AVP
Sbjct: 94  PWDSYKPDVSIDVTKHHKPSNFTDKFAYWTVQTLKIPVQLFFQRKHMCHAMLLETVAAVP 153

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVG MLLH KSLR+FEHSGGWIKALLEEAENERMHLMTFIEL++P+WYERA+VF VQGV
Sbjct: 154 GMVGWMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSQPKWYERAIVFTVQGV 213

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAY+ SPKLAHRI GYLEEEAVNSYTEFLKD++ G FEN+PAPAIAIDYWRLP 
Sbjct: 214 FFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKDIDAGKFENSPAPAIAIDYWRLPK 273

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV VIRADE
Sbjct: 274 DATLRDVVYVIRADE 288


>gi|433335541|gb|AGB34164.1| mitochondrial alternative oxidase 1c [Olea europaea subsp.
           europaea]
          Length = 353

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 162/195 (83%), Positives = 179/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD SI+VTKHHK   + DKFAYWTVQ+LKFPT+LFFQRRHMCHAMLLETV AVP
Sbjct: 107 PWETYKADTSIDVTKHHKATTFMDKFAYWTVQSLKFPTYLFFQRRHMCHAMLLETVAAVP 166

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KS+R+FEHSGGWIKALLEEAENERMHLMTF+EL++P+WY+RALVFAVQGV
Sbjct: 167 GMVGGMLLHLKSIRRFEHSGGWIKALLEEAENERMHLMTFLELSQPKWYQRALVFAVQGV 226

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYF++Y+ SPKLAHRIVGYLEEEAVNSYTEFL DLE G  EN PAPAIAIDYW+LP 
Sbjct: 227 FANAYFVSYVVSPKLAHRIVGYLEEEAVNSYTEFLIDLEKGLVENRPAPAIAIDYWQLPS 286

Query: 181 DSTLRDVVVVIRADE 195
           +STL+DVV VIRADE
Sbjct: 287 ESTLKDVVTVIRADE 301


>gi|18176467|gb|AAL60049.1| At1g32350/F5D14.4 [Arabidopsis thaliana]
          Length = 317

 Score =  345 bits (885), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 160/195 (82%), Positives = 178/195 (91%), Gaps = 1/195 (0%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++YK D+SI+VTKHHKP N+ DKFAYWTVQ LK P  LFFQR+HMCHAMLLETV AVP
Sbjct: 94  PWDSYKPDVSIDVTKHHKPSNFTDKFAYWTVQTLKIPVQLFFQRKHMCHAMLLETV-AVP 152

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIKALLEEAENERMHLMTFIEL++P+WYERA+VF VQGV
Sbjct: 153 GMVGGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSQPKWYERAIVFTVQGV 212

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAY+ SPKLAHRI GYLEEEAVNSYTEFLKD++ G FEN+PAPAIA+DYWR P 
Sbjct: 213 FFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKDIDAGKFENSPAPAIAMDYWRFPK 272

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV VIRA+E
Sbjct: 273 DATLRDVVYVIRAEE 287


>gi|155573899|gb|ABU24346.1| mitochondrial alternative oxidase AOX1a [Nicotiana glutinosa]
 gi|155573901|gb|ABU24347.1| mitochondrial alternative oxidase AOX1a [Nicotiana glutinosa]
          Length = 353

 Score =  345 bits (885), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 158/195 (81%), Positives = 179/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADLSI++TKHH P  + DKFAYWTV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKADLSIDLTKHHAPTTFLDKFAYWTVKALRYPTDIFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVFAVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 249 FFNAYFVTYLLSPKLAHRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPK 308

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 309 DSTLRDVVLVVRADE 323


>gi|40036979|gb|AAR37364.1| mitochondrial alternative oxidase [Nicotiana attenuata]
          Length = 349

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 157/195 (80%), Positives = 179/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I++TKHH P  + DKFAYWTV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 125 PWETYKADLTIDLTKHHAPTTFLDKFAYWTVKALRYPTDIFFQRRYGCRAMMLETVAAVP 184

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 185 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVFAVQGV 244

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 245 FFNAYFVTYLVSPKLAHRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPK 304

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 305 DSTLRDVVLVVRADE 319


>gi|117646985|dbj|BAF36564.1| alternative oxidase [Nicotiana tabacum]
          Length = 353

 Score =  341 bits (875), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 155/195 (79%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADLSI++TKHH P  + DKFAYWTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKADLSIDLTKHHAPTTFLDKFAYWTVKSLRYPTDIFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIK LL+EAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEQSGGWIKTLLDEAENERMHLMTFMEVAKPNWYERALVFAVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 249 FFNAYFVTYLLSPKLAHRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPK 308

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 309 DSTLRDVVLVVRADE 323


>gi|3913066|sp|Q40578.2|AOX2_TOBAC RecName: Full=Ubiquinol oxidase 2, mitochondrial; AltName:
           Full=Alternative oxidase 2; Flags: Precursor
          Length = 297

 Score =  340 bits (872), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 157/195 (80%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADLSI++TKHH P  + DKFAYWTV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 73  PWETYKADLSIDLTKHHAPTTFLDKFAYWTVKALRYPTDIFFQRRYGCRAMMLETVAAVP 132

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 133 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVFAVQGV 192

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYF+ YL SPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 193 FINAYFVTYLLSPKLAHRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPK 252

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 253 DSTLRDVVLVVRADE 267


>gi|350539075|ref|NP_001234117.1| alternative oxidase 1a [Solanum lycopersicum]
 gi|29465622|gb|AAK58482.1| alternative oxidase 1a [Solanum lycopersicum]
          Length = 358

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 157/195 (80%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+AD+SI++TKHH P  + DKFAYWTV+ L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 134 PWETYEADMSIDLTKHHAPVTFLDKFAYWTVKILRFPTDVFFQRRYGCRAMMLETVAAVP 193

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P  YERALVFAVQGV
Sbjct: 194 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNVYERALVFAVQGV 253

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF AYL SPKLAHRIVGYLEEEAV+SYTEFLK+L+NG+ EN PAPAIAIDYWRLP 
Sbjct: 254 FFNAYFAAYLISPKLAHRIVGYLEEEAVHSYTEFLKELDNGNIENVPAPAIAIDYWRLPK 313

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 314 DATLRDVVLVVRADE 328


>gi|225571959|gb|ABZ81227.2| mitochondrial alternative oxidase 1a [Daucus carota]
          Length = 326

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 153/195 (78%), Positives = 179/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADL+I++ KHH P  + DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 102 PWETYQADLTIDLKKHHVPTTFLDKLAYWTVKSLRFPTDVFFQRRYGCRAMMLETVAAVP 161

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+++P+WYERALVF VQGV
Sbjct: 162 GMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVSQPRWYERALVFTVQGV 221

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAYLASPKLAHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 222 FFNAYFLAYLASPKLAHRVVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDYWRLPA 281

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 282 DSTLRDVVMVVRADE 296


>gi|90959751|dbj|BAE92716.1| Alternative Oxidase [Solanum tuberosum]
          Length = 337

 Score =  338 bits (867), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 157/195 (80%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+AD+SI++TKHH P  + DKFAYWTV+ L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 132 PWETYEADMSIDLTKHHAPVTFLDKFAYWTVKVLRFPTDVFFQRRYGCRAMMLETVAAVP 191

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P  YERALVFAVQGV
Sbjct: 192 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNVYERALVFAVQGV 251

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF AYL SPKLAHRIVGYLEEEAV+SYTEFLK+L+NG+ EN PAPAIAIDYWRLP 
Sbjct: 252 FFNAYFAAYLISPKLAHRIVGYLEEEAVHSYTEFLKELDNGNIENVPAPAIAIDYWRLPK 311

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 312 DATLRDVVLVVRADE 326


>gi|46452193|gb|AAS98193.1| alternative oxidase 1au [Solanum lycopersicum]
          Length = 358

 Score =  338 bits (866), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 157/195 (80%), Positives = 177/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+AD+SI++TKHH P  + DKFAYWTV+ L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 134 PWETYEADMSIDLTKHHAPVTFLDKFAYWTVKILRFPTDVFFQRRYGCRAMMLETVAAVP 193

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P  YERALVFAVQGV
Sbjct: 194 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNVYERALVFAVQGV 253

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF AYL SPKLAHRIVGYLEEEAV SYTEFLK+L+NG+ EN PAPAIAIDYWRLP 
Sbjct: 254 FFNAYFAAYLISPKLAHRIVGYLEEEAVLSYTEFLKELDNGNIENVPAPAIAIDYWRLPK 313

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 314 DATLRDVVLVVRADE 328


>gi|82468807|gb|ABB76768.1| alternative oxidase 1a [Solanum tuberosum]
          Length = 355

 Score =  337 bits (865), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/195 (80%), Positives = 177/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+AD+SI++TKHH P  + DKFAYWTV+ L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 132 PWETYEADMSIDLTKHHAPVTFLDKFAYWTVKVLRFPTDVFFQRRYGCRAMMLETVAAVP 191

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P  YERALVF VQGV
Sbjct: 192 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNVYERALVFTVQGV 251

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF AYL SPKLAHRIVGYLEEEAV+SYTEFLK+L+NG+ EN PAPAIAIDYWRLP 
Sbjct: 252 FFNAYFAAYLISPKLAHRIVGYLEEEAVHSYTEFLKELDNGNIENVPAPAIAIDYWRLPK 311

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 312 DATLRDVVLVVRADE 326


>gi|226897263|dbj|BAH56640.1| alternative oxidase 1b [Nelumbo nucifera]
          Length = 348

 Score =  337 bits (864), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 152/195 (77%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH+P  + DK AYWTV+ L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 124 PWETYQADLSIDLKKHHEPNKFLDKMAYWTVKTLRYPTDLFFQRRYGCRAMMLETVAAVP 183

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV GMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYERALVF VQG+
Sbjct: 184 GMVAGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSQPKWYERALVFTVQGI 243

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAYL SPKLAHR VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYW LPP
Sbjct: 244 FFNAYFLAYLISPKLAHRAVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWHLPP 303

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+ +RADE
Sbjct: 304 DSTLRDVVLAVRADE 318


>gi|633600|emb|CAA56163.1| alternative oxidase [Nicotiana tabacum]
          Length = 297

 Score =  337 bits (864), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/195 (80%), Positives = 177/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADLSI++TKHH P  + DKFAYWTV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 73  PWETYKADLSIDLTKHHAPTTFLDKFAYWTVKALRYPTDIFFQRRYGCRAMMLETVAAVP 132

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 133 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVFAVQGV 192

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYF+ YL SPKLA RIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 193 FINAYFVTYLLSPKLAXRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPK 252

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 253 DSTLRDVVLVVRADE 267


>gi|40036985|gb|AAR37365.1| mitochondrial alternative oxidase [Nicotiana attenuata]
          Length = 353

 Score =  335 bits (860), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 158/195 (81%), Positives = 179/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I++TKHH P  + DKFAYWTV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKADLTIDLTKHHAPTTFLDKFAYWTVKALRYPTDIFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVFAVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 249 FFNAYFVTYLVSPKLAHRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPK 308

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVVVV+RADE
Sbjct: 309 DSTLRDVVVVVRADE 323


>gi|111607217|dbj|BAF02775.1| alternative oxidase [Lactuca sativa]
          Length = 228

 Score =  335 bits (859), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 154/195 (78%), Positives = 178/195 (91%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P  + DK AYWTV++L+FPT +FFQ+R+ C AM+LETV AVP
Sbjct: 4   PWETYQADLSIDLKKHHTPTTFLDKLAYWTVKSLRFPTDVFFQKRYGCRAMMLETVAAVP 63

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+++P+WYERALVF VQGV
Sbjct: 64  GMVGGMLLHCKSLRRFEPSGGWIKALLEEAENERMHLMTFMEVSKPRWYERALVFTVQGV 123

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAYLASPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN  APAIAIDYWRLP 
Sbjct: 124 FFNAYFLAYLASPKLAHRIVGYLEEEAIHSYTEFLKELDKGTIENVKAPAIAIDYWRLPA 183

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 184 DSTLRDVVMVVRADE 198


>gi|224118194|ref|XP_002317754.1| predicted protein [Populus trichocarpa]
 gi|222858427|gb|EEE95974.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  335 bits (858), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 154/195 (78%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ADLSIN+TKHH P  + DK AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 112 PWETYSADLSINLTKHHAPVTFLDKMAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 171

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+A P+WYERALV  VQGV
Sbjct: 172 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVANPRWYERALVITVQGV 231

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ +N PAPAIAIDYWRLPP
Sbjct: 232 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIKNVPAPAIAIDYWRLPP 291

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV V+RADE
Sbjct: 292 NSTLRDVVEVVRADE 306


>gi|3023316|sp|Q41224.1|AOX1_TOBAC RecName: Full=Ubiquinol oxidase 1, mitochondrial; AltName:
           Full=Alternative oxidase 1; Flags: Precursor
 gi|558054|gb|AAC60576.1| alternative oxidase [Nicotiana tabacum]
 gi|1090812|prf||2019465A Aox1 gene
          Length = 353

 Score =  334 bits (856), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 153/195 (78%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADLSI++TKHH P  + DKFAYWTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKADLSIDLTKHHAPTTFLDKFAYWTVKSLRYPTDIFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIK LL+EAENERMHLMTF+E+A+P WYERALVFAVQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEQSGGWIKTLLDEAENERMHLMTFMEVAKPNWYERALVFAVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPKLAHRIVGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDY RLP 
Sbjct: 249 FFNAYFVTYLLSPKLAHRIVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYCRLPK 308

Query: 181 DSTLRDVVVVIRADE 195
           DSTL DVV+V+RADE
Sbjct: 309 DSTLLDVVLVVRADE 323


>gi|190710541|gb|ACE95101.1| mitochondrial alternative oxidase precursor [Citrus sinensis]
          Length = 336

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 151/195 (77%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE Y+ADLSI++ KHH P  + DK A WTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 112 PWEAYEADLSIDLKKHHAPTTFSDKMALWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 171

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALVFAVQGV
Sbjct: 172 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVFAVQGV 231

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIA DYWRLPP
Sbjct: 232 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIATDYWRLPP 291

Query: 181 DSTLRDVVVVIRADE 195
           +STL+DVV+V+RADE
Sbjct: 292 NSTLKDVVLVVRADE 306


>gi|327554104|gb|AEB00555.1| mitochondrial alternative oxidase 1a [Brassica juncea]
          Length = 360

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I+++KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 136 PWETYKADLTIDLSKHHVPTTFLDRLAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 195

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 196 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 255

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 256 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 315

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 316 DATLRDVVMVVRADE 330


>gi|82409049|gb|ABB73306.1| alternative oxidase [Gossypium hirsutum]
          Length = 330

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 151/195 (77%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 106 PWDTYQADLSIDLKKHHAPVTVLDKMAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 165

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E++ P+WYERALVFAVQGV
Sbjct: 166 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSDPRWYERALVFAVQGV 225

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL Y+ SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAP IAIDYWRLPP
Sbjct: 226 FFNAYFLGYIISPKFAHRVVGYLEEEAIHSYTEFLKELDNGNIENVPAPPIAIDYWRLPP 285

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV+ +RADE
Sbjct: 286 NSTLRDVVLAVRADE 300


>gi|400530644|gb|AFP86473.1| mitochondrial alternative oxidase [Brassica rapa subsp. chinensis]
          Length = 427

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I+++KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 136 PWETYKADLTIDLSKHHVPTTFLDRLAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 195

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 196 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 255

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 256 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 315

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 316 DATLRDVVMVVRADE 330


>gi|6634501|emb|CAB64356.1| alternative oxidase [Populus tremula x Populus tremuloides]
          Length = 351

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ADLSI++ KHH P  + DK AYW V+AL+FPT LFFQRR+ C AM+LETV AVP
Sbjct: 127 PWETYSADLSIDLKKHHVPATFLDKMAYWMVKALRFPTDLFFQRRYGCRAMMLETVAAVP 186

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 187 GMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVAKPRWYERALVITVQGV 246

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYFL Y+ SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIA+DYWRLPP
Sbjct: 247 FLNAYFLGYIISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAVDYWRLPP 306

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 307 DATLRDVVLVVRADE 321


>gi|224118198|ref|XP_002317755.1| predicted protein [Populus trichocarpa]
 gi|222858428|gb|EEE95975.1| predicted protein [Populus trichocarpa]
          Length = 253

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 152/195 (77%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ADLSIN+TKHH P    D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 29  PWETYSADLSINLTKHHAPVTLLDRMAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 88

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+SLR+FEHSGGWIKALLEEAENERMHLMTF+E++ P+WYERALVF VQGV
Sbjct: 89  GMVGGMLLHCRSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSNPRWYERALVFTVQGV 148

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ +N PAPAIAIDYWRLPP
Sbjct: 149 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIKNVPAPAIAIDYWRLPP 208

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVVV +RADE
Sbjct: 209 NSTLRDVVVAVRADE 223


>gi|312282139|dbj|BAJ33935.1| unnamed protein product [Thellungiella halophila]
          Length = 357

 Score =  331 bits (849), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I+++KHH P  + D+ AYWTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 133 PWETYKADLTIDLSKHHVPTTFLDRLAYWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 192

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 193 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 252

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 253 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 312

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 313 DATLRDVVMVVRADE 327


>gi|291245408|gb|ADD84881.1| mitochondrial AOX1A [Citrullus lanatus]
          Length = 315

 Score =  331 bits (849), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I+++KHH P  + DK AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 104 PWETYKADLTIDLSKHHVPTTFLDKIAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 163

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 164 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 223

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FF+AYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 224 FFSAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 283

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 284 DATLRDVVMVVRADE 298


>gi|357484587|ref|XP_003612581.1| Alternative oxidase [Medicago truncatula]
 gi|355513916|gb|AES95539.1| Alternative oxidase [Medicago truncatula]
          Length = 262

 Score =  331 bits (849), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD++I++TKHHKP  + DK AYWTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 38  PWETYKADVTIDLTKHHKPTTFLDKMAYWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 97

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 98  GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 157

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYW+LP 
Sbjct: 158 FFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPQ 217

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV V+RADE
Sbjct: 218 NSTLRDVVEVVRADE 232


>gi|297830954|ref|XP_002883359.1| hypothetical protein ARALYDRAFT_479749 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329199|gb|EFH59618.1| hypothetical protein ARALYDRAFT_479749 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 354

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 174/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ADL+I++ KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 130 PWETYNADLTIDLKKHHVPTTFLDRLAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 189

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 190 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 249

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 250 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 309

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 310 DATLRDVVIVVRADE 324


>gi|15228734|ref|NP_188876.1| alternative oxidase 1A [Arabidopsis thaliana]
 gi|3915639|sp|Q39219.2|AOX1A_ARATH RecName: Full=Ubiquinol oxidase 1a, mitochondrial; AltName:
           Full=Alternative oxidase 1a; Flags: Precursor
 gi|13877807|gb|AAK43981.1|AF370166_1 putative alternative oxidase 1a precursor [Arabidopsis thaliana]
 gi|2506083|dbj|BAA22625.1| alternative oxidase [Arabidopsis thaliana]
 gi|9293872|dbj|BAB01775.1| alternative oxidase 1a precursor [Arabidopsis thaliana]
 gi|16323480|gb|AAL15234.1| putative alternative oxidase 1a precursor [Arabidopsis thaliana]
 gi|332643106|gb|AEE76627.1| alternative oxidase 1A [Arabidopsis thaliana]
          Length = 354

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD++I++ KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 130 PWETYKADITIDLKKHHVPTTFLDRIAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 189

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 190 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 249

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 250 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 309

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 310 DATLRDVVMVVRADE 324


>gi|357484585|ref|XP_003612580.1| Alternative oxidase [Medicago truncatula]
 gi|355513915|gb|AES95538.1| Alternative oxidase [Medicago truncatula]
          Length = 330

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 176/195 (90%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD++I++TKHHKP  + DK AYWTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 106 PWETYKADVTIDLTKHHKPTTFLDKMAYWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 165

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 166 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 225

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYW+LP 
Sbjct: 226 FFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPQ 285

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV V+RADE
Sbjct: 286 NSTLRDVVEVVRADE 300


>gi|116488305|gb|ABJ98721.1| alternative oxidase [Gossypium hirsutum]
          Length = 331

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 107 PWDTYRADLSIDLKKHHAPVTVLDKMAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 166

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E++ P+WYERALVF+VQGV
Sbjct: 167 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSDPRWYERALVFSVQGV 226

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL Y+ SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAP IAIDYWRL P
Sbjct: 227 FFNAYFLGYIISPKFAHRVVGYLEEEAIHSYTEFLKELDNGNIENVPAPPIAIDYWRLSP 286

Query: 181 DSTLRDVVVVIRADE 195
           +STLRDVV+ +RADE
Sbjct: 287 NSTLRDVVLAVRADE 301


>gi|4006943|emb|CAA10364.1| alternative oxidase [Arabidopsis thaliana]
          Length = 353

 Score =  329 bits (844), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD++I++ KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKADITIDLKKHHVPTTFLDRIAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 249 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 308

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 309 DATLRDVVMVVRADE 323


>gi|166876|gb|AAA32870.1| oxidase [Arabidopsis thaliana]
          Length = 305

 Score =  329 bits (843), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD++I++ KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 81  PWETYKADITIDLKKHHVPTTFLDRIAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 140

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 141 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 200

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 201 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 260

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 261 DATLRDVVMVVRADE 275


>gi|2696032|dbj|BAA23803.1| alternative oxidase [Catharanthus roseus]
          Length = 353

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 151/195 (77%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYK D  I + KHH P    DK A++TV+AL++PT LFFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKPDTDIELKKHHVPVTLLDKVAFFTVKALRWPTDLFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYERALVFAVQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSKPRWYERALVFAVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPKLAHRIVGYLEEEA++SY+EFL +L+ G+ EN PAPAIAIDYW++PP
Sbjct: 249 FFNAYFLTYLASPKLAHRIVGYLEEEAIHSYSEFLNELDKGNIENVPAPAIAIDYWQMPP 308

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 309 DSTLRDVVMVVRADE 323


>gi|12583703|dbj|BAB21500.1| alternative oxidase [Catharanthus roseus]
          Length = 353

 Score =  328 bits (842), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 151/195 (77%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYK D  I + KHH P    DK A++TV+AL++PT LFFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYKPDTDIELKKHHVPVTLLDKVAFFTVKALRWPTDLFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYERALVFAVQGV
Sbjct: 189 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSKPRWYERALVFAVQGV 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YLASPKLAHRIVGYLEEEA++SY+EFL +L+ G+ EN PAPAIAIDYW++PP
Sbjct: 249 FFNAYFLTYLASPKLAHRIVGYLEEEAIHSYSEFLNELDKGNIENVPAPAIAIDYWQMPP 308

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 309 DSTLRDVVMVVRADE 323


>gi|1872517|gb|AAB49302.1| alternative oxidase, partial [Arabidopsis thaliana]
          Length = 287

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD++I++ KHH P  + D+ AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 63  PWETYKADITIDLKKHHVPTTFLDRIAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 122

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 123 GMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 182

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYWRLP 
Sbjct: 183 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWRLPA 242

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 243 DATLRDVVMVVRADE 257


>gi|297830952|ref|XP_002883358.1| hypothetical protein ARALYDRAFT_342380 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329198|gb|EFH59617.1| hypothetical protein ARALYDRAFT_342380 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 324

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 174/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYK+DL+I++ KHH P    DK AYWTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 100 PWETYKSDLTIDLKKHHVPSTLSDKLAYWTVKSLRWPTDVFFQRRYGCRAMMLETVAAVP 159

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGML+HCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALV AVQGV
Sbjct: 160 GMVGGMLVHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVIAVQGV 219

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAPAIAIDYWRL  
Sbjct: 220 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAIDYWRLEA 279

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 280 DATLRDVVMVVRADE 294


>gi|15228729|ref|NP_188875.1| alternative oxidase 1B [Arabidopsis thaliana]
 gi|3913143|sp|O23913.1|AOX1B_ARATH RecName: Full=Ubiquinol oxidase 1b, mitochondrial; AltName:
           Full=Alternative oxidase 1b; Flags: Precursor
 gi|2506082|dbj|BAA22624.1| alternative oxidase [Arabidopsis thaliana]
 gi|9293871|dbj|BAB01774.1| alternative oxidase 1b precursor [Arabidopsis thaliana]
 gi|67633654|gb|AAY78751.1| mitochondrial alternative oxidase 1b [Arabidopsis thaliana]
 gi|332643105|gb|AEE76626.1| alternative oxidase 1B [Arabidopsis thaliana]
          Length = 325

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 149/195 (76%), Positives = 174/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYK+DL+I++ KHH P    DK AYWTV++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 101 PWETYKSDLTIDLKKHHVPSTLPDKLAYWTVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 160

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGML+HCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P WYERALV AVQG+
Sbjct: 161 GMVGGMLVHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPNWYERALVIAVQGI 220

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAPAIAIDYWRL  
Sbjct: 221 FFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAIDYWRLEA 280

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 281 DATLRDVVMVVRADE 295


>gi|70799007|gb|AAZ09196.1| mitochondrial alternative oxidase 1 [Vigna unguiculata]
 gi|70799009|gb|AAZ09197.1| mitochondrial alternative oxidase 1 [Vigna unguiculata]
          Length = 316

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 148/195 (75%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD+SI++ KHH P  + DK A WTV+ L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 92  PWETYKADVSIDLNKHHAPTTFLDKMALWTVKTLRYPTDLFFQRRYGCRAMMLETVAAVP 151

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV GMLLH KSLR+FEHSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 152 GMVAGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 211

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL Y+ SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYW+LPP
Sbjct: 212 FFNAYFLGYMISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPP 271

Query: 181 DSTLRDVVVVIRADE 195
           DSTL+DVV V+RADE
Sbjct: 272 DSTLKDVVTVVRADE 286


>gi|226897261|dbj|BAH56639.1| alternative oxidase 1a [Nelumbo nucifera]
          Length = 344

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADLSI++ KHH P  + DK AYWTV+AL++PT + FQ R+ C AM+LETV AVP
Sbjct: 120 PWETYKADLSIDLKKHHSPVTFMDKLAYWTVKALRYPTDILFQNRYGCRAMMLETVAAVP 179

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 180 GMVGGMLLHLKSLRRFEHSGGWIKTLLEEAENERMHLMTFMEVSQPKWYERALVVAVQGV 239

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN YFL YL SP+ AHR+VGYLEEEA++SYTEFLK+L+ G+ +N PAPAIA+DYW+LPP
Sbjct: 240 FFNTYFLGYLISPRFAHRVVGYLEEEAIHSYTEFLKELDKGNIQNVPAPAIAVDYWQLPP 299

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 300 DSTLRDVVMVVRADE 314


>gi|269784500|dbj|BAI49704.1| alternative oxidase [Lysichiton camtschatcensis]
          Length = 352

 Score =  325 bits (832), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+AD+SI++ KHH P  + DK A+WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 128 PWETYEADMSIDLKKHHAPTTFLDKLAFWTVKSLRYPTDVFFQRRYGCRAMMLETVAAVP 187

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 188 GMVGGLLLHLKSLRRFEHSGGWIKTLLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 247

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++NG+ EN PAPAIA+DYWRLP 
Sbjct: 248 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKEIDNGTIENVPAPAIALDYWRLPQ 307

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 308 GSTLRDVVMVVRADE 322


>gi|242077034|ref|XP_002448453.1| hypothetical protein SORBIDRAFT_06g027410 [Sorghum bicolor]
 gi|241939636|gb|EES12781.1| hypothetical protein SORBIDRAFT_06g027410 [Sorghum bicolor]
          Length = 331

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++T+HH+P+   DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 107 PWETYTADTSIDLTRHHEPKTLMDKIAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 166

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 167 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAKPRWYERALVITVQGV 226

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  EN PAP+IAIDYWRLP 
Sbjct: 227 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPSIAIDYWRLPA 286

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 287 NATLKDVVTVVRADE 301


>gi|162462512|ref|NP_001105180.1| alternative oxidase1 [Zea mays]
 gi|25989199|gb|AAL27796.1| alternative oxidase AOX2 precursor [Zea mays]
 gi|39984776|gb|AAR36136.1| alternative oxidase 1a [Zea mays]
 gi|194707372|gb|ACF87770.1| unknown [Zea mays]
 gi|414585627|tpg|DAA36198.1| TPA: alternative oxidase [Zea mays]
          Length = 329

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++T+HH+P+   DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 105 PWETYTADTSIDLTRHHEPKTLMDKVAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 165 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAKPRWYERALVITVQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 225 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPAIAIDYWRLPA 284

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 285 NATLKDVVTVVRADE 299


>gi|404160475|gb|AFR53081.1| AOX [Anthurium andraeanum]
          Length = 345

 Score =  324 bits (830), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 147/195 (75%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P    DK A+WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 121 PWETYQADLSIDLKKHHAPTTILDKVAFWTVKSLRWPTDVFFQRRYGCRAMMLETVAAVP 180

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+ +P+WYERALV  VQGV
Sbjct: 181 GMVGGMLLHLKSLRRFEHSGGWIKGLLEEAENERMHLMTFMEVVQPRWYERALVMTVQGV 240

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 241 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 300

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+VIRADE
Sbjct: 301 GSTLRDVVMVIRADE 315


>gi|19912725|dbj|BAB88645.1| alternative oxidase [Triticum aestivum]
          Length = 328

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++TKHH P    DK AY+TV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 104 PWETYTADTSIDLTKHHVPNTMLDKIAYYTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 163

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 164 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVIAVQGV 223

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF  YL SPK AHR+VGYLEEEAV+SYTEFLKDL++G  +N PAPAIAIDYWRLP 
Sbjct: 224 FFNAYFFGYLISPKFAHRVVGYLEEEAVHSYTEFLKDLDDGKIDNVPAPAIAIDYWRLPA 283

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 284 NATLKDVVTVVRADE 298


>gi|224135251|ref|XP_002322021.1| predicted protein [Populus trichocarpa]
 gi|222869017|gb|EEF06148.1| predicted protein [Populus trichocarpa]
          Length = 281

 Score =  323 bits (827), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ADLSI++ KHH P    DK A+W V+AL+ PT LFFQRR+ C AM+LETV AVP
Sbjct: 57  PWETYSADLSIDLKKHHVPATVLDKMAFWIVKALRLPTDLFFQRRYGCRAMMLETVAAVP 116

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 117 GMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVAKPRWYERALVITVQGV 176

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYFL Y+ SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIA+DYWRLPP
Sbjct: 177 FLNAYFLGYIISPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAVDYWRLPP 236

Query: 181 DSTLRDVVVVIRADE 195
           ++TLRDVV+V+RADE
Sbjct: 237 NATLRDVVLVVRADE 251


>gi|57157824|dbj|BAD83866.1| skunk cabbage alternative oxidase [Symplocarpus renifolius]
          Length = 349

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P  + DK A+WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 125 PWETYEADLSIDLKKHHAPTTFLDKLAFWTVKSLRYPTDVFFQRRYGCRAMMLETVAAVP 184

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIK LL EAENERMHLMTF+E++ P+WYERALV AVQGV
Sbjct: 185 GMVGGLLLHLKSLRRFEHSGGWIKTLLNEAENERMHLMTFMEVSEPRWYERALVLAVQGV 244

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEF+K+++NG+ EN PAPAIA+DYWRLP 
Sbjct: 245 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFIKEIDNGTIENVPAPAIALDYWRLPQ 304

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 305 GSTLRDVVMVVRADE 319


>gi|195637742|gb|ACG38339.1| transposon protein [Zea mays]
          Length = 329

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++T+H++P+   DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 105 PWETYTADTSIDLTRHYEPKTLMDKVAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 165 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAKPRWYERALVITVQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 225 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPAIAIDYWRLPA 284

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 285 NATLKDVVTVVRADE 299


>gi|351720843|ref|NP_001236166.1| ubiquinol oxidase 1, mitochondrial [Glycine max]
 gi|3334449|sp|Q07185.1|AOX1_SOYBN RecName: Full=Ubiquinol oxidase 1, mitochondrial; AltName:
           Full=Alternative oxidase 1; Flags: Precursor
 gi|395216|emb|CAA48653.1| alternative oxidase [Glycine max]
 gi|740229|prf||2004454A respiratory chain terminal oxidase
          Length = 321

 Score =  322 bits (824), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW TYKADLSI++ KH  P  + DK A+WTV+ L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 97  PWGTYKADLSIDLEKHMPPTTFLDKMAFWTVKVLRYPTDVFFQRRYGCRAMMLETVAAVP 156

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV GMLLHCKSLR+FEHSGGW KALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 157 GMVAGMLLHCKSLRRFEHSGGWFKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGV 216

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+ GYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYW+LPP
Sbjct: 217 FFNAYFLGYLLSPKFAHRMFGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPP 276

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 277 GSTLRDVVMVVRADE 291


>gi|52421172|dbj|BAD51467.1| alternative oxidase [Philodendron bipinnatifidum]
          Length = 345

 Score =  321 bits (823), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 147/195 (75%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE Y+ADLSI++ KHH P  + DK A+ TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 121 PWEAYEADLSIDLKKHHAPTTFLDKMAFRTVRALRWPTDIFFQRRYACRAMMLETVAAVP 180

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 181 GMVGGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 240

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLKD++ G+ +N PAPAIA+DYWRLP 
Sbjct: 241 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIDRGAIKNVPAPAIALDYWRLPQ 300

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+VIRADE
Sbjct: 301 GSTLRDVVMVIRADE 315


>gi|116784421|gb|ABK23336.1| unknown [Picea sitchensis]
          Length = 400

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY  ++SI++ KHH P+ + DKFAYWTV+A++ P  LFF++R+    M+LETV AVP
Sbjct: 176 PWETYTPNMSIDLKKHHVPKTFADKFAYWTVRAMRIPVDLFFKKRYDIRVMMLETVAAVP 235

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLRKF+HS GWIKALLEEAENERMHLMTF+E+ +P W+ERALVFAVQGV
Sbjct: 236 GMVGGMLLHCKSLRKFQHSAGWIKALLEEAENERMHLMTFMEVTKPNWFERALVFAVQGV 295

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN YFL Y+ SPKLAHRIVGYLEEEAV SYTEFLK+L+NG+  N PAPAIAIDYWRLP 
Sbjct: 296 FFNTYFLVYIISPKLAHRIVGYLEEEAVYSYTEFLKELDNGNIPNGPAPAIAIDYWRLPK 355

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 356 DSTLRDVVMVVRADE 370


>gi|357165610|ref|XP_003580438.1| PREDICTED: alternative oxidase 1a, mitochondrial-like [Brachypodium
           distachyon]
          Length = 333

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++TKHH P+   DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 109 PWETYTADTSIDLTKHHVPKTMLDKIAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 168

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 169 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVIAVQGV 228

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF  YL SPK AHR+VGYLEEEAV+SYTEFLKDLE G  ++ PAP+IAIDYWRLP 
Sbjct: 229 FFNAYFFGYLISPKFAHRVVGYLEEEAVHSYTEFLKDLEAGKIDDVPAPSIAIDYWRLPA 288

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 289 NATLKDVVTVVRADE 303


>gi|1588565|prf||2208475A alternative oxidase 1
          Length = 344

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 175/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE Y++D+SI++ KHH P  + DK A+WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 120 PWEAYESDMSIDLKKHHAPTTFLDKMAFWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 179

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 180 GMVGGLLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 239

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ +N PAPAIA+DYWRLPP
Sbjct: 240 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIDNVPAPAIALDYWRLPP 299

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 300 GSTLRDVVMVVRADE 314


>gi|115460316|ref|NP_001053758.1| Os04g0600200 [Oryza sativa Japonica Group]
 gi|3218544|dbj|BAA28772.1| alternative oxidase [Oryza sativa Japonica Group]
 gi|3218546|dbj|BAA28773.1| alternative oxidase [Oryza sativa Japonica Group]
 gi|6467126|dbj|BAA86963.1| alternative oxidase [Oryza sativa (japonica cultivar-group)]
 gi|38345773|emb|CAD41813.2| OSJNBa0083N12.11 [Oryza sativa Japonica Group]
 gi|113565329|dbj|BAF15672.1| Os04g0600200 [Oryza sativa Japonica Group]
 gi|116310914|emb|CAH67852.1| B0403H10-OSIGBa0105A11.4 [Oryza sativa Indica Group]
 gi|125549592|gb|EAY95414.1| hypothetical protein OsI_17254 [Oryza sativa Indica Group]
 gi|125591517|gb|EAZ31867.1| hypothetical protein OsJ_16032 [Oryza sativa Japonica Group]
 gi|215693779|dbj|BAG88978.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 332

 Score =  321 bits (823), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++TKHH P+   DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 108 PWETYTADTSIDLTKHHVPKTLLDKIAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 167

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ LLEEAENERMHLMTF+E+A P+WYERALV  VQGV
Sbjct: 168 GMVGGMLLHLRSLRRFEQSGGWIRTLLEEAENERMHLMTFMEVANPKWYERALVITVQGV 227

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLKDLE G  +N PAPAIAIDYWRLP 
Sbjct: 228 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDLEAGKIDNVPAPAIAIDYWRLPA 287

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 288 NATLKDVVTVVRADE 302


>gi|308153040|dbj|BAJ22109.1| alternative oxidase 1b [Arum maculatum]
          Length = 346

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ DLSI++ KHH P  + DK A WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 122 PWETYEPDLSIDLKKHHAPTTFLDKMALWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 181

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 182 GMVGGLLLHLKSLRRFEHSGGWIKTLLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 241

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 242 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 301

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 302 GSTLRDVVMVVRADE 316


>gi|242062814|ref|XP_002452696.1| hypothetical protein SORBIDRAFT_04g030820 [Sorghum bicolor]
 gi|241932527|gb|EES05672.1| hypothetical protein SORBIDRAFT_04g030820 [Sorghum bicolor]
          Length = 346

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE YK D SI++T+HH+P+   DK AYWTV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 122 PWEAYKPDTSIDLTRHHEPKVLLDKIAYWTVKLLRVPTDIFFQRRYGCRAMMLETVAAVP 181

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 182 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAKPKWYERALVLAVQGV 241

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  EN PAPAIAIDYW+LP 
Sbjct: 242 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPAIAIDYWQLPA 301

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVVVV+R+DE
Sbjct: 302 DATLKDVVVVVRSDE 316


>gi|51860695|gb|AAU11467.1| mitochondrial alternative oxidase 1 [Saccharum officinarum]
          Length = 331

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++T+HH+ +   DK AYWTV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 107 PWETYTADTSIDLTRHHELKTLMDKIAYWTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 166

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 167 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAKPRWYERALVITVQGV 226

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKD+E G  EN PAPAIAIDYWRLP 
Sbjct: 227 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEYLKDVEAGKIENVPAPAIAIDYWRLPA 286

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 287 NATLKDVVTVVRADE 301


>gi|297818362|ref|XP_002877064.1| hypothetical protein ARALYDRAFT_347138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322902|gb|EFH53323.1| hypothetical protein ARALYDRAFT_347138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 330

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/195 (75%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I++ KHH P    DK AYW V++L++PT LFFQRR+ C AM+LETV AVP
Sbjct: 106 PWETYKADLTIDLKKHHVPSTLPDKLAYWMVKSLRWPTDLFFQRRYGCRAMMLETVAAVP 165

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGML+H KSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 166 GMVGGMLMHFKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVIAVQGV 225

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY L YL SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAPAIAIDYWRL  
Sbjct: 226 FFNAYLLGYLISPKFAHRMVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAIDYWRLEA 285

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 286 DATLRDVVMVVRADE 300


>gi|308153048|dbj|BAJ22113.1| alternative oxidase 1f [Arum maculatum]
          Length = 343

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ DLSI++ KHH P  + DK A WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 119 PWETYEPDLSIDLKKHHAPTTFLDKMALWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 178

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 179 GMVGGLLLHLKSLRRFEHSGGWIKTLLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 238

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 239 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 298

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 299 GSTLRDVVMVVRADE 313


>gi|330690264|gb|AEC33278.1| mitochondrial alternative oxidase 1 [Hordeum vulgare subsp.
           spontaneum]
          Length = 328

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI++T HH P    DK AY+TV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 104 PWETYTADTSIDLTTHHMPNTMPDKLAYFTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 163

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV  VQGV
Sbjct: 164 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVIVVQGV 223

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEAV+SYTEFLKDL++G  EN PAPAIAIDYWRLP 
Sbjct: 224 FFNAYFIGYLLSPKFAHRVVGYLEEEAVHSYTEFLKDLDDGKIENVPAPAIAIDYWRLPA 283

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 284 NATLKDVVTVVRADE 298


>gi|308153044|dbj|BAJ22111.1| alternative oxidase 1d [Arum maculatum]
          Length = 343

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 174/195 (89%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 119 PWDTYQADLSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYACRAMMLETVAAVP 178

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+F+HSGGWIKALLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 179 GMVGGVLLHLKSLRRFDHSGGWIKALLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 238

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 239 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 298

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 299 GSTLRDVVMVVRADE 313


>gi|308153042|dbj|BAJ22110.1| alternative oxidase 1c [Arum maculatum]
          Length = 343

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 119 PWDTYQADLSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYACRAMMLETVAAVP 178

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 179 GMVGGLLLHLKSLRRFEHSGGWIKTLLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 238

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 239 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 298

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 299 GSTLRDVVMVVRADE 313


>gi|115448119|ref|NP_001047839.1| Os02g0700400 [Oryza sativa Japonica Group]
 gi|16902306|dbj|BAB71944.1| alternative oxidase 1c [Oryza sativa Japonica Group]
 gi|16902308|dbj|BAB71945.1| alternative oxidase 1c [Oryza sativa Japonica Group]
 gi|41052670|dbj|BAD07517.1| alternative oxidase 1c [Oryza sativa Japonica Group]
 gi|41052978|dbj|BAD07888.1| alternative oxidase 1c [Oryza sativa Japonica Group]
 gi|113537370|dbj|BAF09753.1| Os02g0700400 [Oryza sativa Japonica Group]
 gi|125540792|gb|EAY87187.1| hypothetical protein OsI_08589 [Oryza sativa Indica Group]
          Length = 345

 Score =  319 bits (818), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY  D +I++ KHH+P+   DK AYWTV+AL+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 121 PWETYSPDTTIDLKKHHEPKVLLDKVAYWTVKALRVPTDIFFQRRYGCRAMMLETVAAVP 180

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 181 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAKPRWYERALVLAVQGV 240

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPKLAHR+VGYLEEEA++SYTE+LKD+E G  EN PAP IAIDYWRLP 
Sbjct: 241 FFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIEAGKIENVPAPPIAIDYWRLPA 300

Query: 181 DSTLRDVVVVIRADE 195
            +TL+DVVVV+RADE
Sbjct: 301 GATLKDVVVVVRADE 315


>gi|308153038|dbj|BAJ22108.1| alternative oxidase 1a [Arum maculatum]
          Length = 347

 Score =  318 bits (816), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 123 PWDTYQADLSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYGCRAMMLETVAAVP 182

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWIK LLEEAENERMHLMTF+E+++P+WYERALV AVQGV
Sbjct: 183 GMVGGLLLHLKSLRRFEHSGGWIKTLLEEAENERMHLMTFMEVSQPRWYERALVLAVQGV 242

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 243 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 302

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 303 GSTLRDVVMVVRADE 317


>gi|3599419|gb|AAC35354.1| alternative oxidase precursor [Glycine max]
          Length = 321

 Score =  318 bits (816), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 145/194 (74%), Positives = 169/194 (87%)

Query: 2   WETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPG 61
           W TYKADLSI++ KH  P  + DK A+WTV+ L++PT +FFQRR+ C AM+LETV AVPG
Sbjct: 98  WGTYKADLSIDLEKHMPPTTFLDKMAFWTVKVLRYPTDVFFQRRYGCRAMMLETVAAVPG 157

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MV GM LHCKSLR+FEHSGGW KALLEEAENERMHLMTF+E+A+P+WYERALV  VQGVF
Sbjct: 158 MVAGMQLHCKSLRRFEHSGGWFKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVF 217

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPD 181
           FNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDYW+LPP 
Sbjct: 218 FNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPPG 277

Query: 182 STLRDVVVVIRADE 195
           STLRDVV+V+RADE
Sbjct: 278 STLRDVVMVVRADE 291


>gi|5802557|gb|AAD51707.1| alternative oxidase [Triticum aestivum]
          Length = 274

 Score =  318 bits (814), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD SI+ TKHH P    DK AY+TV++L+FPT +FFQRR+ C AM+LETV AVP
Sbjct: 50  PWETYTADTSIDPTKHHVPNTMLDKIAYYTVKSLRFPTDIFFQRRYGCRAMMLETVAAVP 109

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 110 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVIAVQGV 169

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF  YL SPK AHR+VGYLEEEAV+SYTEFLKDL++G  +N PAPAIAIDYWRLP 
Sbjct: 170 FFNAYFFGYLISPKFAHRVVGYLEEEAVHSYTEFLKDLDDGKIDNVPAPAIAIDYWRLPA 229

Query: 181 DSTLRDVVVVIRADE 195
           ++TL+DVV V+RADE
Sbjct: 230 NATLKDVVTVVRADE 244


>gi|224228409|dbj|BAH23672.1| alternative oxidase [Arum concinnatum]
          Length = 346

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD SI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 122 PWDTYQADFSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYACRAMMLETVAAVP 181

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+F+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 182 GMVGGVLLHLKSLRRFDHSGGWIKALLEEAENERMHLMTFMEVAQPRWYERALVVAVQGV 241

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLK+++ G+ EN PAPAIA+DYWRLPP
Sbjct: 242 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKEIDKGTIENVPAPAIALDYWRLPP 301

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV+V+RADE
Sbjct: 302 GSTLRDVVMVVRADE 316


>gi|162462383|ref|NP_001105179.1| alternative oxidase AOX1 precursor [Zea mays]
 gi|25989197|gb|AAL27795.1| alternative oxidase AOX1 precursor [Zea mays]
 gi|194690594|gb|ACF79381.1| unknown [Zea mays]
 gi|194703950|gb|ACF86059.1| unknown [Zea mays]
 gi|223974129|gb|ACN31252.1| unknown [Zea mays]
 gi|238011470|gb|ACR36770.1| unknown [Zea mays]
 gi|413938400|gb|AFW72951.1| hypothetical protein ZEAMMB73_439635 [Zea mays]
          Length = 347

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE YK D +I++ +HH+P+   DK AYWTV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 123 PWEAYKPDTTIDLNRHHEPKVLLDKIAYWTVKLLRVPTDIFFQRRYGCRAMMLETVAAVP 182

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 183 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAKPKWYERALVLAVQGV 242

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  EN PAPAIAIDYW+LP 
Sbjct: 243 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPAIAIDYWQLPA 302

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVVVV+R+DE
Sbjct: 303 DATLKDVVVVVRSDE 317


>gi|308153046|dbj|BAJ22112.1| alternative oxidase 1e [Arum maculatum]
          Length = 343

 Score =  317 bits (811), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 119 PWDTYQADLSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYACRAMMLETVAAVP 178

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+F+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 179 GMVGGVLLHLKSLRRFDHSGGWIKALLEEAENERMHLMTFMEVAQPRWYERALVVAVQGV 238

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEA++SYTEFLKD+++G+ +N PAPAIA+DYWRLP 
Sbjct: 239 FFNAYFVGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIDSGAIQNTPAPAIALDYWRLPQ 298

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV V+RADE
Sbjct: 299 GSTLRDVVAVVRADE 313


>gi|21216|emb|CAA78823.1| salicylic acid-inducible alternative oxidase [Typhonium venosum]
          Length = 349

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P    DK A  TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 125 PWETYQADLSIDLHKHHVPTTILDKLALRTVKALRWPTDIFFQRRYACRAMMLETVAAVP 184

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 185 GMVGGVLLHLKSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVLAVQGV 244

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLKD++NG+ ++ PAPAIA+DYWRLP 
Sbjct: 245 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIDNGAIQDCPAPAIALDYWRLPQ 304

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV V+RADE
Sbjct: 305 GSTLRDVVTVVRADE 319


>gi|115460318|ref|NP_001053759.1| Os04g0600300 [Oryza sativa Japonica Group]
 gi|3218543|dbj|BAA28771.1| alternative oxidase [Oryza sativa Japonica Group]
 gi|3218548|dbj|BAA28774.1| alternative oxidase [Oryza sativa Japonica Group]
 gi|38345774|emb|CAE03472.2| OSJNBa0083N12.12 [Oryza sativa Japonica Group]
 gi|113565330|dbj|BAF15673.1| Os04g0600300 [Oryza sativa Japonica Group]
 gi|116310915|emb|CAH67853.1| B0403H10-OSIGBa0105A11.5 [Oryza sativa Indica Group]
 gi|125549593|gb|EAY95415.1| hypothetical protein OsI_17255 [Oryza sativa Indica Group]
 gi|125591518|gb|EAZ31868.1| hypothetical protein OsJ_16033 [Oryza sativa Japonica Group]
 gi|215741542|dbj|BAG98037.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 335

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 166/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY +D SI+VTKHH+P+   DK AYWTV++L  P  LFFQRRH  HA+LLETV  VP
Sbjct: 111 PWDTYTSDTSIDVTKHHEPKGLPDKLAYWTVRSLAVPRDLFFQRRHASHALLLETVAGVP 170

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+ +P+W+ERALV A QGV
Sbjct: 171 GMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFLEVMQPRWWERALVLAAQGV 230

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR VGYLEEEAV+SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 231 FFNAYFVGYLVSPKFAHRFVGYLEEEAVSSYTEYLKDLEAGKIENTPAPAIAIDYWRLPA 290

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 291 DATLKDVVTVIRADE 305


>gi|15232222|ref|NP_189399.1| alternative oxidase 1C [Arabidopsis thaliana]
 gi|3913142|sp|O22048.1|AOX1C_ARATH RecName: Full=Ubiquinol oxidase 1c, mitochondrial; AltName:
           Full=Alternative oxidase 1c; Flags: Precursor
 gi|2506049|dbj|BAA22635.1| alternative oxidase [Arabidopsis thaliana]
 gi|9294467|dbj|BAB02686.1| alternative oxidase [Arabidopsis thaliana]
 gi|28393506|gb|AAO42174.1| putative alternative oxidase 1c precursor [Arabidopsis thaliana]
 gi|28973125|gb|AAO63887.1| putative alternative oxidase 1c precursor [Arabidopsis thaliana]
 gi|332643824|gb|AEE77345.1| alternative oxidase 1C [Arabidopsis thaliana]
          Length = 329

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKADL+I++ KHH P    DK AYW V++L++PT LFFQRR+ C A++LETV AVP
Sbjct: 105 PWETYKADLTIDLKKHHVPSTLPDKIAYWMVKSLRWPTDLFFQRRYGCRAIMLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGML+H KSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV +VQGV
Sbjct: 165 GMVGGMLMHFKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVISVQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY + Y+ SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAPAIA+DYWRL  
Sbjct: 225 FFNAYLIGYIISPKFAHRMVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAVDYWRLEA 284

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 285 DATLRDVVMVVRADE 299


>gi|51860699|gb|AAU11469.1| mitochondrial alternative oxidase 1c [Saccharum officinarum]
          Length = 239

 Score =  315 bits (808), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE YK D SI++T+HH+P+   DK AYWTV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 15  PWEAYKPDTSIDLTRHHEPKVLLDKIAYWTVKLLRVPTDIFFQRRYGCRAMMLETVAAVP 74

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 75  GMVGGMLLHLRSLRRFEPSGGWIRALLEEAENERMHLMTFMEVAKPKWYERALVLAVQGV 134

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  EN PAPAIAIDYW+LP 
Sbjct: 135 FFNAYFLGYLISPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIENVPAPAIAIDYWQLPA 194

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV+V+R+DE
Sbjct: 195 DATLKDVVIVVRSDE 209


>gi|323575420|dbj|BAJ78238.1| alternative oxidase 1g [Arum maculatum]
          Length = 343

 Score =  315 bits (806), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 119 PWDTYQADLSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYACRAMMLETVAAVP 178

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+F+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 179 GMVGGVLLHLKSLRRFDHSGGWIKALLEEAENERMHLMTFMEVAQPRWYERALVVAVQGV 238

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEA++SYTEFLKD+++G+ ++ PAPAIA+DYWRLP 
Sbjct: 239 FFNAYFVGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIDSGAIQDTPAPAIALDYWRLPQ 298

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV V+RADE
Sbjct: 299 GSTLRDVVAVVRADE 313


>gi|224228411|dbj|BAH23673.1| alternative oxidase [Arum concinnatum]
          Length = 346

 Score =  315 bits (806), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 173/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A +TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 122 PWDTYQADLSIDLQKHHAPTTILDKLALYTVKALRWPTDIFFQRRYACRAMMLETVAAVP 181

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+F+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 182 GMVGGVLLHLKSLRRFDHSGGWIKALLEEAENERMHLMTFMEVAQPRWYERALVVAVQGV 241

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEA++SYTEFLKD+++G+ ++ PAPAIA+DYWRLP 
Sbjct: 242 FFNAYFVGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIDSGAIQDTPAPAIALDYWRLPQ 301

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV V+RADE
Sbjct: 302 GSTLRDVVAVVRADE 316


>gi|113982|sp|P22185.1|AOX1_TYPVN RecName: Full=Ubiquinol oxidase 1, mitochondrial; AltName:
           Full=Alternative oxidase 1; Flags: Precursor
 gi|170165|gb|AAA34048.1| alternative oxidase protein [Typhonium venosum]
          Length = 349

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P    DK A  TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 125 PWETYQADLSIDLHKHHVPTTILDKLALRTVKALRWPTDIFFQRRYACRAMMLETVAAVP 184

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+LLH KSLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 185 GMVGGVLLHLKSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVLAVQGV 244

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLKD+++G+ ++ PAPAIA+DYWRLP 
Sbjct: 245 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIDSGAIQDCPAPAIALDYWRLPQ 304

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV V+RADE
Sbjct: 305 GSTLRDVVTVVRADE 319


>gi|52421168|dbj|BAD51465.1| alternative oxidase [Dracunculus vulgaris]
          Length = 338

 Score =  314 bits (805), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 172/195 (88%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ADLSI++ KHH P    DK A  TV+AL++PT +FFQRR+ C AM+LETV AVP
Sbjct: 114 PWDTYQADLSIDLQKHHAPTTILDKLALCTVKALRWPTDIFFQRRYACRAMMLETVAAVP 173

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG++LH KSLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 174 GMVGGVVLHLKSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAQPRWYERALVLAVQGV 233

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEA++SYTEFLKD+E+G  +++PAPAIA+DYWRLP 
Sbjct: 234 FFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEFLKDIESGVIQDSPAPAIALDYWRLPQ 293

Query: 181 DSTLRDVVVVIRADE 195
            STLRDVV V+RADE
Sbjct: 294 GSTLRDVVTVVRADE 308


>gi|242077036|ref|XP_002448454.1| hypothetical protein SORBIDRAFT_06g027420 [Sorghum bicolor]
 gi|241939637|gb|EES12782.1| hypothetical protein SORBIDRAFT_06g027420 [Sorghum bicolor]
          Length = 314

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 168/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD SI++ KHH+P+   DK AYW V++L  P  LFFQRRH  HA+LLETV AVP
Sbjct: 90  PWDTYRADTSIDMKKHHEPKALPDKLAYWLVKSLIVPKQLFFQRRHASHALLLETVAAVP 149

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH  SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+W+ERALV A QGV
Sbjct: 150 GMVGGMLLHLGSLRRFEHSGGWIRALLEEAENERMHLMTFLEVAQPKWWERALVLAAQGV 209

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+AYLASPK AHR VGYLEEEAV+SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 210 FFNAYFVAYLASPKFAHRFVGYLEEEAVHSYTEYLKDLEAGVIENTPAPAIAIDYWRLPA 269

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 270 DAKLKDVVTVVRADE 284


>gi|171198301|gb|ACB45425.1| mitochondrial alternative oxidase 2 [Vitis vinifera]
          Length = 320

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD +I+++KHH P+ + DK AY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 96  PWETYHADTAIDLSKHHVPKTFADKVAYRTVKLLRIPTDIFFQRRYGCRAMMLETVAAVP 155

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKFEHSGGW+KALLEEAENERMHLMT +EL RP+WYER LV  VQGV
Sbjct: 156 GMVGGMLLHLRSLRKFEHSGGWVKALLEEAENERMHLMTMVELVRPKWYERLLVLTVQGV 215

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK AHR+VGYLEEEA++SYTEFLKD+++G+ EN PAPAIAIDYWRLP 
Sbjct: 216 FFNAFFVLYVLSPKAAHRVVGYLEEEAIHSYTEFLKDIDSGAIENVPAPAIAIDYWRLPK 275

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DV+ VIRADE
Sbjct: 276 DATLKDVITVIRADE 290


>gi|225448273|ref|XP_002274470.1| PREDICTED: alternative oxidase, mitochondrial [Vitis vinifera]
          Length = 320

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD +I+++KHH P+ + DK AY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 96  PWETYHADTAIDLSKHHVPKTFVDKVAYRTVKLLRIPTDIFFQRRYGCRAMMLETVAAVP 155

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKFEHSGGW+KALLEEAENERMHLMT +EL RP+WYER LV  VQGV
Sbjct: 156 GMVGGMLLHLRSLRKFEHSGGWVKALLEEAENERMHLMTMVELVRPKWYERLLVLTVQGV 215

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK AHR+VGYLEEEA++SYTEFLKD+++G+ EN PAPAIAIDYWRLP 
Sbjct: 216 FFNAFFVLYVLSPKAAHRVVGYLEEEAIHSYTEFLKDIDSGAIENVPAPAIAIDYWRLPK 275

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DV+ VIRADE
Sbjct: 276 DATLKDVITVIRADE 290


>gi|226498802|ref|NP_001147743.1| transposon protein [Zea mays]
 gi|195613414|gb|ACG28537.1| transposon protein [Zea mays]
 gi|414585626|tpg|DAA36197.1| TPA: alternative oxidase [Zea mays]
          Length = 329

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD SI++ KHH+P+   DK AYW V++L  P  LFFQRRH  HA+LLETV AVP
Sbjct: 105 PWDTYRADTSIDMKKHHEPKALPDKLAYWLVKSLVVPKQLFFQRRHASHALLLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+W+ERALV A QGV
Sbjct: 165 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFLEVAQPKWWERALVLAAQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           +FNAYF+AYLASPK AHR VGYLEEEAV+SYTE+LKDLE G  +N PAPAIAIDYWRLP 
Sbjct: 225 YFNAYFVAYLASPKFAHRFVGYLEEEAVHSYTEYLKDLEAGIIDNTPAPAIAIDYWRLPA 284

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 285 DARLKDVVAVVRADE 299


>gi|291245406|gb|ADD84880.1| mitochondrial AOX2 [Citrullus lanatus]
          Length = 349

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 168/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH+P+ + DK AY  V+ L+ PT +FFQRR+ C A++LETV AVP
Sbjct: 125 PWETYRADLSIDLGKHHEPKTFLDKVAYRVVKLLRIPTDIFFQRRYGCRAVMLETVAAVP 184

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT IEL +P+WYER LV  VQGV
Sbjct: 185 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMIELVQPKWYERLLVITVQGV 244

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPKLAHRIVGYLEEEA++SYTE+LKD++ G  EN PAPAIAIDYWRLP 
Sbjct: 245 FFNAFFVLYLMSPKLAHRIVGYLEEEAIHSYTEYLKDIDEGKIENVPAPAIAIDYWRLPK 304

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 305 DARLKDVITVIRADE 319


>gi|344190170|gb|AEM97867.1| mitochondrial alternative oxidase 1A [Corylus heterophylla]
          Length = 326

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 145/195 (74%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+YKADLSI++ KHH P+ + DK AY TV+ L+ PT +FF+RR+ C AM+LETV AVP
Sbjct: 102 PWESYKADLSIDLQKHHVPKVFLDKVAYRTVKLLRIPTDIFFKRRYGCRAMMLETVAAVP 161

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKFEHSGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQGV
Sbjct: 162 GMVGGMLLHLRSLRKFEHSGGWIKALLEEAENERMHLMTMVELVKPKWYERLLVLTVQGV 221

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+AYL SPKLAHRIVGYLEEEA++SYTE+LKD+ +G+ EN  APAIAIDYW+LP 
Sbjct: 222 FFNAYFIAYLLSPKLAHRIVGYLEEEAIHSYTEYLKDITSGAIENVQAPAIAIDYWKLPK 281

Query: 181 DSTLRDVVVVIRADE 195
           D+TL DVV VIRADE
Sbjct: 282 DATLEDVVTVIRADE 296


>gi|122058944|gb|ABM66368.1| mitochondrial alternative oxidase 2a [Vigna unguiculata]
          Length = 329

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ++LSI++TKHH P+N+ DK AY TV+ L+ PT LFFQRR+ C AM+LETV AVP
Sbjct: 105 PWETYHSNLSIDLTKHHVPKNFLDKVAYRTVKLLRIPTDLFFQRRYGCRAMMLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKAL+EEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 165 GMVGGMLLHLRSLRKFQQSGGWIKALMEEAENERMHLMTMVELVKPKWYERLLVIAVQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK+AHRIVGYLEEEA++SYTE+LKD+E+G+ EN PAPAIAIDYWRLP 
Sbjct: 225 FFNAFFVLYILSPKVAHRIVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPK 284

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 285 DAKLKDVITVIRADE 299


>gi|14572654|emb|CAC42836.1| putative alternative oxidase [Vigna unguiculata]
          Length = 329

 Score =  312 bits (800), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY ++LSI++TKHH P+N+ DK AY TV+ L+ PT LFFQRR+ C AM+LETV AVP
Sbjct: 105 PWETYHSNLSIDLTKHHVPKNFLDKVAYRTVKLLRIPTDLFFQRRYGCRAMMLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKAL+EEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 165 GMVGGMLLHLRSLRKFQQSGGWIKALMEEAENERMHLMTMVELVKPKWYERLLVIAVQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK+AHRIVGYLEEEA++SYTE+LKD+E+G+ EN PAPAIAIDYWRLP 
Sbjct: 225 FFNAFFVLYILSPKVAHRIVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPK 284

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 285 DAKLKDVITVIRADE 299


>gi|89474873|gb|AAP33163.2| mitochondrial alternative oxidase 2 [Cucumis sativus]
          Length = 346

 Score =  312 bits (800), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH+P+ + DK AY  V+ L+ PT +FFQRR+ C A++LETV AVP
Sbjct: 122 PWETYRADLSIDLGKHHQPKTFLDKVAYRVVKLLRIPTDIFFQRRYGCRAVMLETVAAVP 181

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT IEL +P+WYER LV  VQGV
Sbjct: 182 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMIELVQPKWYERLLVITVQGV 241

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPKLAHRIVGYLEEEA++SYTE+LKD+  G  EN PAPAIAIDYWRLP 
Sbjct: 242 FFNAFFVLYLMSPKLAHRIVGYLEEEAIHSYTEYLKDINEGKIENVPAPAIAIDYWRLPK 301

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 302 DARLKDVITVIRADE 316


>gi|488826|emb|CAA55892.1| alternative oxidase [Mangifera indica]
          Length = 274

 Score =  312 bits (800), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY++DLSI++ KHH P  + DKFAY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 50  PWETYRSDLSIDLKKHHVPRTFMDKFAYRTVKILRVPTDIFFQRRYGCRAMMLETVAAVP 109

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRK E SGGWIKALLEEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 110 GMVGGMLLHLKSLRKLEQSGGWIKALLEEAENERMHLMTMVELVQPKWYERLLVLAVQGV 169

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN++F+ Y+ SPKLAHRIVGYLEEEA++SYTE+LKD+++G+ +N PAPAIAIDYWRLP 
Sbjct: 170 FFNSFFVLYVLSPKLAHRIVGYLEEEAIHSYTEYLKDIDSGAIKNIPAPAIAIDYWRLPK 229

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DV+ V+RADE
Sbjct: 230 DATLKDVITVVRADE 244


>gi|296086812|emb|CBI32961.3| unnamed protein product [Vitis vinifera]
          Length = 327

 Score =  312 bits (799), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY AD +I+++KHH P+ + DK AY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 103 PWETYHADTAIDLSKHHVPKTFVDKVAYRTVKLLRIPTDIFFQRRYGCRAMMLETVAAVP 162

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKFEHSGGW+KALLEEAENERMHLMT +EL RP+WYER LV  VQGV
Sbjct: 163 GMVGGMLLHLRSLRKFEHSGGWVKALLEEAENERMHLMTMVELVRPKWYERLLVLTVQGV 222

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK AHR+VGYLEEEA++SYTEFLKD+++G+ EN PAPAIAIDYWRLP 
Sbjct: 223 FFNAFFVLYVLSPKAAHRVVGYLEEEAIHSYTEFLKDIDSGAIENVPAPAIAIDYWRLPK 282

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DV+ VIRADE
Sbjct: 283 DATLKDVITVIRADE 297


>gi|449438777|ref|XP_004137164.1| PREDICTED: ubiquinol oxidase, mitochondrial-like [Cucumis sativus]
 gi|449532455|ref|XP_004173196.1| PREDICTED: ubiquinol oxidase, mitochondrial-like [Cucumis sativus]
          Length = 346

 Score =  312 bits (799), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH+P+ + DK AY  V+ L+ PT +FFQRR+ C A++LETV AVP
Sbjct: 122 PWETYRADLSIDLGKHHQPKTFLDKVAYRVVKLLRIPTDIFFQRRYGCRAVMLETVAAVP 181

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT IEL +P+WYER LV  VQGV
Sbjct: 182 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMIELVQPKWYERLLVITVQGV 241

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPKLAHRIVGYLEEEA++SYTE+LKD+  G  EN PAPAIAIDYWRLP 
Sbjct: 242 FFNAFFVLYLMSPKLAHRIVGYLEEEAIHSYTEYLKDINEGKIENVPAPAIAIDYWRLPK 301

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 302 DARLKDVITVIRADE 316


>gi|3915618|sp|Q40294.2|AOX1_MANIN RecName: Full=Ubiquinol oxidase, mitochondrial; AltName:
           Full=Alternative oxidase; Flags: Precursor
          Length = 318

 Score =  311 bits (798), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY++DLSI++ KHH P  + DKFAY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 94  PWETYRSDLSIDLKKHHVPRTFMDKFAYRTVKILRVPTDIFFQRRYGCRAMMLETVAAVP 153

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRK E SGGWIKALLEEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 154 GMVGGMLLHLKSLRKLEQSGGWIKALLEEAENERMHLMTMVELVQPKWYERLLVLAVQGV 213

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN++F+ Y+ SPKLAHRIVGYLEEEA++SYTE+LKD+++G+ +N PAPAIAIDYWRLP 
Sbjct: 214 FFNSFFVLYVLSPKLAHRIVGYLEEEAIHSYTEYLKDIDSGAIKNIPAPAIAIDYWRLPK 273

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DV+ V+RADE
Sbjct: 274 DATLKDVITVVRADE 288


>gi|225571963|gb|ABZ81230.2| mitochondrial alternative oxidase 2b [Daucus carota]
          Length = 319

 Score =  311 bits (798), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 170/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+AD+SI++ KHHKP+ + DK AY TV+ L+ PT + F+RR+ C AM+LETV AVP
Sbjct: 95  PWETYQADVSIDLNKHHKPKGFLDKMAYKTVKLLRLPTDILFKRRYGCRAMMLETVAAVP 154

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT +EL +P+W+ER LV AVQGV
Sbjct: 155 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELVQPKWHERLLVLAVQGV 214

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPKLAHRIVGYLEEEA++SYTE+LKD++ G  EN PAPAI+IDYWRLP 
Sbjct: 215 FFNAFFVLYILSPKLAHRIVGYLEEEAIHSYTEYLKDIDRGLIENVPAPAISIDYWRLPQ 274

Query: 181 DSTLRDVVVVIRADE 195
           D+ LRDV++VIRADE
Sbjct: 275 DAKLRDVILVIRADE 289


>gi|19912727|dbj|BAB88646.1| alternative oxidase [Triticum aestivum]
          Length = 347

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE Y +D +I+++KHHKP+   DK AYWTV++L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 123 PWEAYTSDTTIDLSKHHKPKVLLDKIAYWTVKSLRVPTDIFFQRRYGCRAMMLETVAAVP 182

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV GMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A P+WYERALV AVQGV
Sbjct: 183 GMVDGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVANPKWYERALVLAVQGV 242

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL Y+ SPK AHR+VGYLEEEA++SYTEFL+DLE G  EN PAP IAIDYWRLP 
Sbjct: 243 FFNAYFLGYIVSPKFAHRVVGYLEEEAIHSYTEFLRDLEAGRIENVPAPRIAIDYWRLPA 302

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 303 DARLKDVVTVVRADE 317


>gi|9759397|dbj|BAB09852.1| alternative oxidase 2 [Arabidopsis thaliana]
          Length = 282

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 168/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+A+LSI++ KHH P+N  DK AY  V+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 58  PWETYQANLSIDLKKHHVPKNIADKVAYRIVKLLRIPTDIFFQRRYGCRAMMLETVAAVP 117

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KS+RKFEHSGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQG+
Sbjct: 118 GMVGGMLLHLKSIRKFEHSGGWIKALLEEAENERMHLMTMMELVKPKWYERLLVMLVQGI 177

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN++F+ Y+ SP+LAHR+VGYLEEEA++SYTEFLKD++NG  EN  APAIAIDYWRLP 
Sbjct: 178 FFNSFFVCYVISPRLAHRVVGYLEEEAIHSYTEFLKDIDNGKIENVAAPAIAIDYWRLPK 237

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 238 DATLKDVVTVIRADE 252


>gi|357137162|ref|XP_003570170.1| PREDICTED: alternative oxidase 1a, mitochondrial-like [Brachypodium
           distachyon]
          Length = 343

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 146/195 (74%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE Y +D +I++ KHH+P+   DK AYWTV++L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 119 PWEAYTSDTTIDLKKHHEPKVLLDKIAYWTVKSLRVPTDIFFQRRYGCRAMMLETVAAVP 178

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A P+WYERALV AVQGV
Sbjct: 179 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAGPKWYERALVLAVQGV 238

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEAV+SYTEFL+D+E G  +N PAP IAIDYWRLPP
Sbjct: 239 FFNAYFLGYLLSPKFAHRVVGYLEEEAVHSYTEFLRDIEAGKIDNVPAPRIAIDYWRLPP 298

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVVVV+RADE
Sbjct: 299 DATLRDVVVVVRADE 313


>gi|283488059|gb|ADB24723.1| mitochondrial alternative oxidase 2a [Daucus carota]
 gi|283488061|gb|ADB24724.1| mitochondrial alternative oxidase 2a [Daucus carota]
          Length = 338

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 140/195 (71%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P+ + DK AY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 114 PWETYQADLSIDLGKHHVPKTFLDKVAYKTVKLLRIPTDVFFQRRYGCRAMMLETVAAVP 173

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQGV
Sbjct: 174 GMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVKPKWYERFLVLTVQGV 233

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK+AHR+VGYLEEEA++SYTE+LKD+E+G+ EN PAPAIAIDYWRLP 
Sbjct: 234 FFNAFFVLYMMSPKVAHRVVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPK 293

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 294 DAKLKDVITVIRADE 308


>gi|225571961|gb|ABZ81229.2| mitochondrial alternative oxidase 2a [Daucus carota]
          Length = 329

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 140/195 (71%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH P+ + DK AY TV+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 105 PWETYQADLSIDLGKHHVPKTFLDKVAYKTVKLLRIPTDVFFQRRYGCRAMMLETVAAVP 164

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQGV
Sbjct: 165 GMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVKPKWYERFLVLTVQGV 224

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK+AHR+VGYLEEEA++SYTE+LKD+E+G+ EN PAPAIAIDYWRLP 
Sbjct: 225 FFNAFFVLYMMSPKVAHRVVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPK 284

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 285 DAKLKDVITVIRADE 299


>gi|302782061|ref|XP_002972804.1| hypothetical protein SELMODRAFT_232012 [Selaginella moellendorffii]
 gi|300159405|gb|EFJ26025.1| hypothetical protein SELMODRAFT_232012 [Selaginella moellendorffii]
          Length = 302

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P E Y  DL+I++ KHH P +  DK AYWTV+ L+ PT +FFQRR+ C AM+LETV  VP
Sbjct: 78  PTEAYAPDLTIDLKKHHNPVSVVDKLAYWTVKTLRIPTDIFFQRRYGCRAMMLETVAGVP 137

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+ +P+WYERALVF VQGV
Sbjct: 138 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVVQPKWYERALVFTVQGV 197

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL Y+  P+LAHRIVGYLEEEA++SYTE+LK+++ G+  NAPAPAIAIDYWRLP 
Sbjct: 198 FFNAYFLCYVLFPRLAHRIVGYLEEEAIHSYTEYLKEIDKGTIPNAPAPAIAIDYWRLPK 257

Query: 181 DSTLRDVVVVIRADE 195
           D+ +RDVV V+RADE
Sbjct: 258 DAKMRDVVEVVRADE 272


>gi|30697967|ref|NP_201226.2| alternative oxidase 2 [Arabidopsis thaliana]
 gi|21264382|sp|O22049.2|AOX2_ARATH RecName: Full=Ubiquinol oxidase 2, mitochondrial; AltName:
           Full=Alternative oxidase 2; Flags: Precursor
 gi|15216224|dbj|BAA22636.2| alternative oxidase [Arabidopsis thaliana]
 gi|67633916|gb|AAY78882.1| mitochondrial alternative oxidase 2 [Arabidopsis thaliana]
 gi|332010472|gb|AED97855.1| alternative oxidase 2 [Arabidopsis thaliana]
          Length = 353

 Score =  310 bits (795), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 168/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+A+LSI++ KHH P+N  DK AY  V+ L+ PT +FFQRR+ C AM+LETV AVP
Sbjct: 129 PWETYQANLSIDLKKHHVPKNIADKVAYRIVKLLRIPTDIFFQRRYGCRAMMLETVAAVP 188

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KS+RKFEHSGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQG+
Sbjct: 189 GMVGGMLLHLKSIRKFEHSGGWIKALLEEAENERMHLMTMMELVKPKWYERLLVMLVQGI 248

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN++F+ Y+ SP+LAHR+VGYLEEEA++SYTEFLKD++NG  EN  APAIAIDYWRLP 
Sbjct: 249 FFNSFFVCYVISPRLAHRVVGYLEEEAIHSYTEFLKDIDNGKIENVAAPAIAIDYWRLPK 308

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 309 DATLKDVVTVIRADE 323


>gi|357165631|ref|XP_003580445.1| PREDICTED: alternative oxidase 1b, mitochondrial-like [Brachypodium
           distachyon]
          Length = 324

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 166/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY AD +I++ KHH+P++  DK AY+TV+ L  P  LFFQRRH  HA+LLETV AVP
Sbjct: 100 PWDTYTADTAIDMQKHHEPKSLPDKIAYYTVKTLGVPKDLFFQRRHASHALLLETVAAVP 159

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
            MVGGMLLH +SLR+FEHSGGWI+AL+EEAENERMHLMTF+E+ +P+W+ERALV AVQGV
Sbjct: 160 PMVGGMLLHLRSLRRFEHSGGWIRALMEEAENERMHLMTFLEVTQPKWWERALVMAVQGV 219

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR VGYLEEEAV SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 220 FFNAYFVGYLVSPKFAHRFVGYLEEEAVKSYTEYLKDLEAGKIENTPAPAIAIDYWRLPA 279

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV V+RADE
Sbjct: 280 DATLKDVVAVVRADE 294


>gi|357165634|ref|XP_003580446.1| PREDICTED: alternative oxidase 1a, mitochondrial-like [Brachypodium
           distachyon]
          Length = 330

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 166/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD SI++ KHHKP++  DK AY+ V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 106 PWDTYRADTSIDMEKHHKPKSVPDKVAYYAVRSLRVPMDLFFQRRHASHALLLETVAAVP 165

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
            MVGGMLLH +SLR+FEHSGGWI+AL+EEAENERMHLMTF+E+ +P W+ERALV A QGV
Sbjct: 166 PMVGGMLLHLRSLRRFEHSGGWIRALMEEAENERMHLMTFLEVTQPNWWERALVMAAQGV 225

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F NAYF+ YL SPK AHR VGYLEEEAV+SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 226 FVNAYFVGYLVSPKFAHRFVGYLEEEAVHSYTEYLKDLEAGKIENTPAPAIAIDYWRLPA 285

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 286 DATLKDVVTVIRADE 300


>gi|351724097|ref|NP_001235766.1| ubiquinol oxidase 2, mitochondrial [Glycine max]
 gi|3913067|sp|Q41266.2|AOX2_SOYBN RecName: Full=Ubiquinol oxidase 2, mitochondrial; AltName:
           Full=Alternative oxidase 2; Flags: Precursor
 gi|1946336|gb|AAB97285.1| alternative oxidase 2a [Glycine max]
          Length = 333

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+Y++++SI++TKHH P+N  DK AY TV+ L+ PT LFF+RR+ C AM+LETV AVP
Sbjct: 109 PWESYRSNVSIDLTKHHVPKNVLDKVAYRTVKLLRIPTDLFFKRRYGCRAMMLETVAAVP 168

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKALLEEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 169 GMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVKPKWYERLLVLAVQGV 228

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK+AHRIVGYLEEEA++SYTE+LKDLE+G+ EN PAPAIAIDYWRLP 
Sbjct: 229 FFNAFFVLYILSPKVAHRIVGYLEEEAIHSYTEYLKDLESGAIENVPAPAIAIDYWRLPK 288

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 289 DARLKDVITVIRADE 303


>gi|32130599|gb|AAP68984.1| alternative oxidase 2a [Glycine max]
          Length = 333

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 171/195 (87%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+Y++++SI++TKHH P+N  DK AY TV+ L+ PT LFF+RR+ C AM+LETV AVP
Sbjct: 109 PWESYRSNVSIDLTKHHVPKNVLDKVAYRTVKLLRIPTDLFFKRRYGCRAMMLETVAAVP 168

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKALLEEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 169 GMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVKPKWYERLLVLAVQGV 228

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK+AHRIVGYLEEEA++SYTE+LKDLE+G+ EN PAPAIAIDYWRLP 
Sbjct: 229 FFNAFFVLYILSPKVAHRIVGYLEEEAIHSYTEYLKDLESGAIENVPAPAIAIDYWRLPK 288

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 289 DARLKDVITVIRADE 303


>gi|345505255|gb|AEN99850.1| mitochondrial AOX2 [Citrullus lanatus]
          Length = 349

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+ADLSI++ KHH+P+ + DK AY  V+ L+ PT +FFQRR+ C A++LETV AVP
Sbjct: 125 PWETYRADLSIDLGKHHEPKTFLDKVAYRVVKLLRIPTDIFFQRRYGCRAVMLETVAAVP 184

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSG WIKALLEEAENERMHLMT IEL +P+WYER LV  VQGV
Sbjct: 185 GMVGGMLLHLKSLRKFQHSGVWIKALLEEAENERMHLMTMIELVQPKWYERLLVITVQGV 244

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPKLAHRIVGYLEEEA++SYTE+LKD++ G  EN PAPAIAIDYWRLP 
Sbjct: 245 FFNAFFVLYLMSPKLAHRIVGYLEEEAIHSYTEYLKDIDEGKIENVPAPAIAIDYWRLPK 304

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DV+ VIRADE
Sbjct: 305 DARLKDVITVIRADE 319


>gi|302805258|ref|XP_002984380.1| hypothetical protein SELMODRAFT_180978 [Selaginella moellendorffii]
 gi|300147768|gb|EFJ14430.1| hypothetical protein SELMODRAFT_180978 [Selaginella moellendorffii]
          Length = 335

 Score =  308 bits (790), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 166/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P E Y  DL+I++ KHH P +  DK AYWTV+ L+ PT +FFQRR+ C AM+LETV  VP
Sbjct: 111 PTEAYAPDLTIDLKKHHNPVSVVDKLAYWTVKTLRIPTDIFFQRRYGCRAMMLETVAGVP 170

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+ +P+WYERALVF VQGV
Sbjct: 171 GMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVVQPKWYERALVFTVQGV 230

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL Y+  P+LAHRIVGYLEEEA++SYT++LK+++ G+  N PAPAIAIDYWRLP 
Sbjct: 231 FFNAYFLCYVLFPRLAHRIVGYLEEEAIHSYTQYLKEIDKGTIPNVPAPAIAIDYWRLPK 290

Query: 181 DSTLRDVVVVIRADE 195
           D+ +RDVV V+RADE
Sbjct: 291 DAKMRDVVEVVRADE 305


>gi|51860697|gb|AAU11468.1| mitochondrial alternative oxidase 1b [Saccharum officinarum]
          Length = 285

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD SI++ KHH+P+   DK AYW V++L  P  LFFQRRH  HA+LLETV AVP
Sbjct: 61  PWDTYRADTSIDMKKHHEPKALLDKLAYWLVKSLVVPKQLFFQRRHASHALLLETVAAVP 120

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHS GWI+ALLEEAENERMHLMTF+E+A+P+W+ERALV A QGV
Sbjct: 121 GMVGGMLLHLRSLRRFEHSDGWIRALLEEAENERMHLMTFLEVAQPKWWERALVLAAQGV 180

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           +FNAYF+AYLASPK AHR VGYLEEEAV+SYTE+LKDLE G  +N P PAIAIDYWRLP 
Sbjct: 181 YFNAYFVAYLASPKFAHRFVGYLEEEAVHSYTEYLKDLEAGIIDNTPVPAIAIDYWRLPA 240

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV ++RADE
Sbjct: 241 DAKLKDVVTIVRADE 255


>gi|125581850|gb|EAZ22781.1| hypothetical protein OsJ_06456 [Oryza sativa Japonica Group]
          Length = 404

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD++I++TKHH P    DK A WTV++L++P  LFFQRR+ C AM+LETV AVP
Sbjct: 180 PWDTYEADVAIDLTKHHNPATLGDKVARWTVKSLRWPVDLFFQRRYGCRAMMLETVAAVP 239

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV G +LH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+++P+WYERALV AVQG 
Sbjct: 240 GMVAGAVLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVSQPRWYERALVVAVQGA 299

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY  +YL SP+ AHRIVGYLEEEAV+SYTEFL+DL+ G  ++ PAPAIAIDYWRLP 
Sbjct: 300 FFNAYLASYLLSPRFAHRIVGYLEEEAVHSYTEFLRDLDAGKIDDVPAPAIAIDYWRLPA 359

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 360 DATLRDVVMVVRADE 374


>gi|125539183|gb|EAY85578.1| hypothetical protein OsI_06950 [Oryza sativa Indica Group]
          Length = 339

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD++I++TKHH P    DK A WTV++L++P  LFFQRR+ C AM+LETV AVP
Sbjct: 115 PWDTYEADVAIDLTKHHNPATLGDKVARWTVKSLRWPVDLFFQRRYGCRAMMLETVAAVP 174

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV G +LH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+++P+WYERALV AVQG 
Sbjct: 175 GMVAGAVLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVSQPRWYERALVVAVQGA 234

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY  +YL SP+ AHRIVGYLEEEAV+SYTEFL+DL+ G  ++ PAPAIAIDYWRLP 
Sbjct: 235 FFNAYLASYLLSPRFAHRIVGYLEEEAVHSYTEFLRDLDAGKIDDVPAPAIAIDYWRLPA 294

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 295 DATLRDVVMVVRADE 309


>gi|50251730|dbj|BAD27650.1| putative alternative oxidase 1 [Oryza sativa Japonica Group]
          Length = 339

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+AD++I++TKHH P    DK A WTV++L++P  LFFQRR+ C AM+LETV AVP
Sbjct: 115 PWDTYEADVAIDLTKHHNPATLGDKVARWTVKSLRWPVDLFFQRRYGCRAMMLETVAAVP 174

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMV G +LH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+++P+WYERALV AVQG 
Sbjct: 175 GMVAGAVLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVSQPRWYERALVVAVQGA 234

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY  +YL SP+ AHRIVGYLEEEAV+SYTEFL+DL+ G  ++ PAPAIAIDYWRLP 
Sbjct: 235 FFNAYLASYLLSPRFAHRIVGYLEEEAVHSYTEFLRDLDAGKIDDVPAPAIAIDYWRLPA 294

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV+V+RADE
Sbjct: 295 DATLRDVVMVVRADE 309


>gi|242077038|ref|XP_002448455.1| hypothetical protein SORBIDRAFT_06g027430 [Sorghum bicolor]
 gi|241939638|gb|EES12783.1| hypothetical protein SORBIDRAFT_06g027430 [Sorghum bicolor]
          Length = 332

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 162/195 (83%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+ Y +D SI+V KHH P    DK AY  V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 108 PWDAYTSDTSIDVKKHHAPTTLPDKAAYLIVKSLRVPMDLFFQRRHASHALLLETVAAVP 167

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+ +P+W+ERALV A QGV
Sbjct: 168 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFLEVTQPKWWERALVLATQGV 227

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEAV SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 228 FFNAYFVGYLLSPKFAHRVVGYLEEEAVYSYTEYLKDLEAGIIENTPAPAIAIDYWRLPA 287

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 288 DAKLKDVVTVVRADE 302


>gi|255556647|ref|XP_002519357.1| Alternative oxidase, mitochondrial precursor, putative [Ricinus
           communis]
 gi|223541424|gb|EEF42974.1| Alternative oxidase, mitochondrial precursor, putative [Ricinus
           communis]
          Length = 352

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY+++ +I+++KHH P+ + DK AY TV+ L+ PT +FF+RR+ C AM+LETV AVP
Sbjct: 128 PWETYQSNTAIDLSKHHVPKTFLDKVAYRTVKLLRVPTDIFFRRRYGCRAMMLETVAAVP 187

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKF+ SGGWIKALLEEAENERMHLMT +EL +P+WYER LV AVQGV
Sbjct: 188 GMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVQPRWYERLLVLAVQGV 247

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPKLAHRI GYLEEEA++SYTEFLKD++ G  EN PAPAI+IDYWRLP 
Sbjct: 248 FFNAYFVLYLLSPKLAHRITGYLEEEAIHSYTEFLKDIKEGKIENIPAPAISIDYWRLPK 307

Query: 181 DSTLRDVVVVIRADE 195
           D+TL DV+ VIRADE
Sbjct: 308 DATLEDVITVIRADE 322


>gi|162463026|ref|NP_001105663.1| alternative oxidase AOX3 precursor [Zea mays]
 gi|25989201|gb|AAL27797.1| alternative oxidase AOX3 precursor [Zea mays]
          Length = 332

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 162/195 (83%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+ Y +D SI++ KHH P    DK AY  V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 108 PWDAYTSDTSIDIGKHHAPTTLPDKAAYLIVKSLRVPMDLFFQRRHASHALLLETVAAVP 167

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+ +P+W+ERALV   QGV
Sbjct: 168 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFLEVTQPRWWERALVLTAQGV 227

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK AHR+VGYLEEEAV+SYTE+LKDLE G  +N PAPAIAIDYWRLP 
Sbjct: 228 FFNAYFLGYLLSPKFAHRVVGYLEEEAVHSYTEYLKDLEAGIIDNTPAPAIAIDYWRLPA 287

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 288 DAKLKDVVTVVRADE 302


>gi|51860701|gb|AAU11470.1| mitochondrial alternative oxidase 1d [Saccharum officinarum]
          Length = 286

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 140/195 (71%), Positives = 164/195 (84%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+ Y +D SI+V KHH P    DK AY  V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 62  PWDAYTSDTSIDVKKHHAPTTLPDKAAYLIVKSLRVPMDLFFQRRHASHALLLETVAAVP 121

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGW++ALLEEAENERMHLMTF+E+ +P+W+ERALV A QGV
Sbjct: 122 GMVGGMLLHLRSLRRFEHSGGWVRALLEEAENERMHLMTFLEVTQPRWWERALVLATQGV 181

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEAV+SYTE+LKDLE G  EN+PAPAIAIDYWRLP 
Sbjct: 182 FFNAYFVGYLLSPKFAHRVVGYLEEEAVHSYTEYLKDLEAGIIENSPAPAIAIDYWRLPA 241

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 242 DAKLKDVVTVVRADE 256


>gi|414585625|tpg|DAA36196.1| TPA: hypothetical protein ZEAMMB73_161603 [Zea mays]
          Length = 332

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 162/195 (83%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+ Y +D SI++ KHH P    DK AY  V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 108 PWDAYTSDTSIDIGKHHAPTTLPDKAAYLIVKSLRVPMDLFFQRRHASHALLLETVAAVP 167

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+ +P+W+ERALV   QGV
Sbjct: 168 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFLEVTQPRWWERALVLTAQGV 227

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEAV+SYTE+LKDLE G  +N PAPAIAIDYWRLP 
Sbjct: 228 FFNAYFVGYLLSPKFAHRVVGYLEEEAVHSYTEYLKDLEAGIIDNTPAPAIAIDYWRLPA 287

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 288 DAKLKDVVTVVRADE 302


>gi|225427478|ref|XP_002262811.1| PREDICTED: alternative oxidase 1a, mitochondrial [Vitis vinifera]
 gi|296088484|emb|CBI37475.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 169/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P E YKAD+SI++ KHH P  + +K AYW V+ L+ PT +FF+RR    AM+LETV AVP
Sbjct: 96  PSEAYKADVSIDLGKHHVPRVWTEKVAYWGVKMLRLPTDIFFKRRFEMRAMMLETVAAVP 155

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWI+ LLEEAENERMHLMTF+E+A+P+WYERALVFAVQG+
Sbjct: 156 GMVGGMLLHCKSLRRFEHSGGWIRVLLEEAENERMHLMTFMEVAKPRWYERALVFAVQGI 215

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F+N YF+AY+ SPK+AHR VGYLEEEA++SY EF+K+L++G+  N PAPAIAIDYWRL P
Sbjct: 216 FWNFYFVAYVISPKVAHRAVGYLEEEAIHSYNEFIKELDSGNIPNVPAPAIAIDYWRLAP 275

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V+RADE
Sbjct: 276 DSTLRDVVMVVRADE 290


>gi|414585624|tpg|DAA36195.1| TPA: alternative oxidase [Zea mays]
          Length = 332

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 162/195 (83%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+ Y +D SI++ KHH P    DK AY  V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 108 PWDAYTSDTSIDIGKHHAPTTLPDKAAYLIVKSLRVPMDLFFQRRHASHALLLETVAAVP 167

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+ +P+W+ERALV   QGV
Sbjct: 168 GMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFLEVTQPRWWERALVLTAQGV 227

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR+VGYLEEEAV+SYTE+LKDLE G  +N PAPAIAIDYWRLP 
Sbjct: 228 FFNAYFVGYLLSPKFAHRVVGYLEEEAVHSYTEYLKDLEAGIIDNTPAPAIAIDYWRLPA 287

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV V+RADE
Sbjct: 288 DAKLKDVVTVVRADE 302


>gi|208436660|gb|ACI28876.1| mitochondrial alternative oxidase 1a, partial [Vitis vinifera]
          Length = 297

 Score =  299 bits (766), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 167/195 (85%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P E YKAD+SI++ KHH P  + +K AYW V+ L+ PT +FF+RR    AM+LETV AVP
Sbjct: 96  PSEAYKADVSIDLGKHHVPRVWTEKVAYWGVKMLRLPTDIFFKRRFEMRAMMLETVAAVP 155

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLR+FEHSGGWI+ LLEEAENERMHLMTF+E+A+P+WYERALVFAVQG+
Sbjct: 156 GMVGGMLLHCKSLRRFEHSGGWIRVLLEEAENERMHLMTFMEVAKPRWYERALVFAVQGI 215

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F+N YF+AY+ SPK+AHR VGYLEEEA++S  EF+K+L++G+  N PAPAIAIDYWRL P
Sbjct: 216 FWNFYFVAYVISPKVAHRAVGYLEEEAIHSCNEFIKELDSGNIPNVPAPAIAIDYWRLAP 275

Query: 181 DSTLRDVVVVIRADE 195
           DSTLRDVV+V RADE
Sbjct: 276 DSTLRDVVMVARADE 290


>gi|326521476|dbj|BAK00314.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 330

 Score =  299 bits (765), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 161/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ D SI V KHH+P    DK AY+ V++L+ P  LFFQRRH  HA+LLETV AVP
Sbjct: 106 PWDTYRPDTSIGVAKHHEPRALPDKVAYFVVRSLRVPRDLFFQRRHASHALLLETVAAVP 165

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
            MVGG+LLH +SLR+FEHSGGWI+AL+EEAENERMHLMTF+E+ +P+W+ERALV A QGV
Sbjct: 166 PMVGGVLLHLRSLRRFEHSGGWIRALMEEAENERMHLMTFMEVTQPRWWERALVLAAQGV 225

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR VGYLEEEAV SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 226 FFNAYFVGYLISPKFAHRFVGYLEEEAVESYTEYLKDLEAGLIENTPAPAIAIDYWRLPA 285

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV  +RADE
Sbjct: 286 DARLKDVVTAVRADE 300


>gi|168044781|ref|XP_001774858.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673752|gb|EDQ60270.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 289

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 137/195 (70%), Positives = 168/195 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P ETY  D++I++ K H  + Y D  AYW V++L+ P+ +FF++R+   AM+LETV AVP
Sbjct: 65  PHETYYPDVTIDLEKTHARKTYTDSIAYWLVKSLRVPSDMFFKKRYDVRAMMLETVAAVP 124

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLRKF++SGGWIKALLEEAENERMHLMTF+E+A+P+W+ERALVFAVQGV
Sbjct: 125 GMVGGMLLHCKSLRKFQNSGGWIKALLEEAENERMHLMTFMEVAQPKWWERALVFAVQGV 184

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPK+AHRI GYLEEEAV SYT+FLK ++ G F+N PAP+IAIDYWRLP 
Sbjct: 185 FFNAYFLLYLVSPKIAHRITGYLEEEAVYSYTQFLKMIDEGHFQNGPAPSIAIDYWRLPK 244

Query: 181 DSTLRDVVVVIRADE 195
           D+T+RDVV+V+RADE
Sbjct: 245 DATIRDVVMVVRADE 259


>gi|302760025|ref|XP_002963435.1| hypothetical protein SELMODRAFT_80767 [Selaginella moellendorffii]
 gi|300168703|gb|EFJ35306.1| hypothetical protein SELMODRAFT_80767 [Selaginella moellendorffii]
          Length = 320

 Score =  295 bits (755), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 136/195 (69%), Positives = 165/195 (84%), Gaps = 2/195 (1%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P + Y  D+SI++ KHH P ++ DKFAYWT  + K    LF QRR+ C AM+LETV AVP
Sbjct: 98  PTDAYTPDVSIDLKKHHTPLSFVDKFAYWT--SYKLGLVLFLQRRYGCRAMMLETVAAVP 155

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+SLR+FEHSGGWIKALLEEAENERMHLMTF+E+ +P+WYERALVFAVQGV
Sbjct: 156 GMVGGMLLHCRSLRRFEHSGGWIKALLEEAENERMHLMTFMEVVQPKWYERALVFAVQGV 215

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY + Y+A P+LAHRIVGYLEEEA++SYTE++K+++ G+  N PAPAIAIDYWRLP 
Sbjct: 216 FFNAYMVCYIAFPRLAHRIVGYLEEEAIHSYTEYIKEIDKGNIPNTPAPAIAIDYWRLPK 275

Query: 181 DSTLRDVVVVIRADE 195
           D+ +RDVV V+RADE
Sbjct: 276 DAKIRDVVQVVRADE 290


>gi|302800473|ref|XP_002981994.1| hypothetical protein SELMODRAFT_421378 [Selaginella moellendorffii]
 gi|300150436|gb|EFJ17087.1| hypothetical protein SELMODRAFT_421378 [Selaginella moellendorffii]
          Length = 335

 Score =  295 bits (754), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 160/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P ++Y +D SI+V KHH P+   DK A  TV+ L+  + LFFQ RH CHA+LLETV AVP
Sbjct: 111 PSDSYVSDTSIDVKKHHIPDAVVDKVALKTVKFLRALSDLFFQERHGCHAVLLETVAAVP 170

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF+E+ +P+WYERALV AVQGV
Sbjct: 171 GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFMEVFQPKWYERALVLAVQGV 230

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN YF  YL  P+LAHR VGYLEEEAV SYTEFL  L+ GS  N PAPAIAIDYWRLP 
Sbjct: 231 FFNGYFALYLIFPRLAHRFVGYLEEEAVASYTEFLAALDKGSMPNTPAPAIAIDYWRLPS 290

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV V+RADE
Sbjct: 291 DATLRDVVFVVRADE 305


>gi|326519218|dbj|BAJ96608.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 324

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 137/195 (70%), Positives = 160/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY+ D SI+V KHH+P    DK AY  V+ L+  + LFFQRRH  HA+LLETV AVP
Sbjct: 100 PWDTYRPDTSIDVAKHHEPRALPDKVAYLIVRTLRAGSDLFFQRRHASHALLLETVAAVP 159

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
            MVGG+LLH +SLR+FEHSGGWI+AL+EEAENERMHLMTF+E+ +P W+ERALV A QGV
Sbjct: 160 PMVGGVLLHLRSLRRFEHSGGWIRALMEEAENERMHLMTFMEVTQPLWWERALVLATQGV 219

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYF+ YL SPK AHR VGYLEEEAV+SYTE+LKDLE G  EN PAPAIAIDYWRLP 
Sbjct: 220 FFNAYFVGYLVSPKFAHRFVGYLEEEAVHSYTEYLKDLEAGLIENTPAPAIAIDYWRLPA 279

Query: 181 DSTLRDVVVVIRADE 195
           D+ L+DVV  +RADE
Sbjct: 280 DARLKDVVTAVRADE 294


>gi|302808760|ref|XP_002986074.1| hypothetical protein SELMODRAFT_446465 [Selaginella moellendorffii]
 gi|300146222|gb|EFJ12893.1| hypothetical protein SELMODRAFT_446465 [Selaginella moellendorffii]
          Length = 335

 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 142/195 (72%), Positives = 160/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P ++Y +D SI+V KHH P+   DK A  TV+ L+  + LFFQ RH CHA+LLETV AVP
Sbjct: 111 PSDSYVSDTSIDVKKHHIPDAVVDKVALKTVKFLRVLSDLFFQERHGCHAVLLETVAAVP 170

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF+E+ +P+WYERALV AVQGV
Sbjct: 171 GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFMEVFQPKWYERALVLAVQGV 230

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN YF  YL  P+LAHR VGYLEEEAV SYT+FL  L+ GS  N PAPAIAIDYWRLP 
Sbjct: 231 FFNGYFALYLIFPRLAHRFVGYLEEEAVASYTDFLAALDKGSMPNTPAPAIAIDYWRLPS 290

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV V+RADE
Sbjct: 291 DATLRDVVFVVRADE 305


>gi|17154769|emb|CAD12835.1| putative alternative oxidase [Vigna unguiculata]
 gi|70799005|gb|AAZ09195.1| mitochondrial alternative oxidase 2b [Vigna unguiculata]
          Length = 326

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/195 (68%), Positives = 164/195 (84%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW+TY +D+SI+VTKHH P++  DK A+ +V+ L+  + L+F+ R+ CHAM+LET+ AVP
Sbjct: 102 PWDTYHSDVSIDVTKHHTPKSLTDKVAFRSVKFLRVLSDLYFKERYGCHAMMLETIAAVP 161

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT +EL +P+W+ER L+F  QGV
Sbjct: 162 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELVQPKWHERLLIFTAQGV 221

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPK AHR VGYLEEEAV SYT+ L+ +E+G  EN PAPAIAIDYWRLP 
Sbjct: 222 FFNAFFVFYLLSPKAAHRFVGYLEEEAVISYTQHLEAIESGKVENVPAPAIAIDYWRLPK 281

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 282 DATLKDVVTVIRADE 296


>gi|31322552|gb|AAP35170.1| alternative oxidase [Cucumis sativus]
          Length = 214

 Score =  290 bits (742), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 133/184 (72%), Positives = 156/184 (84%)

Query: 12  NVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK 71
           ++ KHH+P+ + DK AY  V+ L+ PT +FFQRR+ C A++LETV AVPGMVGGMLLH K
Sbjct: 1   DLGKHHQPKTFLDKVAYRVVKLLRIPTDIFFQRRYGCRAVMLETVAAVPGMVGGMLLHLK 60

Query: 72  SLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLA 131
           SLRKF+HSGGWIKALLEEAENERMHLMT IEL +P+WYER LV  VQGVFFNA+F+ YL 
Sbjct: 61  SLRKFQHSGGWIKALLEEAENERMHLMTMIELVQPKWYERLLVITVQGVFFNAFFVLYLM 120

Query: 132 SPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           SPKLAHRIVGYLEEEA++SYTE+LKD+  G  EN PAPAIAIDYWRLP D+ L+DV+ VI
Sbjct: 121 SPKLAHRIVGYLEEEAIHSYTEYLKDINEGKIENVPAPAIAIDYWRLPKDARLKDVITVI 180

Query: 192 RADE 195
           RADE
Sbjct: 181 RADE 184


>gi|351728013|ref|NP_001238460.1| alternative oxidase 3, mitochondrial [Glycine max]
 gi|3023305|sp|O03376.1|AOX3_SOYBN RecName: Full=Alternative oxidase 3, mitochondrial; Flags:
           Precursor
 gi|1946338|gb|AAB97286.1| alternative oxidase 2b [Glycine max]
          Length = 326

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 132/195 (67%), Positives = 161/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++Y +D+SI+VTKHH P++  DK A+  V+ L+  + ++F+ R+ CHAM+LET+ AVP
Sbjct: 102 PWDSYHSDVSIDVTKHHTPKSLTDKVAFRAVKFLRVLSDIYFKERYGCHAMMLETIAAVP 161

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT +EL +P W+ER L+F  QGV
Sbjct: 162 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELVKPSWHERLLIFTAQGV 221

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPK AHR VGYLEEEAV SYT+ L  +E+G  EN PAPAIAIDYWRLP 
Sbjct: 222 FFNAFFVFYLLSPKAAHRFVGYLEEEAVISYTQHLNAIESGKVENVPAPAIAIDYWRLPK 281

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 282 DATLKDVVTVIRADE 296


>gi|32130598|gb|AAP68983.1| alternative oxidase 2b [Glycine max]
          Length = 326

 Score =  289 bits (739), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 132/195 (67%), Positives = 161/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++Y +D+SI+VTKHH P++  DK A+  V+ L+  + ++F+ R+ CHAM+LET+ AVP
Sbjct: 102 PWDSYHSDVSIDVTKHHTPKSLTDKVAFRAVKFLRVLSDIYFKERYGCHAMMLETIAAVP 161

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT +EL +P W+ER L+F  QGV
Sbjct: 162 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELVKPSWHERLLIFTAQGV 221

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ YL SPK AHR VGYLEEEAV SYT+ L  +E+G  EN PAPAIAIDYWRLP 
Sbjct: 222 FFNAFFVFYLLSPKAAHRFVGYLEEEAVISYTQHLNAIESGKVENVPAPAIAIDYWRLPK 281

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 282 DATLKDVVTVIRADE 296


>gi|357490753|ref|XP_003615664.1| Alternative oxidase [Medicago truncatula]
 gi|355516999|gb|AES98622.1| Alternative oxidase [Medicago truncatula]
          Length = 275

 Score =  286 bits (732), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 131/195 (67%), Positives = 161/195 (82%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+Y +D+SI+VTKHH P+ + DKFA+ +V+ L+  + L+F+ R+ CHAM+LET+ AVP
Sbjct: 51  PWESYSSDVSIDVTKHHVPKTFGDKFAFRSVKFLRVLSDLYFKERYGCHAMMLETIAAVP 110

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
            MVGGMLLH KSLRKF+H+GGWIKALLEEAENERMHLMT +EL +P W+ER LV   QGV
Sbjct: 111 PMVGGMLLHLKSLRKFQHTGGWIKALLEEAENERMHLMTMVELVKPSWHERLLVITAQGV 170

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNA+F+ Y+ SPK AHR VGYLEEEAV SYT+ L  +E+G  EN PAPAIAIDYWRLP 
Sbjct: 171 FFNAFFVFYILSPKTAHRFVGYLEEEAVISYTQHLNAIESGKVENVPAPAIAIDYWRLPK 230

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DV+ VIRADE
Sbjct: 231 DATLKDVITVIRADE 245


>gi|12597864|gb|AAG60173.1|AC084110_6 oxidase, putative [Arabidopsis thaliana]
          Length = 287

 Score =  285 bits (728), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 139/195 (71%), Positives = 154/195 (78%), Gaps = 31/195 (15%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++YK D+SI+                               R+HMCHAMLLETV AVP
Sbjct: 94  PWDSYKPDVSID-------------------------------RKHMCHAMLLETVAAVP 122

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLR+FEHSGGWIKALLEEAENERMHLMTFIEL++P+WYERA+VF VQGV
Sbjct: 123 GMVGGMLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFIELSQPKWYERAIVFTVQGV 182

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFLAY+ SPKLAHRI GYLEEEAVNSYTEFLKD++ G FEN+PAPAIAIDYWRLP 
Sbjct: 183 FFNAYFLAYVISPKLAHRITGYLEEEAVNSYTEFLKDIDAGKFENSPAPAIAIDYWRLPK 242

Query: 181 DSTLRDVVVVIRADE 195
           D+TLRDVV VIRADE
Sbjct: 243 DATLRDVVYVIRADE 257


>gi|302776856|ref|XP_002971569.1| hypothetical protein SELMODRAFT_231845 [Selaginella moellendorffii]
 gi|300160701|gb|EFJ27318.1| hypothetical protein SELMODRAFT_231845 [Selaginella moellendorffii]
          Length = 309

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/195 (67%), Positives = 160/195 (82%), Gaps = 13/195 (6%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P + Y  D+SI++ KHH P ++ DKFAYWT             RR+ C AM+LETV AVP
Sbjct: 98  PSDAYTPDVSIDLKKHHTPLSFVDKFAYWT-------------RRYGCRAMMLETVAAVP 144

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLHC+SLR+FEHSGGWIKALLEEAENERMHLMTF+E+ +P+WYERALVFAVQGV
Sbjct: 145 GMVGGMLLHCRSLRRFEHSGGWIKALLEEAENERMHLMTFMEVVQPKWYERALVFAVQGV 204

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAY + Y+A P+LAHRIVGYLEEEA++SYTE++K+++ G+  N PAPAIAIDYWRLP 
Sbjct: 205 FFNAYMVCYIAFPRLAHRIVGYLEEEAIHSYTEYIKEIDKGNIPNTPAPAIAIDYWRLPK 264

Query: 181 DSTLRDVVVVIRADE 195
           D+ +RDVV V+RADE
Sbjct: 265 DAKIRDVVQVVRADE 279


>gi|302797945|ref|XP_002980733.1| hypothetical protein SELMODRAFT_112767 [Selaginella moellendorffii]
 gi|300151739|gb|EFJ18384.1| hypothetical protein SELMODRAFT_112767 [Selaginella moellendorffii]
          Length = 264

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 123/190 (64%), Positives = 155/190 (81%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           +A+ SI+V KH  PEN+ D+FA   V AL+FPT L F++R++C A +LET+  VPGMVGG
Sbjct: 17  EAEGSIDVNKHRNPENFSDQFARLAVMALRFPTDLLFRQRYICRAAMLETISGVPGMVGG 76

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           M+LHCKSLR+ EHSGGWIKAL+EEAENERMHLMTF+EL++P W ERALVF  QG+F NAY
Sbjct: 77  MVLHCKSLRRVEHSGGWIKALMEEAENERMHLMTFMELSKPSWQERALVFTAQGMFMNAY 136

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLR 185
           FL Y+ SP+ AHR+ GY+ EE + SYT+ + D+++G   NAPAP +AIDYWRLP D+TLR
Sbjct: 137 FLLYVVSPRFAHRMAGYIREETIQSYTQLINDIDDGKVPNAPAPDLAIDYWRLPMDATLR 196

Query: 186 DVVVVIRADE 195
           DVV+VIRADE
Sbjct: 197 DVVMVIRADE 206


>gi|302790461|ref|XP_002976998.1| hypothetical protein SELMODRAFT_175925 [Selaginella moellendorffii]
 gi|300155476|gb|EFJ22108.1| hypothetical protein SELMODRAFT_175925 [Selaginella moellendorffii]
          Length = 264

 Score =  276 bits (706), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 153/190 (80%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           +A+ SI+V KH  PEN+ D+FA   V AL+ PT L F++R++C A +LET+  VPGMVGG
Sbjct: 17  EAEASIDVNKHRNPENFSDQFARLAVMALRSPTDLLFRQRYICRAAMLETISGVPGMVGG 76

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           M+LHCKSLR+ EHSGGWIKAL+EEAENERMHLMTF+EL++P W ERALVF  QG+F NAY
Sbjct: 77  MVLHCKSLRRVEHSGGWIKALMEEAENERMHLMTFMELSKPSWQERALVFTAQGMFMNAY 136

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLR 185
           FL Y+ SP+ AHR+ GY+ EE + SYT+ + D+++G   NA AP +AIDYWRLP D+TLR
Sbjct: 137 FLLYVVSPRFAHRMAGYIREETIQSYTQLINDIDDGKVPNASAPDLAIDYWRLPIDATLR 196

Query: 186 DVVVVIRADE 195
           DVV+VIRADE
Sbjct: 197 DVVMVIRADE 206


>gi|147799085|emb|CAN72564.1| hypothetical protein VITISV_018234 [Vitis vinifera]
          Length = 218

 Score =  276 bits (706), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/171 (74%), Positives = 152/171 (88%)

Query: 25  KFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIK 84
           K AYW V+ L+ PT +FF+RR    AM+LETV AVPGMVGGMLLHCKSLR+FEHSGGWI+
Sbjct: 18  KVAYWGVKMLRLPTDIFFKRRFEMRAMMLETVAAVPGMVGGMLLHCKSLRRFEHSGGWIR 77

Query: 85  ALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLE 144
            LLEEAENERMHLMTF+E+A+P+WYERALVFAVQG+F+N YF+AY+ SPK+AHR VGYLE
Sbjct: 78  VLLEEAENERMHLMTFMEVAKPRWYERALVFAVQGIFWNFYFVAYVISPKVAHRAVGYLE 137

Query: 145 EEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           EEA++SY EF+K+L++G+  N PAPAIAIDYWRL PDSTLRDVV+V+RADE
Sbjct: 138 EEAIHSYNEFIKELDSGNIPNVPAPAIAIDYWRLAPDSTLRDVVMVVRADE 188


>gi|357490777|ref|XP_003615676.1| Alternative oxidase [Medicago truncatula]
 gi|355517011|gb|AES98634.1| Alternative oxidase [Medicago truncatula]
          Length = 324

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 132/195 (67%), Positives = 163/195 (83%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE+Y +D+SI+VTKHH P+ + DKFA+ +V+ L+  + L+F+ R+ CHAM+LET+ AVP
Sbjct: 100 PWESYSSDVSIDVTKHHVPKTFGDKFAFRSVKFLRVLSDLYFKERYGCHAMMLETIAAVP 159

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+H+GGWIKALLEEAENERMHLMT +EL +P W+ER LV   QGV
Sbjct: 160 GMVGGMLLHLKSLRKFQHAGGWIKALLEEAENERMHLMTMVELVKPSWHERLLVITAQGV 219

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN +F+ Y+ SPK+AHR VGYLEEEAV SYT++L  +E+G  EN PAPAIAIDYWRLP 
Sbjct: 220 FFNGFFVFYILSPKIAHRFVGYLEEEAVISYTQYLNAIESGKVENVPAPAIAIDYWRLPN 279

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 280 DATLKDVVTVIRADE 294


>gi|388501212|gb|AFK38672.1| unknown [Lotus japonicus]
          Length = 314

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 133/195 (68%), Positives = 157/195 (80%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++Y+AD+SI+VTKHH P+   DK A+  V+ L+  + L+F+ R+ CHAM+LET+ AVP
Sbjct: 90  PWDSYRADVSIDVTKHHLPKTVTDKVAFRAVKFLRVLSDLYFKERYGCHAMMLETIAAVP 149

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT  EL +P W+ER LV   QGV
Sbjct: 150 GMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMTELVKPSWHERLLVITAQGV 209

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFN +F+ YL SPK AHR VGYLEEEAV SYT+ L  +E G  EN PAPAIAIDYWRLP 
Sbjct: 210 FFNFFFVFYLLSPKAAHRFVGYLEEEAVISYTDHLNAIERGEVENVPAPAIAIDYWRLPK 269

Query: 181 DSTLRDVVVVIRADE 195
           D+TL+DVV VIRADE
Sbjct: 270 DATLKDVVTVIRADE 284


>gi|208436654|gb|ACI28873.1| mitochondrial alternative oxidase 1b, partial [Vitis vinifera]
          Length = 142

 Score =  259 bits (661), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 123/138 (89%), Positives = 130/138 (94%)

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
           AVPGMVGGMLLHC+S R+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERA+VFAV
Sbjct: 1   AVPGMVGGMLLHCQSPRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERAIVFAV 60

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWR 177
           QGVFFNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWR
Sbjct: 61  QGVFFNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWR 120

Query: 178 LPPDSTLRDVVVVIRADE 195
           LP +STLRDVV VIRADE
Sbjct: 121 LPAESTLRDVVEVIRADE 138


>gi|294463331|gb|ADE77201.1| unknown [Picea sitchensis]
          Length = 175

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 119/145 (82%), Positives = 135/145 (93%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           M+LETV AVPGMVGGMLLHCKSLRKF+HS GWIKALLEEAENERMHLMTF+E+A+P+WYE
Sbjct: 1   MMLETVAAVPGMVGGMLLHCKSLRKFQHSAGWIKALLEEAENERMHLMTFMEVAQPKWYE 60

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           +ALVF VQGVFFNAYFL Y+ SPKLAHRIVGYLEEEA++SYTEF+K+L+ G+  N PAPA
Sbjct: 61  KALVFTVQGVFFNAYFLMYIFSPKLAHRIVGYLEEEAIHSYTEFIKELDKGTIPNVPAPA 120

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           IAIDYWRLP DSTLRDVV+V+RADE
Sbjct: 121 IAIDYWRLPKDSTLRDVVLVVRADE 145


>gi|225639906|gb|ABZ81228.2| mitochondrial alternative oxidase 1b [Daucus carota]
          Length = 170

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 117/140 (83%), Positives = 133/140 (95%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYFL YL SPKLAHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDY
Sbjct: 61  TVQGVFFNAYFLTYLVSPKLAHRVVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WR+PP+STLRDVV+V+RADE
Sbjct: 121 WRMPPNSTLRDVVMVVRADE 140


>gi|257481048|gb|ACV60633.1| mitochondrial alternative oxidase 1a [Pinus pinea]
 gi|257481052|gb|ACV60635.1| mitochondrial alternative oxidase 1a [Pinus pinea]
 gi|257481056|gb|ACV60637.1| mitochondrial alternative oxidase 1a [Pinus pinea]
 gi|257481058|gb|ACV60638.1| mitochondrial alternative oxidase 1a [Pinus pinea]
          Length = 147

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 118/140 (84%), Positives = 132/140 (94%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYFLAYLASPKLAHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PAPAIAIDY
Sbjct: 61  TVQGVFFNAYFLAYLASPKLAHRVVGYLEEEAIYSYTEFLKELDKGTIENVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP DSTLRDVV+V+RADE
Sbjct: 121 WRLPADSTLRDVVMVVRADE 140


>gi|257481046|gb|ACV60632.1| mitochondrial alternative oxidase 1a [Pinus pinea]
          Length = 147

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 117/140 (83%), Positives = 132/140 (94%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWI+ LL+EAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIRTLLDEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYFLAYLASPKLAHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PAPAIAIDY
Sbjct: 61  TVQGVFFNAYFLAYLASPKLAHRVVGYLEEEAIYSYTEFLKELDKGTIENVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP DSTLRDVV+V+RADE
Sbjct: 121 WRLPADSTLRDVVMVVRADE 140


>gi|257481044|gb|ACV60631.1| mitochondrial alternative oxidase 1a [Pinus pinea]
          Length = 147

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/140 (83%), Positives = 131/140 (93%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYFLAYLASPKLAHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PAPAIAIDY
Sbjct: 61  TVQGVFFNAYFLAYLASPKLAHRVVGYLEEEAIYSYTEFLKELDKGTIENVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP DSTLRDVV+V+RA E
Sbjct: 121 WRLPADSTLRDVVMVVRAGE 140


>gi|125583366|gb|EAZ24297.1| hypothetical protein OsJ_08049 [Oryza sativa Japonica Group]
          Length = 175

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 117/145 (80%), Positives = 133/145 (91%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           M+LETV AVPGMVGGMLLH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E+A+P+WYE
Sbjct: 1   MMLETVAAVPGMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVAKPRWYE 60

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           RALV AVQGVFFNAYFL YL SPKLAHR+VGYLEEEA++SYTE+LKD+E G  EN PAP 
Sbjct: 61  RALVLAVQGVFFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIEAGKIENVPAPP 120

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           IAIDYWRLP  +TL+DVVVV+RADE
Sbjct: 121 IAIDYWRLPAGATLKDVVVVVRADE 145


>gi|170674869|gb|ACB30185.1| mitochondrial alternative oxidase 1a [Hypericum perforatum]
          Length = 147

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 115/140 (82%), Positives = 131/140 (93%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+F HS GWIKALLEEAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFGHSAGWIKALLEEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYFL YL SPKLAHR+VGYLEEEA++SYTEFLK+L+ G+ EN PAPAIAIDY
Sbjct: 61  TVQGVFFNAYFLTYLVSPKLAHRVVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WR+PP+STLRDVV+V+RADE
Sbjct: 121 WRMPPNSTLRDVVMVVRADE 140


>gi|257481054|gb|ACV60636.1| mitochondrial alternative oxidase 1a [Pinus pinea]
          Length = 147

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 117/140 (83%), Positives = 130/140 (92%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYFLAYLASPKLAHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PA AIAIDY
Sbjct: 61  TVQGVFFNAYFLAYLASPKLAHRVVGYLEEEAIYSYTEFLKELDKGTIENVPASAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP DSTLRDVV+V RADE
Sbjct: 121 WRLPADSTLRDVVMVARADE 140


>gi|14599476|gb|AAK70936.1| alternative oxidase 1b [Mangifera indica]
          Length = 144

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 116/143 (81%), Positives = 129/143 (90%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERA 112
           LETV AVPG VGGMLLHCKSLRKFEHSGGWIK L EEAENERMHLMTF+E+A+P+WYERA
Sbjct: 1   LETVAAVPGTVGGMLLHCKSLRKFEHSGGWIKVLTEEAENERMHLMTFMEVAKPRWYERA 60

Query: 113 LVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIA 172
           L+ AVQGVFFN Y L YL SPK AHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PAPAIA
Sbjct: 61  LILAVQGVFFNVYMLGYLISPKFAHRVVGYLEEEAILSYTEFLKELDKGNIENVPAPAIA 120

Query: 173 IDYWRLPPDSTLRDVVVVIRADE 195
           IDYWRLPP+STLRDVV+V+RADE
Sbjct: 121 IDYWRLPPESTLRDVVIVVRADE 143


>gi|257481050|gb|ACV60634.1| mitochondrial alternative oxidase 1a [Pinus pinea]
          Length = 147

 Score =  251 bits (641), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 131/140 (93%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+++P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVSQPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFF+AYFLAYLASPKLAHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PAPA AIDY
Sbjct: 61  TVQGVFFSAYFLAYLASPKLAHRVVGYLEEEAIYSYTEFLKELDKGTIENVPAPANAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP DSTLRDVV+V+RADE
Sbjct: 121 WRLPADSTLRDVVMVVRADE 140


>gi|297599105|ref|NP_001046676.2| Os02g0318100 [Oryza sativa Japonica Group]
 gi|255670840|dbj|BAF08590.2| Os02g0318100 [Oryza sativa Japonica Group]
          Length = 192

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/153 (75%), Positives = 136/153 (88%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           QRR+ C AM+LETV AVPGMV G +LH +SLR+FEHSGGWI+ALLEEAENERMHLMTF+E
Sbjct: 10  QRRYGCRAMMLETVAAVPGMVAGAVLHLRSLRRFEHSGGWIRALLEEAENERMHLMTFME 69

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           +++P+WYERALV AVQG FFNAY  +YL SP+ AHRIVGYLEEEAV+SYTEFL+DL+ G 
Sbjct: 70  VSQPRWYERALVVAVQGAFFNAYLASYLLSPRFAHRIVGYLEEEAVHSYTEFLRDLDAGK 129

Query: 163 FENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            ++ PAPAIAIDYWRLP D+TLRDVV+V+RADE
Sbjct: 130 IDDVPAPAIAIDYWRLPADATLRDVVMVVRADE 162


>gi|208436652|gb|ACI28872.1| mitochondrial alternative oxidase 1b, partial [Vitis vinifera]
          Length = 138

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 119/134 (88%), Positives = 126/134 (94%)

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MVGGM L+C+SLR+FE SGGWIKALLEEAENERMHLMTFIELA+PQWYERALVFAVQGVF
Sbjct: 1   MVGGMFLYCQSLRRFEQSGGWIKALLEEAENERMHLMTFIELAKPQWYERALVFAVQGVF 60

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPD 181
           FNAYFL YLASPK+AHRI GYLEEEAV SYTEFLKDL+NGSFEN PAPAIAIDYWRLP +
Sbjct: 61  FNAYFLTYLASPKVAHRITGYLEEEAVRSYTEFLKDLDNGSFENVPAPAIAIDYWRLPAE 120

Query: 182 STLRDVVVVIRADE 195
           STLRDVV VIRADE
Sbjct: 121 STLRDVVEVIRADE 134


>gi|408797922|gb|AFU92145.1| mitochondrial alternative oxidase 1, partial [Araucaria
           angustifolia]
          Length = 147

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/140 (82%), Positives = 131/140 (93%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLRKF+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRKFQHSGGWIKALLEEAENERMHLMTFMEVAKPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNAYF+ Y+ SPKLAHRIVGYLEEEA +SYTEFLK+L++G+  N PAPAIAIDY
Sbjct: 61  TVQGVFFNAYFILYMISPKLAHRIVGYLEEEATHSYTEFLKELDDGNIPNVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           W+LP DSTLRDVV++I+ADE
Sbjct: 121 WKLPKDSTLRDVVMIIKADE 140


>gi|170674871|gb|ACB30186.1| mitochondrial alternative oxidase 1b [Hypericum perforatum]
          Length = 147

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 113/140 (80%), Positives = 129/140 (92%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+A+P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVAKPKWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQG FFN YFL YL SPK AHR+VGYLEEEA++SYTEFLK+L+NG+ EN PAPAIA+DY
Sbjct: 61  TVQGAFFNIYFLGYLISPKFAHRVVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAVDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLPP+STL+DVV V+RADE
Sbjct: 121 WRLPPNSTLKDVVQVVRADE 140


>gi|297797435|ref|XP_002866602.1| hypothetical protein ARALYDRAFT_496620 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312437|gb|EFH42861.1| hypothetical protein ARALYDRAFT_496620 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 355

 Score =  249 bits (636), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 125/200 (62%), Positives = 150/200 (75%), Gaps = 6/200 (3%)

Query: 1   PWETYKADLSINVTKHHKPENYR---DKFAYWTVQALKFPTHLFFQRRH--MCHAMLLET 55
           PWETY+A+LSI++ KHH P       D  A        FP      ++   M    +LET
Sbjct: 127 PWETYQANLSIDLKKHHVPNRQNRLPDSQAPPYSHRYIFPGMTLALQKTIWMQSNDMLET 186

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLH KS+RKFEHSG WIKALLEEAENERMHLMT +EL +P+WYER LV 
Sbjct: 187 VAAVPGMVGGMLLHLKSIRKFEHSGSWIKALLEEAENERMHLMTMMELVKPKWYERLLVM 246

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQG+ FN++ + Y+ SP+LAHR+VGYLEEEA++SYTEFLKD+++G  EN  APAIAIDY
Sbjct: 247 LVQGI-FNSFLVCYVMSPRLAHRVVGYLEEEAIHSYTEFLKDIDDGKIENVAAPAIAIDY 305

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP D+TL+DVV VIRADE
Sbjct: 306 WRLPKDATLKDVVTVIRADE 325


>gi|2811176|gb|AAB97839.1| alternative oxidase, partial [Zea mays]
          Length = 149

 Score =  248 bits (634), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 115/146 (78%), Positives = 131/146 (89%)

Query: 50  AMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWY 109
           AM+LETV AVPGMVGGMLLH +SLR+FE SGGWI+ALLEEAENERMHLMTF+E+A+P+WY
Sbjct: 1   AMMLETVAAVPGMVGGMLLHLRSLRRFEQSGGWIRALLEEAENERMHLMTFMEVAKPRWY 60

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAP 169
           ERALV  VQGVFFNAYFL YL SPK AHR+VGYLEEEA++SYTE+LKDLE G  E  PAP
Sbjct: 61  ERALVITVQGVFFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYTEYLKDLEAGKIEKRPAP 120

Query: 170 AIAIDYWRLPPDSTLRDVVVVIRADE 195
           AIAIDYWRLP ++TL+DVV V+RADE
Sbjct: 121 AIAIDYWRLPANATLKDVVTVVRADE 146


>gi|37955176|gb|AAP76379.1| alternative oxidase [Capsicum annuum]
          Length = 135

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/134 (85%), Positives = 128/134 (95%)

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MVGGMLLHCKSLR+FE SGGWIKALLEEAENERMHLMTF+E+A+P+WYERALVFAVQGVF
Sbjct: 1   MVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVFAVQGVF 60

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPD 181
           FNAYF+ Y+ SPKLAHRIVGYLEEEA++SYTEFLK+L+NG+ EN PAPAIAIDYWRLP D
Sbjct: 61  FNAYFVTYILSPKLAHRIVGYLEEEAIHSYTEFLKELDNGNIENVPAPAIAIDYWRLPKD 120

Query: 182 STLRDVVVVIRADE 195
           STLRDVV+V+RADE
Sbjct: 121 STLRDVVLVVRADE 134


>gi|190710539|gb|ACE95100.1| mitochondrial alternative oxidase precursor [Citrus sinensis]
          Length = 147

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 111/140 (79%), Positives = 127/140 (90%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT +EL +P+WYER LV 
Sbjct: 1   VAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELVKPKWYERMLVL 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQGVFFNA+F+ YL SPKLAHR+VGYLEEEA++SYTE+LKD+++GS EN PAPAIAIDY
Sbjct: 61  TVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP D+TL+DV+ VIRADE
Sbjct: 121 WRLPKDATLKDVITVIRADE 140


>gi|14599480|gb|AAK70938.1| alternative oxidase 2 [Mangifera indica]
          Length = 144

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 110/143 (76%), Positives = 129/143 (90%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERA 112
           LETV AVPGMVGGMLLH KSLRK E SGGWIKALLEEAENERMHLMT +EL +P+WYER 
Sbjct: 1   LETVAAVPGMVGGMLLHLKSLRKLEQSGGWIKALLEEAENERMHLMTMVELVQPKWYERL 60

Query: 113 LVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIA 172
           LV AVQGVFFN++F+ Y+ SPKLAHRIVGYLEEEA++SYTE+LKD+++G+ +N PAPAIA
Sbjct: 61  LVLAVQGVFFNSFFVLYVLSPKLAHRIVGYLEEEAIHSYTEYLKDIDSGAIKNIPAPAIA 120

Query: 173 IDYWRLPPDSTLRDVVVVIRADE 195
           IDYWRLP D+TL+DV+ V+RADE
Sbjct: 121 IDYWRLPKDATLKDVITVVRADE 143


>gi|433335539|gb|AGB34163.1| mitochondrial alternative oxidase 1b, partial [Olea europaea subsp.
           europaea]
          Length = 143

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 113/139 (81%), Positives = 126/139 (90%)

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMTF+E+ + +W ERALVF 
Sbjct: 1   AAVPGMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMTFMEVTQSRWNERALVFT 60

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQGV FNAYFLAYLASPKLAHR+VGYLEEEA+ SYTEFLK+L+ G+ EN PAPAIAIDYW
Sbjct: 61  VQGVCFNAYFLAYLASPKLAHRVVGYLEEEAIYSYTEFLKELDKGTIENVPAPAIAIDYW 120

Query: 177 RLPPDSTLRDVVVVIRADE 195
            LP DSTLRDVV+V+RADE
Sbjct: 121 CLPADSTLRDVVMVVRADE 139


>gi|190710537|gb|ACE95099.1| mitochondrial alternative oxidase precursor [Citrus sinensis]
          Length = 148

 Score =  242 bits (617), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 111/140 (79%), Positives = 127/140 (90%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
           A QGVFFNAYFL YL SPK AHR+VGYLEE  ++SYTEFLK+L+ G+ EN PAPAIA DY
Sbjct: 61  AXQGVFFNAYFLGYLISPKFAHRMVGYLEEXXIHSYTEFLKELDKGNIENVPAPAIATDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLPP+STL+DVV+V+  +E
Sbjct: 121 WRLPPNSTLKDVVLVVXTNE 140


>gi|257481062|gb|ACV60640.1| mitochondrial alternative oxidase 1b [Pinus pinea]
          Length = 144

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 115/139 (82%), Positives = 129/139 (92%)

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVGGMLLHCKSLRKF+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALVF 
Sbjct: 1   AAVPGMVGGMLLHCKSLRKFQHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVFT 60

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQG+FFNAYFL Y+ SPKLAHR+ GYLEEEA++SYTEFLK+L+ G+  N PAPAIAIDYW
Sbjct: 61  VQGIFFNAYFLMYILSPKLAHRVTGYLEEEAIHSYTEFLKELDKGNIPNVPAPAIAIDYW 120

Query: 177 RLPPDSTLRDVVVVIRADE 195
           RLP DSTLRDVVVV+RADE
Sbjct: 121 RLPKDSTLRDVVVVVRADE 139


>gi|208436650|gb|ACI28871.1| mitochondrial alternative oxidase 1a, partial [Vitis vinifera]
 gi|208436658|gb|ACI28875.1| mitochondrial alternative oxidase 1a, partial [Vitis vinifera]
          Length = 147

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 110/140 (78%), Positives = 130/140 (92%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLHCKSLR+FEHSGGWI+ LLEEAENERMHLMTF+E+A+P+WYERALVF
Sbjct: 1   VAAVPGMVGGMLLHCKSLRRFEHSGGWIRVLLEEAENERMHLMTFMEVAKPRWYERALVF 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
           AVQG+F+N YF+AY+ SPK+AHR VGYLEEEA++SY EF+K+L++G+  N PAPAIAIDY
Sbjct: 61  AVQGIFWNFYFVAYVISPKVAHRAVGYLEEEAIHSYNEFIKELDSGNIPNVPAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRL PDSTLRDVV+V+RADE
Sbjct: 121 WRLAPDSTLRDVVMVVRADE 140


>gi|449016571|dbj|BAM79973.1| mitochondrial alternative oxidase [Cyanidioschyzon merolae strain
           10D]
          Length = 383

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/195 (57%), Positives = 148/195 (75%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P  TYK +L++++ +H +P  + D+FAY+TV+ L+F    FFQRR+   A++LETV AVP
Sbjct: 150 PEHTYKPNLNVDLKRHVQPTGFSDRFAYYTVKFLRFFADAFFQRRYGHRAVVLETVAAVP 209

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGM+LH + LR+F  SGGWI+ LLEEAENERMHLM ++ +A+P+  ERALV   Q  
Sbjct: 210 GMVGGMMLHLQCLRRFRQSGGWIRVLLEEAENERMHLMVYMSIAQPRALERALVILAQAG 269

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FF+ Y L Y  SPK AHR+VGYLEEEA+ SYTE+LKD+++G   N PAP IAIDYW+L P
Sbjct: 270 FFSFYTLLYTISPKTAHRLVGYLEEEAIVSYTEYLKDIDDGRIPNIPAPPIAIDYWQLDP 329

Query: 181 DSTLRDVVVVIRADE 195
           ++ LRDVV+  RADE
Sbjct: 330 NARLRDVVLATRADE 344


>gi|126572031|gb|ABO21612.1| mitochondrial alternative oxidase [Cucurbita pepo]
          Length = 147

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 125/141 (88%)

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           TV AVPGMVGGMLLH KSLR+F+HSGGWIKALLEEAENERMHLMT IEL +P+WYER LV
Sbjct: 1   TVAAVPGMVGGMLLHLKSLRRFQHSGGWIKALLEEAENERMHLMTMIELVQPKWYERMLV 60

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAID 174
             VQGVFFNA+F+ YL SPKLAHR+VGYLEEEA++SYTE+LKD++ G  EN PAPAIAID
Sbjct: 61  ITVQGVFFNAFFVLYLMSPKLAHRVVGYLEEEAIHSYTEYLKDIDEGKIENVPAPAIAID 120

Query: 175 YWRLPPDSTLRDVVVVIRADE 195
           YWRLP D+ L+DV+ VIRADE
Sbjct: 121 YWRLPKDARLKDVITVIRADE 141


>gi|208436642|gb|ACI28867.1| mitochondrial alternative oxidase 1a, partial [Vitis vinifera]
          Length = 143

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 129/139 (92%)

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVGGMLLHCKSLR+FEHSGGWI+ LLEEAENERMHLMTF+E+A+P+WYERALVFA
Sbjct: 1   AAVPGMVGGMLLHCKSLRRFEHSGGWIRVLLEEAENERMHLMTFMEVAKPRWYERALVFA 60

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQG+F+N YF+AY+ SPK+AHR VGYLEEEA++SY EF+K+L++G+  N PAPAIAIDYW
Sbjct: 61  VQGIFWNFYFVAYVISPKVAHRAVGYLEEEAIHSYNEFIKELDSGNIPNVPAPAIAIDYW 120

Query: 177 RLPPDSTLRDVVVVIRADE 195
           RL PDSTLRDVV+V+RADE
Sbjct: 121 RLAPDSTLRDVVMVVRADE 139


>gi|208436640|gb|ACI28866.1| mitochondrial alternative oxidase 2, partial [Vitis vinifera]
          Length = 143

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 108/139 (77%), Positives = 124/139 (89%)

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVGGMLLH +SLRKFE SGGWIKALLEEAENERMHLMT +EL +P+WYER LV  
Sbjct: 1   AAVPGMVGGMLLHLRSLRKFEQSGGWIKALLEEAENERMHLMTMVELVQPKWYERVLVLT 60

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQGVFFNA+F+ YL SPKLAHR+VGYLEEEA++SYTE+LKD+++G  EN PAPAIAIDYW
Sbjct: 61  VQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGKIENVPAPAIAIDYW 120

Query: 177 RLPPDSTLRDVVVVIRADE 195
           RLP D+TL+DV+ VIRADE
Sbjct: 121 RLPKDATLKDVITVIRADE 139


>gi|433335543|gb|AGB34165.1| mitochondrial alternative oxidase 2, partial [Olea europaea subsp.
           europaea]
          Length = 169

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/139 (77%), Positives = 124/139 (89%)

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVGGMLLH +SLRKFE SGGWIKALLEEAENERMHLMT +EL +P+WYER LV  
Sbjct: 1   AAVPGMVGGMLLHLRSLRKFEQSGGWIKALLEEAENERMHLMTMVELVQPKWYERVLVLT 60

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQGVFFNA+F+ YL SPKLAHR+VGYLEEEA++SYTE+LKD+++G  EN PAPAIAIDYW
Sbjct: 61  VQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGKIENVPAPAIAIDYW 120

Query: 177 RLPPDSTLRDVVVVIRADE 195
           RLP D+TL+DV+ VIRADE
Sbjct: 121 RLPKDATLKDVITVIRADE 139


>gi|33087083|gb|AAP92755.1| alternative oxidase 2 [Solanum lycopersicum]
          Length = 173

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/143 (76%), Positives = 124/143 (86%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERA 112
           LETV  VPGMVGGMLLH +SLRKFEHSGGWIKALLEEAENERMHLMT +EL +P+WYER 
Sbjct: 1   LETVAGVPGMVGGMLLHLRSLRKFEHSGGWIKALLEEAENERMHLMTMVELVQPKWYERL 60

Query: 113 LVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIA 172
           LV AVQGVFFN Y + YL SPKLAHR+VGYLEEEA++SYT +L D++ G  EN PAPAIA
Sbjct: 61  LVIAVQGVFFNFYSVLYLLSPKLAHRVVGYLEEEAIHSYTLYLNDIDRGEIENVPAPAIA 120

Query: 173 IDYWRLPPDSTLRDVVVVIRADE 195
           IDYWRLP D+TL+DV+ VIRADE
Sbjct: 121 IDYWRLPKDATLKDVITVIRADE 143


>gi|452823408|gb|EME30419.1| mitochondrial alternative oxidase [Galdieria sulphuraria]
          Length = 364

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/195 (57%), Positives = 146/195 (74%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P  TYK +LSI++ +HH P ++RD+ A   V+ L+F    FFQ+R+   A++LETV AVP
Sbjct: 124 PEHTYKPNLSIDLQRHHTPLDFRDRVALGIVKFLRFFADAFFQKRYGHRAVVLETVAAVP 183

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGML H + LR+F  SGGWI+ LL+EAENERMHL+TF+ +A+P ++ER LV   QG 
Sbjct: 184 GMVGGMLTHFRCLRRFAPSGGWIRVLLDEAENERMHLVTFMSIAKPNYFERLLVLITQGG 243

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FF  Y + Y+ SPK AHRIVGYLEEEA+ SYTE+LK +++G   N PAP IAIDYW+L  
Sbjct: 244 FFAFYTMIYILSPKTAHRIVGYLEEEAIISYTEYLKGIDSGLHANIPAPQIAIDYWQLDS 303

Query: 181 DSTLRDVVVVIRADE 195
           D+ LRDVV+ +RADE
Sbjct: 304 DARLRDVVLAVRADE 318


>gi|257481064|gb|ACV60641.1| mitochondrial alternative oxidase 2 [Pinus pinea]
          Length = 147

 Score =  236 bits (602), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 108/140 (77%), Positives = 126/140 (90%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLH KSLRKF+HSGGWIKALLEEAENERMHLMT +EL +P+W+ER LV 
Sbjct: 1   VAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELVQPKWHERLLVL 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
           AVQGVFFNA+F+ Y+ SPKLAHRIVGYLEEEA++S+TE+LKD++ G  EN PAPAI+IDY
Sbjct: 61  AVQGVFFNAFFVLYILSPKLAHRIVGYLEEEAIHSHTEYLKDIDRGLIENVPAPAISIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP D+ LRDV++VIRADE
Sbjct: 121 WRLPQDAKLRDVILVIRADE 140


>gi|208436646|gb|ACI28869.1| mitochondrial alternative oxidase 1a, partial [Vitis vinifera]
          Length = 143

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 107/136 (78%), Positives = 127/136 (93%)

Query: 60  PGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQG 119
           PGMVGGMLLHCKSLR+FEHSGGWI+ LLEEAENERMHLMTF+E+A+P+WYERALVFAVQG
Sbjct: 1   PGMVGGMLLHCKSLRRFEHSGGWIRVLLEEAENERMHLMTFMEVAKPRWYERALVFAVQG 60

Query: 120 VFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLP 179
           +F+N YF+AY+ SPK+AHR VGYLEEEA++SY EF+K+L++G+  N PAPAIAIDYWRL 
Sbjct: 61  IFWNFYFVAYVISPKVAHRAVGYLEEEAIHSYNEFIKELDSGNIPNVPAPAIAIDYWRLA 120

Query: 180 PDSTLRDVVVVIRADE 195
           PDSTLRDVV+V+RADE
Sbjct: 121 PDSTLRDVVMVVRADE 136


>gi|336451471|ref|ZP_08621909.1| Alternative oxidase [Idiomarina sp. A28L]
 gi|336281842|gb|EGN75114.1| Alternative oxidase [Idiomarina sp. A28L]
          Length = 210

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 108/181 (59%), Positives = 138/181 (76%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KHHKP+   D+ AY TV+ L+F   LFF  R+   A++LETV AVPGMVGG + H  SLR
Sbjct: 10  KHHKPQGISDRIAYGTVRFLRFFADLFFSGRYGNRAVVLETVAAVPGMVGGAIQHLHSLR 69

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + ++  GWI  LLEEAENERMHL+TFIE+A+P W ER LV   QG+F+NA+F+ YL S K
Sbjct: 70  RMKNDDGWIHTLLEEAENERMHLLTFIEVAKPNWLERTLVIIAQGIFYNAFFVLYLFSSK 129

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
            AHR+VGYLEEEAV SYTE+L  +++G +EN PAP IAIDYW+LP D+ LR+V++ +RAD
Sbjct: 130 TAHRVVGYLEEEAVYSYTEYLAGVDSGKYENVPAPQIAIDYWQLPEDARLREVIIAVRAD 189

Query: 195 E 195
           E
Sbjct: 190 E 190


>gi|257481060|gb|ACV60639.1| mitochondrial alternative oxidase 1b [Pinus pinea]
          Length = 144

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 112/139 (80%), Positives = 126/139 (90%)

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVG +LLHCKSLRKF+HSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALV  
Sbjct: 1   AAVPGMVGAILLHCKSLRKFQHSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVST 60

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQG+FFNAYFL Y+ SPKLAHRI GYLEEEA+ SYTEFLK+L+ G+  N PAPAIAIDYW
Sbjct: 61  VQGIFFNAYFLMYILSPKLAHRITGYLEEEAIYSYTEFLKELDKGNIPNVPAPAIAIDYW 120

Query: 177 RLPPDSTLRDVVVVIRADE 195
           RLP D+TLRDVVVV+RADE
Sbjct: 121 RLPKDATLRDVVVVVRADE 139


>gi|125583367|gb|EAZ24298.1| hypothetical protein OsJ_08050 [Oryza sativa Japonica Group]
          Length = 325

 Score =  232 bits (591), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 120/195 (61%), Positives = 141/195 (72%), Gaps = 16/195 (8%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETY  D +I++ KHH+P+   DK AYWTV+AL+ PT +FF           E V  VP
Sbjct: 117 PWETYSPDTTIDLKKHHEPKVLLDKVAYWTVKALRVPTDIFFP----------EEV-RVP 165

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
               G                WI+ALLEEAENERMHLMTF+E+A+P+WYERALV AVQGV
Sbjct: 166 RDDAGDGGRGCRGCGG-----WIRALLEEAENERMHLMTFMEVAKPRWYERALVLAVQGV 220

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FFNAYFL YL SPKLAHR+VGYLEEEA++SYTE+LKD+E G  EN PAP IAIDYWRLP 
Sbjct: 221 FFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIEAGKIENVPAPPIAIDYWRLPA 280

Query: 181 DSTLRDVVVVIRADE 195
            +TL+DVVVV+RADE
Sbjct: 281 GATLKDVVVVVRADE 295


>gi|452821862|gb|EME28887.1| mitochondrial alternative oxidase [Galdieria sulphuraria]
          Length = 355

 Score =  232 bits (591), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 110/195 (56%), Positives = 145/195 (74%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P  TYK +L +++T+HH P ++RDK A   V+ L+     FF++R+   A++LETV AVP
Sbjct: 115 PEHTYKPNLKVDLTRHHDPIDFRDKVAQKVVKFLRVFADAFFRKRYGHRAVVLETVAAVP 174

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGML H +SLR+F+ SGGWI+ LLEEAENERMHLMTF+ +A+P   ERALV   QG 
Sbjct: 175 GMVGGMLQHLQSLRRFKPSGGWIRVLLEEAENERMHLMTFMAIAKPTILERALVLLTQGG 234

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           FF  Y   Y+ SPK AHRIVGYLEEEA+ SYT++L++++ G+  N PAP IAIDYW++  
Sbjct: 235 FFAFYAFIYILSPKTAHRIVGYLEEEAIISYTQYLQEIDKGTHANIPAPEIAIDYWQMDK 294

Query: 181 DSTLRDVVVVIRADE 195
            + LRDVV+ +RADE
Sbjct: 295 GARLRDVVLAVRADE 309


>gi|170674867|gb|ACB30184.1| mitochondrial alternative oxidase 2 [Hypericum perforatum]
          Length = 147

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 104/140 (74%), Positives = 121/140 (86%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V AVPGMVGGMLLH +SLRKFE +GGW+KALLEEAENERMHLMT +EL +P+WYER LV 
Sbjct: 1   VAAVPGMVGGMLLHLRSLRKFEQTGGWVKALLEEAENERMHLMTMVELVQPKWYERMLVL 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDY 175
            VQG+FFNAYF+ YL SPKLAHR+ GYLEEEA++SYTE+LKD+ +G  EN  APAIAIDY
Sbjct: 61  IVQGLFFNAYFVIYLVSPKLAHRVTGYLEEEAIHSYTEYLKDIRSGKIENVKAPAIAIDY 120

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRLP ++TL DV+ VIRADE
Sbjct: 121 WRLPKEATLEDVITVIRADE 140


>gi|389730180|ref|ZP_10189355.1| alternative oxidase [Rhodanobacter sp. 115]
 gi|388440952|gb|EIL97272.1| alternative oxidase [Rhodanobacter sp. 115]
          Length = 232

 Score =  226 bits (576), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/195 (52%), Positives = 140/195 (71%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P  + + +  I++T+HH+P   RD+ A+  V+ L+F    FF +R+   A++LETV AVP
Sbjct: 10  PKRSPQPEEQISLTRHHEPRGARDRIAFGFVKFLRFIADTFFAKRYGHRAVVLETVAAVP 69

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVG  L H + LR+     GWI  LL+EAENERMHLMTF+ + RP W+ER +V  VQG+
Sbjct: 70  GMVGATLQHLRCLRRMRDDDGWIYTLLDEAENERMHLMTFMAIIRPTWFERVVVVIVQGI 129

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F+NA+FL YL SP+ AHR+VGY EEEAV SY  +L  +++G+ EN PAP +AIDYW LP 
Sbjct: 130 FYNAFFLLYLCSPRTAHRVVGYFEEEAVISYNHYLAQIDSGADENVPAPHVAIDYWSLPA 189

Query: 181 DSTLRDVVVVIRADE 195
           D+ LRDV+V+IRA+E
Sbjct: 190 DARLRDVIVIIRAEE 204


>gi|357490779|ref|XP_003615677.1| Alternative oxidase [Medicago truncatula]
 gi|355517012|gb|AES98635.1| Alternative oxidase [Medicago truncatula]
          Length = 231

 Score =  226 bits (575), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 111/151 (73%), Positives = 129/151 (85%)

Query: 45  RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA 104
           R+ CHAM+LET+ AVPGMVGGMLLH KSLRKF+H+GGWIKALLEEAENERMHLMT +EL 
Sbjct: 51  RYGCHAMMLETIAAVPGMVGGMLLHLKSLRKFQHAGGWIKALLEEAENERMHLMTMVELV 110

Query: 105 RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE 164
           +P W+ER LV   QGVFFN +F+ Y+ SPK+AHR VGYLEEEAV SYT++L  +E+G  E
Sbjct: 111 KPSWHERLLVITAQGVFFNGFFVFYILSPKIAHRFVGYLEEEAVISYTQYLNAIESGKVE 170

Query: 165 NAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           N PAPAIAIDYWRLP D+TL+DVV VIRADE
Sbjct: 171 NVPAPAIAIDYWRLPNDATLKDVVTVIRADE 201


>gi|170674873|gb|ACB30187.1| mitochondrial alternative oxidase 1c, partial [Hypericum
           perforatum]
          Length = 154

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 113/121 (93%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWETYKAD SI+VTKHHK   +  KFAYWTVQ+LKFPT+LFFQRRHMCHAMLLETV AVP
Sbjct: 33  PWETYKADTSIDVTKHHKATTFMGKFAYWTVQSLKFPTYLFFQRRHMCHAMLLETVAAVP 92

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH KS+R+FEHSGGWIKALLEEAENERMHLMTF+EL++P+WYERALVFAVQGV
Sbjct: 93  GMVGGMLLHLKSIRRFEHSGGWIKALLEEAENERMHLMTFLELSQPKWYERALVFAVQGV 152

Query: 121 F 121
           F
Sbjct: 153 F 153


>gi|254490126|ref|ZP_05103317.1| Alternative oxidase superfamily [Methylophaga thiooxidans DMS010]
 gi|224464612|gb|EEF80870.1| Alternative oxidase superfamily [Methylophaga thiooxydans DMS010]
          Length = 207

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 133/180 (73%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HH+P  + D+ A   V+ ++F    FF  R+   A++LETV AVPGMVGG L H +SLR+
Sbjct: 10  HHQPSCFSDRLALRIVKFMRFFADAFFSGRYGHRAVILETVAAVPGMVGGALQHLRSLRR 69

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHL+TFI +A+P  +ER LV   QGVF+N +FL YL S ++
Sbjct: 70  MKDDDGWIETLLDEAENERMHLLTFIHIAKPNMFERLLVIITQGVFYNLFFLLYLCSSRV 129

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHRIVGYLEEEAV SYTE+L  ++NG +EN PAP IAIDYW+LP D+ LRDV++ +R DE
Sbjct: 130 AHRIVGYLEEEAVYSYTEYLNGVDNGQYENVPAPQIAIDYWQLPADARLRDVLLKVRDDE 189


>gi|77362686|dbj|BAE46391.1| alternative oxidase [Phaseolus vulgaris]
          Length = 151

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 102/145 (70%), Positives = 117/145 (80%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           M+LETV AVPGMVGGMLLH  SL KF+HSGGWIKAL+EEAENERMHLMT +EL  P+W E
Sbjct: 1   MMLETVAAVPGMVGGMLLHLXSLXKFQHSGGWIKALMEEAENERMHLMTMVELVXPKWXE 60

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           R LV A QGVFFN +F  Y+ SP  AHRIVGY EEEA+ SYT++LK +E G+ EN PAPA
Sbjct: 61  RLLVLAXQGVFFNXFFALYILSPXAAHRIVGYXEEEAIXSYTQYLKXIERGAXENVPAPA 120

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           IAIDYWRLP D+  + V+ VIRADE
Sbjct: 121 IAIDYWRLPKDAXXKXVITVIRADE 145


>gi|254436730|ref|ZP_05050224.1| Alternative oxidase superfamily [Octadecabacter antarcticus 307]
 gi|198252176|gb|EDY76490.1| Alternative oxidase superfamily [Octadecabacter antarcticus 307]
          Length = 217

 Score =  218 bits (556), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 103/192 (53%), Positives = 139/192 (72%)

Query: 4   TYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMV 63
            Y A+L      HH+P+++RD+FA   V+ ++     FF  R+   A++LETV AVPGMV
Sbjct: 6   AYAAELDDKNLHHHEPQDFRDRFALRLVKFMRVFADKFFAHRYGHRAVVLETVAAVPGMV 65

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFN 123
           GG+L H K+LR+     GWI+ L+EEA+NERMHLMTFIE+A+P  +ER L+ A Q VF+N
Sbjct: 66  GGLLQHLKALRQIRDDQGWIRELIEEADNERMHLMTFIEIAQPSRFERFLIAATQLVFYN 125

Query: 124 AYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDST 183
            YF  YL +P++AHR+VGYLEEEAV SYT++L  ++ G+ EN PAP IA DYW+LP  + 
Sbjct: 126 LYFFLYLLAPRVAHRVVGYLEEEAVVSYTQYLAQIDAGAVENVPAPQIAKDYWKLPDGAR 185

Query: 184 LRDVVVVIRADE 195
           LR+VV+VIR DE
Sbjct: 186 LREVVLVIREDE 197


>gi|85710461|ref|ZP_01041525.1| putative oxidase [Erythrobacter sp. NAP1]
 gi|85687639|gb|EAQ27644.1| putative oxidase [Erythrobacter sp. NAP1]
          Length = 232

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 102/184 (55%), Positives = 135/184 (73%)

Query: 12  NVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK 71
           +VT H  P++  D  A+  V+ L+F    FF RR+   A++LETV AVPGMVGG+L H +
Sbjct: 18  DVTSHVAPQSKSDHVAFAFVKLLRFFADTFFARRYGHRAVVLETVAAVPGMVGGLLQHLR 77

Query: 72  SLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLA 131
           +LR+     GWI+ LL+EAENERMHLMTFIE+A+P  +ER L+ +VQ VF+N YF  YL 
Sbjct: 78  ALRRMRDDEGWIRTLLDEAENERMHLMTFIEIAKPNAFERFLILSVQLVFYNFYFFLYLL 137

Query: 132 SPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           +P+ AHR+VGY EEEAV SYT +LK++E+G  EN PAP IAIDYW+L  D+ L DV++ +
Sbjct: 138 APRTAHRVVGYFEEEAVISYTAYLKEVESGRHENVPAPQIAIDYWQLHSDARLSDVIIAV 197

Query: 192 RADE 195
           RADE
Sbjct: 198 RADE 201


>gi|399545055|ref|YP_006558363.1| alternative oxidase [Marinobacter sp. BSs20148]
 gi|399160387|gb|AFP30950.1| Alternative oxidase [Marinobacter sp. BSs20148]
          Length = 215

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 134/183 (73%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           ++KHH P  + D+ A+   + L+F   LFF +R+   A++LETV AVPGMVGGM+ H +S
Sbjct: 17  LSKHHTPSGFSDRVAFRLTRLLRFFADLFFAKRYGHRAVVLETVAAVPGMVGGMVGHMRS 76

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR+ E +  WI  LLEEAENERMHLMTF+++A+P + ER L+   QG+FF ++   Y+ S
Sbjct: 77  LRRMEDNREWIHTLLEEAENERMHLMTFVQIAQPSFLERVLILLAQGIFFTSFLFLYIVS 136

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIR 192
            + AHR+VGY EEEAV SY E+L ++++G  EN  AP IAIDYW+LP D+TLRDV++V+R
Sbjct: 137 GRTAHRLVGYFEEEAVYSYGEYLAEVDSGRLENVAAPQIAIDYWKLPADATLRDVIIVVR 196

Query: 193 ADE 195
            DE
Sbjct: 197 LDE 199


>gi|387130678|ref|YP_006293568.1| oxidase [Methylophaga sp. JAM7]
 gi|386271967|gb|AFJ02881.1| putative oxidase [Methylophaga sp. JAM7]
          Length = 206

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/181 (54%), Positives = 134/181 (74%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
            H++P+   D+ A   V+ ++F    FF  R+   A++LETV AVPGMVGG L H +SLR
Sbjct: 9   SHYQPQCLSDRIALRVVKFMRFFADAFFSGRYGHRAVVLETVAAVPGMVGGALQHLRSLR 68

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + +   GWI+ LL+EAENERMHLMTFI +A+P W ER ++   QGVF+N +FL YL S K
Sbjct: 69  RMQDDEGWIRTLLDEAENERMHLMTFIHIAKPSWLERLIIIIAQGVFYNLFFLLYLFSSK 128

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
           +AHRIVGYLEEEAV SYTE+L  +++G+++N PAP IAIDYW+LP ++ LRDV++ +R D
Sbjct: 129 VAHRIVGYLEEEAVYSYTEYLNGVDDGTYDNIPAPQIAIDYWQLPDNARLRDVILKVRDD 188

Query: 195 E 195
           E
Sbjct: 189 E 189


>gi|254452548|ref|ZP_05065985.1| alternative oxidase [Octadecabacter arcticus 238]
 gi|198266954|gb|EDY91224.1| alternative oxidase [Octadecabacter arcticus 238]
          Length = 217

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/191 (54%), Positives = 139/191 (72%)

Query: 5   YKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVG 64
           Y+A+L+     HH P+++RD+FA   V+ L+     FF  R+   A++LETV AVPGMVG
Sbjct: 7   YEAELASENMHHHVPQDFRDRFALRLVKFLRVFADKFFAGRYSHRAVVLETVAAVPGMVG 66

Query: 65  GMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNA 124
           G+L H K+LR      GWI+ L+EEA+NERMHLMTFIE+A+P  +ER LV A Q +F+N 
Sbjct: 67  GLLQHLKALRHIRDDQGWIRELIEEADNERMHLMTFIEIAQPSKFERFLVAATQLIFYNF 126

Query: 125 YFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTL 184
           YF  YL +P++AHR+VGYLEEEAV SYT++L+ ++ G  EN  AP IAIDYW+L  ++ L
Sbjct: 127 YFFLYLLAPRVAHRVVGYLEEEAVVSYTQYLEQIDAGLIENIAAPQIAIDYWKLSANARL 186

Query: 185 RDVVVVIRADE 195
           RDVV+VIR DE
Sbjct: 187 RDVVLVIREDE 197


>gi|329902679|ref|ZP_08273233.1| putative oxidase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548651|gb|EGF33301.1| putative oxidase [Oxalobacteraceae bacterium IMCC9480]
          Length = 204

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 128/180 (71%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HH P +  D+FA    + L+F   +FF +R+   A++LETV AVPGMVGG+L H KSLR 
Sbjct: 10  HHDPRDLSDRFALGFTKFLRFLADVFFAKRYGHRAVVLETVAAVPGMVGGLLQHLKSLRL 69

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GW+  LL+EAENERMHLMTFI++A+P  +ER ++F  Q VF+N YF  YL S K 
Sbjct: 70  IKDDNGWVHTLLDEAENERMHLMTFIQIAQPSGFERLVIFVTQLVFYNLYFFIYLFSAKT 129

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHRIVGY EEEA  SYTE+L  ++NG  EN  APAIAI YW L PD+ LRDVV+ +RADE
Sbjct: 130 AHRIVGYFEEEAYYSYTEYLAGIDNGEHENIAAPAIAIKYWNLHPDARLRDVVIAVRADE 189


>gi|339502929|ref|YP_004690349.1| alternative oxidase-like protein [Roseobacter litoralis Och 149]
 gi|338756922|gb|AEI93386.1| alternative oxidase-like protein [Roseobacter litoralis Och 149]
          Length = 213

 Score =  215 bits (547), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 134/180 (74%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P++ RD+FA   V+ ++     FF +R+   A++LETV AVPGMVGGML H K+LR+
Sbjct: 16  HTPPKDVRDRFALRLVKFMRVFADKFFAKRYGHRAVVLETVAAVPGMVGGMLQHLKALRR 75

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
                GW++ LL+EAENERMHLMTFI++A P   ER L+ A QGVFFN YF+ YL +P+ 
Sbjct: 76  LRDDEGWVRELLDEAENERMHLMTFIKVAEPSRLERYLIIAGQGVFFNLYFVLYLFAPRT 135

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+V YLEEEAV SYT++L++++ G  +N  AP IAIDYW+LPPD+ LR+V++ +RADE
Sbjct: 136 AHRVVAYLEEEAVISYTQYLEEVDAGRVQNIAAPQIAIDYWKLPPDARLREVIIAVRADE 195


>gi|149200905|ref|ZP_01877880.1| putative oxidase [Roseovarius sp. TM1035]
 gi|149145238|gb|EDM33264.1| putative oxidase [Roseovarius sp. TM1035]
          Length = 217

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/195 (50%), Positives = 134/195 (68%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           P   ++ D +  +  HH P +  D+ A   V+ ++     FF +R+   A++LETV AVP
Sbjct: 3   PERQFETDETATLEVHHSPRDIHDRIALRIVKIMRVFADAFFSKRYGHRAVVLETVAAVP 62

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGG+L H KSLR      GWI+ LL+EAENERMHLMTF+++A+P   ER L+   Q +
Sbjct: 63  GMVGGLLQHLKSLRHIREDQGWIRELLDEAENERMHLMTFVQIAQPSRGERWLIMIAQAI 122

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPP 180
           F+N +F  YL +P+ AHRIVGYLEEEAV SYT++L +++ G  +N PAP IAIDYW+L  
Sbjct: 123 FYNVFFFTYLLAPRTAHRIVGYLEEEAVVSYTQYLAEIDAGRQDNVPAPQIAIDYWKLSQ 182

Query: 181 DSTLRDVVVVIRADE 195
           D+ LRDVV+ +RADE
Sbjct: 183 DARLRDVVIAVRADE 197


>gi|395006406|ref|ZP_10390227.1| Alternative oxidase [Acidovorax sp. CF316]
 gi|394315617|gb|EJE52407.1| Alternative oxidase [Acidovorax sp. CF316]
          Length = 221

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/193 (52%), Positives = 132/193 (68%)

Query: 3   ETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGM 62
           +T+  D + ++  HH      D+ A     AL+F    FF +R+   A++LETV AVPGM
Sbjct: 4   DTHTPDFARSLDAHHPAHGLSDRVALAITLALRFFADTFFAKRYGNRAIVLETVAAVPGM 63

Query: 63  VGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
           VGGML+H + LR      GWI+ LL+EAENERMHLMTFIE+ARP W+ERA++   Q VFF
Sbjct: 64  VGGMLVHLRCLRWMVDDEGWIRTLLDEAENERMHLMTFIEIARPSWFERAVILLTQAVFF 123

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDS 182
             +F  YL S + AHR+VGY EE+AV SYT +L +++ G  EN PAP IAI YW+LP D+
Sbjct: 124 VCFFALYLVSSRTAHRLVGYFEEQAVVSYTLYLAEIDEGRVENVPAPDIAIAYWKLPADA 183

Query: 183 TLRDVVVVIRADE 195
            LRDVV+ +RADE
Sbjct: 184 RLRDVVLAVRADE 196


>gi|114571108|ref|YP_757788.1| alternative oxidase [Maricaulis maris MCS10]
 gi|114341570|gb|ABI66850.1| alternative oxidase [Maricaulis maris MCS10]
          Length = 214

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 133/185 (71%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I + +H KPE   D  A+  V+ L+F    FF +R+   A++LETV AVPGMVGG+L H 
Sbjct: 7   IILDQHRKPEGLGDHIAFGFVKFLRFIADTFFAKRYGHRAVVLETVAAVPGMVGGLLQHL 66

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           K++R+     GWI+ LL+EAENERMHLMTFIE+A+P  +ER ++  VQ +F+N YF  YL
Sbjct: 67  KAIRRIRDDEGWIRTLLDEAENERMHLMTFIEIAKPTLFERIVIMVVQAIFYNCYFFLYL 126

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            +P+ AHR+VGY EEEAV SYT++L+ ++ G  EN  AP IAIDYW LP ++ LR+VV+ 
Sbjct: 127 FAPRTAHRVVGYFEEEAVISYTQYLEGIDAGRHENVAAPQIAIDYWNLPANARLREVVIA 186

Query: 191 IRADE 195
           +RADE
Sbjct: 187 VRADE 191


>gi|254455703|ref|ZP_05069132.1| alternative oxidase 2 [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082705|gb|EDZ60131.1| alternative oxidase 2 [Candidatus Pelagibacter sp. HTCC7211]
          Length = 222

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/184 (55%), Positives = 132/184 (71%)

Query: 12  NVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK 71
           ++ KH+KP+N  D+ A    + L++    FF++++   A++LETV AVPGMV GML H +
Sbjct: 3   DLEKHYKPQNKSDRIALAFTKFLRYIADTFFKKKYGHRAVVLETVAAVPGMVAGMLTHLR 62

Query: 72  SLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLA 131
           SLRK E   GWIK LLEEAENERMHLMTFI++A+P   ER ++   Q +F   Y + YL 
Sbjct: 63  SLRKMEDDRGWIKILLEEAENERMHLMTFIQVAKPTSLERFIIIIAQFLFIIMYSIIYLV 122

Query: 132 SPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           S + AHRIVGY EEEAV SYTE+LK+LE+G  ++ PAP IAIDYW LP  STL+DVV V+
Sbjct: 123 SQRTAHRIVGYFEEEAVFSYTEYLKELESGRIDDQPAPKIAIDYWNLPLHSTLKDVVRVV 182

Query: 192 RADE 195
           R DE
Sbjct: 183 RDDE 186


>gi|410620808|ref|ZP_11331666.1| alternative oxidase 2, mitochondrial [Glaciecola pallidula DSM
           14239 = ACAM 615]
 gi|410159691|dbj|GAC27040.1| alternative oxidase 2, mitochondrial [Glaciecola pallidula DSM
           14239 = ACAM 615]
          Length = 214

 Score =  213 bits (541), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 94/183 (51%), Positives = 133/183 (72%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           ++KHH P  + D+ A+   + L+F   LFF +R+   A++LETV AVPGMVGGM+ H +S
Sbjct: 17  LSKHHTPSGFSDRLAFRLTKLLRFFADLFFAKRYGHRAVVLETVAAVPGMVGGMIRHMRS 76

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR+ +     I  LLEEAENERMHL+TF+++A+P ++ER L+   QGVFF ++   Y+ S
Sbjct: 77  LRRMKDDREAIHTLLEEAENERMHLLTFVQIAQPSFFERMLILLAQGVFFTSFLFLYVVS 136

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIR 192
            + AHR+VGY EEEAV SY+E+L ++++G  EN  AP IAIDYW+LP D+TLRDV++ +R
Sbjct: 137 GRTAHRLVGYFEEEAVYSYSEYLAEVDSGRLENVNAPQIAIDYWKLPADATLRDVIIAVR 196

Query: 193 ADE 195
            DE
Sbjct: 197 NDE 199


>gi|384500340|gb|EIE90831.1| hypothetical protein RO3G_15542 [Rhizopus delemar RA 99-880]
          Length = 260

 Score =  213 bits (541), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 99/181 (54%), Positives = 128/181 (70%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH  P +  DK AY+TV+ L+     +F + H   A++LET+ AVPGMVG ML H KSLR
Sbjct: 41  KHRVPASLGDKGAYYTVKCLRLLPDTYFGKDHYMRAVMLETIAAVPGMVGAMLRHMKSLR 100

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           +     GWI  LL EAENERMHLMT+++  +P  ++R +V   QG+FFNAYFL YL SPK
Sbjct: 101 RMSEDNGWISHLLHEAENERMHLMTWMKCLKPTVWDRLMVLGAQGIFFNAYFLLYLVSPK 160

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
            AHR+ GYLEEEAV SYT FL D++ G  +N PAP +AI+Y+ L P +T+RDVV+ +RAD
Sbjct: 161 TAHRMCGYLEEEAVISYTHFLNDIDQGIIKNGPAPQVAIEYYNLHPQATIRDVVLAVRAD 220

Query: 195 E 195
           E
Sbjct: 221 E 221


>gi|330813949|ref|YP_004358188.1| alternative oxidase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487044|gb|AEA81449.1| alternative oxidase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 217

 Score =  211 bits (538), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 128/185 (69%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           + +  HHKPEN  D+ A+   + L+F    FF++++   A++LETV AVPGM+ GML H 
Sbjct: 1   MKLDSHHKPENISDRIAFGFTKFLRFVADTFFKKKYGHRAVVLETVAAVPGMIAGMLTHL 60

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           KS+RK E   GWIK LL+EAENERMHLM F+ +A+P   ER ++   Q +F   Y   Y+
Sbjct: 61  KSIRKIEDDKGWIKTLLDEAENERMHLMIFVNIAKPTAMERVIILIAQFIFILMYLFIYI 120

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S + AHRIVGY EEEAV SYTEFL +L++G  +N PAP IAIDY+ LP  +TLRDVVV 
Sbjct: 121 ISKRTAHRIVGYFEEEAVYSYTEFLDELDSGKMKNEPAPKIAIDYYSLPLHATLRDVVVR 180

Query: 191 IRADE 195
           +R DE
Sbjct: 181 VREDE 185


>gi|110680239|ref|YP_683246.1| alternative oxidase [Roseobacter denitrificans OCh 114]
 gi|109456355|gb|ABG32560.1| alternative oxidase [Roseobacter denitrificans OCh 114]
          Length = 213

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 131/180 (72%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P + RD+FA   V+ ++     FF +R+   A++LETV AVPGMVGGML H K+LR+
Sbjct: 16  HTPPTDLRDRFALRLVKFMRIFADKFFAKRYGHRAVVLETVAAVPGMVGGMLQHLKALRR 75

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
                GW++ LL+EAENERMHLMTFI++A P   ER L+ A QGVFFN YFL YL +P+ 
Sbjct: 76  LRDDEGWVRELLDEAENERMHLMTFIKVAEPSRLERYLIIAGQGVFFNLYFLLYLFAPRT 135

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+V YLEEEAV SYT++L++++ G   N  AP IAIDYW+LP D+ LR+V+V +RADE
Sbjct: 136 AHRVVAYLEEEAVISYTQYLEEVDAGRVPNIEAPQIAIDYWKLPADARLREVIVAVRADE 195


>gi|254418793|ref|ZP_05032517.1| Alternative oxidase superfamily [Brevundimonas sp. BAL3]
 gi|196184970|gb|EDX79946.1| Alternative oxidase superfamily [Brevundimonas sp. BAL3]
          Length = 230

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/188 (53%), Positives = 134/188 (71%)

Query: 8   DLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGML 67
           DL  ++  HH P +  D+ A+  V++L+F    FF +R+   A++LETV AVPGMVG  L
Sbjct: 5   DLLSDIDVHHAPRSVSDRIAWGFVKSLRFCADTFFAKRYGHRAVVLETVAAVPGMVGATL 64

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H K+LR+     GWI+ L++EAENERMHLMTFIE+ +P  +ER +V AVQ +F+  +F 
Sbjct: 65  THLKALRRMSDDRGWIRTLMDEAENERMHLMTFIEVCQPTLFERFIVMAVQWLFYLFFFG 124

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDV 187
            YL SP+ AHR+VGY EEEAV SYT +L +++ G  ENAPAP IA DYW LP  +TLRDV
Sbjct: 125 LYLVSPRTAHRVVGYFEEEAVISYTHYLAEIDEGRSENAPAPKIARDYWGLPASATLRDV 184

Query: 188 VVVIRADE 195
           V+V+RADE
Sbjct: 185 VLVVRADE 192


>gi|297539819|ref|YP_003675588.1| Alternative oxidase [Methylotenera versatilis 301]
 gi|297259166|gb|ADI31011.1| Alternative oxidase [Methylotenera versatilis 301]
          Length = 212

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 126/180 (70%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HH PEN  D+ A    + L+F    FF  R+   A++LETV  VPGMV G L H K++R 
Sbjct: 14  HHTPENLSDRVALRITKILRFFADTFFANRYGHRAVVLETVAGVPGMVAGALQHLKAIRL 73

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLMTFI +A+P  +ER L+   QG+F+N +FL YL S K 
Sbjct: 74  MQPDNGWIRKLLDEAENERMHLMTFIHIAQPNRFERGLIMLAQGIFYNLFFLLYLISSKT 133

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEAV SYTE+L  ++NG++EN PAP IAIDYW+L   + LR+V++ +R DE
Sbjct: 134 AHRLVGYFEEEAVYSYTEYLAGVDNGTYENVPAPQIAIDYWQLDASARLREVIIAVRNDE 193


>gi|289208825|ref|YP_003460891.1| oxidase [Thioalkalivibrio sp. K90mix]
 gi|288944456|gb|ADC72155.1| Alternative oxidase [Thioalkalivibrio sp. K90mix]
          Length = 209

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 98/191 (51%), Positives = 130/191 (68%), Gaps = 4/191 (2%)

Query: 9   LSIN----VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVG 64
           +SIN    +++HH+P ++ D+ A      ++     FF RR+   A++LETV  VPGMVG
Sbjct: 1   MSINQETDLSRHHEPRDFSDRVARAFTSMMRLFADTFFARRYGHRAVVLETVAGVPGMVG 60

Query: 65  GMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNA 124
             L H +SLR+ E   GWI+ L+EEAENERMHL+TFIE+A P W ER L+   QG F+  
Sbjct: 61  ATLQHLRSLRRMEDDHGWIRTLMEEAENERMHLLTFIEIASPNWLERLLIILAQGFFYTL 120

Query: 125 YFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTL 184
           YFL Y+ SP+ AHRIVGY EEEAV SYT++L+++E G+ EN PAP  AI YW LP D+ L
Sbjct: 121 YFLIYVISPRTAHRIVGYFEEEAVISYTDYLEEVETGAIENIPAPDRAIQYWDLPEDARL 180

Query: 185 RDVVVVIRADE 195
            DV+  +R DE
Sbjct: 181 SDVIRAVREDE 191


>gi|381396187|ref|ZP_09921879.1| alternative oxidase 1a, mitochondrial [Glaciecola punicea DSM 14233
           = ACAM 611]
 gi|379328367|dbj|GAB57012.1| alternative oxidase 1a, mitochondrial [Glaciecola punicea DSM 14233
           = ACAM 611]
          Length = 217

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 98/192 (51%), Positives = 136/192 (70%)

Query: 4   TYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMV 63
           ++K +++  ++KHH P    D+FA+   + L+F    FF +R+   A++LETV AVPGMV
Sbjct: 8   SFKKEVADPLSKHHMPAGTSDRFAFRLTKLLRFFADHFFAKRYGHRAVVLETVAAVPGMV 67

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFN 123
            GM+ H +SLR+ +     I  LLEEAENERMHLMTFI++A+P  +ER L+   QG FF 
Sbjct: 68  AGMVRHMRSLRRMKDDREAIHTLLEEAENERMHLMTFIKIAQPSLFERWLIILAQGFFFA 127

Query: 124 AYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDST 183
           ++F+ Y+ S + AHR+VGY EEEAV SYTE+L  +++G  EN PAP IAIDYW LP D+ 
Sbjct: 128 SFFILYVVSGRTAHRLVGYFEEEAVYSYTEYLAAVDSGLLENVPAPDIAIDYWNLPKDAR 187

Query: 184 LRDVVVVIRADE 195
           LRDV++V+R DE
Sbjct: 188 LRDVIIVVRQDE 199


>gi|393726239|ref|ZP_10346166.1| alternative oxidase [Sphingomonas sp. PAMC 26605]
          Length = 237

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 127/180 (70%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HH P  + D+FA    + L+F   +FF +R+   A++LETV AVPGMVG M  H K LR 
Sbjct: 24  HHVPHGFADQFALGFTKLLRFCADIFFAKRYGHRAIVLETVAAVPGMVGAMFTHLKCLRW 83

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
                GWI+ L+EEAENERMHLMTF+E+A+P W+ER ++  VQGVF  A+ L YL S K 
Sbjct: 84  MRDDQGWIRTLMEEAENERMHLMTFVEIAKPTWFERTVILLVQGVFLIAFSLLYLLSAKT 143

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEAV SYT +L++++ G   N PAPAIA  YW++  D+TLRDVV+V+R DE
Sbjct: 144 AHRVVGYFEEEAVTSYTLYLQEIDEGRSPNVPAPAIARHYWKMADDATLRDVVLVVRDDE 203


>gi|85704383|ref|ZP_01035485.1| putative oxidase [Roseovarius sp. 217]
 gi|85670791|gb|EAQ25650.1| putative oxidase [Roseovarius sp. 217]
          Length = 221

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 132/192 (68%)

Query: 4   TYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMV 63
           +++ D + ++  HH P +  D+ A   V+ ++     FF +R+   A++LETV AVPGMV
Sbjct: 10  SFQHDDTTDLDVHHTPRDIHDRVALRIVKFMRIFADAFFSKRYGHRAVVLETVAAVPGMV 69

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFN 123
           GG+L H KS+R      GWI+ LL+EAENERMHLMTFI +A+P   ER L+   Q +F+N
Sbjct: 70  GGLLRHLKSIRHIRDDQGWIRELLDEAENERMHLMTFIHIAQPSRAERMLIMVAQMIFYN 129

Query: 124 AYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDST 183
            +F  YL +P+ AHRIVGYLEEEAV SYT++L +++ G  EN  AP IAIDYW L  D+ 
Sbjct: 130 VFFFTYLFAPRTAHRIVGYLEEEAVVSYTQYLAEIDAGGQENVAAPQIAIDYWNLGADAR 189

Query: 184 LRDVVVVIRADE 195
           LRDVV+ +R+DE
Sbjct: 190 LRDVVIRVRSDE 201


>gi|254420740|ref|ZP_05034464.1| Alternative oxidase superfamily [Brevundimonas sp. BAL3]
 gi|196186917|gb|EDX81893.1| Alternative oxidase superfamily [Brevundimonas sp. BAL3]
          Length = 239

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 95/180 (52%), Positives = 128/180 (71%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HH+P  + D+FA    + L+F    FF +R+   A++LETV AVPGMVG  + H   LR+
Sbjct: 24  HHEPHGFSDRFALGFTKLLRFSADTFFAKRYGHRAIVLETVAAVPGMVGATIQHLTCLRR 83

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ L+EEAENERMHLMTFIE+A+P ++ER ++   Q VF+  +FL YL S + 
Sbjct: 84  MKDDDGWIRTLMEEAENERMHLMTFIEVAKPTYFERLVIQIAQAVFYVGFFLLYLVSART 143

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEAV SYT +LK+++ G   N PAP IA  YW++ PD+TLRDVV+V+RADE
Sbjct: 144 AHRVVGYFEEEAVISYTLYLKEIDEGRSPNVPAPEIAKHYWKMAPDATLRDVVLVVRADE 203


>gi|378548284|sp|F4P6T0.1|AOX_BATDJ RecName: Full=Ubiquinol oxidase, mitochondrial; AltName:
           Full=Alternative oxidase; Flags: Precursor
 gi|328768827|gb|EGF78872.1| hypothetical protein BATDEDRAFT_32033 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 316

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 130/180 (72%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P +  D  AY  V+ L+F   LFF+++++  A++LETV AVPGMV GML H  SLR 
Sbjct: 93  HRIPVSISDWTAYGIVRFLRFFADLFFRKQYVHRAVVLETVAAVPGMVAGMLRHLTSLRL 152

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
             H GGWI  LL EAENER+HL+T++++ +P  +ER LV  VQ +FFN YFLAY+  PK 
Sbjct: 153 MRHDGGWISHLLSEAENERLHLLTWMKVCQPSLFERMLVALVQTLFFNVYFLAYMLFPKT 212

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGYLEEEA+ SYT FL +++ G+  N PAP +AIDYW L  D+T+RDVV+ +RADE
Sbjct: 213 AHRMVGYLEEEAIISYTHFLAEIDAGNIPNGPAPKLAIDYWNLKEDATVRDVVLAVRADE 272


>gi|74317948|ref|YP_315688.1| oxidase [Thiobacillus denitrificans ATCC 25259]
 gi|74057443|gb|AAZ97883.1| putative oxidase [Thiobacillus denitrificans ATCC 25259]
          Length = 232

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 125/180 (69%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P + RD+ A   V+ +K     FF RR+   A++LET+ AVPGMVG  L H ++LR+
Sbjct: 30  HRPPADLRDRIALGFVKLVKAAADAFFGRRYGHRAVVLETIAAVPGMVGATLQHLRALRR 89

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LLEEAENERMHLMTFI +A+P  +ER LV   Q  F+N YF  YLASPK 
Sbjct: 90  MQGDRGWIRTLLEEAENERMHLMTFIHVAQPTQFERLLVVLAQAFFYNLYFFVYLASPKT 149

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHRI GYLEEEAV+SYTE+L  ++ G+  N  AP IAI+YW LP D+ LR+V+V +R DE
Sbjct: 150 AHRITGYLEEEAVHSYTEYLARVDGGACTNVAAPGIAIEYWALPADARLREVIVAVRDDE 209


>gi|295690408|ref|YP_003594101.1| alternative oxidase [Caulobacter segnis ATCC 21756]
 gi|295432311|gb|ADG11483.1| Alternative oxidase [Caulobacter segnis ATCC 21756]
          Length = 229

 Score =  205 bits (521), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/185 (54%), Positives = 130/185 (70%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I++  HH+P+   D  A+  V+AL+F    FF +R+   A++LETV AVPGMVG  L H 
Sbjct: 6   IDLDVHHQPKGVSDVIAFGFVKALRFCADTFFAKRYGHRAVVLETVAAVPGMVGATLNHL 65

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           K LR+ E   GWIK L++EAENERMHLMTFIE+A+P  +ER +V A Q VF+  +F  YL
Sbjct: 66  KCLRRMEGDKGWIKTLMDEAENERMHLMTFIEVAKPTLFERFVVVAAQWVFYLFFFALYL 125

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S K AHR+VGY EEEAV SYT +L +++ G   N  AP IA+DYW+LP  +TLRDVV V
Sbjct: 126 ISSKTAHRVVGYFEEEAVISYTHYLAEIDEGRSANVAAPQIALDYWKLPTGATLRDVVEV 185

Query: 191 IRADE 195
           +RADE
Sbjct: 186 VRADE 190


>gi|208436656|gb|ACI28874.1| mitochondrial alternative oxidase 2, partial [Vitis vinifera]
          Length = 124

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/120 (76%), Positives = 107/120 (89%)

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
           FE SGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQGVFFNA+F+ YL SPKL
Sbjct: 1   FEQSGGWIKALLEEAENERMHLMTMVELVQPKWYERVLVLTVQGVFFNAFFVLYLLSPKL 60

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGYLEEEA++SYTE+LKD+++G  EN PAPAIAIDYWRLP D+TL+DV+ VIRADE
Sbjct: 61  AHRVVGYLEEEAIHSYTEYLKDIDSGKIENVPAPAIAIDYWRLPKDATLKDVITVIRADE 120


>gi|330790445|ref|XP_003283307.1| hypothetical protein DICPUDRAFT_44721 [Dictyostelium purpureum]
 gi|325086732|gb|EGC40117.1| hypothetical protein DICPUDRAFT_44721 [Dictyostelium purpureum]
          Length = 320

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 132/179 (73%), Gaps = 1/179 (0%)

Query: 17  HKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKF 76
           ++P+   D FA  TVQ L+  ++LFF+ +++ +A++LET+ +VPG+ GG +LH ++LR  
Sbjct: 81  YEPKTIGDHFAKNTVQLLRKVSNLFFREKYIHYAIVLETIASVPGLCGGAMLHLRALRTM 140

Query: 77  EHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLA 136
           E S  WIKAL++E+ENER+HLM+FIEL +P   ER +V A Q VF+N Y + Y  SPK+ 
Sbjct: 141 E-SNNWIKALMDESENERIHLMSFIELTKPTLIERTMVAAAQAVFWNLYLVGYAISPKIM 199

Query: 137 HRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           HR+VGYLE EAV +YT FL D++ G  EN PA  +AI+YW LP D+TLRD+++VIR DE
Sbjct: 200 HRVVGYLEHEAVKTYTNFLADIDAGKVENIPASKLAIEYWGLPADATLRDMILVIREDE 258


>gi|359786470|ref|ZP_09289605.1| Alternative oxidase [Halomonas sp. GFAJ-1]
 gi|359296320|gb|EHK60573.1| Alternative oxidase [Halomonas sp. GFAJ-1]
          Length = 212

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 134/180 (74%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H++P  + D+ AY  V+ ++F   +FF  R+   A++LETV AVPGMVGG + H  +LR+
Sbjct: 17  HYQPRGFSDRIAYRLVRFMRFFADVFFAGRYGHRAVILETVAAVPGMVGGAIQHLHALRR 76

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLMTFIE+A+P  +ER ++   QG+FFN +FL YL S K 
Sbjct: 77  IKDDDGWIRTLLDEAENERMHLMTFIEVAKPNRFERFIIMLAQGIFFNLFFLLYLCSSKT 136

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGYLEEEAV SYTE+L+ ++ G +EN PAP IAIDYW LP D+ LR+VVV +RADE
Sbjct: 137 AHRVVGYLEEEAVYSYTEYLEGIDRGEYENIPAPQIAIDYWNLPQDARLREVVVAVRADE 196


>gi|254453559|ref|ZP_05066996.1| alternative oxidase [Octadecabacter arcticus 238]
 gi|198267965|gb|EDY92235.1| alternative oxidase [Octadecabacter arcticus 238]
          Length = 239

 Score =  202 bits (515), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 130/180 (72%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HH P +  D+ A   V+ ++F    FF  R+   A++LETV AVPGMVGG+L H +++R 
Sbjct: 40  HHVPHSMNDRAALRVVKTMRFFADRFFANRYGHRAVVLETVAAVPGMVGGLLQHLRAIRH 99

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
                GWIK L+EEA+NERMHLMTFI++A+P  +ER L+   Q VF+N YF  YL +PK 
Sbjct: 100 IRDDQGWIKELIEEADNERMHLMTFIQIAQPSRFERTLIMVAQAVFYNLYFFLYLLAPKT 159

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGYLEEEAV SY+ +L++++ G  EN  AP IAI+YW+LP D+ LRDVVVV+RADE
Sbjct: 160 AHRVVGYLEEEAVISYSHYLEEIDAGRVENVAAPQIAINYWKLPSDARLRDVVVVVRADE 219


>gi|209694266|ref|YP_002262194.1| hypothetical protein VSAL_I0677 [Aliivibrio salmonicida LFI1238]
 gi|208008217|emb|CAQ78362.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 212

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 94/181 (51%), Positives = 123/181 (67%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH       ++ AY   Q LKF  ++F+  ++   A++LET+ AVPGMV GM  H K+LR
Sbjct: 8   KHKATTKMSERIAYKITQCLKFLLNIFYGSQYAKRAVILETIAAVPGMVAGMFNHLKALR 67

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + +   GWI+ LL EAENERMHLM F+++A+P+W ER LV   QGVF   Y   YL S K
Sbjct: 68  RMKDDEGWIRELLNEAENERMHLMIFLDIAKPRWIERTLVLLGQGVFMVVYSFIYLLSSK 127

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
           +AHR+VGY EEEA  SYTE+L  ++NG  EN  AP IAIDY++LP D+ LRDV++ IR D
Sbjct: 128 VAHRVVGYFEEEACKSYTEYLSKIDNGDVENEAAPQIAIDYYQLPNDALLRDVILKIRDD 187

Query: 195 E 195
           E
Sbjct: 188 E 188


>gi|118594227|ref|ZP_01551574.1| NADH:flavin oxidoreductase/NADH oxidase [Methylophilales bacterium
           HTCC2181]
 gi|118440005|gb|EAV46632.1| NADH:flavin oxidoreductase/NADH oxidase [Methylophilales bacterium
           HTCC2181]
          Length = 589

 Score =  201 bits (512), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 126/183 (68%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           ++KH  PEN  D  A +  + L+     FF +R+   A++LETV AVPGMV GM +H K 
Sbjct: 1   MSKHRTPENISDFVALFITKFLRLLADTFFSKRYGHRAVVLETVAAVPGMVAGMWIHLKC 60

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LRK     GWIK LL+EAENERMHLMTFIE+A+P W+ER L+   Q +F++ YF+ Y+  
Sbjct: 61  LRKMTSDRGWIKTLLDEAENERMHLMTFIEIAKPNWFERGLILFAQALFWHFYFILYVFF 120

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIR 192
           P+ AHR+VGY EEEAV SYT +L+ +EN    N  AP IAI+YW+L PD+ L DV+ V+R
Sbjct: 121 PRTAHRLVGYFEEEAVISYTNYLEQVENDLSLNVAAPQIAINYWKLKPDARLIDVIKVVR 180

Query: 193 ADE 195
            DE
Sbjct: 181 DDE 183


>gi|281211621|gb|EFA85783.1| alternative oxidase [Polysphondylium pallidum PN500]
          Length = 317

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 127/179 (70%), Gaps = 1/179 (0%)

Query: 17  HKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKF 76
           H+P+N  D  A + V  L+  ++L F+ +++ +A +LETV AVPGMV GML H K+LR+ 
Sbjct: 86  HQPQNISDNVARFAVWLLRKASNLVFKEKYIHYACVLETVAAVPGMVAGMLQHLKTLRRM 145

Query: 77  EHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLA 136
           EH+  WIK LL+EAENERMHLMTF+E++ P   ER L+   QG ++NA+ L YL SPK A
Sbjct: 146 EHNN-WIKILLDEAENERMHLMTFMEISMPTKLERNLITLAQGAYWNAFLLFYLISPKTA 204

Query: 137 HRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           HR  GYLEEEAV +YT  L DL+ G  EN  AP IA +YW LP D+ LRDV++VIR DE
Sbjct: 205 HRFTGYLEEEAVITYTNMLHDLDAGKVENVEAPQIAREYWGLPDDAKLRDVILVIRQDE 263


>gi|119947000|ref|YP_944680.1| alternative oxidase [Psychromonas ingrahamii 37]
 gi|119865604|gb|ABM05081.1| alternative oxidase [Psychromonas ingrahamii 37]
          Length = 211

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 121/180 (67%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H KP    +  AY   Q+LKF  +LF+ +++   A++LET+ AVPGMV GML H K+LR+
Sbjct: 8   HQKPNKVSEYIAYKITQSLKFMLNLFYGKKYAKRAVILETIAAVPGMVAGMLNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
                GWI+ LL+EAENERMHLM F+++A+P W ER LV   QG+F   Y   Y+ S K 
Sbjct: 68  MRDDQGWIRELLDEAENERMHLMIFLDIAKPTWIERTLVLLGQGIFLIIYTFLYILSSKT 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            HR+VGY EEEA  SY+EFL+ ++ G  EN PAP IA DY+ L  D+ LRDVV+ IR DE
Sbjct: 128 GHRVVGYFEEEACKSYSEFLQKIDAGEVENVPAPKIAKDYYALDDDACLRDVVLCIREDE 187


>gi|452753499|ref|ZP_21953223.1| Alternative oxidase [alpha proteobacterium JLT2015]
 gi|451959189|gb|EMD81621.1| Alternative oxidase [alpha proteobacterium JLT2015]
          Length = 229

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 96/185 (51%), Positives = 128/185 (69%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I++  HHKP  + D+ A+   +AL++    FF  R+   A++LETV AVPGMVG  + H 
Sbjct: 6   IDLGVHHKPRGFSDRVAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGATINHL 65

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
             LR+     GWIK L++EAENERMHLMTFIE+++P  +ERA++  VQ VF+  +F  YL
Sbjct: 66  ACLRRMCDDKGWIKTLMDEAENERMHLMTFIEISKPTLFERAVIIGVQWVFYLFFFALYL 125

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S K AHR+VGY EEEAV SYT +L +++ G  +N PAP IA  YW LP  +TLRDVV+V
Sbjct: 126 VSSKTAHRVVGYFEEEAVISYTHYLTEIDEGRSDNVPAPEIAKKYWDLPDSATLRDVVLV 185

Query: 191 IRADE 195
           +RADE
Sbjct: 186 VRADE 190


>gi|87199593|ref|YP_496850.1| alternative oxidase [Novosphingobium aromaticivorans DSM 12444]
 gi|87135274|gb|ABD26016.1| alternative oxidase [Novosphingobium aromaticivorans DSM 12444]
          Length = 229

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/185 (52%), Positives = 129/185 (69%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I+++ HHKP    D+ A+   +AL++    FF  R+   A++LETV AVPGMVG  + H 
Sbjct: 6   IDLSVHHKPGGLSDRIAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGATINHL 65

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
             LR+     GWIK L++EAENERMHLMTFIE+++P  +ERA++  VQ VF+  +F  YL
Sbjct: 66  ACLRRMCDDKGWIKTLMDEAENERMHLMTFIEISKPTLFERAVIMGVQWVFYLFFFGLYL 125

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            SPK AHR+VGY EEEAV SYT +L +++ G   N PAPAIA  YW LP ++ LRDVV+V
Sbjct: 126 VSPKTAHRVVGYFEEEAVISYTHYLAEIDQGRSANVPAPAIAKRYWGLPDNAMLRDVVLV 185

Query: 191 IRADE 195
           +RADE
Sbjct: 186 VRADE 190


>gi|59711185|ref|YP_203961.1| alternative oxidase 1 [Vibrio fischeri ES114]
 gi|59479286|gb|AAW85073.1| alternative oxidase 1 [Vibrio fischeri ES114]
          Length = 211

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 122/181 (67%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH       +K AY   Q LKF  ++F+  ++   A++LET+ AVPGMV GM  H K+LR
Sbjct: 7   KHKATNKISEKIAYKITQCLKFLLNIFYGSKYAKRAVILETIAAVPGMVAGMFNHLKALR 66

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + +   GWI+ LL EAENERMHLM F+++A+P+W ER LV   Q VF   Y   YL S K
Sbjct: 67  RMKDDQGWIQELLSEAENERMHLMIFLDIAKPRWIERLLVLLGQAVFIVVYSFIYLLSSK 126

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
           +AHR+VGY EEEA  SYTE+L  ++ G+ EN  AP IAIDY++LP D+ LRDV++ IR D
Sbjct: 127 IAHRVVGYFEEEACKSYTEYLAKIDEGTVENEAAPQIAIDYYQLPSDAMLRDVILKIRND 186

Query: 195 E 195
           E
Sbjct: 187 E 187


>gi|387593301|gb|EIJ88325.1| alternative oxidase superfamily protein [Nematocida parisii ERTm3]
 gi|387595986|gb|EIJ93608.1| alternative oxidase superfamily protein [Nematocida parisii ERTm1]
          Length = 232

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 98/187 (52%), Positives = 131/187 (70%), Gaps = 1/187 (0%)

Query: 9   LSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLL 68
           + + V KH   +++ D FA+ TV+ L+    + F RR++  A++LETV A+PGMVGG++ 
Sbjct: 29  VDVEVGKHLPQKDFSDIFAWRTVKGLRMIADVVFYRRYVHRAIVLETVAAIPGMVGGVIR 88

Query: 69  HCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLA 128
           H KSLR  +     I+ LL EAENERMHLMT++E+A+P   ER +V  +QGVFFNAY L 
Sbjct: 89  HLKSLRNMKDDSN-IRILLAEAENERMHLMTWMEVAKPLLIERLIVMGLQGVFFNAYLLL 147

Query: 129 YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVV 188
           YL S + AHR+VGYLEEEA+ SYTE +K++E G   N PAP IA  YW LP ++TL DV 
Sbjct: 148 YLISKRTAHRLVGYLEEEAIISYTEMVKEIEAGIIPNVPAPEIAKKYWNLPSNATLLDVT 207

Query: 189 VVIRADE 195
           + IRADE
Sbjct: 208 LAIRADE 214


>gi|67906549|gb|AAY82655.1| predicted alternative respiratory pathway oxidase [uncultured
           bacterium MedeBAC49C08]
          Length = 213

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 97/182 (53%), Positives = 122/182 (67%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSL 73
           +KH  P    D+  Y   +AL+    LFF++R+   A++LETV AVPGMV GML H KSL
Sbjct: 17  SKHKYPHGLSDRSGYLITRALRIAADLFFRKRYGHRAVVLETVAAVPGMVAGMLHHFKSL 76

Query: 74  RKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASP 133
           R      G IK LL+EAENERMHLMTFIE+++P  +ER LV + Q VF   YF  Y+   
Sbjct: 77  RSMTDDDGIIKELLDEAENERMHLMTFIEISKPTLFERLLVLSAQIVFGTFYFFLYVFFR 136

Query: 134 KLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRA 193
             AHR++GY EEEAV SYTEFL +++ G+ EN  AP IA+DYW L   +TLRDVVV +R 
Sbjct: 137 GTAHRMIGYFEEEAVTSYTEFLDEIDKGTIENVAAPKIAVDYWNLGNKATLRDVVVAVRN 196

Query: 194 DE 195
           DE
Sbjct: 197 DE 198


>gi|197334925|ref|YP_002155335.1| alternative oxidase 2 [Vibrio fischeri MJ11]
 gi|197316415|gb|ACH65862.1| alternative oxidase 2 [Vibrio fischeri MJ11]
          Length = 211

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 122/181 (67%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH       +K AY   Q LKF  ++F+  ++   A++LET+ AVPGMV GM  H K+LR
Sbjct: 7   KHKATNKISEKIAYKITQCLKFLLNIFYGSKYAKRAVILETIAAVPGMVAGMFNHLKALR 66

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + +   GWI+ LL EAENERMHLM F+++A+P+W ER LV   Q VF   Y   YL S K
Sbjct: 67  RMKDDQGWIQELLSEAENERMHLMIFLDIAKPRWIERLLVLLGQAVFIVVYSFIYLLSSK 126

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
           +AHR+VGY EEEA  SYTE+L  ++ G+ EN  AP IAIDY++LP D+ LRDV++ IR D
Sbjct: 127 IAHRVVGYFEEEACKSYTEYLAKIDEGAVENEAAPQIAIDYYQLPSDAMLRDVILKIRND 186

Query: 195 E 195
           E
Sbjct: 187 E 187


>gi|94498336|ref|ZP_01304895.1| Alternative oxidase [Sphingomonas sp. SKA58]
 gi|94422216|gb|EAT07258.1| Alternative oxidase [Sphingomonas sp. SKA58]
          Length = 236

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 94/185 (50%), Positives = 128/185 (69%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           +++T HH P + RD+ A    + L+     FF +R+   A++LETV AVPGMVG  L H 
Sbjct: 15  VDLTVHHTPRDLRDRIALGFTKVLRLCADTFFAKRYGHRAIVLETVAAVPGMVGATLTHL 74

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           + LR+ +   GWI+ L+EEAENERMHLMTFIE+A+P  +ER ++  VQ  F+ A+F  YL
Sbjct: 75  RCLRRMQGDNGWIRTLMEEAENERMHLMTFIEVAQPSLFERLVILLVQWAFYLAFFGLYL 134

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S + AHR+VGY EEEAV SYT +LK+++ G   +  AP IA  YW+LP  +TLRDVV+V
Sbjct: 135 VSARTAHRVVGYFEEEAVISYTLYLKEIDEGRSPDVAAPMIARRYWKLPDTATLRDVVLV 194

Query: 191 IRADE 195
           +RADE
Sbjct: 195 VRADE 199


>gi|90578977|ref|ZP_01234787.1| alternative oxidase [Photobacterium angustum S14]
 gi|90439810|gb|EAS64991.1| alternative oxidase [Photobacterium angustum S14]
          Length = 211

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H +   + ++ AY   Q LK+  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HRETTKFSERLAYKITQLLKYSLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWIK LL EA+NERMHLM F+++A+P W ERALV   Q VF   Y + YL S K+
Sbjct: 68  MKDDEGWIKELLSEADNERMHLMIFLDIAKPSWVERALVLLGQAVFICVYSIIYLTSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA  SYTEFL+ +++G  EN  AP IAI+Y+ L  D+ LRDVV+ IR DE
Sbjct: 128 AHRVVGYFEEEACKSYTEFLEKIDSGELENVAAPQIAINYYELHDDAKLRDVVLRIREDE 187


>gi|350530260|ref|ZP_08909201.1| hypothetical protein VrotD_04015 [Vibrio rotiferianus DAT722]
          Length = 211

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 125/180 (69%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYVALRITKLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P   ER LV   QGVF   Y + YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSLIERLLVLLGQGVFILVYSIIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +AIDY++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAIDYYKLPADAMLRDVILRIREDE 187


>gi|378754341|gb|EHY64375.1| alternative oxidase superfamily protein [Nematocida sp. 1 ERTm2]
          Length = 232

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 97/187 (51%), Positives = 131/187 (70%), Gaps = 1/187 (0%)

Query: 9   LSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLL 68
           + + V KH    ++ D FA+ TV+ L+    + F +R++  A++LETV A+PGMVGG++ 
Sbjct: 29  VDVEVGKHLPQRDFSDVFAWRTVKGLRMIADVVFYKRYVHRAIVLETVAAIPGMVGGLIR 88

Query: 69  HCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLA 128
           H KSLRK E     I+ LL EAENERMHLMT++E+A+P   ER +V A+QGVFFNAY + 
Sbjct: 89  HLKSLRKMEDDTN-IRVLLAEAENERMHLMTWMEVAKPLLLERLIVMALQGVFFNAYLML 147

Query: 129 YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVV 188
           Y+ S K AHR+VGYLEEEA+ SYTE +++++ G   N PAP IA  YW L  D+TL DV 
Sbjct: 148 YIVSAKTAHRLVGYLEEEAIISYTEMVREIQAGIIPNTPAPEIAKKYWNLGEDATLLDVT 207

Query: 189 VVIRADE 195
           + IRADE
Sbjct: 208 LAIRADE 214


>gi|269959615|ref|ZP_06173996.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|424047885|ref|ZP_17785441.1| alternative oxidase family protein [Vibrio cholerae HENC-03]
 gi|269835673|gb|EEZ89751.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|408883195|gb|EKM21982.1| alternative oxidase family protein [Vibrio cholerae HENC-03]
          Length = 211

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYIALRITKLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P   ER LV   QGVF   Y   YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSLVERLLVLLGQGVFIVVYSFIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +AIDY++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAIDYYKLPADAMLRDVILRIREDE 187


>gi|197106479|ref|YP_002131856.1| Alternative oxidase [Phenylobacterium zucineum HLK1]
 gi|196479899|gb|ACG79427.1| Alternative oxidase [Phenylobacterium zucineum HLK1]
          Length = 229

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 104/184 (56%), Positives = 130/184 (70%)

Query: 12  NVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK 71
           ++T HHKP    D+ AY  V+AL+F    FF +R+   A++LETV AVPGMVG  L H K
Sbjct: 7   DLTVHHKPRGLSDRVAYGFVKALRFCADTFFAKRYGHRAVVLETVAAVPGMVGATLNHLK 66

Query: 72  SLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLA 131
            LR+ E   GWIK L++EAENERMHLMTFIE+A+P  +ER +V A Q VF+  +F  YL 
Sbjct: 67  CLRRMEDDRGWIKTLMDEAENERMHLMTFIEVAKPTLFERFVVVAAQWVFYLFFFFLYLI 126

Query: 132 SPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           SPK AHR+VGY EEEAV SYT +L +++ G  EN  AP +A  YW LP D+TLRDVV V+
Sbjct: 127 SPKTAHRVVGYFEEEAVISYTHYLAEIDEGRSENVAAPELAKRYWNLPEDATLRDVVEVV 186

Query: 192 RADE 195
           RADE
Sbjct: 187 RADE 190


>gi|424037571|ref|ZP_17776332.1| alternative oxidase family protein [Vibrio cholerae HENC-02]
 gi|408895390|gb|EKM31796.1| alternative oxidase family protein [Vibrio cholerae HENC-02]
          Length = 211

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYVALRITKLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P   ER LV   QGVF   Y   YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSLVERLLVLLGQGVFIVVYSFIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +AIDY++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAIDYYKLPTDAMLRDVILRIREDE 187


>gi|90414281|ref|ZP_01222260.1| alternative oxidase [Photobacterium profundum 3TCK]
 gi|90324619|gb|EAS41166.1| alternative oxidase [Photobacterium profundum 3TCK]
          Length = 211

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 94/181 (51%), Positives = 121/181 (66%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH       +  AY   Q LKF  ++F+  ++   A++LET+ AVPGMV GM  H K+LR
Sbjct: 7   KHRTASKLSEHVAYKITQCLKFLLNIFYGTKYAKRAVILETIAAVPGMVAGMFNHLKALR 66

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + +   GWI+ LL+EAENERMHLM F+ +A+P W ERALV   QG F   Y L YL S K
Sbjct: 67  RMKDDEGWIRELLDEAENERMHLMIFLNIAKPSWVERALVLIGQGAFIVVYSLIYLLSSK 126

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
           +AHR+VGY EEEA  SYTE+L  ++ G  EN  AP IAI+Y++LP D+ LRDV+V IR D
Sbjct: 127 IAHRVVGYFEEEACKSYTEYLSKIDAGEVENVAAPKIAIEYYQLPLDAMLRDVIVKIRND 186

Query: 195 E 195
           E
Sbjct: 187 E 187


>gi|424032045|ref|ZP_17771466.1| alternative oxidase family protein [Vibrio cholerae HENC-01]
 gi|408876457|gb|EKM15574.1| alternative oxidase family protein [Vibrio cholerae HENC-01]
          Length = 211

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYVALRITKLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P   ER LV   QGVF   Y   YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSLVERLLVLLGQGVFIVVYSFIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +AIDY++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAIDYYKLPTDAMLRDVILRIREDE 187


>gi|289164721|ref|YP_003454859.1| oxidase [Legionella longbeachae NSW150]
 gi|288857894|emb|CBJ11749.1| putative alternative oxidase (eukaryotic-like) [Legionella
           longbeachae NSW150]
          Length = 228

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 1/180 (0%)

Query: 17  HKP-ENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HKP + + D+FAY  V+  +F    FFQRR+   A++LETV AVPGMVG  LLH + LRK
Sbjct: 5   HKPAKTFSDRFAYGLVKFFRFFADTFFQRRYGNRAIVLETVAAVPGMVGAALLHLRCLRK 64

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            ++  GWIK LL+EAENERMHL+TF+ +A+P W+ER ++F  Q +F   YFL Y+ S K 
Sbjct: 65  IKNDEGWIKTLLDEAENERMHLITFMYIAKPNWFERFIIFIAQAIFVILYFLMYVISSKT 124

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR VGYLEEEAV SYT +L++L+ G  EN PAP IA  YW L  ++ LRDV++ +R DE
Sbjct: 125 AHRFVGYLEEEAVISYTHYLQELDEGHIENCPAPEIAKSYWGLSSNAQLRDVLLAVRKDE 184


>gi|330446299|ref|ZP_08309951.1| alternative oxidase family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328490490|dbj|GAA04448.1| alternative oxidase family protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 211

 Score =  198 bits (503), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 122/180 (67%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H +     ++ AY   Q LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HRETNKISERLAYKITQLLKFSLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWIK LL EA+NERMHLM F+++A+P W ER LV   Q VF   Y + YL S K+
Sbjct: 68  MKDDEGWIKELLSEADNERMHLMIFLDIAKPSWIERGLVLLGQAVFICVYSIIYLCSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA  SYTEFL+ +++G  EN  AP IAI Y++L  D+ LRDVV+ IR DE
Sbjct: 128 AHRVVGYFEEEACKSYTEFLEKIDSGKLENVAAPDIAIKYYQLQDDARLRDVVLRIREDE 187


>gi|89072986|ref|ZP_01159533.1| alternative oxidase [Photobacterium sp. SKA34]
 gi|89051204|gb|EAR56660.1| alternative oxidase [Photobacterium sp. SKA34]
          Length = 211

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 123/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H +   + ++ AY   Q LK+  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HRETNKFSERLAYKITQLLKYSLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWIK LL EA+NERMHLM F+++A+P W ER LV   Q VF   Y + YL S K+
Sbjct: 68  MKDDEGWIKELLSEADNERMHLMIFLDIAKPSWVERGLVLLGQAVFICVYSIIYLTSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA  SYTEFL+ +++G  EN  AP IAI+Y+ L  D+ LRDVV+ IR DE
Sbjct: 128 AHRVVGYFEEEACKSYTEFLEKIDSGELENVAAPQIAINYYELHDDAKLRDVVLRIREDE 187


>gi|270156838|ref|ZP_06185495.1| alternative oxidase/tellurite resistance protein TehB [Legionella
           longbeachae D-4968]
 gi|269988863|gb|EEZ95117.1| alternative oxidase/tellurite resistance protein TehB [Legionella
           longbeachae D-4968]
          Length = 503

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 128/180 (71%), Gaps = 1/180 (0%)

Query: 17  HKP-ENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HKP + + D+FAY  V+  +F    FFQRR+   A++LETV AVPGMVG  LLH + LRK
Sbjct: 5   HKPAKTFSDRFAYGLVKFFRFFADTFFQRRYGNRAIVLETVAAVPGMVGAALLHLRCLRK 64

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            ++  GWIK LL+EAENERMHL+TF+ +A+P W+ER ++F  Q +F   YFL Y+ S K 
Sbjct: 65  IKNDEGWIKTLLDEAENERMHLITFMYIAKPNWFERFIIFIAQAIFVILYFLMYVISSKT 124

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR VGYLEEEAV SYT +L++L+ G  EN PAP IA  YW L  ++ LRDV++ +R DE
Sbjct: 125 AHRFVGYLEEEAVISYTHYLQELDEGHIENCPAPEIAKSYWGLSSNAQLRDVLLAVRKDE 184


>gi|444427732|ref|ZP_21223103.1| hypothetical protein B878_17259 [Vibrio campbellii CAIM 519 = NBRC
           15631]
 gi|444239030|gb|ELU50610.1| hypothetical protein B878_17259 [Vibrio campbellii CAIM 519 = NBRC
           15631]
          Length = 211

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYVALRITKLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P   ER LV   QGVF   Y   YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSLIERLLVLLGQGVFILVYSFIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +A+DY++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAVDYYKLPADAMLRDVILRIREDE 187


>gi|156973270|ref|YP_001444177.1| hypothetical protein VIBHAR_00951 [Vibrio harveyi ATCC BAA-1116]
 gi|388600478|ref|ZP_10158874.1| hypothetical protein VcamD_11319 [Vibrio campbellii DS40M4]
 gi|156524864|gb|ABU69950.1| hypothetical protein VIBHAR_00951 [Vibrio harveyi ATCC BAA-1116]
          Length = 211

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYVALRITKLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P   ER LV   QGVF   Y   YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSLIERLLVLLGQGVFILVYSFIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +A+DY++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAVDYYKLPADAMLRDVILRIREDE 187


>gi|148550731|ref|YP_001260170.1| alternative oxidase [Sphingomonas wittichii RW1]
 gi|402825917|ref|ZP_10875159.1| alternative oxidase [Sphingomonas sp. LH128]
 gi|148503150|gb|ABQ71403.1| Alternative oxidase [Sphingomonas wittichii RW1]
 gi|402260473|gb|EJU10594.1| alternative oxidase [Sphingomonas sp. LH128]
          Length = 229

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/185 (51%), Positives = 126/185 (68%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I++  HHK     DK A    + L++    FF +R+   A++LETV AVPGMVG  + H 
Sbjct: 6   IDLGVHHKASGLSDKVALGFTKVLRWCADTFFAQRYGHRAVVLETVAAVPGMVGATINHL 65

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
             LR+     GWIK L++EAENERMHLMTFIE+++P W+ERA++  VQ VF+  +F  YL
Sbjct: 66  ACLRRMCDDKGWIKTLMDEAENERMHLMTFIEISKPTWFERAVIIGVQWVFYVFFFALYL 125

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S K AHR+VGY EEEAV SYT +L +++ G   N PAP IA  YW LP ++TLRDVV+V
Sbjct: 126 LSAKTAHRVVGYFEEEAVISYTHYLAEIDEGRSANVPAPEIAKRYWGLPEEATLRDVVLV 185

Query: 191 IRADE 195
           +RADE
Sbjct: 186 VRADE 190


>gi|395492241|ref|ZP_10423820.1| alternative oxidase [Sphingomonas sp. PAMC 26617]
          Length = 228

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/185 (51%), Positives = 128/185 (69%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I+++ HH P    D+FA    + L+F    FF +R+   A++LETV AVPGMVG  L H 
Sbjct: 7   IDLSIHHPPHGGSDRFALAATRLLRFIADTFFAKRYGHRAIVLETVAAVPGMVGATLTHL 66

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           + LR+ +   GWI+ L+EEAENERMHLMTF+E+ +P  +ER +V  VQ +F+  +F  YL
Sbjct: 67  RCLRQMKPDRGWIRILMEEAENERMHLMTFLEVCKPTLFERLVVLVVQWLFYLGFFALYL 126

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            SPK AHR+VGY EEEAV SYT +L +++ G   N PAPAIA  YW L  ++TLRDV++V
Sbjct: 127 LSPKTAHRLVGYFEEEAVISYTHYLAEIDAGRSANVPAPAIARRYWGLSDNATLRDVILV 186

Query: 191 IRADE 195
           +RADE
Sbjct: 187 VRADE 191


>gi|163803376|ref|ZP_02197252.1| hypothetical protein 1103602000422_AND4_18992 [Vibrio sp. AND4]
 gi|159172838|gb|EDP57680.1| hypothetical protein AND4_18992 [Vibrio sp. AND4]
          Length = 211

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 124/180 (68%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H K     +  A    + LKF  ++F+ +++   A++LET+ AVPGMV GM  H K+LR+
Sbjct: 8   HKKASKLSEYIALRITRLLKFTLNIFYGKKYAKRAVILETIAAVPGMVAGMFNHLKALRR 67

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            +   GWI+ LL+EAENERMHLM F+++A+P + ER LV   QG F   Y L YL S K+
Sbjct: 68  MKDDEGWIRELLDEAENERMHLMIFLDIAKPSFVERLLVLLGQGAFILVYSLIYLLSSKI 127

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR+VGY EEEA NSYTE+L+ +++G  EN PAP +AI Y++LP D+ LRDV++ IR DE
Sbjct: 128 AHRVVGYFEEEACNSYTEYLEKIDSGEVENVPAPTLAIGYYKLPADAMLRDVILRIREDE 187


>gi|404252627|ref|ZP_10956595.1| alternative oxidase [Sphingomonas sp. PAMC 26621]
          Length = 228

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 94/185 (50%), Positives = 128/185 (69%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           I+++ HH P    D+FA    + L+F    FF +R+   A++LETV AVPGMVG  L H 
Sbjct: 7   IDLSIHHPPHGGSDRFALAATRLLRFIADTFFAKRYGHRAIVLETVAAVPGMVGATLTHL 66

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           + LR+ +   GWI+ L+EEAENERMHLMTF+E+ +P  +ER +V  VQ +F+  +F  YL
Sbjct: 67  RCLRQMKPDRGWIRILMEEAENERMHLMTFLEVCKPTLFERLVVLVVQWLFYLGFFALYL 126

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            SPK AHR+VGY EEEAV SY+ +L +++ G   N PAPAIA  YW L  ++TLRDV++V
Sbjct: 127 LSPKTAHRLVGYFEEEAVISYSHYLAEIDAGRSANVPAPAIARRYWGLSDNATLRDVILV 186

Query: 191 IRADE 195
           +RADE
Sbjct: 187 VRADE 191


>gi|388455982|ref|ZP_10138277.1| oxidase [Fluoribacter dumoffii Tex-KL]
          Length = 220

 Score =  191 bits (486), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 126/180 (70%), Gaps = 1/180 (0%)

Query: 17  HKP-ENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           HKP +   DK AY  V+  +F    FFQ+R+   A++LETV AVPGMVG  LLH + LRK
Sbjct: 5   HKPAKTISDKIAYGLVKFFRFFADTFFQKRYGNRAIVLETVAAVPGMVGAALLHLRCLRK 64

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            ++  GWIK LLEEAENERMHL+TF+ +A+P W+ER ++F  Q +F   Y + Y+ S K 
Sbjct: 65  IKNDEGWIKTLLEEAENERMHLITFMYIAKPNWFERFIIFVAQALFVVLYLVMYVLSSKT 124

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR VGYLEEEAV SYT +L++L+ G  EN+PAP IA  YW L  D+ LR+V++ +R DE
Sbjct: 125 AHRFVGYLEEEAVISYTHYLQELDEGRIENSPAPDIAKIYWGLASDARLREVLLAVRLDE 184


>gi|328875297|gb|EGG23662.1| hypothetical protein DFA_05796 [Dictyostelium fasciculatum]
          Length = 363

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 126/179 (70%), Gaps = 1/179 (0%)

Query: 17  HKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKF 76
           ++P+ + D FA + V++L+  +++FF+ +++ +A LLETV AVPGM GGML H  SLR  
Sbjct: 146 YEPKTFGDHFARYAVKSLRLLSNMFFKEKYIHYACLLETVAAVPGMAGGMLQHLHSLRTC 205

Query: 77  EHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLA 136
           + +   IK LL+EAENERMHLMTFIE+ +P + ER L+   Q  +   Y + YL SPK A
Sbjct: 206 Q-NNYVIKTLLDEAENERMHLMTFIEITKPTFGERVLIALAQAAYLVDYTILYLVSPKTA 264

Query: 137 HRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           HR VG+LEEEAV +YT  L+DL+ G  EN  APAIA  YW LP D+ LRDV++VIR DE
Sbjct: 265 HRFVGFLEEEAVLTYTNMLRDLDAGLVENVNAPAIAKAYWGLPEDAKLRDVIMVIRQDE 323


>gi|330790443|ref|XP_003283306.1| hypothetical protein DICPUDRAFT_74305 [Dictyostelium purpureum]
 gi|325086731|gb|EGC40116.1| hypothetical protein DICPUDRAFT_74305 [Dictyostelium purpureum]
          Length = 348

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/181 (49%), Positives = 126/181 (69%), Gaps = 1/181 (0%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           K ++P+   D FAY+TV  LK  + + F  +H+  A++LE++ +VPG+ GG++LH ++LR
Sbjct: 79  KFYEPKTIGDHFAYYTVIGLKKFSEIMFTNKHINFAIVLESIASVPGLCGGVILHLRALR 138

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
             E S  WIK L++EAENER+HLM FIEL +   +ER LV   Q + +  YF+ Y+ SPK
Sbjct: 139 TME-SCSWIKTLMDEAENERIHLMVFIELTKATLFERILVTMAQFIVWFLYFIGYIISPK 197

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
             HRIV YLE EAV +YT F+KD++ G  EN PA  +AI+YW L  D+TLRD+++VIR D
Sbjct: 198 TMHRIVSYLEYEAVKTYTNFIKDIDLGLIENVPASKLAIEYWGLDNDATLRDMILVIRQD 257

Query: 195 E 195
           E
Sbjct: 258 E 258


>gi|449081284|sp|Q8NKE2.2|AOX_CRYNH RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|405117524|gb|AFR92299.1| alternative oxidase [Cryptococcus neoformans var. grubii H99]
          Length = 401

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 3/168 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           +  L+    L   ++ +   +LLE++  VPGMVGG L H +S+R  +  GGWI +LLEEA
Sbjct: 168 IAELRSKGKLLSDQKWLFRIILLESIAGVPGMVGGTLRHLRSMRLLKRDGGWIHSLLEEA 227

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           ENERMHL+TF+ +A+P  + RALV A QGVF+NA+FL YL SP++AHR VG LEEEAV +
Sbjct: 228 ENERMHLLTFMTIAQPGIFTRALVLAAQGVFYNAFFLTYLISPRIAHRFVGALEEEAVRT 287

Query: 151 YTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           YT  + D+E G    +++ PAPAIAIDYWRLP  S+L DV+  +RADE
Sbjct: 288 YTHCISDMEAGLIPEWKDMPAPAIAIDYWRLPASSSLLDVIRAVRADE 335


>gi|58258419|ref|XP_566622.1| alternative oxidase 1 [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134106269|ref|XP_778145.1| hypothetical protein CNBA1450 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260848|gb|EAL23498.1| hypothetical protein CNBA1450 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57222759|gb|AAW40803.1| alternative oxidase 1 [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 401

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 3/168 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           +  L+    L   ++ +   +LLE++  VPGMVGG L H +S+R  +  GGWI +LLEEA
Sbjct: 168 IAELRSKGKLLSDQKWLFRIILLESIAGVPGMVGGTLRHLRSMRLLKRDGGWIHSLLEEA 227

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           ENERMHL+TF+ +A+P  + RALV A QGVF+NA+FL YL SP++AHR VG LEEEAV +
Sbjct: 228 ENERMHLLTFMTIAQPGIFTRALVLAAQGVFYNAFFLTYLISPRIAHRFVGALEEEAVRT 287

Query: 151 YTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           YT  + D+E G    +++ PAPAIAIDYWRLP  S+L DV+  +RADE
Sbjct: 288 YTHCISDMEAGLIPEWKDMPAPAIAIDYWRLPASSSLLDVIRAVRADE 335


>gi|20467245|gb|AAM22475.1|AF502293_1 alternative oxidase [Cryptococcus neoformans var. grubii]
          Length = 401

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 3/168 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           +  L+    L   ++ +   +LLE++  VPGMVGG L H +S+R  +  GGWI +LLEEA
Sbjct: 168 IAELRSKGKLLSDQKWLFRIILLESIAGVPGMVGGTLRHLRSMRLLKRDGGWIHSLLEEA 227

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           ENERMHL+TF+ +A+P  + RALV A QGVF+NA+FL YL SP++AHR VG LEEEAV +
Sbjct: 228 ENERMHLLTFMTIAQPGIFTRALVLAAQGVFYNAFFLTYLISPRIAHRFVGALEEEAVRT 287

Query: 151 YTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           YT  + D+E G    +++ PAPAIAIDYWRLP  S+L DV+  +RADE
Sbjct: 288 YTHCISDMEAGLIPEWKDMPAPAIAIDYWRLPASSSLLDVIRAVRADE 335


>gi|321251112|ref|XP_003191963.1| alternative oxidase 1 [Cryptococcus gattii WM276]
 gi|317458431|gb|ADV20176.1| Alternative oxidase 1 [Cryptococcus gattii WM276]
          Length = 400

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 3/168 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           +  L+    L   ++ +   +LLE++  VPGMVGG L H +S+R  +  GGWI +LLEEA
Sbjct: 167 IAELRSKGKLLSDQKWLFRIILLESIAGVPGMVGGTLRHLRSMRLLKRDGGWIHSLLEEA 226

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           ENERMHL+TF+ +A+P  + RALV A QGVF+NA+FL YL SP++AHR VG LEEEAV +
Sbjct: 227 ENERMHLLTFMTIAQPSIFTRALVLAAQGVFYNAFFLTYLISPRIAHRFVGALEEEAVRT 286

Query: 151 YTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           YT  + D+E G    +++ PAPAIAIDYWRLP  S+L DV+  +RADE
Sbjct: 287 YTHCISDMEAGLIPEWKDMPAPAIAIDYWRLPATSSLLDVIRAVRADE 334


>gi|328875293|gb|EGG23658.1| alternative oxidase [Dictyostelium fasciculatum]
          Length = 392

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 1/179 (0%)

Query: 17  HKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKF 76
           ++P+ + D FA + V++L+  +++FF+ +++ +A LLETV AVPGM GGML H  SLR  
Sbjct: 174 YEPKTFGDHFARYAVKSLRLLSNMFFKEKYIHYACLLETVAAVPGMAGGMLQHLHSLRTC 233

Query: 77  EHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLA 136
           ++    IK LL+EAENERMHLMTFIE+ +P   ERAL+   Q  +   Y + YL SPK A
Sbjct: 234 KNIY-VIKTLLDEAENERMHLMTFIEITKPTVGERALIALAQAAYLVDYMILYLVSPKTA 292

Query: 137 HRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           HR VG+LEEEAV +YT  L+DL+ G  EN  APAIA  YW LP D+ LRDV++VIR DE
Sbjct: 293 HRFVGFLEEEAVLTYTNMLRDLDAGLVENVNAPAIAKAYWGLPEDAKLRDVIMVIRQDE 351


>gi|84386378|ref|ZP_00989406.1| alternative oxidase [Vibrio splendidus 12B01]
 gi|84378802|gb|EAP95657.1| alternative oxidase [Vibrio splendidus 12B01]
          Length = 210

 Score =  188 bits (478), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 121/182 (66%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSL 73
           + H+KPE + +K A    + LK   +LF+ +     AMLLET+ AVPGMV G+  H K+L
Sbjct: 5   STHYKPEIFSEKVALLVTRLLKKTLNLFYGKHLAKRAMLLETIAAVPGMVAGVFNHLKAL 64

Query: 74  RKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASP 133
           R+ +  GGWIK LL+EA+NERMHLM F+ +  P   ER LV  +Q +F   Y + YL S 
Sbjct: 65  RRMKDDGGWIKELLDEADNERMHLMIFLTVTNPSIIERILVMLLQFIFLLIYGVIYLVSS 124

Query: 134 KLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRA 193
           K AHRIVGY EEEA NSY+E++  +++G+  N PAP IAI Y+RLP ++T  DV+  IR 
Sbjct: 125 KTAHRIVGYFEEEACNSYSEYISKIQDGTLPNHPAPEIAIKYYRLPENATFLDVLFCIRE 184

Query: 194 DE 195
           DE
Sbjct: 185 DE 186


>gi|312885255|ref|ZP_07744933.1| alternative oxidase 1 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367114|gb|EFP94688.1| alternative oxidase 1 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 210

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/181 (50%), Positives = 120/181 (66%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH+ P +  +K A    + LK   +LF+  ++   AMLLET+ AVPGMV G+  H K+LR
Sbjct: 6   KHYTPNSGSEKIALLVTKLLKKTLNLFYGGKYARRAMLLETIAAVPGMVAGVFNHLKALR 65

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           + +  GGWIK LL+EA+NERMHLM F+ + +P   ERALV  +Q  F   Y   YL S K
Sbjct: 66  RMKDDGGWIKELLDEADNERMHLMIFLRITQPSIIERALVMLIQFFFVLIYSFVYLLSSK 125

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
            AHRIVGY EEEA NSY EF++ + +G+ EN+PAPAIAI Y+ L  D+ L DV+  IR D
Sbjct: 126 TAHRIVGYFEEEACNSYCEFIEKILDGTVENSPAPAIAIRYYSLQDDAKLLDVLECIRDD 185

Query: 195 E 195
           E
Sbjct: 186 E 186


>gi|148981866|ref|ZP_01816551.1| alternative oxidase [Vibrionales bacterium SWAT-3]
 gi|145960717|gb|EDK26058.1| alternative oxidase [Vibrionales bacterium SWAT-3]
          Length = 210

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 120/182 (65%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSL 73
           + H+KPE + +K A    + LK   +LF+ +     AMLLET+ AVPGMV G+  H K+L
Sbjct: 5   STHYKPEIFSEKVALLVTRLLKKTLNLFYGKHLAKRAMLLETIAAVPGMVAGVFNHLKAL 64

Query: 74  RKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASP 133
           R+ +  GGWIK LL+EA+NERMHLM F+ + +P   ER LV  +Q +F   Y + YL S 
Sbjct: 65  RRMKDDGGWIKELLDEADNERMHLMIFLTVTKPSIIERILVMLLQFIFLIIYGVIYLVSS 124

Query: 134 KLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRA 193
           K AHRIVGY EEEA NSY+E++  +E G+  N PAP IAI Y+RLP  +T  DV+  IR 
Sbjct: 125 KTAHRIVGYFEEEACNSYSEYISKIEEGALPNHPAPEIAITYYRLPEGATFLDVLFRIRE 184

Query: 194 DE 195
           DE
Sbjct: 185 DE 186


>gi|66813644|ref|XP_641001.1| hypothetical protein DDB_G0280819 [Dictyostelium discoideum AX4]
 gi|18147009|dbj|BAB82989.1| alternative oxidase [Dictyostelium discoideum]
 gi|60469023|gb|EAL67021.1| hypothetical protein DDB_G0280819 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 86/172 (50%), Positives = 124/172 (72%), Gaps = 1/172 (0%)

Query: 24  DKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWI 83
           D FA ++V  L+  ++LFF+ + + +A++LETV AVPG+V GM LH K+LR  + S  WI
Sbjct: 105 DNFAKFSVLFLRKFSNLFFKEKFLHYAIVLETVAAVPGLVAGMFLHLKTLRNMQ-SNNWI 163

Query: 84  KALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYL 143
           K L++E ENERMHL++F+EL +P   ER +V   Q +++N + + Y+ SPK AHR  GYL
Sbjct: 164 KILMDEMENERMHLLSFMELTKPTLLERGMVAVTQAIYWNLFLVFYVLSPKTAHRFTGYL 223

Query: 144 EEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           EE+AV +YT  L+D+++G   N  AP IAI+YW LP D+TLRD+++VIR DE
Sbjct: 224 EEQAVVTYTHMLEDIDSGKVPNYKAPQIAIEYWGLPEDATLRDLILVIRQDE 275


>gi|428185051|gb|EKX53904.1| hypothetical protein GUITHDRAFT_63810 [Guillardia theta CCMP2712]
          Length = 246

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 130/202 (64%), Gaps = 13/202 (6%)

Query: 7   ADLSIN-VTKHHKP-ENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETV 56
            D  +N V K H+P E++ D+ A+  V+  ++    F         + + +     LETV
Sbjct: 7   TDEEVNGVRKTHRPMEDFVDRLAFSGVKLCRWSFDTFSGFRFGELTESKVISRICFLETV 66

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGM  GML H +SLR+ +   GWI  LLEEAENERMHL+TF++L +P +  R  V A
Sbjct: 67  AAVPGMTAGMLRHLRSLRRMDRDHGWIHTLLEEAENERMHLLTFVKLKKPSYAFRTAVVA 126

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAI 173
            QG+F N +F+AY+ASP+  HR VGYLEEEAV +YT+ + +++NG     +  PAP IAI
Sbjct: 127 TQGIFMNLFFVAYIASPRFCHRFVGYLEEEAVKTYTDIIHEIDNGKLKHWQTQPAPQIAI 186

Query: 174 DYWRLPPDSTLRDVVVVIRADE 195
           DYW L PD+++RD+++ +R DE
Sbjct: 187 DYWHLRPDASMRDLMLAVRMDE 208


>gi|417951248|ref|ZP_12594355.1| hypothetical protein VISP3789_20108 [Vibrio splendidus ATCC 33789]
 gi|342805200|gb|EGU40478.1| hypothetical protein VISP3789_20108 [Vibrio splendidus ATCC 33789]
          Length = 210

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 120/182 (65%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSL 73
           + H++PE   +K A    + LK   +LF+ +     AMLLET+ AVPGMV G+  H K+L
Sbjct: 5   STHYQPEVLSEKVALVVTRLLKKTLNLFYGKHLAKRAMLLETIAAVPGMVAGVFNHLKAL 64

Query: 74  RKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASP 133
           R+ +  GGWIK LL+EA+NERMHLM F+ + +P   ER LV  +Q +F   Y + YLAS 
Sbjct: 65  RRMKDDGGWIKELLDEADNERMHLMIFLTVTKPSIIERILVMLLQFLFLIIYSVIYLASS 124

Query: 134 KLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRA 193
           K AHRIVG+ EEEA NSY+E++  +E G+  N PAP IAI Y+RLP  +T  DV+  IR 
Sbjct: 125 KTAHRIVGFFEEEACNSYSEYISKIEEGALPNHPAPEIAITYYRLPEGATFLDVLFRIRE 184

Query: 194 DE 195
           DE
Sbjct: 185 DE 186


>gi|428185053|gb|EKX53906.1| hypothetical protein GUITHDRAFT_63923 [Guillardia theta CCMP2712]
          Length = 247

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 13/202 (6%)

Query: 7   ADLSIN-VTKHHKP-ENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETV 56
            D  +N V K HKP E   D+ A+  V+  ++    F         + + +     LETV
Sbjct: 7   TDEEVNGVRKTHKPIEGLADRLAFSGVKLCRWSFDTFSGFRFGELTESKVISRICFLETV 66

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGM  GML H +SLR+ +   GWI  LLEEAENERMHL+TF++L +P +  R  V A
Sbjct: 67  AAVPGMTAGMLRHLRSLRRMDRDHGWIHTLLEEAENERMHLLTFVKLKKPSYAFRTAVVA 126

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAI 173
            QG+F N +F+AY+ASP+  HR VGYLEEEAV +YT+ + +++NG     +  PAP IAI
Sbjct: 127 TQGIFMNLFFVAYIASPRFCHRFVGYLEEEAVKTYTDIIHEIDNGKLKHWQTQPAPQIAI 186

Query: 174 DYWRLPPDSTLRDVVVVIRADE 195
           DYW L PD+++RD+++ +R DE
Sbjct: 187 DYWHLRPDASMRDLMLAVRMDE 208


>gi|428185052|gb|EKX53905.1| hypothetical protein GUITHDRAFT_100154 [Guillardia theta CCMP2712]
          Length = 285

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 13/202 (6%)

Query: 7   ADLSIN-VTKHHKP-ENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETV 56
            D  +N V K HKP E   D+ A+  V+  ++    F         + + +     LETV
Sbjct: 45  TDEEVNGVRKTHKPIEGLADRLAFSGVKLCRWSFDTFSGFRFGELTESKVISRICFLETV 104

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGM  GML H +SLR+ +   GWI  LLEEAENERMHL+TF++L +P +  R  V A
Sbjct: 105 AAVPGMTAGMLRHLRSLRRMDRDHGWIHTLLEEAENERMHLLTFVKLKKPSYAFRTAVVA 164

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAI 173
            QG+F N +F+AY+ASP+  HR VGYLEEEAV +YT+ + +++NG     +  PAP IAI
Sbjct: 165 TQGIFMNLFFVAYIASPRFCHRFVGYLEEEAVKTYTDIIHEIDNGKLKHWQTQPAPQIAI 224

Query: 174 DYWRLPPDSTLRDVVVVIRADE 195
           DYW L PD+++RD+++ +R DE
Sbjct: 225 DYWHLRPDASMRDLMLAVRMDE 246


>gi|119713421|gb|ABL97483.1| possible alternative respiratory pathway oxidase [uncultured marine
           bacterium HF130_81H07]
          Length = 213

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 120/183 (65%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           +  H  P +  D FA    + L+      F++R+   A++LETV AVPGMV G++ H +S
Sbjct: 14  IAGHKLPISISDSFALGITKFLRNSADFLFKKRYGHRAVVLETVAAVPGMVAGVVHHLRS 73

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR+ +   G I+ +LEEAENERMHLMTFIE+A+P  +ER L+F  Q  F   Y   Y+  
Sbjct: 74  LRRMQDDNGLIREMLEEAENERMHLMTFIEIAQPSTFERFLIFLAQIGFGTFYTFLYIFF 133

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIR 192
            + AHR++GY EEEAV SYTE+L +++ G  EN  AP IAI+YW L  D++LRDVV+ +R
Sbjct: 134 NRTAHRMIGYFEEEAVVSYTEYLDEIDKGQIENTQAPEIAINYWNLAKDASLRDVVIAVR 193

Query: 193 ADE 195
            DE
Sbjct: 194 NDE 196


>gi|62548351|gb|AAX86821.1| putative alternative oxidase [Actinidia deliciosa]
          Length = 107

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 95/107 (88%)

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGV 120
           GMVGGMLLH +SLRKFEHSGGWIKALLEEAENERMHLMT +EL +P+WYER LV  VQGV
Sbjct: 1   GMVGGMLLHLRSLRKFEHSGGWIKALLEEAENERMHLMTMVELVKPKWYERILVLTVQGV 60

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAP 167
           FFNA+F  YL SPKLAHR+VGYLEEEA++SYTE+LKD+++G  EN P
Sbjct: 61  FFNAFFALYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGKIENVP 107


>gi|428184905|gb|EKX53759.1| hypothetical protein GUITHDRAFT_100729 [Guillardia theta CCMP2712]
          Length = 535

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/191 (48%), Positives = 119/191 (62%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALK--------FPTHLFFQRRHMCHAMLLETVGAVPGMVGGML 67
           H  P++  D  AY  VQ  +        +      + + +  A+ LETV  VPGMVGGML
Sbjct: 139 HVDPKDTADSIAYRAVQTARWMFDTLSGYKIGQLTESKVINRAIFLETVAGVPGMVGGML 198

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H +SLR      GWI  LLEEAENERMHL+TF+ + +P    R  V   QGVF N +F+
Sbjct: 199 RHLRSLRTMTRDHGWIHTLLEEAENERMHLLTFVTIKKPGPIFRWAVLGTQGVFMNLFFV 258

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTL 184
            YL  PK+ HR VGYLEEEAV +YT+ L  +++G   SF NA AP IAIDYW + PD+T+
Sbjct: 259 TYLIYPKICHRFVGYLEEEAVKTYTDILNAIDDGRLSSFRNARAPQIAIDYWHMKPDATM 318

Query: 185 RDVVVVIRADE 195
           RD+ +V+RADE
Sbjct: 319 RDLFLVVRADE 329


>gi|290980396|ref|XP_002672918.1| alternative oxidase [Naegleria gruberi]
 gi|284086498|gb|EFC40174.1| alternative oxidase [Naegleria gruberi]
          Length = 294

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 120/183 (65%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           V + +KP +  DK A   ++ L+   H FF  R++ HA++LETV AVPG+V G   H  S
Sbjct: 91  VKRSYKPVDLTDKTALAIMKFLRVFVHGFFGNRYIHHAVVLETVAAVPGIVAGGWRHFSS 150

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR      G I  L+EEAENERMHL+T++E+ +P + ER LV   Q  F + Y  AY  +
Sbjct: 151 LRLMRRDHGHIGELMEEAENERMHLLTWMEMTKPTFLERLLVVGAQVAFTSFYTGAYFVN 210

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIR 192
           P+  HR+VGYLEEEAV +YTEFL  ++NG   N  AP IA+ YW L PD+T+RDVV+VIR
Sbjct: 211 PRFCHRLVGYLEEEAVGAYTEFLNAIDNGDIPNCKAPEIALKYWNLKPDATMRDVVLVIR 270

Query: 193 ADE 195
            DE
Sbjct: 271 GDE 273


>gi|149925323|ref|ZP_01913587.1| Alternative oxidase [Limnobacter sp. MED105]
 gi|149825440|gb|EDM84648.1| Alternative oxidase [Limnobacter sp. MED105]
          Length = 204

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 92/178 (51%), Positives = 122/178 (68%), Gaps = 1/178 (0%)

Query: 19  PENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEH 78
           P+++ DKFA       ++    FF +R+   A++LETV  VPGMV GM +H KSLRK + 
Sbjct: 10  PKDFSDKFAKSLTMFFRWFADTFFAKRYGHRAVILETVAGVPGMVAGMWIHLKSLRKMKT 69

Query: 79  S-GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
             G  I+ LLEEAENERMHLM FIE+A+P   ER LV   Q VF++ YF+ Y+  PK AH
Sbjct: 70  GYGPTIRTLLEEAENERMHLMIFIEIAKPSVGERLLVLFAQLVFWHFYFILYVFFPKTAH 129

Query: 138 RIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           R+VGY E +AV SYT++L +++ G  EN  AP IAIDY++LP D+ LRDVV+ +R DE
Sbjct: 130 RMVGYFENQAVVSYTDYLAEIDAGRIENIAAPKIAIDYYKLPADAKLRDVVIAVRNDE 187


>gi|115399176|ref|XP_001215177.1| alternative oxidase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
 gi|114192060|gb|EAU33760.1| alternative oxidase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
          Length = 355

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 127/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H + +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 102 HREAKNWSDWVALGTVRMLRWGMDLVTGYRHPPPGKENDVRFRMTEQKWLTRFVFLESVA 161

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 162 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAFNERMHLLTFLKLAEPGWFMRLMVLGA 221

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLENG+   +E   AP IAI 
Sbjct: 222 QGVFFNGFFLSYLVSPRTCHRFVGYLEEEAVITYTRAIKDLENGNLPLWEKKEAPEIAIQ 281

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P    T++D+++ +RADE
Sbjct: 282 YWKMPEGKRTMKDLLLYVRADE 303


>gi|261195168|ref|XP_002623988.1| alternative oxidase [Ajellomyces dermatitidis SLH14081]
 gi|239587860|gb|EEQ70503.1| alternative oxidase [Ajellomyces dermatitidis SLH14081]
 gi|239610651|gb|EEQ87638.1| alternative oxidase [Ajellomyces dermatitidis ER-3]
 gi|327348915|gb|EGE77772.1| alternative oxidase [Ajellomyces dermatitidis ATCC 18188]
          Length = 358

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/205 (46%), Positives = 128/205 (62%), Gaps = 25/205 (12%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH---------------------MCHAMLLE 54
           H + +N+ D  A  TV+AL+  T L    RH                     +   + LE
Sbjct: 102 HREAKNWSDWVALGTVRALRRATDLATGYRHPLAGKQEKEIPEKFQMTERKWIVRFIFLE 161

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           TV  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA P W+ R +V
Sbjct: 162 TVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAEPGWFMRLMV 221

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAI 171
              QGVFFN++F++YL SP+  HR VGYLEEEAV +YT  +KDLE G   ++ N PAP I
Sbjct: 222 LGAQGVFFNSFFISYLISPRTCHRFVGYLEEEAVMTYTHAIKDLEAGKLPNWANQPAPDI 281

Query: 172 AIDYWRLPPDS-TLRDVVVVIRADE 195
           A++YW++P    T+ D++  IRADE
Sbjct: 282 AVEYWKMPEGKRTILDLLYYIRADE 306


>gi|390603194|gb|EIN12586.1| alternative oxidase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 379

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/169 (53%), Positives = 113/169 (66%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           TV+ L+   +L    + +  A+ LET+ AVPGMV   + H  SLR      GWI  LLEE
Sbjct: 147 TVEELRKQNYLMGPDQWLQRAIFLETIAAVPGMVAASIRHLNSLRLMRRDSGWIHTLLEE 206

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L RP  + R LV   QGVF+N +FL+YL +PK+ HR VGYLEEEAV 
Sbjct: 207 AENERMHLMTFMALRRPGLWFRTLVMGAQGVFYNVFFLSYLFAPKVCHRFVGYLEEEAVL 266

Query: 150 SYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  ++D+E G      + PAP+IAIDYWRLP DS L DV+  IR+DE
Sbjct: 267 TYTRCIQDIEAGRLPEWADMPAPSIAIDYWRLPQDSKLLDVIYAIRSDE 315


>gi|170090173|ref|XP_001876309.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649569|gb|EDR13811.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 378

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 87/169 (51%), Positives = 109/169 (64%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           TV  L+   +L   R  +   ++LE++  VPGMV   L H  SLR      GWI   LEE
Sbjct: 143 TVAQLRKAGYLLDDRAWLTRILVLESIAGVPGMVAATLRHLTSLRLMRRDSGWIHTCLEE 202

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L +P    RA+V A QGVF+N +F +YL SP++ HR VGYLEEEAV 
Sbjct: 203 AENERMHLMTFMTLRKPSIILRAIVLAAQGVFYNLFFFSYLISPRICHRFVGYLEEEAVV 262

Query: 150 SYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  + DLE G      N PAP I+IDYWRLPPD+ L DV+  +R+DE
Sbjct: 263 TYTRCIADLEAGRIPEWSNKPAPEISIDYWRLPPDAKLLDVLYAVRSDE 311


>gi|409040019|gb|EKM49507.1| hypothetical protein PHACADRAFT_131107 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 379

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 88/167 (52%), Positives = 110/167 (65%), Gaps = 8/167 (4%)

Query: 32  QALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAE 91
           Q      H + QR      + LET+  VPGMV  +L H +SLR      GWI  LLEEAE
Sbjct: 161 QGYAMTDHQWLQR-----ILFLETIAGVPGMVAAVLRHLRSLRLMRRDAGWIHTLLEEAE 215

Query: 92  NERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSY 151
           NERMHLMTF+ + +P  + RALV   QGVF+NA+FL+YL SP++ HR V YLEEEAV++Y
Sbjct: 216 NERMHLMTFMTIRKPSIFFRALVLGAQGVFYNAFFLSYLISPRICHRFVAYLEEEAVHTY 275

Query: 152 TEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           T  + DLENG     EN PAP IA DYWRL PD+ + DV+  +R+DE
Sbjct: 276 TRCIADLENGRIPEWENFPAPEIAKDYWRLRPDAKMVDVLYAVRSDE 322


>gi|398396918|ref|XP_003851917.1| hypothetical protein MYCGRDRAFT_72918 [Zymoseptoria tritici IPO323]
 gi|339471797|gb|EGP86893.1| hypothetical protein MYCGRDRAFT_72918 [Zymoseptoria tritici IPO323]
          Length = 342

 Score =  179 bits (453), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 88/197 (44%), Positives = 127/197 (64%), Gaps = 14/197 (7%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHL----------FFQRRHMCHAMLLETVGAVPGM 62
           V  H  P+++ D+ A   V+ L++   L             R++M   + LE+V  VPGM
Sbjct: 94  VVAHRNPKDFSDRVALTFVRVLRWGLDLATGYRKGAGNMTARQYMIRNVFLESVAGVPGM 153

Query: 63  VGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
           V GML H  S+R+ +   GWI+ LLEE+ NERMHL+TF+++A P W+ R +V   QGVFF
Sbjct: 154 VAGMLRHLHSMRRMKRDNGWIETLLEESFNERMHLLTFLKMAEPGWFMRVMVLGAQGVFF 213

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLP 179
           NA+F++YL SP+  HR VG+LEEEAV +YT  + D++ G    ++N PAP IA+ YW +P
Sbjct: 214 NAFFISYLLSPRTCHRFVGHLEEEAVLTYTREIADIDAGLLPEWDNLPAPDIAVKYWSMP 273

Query: 180 PDS-TLRDVVVVIRADE 195
             S T+RD+++ IRADE
Sbjct: 274 EGSRTMRDLLLYIRADE 290


>gi|378731675|gb|EHY58134.1| alternative oxidase AlxA [Exophiala dermatitidis NIH/UT8656]
          Length = 349

 Score =  179 bits (453), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 91/197 (46%), Positives = 125/197 (63%), Gaps = 17/197 (8%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH-------------MCHAMLLETVGAVPGM 62
           H +     DK AY  V+ L++ T L    RH             +   + LETV  VPGM
Sbjct: 101 HRETRTLSDKIAYNMVRFLRWGTDLATGYRHDPNKPYIMNERKWLVRFIFLETVAGVPGM 160

Query: 63  VGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
           VGGML H +SLR+ +   GWI+ LLE+A NERMHL+TF+++A P W+ + ++   QGVF 
Sbjct: 161 VGGMLRHFRSLRRMKRDNGWIETLLEDAYNERMHLLTFLKMAEPGWFMKLMIMGAQGVFA 220

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLP 179
           N +FLAYL SPK+ HR VGYLEEEA  +YT  ++DLENG   +++N  AP IA+ YW++P
Sbjct: 221 NGFFLAYLVSPKICHRFVGYLEEEATKTYTYAIEDLENGKLPAWQNLEAPDIAVSYWKMP 280

Query: 180 PD-STLRDVVVVIRADE 195
               T++D++  IRADE
Sbjct: 281 EGHRTMKDLLYYIRADE 297


>gi|225563182|gb|EEH11461.1| alternative oxidase [Ajellomyces capsulatus G186AR]
          Length = 357

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 25/205 (12%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA---------------------MLLE 54
           H + +N+ D  A  TV+ L++ T L    RH                         + LE
Sbjct: 101 HREAKNWSDWVALGTVRFLRWATDLATGYRHAAPGKQGVEVPEQFQMTERKWVIRFIFLE 160

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           TV  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA+P W+ R +V
Sbjct: 161 TVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAQPGWFMRLMV 220

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAI 171
              QGVFFN +F++YL SP+  HR VGYLEEEAV +YT  +KDLE+G   ++ N PAP I
Sbjct: 221 LGAQGVFFNGFFISYLISPRTCHRFVGYLEEEAVMTYTHAIKDLESGKLPNWANQPAPDI 280

Query: 172 AIDYWRLPPDS-TLRDVVVVIRADE 195
           A+ YW++P    T+ D++  IRADE
Sbjct: 281 AVAYWQMPEGKRTILDLLYYIRADE 305


>gi|51701295|sp|Q9Y711.1|AOX_AJECA RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|4768918|gb|AAD29680.1|AF133236_1 alternative oxidase [Ajellomyces capsulatus]
 gi|4768920|gb|AAD29681.1|AF133237_1 alternative oxidase [Ajellomyces capsulatus]
 gi|23452825|gb|AAN33183.1| alternative oxidase [Ajellomyces capsulatus]
          Length = 356

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 25/205 (12%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA---------------------MLLE 54
           H + +N+ D  A  TV+ L++ T L    RH                         + LE
Sbjct: 100 HREAKNWSDWVALGTVRFLRWATDLATGYRHAAPGKQGVEVPEQFQMTERKWVIRFIFLE 159

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           TV  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA+P W+ R +V
Sbjct: 160 TVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAQPGWFMRLMV 219

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAI 171
              QGVFFN +F++YL SP+  HR VGYLEEEAV +YT  +KDLE+G   ++ N PAP I
Sbjct: 220 LGAQGVFFNGFFISYLISPRTCHRFVGYLEEEAVMTYTHAIKDLESGKLPNWANQPAPDI 279

Query: 172 AIDYWRLPPDS-TLRDVVVVIRADE 195
           A+ YW++P    T+ D++  IRADE
Sbjct: 280 AVAYWQMPEGKRTILDLLYYIRADE 304


>gi|325093130|gb|EGC46440.1| alternative oxidase [Ajellomyces capsulatus H88]
          Length = 357

 Score =  178 bits (452), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 25/205 (12%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA---------------------MLLE 54
           H + +N+ D  A  TV+ L++ T L    RH                         + LE
Sbjct: 101 HREAKNWSDWVALGTVRFLRWATDLATGYRHAAPGKQGVEVPEQFQMTERKWVIRFIFLE 160

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           TV  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA+P W+ R +V
Sbjct: 161 TVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAQPGWFMRLMV 220

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAI 171
              QGVFFN +F++YL SP+  HR VGYLEEEAV +YT  +KDLE+G   ++ N PAP I
Sbjct: 221 LGAQGVFFNGFFISYLISPRTCHRFVGYLEEEAVMTYTHAIKDLESGKLPNWANQPAPDI 280

Query: 172 AIDYWRLPPDS-TLRDVVVVIRADE 195
           A+ YW++P    T+ D++  IRADE
Sbjct: 281 AVAYWQMPEGKRTILDLLYYIRADE 305


>gi|449548967|gb|EMD39933.1| hypothetical protein CERSUDRAFT_92418 [Ceriporiopsis subvermispora
           B]
          Length = 343

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 87/169 (51%), Positives = 116/169 (68%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           TVQ L+   +   +R+ +   + LE+V  VPGMV  +L H +SLR     GGWI  LLEE
Sbjct: 115 TVQELREKGYTMDERQWLRRILFLESVAGVPGMVAAVLRHLRSLRLMRRDGGWIHTLLEE 174

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ + +P  + RA+V   QGVF+NA+FL+YL SP   HR V +LEEEAV 
Sbjct: 175 AENERMHLMTFMSIRKPSIWFRAMVLGAQGVFYNAFFLSYLVSPTTCHRFVAHLEEEAVL 234

Query: 150 SYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  +++LE+G    + +APAP IA DYWRLPPD+ L DV+  +R+DE
Sbjct: 235 TYTRCIEELESGRIPEWTDAPAPEIAKDYWRLPPDAKLLDVMYAVRSDE 283


>gi|412992248|emb|CCO19961.1| alternative oxidase [Bathycoccus prasinos]
          Length = 408

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 120/196 (61%), Gaps = 16/196 (8%)

Query: 15  KHHKPENYRD---KFAYWTVQALKFPTHLFFQRRH-------MCHAMLLETVGAVPGMVG 64
           KH  P+  RD    FA W+ +   F T   +           +   + LETV  +PGMV 
Sbjct: 160 KHRPPQGARDYVSMFAVWSARK-GFDTITSYSHEKSLTKDQWLFRFIFLETVAGIPGMVA 218

Query: 65  GMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNA 124
           GML H  SLR   H  GWI  LLEEAENERMHLMTF+ + +P  + RA V A QGVFFNA
Sbjct: 219 GMLRHMNSLRLLRHDNGWIHTLLEEAENERMHLMTFLNMKQPSIFFRAGVLAAQGVFFNA 278

Query: 125 YFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE-----NAPAPAIAIDYWRLP 179
           +F +YL SP+  HR VGYLEEEAV +YT  L D+++G  +        AP +AI+YW++ 
Sbjct: 279 FFFSYLISPRTCHRFVGYLEEEAVRTYTHALNDIDSGGTDARQWAKERAPKLAIEYWKMD 338

Query: 180 PDSTLRDVVVVIRADE 195
            D+T+RDV++ +RADE
Sbjct: 339 EDATIRDVLLAVRADE 354


>gi|429965955|gb|ELA47952.1| hypothetical protein VCUG_00535 [Vavraia culicis 'floridensis']
          Length = 318

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 119/181 (65%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH  P+++ D FA+  V+ L+    L+FQ+ ++   ++LETV A+PGMVGGM  H  SLR
Sbjct: 115 KHFVPQSFSDTFAFLIVKGLRAFADLYFQKDYLRRVVVLETVAAIPGMVGGMFRHLYSLR 174

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
             E +G  IK L+ EAENER HL+TF+ + +P   +R L+   Q +FFN Y + Y  +PK
Sbjct: 175 NLEDNGEAIKKLVLEAENERQHLLTFLAVLKPNILDRMLIRLGQFLFFNGYMVFYFMTPK 234

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
            AHR VGYLEEEAV SY  F +++  G  +N  AP I+ DYW LP ++TL DVV  +RAD
Sbjct: 235 TAHRFVGYLEEEAVRSYDAFEEEILVGHIKNVDAPRISKDYWNLPEEATLVDVVRAVRAD 294

Query: 195 E 195
           E
Sbjct: 295 E 295


>gi|443727462|gb|ELU14203.1| hypothetical protein CAPTEDRAFT_151460 [Capitella teleta]
          Length = 233

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/195 (48%), Positives = 118/195 (60%), Gaps = 19/195 (9%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFF------------QRRHMCHAMLLETVGAVPGMV 63
           H KPE + D FA+  V+     T  FF            +RR +     LETV AVPGMV
Sbjct: 18  HKKPEGFIDNFAFIGVKT----TRTFFDAVSGFNRGERNERRWLTRLCFLETVAAVPGMV 73

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFN 123
             M+ H  S+RK     GWI  LLEEAENERMHLMTF+ L +P W  R +V   QGVF  
Sbjct: 74  AAMVRHLNSIRKMSRDHGWIHTLLEEAENERMHLMTFLLLKQPSWAFRMVVVITQGVFVT 133

Query: 124 AYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN---APAPAIAIDYWRLPP 180
            +  AY+ SPKL HR VGYLEEEAV +YT+ LK++E G+ ++    PA  +AI YW L  
Sbjct: 134 GFSCAYMLSPKLCHRFVGYLEEEAVVTYTKLLKEIETGNMQHWLTQPASQVAIHYWNLAE 193

Query: 181 DSTLRDVVVVIRADE 195
           D+ +RDV++ IRADE
Sbjct: 194 DAKMRDVILAIRADE 208


>gi|301106725|ref|XP_002902445.1| alternative oxidase, mitochondrial precursor [Phytophthora
           infestans T30-4]
 gi|262098319|gb|EEY56371.1| alternative oxidase, mitochondrial precursor [Phytophthora
           infestans T30-4]
          Length = 316

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/149 (57%), Positives = 108/149 (72%), Gaps = 3/149 (2%)

Query: 50  AMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWY 109
            + LE+V  VPGMVGGML H +SLRKF+   GWI  LLEEAENERMHL+ F+ + +P ++
Sbjct: 123 CLFLESVAGVPGMVGGMLRHLRSLRKFKRDYGWIHTLLEEAENERMHLLIFMNIKQPGYF 182

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENA 166
            R LV   QGVFFNA+FL YL SPK  HR VGYLEEEAV +YT  LKD+E+G   +++  
Sbjct: 183 FRTLVLGAQGVFFNAFFLTYLVSPKTCHRFVGYLEEEAVKTYTCLLKDIEDGHLDAWKEK 242

Query: 167 PAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            AP IA  Y++LP D++L D+V  +RADE
Sbjct: 243 KAPLIAQTYYKLPEDASLYDMVKCVRADE 271


>gi|327303204|ref|XP_003236294.1| alternative oxidase [Trichophyton rubrum CBS 118892]
 gi|326461636|gb|EGD87089.1| alternative oxidase [Trichophyton rubrum CBS 118892]
          Length = 357

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/206 (46%), Positives = 125/206 (60%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH-------------------MCHAMLL 53
           +  H + +N+ D  A  TV+ L++ T L    RH                   +   + L
Sbjct: 100 IVAHRETKNWSDWVALGTVRLLRWGTDLATGYRHPKPGEPAPSKHFQMNERKWLIRFVFL 159

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMVGGML H  SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ R +
Sbjct: 160 ETVAGVPGMVGGMLRHLHSLRKMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLM 219

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPA 170
           V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE G   ++ + PAP 
Sbjct: 220 VLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTHAIKDLEAGKLPAWTDLPAPD 279

Query: 171 IAIDYWRLPP-DSTLRDVVVVIRADE 195
           IAI YW +P  +  + D++  IRADE
Sbjct: 280 IAIKYWNMPKGNQKMVDLLYYIRADE 305


>gi|294083747|ref|YP_003550504.1| alternative oxidase [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663319|gb|ADE38420.1| Alternative oxidase [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 200

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 87/182 (47%), Positives = 118/182 (64%), Gaps = 1/182 (0%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           +H  P ++ D+FA       ++    FF +R+   A++LETV  VPGMV GM  H  SLR
Sbjct: 2   QHRAPSDFSDRFALAVTMFFRWFADTFFAKRYGHRAVVLETVAGVPGMVAGMWNHLSSLR 61

Query: 75  KFEHS-GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASP 133
           K +    GWIK LL+EAENERMHLM FIE+A+P   ERA++   Q  F++ YF+ Y+  P
Sbjct: 62  KMKQDEKGWIKTLLDEAENERMHLMIFIEIAKPNALERAIILLAQFFFWHFYFILYVFFP 121

Query: 134 KLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRA 193
           K AHR+VGY EE+AV SYTE+L  +++    N  AP IA DY+ LP  + LRDV++ +R 
Sbjct: 122 KTAHRMVGYFEEQAVISYTEYLDQIDSDKATNIDAPDIAKDYYGLPKTAKLRDVIIAVRQ 181

Query: 194 DE 195
           DE
Sbjct: 182 DE 183


>gi|169858069|ref|XP_001835681.1| mitochondrial alternative oxidase [Coprinopsis cinerea
           okayama7#130]
 gi|116503357|gb|EAU86252.1| mitochondrial alternative oxidase [Coprinopsis cinerea
           okayama7#130]
          Length = 376

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 87/180 (48%), Positives = 117/180 (65%), Gaps = 7/180 (3%)

Query: 19  PENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEH 78
           P NY+D     TVQ L+   ++   +  +   + LE++  VPGMV   L H +SLR    
Sbjct: 144 PPNYKD----LTVQHLRDQGYILDDKGWLRRILFLESIAGVPGMVAATLRHLQSLRLMRR 199

Query: 79  SGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHR 138
             GWI   LEEAENERMHLMTF+ L +P    RA+V   QGVF+N +FL+Y+ SPK  HR
Sbjct: 200 DSGWIHTCLEEAENERMHLMTFMTLRKPSIAFRAMVLGAQGVFYNLFFLSYIFSPKTCHR 259

Query: 139 IVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            VGYLEEEAV +YT+ +K+LE+G    +E  PAP IAIDYWR+ PD+ + D++  +R+DE
Sbjct: 260 FVGYLEEEAVVTYTKCIKELEDGLIPEWEGKPAPEIAIDYWRMSPDAKMIDLLYAVRSDE 319


>gi|350631272|gb|EHA19643.1| alternative oxidase [Aspergillus niger ATCC 1015]
          Length = 351

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H   +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 98  HRDAKNWADWVALGTVRMLRWGMDLVTGYRHPPPGREHEARFKMTEQKWLTRFIFLESVA 157

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 158 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 217

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +K++E GS   +E   AP IA+ 
Sbjct: 218 QGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPVWEKTEAPEIAVQ 277

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P    +++D+++ +RADE
Sbjct: 278 YWKMPEGQRSMKDLLLYVRADE 299


>gi|428180112|gb|EKX48980.1| hypothetical protein GUITHDRAFT_68249 [Guillardia theta CCMP2712]
 gi|428180113|gb|EKX48981.1| hypothetical protein GUITHDRAFT_68214 [Guillardia theta CCMP2712]
          Length = 248

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/191 (47%), Positives = 117/191 (61%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH--------MCHAMLLETVGAVPGMVGGML 67
           H KPE+  D+ A   V+A ++    F   R         +     LETV  VPGM  GML
Sbjct: 18  HKKPEDMVDRVALAAVKAARWSFDTFSGYRFGNLTEGKVINRICFLETVAGVPGMTAGML 77

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H +SLR  +   GWI  LLEEAENERMHL+TF++L RP    RA V   QGVF N +FL
Sbjct: 78  RHLRSLRIMDRDHGWIHTLLEEAENERMHLLTFVKLRRPGPLFRAAVVGTQGVFMNVFFL 137

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTL 184
            YL SP+  HR VGYLEEEAV +YT+ +  +++G     +   AP IAIDYW L P++T+
Sbjct: 138 CYLVSPRFCHRFVGYLEEEAVKTYTDIINAIDDGRLGHWKTQAAPQIAIDYWHLKPEATM 197

Query: 185 RDVVVVIRADE 195
           RD+++ +RADE
Sbjct: 198 RDLMLAVRADE 208


>gi|326471371|gb|EGD95380.1| alternative oxidase [Trichophyton tonsurans CBS 112818]
 gi|326479484|gb|EGE03494.1| alternative oxidase [Trichophyton equinum CBS 127.97]
          Length = 357

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 125/206 (60%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH-------------------MCHAMLL 53
           +  H + +N+ D  A  TV+ L++ T L    RH                   +   + L
Sbjct: 100 IVAHRETKNWSDWVALGTVRLLRWGTDLATGYRHPKAGEPAPSKHFQMNERKWLIRFVFL 159

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMVGGML H  SLRK +   GWI+ LLEEA NERMHL++F++LA P W+ R +
Sbjct: 160 ETVAGVPGMVGGMLRHLHSLRKMKRDNGWIETLLEEAYNERMHLLSFLKLAEPGWFMRLM 219

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPA 170
           V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE G   ++ + PAP 
Sbjct: 220 VLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTHAIKDLEAGKLPAWTDLPAPD 279

Query: 171 IAIDYWRLPP-DSTLRDVVVVIRADE 195
           IAI YW +P  +  + D++  IRADE
Sbjct: 280 IAIKYWNMPKGNQKIVDLLYYIRADE 305


>gi|145243920|ref|XP_001394472.1| alternative oxidase [Aspergillus niger CBS 513.88]
 gi|134079156|emb|CAK40685.1| alternative oxidase aox1-Aspergillus niger
          Length = 351

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H   +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 98  HRDAKNWADWVALGTVRMLRWGMDLVTGYRHPPPGREHEARFKMTEQKWLTRFIFLESVA 157

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 158 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 217

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +K++E GS   +E   AP IA+ 
Sbjct: 218 QGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPVWEKTEAPEIAVQ 277

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P    +++D+++ +RADE
Sbjct: 278 YWKMPEGQRSMKDLLLYVRADE 299


>gi|358367171|dbj|GAA83790.1| alternative oxidase, mitochondrial [Aspergillus kawachii IFO 4308]
          Length = 351

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H   +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 98  HRDAKNWADWVALGTVRMLRWGMDLVTGYRHPPPGREHEARFKMTEQKWLTRFIFLESVA 157

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 158 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 217

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +K++E GS   +E   AP IA+ 
Sbjct: 218 QGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPAWEKTEAPEIAVQ 277

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P    +++D+++ +RADE
Sbjct: 278 YWKMPEGQRSMKDLLLYVRADE 299


>gi|6226552|sp|O74180.2|AOX_ASPNG RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|4521101|dbj|BAA32033.2| alternative oxidase [Aspergillus niger]
 gi|9650909|dbj|BAB03469.1| alternative oxidase [Aspergillus niger]
          Length = 351

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H   +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 98  HRDAKNWADWVALGTVRMLRWGMDLVTGYRHPPPGREHEARFKMTEQKWLTRFIFLESVA 157

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 158 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 217

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +K++E GS   +E   AP IA+ 
Sbjct: 218 QGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPAWEKTEAPEIAVQ 277

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P    +++D+++ +RADE
Sbjct: 278 YWKMPEGQRSMKDLLLYVRADE 299


>gi|317032280|ref|XP_003188816.1| alternative oxidase [Aspergillus niger CBS 513.88]
          Length = 261

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H   +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 8   HRDAKNWADWVALGTVRMLRWGMDLVTGYRHPPPGREHEARFKMTEQKWLTRFIFLESVA 67

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 68  GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 127

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +K++E GS   +E   AP IA+ 
Sbjct: 128 QGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPVWEKTEAPEIAVQ 187

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P    +++D+++ +RADE
Sbjct: 188 YWKMPEGQRSMKDLLLYVRADE 209


>gi|326427287|gb|EGD72857.1| alternative oxidase [Salpingoeca sp. ATCC 50818]
          Length = 319

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 89/191 (46%), Positives = 122/191 (63%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFF--------QRRHMCHAMLLETVGAVPGMVGGML 67
           H  P++  D+ AY+ ++ ++    +F         + + +   + LETV  +PGMV G L
Sbjct: 104 HIDPKDRHDRVAYYLIRMIRRGFDIFSGYAFGPINEHKFLRRVIFLETVAGIPGMVAGSL 163

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H KSLR  +   GWI  LLEEAENERMHL+TF++L  P    R +V A QGVF+N YFL
Sbjct: 164 RHLKSLRLMKRDHGWIHTLLEEAENERMHLLTFMQLREPGLLFRGMVLAAQGVFWNLYFL 223

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTL 184
            YLASP+  HR VGYLEEEAV +YT+ +K L++G   ++ N PAP IA  YW L  D+ +
Sbjct: 224 GYLASPRTCHRFVGYLEEEAVKTYTDAIKALDDGLMPTWTNKPAPDIAKTYWGLADDALM 283

Query: 185 RDVVVVIRADE 195
           RDV++ +RADE
Sbjct: 284 RDVLLAVRADE 294


>gi|145350126|ref|XP_001419468.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145357496|ref|XP_001422954.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579700|gb|ABO97761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583198|gb|ABP01313.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 221

 Score =  176 bits (446), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/193 (47%), Positives = 116/193 (60%), Gaps = 13/193 (6%)

Query: 16  HHKPENYRDKFAYWTVQALKF---------PTHLFFQRRHMCHAMLLETVGAVPGMVGGM 66
           H +P + RD  AY  VQ  ++         P         +   + LETV  VPGMVG M
Sbjct: 16  HRQPRHVRDYLAYGLVQFSRWSFDKVTGYTPKKSLTTDGWLMRFIFLETVAGVPGMVGAM 75

Query: 67  LLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
           L H  SLR  +   GWI  LLEEAENERMHL+TF++L  P    R  V   QGVFFNA+F
Sbjct: 76  LRHMMSLRTLKRDHGWIHTLLEEAENERMHLLTFLKLREPGLMFRLAVLGAQGVFFNAFF 135

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GSFENAPAPAIAIDYWRLPPDS 182
           L+YL SP+  HR VGYLEEEAV +YT  L D++       +   PAP +AI YWR+P D+
Sbjct: 136 LSYLISPRTCHRFVGYLEEEAVRTYTHALHDIDGDGPASEWATMPAPKLAIKYWRMPDDA 195

Query: 183 TLRDVVVVIRADE 195
           T+RD+++ +RADE
Sbjct: 196 TVRDLIIAVRADE 208


>gi|378548285|sp|D5JAJ1.1|AOX_TRAHO RecName: Full=Ubiquinol oxidase; AltName: Full=Alternative oxidase
 gi|293338884|gb|ADE43749.1| alternative oxidase [Trachipleistophora hominis]
 gi|440492337|gb|ELQ74912.1| putative Alternative oxidase domain (AOX) protein
           [Trachipleistophora hominis]
          Length = 318

 Score =  176 bits (445), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 118/181 (65%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLR 74
           KH  P+++ D FAY  V+ L+    L+FQ+ ++   ++LETV A+PGMVGGM  H  SLR
Sbjct: 115 KHFVPQSFSDTFAYLIVKGLRAFADLYFQKDYVRRVVVLETVAAIPGMVGGMFRHLYSLR 174

Query: 75  KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
             E +G  IK L+ EAENER HL+TF+ + +P   +R L+   Q +FFN Y + Y  +P+
Sbjct: 175 NLEDNGEAIKKLVLEAENERQHLLTFLAVLKPNVLDRMLIKLGQFLFFNGYMVFYFVAPR 234

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRAD 194
            AHR VGYLEEEAV SY  F +++  G  +N  AP I+ DYW LP ++ L DVV  +RAD
Sbjct: 235 TAHRFVGYLEEEAVRSYDAFEEEILLGHIKNVEAPRISKDYWNLPEEAMLIDVVRAVRAD 294

Query: 195 E 195
           E
Sbjct: 295 E 295


>gi|302847293|ref|XP_002955181.1| alternative oxidase [Volvox carteri f. nagariensis]
 gi|300259473|gb|EFJ43700.1| alternative oxidase [Volvox carteri f. nagariensis]
          Length = 219

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 104/146 (71%), Gaps = 1/146 (0%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LETV  VPGMV GML H KSLR      GWI  LLEEAENERMHL+TF+EL RP    
Sbjct: 45  IFLETVAGVPGMVAGMLRHLKSLRTMRRDHGWIHTLLEEAENERMHLITFLELRRPGPLF 104

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-ENAPAP 169
           RA V   QGVFFNAYFLAYL SP+  H  +G+LEEEAV +YT  L +++ G   +  PAP
Sbjct: 105 RAAVIGAQGVFFNAYFLAYLLSPRTCHAFIGFLEEEAVKTYTHALAEIDAGRLWKGTPAP 164

Query: 170 AIAIDYWRLPPDSTLRDVVVVIRADE 195
           AIA++YW LP  +T+RD+V+ +RADE
Sbjct: 165 AIAVEYWGLPRGATMRDLVLAVRADE 190


>gi|296813341|ref|XP_002847008.1| alternative oxidase [Arthroderma otae CBS 113480]
 gi|238842264|gb|EEQ31926.1| alternative oxidase [Arthroderma otae CBS 113480]
          Length = 358

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 94/206 (45%), Positives = 125/206 (60%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHL-------------------FFQRRHMCHAMLL 53
           +  H + +N+ D  A  TV+ L++ T L                     +R+ +   + L
Sbjct: 101 IVAHRETKNWSDWVALGTVRLLRWGTDLATGYKHPKPGEAAPSKHFQMNERKWLIRFVFL 160

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMVGGML H  SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ R +
Sbjct: 161 ETVAGVPGMVGGMLRHLHSLRKMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLM 220

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPA 170
           V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE G   ++ + PAP 
Sbjct: 221 VLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTHAIKDLEAGKLPAWSDLPAPD 280

Query: 171 IAIDYWRLPPD-STLRDVVVVIRADE 195
           IAI YW +P     + D++  +RADE
Sbjct: 281 IAIKYWNMPEGHQKMLDLLYYVRADE 306


>gi|225681058|gb|EEH19342.1| alternative oxidase [Paracoccidioides brasiliensis Pb03]
          Length = 352

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 124/204 (60%), Gaps = 21/204 (10%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH-----------------MCHAMLLET 55
           V  H   E + D  A  TV+ L++ T L    +H                 +   + LET
Sbjct: 97  VIAHRNAETWSDWVALGTVRMLRWATDLATGYKHPGKSDQNEQFVMTEKKWIIRFIFLET 156

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA+P W+ R +V 
Sbjct: 157 VAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAKPGWFMRLMVL 216

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIA 172
             QGVFFN++F+AYL SP+  HR VGYLEEEAV +YT  + DLE G    + N  AP IA
Sbjct: 217 GAQGVFFNSFFMAYLISPRTCHRFVGYLEEEAVMTYTHAINDLEAGKLPEWANKEAPDIA 276

Query: 173 IDYWRLPPDS-TLRDVVVVIRADE 195
           + YW +P +  T+ D++  IRADE
Sbjct: 277 VAYWHMPENKRTILDLLYYIRADE 300


>gi|154281621|ref|XP_001541623.1| alternative oxidase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150411802|gb|EDN07190.1| alternative oxidase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 357

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 126/205 (61%), Gaps = 25/205 (12%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA---------------------MLLE 54
           H + +N+ D  A  TV+ L++ T L    RH                         + LE
Sbjct: 101 HREAKNWSDWVALGTVRFLRWATDLATGYRHAAPGKQGVEVPEQFQMTERKWVIRFIFLE 160

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           TV  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA+P W+ R +V
Sbjct: 161 TVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAQPGWFMRLMV 220

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAI 171
              QGVFFN +F++YL SP+  HR VGYLEEEAV +YT  +KDLE+G   ++ N  AP I
Sbjct: 221 LGAQGVFFNGFFISYLISPRTCHRFVGYLEEEAVMTYTHAIKDLESGKLPNWANQAAPDI 280

Query: 172 AIDYWRLPPDS-TLRDVVVVIRADE 195
           A+ YW++P    T+ D++  IRADE
Sbjct: 281 AVAYWQMPEGKRTILDLLYYIRADE 305


>gi|121710154|ref|XP_001272693.1| alternative oxidase AlxA, putative [Aspergillus clavatus NRRL 1]
 gi|119400843|gb|EAW11267.1| alternative oxidase AlxA, putative [Aspergillus clavatus NRRL 1]
          Length = 357

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +++ +   + LE+V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++
Sbjct: 149 EQKWLTRFIFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLK 208

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           LA P W+ R +V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  LKDLE G 
Sbjct: 209 LAEPGWFMRLMVLGAQGVFFNGFFLSYLVSPRTCHRFVGYLEEEAVITYTRALKDLETGK 268

Query: 162 --SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IA+ YW +P    T++D+++ IRADE
Sbjct: 269 LPDWEKLEAPEIAVQYWNMPEGHRTMKDLLLYIRADE 305


>gi|302509494|ref|XP_003016707.1| hypothetical protein ARB_04999 [Arthroderma benhamiae CBS 112371]
 gi|291180277|gb|EFE36062.1| hypothetical protein ARB_04999 [Arthroderma benhamiae CBS 112371]
          Length = 357

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 125/206 (60%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH-------------------MCHAMLL 53
           +  H + +++ D  A  TV+ L++ T L    RH                   +   + L
Sbjct: 100 IVAHRETKSWSDWVALGTVRLLRWGTDLATGYRHPKAGEPAPPKHFQMNERKWLIRFVFL 159

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMVGGML H  SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ R +
Sbjct: 160 ETVAGVPGMVGGMLRHLHSLRKMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLM 219

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPA 170
           V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE G   ++ + PAP 
Sbjct: 220 VLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTHAIKDLEAGKLPAWTDLPAPD 279

Query: 171 IAIDYWRLPP-DSTLRDVVVVIRADE 195
           IAI YW +P  +  + D++  IRADE
Sbjct: 280 IAIKYWNMPKGNQKMVDLLYYIRADE 305


>gi|226292243|gb|EEH47663.1| alternative oxidase [Paracoccidioides brasiliensis Pb18]
          Length = 352

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 125/204 (61%), Gaps = 21/204 (10%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHL-----------------FFQRRHMCHAMLLET 55
           V  H   E + D  A  TV+ L++ T L                   +++ +   + LET
Sbjct: 97  VIAHRNAETWSDWVALGTVRMLRWATDLATGYNHPGKSDQNEQFVMTEKKWIIRFIFLET 156

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA+P W+ R +V 
Sbjct: 157 VAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAKPGWFMRLMVL 216

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIA 172
             QGVFFN++F+AYL SP+  HR VGYLEEEAV +YT  + DLE G    + N  AP IA
Sbjct: 217 GAQGVFFNSFFMAYLISPRTCHRFVGYLEEEAVMTYTHAINDLEAGKLPEWANKEAPDIA 276

Query: 173 IDYWRLPPDS-TLRDVVVVIRADE 195
           + YW +P +  T+ D++  IRADE
Sbjct: 277 VAYWHMPENKRTILDLLYYIRADE 300


>gi|315050338|ref|XP_003174543.1| alternative oxidase [Arthroderma gypseum CBS 118893]
 gi|311339858|gb|EFQ99060.1| alternative oxidase [Arthroderma gypseum CBS 118893]
          Length = 358

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/206 (45%), Positives = 125/206 (60%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH-------------------MCHAMLL 53
           +  H + +++ D  A  TV+ L++ T L    RH                   +   + L
Sbjct: 101 IVAHRETKDWSDWVALGTVRLLRWGTDLATGYRHPKAGEPVPSGHFQMNERKWLIRFVFL 160

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMVGGML H  SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ R +
Sbjct: 161 ETVAGVPGMVGGMLRHLHSLRKMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLM 220

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPA 170
           V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE+G   +++  PAP 
Sbjct: 221 VLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTHAIKDLEDGKLPAWKELPAPD 280

Query: 171 IAIDYWRLPPD-STLRDVVVVIRADE 195
           IAI YW +P     + D++  +RADE
Sbjct: 281 IAIKYWNMPEGHQKMVDLLYYVRADE 306


>gi|409079050|gb|EKM79412.1| AOX alternative oxidase mitochondrial [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 375

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/152 (53%), Positives = 102/152 (67%), Gaps = 3/152 (1%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPGMV   L H  SLR     GGWI   LEEAENERMHLMTF+ L +P
Sbjct: 156 LSRILFLESIAGVPGMVAATLRHLTSLRLMRRDGGWIHTCLEEAENERMHLMTFMSLRKP 215

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF--- 163
             + RALV   QGVF+N +FL+YL SP++ HR VGYLEEEAV +YT  + DLE G     
Sbjct: 216 SIFFRALVLGAQGVFYNLFFLSYLVSPRICHRFVGYLEEEAVYTYTHCIADLEAGRIPEW 275

Query: 164 ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            + PAP IAIDYWRLP ++ L DV+  +R+DE
Sbjct: 276 SDMPAPQIAIDYWRLPKNAKLLDVIYAVRSDE 307


>gi|353244382|emb|CCA75783.1| related to alternative oxidase precursor, mitochondrial
           [Piriformospora indica DSM 11827]
          Length = 449

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/208 (43%), Positives = 119/208 (57%), Gaps = 29/208 (13%)

Query: 17  HKPENYRDKFAYWTVQALKFPTHLFFQRRH--------------------------MCHA 50
           H+PEN RD+ A W V+AL+          H                          +   
Sbjct: 179 HQPENMRDRTASWFVRALRKGYDFVSGYHHKPIPPGSTMSIEELRKGGYILSADQWLNRI 238

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LET+  VPG    M+ H + LR  +  GGWI  LLEEAENERMHLMTF+ L +   + 
Sbjct: 239 LFLETIAGVPGFFAAMIRHLRGLRGMKRDGGWIHTLLEEAENERMHLMTFMTLRQSGIFF 298

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           RA + A QGVF NA+FLAYL SP+  HR VG LEEEA  +YT  ++D+E G    +++ P
Sbjct: 299 RAFIVAAQGVFANAFFLAYLVSPRTCHRFVGSLEEEATLTYTALIEDMEAGRVPEWKDKP 358

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IAIDYWRL P++TL DV+  +R+DE
Sbjct: 359 APGIAIDYWRLKPNATLLDVIYAVRSDE 386


>gi|426195957|gb|EKV45886.1| AOX alternative oxidase mitochondrial precursor [Agaricus bisporus
           var. bisporus H97]
          Length = 356

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/152 (53%), Positives = 102/152 (67%), Gaps = 3/152 (1%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPGMV   L H  SLR     GGWI   LEEAENERMHLMTF+ L +P
Sbjct: 137 LSRILFLESIAGVPGMVAATLRHLTSLRLMRRDGGWIHTCLEEAENERMHLMTFMSLRKP 196

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF--- 163
             + RALV   QGVF+N +FL+YL SP++ HR VGYLEEEAV +YT  + DLE G     
Sbjct: 197 SIFFRALVLGAQGVFYNLFFLSYLVSPRICHRFVGYLEEEAVYTYTHCIADLEAGRIPEW 256

Query: 164 ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            + PAP IAIDYWRLP ++ L DV+  +R+DE
Sbjct: 257 SDMPAPQIAIDYWRLPKNAKLLDVIYAVRSDE 288


>gi|70989575|ref|XP_749637.1| alternative oxidase AlxA [Aspergillus fumigatus Af293]
 gi|66847268|gb|EAL87599.1| alternative oxidase AlxA, putative [Aspergillus fumigatus Af293]
 gi|159129043|gb|EDP54157.1| alternative oxidase AlxA, putative [Aspergillus fumigatus A1163]
          Length = 352

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 122/202 (60%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H + +N+ D  A  TV+ L++        RH                  +   + LE+V 
Sbjct: 99  HREAKNWSDWVALGTVRVLRWGMDFVTGYRHPKPGQEHDAKFRMTEQKWLTRFIFLESVA 158

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 159 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 218

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAID 174
           QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KD+E G    +E   AP IA+ 
Sbjct: 219 QGVFFNGFFLSYLISPRTCHRFVGYLEEEAVITYTRAIKDIETGKLPDWEKLDAPEIAVQ 278

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW +P     +RD+++ +RADE
Sbjct: 279 YWNMPEGQRKMRDLLLYVRADE 300


>gi|392591621|gb|EIW80948.1| alternative oxidase [Coniophora puteana RWD-64-598 SS2]
          Length = 382

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 114/169 (67%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           +++ L+   ++  +R  +   + LE++  VPGMV  ML H  SLR      GWI  LLEE
Sbjct: 154 SLEELQKGGYVLTERAWLSRILFLESIAGVPGMVAAMLRHLGSLRLMRRDSGWIHTLLEE 213

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L +P  + RALV   QGVFFN +FL+Y+ SP++ HR VGYLEEEAV 
Sbjct: 214 AENERMHLMTFMTLKQPSLFFRALVLGAQGVFFNVFFLSYMISPRICHRFVGYLEEEAVV 273

Query: 150 SYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  ++++E G   ++ N PAP IA DYWRL P++ L DV+  +R+DE
Sbjct: 274 TYTRCIEEIEAGRLPAWSNMPAPEIAKDYWRLHPEANLLDVIYAVRSDE 322


>gi|51701294|sp|Q9P959.2|AOX_EMENI RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|259487471|tpe|CBF86176.1| TPA: Alternative oxidase, mitochondrial Precursor (EC 1.-.-.-)
           [Source:UniProtKB/Swiss-Prot;Acc:Q9P959] [Aspergillus
           nidulans FGSC A4]
          Length = 354

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 110/149 (73%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF+++A P W+ 
Sbjct: 154 VFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKMAEPGWFM 213

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAP 167
           R +V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE+G    +E   
Sbjct: 214 RLMVLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTRAIKDLESGRLPHWEKLE 273

Query: 168 APAIAIDYWRLPP-DSTLRDVVVVIRADE 195
           AP IA+ YW++P  + T++D+++ +RADE
Sbjct: 274 APEIAVKYWKMPEGNRTMKDLLLYVRADE 302


>gi|67523285|ref|XP_659703.1| hypothetical protein AN2099.2 [Aspergillus nidulans FGSC A4]
 gi|7415933|dbj|BAA93615.1| mitochondrial alternative oxidase [Emericella nidulans]
 gi|40745775|gb|EAA64931.1| hypothetical protein AN2099.2 [Aspergillus nidulans FGSC A4]
          Length = 351

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 110/149 (73%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF+++A P W+ 
Sbjct: 151 VFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKMAEPGWFM 210

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAP 167
           R +V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE+G    +E   
Sbjct: 211 RLMVLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTRAIKDLESGRLPHWEKLE 270

Query: 168 APAIAIDYWRLPP-DSTLRDVVVVIRADE 195
           AP IA+ YW++P  + T++D+++ +RADE
Sbjct: 271 APEIAVKYWKMPEGNRTMKDLLLYVRADE 299


>gi|301106717|ref|XP_002902441.1| alternative oxidase, mitochondrial precursor [Phytophthora
           infestans T30-4]
 gi|262098315|gb|EEY56367.1| alternative oxidase, mitochondrial precursor [Phytophthora
           infestans T30-4]
          Length = 325

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 119/200 (59%), Gaps = 13/200 (6%)

Query: 9   LSINVTKHHKPENYRDKFAYWTVQALKF----------PTHLFFQRRHMCHAMLLETVGA 58
           +++    HH      ++ AY  ++ L+           P     +R  +   + LE++  
Sbjct: 99  ITVMEETHHPVATMSERVAYLAIKTLRVGFDKVTRYRGPGGEMTERDWLHRCLFLESIAG 158

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGML H +SLR+ +   GWI  LLEEAENERMHL+ F+ L +P W+ R LV   Q
Sbjct: 159 VPGMVGGMLRHLRSLRRMKRDYGWIHTLLEEAENERMHLLIFLHLKQPGWFFRTLVIGAQ 218

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE---NAPAPAIAIDY 175
           GVFFN +FL YL SPK  HR VGYLEEEAV +YT  L+D+E+G  +      AP IA  Y
Sbjct: 219 GVFFNGFFLTYLVSPKTCHRFVGYLEEEAVKTYTYLLQDIEDGHLDGWKQKQAPLIAQTY 278

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           ++LP  S + D++  IRADE
Sbjct: 279 YKLPEGSNIYDMIKCIRADE 298


>gi|403337618|gb|EJY68031.1| Alternative oxidase isoform B [Oxytricha trifallax]
          Length = 278

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 125/200 (62%), Gaps = 11/200 (5%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALK--FPTHLFFQRRHMC------HAMLLETVGA 58
           +D+      H KPE +RDKFA   ++ ++  F     +  + M         + LET+  
Sbjct: 33  SDIEQIAVTHRKPELFRDKFALNLIRFMRTSFDIATGYNEKQMTTQKWLNRVIFLETIAG 92

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGM  H +SLR  +   GWI +LLEEAENER HL  F++L +P    + ++ A Q
Sbjct: 93  VPGMVGGMARHLQSLRSLKPDHGWIHSLLEEAENERTHLFIFLKLKQPTALFKLMIAAAQ 152

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAIDY 175
           G+F+N YF++YL +PK  HR VGYLEEEAV++YT  LK ++NGS       PAP +A +Y
Sbjct: 153 GIFYNLYFISYLLAPKYCHRFVGYLEEEAVHTYTVLLKQIDNGSLPEWAEMPAPQMAREY 212

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           ++L  ++ LRDV++ IRADE
Sbjct: 213 YKLSENAKLRDVILSIRADE 232


>gi|298714367|emb|CBJ27424.1| alternative oxidase isoform A [Ectocarpus siliculosus]
          Length = 422

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 126/208 (60%), Gaps = 14/208 (6%)

Query: 1   PWETYKADLSINVTK--HHKPENYRDKFAYWTVQALK--------FPTHLFFQRRHMCHA 50
           P E + A+  +N  K  H  PE   D  A   V+AL+        F T +  + +++   
Sbjct: 128 PHEIWSAE-EVNSIKPTHKDPEEAVDHIALRGVRALRWFFDVLAGFKTGVIDEHKYLNRV 186

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LETV  +PGMV G L H  SLR+     GWI  LLEEAENERMHL+TF++L +P    
Sbjct: 187 IFLETVAGIPGMVAGTLRHLTSLRRMRRDHGWIHTLLEEAENERMHLLTFLKLKQPGPVF 246

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAP 167
           R  V   QGV +NA+FL+YL SPK  HR VGY+EEEAV++YT  L+D++      F N P
Sbjct: 247 RFAVMISQGVMYNAFFLSYLISPKACHRFVGYIEEEAVHTYTVLLEDIDANKLPLFSNLP 306

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           APA+A  YW+L  D+  RD+V+ +RADE
Sbjct: 307 APAMAKSYWKLGDDAMFRDLVLAVRADE 334


>gi|361131765|gb|EHL03417.1| putative Alternative oxidase, mitochondrial [Glarea lozoyensis
           74030]
          Length = 269

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 126/213 (59%), Gaps = 33/213 (15%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHL---------------------------FFQRRHMC 48
           H KP ++ D+ A + V+ L++ T +                             +R+ + 
Sbjct: 9   HRKPADFSDRVALFMVRMLRWGTDIATGYKHDVESPKKIGDANVMAATKPYSMSERKWLT 68

Query: 49  HAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQW 108
             + LE+V  VPGMV  ML H  S+R+ +   GWI+ LLEE++NERMHL+TF+++A P W
Sbjct: 69  RFVFLESVAGVPGMVAAMLRHLNSMRRLKRDNGWIETLLEESQNERMHLLTFLKMAEPGW 128

Query: 109 YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF----- 163
           + + ++   QGVFFN+ FL+YL SP+  HR VGYLEEEAV +Y+  + DLENG       
Sbjct: 129 FMKLMILGAQGVFFNSMFLSYLVSPRTCHRFVGYLEEEAVLTYSLAISDLENGKLPLWTH 188

Query: 164 ENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
            N   P IA+DYW++P D  T+RD+++ +RADE
Sbjct: 189 PNFKVPDIAVDYWKIPEDKRTMRDLLLYVRADE 221


>gi|119480199|ref|XP_001260128.1| alternative oxidase AlxA, putative [Neosartorya fischeri NRRL 181]
 gi|119408282|gb|EAW18231.1| alternative oxidase AlxA, putative [Neosartorya fischeri NRRL 181]
          Length = 345

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 123/202 (60%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H + +N+ D  A  TV+ L++   L    RH                  +   + LE+V 
Sbjct: 92  HREAKNWSDWVALGTVRVLRWGMDLVTGYRHPKPGQEHDAKFKMTEQKWLTRFVFLESVA 151

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 152 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVLGA 211

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAID 174
           QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KD+E G    +E   AP IA+ 
Sbjct: 212 QGVFFNGFFLSYLISPRTCHRFVGYLEEEAVITYTRAIKDIEAGKLPDWEELDAPEIAVQ 271

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW +P     ++D+++ +RADE
Sbjct: 272 YWNMPEGQRKMKDLLLYVRADE 293


>gi|393212505|gb|EJC98005.1| alternative oxidase [Fomitiporia mediterranea MF3/22]
          Length = 379

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           +V+ L+   ++  +   M   + LET+  +PGM    + H  SLR      GWI  LLEE
Sbjct: 149 SVKELREQGYIMTETGWMNRCLFLETIAGIPGMAAATIRHLHSLRLLRRDAGWIHTLLEE 208

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLM+F+ + +P  + R L+   QGVF+N +F +YL +P++ HR VGYLEEEAV 
Sbjct: 209 AENERMHLMSFLAIRKPGIFMRGLILGAQGVFYNVFFFSYLMAPRVCHRFVGYLEEEAVK 268

Query: 150 SYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  + DLENG F   EN PAP IA DYWRL  ++TL D++  IR+DE
Sbjct: 269 TYTALIADLENGRFPEWENKPAPPIAKDYWRLRDNATLLDMIYAIRSDE 317


>gi|302662223|ref|XP_003022769.1| hypothetical protein TRV_03103 [Trichophyton verrucosum HKI 0517]
 gi|291186732|gb|EFE42151.1| hypothetical protein TRV_03103 [Trichophyton verrucosum HKI 0517]
          Length = 262

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/206 (45%), Positives = 124/206 (60%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH-------------------MCHAMLL 53
           +  H + +++ D  A  TV+ L++ T L    RH                   +   + L
Sbjct: 5   IVAHRETKSWSDWVALGTVRLLRWGTDLATGYRHPKAGEPAPPKHFQMNERKWLIRFVFL 64

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMVGGML H  SLRK +   GWI+ LLEEA NE MHL+TF++LA P W+ R +
Sbjct: 65  ETVAGVPGMVGGMLRHLHSLRKMKRDNGWIETLLEEAYNEHMHLLTFLKLAEPGWFMRLM 124

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPA 170
           V   QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE G   ++ + PAP 
Sbjct: 125 VLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTHAIKDLEAGKLPAWTDLPAPD 184

Query: 171 IAIDYWRLPP-DSTLRDVVVVIRADE 195
           IAI YW +P  +  + D++  IRADE
Sbjct: 185 IAIKYWNMPKGNQKMVDLLYYIRADE 210


>gi|332099427|gb|ABN09948.3| mitochondrial alternative oxidase [Moniliophthora perniciosa]
 gi|342349569|gb|AEL23664.1| mitochondrial alternative oxidase [Moniliophthora perniciosa]
          Length = 378

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 81/169 (47%), Positives = 111/169 (65%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           T+  L+   +L   +  +   + LE++  VPGMV   + H  SLR      GWI   LEE
Sbjct: 141 TLAELRKEGYLLDDKAWLSRILFLESIAGVPGMVAATIRHLTSLRLMRRDNGWIHTCLEE 200

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L +P  + RA++   QGVF+N +FL+Y+ SP++ HR VGYLEEEAV 
Sbjct: 201 AENERMHLMTFMTLRKPSIFFRAMILGAQGVFYNLFFLSYIISPRICHRFVGYLEEEAVL 260

Query: 150 SYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT+ +KD+E G    + + PAP IAIDYWRLP D+ L DV+  +R+DE
Sbjct: 261 TYTKCIKDIEAGYVPEWSDMPAPKIAIDYWRLPADAKLLDVIYAVRSDE 309


>gi|401881329|gb|EJT45629.1| Alternative oxidase [Trichosporon asahii var. asahii CBS 2479]
 gi|406701771|gb|EKD04883.1| Alternative oxidase [Trichosporon asahii var. asahii CBS 8904]
          Length = 400

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 89/168 (52%), Positives = 115/168 (68%), Gaps = 3/168 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           +  L+    L   +  M   +LLE++  VPGMVGG L H +SLR     GGWI  LLEEA
Sbjct: 151 IAELRKSGELLSDKDWMTRIILLESIAGVPGMVGGTLRHLRSLRLLRRDGGWIHTLLEEA 210

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           ENERMHL+TF+ +A+P W+ RALV A QGVF+  +FL YL +PKLAHR VG LEEEAV +
Sbjct: 211 ENERMHLLTFLTVAQPGWFTRALVMAGQGVFYPMFFLTYLVAPKLAHRFVGALEEEAVRT 270

Query: 151 YTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           Y+  + D+E G    + + PAP IAIDYWRL P+++L DV+  +RADE
Sbjct: 271 YSHCINDVEKGFVPEWTDKPAPQIAIDYWRLKPNASLLDVIKAVRADE 318


>gi|443722305|gb|ELU11227.1| hypothetical protein CAPTEDRAFT_227551 [Capitella teleta]
          Length = 337

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 91/201 (45%), Positives = 124/201 (61%), Gaps = 21/201 (10%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALK-------------FPTHLFFQRRHMCHAMLLETVG 57
           +N+T H KP  + D FAY  VQ  +              P++  +  R +C    LETV 
Sbjct: 117 VNIT-HKKPVGFIDNFAYLGVQTTRKVFDFLTGYNRTPSPSNAVWVNR-LC---FLETVA 171

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMV  M+ H +SLR+     GWI  LLEEAENERMHLM F+++ +P    R  V + 
Sbjct: 172 GVPGMVAAMVRHLESLRRMRRDHGWIHTLLEEAENERMHLMVFLQIKQPSLLFRLSVMST 231

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN---APAPAIAID 174
           Q +F + + +AYL SPKL HR VGYLEEEAV +YT+ L+ +E+G  ++    PA  IAI+
Sbjct: 232 QAIFVSGFSIAYLLSPKLCHRFVGYLEEEAVITYTKLLQQIEDGGMQDWKTKPASQIAIN 291

Query: 175 YWRLPPDSTLRDVVVVIRADE 195
           YWRL  ++T++DVV+ IRADE
Sbjct: 292 YWRLSQEATMKDVVLAIRADE 312


>gi|340960109|gb|EGS21290.1| hypothetical protein CTHT_0031430 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 221

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 81/155 (52%), Positives = 108/155 (69%), Gaps = 6/155 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPGMV GML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+ +A+P
Sbjct: 19  LVRLIFLESIAGVPGMVAGMLRHLSSLRRMKRDNGWIETLLEESYNERMHLLTFMRMAQP 78

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG----- 161
            W+ + ++   QGVFFNA FL YL SPK+ HR VGYLEEEAV++YT  L ++E G     
Sbjct: 79  GWFMKTMIILSQGVFFNALFLTYLISPKITHRFVGYLEEEAVHTYTRLLGEIERGDLPKW 138

Query: 162 SFENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           S  N P P IAI+YWRLP    T++D+++ IRADE
Sbjct: 139 SDPNFPVPQIAIEYWRLPEGKRTMKDLIMYIRADE 173


>gi|290997319|ref|XP_002681229.1| alternative oxidase [Naegleria gruberi]
 gi|284094852|gb|EFC48485.1| alternative oxidase [Naegleria gruberi]
          Length = 241

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/184 (49%), Positives = 122/184 (66%)

Query: 12  NVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK 71
            V + + P +  DK A   ++ L+   H FF  R++ HA++LETV AVPG+V G   H  
Sbjct: 36  QVLRSYSPVDLTDKLALGIMKFLRVFVHGFFGNRYLHHAVVLETVAAVPGIVAGGWRHFN 95

Query: 72  SLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLA 131
           SLR      G I  L+EEAENERMHL+T++E+ +P + ER LV   Q  F + Y +AYL 
Sbjct: 96  SLRLMRRDHGHIGELMEEAENERMHLLTWMEMTKPTFLERMLVVGAQVGFTSFYTMAYLL 155

Query: 132 SPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           +P+  HR+VGYLEEEAV +Y+EFL+ ++ G   N  AP IAI YW L P+ST+RDVVVV+
Sbjct: 156 NPRFCHRLVGYLEEEAVAAYSEFLEAIDKGDIPNCKAPEIAIKYWNLKPESTMRDVVVVV 215

Query: 192 RADE 195
           RADE
Sbjct: 216 RADE 219


>gi|303312147|ref|XP_003066085.1| Alternative oxidase, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240105747|gb|EER23940.1| Alternative oxidase, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320040066|gb|EFW22000.1| alternative oxidase [Coccidioides posadasii str. Silveira]
          Length = 360

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LETV AVPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++
Sbjct: 152 ERKWIIRFIFLETVAAVPGMVGGMLRHLRSLRRMKRDLGWIETLLEEAYNERMHLLSFLK 211

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           LA P W+ R +V   QGVFFNA+FL+YL SP+  HR VGYLEEEAV +YT  + DLENG 
Sbjct: 212 LAEPGWFMRLMVLGAQGVFFNAFFLSYLVSPRTCHRFVGYLEEEAVLTYTHAINDLENGK 271

Query: 163 F---ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
               ++  AP IA+ YW++P     + D++  +RADE
Sbjct: 272 LPRWKDMNAPDIAVTYWKMPEGHRKILDLLYYVRADE 308


>gi|443697354|gb|ELT97860.1| hypothetical protein CAPTEDRAFT_122794 [Capitella teleta]
          Length = 305

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 92/201 (45%), Positives = 123/201 (61%), Gaps = 21/201 (10%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALK-------------FPTHLFFQRRHMCHAMLLETVG 57
           +N+T H KP  + D FAY  VQ  +              P++  +  R +C    LETV 
Sbjct: 85  VNIT-HKKPVGFIDNFAYLGVQTTRKVFDFLTGYNRTPSPSNAVWVNR-LC---FLETVA 139

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMV  M+ H +SLRK     GWI  LLEEAENERMHLM F+++ +P    R  V + 
Sbjct: 140 GVPGMVAAMVRHLESLRKMRRDHGWIHTLLEEAENERMHLMVFLQIKQPSLLFRLSVMST 199

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE---NAPAPAIAID 174
           Q +F + + +AYL SPKL HR VGYLEEEAV +YT+ L+ +E+G  +     PA  IAI+
Sbjct: 200 QAIFVSGFSIAYLLSPKLCHRFVGYLEEEAVITYTKLLQQIEDGGMQEWKTKPASQIAIN 259

Query: 175 YWRLPPDSTLRDVVVVIRADE 195
           YWRL  ++T++DVV+ IRADE
Sbjct: 260 YWRLSQEATMKDVVLAIRADE 280


>gi|119193348|ref|XP_001247280.1| alternative oxidase, mitochondrial precursor [Coccidioides immitis
           RS]
 gi|392863474|gb|EAS35773.2| alternative oxidase, mitochondrial [Coccidioides immitis RS]
          Length = 360

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LETV AVPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++
Sbjct: 152 ERKWIIRFIFLETVAAVPGMVGGMLRHLRSLRRMKRDLGWIETLLEEAYNERMHLLSFLK 211

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           LA P W+ R +V   QGVFFNA+FL+YL SP+  HR VGYLEEEAV +YT  + DLENG 
Sbjct: 212 LAEPGWFMRLMVLGAQGVFFNAFFLSYLVSPRTCHRFVGYLEEEAVLTYTHAINDLENGK 271

Query: 163 F---ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
               ++  AP IA+ YW++P     + D++  +RADE
Sbjct: 272 LPRWKDMNAPDIAVTYWKMPEGHRKILDLLYYVRADE 308


>gi|402220460|gb|EJU00531.1| mitochondrial alternative oxidase [Dacryopinax sp. DJM-731 SS1]
          Length = 395

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 103/148 (69%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV   L H +SLR  +  GGWI  LLEEAENERMHLMTF+ + +P    
Sbjct: 173 LFLESIAGVPGMVAATLRHLRSLRLMKRDGGWIHTLLEEAENERMHLMTFMAVKQPSLLF 232

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
           R LV   QGVF+N +FL+YL SPKL HR VG LEEEAV +YT  +K+LE G     +N  
Sbjct: 233 RTLVLGAQGVFYNLFFLSYLISPKLCHRFVGCLEEEAVITYTHAIKELEAGRLPEWDNVQ 292

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IAIDYWRL P++TL DV+  +R+DE
Sbjct: 293 APKIAIDYWRLKPNATLLDVIYAVRSDE 320


>gi|452840505|gb|EME42443.1| hypothetical protein DOTSEDRAFT_175510 [Dothistroma septosporum
           NZE10]
          Length = 342

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 14/194 (7%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHL----------FFQRRHMCHAMLLETVGAVPGMVGG 65
           H + +   DK A   V+ L++   L            +R++M   + LE+V  VPGMV G
Sbjct: 94  HREAKTMSDKVAVGFVRTLRWGLDLASGYTKNSGGMTERKYMIRNIFLESVAGVPGMVAG 153

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           ML H +S+R  +   GW+++LLEE+ NERMHL+TF+++A P W+ R LV   QGVFFNA+
Sbjct: 154 MLRHLRSMRTMKRDNGWMESLLEESYNERMHLLTFLKMAEPGWFMRFLVLGAQGVFFNAF 213

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPD- 181
           F++YL SPK  HR VGYLEEEAV +YT  ++D++ G    +    AP IA+ YW +P   
Sbjct: 214 FVSYLVSPKTCHRFVGYLEEEAVLTYTREIEDIDAGRLPKWSQMEAPEIAVKYWNMPEGH 273

Query: 182 STLRDVVVVIRADE 195
            T+RD+++ IRADE
Sbjct: 274 RTMRDLLLYIRADE 287


>gi|169770083|ref|XP_001819511.1| alternative oxidase [Aspergillus oryzae RIB40]
 gi|83767370|dbj|BAE57509.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391864037|gb|EIT73335.1| alternative oxidase [Aspergillus oryzae 3.042]
          Length = 353

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 113/157 (71%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +++ +   + LE+V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++
Sbjct: 145 EQKWLTRFVFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLK 204

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           LA P W+ R +V   QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  ++D+E+G 
Sbjct: 205 LAEPGWFMRLMVLGAQGVFFNGFFLSYLMSPRICHRFVGYLEEEAVLTYTRAIQDIEHGK 264

Query: 162 --SFENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
              +    AP IA+ YW++P    T++D+++ +RADE
Sbjct: 265 LPKWTKLEAPEIAVQYWKMPEGQRTMKDLLMYVRADE 301


>gi|405968665|gb|EKC33714.1| Alternative oxidase, mitochondrial [Crassostrea gigas]
          Length = 304

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/197 (45%), Positives = 123/197 (62%), Gaps = 12/197 (6%)

Query: 10  SINVTKHHKPENYRDKFAYWTVQALKFPTHLFF--------QRRHMCHAMLLETVGAVPG 61
           S+ VT H  PE + DK A+ +V+ L+    L          +++ +     LETV  VPG
Sbjct: 84  SVKVT-HKPPEGFVDKLAFRSVKLLRSTFDLLTGFNWGERTEKKWVLRICFLETVAGVPG 142

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MV  M  H  SLR+ +   GWI  LLEEAENERMHLMT ++L +P W  R+ V   QG F
Sbjct: 143 MVAAMTRHLHSLRRLKRDHGWIHTLLEEAENERMHLMTALQLRQPSWLFRSGVIVSQGAF 202

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN---APAPAIAIDYWRL 178
              + +AYL SP+  HR VGYLEEEAV +Y++ LKD+E+GS ++     AP +AI YW+L
Sbjct: 203 VTMFSIAYLLSPRFCHRFVGYLEEEAVFTYSKCLKDIESGSLKHWQIKAAPDVAIRYWKL 262

Query: 179 PPDSTLRDVVVVIRADE 195
           P  ++++DVV+ IRADE
Sbjct: 263 PETASMKDVVLAIRADE 279


>gi|384252235|gb|EIE25711.1| threonyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
          Length = 1049

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 10/191 (5%)

Query: 15   KHHKPENYRDKFAYWTVQALKFPTHLFF-------QRRHMCHAMLLETVGAVPGMVGGML 67
            +H  PE + +K  +W V A+++             + + +   + LETV  VPGMVGGML
Sbjct: 830  RHKTPEKWSEKTGFWAVTAMRWSFDKITGYGPNMNEGKWLQRIVFLETVAGVPGMVGGML 889

Query: 68   LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
             H +SLR  E   GWI  LLEEAENERMHL+TF++L +P    RA V   QGVFFN YF 
Sbjct: 890  RHMRSLRVMERDHGWIHTLLEEAENERMHLLTFLKLRQPGPLVRAGVLLTQGVFFNLYFF 949

Query: 128  AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTL 184
             Y+ SPK  H  +GYLEEEAV +YT  + D++NG      + PAP +A  YW++  D+T+
Sbjct: 950  FYMLSPKHCHAFIGYLEEEAVKTYTHAIADIDNGKLPEWADKPAPDLAKFYWKMSEDATM 1009

Query: 185  RDVVVVIRADE 195
            RD+++ +RADE
Sbjct: 1010 RDLLLNVRADE 1020


>gi|219664359|gb|ACL31211.1| alternative oxidase [Crassostrea gigas]
          Length = 332

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/197 (45%), Positives = 122/197 (61%), Gaps = 12/197 (6%)

Query: 10  SINVTKHHKPENYRDKFAYWTVQALKFPTHLFF--------QRRHMCHAMLLETVGAVPG 61
           S+ VT H  PE + DK A+ +V+ L+    L          +++ +     LETV  VPG
Sbjct: 112 SVKVT-HKPPEGFVDKLAFRSVKLLRSTFDLLTGFNWGERTEKKWVLRICFLETVAGVPG 170

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MV  M  H  SLR+ +   GWI  LLEEAENERMHLMT ++L +P W  R+ V   QG F
Sbjct: 171 MVAAMTRHLHSLRRLKRDHGWIHTLLEEAENERMHLMTALQLRQPSWLFRSGVIVSQGAF 230

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAIDYWRL 178
              + +AY+ SP+  HR VGYLEEEAV +Y++ LKD+E+GS    +   AP +AI YW+L
Sbjct: 231 VTMFSIAYMLSPRFCHRFVGYLEEEAVFTYSKCLKDIESGSLKHWQTKAAPDVAIRYWKL 290

Query: 179 PPDSTLRDVVVVIRADE 195
           P  ++++DVV+ IRADE
Sbjct: 291 PETASMKDVVLAIRADE 307


>gi|294867900|ref|XP_002765284.1| alternative oxidase, putative [Perkinsus marinus ATCC 50983]
 gi|239865297|gb|EEQ98001.1| alternative oxidase, putative [Perkinsus marinus ATCC 50983]
          Length = 328

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/191 (49%), Positives = 117/191 (61%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLF----FQRRH----MCHAMLLETVGAVPGMVGGML 67
           H+ P+ + D+ AY++VQAL+    +     F + H    +   + LETV AVPGMVGGM+
Sbjct: 110 HYPPKGFSDRAAYYSVQALRQSFDILSGYKFGQHHAEMWVRRVVFLETVAAVPGMVGGMV 169

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H  SLR  E   GWI  LLEEAENERMHLM  + L  P    R LV   QG+FF  Y L
Sbjct: 170 RHLNSLRNMERDHGWIHTLLEEAENERMHLMIALTLKEPGPLLRGLVLVSQGIFFWTYGL 229

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRLPPDSTL 184
            YL +PK  HR VGYLEEEAV +YT  LK ++ G    F + PAP IA DY+ L  ++TL
Sbjct: 230 LYLLAPKFNHRFVGYLEEEAVKTYTNLLKCIDEGKVSEFASEPAPFIARDYYELGENATL 289

Query: 185 RDVVVVIRADE 195
           RDV   IRADE
Sbjct: 290 RDVFACIRADE 300


>gi|425778082|gb|EKV16227.1| Alternative oxidase [Penicillium digitatum Pd1]
 gi|425780618|gb|EKV18624.1| Alternative oxidase [Penicillium digitatum PHI26]
          Length = 361

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 109/149 (73%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGGML H +SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ 
Sbjct: 152 IFLESVAGVPGMVGGMLRHLRSLRKMKRDNGWIETLLEEAFNERMHLLTFLKLAEPGWFM 211

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAP 167
           R +V   QGVFFN +FLAYL SP++ HR VGYLEEEAV +Y+  +++LE G    +++  
Sbjct: 212 RLMVIGAQGVFFNGFFLAYLISPRICHRFVGYLEEEAVITYSRAIEELETGKLPEWKDLD 271

Query: 168 APAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           AP IAI YW++P     +RD+++ +RADE
Sbjct: 272 APEIAIKYWQMPEGQRQMRDLLLFVRADE 300


>gi|258574597|ref|XP_002541480.1| alternative oxidase [Uncinocarpus reesii 1704]
 gi|237901746|gb|EEP76147.1| alternative oxidase [Uncinocarpus reesii 1704]
          Length = 360

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LETV AVPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++
Sbjct: 152 ERKWIIRFIFLETVAAVPGMVGGMLRHMRSLRRMKRDLGWIETLLEEAYNERMHLLTFLK 211

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           LA P W+ R +V   QGVFFNA+F++YL SP+  HR VGYLEEEAV +YT  + DLE+G 
Sbjct: 212 LAEPGWFMRFMVLGAQGVFFNAFFISYLLSPRTCHRFVGYLEEEAVLTYTHAINDLESGK 271

Query: 163 F---ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
               ++  AP IA+ YW++P     + D++  IRADE
Sbjct: 272 LPRWQDMKAPDIAVTYWKMPEGHQKILDLLYYIRADE 308


>gi|440633254|gb|ELR03173.1| hypothetical protein GMDG_05999 [Geomyces destructans 20631-21]
          Length = 388

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 129/220 (58%), Gaps = 32/220 (14%)

Query: 8   DLSINVT-KHHKPENYRDKFAYWTVQALKFPTHL-------------------------- 40
            ++ N+  +H  PE+  D+FA + ++ L+  T +                          
Sbjct: 115 QMTTNIRFEHRNPEDMSDRFALFLMRMLRKGTDIATGYSHNVTSAATASDPTALESTKPY 174

Query: 41  -FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMT 99
              +R+ +   + LE+V  VPGMV GML H  SLR+ +   GWI+ LLEEA NERMHL+T
Sbjct: 175 KMSERKWLIRFLFLESVAGVPGMVAGMLRHLSSLRRMQRDNGWIETLLEEAYNERMHLLT 234

Query: 100 FIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
           F+++A P W+ R +    QGVFFN+ F+AYL SP+ AHR VGYLEEEAV +Y+  L DLE
Sbjct: 235 FLKMAEPGWFMRLMCLGAQGVFFNSMFVAYLISPRTAHRFVGYLEEEAVLTYSLVLADLE 294

Query: 160 NGSF---ENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
            G     E   AP IAI+YW++P    T++D+++ +RADE
Sbjct: 295 AGKLPKWEGLQAPDIAIEYWKMPEGKRTVKDLILYVRADE 334


>gi|374619172|ref|ZP_09691706.1| alternative oxidase [gamma proteobacterium HIMB55]
 gi|374302399|gb|EHQ56583.1| alternative oxidase [gamma proteobacterium HIMB55]
          Length = 189

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/152 (53%), Positives = 108/152 (71%), Gaps = 1/152 (0%)

Query: 45  RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHS-GGWIKALLEEAENERMHLMTFIEL 103
           R+   A++LETV  VPGMV GM +H KSLR+ +   G  I+ LL EAENERMHLM F+E+
Sbjct: 24  RYGHRAVVLETVAGVPGMVAGMWVHLKSLRQAKTGYGPMIRELLAEAENERMHLMFFVEI 83

Query: 104 ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF 163
           A+P W ERAL+   Q VF   Y + Y+ SPK AH+++ Y EEEAV SYT +LK++E G  
Sbjct: 84  AKPNWVERALILIAQLVFMAYYLVLYIVSPKTAHKMIHYFEEEAVRSYTSYLKEIETGKI 143

Query: 164 ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            + PAP +AIDY+ LPPD+ L D+++ +RADE
Sbjct: 144 ADVPAPKLAIDYYDLPPDAKLSDMILKVRADE 175


>gi|295673346|ref|XP_002797219.1| alternative oxidase [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226282591|gb|EEH38157.1| alternative oxidase [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 352

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/201 (45%), Positives = 120/201 (59%), Gaps = 21/201 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH-----------------MCHAMLLETVGA 58
           H   E + D  A  TV+ L++ T L    +H                 +   + LETV  
Sbjct: 100 HRNAETWSDWVALGTVRMLRWATDLATGYKHPGKSDKNERFVMTEKKWIIRFIFLETVAG 159

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL++F++LA P W  R +V   Q
Sbjct: 160 VPGMVGGMLRHLRSLRRMKRDHGWIETLLEEAYNERMHLLSFLKLAEPGWCMRLMVLGAQ 219

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDY 175
           GVFFN +F+AYL SP+  HR VGYLEEEAV +YT  + DLE G    + N  AP IA+ Y
Sbjct: 220 GVFFNTFFIAYLISPRTCHRFVGYLEEEAVMTYTHAINDLEAGKLPEWANKEAPDIAVSY 279

Query: 176 WRLPPDS-TLRDVVVVIRADE 195
           W +P +  T+ D++  +RADE
Sbjct: 280 WHMPENKRTILDLLYYVRADE 300


>gi|297789037|ref|XP_002862531.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308108|gb|EFH38789.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/199 (48%), Positives = 120/199 (60%), Gaps = 25/199 (12%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAM----LLETV 56
           PWETY+A+LSI++ KHH P N +++      QA  +     F    +   M    +LETV
Sbjct: 127 PWETYQANLSIDLKKHHVP-NRQNRLP--DSQAPPYSHRYIFPGMTLTIWMQSNDMLETV 183

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
            AVPGMVGGMLLH KS+RKFEHSGGWIKALLEEAENERMHLMT +EL +P+WYER LV  
Sbjct: 184 AAVPGMVGGMLLHLKSIRKFEHSGGWIKALLEEAENERMHLMTMMELVKPKWYERLLVML 243

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW 176
           VQG+FFN++ + Y+ SP+LAHRI                     G     P P + +   
Sbjct: 244 VQGIFFNSFLVCYVMSPRLAHRISTM------------------GRSRMLPRPRLLLIIG 285

Query: 177 RLPPDSTLRDVVVVIRADE 195
                   +DVV VIRADE
Sbjct: 286 DCLKMLRWKDVVTVIRADE 304


>gi|328862264|gb|EGG11365.1| hypothetical protein MELLADRAFT_74045 [Melampsora larici-populina
           98AG31]
          Length = 387

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/152 (53%), Positives = 105/152 (69%), Gaps = 3/152 (1%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE++  VPGMV  ML H KSLR     GGWI+ LLEEAENERMHL+TF+++ +P
Sbjct: 168 MARILFLESIAGVPGMVAAMLRHFKSLRMSGRDGGWIRTLLEEAENERMHLLTFMKIRQP 227

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF--- 163
               RA+V   QGVF N +FL+Y+ SP+ AHR VG LEEEAV +Y+  +++LE G     
Sbjct: 228 GIIFRAMVLGAQGVFANLFFLSYMVSPRAAHRFVGILEEEAVVTYSLAIRELETGRLPEW 287

Query: 164 ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           EN PAP IA DYWRL PD+ + DV+  +RADE
Sbjct: 288 ENMPAPQIAKDYWRLLPDAKMIDVLYAVRADE 319


>gi|407924740|gb|EKG17769.1| Alternative oxidase [Macrophomina phaseolina MS6]
          Length = 350

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 124/198 (62%), Gaps = 18/198 (9%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHL--------------FFQRRHMCHAMLLETVGAVPG 61
           H + + + DKFA   V+ L++   L                +R+++   + LE+V  VPG
Sbjct: 101 HREAKTWSDKFALMMVRVLRWGLDLASGYKHAKPGEPFQMSERKYLQRNVFLESVAGVPG 160

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MV  +L H  S+R+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ R +V   QGVF
Sbjct: 161 MVAAVLRHLHSMRRMKRDNGWIETLLEESYNERMHLLTFLKMTEPGWFMRLMVLGAQGVF 220

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRL 178
           FNA F +YL SP+  HR VGYLEEEAV +YT  ++DL+ G    +E   AP IAIDYW++
Sbjct: 221 FNAMFFSYLVSPRTCHRFVGYLEEEAVLTYTREIEDLDAGRLPMWEKMQAPDIAIDYWKM 280

Query: 179 PP-DSTLRDVVVVIRADE 195
           P  + T+RD+++ IRADE
Sbjct: 281 PEGNRTMRDLLLYIRADE 298


>gi|38018226|gb|AAR08189.1| mitochondrial cyanide-resistant terminal oxidase [Penicillium
           chrysogenum]
          Length = 361

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/153 (52%), Positives = 110/153 (71%), Gaps = 4/153 (2%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE+V  VPGMVGGML H +SLRK +   GWI+ LLEEA NERMHL+TF++LA P
Sbjct: 148 MNRFIFLESVAGVPGMVGGMLRHLRSLRKMKRDNGWIETLLEEAFNERMHLLTFLKLAEP 207

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SF 163
            W+ R +V   QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +++LE G    +
Sbjct: 208 GWFMRLMVIGAQGVFFNGFFLSYLISPRICHRFVGYLEEEAVITYTRAIEELEAGKLPQW 267

Query: 164 ENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           ++  AP IAI YW++P     ++D+++ +RADE
Sbjct: 268 DDLDAPEIAIKYWQMPEGQRKMKDLLMFVRADE 300


>gi|255932617|ref|XP_002557865.1| Pc12g10440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582484|emb|CAP80671.1| Pc12g10440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 362

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/149 (53%), Positives = 110/149 (73%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H +SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ 
Sbjct: 153 VFLESIAGVPGMVGGMLRHLRSLRKMKRDNGWIETLLEEAFNERMHLLTFLKLAEPGWFM 212

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAP 167
           R +V   QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +++LE G+   +++  
Sbjct: 213 RVMVIGAQGVFFNGFFLSYLISPRICHRFVGYLEEEAVITYTRAIEELEAGNLPEWKDLD 272

Query: 168 APAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           AP IA+ YW++P     ++D+++ IRADE
Sbjct: 273 APEIAVKYWQMPEGQRKMKDLLLFIRADE 301


>gi|159472945|ref|XP_001694605.1| alternative oxidase, isoform 1 [Chlamydomonas reinhardtii]
 gi|11245480|gb|AAG33633.1|AF314254_1 alternative oxidase 1 [Chlamydomonas reinhardtii]
 gi|9027543|gb|AAC05743.2| alternative oxidase [Chlamydomonas reinhardtii]
 gi|158276829|gb|EDP02600.1| alternative oxidase, isoform 1 [Chlamydomonas reinhardtii]
          Length = 360

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 10/190 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKF---------PTHLFFQRRHMCHAMLLETVGAVPGMVGGM 66
           H  P+         T+Q  ++         PT    + + +   + LETV   PGMV GM
Sbjct: 141 HVTPQKLHQHVGLRTIQVFRYLFDKATGYTPTGSMTEAQWLRRMIFLETVAGCPGMVAGM 200

Query: 67  LLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
           L H KSLR      GWI  LLEEAENERMHL+TF++L +P    RA+V   QGVFFNAYF
Sbjct: 201 LRHLKSLRSMSRDRGWIHTLLEEAENERMHLITFLQLRQPGPAFRAMVILAQGVFFNAYF 260

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-ENAPAPAIAIDYWRLPPDSTLR 185
           +AYL SP+  H  VG+LEEEAV +YT  L +++ G   ++ PAP +A+ YW L P + +R
Sbjct: 261 IAYLLSPRTCHAFVGFLEEEAVKTYTHALVEIDAGRLWKDTPAPPVAVQYWGLKPGANMR 320

Query: 186 DVVVVIRADE 195
           D+++ +RADE
Sbjct: 321 DLILAVRADE 330


>gi|345565383|gb|EGX48333.1| hypothetical protein AOL_s00080g303 [Arthrobotrys oligospora ATCC
           24927]
          Length = 360

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 76/156 (48%), Positives = 108/156 (69%), Gaps = 3/156 (1%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +++ M   + LE++  VPG V G L H KS+R      GWI+ LLEE  NERMHL+TF++
Sbjct: 151 EKKWMVRFIFLESIAGVPGFVAGTLRHLKSIRSLRRDNGWIETLLEEGYNERMHLLTFLK 210

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           L +P  + R ++   QGVF+NA+FL+YL SP+  HR VGYLEEEAV +YT  + D++ G 
Sbjct: 211 LHQPGLFMRLMIIGAQGVFYNAFFLSYLLSPRTCHRFVGYLEEEAVITYTRAISDIDAGK 270

Query: 162 --SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
              FEN  AP IA+DYW++ P +++RD+++ IRADE
Sbjct: 271 LPGFENMKAPQIAVDYWKMNPGASIRDMLLYIRADE 306


>gi|453084800|gb|EMF12844.1| mitochondrial alternative oxidase [Mycosphaerella populorum SO2202]
          Length = 353

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 112/157 (71%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R++M   + LE+V  VPGM  GML H  S+R+ +   GWI++LLEE+ NERMHL+TF++
Sbjct: 142 ERQYMIRNIFLESVAGVPGMAAGMLRHLHSMRRMKRDNGWIESLLEESYNERMHLLTFLK 201

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           +A P W+ + +V   QGVFFNA+F++YL SPK  HR VG+LEEEAV +YT  ++DL+ G 
Sbjct: 202 MAEPGWFMKIMVLGAQGVFFNAFFVSYLISPKTCHRFVGHLEEEAVLTYTREIQDLDAGH 261

Query: 162 --SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IA+ YW +P D  T+RD+++ IRADE
Sbjct: 262 LPKWEKMVAPDIAVKYWNMPADRRTMRDLLLYIRADE 298


>gi|389744708|gb|EIM85890.1| alternative oxidase [Stereum hirsutum FP-91666 SS1]
          Length = 331

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/148 (52%), Positives = 100/148 (67%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV     H KSLR      GWI  LLEEAENERMHLMTF+ L  P W+ 
Sbjct: 122 LFLESIAGVPGMVAATCRHLKSLRLMRRDSGWIHTLLEEAENERMHLMTFMTLRNPGWFF 181

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
           R L+   QGVF+N +F +YL SP++ HR VGYLEEEAV +Y+  ++++E G      N P
Sbjct: 182 RMLILGAQGVFYNMFFFSYLISPRVCHRFVGYLEEEAVITYSRCIQEMEAGRLPLWSNKP 241

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IA DYWRL PD+T+ DV+  +R+DE
Sbjct: 242 APEIAKDYWRLRPDATMLDVIYAVRSDE 269


>gi|32959910|emb|CAE11918.1| alternative oxidase [Pythium aphanidermatum]
          Length = 316

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 13/193 (6%)

Query: 16  HHKPENYRDKFAYWTVQALK----------FPTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           HH P+   ++ AY  V+ ++           P     ++  +   + LETV  VPGMVGG
Sbjct: 97  HHDPKKIHERAAYVAVKLVRKGFDIASGYRGPGGAMTEKDWLHRCLFLETVAGVPGMVGG 156

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           M  H +SLR      GWI  LLEEAENERMHL+ F+ + +P    R LV   QGVFFN +
Sbjct: 157 MARHLRSLRSMRRDYGWIHTLLEEAENERMHLLIFMNMKQPGPLFRLLVLGAQGVFFNMF 216

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDS 182
           F++YL SP+  HR VGYLEEEAV +YT  LKD+E+G    +E   APAIA  Y++LP ++
Sbjct: 217 FVSYLVSPRTCHRFVGYLEEEAVKTYTGLLKDIEDGHLKEWEKMTAPAIARSYYKLPDEA 276

Query: 183 TLRDVVVVIRADE 195
           ++ D++  IRADE
Sbjct: 277 SVYDMIKCIRADE 289


>gi|449300077|gb|EMC96090.1| hypothetical protein BAUCODRAFT_148923 [Baudoinia compniacensis
           UAMH 10762]
          Length = 457

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 106/157 (67%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ M   + LE+V  VPGMV GML H  S+R+ +   GWI+ LLEE+ NERMHL+TF++
Sbjct: 246 ERQWMIRFIFLESVAGVPGMVAGMLRHLHSMRRMKRDNGWIETLLEESYNERMHLLTFMK 305

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           +A P W+ R +V   QGVFFN  FL YL SPK  HR VGYLEEEAV +Y+  L D++ G 
Sbjct: 306 MAEPGWFLRLMVLGAQGVFFNGMFLFYLVSPKTCHRFVGYLEEEAVYTYSRVLSDIDAGK 365

Query: 163 ---FENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              F    AP IA+ YW +P D  ++RD+++ IRADE
Sbjct: 366 LPMFSQMQAPDIAVKYWNMPEDHRSMRDLILYIRADE 402


>gi|74272617|gb|ABA01104.1| mitochondrial alternative oxidase [Chlamydomonas incerta]
          Length = 260

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 85/190 (44%), Positives = 115/190 (60%), Gaps = 10/190 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKF---------PTHLFFQRRHMCHAMLLETVGAVPGMVGGM 66
           H  P+         T+Q  ++         P     + + +   + LETV   PGMV GM
Sbjct: 41  HVSPQKLHQHVGLRTIQVFRYLFDKATGYTPAGTMTEAQWLRRMIFLETVAGCPGMVAGM 100

Query: 67  LLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
           L H KSLR      GWI  LLEEAENERMHL+TF++L +P    RA+V   QGVFFNAYF
Sbjct: 101 LRHLKSLRSMSRDRGWIHTLLEEAENERMHLITFLQLRQPGPAFRAMVIVAQGVFFNAYF 160

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-ENAPAPAIAIDYWRLPPDSTLR 185
           LAYL SP+  H  VG+LEEEAV +YT  L++++ G   ++ PAP +A+ YW L   +T+R
Sbjct: 161 LAYLLSPRTCHAFVGFLEEEAVKTYTHALEEIDAGRLWKDTPAPPVAVQYWGLKQGATMR 220

Query: 186 DVVVVIRADE 195
           D+++ +RADE
Sbjct: 221 DLILAVRADE 230


>gi|403375688|gb|EJY87819.1| Alternative oxidase isoform B [Oxytricha trifallax]
          Length = 273

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 119/199 (59%), Gaps = 11/199 (5%)

Query: 8   DLSINVTKHHKPENYRDKFAYWTVQALK--------FPTHLFFQRRHMCHAMLLETVGAV 59
           D+      H KP+ +RD FA   V+  +        +       ++ M  A+ LETV  V
Sbjct: 35  DIETVPVTHRKPDGFRDWFARTFVRFARGSFDLVSAYNEEKMSAQKWMTRAIFLETVAGV 94

Query: 60  PGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQG 119
           PGMVGGM  H KSLR  +   GWI  LLEEAENERMHL  F+EL +P    +A +   QG
Sbjct: 95  PGMVGGMTRHLKSLRSLKPDHGWIHNLLEEAENERMHLFIFLELKKPTPLFKAAIILTQG 154

Query: 120 VFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAIDYW 176
           VF+N YF++Y+  PK  HR VGYLEEEAV++YT  LK L+NGS       PAP  A +Y+
Sbjct: 155 VFYNLYFISYMLFPKYCHRFVGYLEEEAVHTYTVMLKQLDNGSIPEWSELPAPQNAREYY 214

Query: 177 RLPPDSTLRDVVVVIRADE 195
            L  ++ +RDV++ IRADE
Sbjct: 215 NLSENAKIRDVILSIRADE 233


>gi|299132133|ref|ZP_07025328.1| Alternative oxidase [Afipia sp. 1NLS2]
 gi|298592270|gb|EFI52470.1| Alternative oxidase [Afipia sp. 1NLS2]
          Length = 220

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 115/185 (62%), Gaps = 1/185 (0%)

Query: 12  NVTKHHKPENYRDKFAYWTVQALK-FPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           N+ +HH PE   D+ A+   + +     + FF  R+    ++LETV AVP MV   LLH 
Sbjct: 8   NLLRHHTPERIPDRIAFGLARLVAWMAGNTFFNSRYGDQVIVLETVTAVPPMVVATLLHL 67

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           K LR+    GGW++  ++EAE++R HLM F+ LA+P  +ER L+  VQG+F+NAYF  YL
Sbjct: 68  KCLRRMLDDGGWVRTFMDEAESQRTHLMAFVALAKPNAWERFLIVLVQGIFYNAYFFLYL 127

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S   AHR+  Y  E+AV  Y+++L  +E+G     PAPA+AI YW L PD+ +RD++  
Sbjct: 128 ISAGTAHRLAAYFAEQAVQGYSKYLSQIESGERAMQPAPALAIAYWALAPDAQVRDMIAS 187

Query: 191 IRADE 195
           +  DE
Sbjct: 188 MLEDE 192


>gi|121712010|ref|XP_001273620.1| alternative oxidase, putative [Aspergillus clavatus NRRL 1]
 gi|119401772|gb|EAW12194.1| alternative oxidase, putative [Aspergillus clavatus NRRL 1]
          Length = 333

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 110/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           + +++   + LE++  VPGMVGGML H +SLR+ +   GWI+ LLEE+ NERMHL+TF++
Sbjct: 125 EEKYLIRNIFLESIAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEESYNERMHLLTFLQ 184

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           +A P  + R LV   QGVFFNA+F+AYL +P + HR VGYLEEEAV +YT  + D+E G 
Sbjct: 185 MAEPGLFLRLLVLGAQGVFFNAFFIAYLVNPVICHRFVGYLEEEAVITYTREIADIEAGK 244

Query: 163 F---ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
               EN  AP IA+ YW +P    ++RD+++ IRADE
Sbjct: 245 LPKWENLQAPEIAVKYWNMPEGHRSMRDLLLYIRADE 281


>gi|115400946|ref|XP_001216061.1| alternative oxidase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
 gi|114190002|gb|EAU31702.1| alternative oxidase, mitochondrial precursor [Aspergillus terreus
           NIH2624]
          Length = 324

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 129/215 (60%), Gaps = 21/215 (9%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFP----------------THLFFQR 44
           P  T +  LS+ +  H   +   DK A  TV+ L++                  +   ++
Sbjct: 54  PVYTQEQILSVQIA-HRNAKTISDKLALGTVRFLRWGMDFVTGYRPNTSANPHANTMTEK 112

Query: 45  RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA 104
           + +   + LE+V  VPGMV GML H KS+R+ +   GWI+ LLEEA NERMHL+TF+ LA
Sbjct: 113 KWITRFIFLESVAGVPGMVAGMLRHLKSIRRMKRDYGWIETLLEEAYNERMHLLTFLNLA 172

Query: 105 RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG--- 161
            P  + R +V A Q VFF+A+F AYL SP++ HR VGYLEEEAV +YT+ +KDLENG   
Sbjct: 173 EPSRFMRLMVLASQMVFFSAFFTAYLVSPRICHRFVGYLEEEAVITYTKAIKDLENGLLL 232

Query: 162 SFENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
            +EN  AP IAI YW +P     +R +++ +RADE
Sbjct: 233 DWENLQAPPIAIKYWNMPEGKRCMRSLLLHVRADE 267


>gi|24061751|gb|AAN39883.1| mitochondrial alternative oxidase [Emericella nidulans]
          Length = 354

 Score =  168 bits (426), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 126/202 (62%), Gaps = 22/202 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLETVG 57
           H + +N+ D  A  +V+ L++   L    +H                  +   + LE+V 
Sbjct: 101 HREAKNWSDWVALGSVRLLRWGMDLVTGYKHPAPGQEDIKKFQMTEKEWLRRFVFLESVA 160

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMVGGML H +SLR+ +   GWI+ LLEEA NER+ L+TF+++A P W+ R +V   
Sbjct: 161 GVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERLFLLTFLKMAGPGWFMRLMVLGA 220

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAID 174
           QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KDLE+G    +E   AP IA+ 
Sbjct: 221 QGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTRAIKDLESGRLPHWEKLEAPEIAVK 280

Query: 175 YWRLPP-DSTLRDVVVVIRADE 195
           YW++P  + T++D+++ +RADE
Sbjct: 281 YWKMPEGNRTMKDLLLYVRADE 302


>gi|302689549|ref|XP_003034454.1| hypothetical protein SCHCODRAFT_14899 [Schizophyllum commune H4-8]
 gi|300108149|gb|EFI99551.1| hypothetical protein SCHCODRAFT_14899 [Schizophyllum commune H4-8]
          Length = 378

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 109/169 (64%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           TVQAL+    +      +   + LE++  VPGMV   L H +SLR      GWI   LEE
Sbjct: 148 TVQALRKDGFVLGPDGWLNRFLFLESIAGVPGMVAATLRHLQSLRLMRRDNGWIHTCLEE 207

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L +   + RAL+   QGVF+N +FL Y+  P  AHR VGYLEEEAV 
Sbjct: 208 AENERMHLMTFMTLRKHSIFFRALILGAQGVFYNLFFLTYMIMPAAAHRFVGYLEEEAVR 267

Query: 150 SYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +Y+  ++D+E+     + NAPAP IAIDYWRLP ++T+ DV+  +RADE
Sbjct: 268 TYSHCIQDIESNLVPEWRNAPAPQIAIDYWRLPQNATMLDVIYAVRADE 316


>gi|367046356|ref|XP_003653558.1| hypothetical protein THITE_2116081 [Thielavia terrestris NRRL 8126]
 gi|347000820|gb|AEO67222.1| hypothetical protein THITE_2116081 [Thielavia terrestris NRRL 8126]
          Length = 367

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/155 (50%), Positives = 105/155 (67%), Gaps = 6/155 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+ F  +A P
Sbjct: 162 LVRIIFLESIAGVPGMVGGMLRHLHSLRRLKRDNGWIETLLEESYNERMHLLVFTRMAEP 221

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG----- 161
            W+ + ++   QGVFFNA FL+YL SPK+ HR VGYLEEEAV++YT  LK++ENG     
Sbjct: 222 GWFMKTMILGAQGVFFNAMFLSYLISPKICHRFVGYLEEEAVHTYTRLLKEIENGDLPKW 281

Query: 162 SFENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           S      P IA  YWR+P    T+RD+++ +RADE
Sbjct: 282 SNPKFEVPEIAATYWRMPEGKRTMRDLILYVRADE 316


>gi|392566332|gb|EIW59508.1| alternative oxidase [Trametes versicolor FP-101664 SS1]
          Length = 315

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 113/169 (66%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           ++Q L+   +L  + + +   + LE++ AVPGMV   L H +SLR  +   GWI  LLEE
Sbjct: 84  SLQELQDGGYLMNEAQWLKRILFLESIAAVPGMVAAALRHLRSLRLMQRDSGWIHTLLEE 143

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L  P    RA+V A QGVF+NA+FL+YL SP  +HR VG+LEEEAV 
Sbjct: 144 AENERMHLMTFMTLKNPSILFRAMVIAAQGVFYNAFFLSYLISPSTSHRFVGHLEEEAVI 203

Query: 150 SYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  ++++E G    + + PAP IA DYWRL PD+   DV+  +R+DE
Sbjct: 204 TYTRCIQEIEAGHLPKWADLPAPEIAKDYWRLGPDAKFLDVIYAVRSDE 252


>gi|116196868|ref|XP_001224246.1| hypothetical protein CHGG_05032 [Chaetomium globosum CBS 148.51]
 gi|88180945|gb|EAQ88413.1| hypothetical protein CHGG_05032 [Chaetomium globosum CBS 148.51]
          Length = 368

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/155 (50%), Positives = 108/155 (69%), Gaps = 6/155 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHLMT +++A  
Sbjct: 163 LVRVIFLESIAGVPGMVGGMLRHLHSLRRLKRDNGWIETLLEESFNERMHLMTLMKMAEV 222

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE-- 164
            W+ + ++   QGVFFNA FL+YL SPK+ HR VGYLEEEAV++YT  L+++E G     
Sbjct: 223 GWFMKTMILGAQGVFFNAMFLSYLVSPKITHRFVGYLEEEAVHTYTRLLREIEQGDLPKW 282

Query: 165 NAPA---PAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           + PA   P IAI YWR+P    T++D+++ IRADE
Sbjct: 283 SDPAFQIPEIAITYWRMPEGKRTMKDLILYIRADE 317


>gi|262348244|gb|ACY56340.1| alternative oxidase [Monascus ruber]
          Length = 350

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/149 (52%), Positives = 106/149 (71%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGG L H +SLR      GWI+ LLEEA NERMHL+TF+ +ARP  + 
Sbjct: 150 IFLESVAGVPGMVGGTLRHLRSLRFLRRDNGWIETLLEEAYNERMHLLTFLNVARPGLFM 209

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           R +V   QGVF+N +FL+YL SP++ HR VGYLEEEAV +YT  + D+E G    + N P
Sbjct: 210 RLMVLGAQGVFYNGFFLSYLISPRICHRFVGYLEEEAVITYTRVISDIEEGRVPEWANMP 269

Query: 168 APAIAIDYWRLPP-DSTLRDVVVVIRADE 195
           AP IA+ YW++P  + T++D+++ +RADE
Sbjct: 270 APEIAVQYWKMPEGNRTMKDLLLYVRADE 298


>gi|336363765|gb|EGN92138.1| AOX, alternative oxidase mitochondrial precursor [Serpula lacrymans
           var. lacrymans S7.3]
 gi|336382841|gb|EGO23991.1| alternative oxidase, AOX [Serpula lacrymans var. lacrymans S7.9]
          Length = 384

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 110/169 (65%), Gaps = 3/169 (1%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEE 89
           T++ LK   ++  +R  +   + LETV  VPGMV  +L H  SLR      GWI  LLEE
Sbjct: 154 TLEELKKGGYILDERGWLRRILFLETVAGVPGMVAAVLRHLGSLRLMRRDSGWIHTLLEE 213

Query: 90  AENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
           AENERMHLMTF+ L +P  + RA+V   QGVF+N +FL+Y+ SP+  HR VGYLEEEAV 
Sbjct: 214 AENERMHLMTFMTLRKPSLFFRAMVLGAQGVFYNLFFLSYMISPRTCHRFVGYLEEEAVL 273

Query: 150 SYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +YT  ++++E G      +  AP IA DYWRL PD+ L DV+  +R+DE
Sbjct: 274 TYTRCIEEIEAGRLPEWTDLSAPEIAKDYWRLAPDAKLLDVMYAVRSDE 322


>gi|19547976|gb|AAL87459.1| alternative oxidase [Aspergillus fumigatus]
          Length = 149

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 102/144 (70%), Gaps = 4/144 (2%)

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V  VPGMVGGML H +SLR+ +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V 
Sbjct: 1   VAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPGWFMRLMVL 60

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIA 172
             QGVFFN +FL+YL SP+  HR VGYLEEEAV +YT  +KD+E G    +E   AP IA
Sbjct: 61  GAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVITYTRAIKDIETGKLPDWEKLDAPEIA 120

Query: 173 IDYWRLPPDS-TLRDVVVVIRADE 195
           + YW +P     +RD+++ +RADE
Sbjct: 121 VQYWNMPEGQRKMRDLLLYVRADE 144


>gi|408397324|gb|EKJ76470.1| hypothetical protein FPSE_03380 [Fusarium pseudograminearum CS3096]
          Length = 353

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/222 (39%), Positives = 134/222 (60%), Gaps = 31/222 (13%)

Query: 4   TYKADLSINVTKHHKPENYRDKFAYWTVQALKF------------------PTHLFFQRR 45
           TYK  +++    H +P+   DK A+  V+  ++                  PT     ++
Sbjct: 86  TYKEMMAVEPA-HREPKTIGDKTAWKIVRVARYCMDKATGMDRDQKSDKSKPTTSIVAQK 144

Query: 46  HMCHA------MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMT 99
            +  A      + LE+V  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+T
Sbjct: 145 PLTEAQWLIRFIFLESVAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLT 204

Query: 100 FIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
           F+++  P W+ + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E
Sbjct: 205 FMKMCEPGWFMKMMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIE 264

Query: 160 NGSFE--NAPA---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
           +G+    + P    P IAI YW++P +  T++D+++ IRADE
Sbjct: 265 DGNLPKWSDPKFEIPDIAIQYWKMPKEHRTMKDLILYIRADE 306


>gi|390364451|ref|XP_785497.3| PREDICTED: alternative oxidase, mitochondrial-like
           [Strongylocentrotus purpuratus]
          Length = 289

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/205 (43%), Positives = 125/205 (60%), Gaps = 13/205 (6%)

Query: 2   WETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLL 53
           W   + D ++ VT H+ P+   DK AY+  +AL+     F         +R+ +   + L
Sbjct: 62  WSEEELD-AVEVT-HNPPKERVDKAAYFACKALRANFDFFSGFSWGKRTERKWIYRIIFL 119

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGMV  M  H +SLR+ +   GWI  LLEEAENERMHLMT +E+ +P  + R +
Sbjct: 120 ETVAGVPGMVAAMSRHLRSLRRMQRDHGWIHTLLEEAENERMHLMTALEIKQPSLFFRLM 179

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPA 170
           V   QG+F N +F++YL SP+  HR VGYLEEEAV +YT+ LKDL   +    ++  AP 
Sbjct: 180 VLGAQGIFVNMFFISYLVSPRFCHRFVGYLEEEAVITYTKLLKDLRADALPKWKDRIAPE 239

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           I+I+YW+L PD+   D+   IRADE
Sbjct: 240 ISINYWKLRPDADYIDLFRAIRADE 264


>gi|46108920|ref|XP_381518.1| hypothetical protein FG01342.1 [Gibberella zeae PH-1]
          Length = 476

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 110/151 (72%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 156 IFLESVAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 215

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E+G+    + P 
Sbjct: 216 KMMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIEDGNLPKWSDPK 275

Query: 169 ---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IAI YW++P +  T++D+++ IRADE
Sbjct: 276 FEIPDIAIQYWKMPKEHRTMKDLILYIRADE 306


>gi|171676978|ref|XP_001903441.1| hypothetical protein [Podospora anserina S mat+]
 gi|51701291|sp|Q9C206.1|AOX_PODAS RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|14280024|gb|AAK58849.1|AF321004_1 alternate oxidase precursor [Podospora anserina]
 gi|12584590|emb|CAC27396.1| alternative oxidase [Podospora anserina]
 gi|170936556|emb|CAP61216.1| unnamed protein product [Podospora anserina S mat+]
          Length = 363

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 119/184 (64%), Gaps = 9/184 (4%)

Query: 18  KPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFE 77
           KPE   DK    T  A + P     + + +   + LE++  VPGMV GML H +SLR+ +
Sbjct: 132 KPEQQVDKSNPTTAVAAQKP---LTEAQWLVRFIFLESIAGVPGMVAGMLRHLESLRRLK 188

Query: 78  HSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
              GWI+ LLEE+ NERMHL+TF+++  P W+ + ++   QGVFFNA FL+YL SP++ H
Sbjct: 189 RDNGWIETLLEESYNERMHLLTFMKMCEPGWFMKTMILGAQGVFFNAMFLSYLISPRITH 248

Query: 138 RIVGYLEEEAVNSYTEFLKDLENG-----SFENAPAPAIAIDYWRLPPDS-TLRDVVVVI 191
           R VGYLEEEAV++YT  ++++E G     S  N   P +A+ YW++P    T+RD+++ I
Sbjct: 249 RFVGYLEEEAVHTYTRCIREIEQGDLPKWSDPNFQIPDLAVTYWKMPEGKRTMRDLILYI 308

Query: 192 RADE 195
           RADE
Sbjct: 309 RADE 312


>gi|260268365|dbj|BAI44020.1| alternative oxidase [Microdochium nivale]
          Length = 355

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/151 (52%), Positives = 104/151 (68%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H  SLRK +   GWI+ LLEE+ NERMHLM F+ L  P W+ 
Sbjct: 157 IFLESIAGVPGMVAGMLRHLHSLRKLKRDNGWIETLLEESYNERMHLMVFMRLCEPGWFM 216

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE-----N 165
           + ++   QG++FNA FL+YL SPK+ HR VGYLEEEAV++YT  ++ +E G  E     N
Sbjct: 217 KTMILGAQGIYFNALFLSYLISPKITHRFVGYLEEEAVHTYTTAIEQIEAGHLEKWSSPN 276

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
             AP IAI YWR+P    T+RD+++ IRADE
Sbjct: 277 FQAPDIAISYWRMPEGRRTMRDLLLYIRADE 307


>gi|301106719|ref|XP_002902442.1| alternative oxidase, putative [Phytophthora infestans T30-4]
 gi|262098316|gb|EEY56368.1| alternative oxidase, putative [Phytophthora infestans T30-4]
          Length = 258

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/180 (47%), Positives = 111/180 (61%), Gaps = 13/180 (7%)

Query: 16  HHKPENYRDKFAYWTVQALKF----------PTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           HH      ++ AY  VQ L+           P      +  +   + LE+V  VPGMVGG
Sbjct: 74  HHPITKMHERVAYLAVQTLRTGFDIVSGYRGPGGAMTDKDWVNRCLFLESVAGVPGMVGG 133

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           ML H +SLRKF+   GWI  LLEEAENERMHL+ F+ + +P ++ R LV   QGVFFNA+
Sbjct: 134 MLRHLRSLRKFKRDYGWIHTLLEEAENERMHLLIFMNIKQPGYFFRTLVLGAQGVFFNAF 193

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDS 182
           FL YL SPK  HR VGYLEEEAV +YT  LKD+E+G   +++   AP IA  Y++LP D+
Sbjct: 194 FLTYLVSPKTCHRFVGYLEEEAVKTYTCLLKDIEDGHLDAWKEKKAPLIAQTYYKLPEDA 253


>gi|215983208|gb|ACJ71742.1| alternative oxidase [Paecilomyces sp. J18]
          Length = 372

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 105/149 (70%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGGML H +SLR      GWI++LLEEA NERMHL+TF+++A P W+ 
Sbjct: 170 LFLESVAGVPGMVGGMLRHLRSLRLMRRDNGWIESLLEEAYNERMHLLTFMKMAEPGWFM 229

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           R +V   QGVFFNA+FL+YL SP+  HR VGYLEEEAV++YT  ++DLE G    ++N  
Sbjct: 230 RLMVLGAQGVFFNAFFLSYLCSPRTCHRFVGYLEEEAVHTYTRAIEDLEAGKLPKWQNME 289

Query: 168 APAIAIDYWR-LPPDSTLRDVVVVIRADE 195
           AP IA+ YW  L     + D+ + IRADE
Sbjct: 290 APEIAVQYWNMLEGKPKMLDLPLYIRADE 318


>gi|302921940|ref|XP_003053363.1| hypothetical protein NECHADRAFT_98640 [Nectria haematococca mpVI
           77-13-4]
 gi|256734304|gb|EEU47650.1| hypothetical protein NECHADRAFT_98640 [Nectria haematococca mpVI
           77-13-4]
          Length = 357

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 75/151 (49%), Positives = 110/151 (72%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 160 IFLESIAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 219

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E+G+    N P 
Sbjct: 220 KMMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIEDGNLPKWNDPK 279

Query: 169 ---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW++P +  T++D+++ IRADE
Sbjct: 280 FAIPDIAVQYWQMPKEHRTMKDLILYIRADE 310


>gi|325610915|gb|ADZ36698.1| alternative oxidase [Urechis unicinctus]
          Length = 348

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/200 (45%), Positives = 120/200 (60%), Gaps = 18/200 (9%)

Query: 10  SINVTKHHKPENYRDKFAYWTVQALKFPTHLF-----FQRRHMCHAM------LLETVGA 58
           S++VT H  PE   DK AY  V   KF    +     + R      M       LETV  
Sbjct: 128 SVHVT-HRNPEGIVDKIAYMGV---KFTRGCYDFVSGYSRGRQDEKMWVSRLCFLETVAG 183

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMV  M+ H  SLRK     GWI  LLEEAENERMHLM  ++L +P  + R  V   Q
Sbjct: 184 VPGMVAAMVRHLTSLRKMRRDHGWIHTLLEEAENERMHLMVMLQLKQPSLFFRLGVMVTQ 243

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN---APAPAIAIDY 175
           GVF + + +AY+ SP+L HR VGYLEEEAV +YT+ LK++++G+ ++    P P +AI Y
Sbjct: 244 GVFVSGFSVAYMLSPRLCHRFVGYLEEEAVITYTKLLKEIDSGAMQHWNTLPGPDVAISY 303

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           W+L P + ++DV++ IRADE
Sbjct: 304 WKLRPGAAMKDVILAIRADE 323


>gi|156392184|ref|XP_001635929.1| predicted protein [Nematostella vectensis]
 gi|156223027|gb|EDO43866.1| predicted protein [Nematostella vectensis]
          Length = 175

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 101/147 (68%), Gaps = 3/147 (2%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYER 111
           +LETV  VPGM+G M  H  SLR+     GWI  LLEEAENERMHLMT +EL RP    R
Sbjct: 1   MLETVAGVPGMIGAMTRHFNSLRRLTRDHGWIHTLLEEAENERMHLMTALELKRPGILFR 60

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPA 168
            ++ A QGVF N +F+AYL SP+  HR VGYLEEEAV +YT  L+ ++NG   ++    A
Sbjct: 61  GVILAAQGVFVNMFFIAYLTSPRFCHRFVGYLEEEAVKTYTYCLECIDNGKLPTWNTLKA 120

Query: 169 PAIAIDYWRLPPDSTLRDVVVVIRADE 195
           P IA +YW+L  D+ +RDV++ IRADE
Sbjct: 121 PKIASNYWKLKEDAVMRDVILAIRADE 147


>gi|452981520|gb|EME81280.1| hypothetical protein MYCFIDRAFT_211800 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 341

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R++M   + LE+V  VPGMV GML H  S+R+ +   GWI+ LLEE+ NERMHL+TF++
Sbjct: 131 ERKYMIRNIFLESVAGVPGMVAGMLRHLHSMRRMKRDHGWIETLLEESYNERMHLLTFLK 190

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS 162
           +A P W+ R +V   QGVFFNA+F++YL SP+  HR VG LEEEAV +YT  + DL+ G 
Sbjct: 191 MAEPGWFMRFMVLGAQGVFFNAFFVSYLISPRTCHRFVGLLEEEAVITYTREIADLDAGR 250

Query: 163 ---FENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IA+ YW +P    T+RD+++ IRADE
Sbjct: 251 LPMWEKMQAPDIAVKYWNMPEGHRTMRDLLLYIRADE 287


>gi|395331045|gb|EJF63427.1| alternative oxidase [Dichomitus squalens LYAD-421 SS1]
          Length = 386

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/172 (48%), Positives = 109/172 (63%), Gaps = 3/172 (1%)

Query: 27  AYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL 86
           A  +++ L+   +L  + + +   + LE++ AVPGMV   L H +SLR      GWI  L
Sbjct: 153 ASMSLEELRNGGYLMDESQWLRRILFLESIAAVPGMVAAALRHLRSLRLMRRDHGWIHTL 212

Query: 87  LEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEE 146
           LEEAENERMHLMTF+ L  P    RA+V   QGVF+NA+FL YL SP   HR VG+LEEE
Sbjct: 213 LEEAENERMHLMTFMTLKNPSRLFRAMVLGAQGVFYNAFFLCYLISPSTCHRFVGHLEEE 272

Query: 147 AVNSYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AV +YT  ++++E G      N PAP IA DYWRL PD+   DVV  +R+DE
Sbjct: 273 AVVTYTRCIQEIEAGRLPEWTNLPAPEIAKDYWRLGPDAKFLDVVYAVRSDE 324


>gi|342890501|gb|EGU89319.1| hypothetical protein FOXB_00272 [Fusarium oxysporum Fo5176]
          Length = 353

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 110/151 (72%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 156 IFLESVAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 215

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E+G+    + P 
Sbjct: 216 KMMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIEDGNLPKWSDPK 275

Query: 169 ---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IAI YW++P +  T++D+++ IRADE
Sbjct: 276 FQIPDIAIQYWKMPKEHRTMKDLILYIRADE 306


>gi|393243185|gb|EJD50700.1| alternative oxidase [Auricularia delicata TFB-10046 SS5]
          Length = 370

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 79/148 (53%), Positives = 100/148 (67%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV     H +SLR      GWI  LLEEAENERMHLMTF+ L  P    
Sbjct: 146 LFLESIAGVPGMVAATCRHLRSLRLMRRDAGWIHTLLEEAENERMHLMTFMTLRNPSIGF 205

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           RAL+   QGVF+N +F +YL SPK  HR VG LEEEAV +YT+ + D++NG    + + P
Sbjct: 206 RALILGAQGVFYNLFFFSYLFSPKTCHRFVGILEEEAVYTYTQCISDIKNGHLPEWADKP 265

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IAIDYWRLP ++TL DV+  +R+DE
Sbjct: 266 APEIAIDYWRLPKNATLLDVIYAVRSDE 293


>gi|348682022|gb|EGZ21838.1| hypothetical protein PHYSODRAFT_488439 [Phytophthora sojae]
          Length = 305

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/193 (46%), Positives = 113/193 (58%), Gaps = 13/193 (6%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAM----------LLETVGAVPGMVGG 65
           HH+P    +  A   V+ L+    L    R    AM          LLETV  VPGMV G
Sbjct: 87  HHQPRKIHEYVALLGVKTLRLGFDLLSGYRGPGAAMTVQDWLNRCLLLETVAGVPGMVVG 146

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           M  H +SLR  +   GWI  LLEEAENERMHL+ F+ + +P W  R +V A QGVFF A+
Sbjct: 147 MAHHLRSLRSLKRDSGWIHTLLEEAENERMHLLIFMNMKQPGWGFRMMVLAAQGVFFPAF 206

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE---NAPAPAIAIDYWRLPPDS 182
           +LAYL SPK  HR VG+LEEEAV +YT  L+D+E+G  +      AP I   Y+ LP D+
Sbjct: 207 YLAYLVSPKTCHRFVGFLEEEAVKTYTNLLEDMEHGHLDEWCTTTAPLIGRSYYNLPEDA 266

Query: 183 TLRDVVVVIRADE 195
            + D++  IRADE
Sbjct: 267 KVYDMIKCIRADE 279


>gi|424863271|ref|ZP_18287184.1| alternative oxidase 1c [SAR86 cluster bacterium SAR86A]
 gi|400757892|gb|EJP72103.1| alternative oxidase 1c [SAR86 cluster bacterium SAR86A]
          Length = 200

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 115/177 (64%), Gaps = 1/177 (0%)

Query: 20  ENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHS 79
           EN  D FA    +  +F    FF +R+   A++LETV  VPGMV G+ +H KSLRK +  
Sbjct: 10  ENISDAFALSMTKFFRFIADTFFAKRYGHRAVVLETVAGVPGMVAGVWMHFKSLRKMKVG 69

Query: 80  -GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHR 138
            G  I+ +L EAENERMHLM FIE+A+P ++ER +V   Q +F   Y   Y+   + AHR
Sbjct: 70  YGEQIREMLAEAENERMHLMFFIEIAKPNYFERFIVLFSQMIFGLFYLFMYVFFTRTAHR 129

Query: 139 IVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           ++GY E+EAV SYTE+L+ +E+G  EN PAP +AI Y+ +  DS L D++  +RADE
Sbjct: 130 MIGYFEDEAVKSYTEYLEMVESGKVENIPAPKLAISYYGIGSDSKLSDLIRCVRADE 186


>gi|167518319|ref|XP_001743500.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778599|gb|EDQ92214.1| predicted protein [Monosiga brevicollis MX1]
          Length = 220

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 122/191 (63%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALK-----FPTHLFF---QRRHMCHAMLLETVGAVPGMVGGML 67
           H +P++  D+ A   ++ ++     F  ++F    + + +  A+ LETV  +PGMV G L
Sbjct: 5   HIEPKDLSDRVALTAIRIIRKGFDFFSGYMFGPINETKFLRRAIFLETVAGIPGMVAGSL 64

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H +SLR  +   GWI  LLEEAENERMHL+TF ++ +P    R++V A QG+ +NAYF+
Sbjct: 65  RHLRSLRGMQRDNGWIHTLLEEAENERMHLLTFTKVKQPGIIFRSMVLAAQGIMWNAYFV 124

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTL 184
           AYL SP+  HR +GYLEEEAV +Y+  ++ L+ G   ++ N  AP IA  YW L  D+ +
Sbjct: 125 AYLVSPRTCHRFIGYLEEEAVKTYSHAIEALDKGMMPTWNNKEAPEIAKTYWGLADDALM 184

Query: 185 RDVVVVIRADE 195
           RDV++ +RADE
Sbjct: 185 RDVLLAVRADE 195


>gi|50550329|ref|XP_502637.1| YALI0D09933p [Yarrowia lipolytica]
 gi|49648505|emb|CAG80825.1| YALI0D09933p [Yarrowia lipolytica CLIB122]
          Length = 349

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLE 54
           V +H + + + DK A   ++ +++   LF   RH                      + LE
Sbjct: 92  VVRHREAKTFSDKCALAAIRTMRWSFDLFTGYRHPKPGQENLKRFEMTPDKWYQRFLFLE 151

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           ++  VPGMVGGM  H +SLR  +    WI+ LLEEA NERMHL+TF+++ +P ++ R ++
Sbjct: 152 SIAGVPGMVGGMCRHLQSLRALKRDRAWIETLLEEAYNERMHLLTFLKMHKPGYFMRTMI 211

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-----ENAPAP 169
              QGVFFN +F+AYL SP++ HR VGYLEEEAV +YT  + D++ G            P
Sbjct: 212 LLGQGVFFNLFFMAYLMSPRICHRFVGYLEEEAVITYTRCITDIDAGRLPEWEGHKVKIP 271

Query: 170 AIAIDYWRLPPDSTLRDVVVVIRADE 195
            IAIDYW + P+ T+RD++  IRADE
Sbjct: 272 EIAIDYWHMGPNPTMRDLIEYIRADE 297


>gi|33327044|gb|AAQ08896.1| SHAM-sensitive alternative terminal oxidase isozyme II [Yarrowia
           lipolytica]
          Length = 349

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 23/206 (11%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLE 54
           V +H + + + DK A   ++ +++   LF   RH                      + LE
Sbjct: 92  VVRHREAKTFSDKCALAAIRTMRWSFDLFTGYRHPKPGQENLKRFEMTPDKWYQRFLFLE 151

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           ++  VPGMVGGM  H +SLR  +    WI+ LLEEA NERMHL+TF+++ +P ++ R ++
Sbjct: 152 SIAGVPGMVGGMCRHLQSLRALKRDRAWIETLLEEAYNERMHLLTFLKMHKPGYFMRTMI 211

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-----ENAPAP 169
              QGVFFN +F+AYL SP++ HR VGYLEEEAV +YT  + D++ G            P
Sbjct: 212 LLGQGVFFNLFFMAYLMSPRICHRFVGYLEEEAVITYTRCITDIDAGRLPEWEGHKVKIP 271

Query: 170 AIAIDYWRLPPDSTLRDVVVVIRADE 195
            IAIDYW + P+ T+RD++  IRADE
Sbjct: 272 EIAIDYWHMGPNPTMRDLIEYIRADE 297


>gi|342890541|gb|EGU89342.1| hypothetical protein FOXB_00140 [Fusarium oxysporum Fo5176]
          Length = 341

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 144 IFLESIAGVPGMVGGMLRHLSSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 203

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           + ++   QGVFFN  F+ YL SPK+ HR VGYLEEEAV++YT  +K++E+G     S  N
Sbjct: 204 KVMIIGAQGVFFNGLFICYLLSPKIVHRFVGYLEEEAVHTYTRCIKEIEDGHLPKWSDPN 263

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IAI YW +P +  T++D+++ IRADE
Sbjct: 264 FRIPDIAIQYWNIPEERQTMKDLILYIRADE 294


>gi|51701289|sp|Q8X1N9.1|AOX_BLUGR RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|18033103|gb|AAL56983.1|AF327336_1 alternative oxidase [Blumeria graminis]
          Length = 358

 Score =  165 bits (418), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 131/221 (59%), Gaps = 31/221 (14%)

Query: 6   KADLSINVT-KHHKPENYRDKFAYWTVQALKFPTHL------------------------ 40
           K  +  N++  H  P+++ D+ A + V+ L+F T L                        
Sbjct: 86  KEQMLTNISYAHRTPKDFSDRIALYLVRFLRFSTDLATGYKHDPVTITENGEKVLKKPYR 145

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
             +R+ +   + LE+V  VPGMV GML H  SLR+ +   GWI+ LLEEA NERMHL+TF
Sbjct: 146 MSERKWLIRMVFLESVAGVPGMVAGMLRHLHSLRRLKRDNGWIETLLEEAYNERMHLLTF 205

Query: 101 IELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
           +++A+P W+ + ++   QGVFFN+ FL+YL SP+  HR V YLEEEAV +Y+  ++D+E 
Sbjct: 206 LKMAKPGWFMKFMIIGAQGVFFNSMFLSYLISPRTCHRFVAYLEEEAVLTYSTAIQDIEA 265

Query: 161 GSFE--NAPA---PAIAIDYWRLPP-DSTLRDVVVVIRADE 195
           G      +P    P +A+ YW++P  + T+RD+++ IRADE
Sbjct: 266 GLLPKWTSPEFRIPDLAVQYWKIPEGNRTMRDLLLYIRADE 306


>gi|452002528|gb|EMD94986.1| hypothetical protein COCHEDRAFT_1168437 [Cochliobolus
           heterostrophus C5]
          Length = 356

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 108/157 (68%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           + +++   + LE+V  VPGMV GML H  S+R+ +   GWI++LLEE+ NERMHL+ F++
Sbjct: 148 EEKYLIRNVFLESVAGVPGMVAGMLRHLHSMRRMKRDNGWIESLLEESYNERMHLLVFLK 207

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           + RP  + R +V   QGVFFNA F AYL SP+  HR +GYLEEEAV +YT  +KDL+ G 
Sbjct: 208 MQRPGPFMRLMVLGAQGVFFNALFFAYLLSPRTVHRFIGYLEEEAVITYTRQIKDLDEGR 267

Query: 162 --SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IAIDYW +P    T+RD+++ IRADE
Sbjct: 268 LPKWEKLEAPEIAIDYWHMPEGHRTMRDLLLYIRADE 304


>gi|400596179|gb|EJP63955.1| alternative oxidase [Beauveria bassiana ARSEF 2860]
          Length = 593

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 125/218 (57%), Gaps = 30/218 (13%)

Query: 8   DLSINVTKHHKPENYRD-------KFA-YWTVQALKFPTHLFFQRRHMCHAM-------- 51
           +++  V  H KP  + D       +FA YW  +A          + H   A+        
Sbjct: 328 EMTAVVPAHRKPRTFGDWLAWKTVRFARYWMDKATGMDRQQQVDKSHPTTAVEAEKPLTE 387

Query: 52  --------LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL 103
                    LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++
Sbjct: 388 AQWLIRFVFLESIAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKM 447

Query: 104 ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF 163
             P W+ + ++   QGVFFN  FL YLA+PK+ HR VGYLEEEAV++YT  +K++E+G  
Sbjct: 448 CEPGWFMKLMIIGAQGVFFNGMFLMYLANPKIVHRFVGYLEEEAVHTYTRSIKEIEDGHL 507

Query: 164 EN--APA---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
                P    P IAI YWR+P    T++D+++ IRADE
Sbjct: 508 PRWADPKFRIPDIAIQYWRMPEGHQTMKDLLLYIRADE 545


>gi|77820273|gb|ABB04277.1| alternative oxidase isoform A [Acanthamoeba castellanii]
 gi|77820275|gb|ABB04278.1| alternative oxidase isoform A [Acanthamoeba castellanii]
 gi|440794064|gb|ELR15235.1| alternative oxidase isoform B, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 370

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/196 (46%), Positives = 116/196 (59%), Gaps = 19/196 (9%)

Query: 15  KHHKPENYRDKFAYWTVQALKFP------------THLFFQRRHMCHAMLLETVGAVPGM 62
            H  PEN  DK A  TV+ ++F             T   + RR     + LETV  VPG 
Sbjct: 154 NHTPPENLTDKLALNTVRLMRFNFDWMSGYSWGKLTEADWLRR----IIFLETVAGVPGS 209

Query: 63  VGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
           V  +L H  SLR+ +   GWI  LLEEAENERMHL+T ++L +P    R  V+  QG+FF
Sbjct: 210 VAAILRHLHSLRRLKRDHGWIHTLLEEAENERMHLLTGLKLKQPGKIFRTAVWVTQGIFF 269

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRLP 179
           N +F AYL SP+  HR VGYLEEEAV +YT  L DL+ G    +++ PAP IA  YW++ 
Sbjct: 270 NFFFAAYLVSPRFCHRFVGYLEEEAVRTYTHLLHDLDAGKLPEWKDTPAPEIARQYWKMG 329

Query: 180 PDSTLRDVVVVIRADE 195
            D+  RDVV +IRADE
Sbjct: 330 DDAKWRDVVALIRADE 345


>gi|367023150|ref|XP_003660860.1| alternative oxidase [Myceliophthora thermophila ATCC 42464]
 gi|347008127|gb|AEO55615.1| alternative oxidase [Myceliophthora thermophila ATCC 42464]
          Length = 368

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 114/174 (65%), Gaps = 12/174 (6%)

Query: 34  LKFPTHLFFQRRHMCHA------MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALL 87
           +K PT     ++ +  A      + LE++  VPGMVGGML H  SLR+ +   GWI+ LL
Sbjct: 144 MKNPTTSVTSQKPLTEAQWLVRIIFLESIAGVPGMVGGMLRHLHSLRRLKRDNGWIETLL 203

Query: 88  EEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEA 147
           EE+ NERMHL+  + L +P W  + ++   QGVFFNA FL+YL SPK++HR VGYLEEEA
Sbjct: 204 EESYNERMHLLVALTLGKPGWLMKTMILGAQGVFFNAMFLSYLISPKISHRFVGYLEEEA 263

Query: 148 VNSYTEFLKDLENGSFE--NAPA---PAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           V++YT  ++++ENG     + P+   P IA+ YWR+P    T+RD+ + IRADE
Sbjct: 264 VHTYTRLIREIENGDLPKWSDPSFTVPDIAVTYWRMPEGKRTMRDLFLYIRADE 317


>gi|77820269|gb|ABB04275.1| alternative oxidase isoform B [Acanthamoeba castellanii]
 gi|77820271|gb|ABB04276.1| alternative oxidase isoform B [Acanthamoeba castellanii]
 gi|440802244|gb|ELR23175.1| alternative oxidase isoform A, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 374

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/196 (46%), Positives = 116/196 (59%), Gaps = 19/196 (9%)

Query: 15  KHHKPENYRDKFAYWTVQALKFP------------THLFFQRRHMCHAMLLETVGAVPGM 62
            H  PEN  DK A  TV+ ++F             T   + RR     + LETV  VPG 
Sbjct: 158 NHTPPENLTDKLALNTVRLMRFNFDWMSGYSWGKLTEADWLRR----IIFLETVAGVPGS 213

Query: 63  VGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
           V  +L H  SLR+ +   GWI  LLEEAENERMHL+T ++L +P    R  V+  QG+FF
Sbjct: 214 VAAILRHLHSLRRLKRDHGWIHTLLEEAENERMHLLTGLKLKQPGKIFRTAVWVTQGIFF 273

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRLP 179
           N +F AYL SP+  HR VGYLEEEAV +YT  L DL+ G    +++ PAP IA  YW++ 
Sbjct: 274 NFFFAAYLVSPRFCHRFVGYLEEEAVRTYTHLLHDLDAGKLPEWKDTPAPEIARQYWKMG 333

Query: 180 PDSTLRDVVVVIRADE 195
            D+  RDVV +IRADE
Sbjct: 334 DDAKWRDVVALIRADE 349


>gi|320169629|gb|EFW46528.1| alternative oxidase isoform B [Capsaspora owczarzaki ATCC 30864]
          Length = 379

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/201 (43%), Positives = 121/201 (60%), Gaps = 11/201 (5%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHL-----FFQR---RHMCHAMLLETVG 57
           K +LS     HHKP+N  D  A+  ++ ++    +     F +R   + +   + LETV 
Sbjct: 152 KEELSQVELTHHKPDNLVDWTAFAAIKCIRLGFDVLSGFAFGERTPDKWLTRIIFLETVA 211

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
           AVPGMVG M+ H +SLR      GWI  LLEEAENERMHL+T ++L +P    R  V AV
Sbjct: 212 AVPGMVGAMIRHLQSLRLMRRDHGWIHTLLEEAENERMHLLTALQLKQPSQLFRLAVLAV 271

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAID 174
           QGV  N +F  Y+ +P+  HR VGYLEEEAV +YT+ L D++ G     +   AP IAI+
Sbjct: 272 QGVMTNTFFFLYILAPRFVHRFVGYLEEEAVYTYTKCLDDIKTGKLPEWKTGKAPEIAIN 331

Query: 175 YWRLPPDSTLRDVVVVIRADE 195
           YW+L   +T+ DV+  IR+DE
Sbjct: 332 YWKLDKAATMEDVIYAIRSDE 352


>gi|156061475|ref|XP_001596660.1| hypothetical protein SS1G_02882 [Sclerotinia sclerotiorum 1980]
 gi|154700284|gb|EDO00023.1| hypothetical protein SS1G_02882 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 360

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 33/213 (15%)

Query: 16  HHKPENYRDKFAYWTVQALKFPT---------------------------HLFFQRRHMC 48
           H KP ++ D+ A   V+ L++ T                           +   +R+ + 
Sbjct: 96  HRKPRDFSDRVALCMVRFLRWCTDFATGYKHNVEEPKKASDSNAVAATKPYQMSERKWLI 155

Query: 49  HAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQW 108
             + LE+V  VPGMV GML H +SLR  +   GWI+ LLEEA NERMHL+TF+++  P  
Sbjct: 156 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGI 215

Query: 109 YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SF 163
           + R ++   QGVFFN++F+ YL SP+  HR VGYLEEEAV +YT  ++DLENG     S 
Sbjct: 216 FMRTMILGAQGVFFNSFFICYLLSPRTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWSD 275

Query: 164 ENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
            N  AP +AI+YW +P D  ++RD++  IRADE
Sbjct: 276 PNFKAPDLAIEYWGMPEDQRSMRDLLYYIRADE 308


>gi|85091906|ref|XP_959131.1| alternative oxidase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|28920531|gb|EAA29895.1| alternative oxidase, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 375

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 134/226 (59%), Gaps = 31/226 (13%)

Query: 1   PWETYKADLSINVTKHHK-PENYRDKFAYWTVQALKF------------------PTHLF 41
           P + +K ++ +NV   H+ P  + D  A+  V+  +F                  PT   
Sbjct: 93  PHDGWKENVLLNVVPSHREPRTFGDWVAWKIVRTCRFWMDLVTGMRPEQQVDSKNPTTAL 152

Query: 42  ------FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
                  +R+ +   + LE++  VPGMV G L H +S+R+F+   GWIK+LLEE+ NERM
Sbjct: 153 AASKPLTERQWLVRFIFLESIAGVPGMVAGGLRHLQSIRRFQPDQGWIKSLLEESYNERM 212

Query: 96  HLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFL 155
           HL+TF+E+ +P W+ R +V   QGVF+NA F++YL SPK+ HR VGYLEEEAV++YT  L
Sbjct: 213 HLLTFLEMYKPGWFMRLVVLGAQGVFYNAMFISYLLSPKICHRFVGYLEEEAVHTYTRCL 272

Query: 156 KDLENGSFE-----NAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
            +L++G  +     N   P IA+ YW +P    T++D+++ +RADE
Sbjct: 273 LELDHGCLKRWSDPNFRIPDIAVRYWNMPEGHRTMKDLILYVRADE 318


>gi|336470495|gb|EGO58656.1| alternative oxidase mitochondrial precursor [Neurospora tetrasperma
           FGSC 2508]
 gi|350291545|gb|EGZ72740.1| alternative oxidase mitochondrial precursor [Neurospora tetrasperma
           FGSC 2509]
          Length = 375

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 134/226 (59%), Gaps = 31/226 (13%)

Query: 1   PWETYKADLSINVTKHHK-PENYRDKFAYWTVQALKF------------------PTHLF 41
           P + +K ++ +NV   H+ P  + D  A+  V+  +F                  PT   
Sbjct: 93  PHDGWKENVLLNVVPSHREPRTFGDWVAWKIVRTCRFWMDLVTGMRPEQQVDSKNPTTAL 152

Query: 42  ------FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
                  +R+ +   + LE++  VPGMV G L H +S+R+F+   GWIK+LLEE+ NERM
Sbjct: 153 AASKPLTERQWLVRFIFLESIAGVPGMVAGGLRHLQSIRRFQPDQGWIKSLLEESYNERM 212

Query: 96  HLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFL 155
           HL+TF+E+ +P W+ R +V   QGVF+NA F++YL SPK+ HR VGYLEEEAV++YT  L
Sbjct: 213 HLLTFLEMYKPGWFMRLVVLGAQGVFYNAMFISYLLSPKICHRFVGYLEEEAVHTYTRCL 272

Query: 156 KDLENGSFE-----NAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
            +L++G  +     N   P IA+ YW +P    T++D+++ +RADE
Sbjct: 273 LELDHGCLKRWSDPNFRIPDIAVRYWNMPEGHRTMKDLILYVRADE 318


>gi|169600395|ref|XP_001793620.1| hypothetical protein SNOG_03031 [Phaeosphaeria nodorum SN15]
 gi|111068642|gb|EAT89762.1| hypothetical protein SNOG_03031 [Phaeosphaeria nodorum SN15]
          Length = 348

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/156 (49%), Positives = 110/156 (70%), Gaps = 4/156 (2%)

Query: 44  RRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL 103
           +++M   + LE++  VPGMV GM+ H  S+R+ +   GWI+ LLEE+ NERMHL+ F+++
Sbjct: 141 KKYMIRNVFLESIAGVPGMVAGMIRHLNSMRRMKRDNGWIETLLEESYNERMHLLVFLKM 200

Query: 104 ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF 163
            +P  + R +V A QGV+ NA F AYL SP++ HR+VGYLEEEAV +YT  +KDL+ G  
Sbjct: 201 QQPGPFMRFMVLAAQGVWCNAMFFAYLISPRIVHRLVGYLEEEAVYTYTRQIKDLDAGRL 260

Query: 164 ---ENAPAPAIAIDYWRLPP-DSTLRDVVVVIRADE 195
              E   AP IAIDYW++P  + T+RD+++ IRADE
Sbjct: 261 PEWEKLQAPQIAIDYWKMPEGNRTMRDLLLYIRADE 296


>gi|380095711|emb|CCC07185.1| putative alternative oxidase [Sordaria macrospora k-hell]
          Length = 341

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 122/199 (61%), Gaps = 9/199 (4%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRR---HMCHAMLLETVGAVPGM 62
           + +++  V +H KPE   D  A+  V+  ++ T +    R    +   + LE++  VPGM
Sbjct: 91  EKEMTSVVPEHRKPETVGDWLAWKLVRICRWGTDIATGIRPEQQLVRFIFLESIAGVPGM 150

Query: 63  VGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
           V GML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P    + L+   QGVFF
Sbjct: 151 VAGMLRHLHSLRRLKRDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFF 210

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-----ENAPAPAIAIDYWR 177
           NA FL+YL SPK+ HR VGYLEEEAV++YT  + ++E G       E    P +A+ YWR
Sbjct: 211 NAMFLSYLISPKITHRFVGYLEEEAVHTYTRCINEIEEGHLPKWRDERFQIPEMAVRYWR 270

Query: 178 LPPDS-TLRDVVVVIRADE 195
           +P    T++D++  +RADE
Sbjct: 271 MPEGKRTMKDLIYYVRADE 289


>gi|403416825|emb|CCM03525.1| predicted protein [Fibroporia radiculosa]
          Length = 341

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 7/180 (3%)

Query: 19  PENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEH 78
           P NY++     +++AL+   ++  +++ +   + LE++  VPGMV   L H KSLR  + 
Sbjct: 108 PPNYKN----MSLEALRKGGYIMNEKQWLRRILFLESIAGVPGMVAATLRHLKSLRVMKR 163

Query: 79  SGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHR 138
             GWI  LLEEAENERMHLMTF+ L +P    RA+V   QGVF+NA+F  YL SP+  HR
Sbjct: 164 DSGWIHTLLEEAENERMHLMTFMVLRKPGIIFRAMVIGAQGVFYNAFFFCYLLSPRTCHR 223

Query: 139 IVGYLEEEAVNSYTEFLKDLENGSFEN---APAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            VG+LEEEAV +Y+  + ++E G   N    PAP IA DYWRL  ++ L DV+  +R+DE
Sbjct: 224 FVGHLEEEAVLTYSRCIDEVEAGRLPNWSELPAPEIAKDYWRLESNAKLLDVLYAVRSDE 283


>gi|389630020|ref|XP_003712663.1| alternative oxidase [Magnaporthe oryzae 70-15]
 gi|51701271|sp|O93788.1|AOX_MAGO7 RecName: Full=Alternative oxidase, mitochondrial; AltName:
           Full=AOXMg; AltName: Full=MgAOX; Flags: Precursor
 gi|12240249|gb|AAG49588.1|AF325683_1 alternative terminal oxidase [Magnaporthe grisea]
 gi|3928513|dbj|BAA34672.1| alternative oxidase [Magnaporthe grisea]
 gi|351644995|gb|EHA52856.1| alternative oxidase [Magnaporthe oryzae 70-15]
          Length = 377

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 122/214 (57%), Gaps = 31/214 (14%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKF-------------------PTHLFFQRRHMCHA--- 50
           V  H KP    DKFA+  V+  ++                   PT      + +  A   
Sbjct: 90  VPGHRKPRTLGDKFAWSLVRISRWGMDKVSGLSSEQQQINKGSPTTSIVAAKPLTEAQWL 149

Query: 51  ---MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ 107
              + LE++ AVPGMV GML H  SLR+ +   GWI+ LLEEA NERMHL+TF+++  P 
Sbjct: 150 SRFIFLESIAAVPGMVAGMLRHLHSLRRLKRDNGWIETLLEEAYNERMHLLTFLKMCEPG 209

Query: 108 WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----S 162
           W  + L+   QGV+FNA F+AYL SPK+ HR VGYLEEEAV++YT  +++LE G     S
Sbjct: 210 WLMKILIIGAQGVYFNAMFVAYLISPKICHRFVGYLEEEAVHTYTRSIEELERGDLPKWS 269

Query: 163 FENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
                 P IA+ YW +P    T+RD+++ IRADE
Sbjct: 270 DPKFQVPEIAVSYWGMPEGHRTMRDLLLYIRADE 303


>gi|134079505|emb|CAK46037.1| unnamed protein product [Aspergillus niger]
          Length = 310

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LE+V  VPGMVGGML H KS+R+ +   GWI++L++EA NERMHL+TF++
Sbjct: 102 ERKWLIRFIFLESVAGVPGMVGGMLRHLKSIRRMKRDHGWIESLIDEAYNERMHLLTFLD 161

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           LA P    R +V A QGVFFNA+F+ YL SPK  HR VGYLEEEAV +YT  ++ L+ G 
Sbjct: 162 LADPGIVMRLVVLAAQGVFFNAFFVFYLVSPKTCHRFVGYLEEEAVITYTHAIRQLQAGK 221

Query: 162 --SFENAPAPAIAIDYWRLPPDST-LRDVVVVIRADE 195
             +++N  AP IAI YWR+P     + D+++ +RADE
Sbjct: 222 LPAWDNLSAPEIAIKYWRMPEGKQRMVDLLLYVRADE 258


>gi|317033065|ref|XP_001394812.2| alternative oxidase [Aspergillus niger CBS 513.88]
          Length = 300

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LE+V  VPGMVGGML H KS+R+ +   GWI++L++EA NERMHL+TF++
Sbjct: 92  ERKWLIRFIFLESVAGVPGMVGGMLRHLKSIRRMKRDHGWIESLIDEAYNERMHLLTFLD 151

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           LA P    R +V A QGVFFNA+F+ YL SPK  HR VGYLEEEAV +YT  ++ L+ G 
Sbjct: 152 LADPGIVMRLVVLAAQGVFFNAFFVFYLVSPKTCHRFVGYLEEEAVITYTHAIRQLQAGK 211

Query: 162 --SFENAPAPAIAIDYWRLPPDST-LRDVVVVIRADE 195
             +++N  AP IAI YWR+P     + D+++ +RADE
Sbjct: 212 LPAWDNLSAPEIAIKYWRMPEGKQRMVDLLLYVRADE 248


>gi|350631533|gb|EHA19904.1| hypothetical protein ASPNIDRAFT_39327 [Aspergillus niger ATCC 1015]
          Length = 345

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 111/157 (70%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LE+V  VPGMVGGML H KS+R+ +   GWI++L++EA NERMHL+TF++
Sbjct: 137 ERKWLIRFIFLESVAGVPGMVGGMLRHLKSIRRMKRDHGWIESLIDEAYNERMHLLTFLD 196

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           LA P    R +V A QGVFFNA+F+ YL SPK  HR VGYLEEEAV +YT  ++ L+ G 
Sbjct: 197 LADPGIVMRLVVLAAQGVFFNAFFVFYLVSPKTCHRFVGYLEEEAVITYTHAIRQLQAGK 256

Query: 162 --SFENAPAPAIAIDYWRLPPDST-LRDVVVVIRADE 195
             +++N  AP IAI YWR+P     + D+++ +RADE
Sbjct: 257 LPAWDNLSAPEIAIKYWRMPEGKQRMVDLLLYVRADE 293


>gi|451852964|gb|EMD66258.1| hypothetical protein COCSADRAFT_188646 [Cochliobolus sativus
           ND90Pr]
          Length = 357

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 77/157 (49%), Positives = 108/157 (68%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           + +++   + LE+V  VPGMV GML H  S+R+ +   GWI++LLEE+ NERMHL+ F++
Sbjct: 149 EEKYLIRNVFLESVAGVPGMVAGMLRHLHSMRRMKRDNGWIESLLEESYNERMHLLVFLK 208

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           + RP  + R +V   QGVF NA F AYL SP+  HR +GYLEEEAV +YT  +KDL+ G 
Sbjct: 209 MQRPGPFMRLMVLGAQGVFCNALFFAYLLSPRTVHRFIGYLEEEAVITYTRQIKDLDEGR 268

Query: 162 --SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IA+DYW++P    T+RD+++ IRADE
Sbjct: 269 LPKWEKMEAPEIAVDYWQMPEGHRTMRDLLLYIRADE 305


>gi|242765090|ref|XP_002340904.1| alternative oxidase AlxA, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724100|gb|EED23517.1| alternative oxidase AlxA, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 362

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 26/208 (12%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH----------------------MCHAM 51
           T+H K   + D+FA   VQ L++        RH                      +   +
Sbjct: 103 TEHRKARTWSDRFALAMVQGLRWGMDFVTGYRHPPKGDVKDPKAVTKFTMTERQWLNRVL 162

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYER 111
            LE+V  VPGMV GML H +SLR      GWI+ LLEEA NERMHL+TF+++A P  + R
Sbjct: 163 FLESVAGVPGMVAGMLRHLRSLRTMRRDNGWIETLLEEAYNERMHLLTFMKIAEPGLFMR 222

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPA 168
            +V   QGV+FN  F++YL SP+  HR VGYLEEEAV +YT  ++++E G+    E   A
Sbjct: 223 LMVLGAQGVYFNGLFISYLISPRTCHRFVGYLEEEAVLTYTRVIQEIEAGNLPEWEKMEA 282

Query: 169 PAIAIDYWRLPPD-STLRDVVVVIRADE 195
           P IA+ YW++P    ++ D+++ +RADE
Sbjct: 283 PEIAVKYWQMPEGHRSMLDLMLYVRADE 310


>gi|294955666|ref|XP_002788619.1| alternative oxidase, putative [Perkinsus marinus ATCC 50983]
 gi|239904160|gb|EER20415.1| alternative oxidase, putative [Perkinsus marinus ATCC 50983]
          Length = 305

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 113/191 (59%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLF----FQRRH----MCHAMLLETVGAVPGMVGGML 67
           H+ P    DK AY +V++L+    L     F RR     +   + LETV  VPGMVG M 
Sbjct: 90  HYPPNTLADKAAYASVRSLRTVFDLLSGYRFGRRDAKLWIRRVVFLETVAGVPGMVGAMN 149

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H +SLRK E   GWI  LLEEAENERMHLM  + L +P    RALV   QG FF  Y L
Sbjct: 150 RHLRSLRKMERDFGWIHTLLEEAENERMHLMIALSLMKPGPLLRALVLGAQGAFFTFYGL 209

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRLPPDSTL 184
           AY  SP  AHR VGYLEEEAV +YT  L+ ++ G    F    AP +A DY++LP  +TL
Sbjct: 210 AYALSPNYAHRFVGYLEEEAVLTYTCLLQSVDKGQIPEFALQQAPFVAQDYYQLPSSATL 269

Query: 185 RDVVVVIRADE 195
           RDV   +RADE
Sbjct: 270 RDVFACMRADE 280


>gi|346978317|gb|EGY21769.1| alternative oxidase [Verticillium dahliae VdLs.17]
          Length = 354

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 128/226 (56%), Gaps = 31/226 (13%)

Query: 1   PWETY-KADLSINVTKHHKPENYRD-------KFAYWTVQAL-----------KFPTHLF 41
           P E Y +AD+   V  H  PE + D       + A WT+              K PT   
Sbjct: 82  PHEGYSEADMLAVVPGHRVPETWGDWAAWKFVRVARWTMDRATGLKPEQQVDKKNPTTAV 141

Query: 42  FQRRHMCHA------MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
                +  A      + LE++  VPGMV GML H  SLR+ +   GWI+ LLEE+ NERM
Sbjct: 142 VANEPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLGSLRRMKRDNGWIETLLEESYNERM 201

Query: 96  HLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFL 155
           HL+TF++++ P W+ + ++   QGVFFN  FL+YL SPK+ HR VGYLEEEAV++Y+  +
Sbjct: 202 HLLTFMKMSEPGWFMKVMLIGAQGVFFNGMFLSYLVSPKITHRFVGYLEEEAVHTYSRCI 261

Query: 156 KDLENG-----SFENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           +++E G     S  N   P +A+ YW +P    T+RD+++ IRADE
Sbjct: 262 REIEEGQLPKWSDPNFNIPDLAVQYWNIPEGKRTMRDLILYIRADE 307


>gi|51701290|sp|Q96UR9.1|AOX_MONFR RecName: Full=Alternative oxidase, mitochondrial; AltName:
           Full=MfAOX1; Flags: Precursor
 gi|16517111|gb|AAL24516.1| alternative oxidase [Monilinia fructicola]
          Length = 358

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 120/213 (56%), Gaps = 33/213 (15%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA------------------------- 50
           H KP ++ D+ A   V+ L++ T      +H   A                         
Sbjct: 94  HRKPRDFSDRVALGMVRFLRWCTDFATGYKHNVEAPKTASDSNAVTATKPYQMSERKWLI 153

Query: 51  --MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQW 108
             + LE+V  VPGMV GML H +SLR  +   GWI+ LLEEA NERMHL+TF+++  P  
Sbjct: 154 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGL 213

Query: 109 YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF----- 163
           + R ++   QGVFFN++FL YL SPK  HR VGYLEEEAV +YT  ++DLENG       
Sbjct: 214 FMRTMILGAQGVFFNSFFLCYLFSPKTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWAD 273

Query: 164 ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
            N  AP +AI+YW +P    ++RD++  IRADE
Sbjct: 274 PNFKAPDLAIEYWGMPEGHRSMRDLLYYIRADE 306


>gi|8676907|gb|AAF70262.2| alternative oxidase [Podospora anserina]
          Length = 146

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/142 (53%), Positives = 103/142 (72%), Gaps = 4/142 (2%)

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
            VPGMV GML H +SLRK +   GWI+ LLEEA NERMHL+TF++LA P W+ R +V   
Sbjct: 1   GVPGMVAGMLRHLRSLRKMKRDNGWIETLLEEAFNERMHLLTFLKLAEPGWFMRVMVIGA 60

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAID 174
           QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  +++LE G+    ++  AP IA+ 
Sbjct: 61  QGVFFNGFFLSYLISPRICHRFVGYLEEEAVITYTRAIEELEAGNLPEWKDLDAPEIAVK 120

Query: 175 YWRLPPDS-TLRDVVVVIRADE 195
           YW++P     ++D+++ IRADE
Sbjct: 121 YWQMPEGQRKMKDLLLFIRADE 142


>gi|283444935|gb|ADB20396.1| mitochondrial alternative oxidase 1b [Hypericum perforatum]
 gi|283444937|gb|ADB20397.1| mitochondrial alternative oxidase 1b [Hypericum perforatum]
          Length = 106

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 86/99 (86%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PWE Y+ ++SI++ KHH P  + DK A+WTV++L++PT +FFQRR+ C AM+LETV AVP
Sbjct: 8   PWEAYQPNMSIDLKKHHAPTTFLDKLAFWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVP 67

Query: 61  GMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMT 99
           GMVGGMLLHCKSLR+FEHSGGWIK LL+EAENERMHLMT
Sbjct: 68  GMVGGMLLHCKSLRRFEHSGGWIKTLLDEAENERMHLMT 106


>gi|440469885|gb|ELQ38976.1| alternative oxidase [Magnaporthe oryzae Y34]
 gi|440482974|gb|ELQ63417.1| alternative oxidase [Magnaporthe oryzae P131]
          Length = 387

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 104/151 (68%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++ AVPGMV GML H  SLR+ +   GWI+ LLEEA NERMHL+TF+++  P W  
Sbjct: 163 IFLESIAAVPGMVAGMLRHLHSLRRLKRDNGWIETLLEEAYNERMHLLTFLKMCEPGWLM 222

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           + L+   QGV+FNA F+AYL SPK+ HR VGYLEEEAV++YT  +++LE G     S   
Sbjct: 223 KILIIGAQGVYFNAMFVAYLISPKICHRFVGYLEEEAVHTYTRSIEELERGDLPKWSDPK 282

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW +P    T+RD+++ IRADE
Sbjct: 283 FQVPEIAVSYWGMPEGHRTMRDLLLYIRADE 313


>gi|212528930|ref|XP_002144622.1| alternative oxidase AlxA, putative [Talaromyces marneffei ATCC
           18224]
 gi|210074020|gb|EEA28107.1| alternative oxidase AlxA, putative [Talaromyces marneffei ATCC
           18224]
          Length = 357

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 21/203 (10%)

Query: 14  TKHHKPENYRDKFA----YWTVQALKFPTHL-------------FFQRRHMCHAMLLETV 56
            +H    ++ D+FA    +W  + + F T                 +R+ +   + LE+V
Sbjct: 103 NEHRDVRDWSDRFALTMVHWLRRGMDFVTGYHHPKPGQVGEKFKMNERKWLNRILFLESV 162

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
             VPGMV GML H +SLR      GWI+ LLEEA NERMHL+TF+++A P  + R +V  
Sbjct: 163 AGVPGMVAGMLRHLRSLRTMRRDNGWIETLLEEAYNERMHLLTFMKIAEPGLFMRVMVLG 222

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAI 173
            QGV+FN  F AYL SP+  HR VGYLEEEAV +YT  +++L+ G+    +N  AP IAI
Sbjct: 223 AQGVYFNGLFFAYLVSPRTCHRFVGYLEEEAVLTYTRIIQELQAGNLPEWQNMEAPEIAI 282

Query: 174 DYWRLPPD-STLRDVVVVIRADE 195
           +YW++P     + D+++ +RADE
Sbjct: 283 NYWKMPEGHRKMLDLMLYVRADE 305


>gi|51701293|sp|Q9P429.1|AOX_VENIN RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|9454424|gb|AAF87802.1|AF279690_1 alternative oxidase [Venturia inaequalis]
          Length = 361

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/156 (50%), Positives = 105/156 (67%), Gaps = 4/156 (2%)

Query: 44  RRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL 103
           ++++   + LE+V  VPGMV GML H  S+R+ +   GWI+ LLEE+ NERMHL+ F++L
Sbjct: 154 KQYLVRNVFLESVAGVPGMVAGMLRHLHSMRRMKRDHGWIETLLEESYNERMHLLIFLKL 213

Query: 104 ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF 163
             P W+ R  V   QGVFFNA FL+YL SP+  HR VGYLEEEAV +YT  L DLE G  
Sbjct: 214 YEPGWFMRLAVLGAQGVFFNAMFLSYLISPRTCHRFVGYLEEEAVVTYTRELADLEAGKL 273

Query: 164 ---ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              E   AP IA+DY+ LP    T++D+++ +RADE
Sbjct: 274 PEWETLAAPDIAVDYYNLPEGHRTMKDLLLHVRADE 309


>gi|336269921|ref|XP_003349720.1| alternative oxidase [Sordaria macrospora k-hell]
          Length = 337

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 121/196 (61%), Gaps = 7/196 (3%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           + +++  V +H KPE   D  A+  V+  +    L  + + +   + LE++  VPGMV G
Sbjct: 91  EKEMTSVVPEHRKPETVGDWLAWKLVRICRADKPLT-EAQWLVRFIFLESIAGVPGMVAG 149

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           ML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P    + L+   QGVFFNA 
Sbjct: 150 MLRHLHSLRRLKRDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFFNAM 209

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-----ENAPAPAIAIDYWRLPP 180
           FL+YL SPK+ HR VGYLEEEAV++YT  + ++E G       E    P +A+ YWR+P 
Sbjct: 210 FLSYLISPKITHRFVGYLEEEAVHTYTRCINEIEEGHLPKWRDERFQIPEMAVRYWRMPE 269

Query: 181 DS-TLRDVVVVIRADE 195
              T++D++  +RADE
Sbjct: 270 GKRTMKDLIYYVRADE 285


>gi|402077745|gb|EJT73094.1| alternative oxidase [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 346

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 105/151 (69%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H  SLR+ +   GWI+ LLEEA NERMHL+TF+++  P W+ 
Sbjct: 147 IFLESIAGVPGMVAGMLRHLHSLRRMKRDNGWIETLLEEAYNERMHLLTFLKMCEPGWFL 206

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + L+   QGV+FNA F+AYL SPK+ HR VGYLEEEAV++YT  +K+LE G     + P 
Sbjct: 207 KMLILGAQGVYFNALFVAYLISPKICHRFVGYLEEEAVHTYTRSIKELEAGQLPRWSDPG 266

Query: 169 ---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW +P    T+RD+++ IRADE
Sbjct: 267 FKVPEIAVAYWGMPEGHRTMRDLLLYIRADE 297


>gi|340373435|ref|XP_003385247.1| PREDICTED: alternative oxidase, mitochondrial-like [Amphimedon
           queenslandica]
          Length = 308

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 120/205 (58%), Gaps = 15/205 (7%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFF------------QRRHMCHAMLL 53
           +++L+     H KP  + DK AY +VQ L+F   +F             +++ +   + L
Sbjct: 79  ESELNEVTITHVKPSLFVDKAAYASVQTLRFFFDVFSGYYIGKFRGTLNEKKWLTRIIFL 138

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           ETV  VPGM+  ML H +SLR  +   GWI  LLEEAENERMHL+T + L +P +  R  
Sbjct: 139 ETVAGVPGMIAAMLRHLRSLRYLQRDHGWIHTLLEEAENERMHLLTALVLRKPGFLFRFA 198

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE---NAPAPA 170
           V   QG+F   +  AY+ SPK  HR VGYLEEEAV +YT  L+ ++ G  +      AP+
Sbjct: 199 VIGAQGIFVTLFSAAYIISPKFCHRFVGYLEEEAVKTYTHCLECIDRGDLKVWAKTAAPS 258

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           I+  YW+LP  + +RDV++ IRADE
Sbjct: 259 ISQKYWQLPEGAMMRDVILAIRADE 283


>gi|222612438|gb|EEE50570.1| hypothetical protein OsJ_30719 [Oryza sativa Japonica Group]
          Length = 131

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 87/101 (86%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           MHLMTF+E+A+ +WYER LV A Q VFFNAYFL+YL SPKLAHR++GYLEEEA++SYTE+
Sbjct: 1   MHLMTFMEVAKLRWYERTLVLADQRVFFNAYFLSYLLSPKLAHRVIGYLEEEAIDSYTEY 60

Query: 155 LKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           LKD+E G  EN P P IAIDYWRLP D+TL+DVVVV+ ADE
Sbjct: 61  LKDIEAGKIENVPTPPIAIDYWRLPADATLKDVVVVVCADE 101


>gi|336260284|ref|XP_003344938.1| hypothetical protein SMAC_08419 [Sordaria macrospora k-hell]
 gi|380087699|emb|CCC14107.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 375

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 123/191 (64%), Gaps = 9/191 (4%)

Query: 11  INVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHC 70
           +++    +PE   D     T  A   P     +R+ +   + LE++  VPGMV G L H 
Sbjct: 131 MDLVTGMRPEQQVDSKNPTTALAASKP---LTERQWLVRFIFLESIAGVPGMVAGSLRHL 187

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           +S+R+F+   GWIK+LLEE+ NERMHL+TF+E+ +P W+ R +V   QGVF+NA F++YL
Sbjct: 188 QSIRRFQPDQGWIKSLLEESYNERMHLLTFLEMYKPGWFMRLVVLGAQGVFYNAMFISYL 247

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA---PAIAIDYWRLPPD-STL 184
            SPK+ HR VGYLEEEAV++YT  L +L++G  +  + P    P +A+ YW +P    T+
Sbjct: 248 FSPKICHRFVGYLEEEAVHTYTRCLLELDHGCLKKWSDPKFRIPDLAVRYWNMPEGHRTM 307

Query: 185 RDVVVVIRADE 195
           +D+++ +RADE
Sbjct: 308 KDLILYVRADE 318


>gi|154313707|ref|XP_001556179.1| alternative oxidase [Botryotinia fuckeliana B05.10]
          Length = 361

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 33/213 (15%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA------------------------- 50
           H KP ++ D+ A   V+ L++ T      +H   A                         
Sbjct: 97  HRKPRDFSDRVALGMVRFLRWCTDFATGYKHNVEAPKKASDSNALTATKPYQMSERKWLI 156

Query: 51  --MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQW 108
             + LE+V  VPGMV GML H +SLR  +   GWI+ LLEEA NERMHL+TF+++  P  
Sbjct: 157 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGI 216

Query: 109 YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF----- 163
           + R ++   QGVFFN++FL YL SP+  HR VGYLEEEAV +YT  ++DLENG       
Sbjct: 217 FMRTMILGAQGVFFNSFFLCYLFSPRTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWAD 276

Query: 164 ENAPAPAIAIDYWRLPP-DSTLRDVVVVIRADE 195
            +  AP +A++YW +P  + ++RD++  IRADE
Sbjct: 277 PDFKAPDLAVEYWGMPEGNRSMRDLLYYIRADE 309


>gi|380488128|emb|CCF37588.1| alternative oxidase [Colletotrichum higginsianum]
          Length = 235

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 106/151 (70%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H  SLR+ +   GWI++LLEE+ NERMHL+TF++++ P W+ 
Sbjct: 38  IFLESIAGVPGMVAGMLRHLGSLRRMKRDNGWIESLLEESFNERMHLLTFMKMSEPGWFM 97

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           + ++   QGVFFN  FL+YL +PK+ HR VGYLEEEAV++YT  L +++ G     S  N
Sbjct: 98  KLMILGAQGVFFNGMFLSYLIAPKITHRFVGYLEEEAVHTYTRCLYEIDLGLLPKWSDPN 157

Query: 166 APAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
              P IA+ YWR+P    T++D+++ IRADE
Sbjct: 158 FTIPDIAVQYWRIPEGKRTMKDLIMYIRADE 188


>gi|51701285|sp|Q8NJ59.1|AOX_BOTFU RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|21953239|emb|CAD42731.1| alternative oxidase [Botryotinia fuckeliana]
          Length = 361

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 33/213 (15%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA------------------------- 50
           H KP ++ D+ A   V+ L++ T      +H   A                         
Sbjct: 97  HRKPRDFSDRVALGMVRFLRWCTDFATGYKHNVEAPKKASDSNALTATKPYQMSERKWLI 156

Query: 51  --MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQW 108
             + LE+V  VPGMV GML H +SLR  +   GWI+ LLEEA NERMHL+TF+++  P  
Sbjct: 157 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGI 216

Query: 109 YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF----- 163
           + R ++   QGVFFN++FL YL SP+  HR VGYLEEEAV +YT  ++DLENG       
Sbjct: 217 FMRTMILGAQGVFFNSFFLCYLFSPRTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWAD 276

Query: 164 ENAPAPAIAIDYWRLPP-DSTLRDVVVVIRADE 195
            +  AP +A++YW +P  + ++RD++  IRADE
Sbjct: 277 PDFKAPDLAVEYWGMPEGNRSMRDLLYYIRADE 309


>gi|348681991|gb|EGZ21807.1| hypothetical protein PHYSODRAFT_496550 [Phytophthora sojae]
          Length = 306

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 13/193 (6%)

Query: 16  HHKPENYRDKFAYWTVQALKF----------PTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           HH      ++ AY  V+AL+           P     ++  +   + LE+V  VPGMVGG
Sbjct: 87  HHPIVKMHERVAYMAVKALRTGFDVISGYRGPGGAMTEKDWLNRCLFLESVAGVPGMVGG 146

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           ML H +SLR  +   GWI  LLEEAENERMHL+ F+ + +P ++ RALV   QGVFFN +
Sbjct: 147 MLRHLRSLRLLKRDYGWIHTLLEEAENERMHLLIFMNIKQPGYFFRALVVGAQGVFFNGF 206

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDS 182
           FL YL SPK  HR VGYLEEEAV +Y+  L+D+E+G   +++   AP IA  Y++LP D+
Sbjct: 207 FLTYLVSPKTCHRFVGYLEEEAVKTYSCLLQDIEDGHLDAWKEKKAPLIAQTYYKLPEDA 266

Query: 183 TLRDVVVVIRADE 195
           ++ DVV  +RADE
Sbjct: 267 SIYDVVKCVRADE 279


>gi|299752789|ref|XP_001832846.2| alternative oxidase [Coprinopsis cinerea okayama7#130]
 gi|298410001|gb|EAU88999.2| alternative oxidase [Coprinopsis cinerea okayama7#130]
          Length = 362

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 117/200 (58%), Gaps = 27/200 (13%)

Query: 19  PENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEH 78
           P NY++     +VQ L+   ++  ++  +   + LET+  VPGMV   + H +SLR    
Sbjct: 110 PPNYKE----LSVQYLRDNGYILDEKGWLRRILFLETIAGVPGMVAATIRHLQSLRLMRR 165

Query: 79  SGGW--------------------IKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
             GW                    I   LEEAENERMHLMTF+ L RP    RA++ A Q
Sbjct: 166 DNGWYGLNQRLRGMVGVLNACFHRIHTCLEEAENERMHLMTFMTLRRPSLPFRAIILAAQ 225

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDY 175
           GVF+N +FL+Y+ SPK  HR VGYLEEEAV +YT+ + +LE G    + + PAP I+IDY
Sbjct: 226 GVFYNLFFLSYIISPKTCHRFVGYLEEEAVYTYTKCINELEAGLIPEWTSKPAPEISIDY 285

Query: 176 WRLPPDSTLRDVVVVIRADE 195
           WRL PD+ + D++  +R+DE
Sbjct: 286 WRLSPDAKMLDLLYAVRSDE 305


>gi|347832413|emb|CCD48110.1| aox, alternative oxidase [Botryotinia fuckeliana]
          Length = 358

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 33/213 (15%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA------------------------- 50
           H KP ++ D+ A   V+ L++ T      +H   A                         
Sbjct: 94  HRKPRDFSDRVALGMVRFLRWCTDFATGYKHNVEAPKKASDSNALTATKPYQMSERKWLI 153

Query: 51  --MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQW 108
             + LE+V  VPGMV GML H +SLR  +   GWI+ LLEEA NERMHL+TF+++  P  
Sbjct: 154 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGI 213

Query: 109 YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF----- 163
           + R ++   QGVFFN++FL YL SP+  HR VGYLEEEAV +YT  ++DLENG       
Sbjct: 214 FMRTMILGAQGVFFNSFFLCYLFSPRTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKWAD 273

Query: 164 ENAPAPAIAIDYWRLPP-DSTLRDVVVVIRADE 195
            +  AP +A++YW +P  + ++RD++  IRADE
Sbjct: 274 PDFKAPDLAVEYWGMPEGNRSMRDLLYYIRADE 306


>gi|189211215|ref|XP_001941938.1| alternative oxidase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978031|gb|EDU44657.1| alternative oxidase, mitochondrial precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 352

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 76/157 (48%), Positives = 107/157 (68%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           + +++   + LE+V  VPGMV GML H  S+R+ +   GWI++LLEE+ NERMHL+ F++
Sbjct: 144 EEKYLIRNVFLESVAGVPGMVAGMLRHLHSMRRMKRDNGWIESLLEESYNERMHLLVFLK 203

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           + +P  + R +V   QGVF NA F AYL SP+  HR +GYLEEEAV +YT  ++DL+ G 
Sbjct: 204 MQQPGRFMRLMVLGAQGVFCNALFFAYLLSPRTVHRFIGYLEEEAVITYTRQIEDLDAGR 263

Query: 162 --SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IAIDYW +P    T+RD+++ IRADE
Sbjct: 264 LPKWEKMQAPEIAIDYWNMPEGHRTMRDLLLYIRADE 300


>gi|33087085|gb|AAP92756.1| alternative oxidase 1c [Solanum lycopersicum]
          Length = 87

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 80/87 (91%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERA 112
           LETV AVPGMVGGMLLHCKSLR+FEHSGGWIKALLEEAENERMHLMTF+E+++P+WYER 
Sbjct: 1   LETVAAVPGMVGGMLLHCKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSKPKWYERG 60

Query: 113 LVFAVQGVFFNAYFLAYLASPKLAHRI 139
           LV  VQG+FFN YF+ Y+ SPKLAHRI
Sbjct: 61  LVLMVQGIFFNVYFMTYILSPKLAHRI 87


>gi|340520319|gb|EGR50555.1| predicted protein [Trichoderma reesei QM6a]
          Length = 315

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR  +   GWI+ LLEE+ NERMHL+TF+ +  P W+ 
Sbjct: 118 VFLESIAGVPGMVGGMLRHLSSLRYMKRDNGWIETLLEESYNERMHLLTFMTMCEPGWFM 177

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           + ++   QGVFFN+ F+AYL  PK+ HR VGYLEEEAV++YT  + ++E G     S  N
Sbjct: 178 KLMIIGAQGVFFNSLFVAYLLHPKIVHRFVGYLEEEAVHTYTRAILEIEEGHLPKWSNPN 237

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YWR+P +  T++D+++ IRADE
Sbjct: 238 FRIPDIAVQYWRMPEEHRTMKDLIMYIRADE 268


>gi|429847992|gb|ELA23528.1| alternative oxidase [Colletotrichum gloeosporioides Nara gc5]
          Length = 356

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 105/151 (69%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H  SLR+ +   GWI+ LLEE+ NERMHL+TF++++ P W+ 
Sbjct: 159 IFLESIAGVPGMVAGMLRHLGSLRRMKRDNGWIETLLEESFNERMHLLTFMKMSEPGWFM 218

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           + ++   QGVFFN+ FL+YL SPK+ HR VGYLEEEAV++YT  + +++ G     S   
Sbjct: 219 KTMILGAQGVFFNSMFLSYLVSPKITHRFVGYLEEEAVHTYTRCIHEIDQGLLPKWSDPK 278

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW++P    T++D+++ IRADE
Sbjct: 279 FEIPDIAVQYWKIPEGHRTMKDLIMYIRADE 309


>gi|310793332|gb|EFQ28793.1| alternative oxidase [Glomerella graminicola M1.001]
          Length = 355

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 73/151 (48%), Positives = 104/151 (68%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H  SLR+     GWI+ LLEE+ NERMHL+TF++++ P W+ 
Sbjct: 158 IFLESIAGVPGMVAGMLRHLGSLRRMRRDNGWIETLLEESFNERMHLLTFMKMSEPGWFM 217

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           + ++   QGVFFN  FL+YL +PK+ HR VGYLEEEAV++YT  L +++ G     S  N
Sbjct: 218 KVMILGAQGVFFNGMFLSYLVAPKVTHRFVGYLEEEAVHTYTRCLYEIDQGLLPKWSDPN 277

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW++P    T++D+++ IRADE
Sbjct: 278 FVIPDIAVQYWKIPEGHRTMKDLILYIRADE 308


>gi|406862534|gb|EKD15584.1| hypothetical protein MBM_06212 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 355

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 36/226 (15%)

Query: 3   ETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH---------------- 46
           ET + D+      H KPE++ D+ A + V+ L+F      + +H                
Sbjct: 81  ETMRKDI---FYAHRKPEDFSDRIALFMVRLLRFGMDTATRYKHDVEEPKKVGDSNAVAD 137

Query: 47  -----------MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
                      +   + LE+V  VPGMV GM+ H  SLR+     GWI+ LLEEA NERM
Sbjct: 138 TKPYRMSEPKWLIRMVFLESVAGVPGMVAGMIRHLHSLRRLRRDNGWIETLLEEAYNERM 197

Query: 96  HLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFL 155
           HL+TF+++A P  + R ++   QGVFFN+  L YL SP+  HR VGYLEEEAV +YT  +
Sbjct: 198 HLLTFMKMAEPGRFMRFMILGAQGVFFNSMVLFYLISPRTCHRFVGYLEEEAVLTYTLAI 257

Query: 156 KDLENGSF-----ENAPAPAIAIDYWRLPP-DSTLRDVVVVIRADE 195
           KD+E G            P +A++YW++P  + T+RD+++ IRADE
Sbjct: 258 KDIEAGKLPKWQDPKFKVPELAVNYWKMPEGNRTMRDLLLYIRADE 303


>gi|322697635|gb|EFY89413.1| Alternative oxidase [Metarhizium acridum CQMa 102]
          Length = 354

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 123/210 (58%), Gaps = 30/210 (14%)

Query: 16  HHKPENYRD-------KFA-YWTVQAL----------KFPTHLFFQRRHMCHA------M 51
           H +P N+ D       +FA +W  +A           K PT      + +  A      +
Sbjct: 98  HREPRNFSDWAAWKIVRFARFWMDKATGMGRDQQVDKKHPTTSVVAEKPLTEAQWLVRFV 157

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYER 111
            LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ +
Sbjct: 158 FLESIAGVPGMVGGMLRHLSSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFMK 217

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA- 170
            ++   QGVFFNA F+ YL  P++ HR VGYLEEEAV++YT  ++++E+G       P  
Sbjct: 218 LMIIGAQGVFFNALFITYLLHPRIVHRFVGYLEEEAVHTYTRAIREIEDGHLPKWADPKF 277

Query: 171 ----IAIDYWRLPP-DSTLRDVVVVIRADE 195
               IA+ YW +P  + T++D+++ IRADE
Sbjct: 278 QIPDIAVQYWNMPEGNRTMKDLILYIRADE 307


>gi|51701284|sp|Q8J1Z2.1|AOX_GELSS RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|24061746|gb|AAN39884.1| alternative oxidase [Gelasinospora sp. S23]
          Length = 362

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 9/184 (4%)

Query: 18  KPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFE 77
           +PE   DK    T  +   P     + + +   + LE++  VPGMV GML H  SLR+ +
Sbjct: 130 RPEQQVDKNHPTTATSADKP---LTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLK 186

Query: 78  HSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
              GWI+ LLEE+ NERMHL+TF+++  P    + L+   QGVFFNA FL+YL SPK+ H
Sbjct: 187 RDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFFNAMFLSYLVSPKITH 246

Query: 138 RIVGYLEEEAVNSYTEFLKDLENG-----SFENAPAPAIAIDYWRLPPDS-TLRDVVVVI 191
           R VGYLEEEAV++YT  ++++E G     S E    P +A+ YWR+P    T++D++  I
Sbjct: 247 RFVGYLEEEAVHTYTRCIREIEEGHLPKWSDERFEIPEMAVRYWRMPEGKRTMKDLIYYI 306

Query: 192 RADE 195
           RADE
Sbjct: 307 RADE 310


>gi|85106053|ref|XP_962086.1| alternative oxidase, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|28923681|gb|EAA32850.1| alternative oxidase, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 362

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 9/184 (4%)

Query: 18  KPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFE 77
           +PE   DK    T  +   P     + + +   + LE++  VPGMV GML H  SLR+ +
Sbjct: 130 RPEQQVDKHHPTTATSADKP---LTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLK 186

Query: 78  HSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
              GWI+ LLEE+ NERMHL+TF+++  P    + L+   QGVFFNA FL+YL SPK+ H
Sbjct: 187 RDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFFNAMFLSYLISPKITH 246

Query: 138 RIVGYLEEEAVNSYTEFLKDLENG-----SFENAPAPAIAIDYWRLPPDS-TLRDVVVVI 191
           R VGYLEEEAV++YT  ++++E G     S E    P +A+ YWR+P    T++D++  I
Sbjct: 247 RFVGYLEEEAVHTYTRCIREIEEGHLPKWSDEKFEIPEMAVRYWRMPEGKRTMKDLIHYI 306

Query: 192 RADE 195
           RADE
Sbjct: 307 RADE 310


>gi|222631917|gb|EEE64049.1| hypothetical protein OsJ_18878 [Oryza sativa Japonica Group]
          Length = 131

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 87/101 (86%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           MHLMTF+E+A+P+WYER LV AVQ VFFNAYFL YL SPKLAHR+VGYLE+EA++SYT++
Sbjct: 1   MHLMTFMEVAKPRWYERTLVLAVQRVFFNAYFLGYLLSPKLAHRVVGYLEKEAIHSYTKY 60

Query: 155 LKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           LKD E G  EN PA  IAIDYWRLP  +TL+DVVVV+RA+E
Sbjct: 61  LKDNEAGKIENVPASPIAIDYWRLPAGATLKDVVVVVRANE 101


>gi|71609882|dbj|BAE16575.1| alternative oxidase [Trypanosoma congolense]
          Length = 323

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 109/199 (54%), Gaps = 10/199 (5%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETVGA 58
           AD+      H KP    D  AY  V+  ++    F         + + +   + LETV  
Sbjct: 68  ADVENVAITHKKPNGLVDTLAYRGVRTCRWAFDTFSLYRFGNLTEGKMINRCLFLETVAG 127

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGML H KSLR      GWI  LL EAENERMHLMTFIEL +P +  R  +   Q
Sbjct: 128 VPGMVGGMLRHLKSLRYMTRDKGWINTLLIEAENERMHLMTFIELRQPGFAFRVSIIVTQ 187

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYW 176
            + +     AY+ SP+  HR VGYLEEEAV +YT  L+ ++ G      +  P +A  YW
Sbjct: 188 AIMYLFLLTAYIISPRFVHRFVGYLEEEAVITYTSILRAIDEGRLRPTKSDVPEVARVYW 247

Query: 177 RLPPDSTLRDVVVVIRADE 195
            L  D+T RD++ VIRADE
Sbjct: 248 NLSKDATFRDLINVIRADE 266


>gi|3023302|sp|Q01355.1|AOX_NEUCR RecName: Full=Alternative oxidase, mitochondrial; Short=ALTOX;
           Flags: Precursor
 gi|1161144|gb|AAC37481.1| alternative oxidase [Neurospora crassa]
 gi|24061748|gb|AAN39882.1| alternative oxidase [Neurospora crassa]
          Length = 362

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 9/184 (4%)

Query: 18  KPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFE 77
           +PE   DK    T  +   P     + + +   + LE++  VPGMV GML H  SLR+ +
Sbjct: 130 RPEQQVDKHHPTTATSADKP---LTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLK 186

Query: 78  HSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
              GWI+ LLEE+ NERMHL+TF+++  P    + L+   QGVFFNA FL+YL SPK+ H
Sbjct: 187 RDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFFNAMFLSYLISPKITH 246

Query: 138 RIVGYLEEEAVNSYTEFLKDLENG-----SFENAPAPAIAIDYWRLPPDS-TLRDVVVVI 191
           R VGYLEEEAV++YT  ++++E G     S E    P +A+ YWR+P    T++D++  I
Sbjct: 247 RFVGYLEEEAVHTYTRCIREIEEGHLPKWSDEKFEIPEMAVRYWRMPEGKRTMKDLIHYI 306

Query: 192 RADE 195
           RADE
Sbjct: 307 RADE 310


>gi|71609886|dbj|BAE16577.1| alternative oxidase [Trypanosoma congolense]
          Length = 323

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 108/199 (54%), Gaps = 10/199 (5%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH--------MCHAMLLETVGA 58
           AD+      H KP    D  AY  V+  ++    F   R         +   + LETV  
Sbjct: 68  ADVENVAITHKKPNGLVDTLAYRGVRTCRWAFDTFSLYRFGSLTEGKVINRCLFLETVAG 127

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGML H KSLR      GWI  LL EAENERMHLMTFIEL +P +  R  +   Q
Sbjct: 128 VPGMVGGMLRHLKSLRYMTRDKGWINTLLVEAENERMHLMTFIELRQPGFTFRVSIIVTQ 187

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYW 176
            + +     AY+ SP+  HR VGYLEEEAV +YT  L+ ++ G      +  P +A  YW
Sbjct: 188 AIMYLFLLTAYIISPRFVHRFVGYLEEEAVITYTSILRAIDEGRLRPTKSDVPEVARVYW 247

Query: 177 RLPPDSTLRDVVVVIRADE 195
            L  D+T RD++ VIRADE
Sbjct: 248 NLSKDATFRDLINVIRADE 266


>gi|403351227|gb|EJY75100.1| Alternative oxidase isoform B [Oxytricha trifallax]
          Length = 275

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 11/196 (5%)

Query: 10  SINVTKHHKPENYRDKFAYWTVQALK--------FPTHLFFQRRHMCHAMLLETVGAVPG 61
            +N T H KP ++ D+ A  TV+  +        +    +  R  +   + LET+  VPG
Sbjct: 22  KLNFT-HRKPADFTDRLALTTVKNFRRLFDLLTGYNQDRYSGRLWLNRVIFLETIAGVPG 80

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           M GGM +H KSLR  +   G+I  LLEEAENER HL  F+    P +  RA++   QGVF
Sbjct: 81  MCGGMTIHLKSLRTLKPDRGFIHYLLEEAENERTHLFLFMNYKNPSYLFRAMIAMGQGVF 140

Query: 122 FNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYWRLP 179
           +N YFL YL SP+  HR VGYLEEEAV++Y+ FLK ++ G     N  A  +A DY++L 
Sbjct: 141 WNFYFLWYLISPRFCHRFVGYLEEEAVHTYSIFLKQMDAGYLPEFNVQASKMARDYYQLS 200

Query: 180 PDSTLRDVVVVIRADE 195
            D+T RD+V+ IRADE
Sbjct: 201 DDATFRDMVLSIRADE 216


>gi|388582970|gb|EIM23273.1| alternative oxidase, partial [Wallemia sebi CBS 633.66]
          Length = 401

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/148 (49%), Positives = 104/148 (70%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPG V  ML H +SLR+ +  GG+I  LL EAENERMHLM+F+ + +P  + 
Sbjct: 185 IFLESVAGVPGFVASMLRHLRSLRRMDRDGGYINMLLAEAENERMHLMSFLAVEKPSIWM 244

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           RA+V   QGVFFN +F++YL +PK+ HR    LEEEAV +YT  +K+++ G    +++  
Sbjct: 245 RAMVLGAQGVFFNLFFVSYLINPKICHRFTAVLEEEAVVTYTRAMKEIKAGYVPGWKHKE 304

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
            P+IA  YW+LP DST+ D+V+V+RADE
Sbjct: 305 IPSIARGYWQLPADSTMLDLVMVVRADE 332


>gi|342184354|emb|CCC93836.1| putative alternative oxidase [Trypanosoma congolense IL3000]
          Length = 323

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 108/199 (54%), Gaps = 10/199 (5%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH--------MCHAMLLETVGA 58
           AD+      H KP    D  AY  V+  ++    F   R         +   + LETV  
Sbjct: 68  ADVENVAITHKKPNGLVDTLAYRGVRTCRWAFDTFSLYRFGNLTEGKVINRCLFLETVAG 127

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGML H KSLR      GWI  LL EAENERMHLMTFIEL +P +  R  +   Q
Sbjct: 128 VPGMVGGMLRHLKSLRYMTRDKGWINTLLIEAENERMHLMTFIELRQPGFAFRVSIIVTQ 187

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYW 176
            + +     AY+ SP+  HR VGYLEEEAV +YT  L+ ++ G      +  P +A  YW
Sbjct: 188 AIMYLFLLTAYIISPRFVHRFVGYLEEEAVITYTSILRAIDEGRLRPTKSDVPEVARVYW 247

Query: 177 RLPPDSTLRDVVVVIRADE 195
            L  D+T RD++ VIRADE
Sbjct: 248 NLSKDATFRDLINVIRADE 266


>gi|402471786|gb|EJW05340.1| hypothetical protein EDEG_00610 [Edhazardia aedis USNM 41457]
          Length = 266

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 114/180 (63%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H KP    DKFA+ TV+ L+     +F++ +   A+ LETV A+PGM+GG+  H  SLR 
Sbjct: 68  HFKPITLTDKFAHSTVKFLRSFADFYFKKDYNKRAVALETVAAIPGMIGGLYRHLYSLRS 127

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
            + +G  I  LL+EAENER HL+ F+ + +P   ++ L+ AVQ +FF+ YF+ Y   PK 
Sbjct: 128 LKDNGEKISKLLKEAENERQHLLAFLAIKKPSIIDKILIHAVQPLFFSFYFMLYGFMPKT 187

Query: 136 AHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AHR VGYLEEEA+ SY  + +++  G+ +N      A  YW++P ++ L D+V  +RADE
Sbjct: 188 AHRFVGYLEEEAIRSYDMYEEEILKGNIKNVDISEGAKSYWKMPDNAKLLDLVRAVRADE 247


>gi|71609884|dbj|BAE16576.1| alternative oxidase [Trypanosoma congolense]
          Length = 323

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 108/199 (54%), Gaps = 10/199 (5%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH--------MCHAMLLETVGA 58
           AD+      H KP    D  AY  V+  ++    F   R         +   + LETV  
Sbjct: 68  ADVENVAITHKKPNGLVDTLAYRGVRTCRWAFDTFSLYRFGNLTEGKVINRCLFLETVAG 127

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMVGGML H KSLR      GWI  LL EAENERMHLMTFIEL +P +  R  +   Q
Sbjct: 128 VPGMVGGMLRHLKSLRYMTRDKGWINTLLIEAENERMHLMTFIELRQPGFAFRVSIIVTQ 187

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYW 176
            + +     AY+ SP+  HR VGYLEEEAV +YT  L+ ++ G      +  P +A  YW
Sbjct: 188 AIMYLFLLTAYIISPRFVHRFVGYLEEEAVITYTSILRAIDEGRLRPTKSDVPEVARVYW 247

Query: 177 RLPPDSTLRDVVVVIRADE 195
            L  D+T RD++ VIRADE
Sbjct: 248 NLSKDATFRDLINVIRADE 266


>gi|330907160|ref|XP_003295728.1| hypothetical protein PTT_02544 [Pyrenophora teres f. teres 0-1]
 gi|311332743|gb|EFQ96174.1| hypothetical protein PTT_02544 [Pyrenophora teres f. teres 0-1]
          Length = 352

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/157 (48%), Positives = 107/157 (68%), Gaps = 4/157 (2%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           + +++   + LE+V  VPGMV GML H  S+R+ +   GWI++LLEE+ NERMHL+ F++
Sbjct: 144 EEKYLIRNVFLESVAGVPGMVAGMLRHLHSMRRMKRDNGWIESLLEESYNERMHLLVFLK 203

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG- 161
           + +P  + R +V   QGV+ NA F AYL SP+  HR VGYLEEEAV +YT  ++DL+ G 
Sbjct: 204 MQQPGRFMRLMVLGAQGVWCNALFFAYLLSPRTVHRFVGYLEEEAVITYTRQIEDLDAGR 263

Query: 162 --SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              +E   AP IAIDYW +P    T+RD+++ IRADE
Sbjct: 264 LPKWEKMQAPEIAIDYWNMPEGHRTMRDLLLYIRADE 300


>gi|62241308|dbj|BAD93711.1| alternative oxidase 1b [Candida maltosa]
          Length = 348

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 100/154 (64%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE+V  VPG V G L H  SLR       WI+ L +EA NERMHL+TFI++ +P
Sbjct: 142 MTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLYDEAYNERMHLLTFIKIGKP 201

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG----S 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +YT  +++++       
Sbjct: 202 SWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTYTHLIEEIDTKGKLPG 261

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FEN   P IA+ YW  L P+ST RD+++ IRADE
Sbjct: 262 FENMKIPEIAVQYWPELTPESTFRDLILRIRADE 295


>gi|336470634|gb|EGO58795.1| mitochondrial Alternative oxidase [Neurospora tetrasperma FGSC
           2508]
 gi|350291699|gb|EGZ72894.1| mitochondrial alternative oxidase [Neurospora tetrasperma FGSC
           2509]
          Length = 362

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 113/184 (61%), Gaps = 9/184 (4%)

Query: 18  KPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFE 77
           +PE   DK    T  +   P     + + +   + LE++  VPGMV GML H  SLR+ +
Sbjct: 130 RPEQQVDKHHPTTATSADKP---LTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLK 186

Query: 78  HSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
              GWI+ LLEE+ NERMHL+TF+++  P    + L+   QGVFFNA FL+YL SPK+ H
Sbjct: 187 RDNGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILGAQGVFFNAMFLSYLISPKITH 246

Query: 138 RIVGYLEEEAVNSYTEFLKDLENGSF-----ENAPAPAIAIDYWRLPPDS-TLRDVVVVI 191
           R VGYLEEEAV++YT  ++++E G       E    P +A+ YWR+P    T++D++  I
Sbjct: 247 RFVGYLEEEAVHTYTRCIREIEEGHLPKWRDEKFEIPEMAVRYWRMPEGKRTMKDLIHYI 306

Query: 192 RADE 195
           RADE
Sbjct: 307 RADE 310


>gi|159490736|ref|XP_001703329.1| alternative oxidase [Chlamydomonas reinhardtii]
 gi|9930474|gb|AAG02081.1|AF285187_1 alternative oxidase [Chlamydomonas reinhardtii]
 gi|11245482|gb|AAG33634.1|AF314255_1 alternative oxidase 2 [Chlamydomonas reinhardtii]
 gi|158280253|gb|EDP06011.1| alternative oxidase [Chlamydomonas reinhardtii]
          Length = 347

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 100/146 (68%), Gaps = 1/146 (0%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LET+  VPGMV G+L H KSLR  +   GWI  LL+EAENERMHL+TF EL +P    
Sbjct: 173 IFLETIAGVPGMVAGVLRHLKSLRSMKRDHGWIHTLLQEAENERMHLLTFFELRKPGPLF 232

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF-ENAPAP 169
           RA +   QGVF+N YF+ YL SP+  H  VG+LEEEAV +YT  L++++ G   +   AP
Sbjct: 233 RASIIVAQGVFWNLYFIGYLVSPRTCHAAVGFLEEEAVKTYTHALQEIDAGRLWKGKVAP 292

Query: 170 AIAIDYWRLPPDSTLRDVVVVIRADE 195
            IA +YW L P +++RD+++ +RADE
Sbjct: 293 PIACEYWGLKPGASMRDLILAVRADE 318


>gi|222635049|gb|EEE65181.1| hypothetical protein OsJ_20292 [Oryza sativa Japonica Group]
          Length = 130

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/101 (73%), Positives = 85/101 (84%), Gaps = 1/101 (0%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           MHLMTF+E  +P+WYER LV AVQ VFFNAYFL YL SPKLAHR+VGYLEEEA++ YTE+
Sbjct: 1   MHLMTFMEAVKPRWYERTLVLAVQRVFFNAYFLGYLLSPKLAHRVVGYLEEEAIHPYTEY 60

Query: 155 LKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           LKD+E G  EN PAP IAIDYWRLP  +TL+DVV+V RADE
Sbjct: 61  LKDIEAGKIENVPAPPIAIDYWRLPAGATLKDVVIV-RADE 100


>gi|14348862|gb|AAK61349.1|AF363785_1 alternative oxidase [Venturia inaequalis]
          Length = 358

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/156 (49%), Positives = 103/156 (66%), Gaps = 4/156 (2%)

Query: 44  RRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL 103
           ++++   + L +V  VPGMV GML H  S+R+ +   GW + LLEE+ NERMHL+ F++L
Sbjct: 151 KQYLVRNVFLXSVAGVPGMVAGMLRHLHSMRRMKRDHGWXETLLEESYNERMHLLIFLKL 210

Query: 104 ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF 163
             P W+ R  V   QGVFFNA FL+YL SP+  HR VGYLEEEAV +YT  L DLE G  
Sbjct: 211 YEPGWFMRLAVLGAQGVFFNAMFLSYLISPRTCHRFVGYLEEEAVVTYTRELADLEAGKL 270

Query: 164 ---ENAPAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              E   AP IA+DY+ LP    T++D+++ +RADE
Sbjct: 271 PEWETLAAPDIAVDYYNLPEGHRTMKDLLLHVRADE 306


>gi|255943405|ref|XP_002562471.1| Pc18g06440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587204|emb|CAP94868.1| Pc18g06440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 331

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 23/205 (11%)

Query: 14  TKHHKPENYRDKFAYWTVQALKF-------------------PTHLFFQRRHMCHAMLLE 54
           T H K   ++D+ A  TV+ L++                     ++  + + +   + LE
Sbjct: 76  TAHRKAYTWQDRAALGTVRLLRWGMDFVSGYNSRPANTNTLSKAYVMTEEKWITRFVFLE 135

Query: 55  TVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALV 114
           +V  VPGMV GML H KS+R+     GWI+ LLEEA NERMHL+TF++LA P    R +V
Sbjct: 136 SVAGVPGMVAGMLRHLKSIRRMRRDNGWIETLLEEAYNERMHLLTFLKLAEPGPAMRFMV 195

Query: 115 FAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAI 171
              Q VFF+ + LAYL SP++ HR VGYLEEEAV +Y++ ++DLE+G   ++E   AP +
Sbjct: 196 LGAQWVFFSGFSLAYLISPQICHRFVGYLEEEAVITYSKAIRDLEDGHLPAWEGLQAPEM 255

Query: 172 AIDYWRLPPDS-TLRDVVVVIRADE 195
           AI YW++P     +R +++ +RADE
Sbjct: 256 AIKYWQMPEGQRCMRSLLLYVRADE 280


>gi|392577482|gb|EIW70611.1| hypothetical protein TREMEDRAFT_28860 [Tremella mesenterica DSM
           1558]
          Length = 363

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 3/168 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           ++ L+    L   +  +   +LLE+   VPGMV G L H +SLR+    GGWI  LLEEA
Sbjct: 127 IEELRAKGLLLSDKAWLMRIILLESFAGVPGMVAGTLRHLRSLRRLRRDGGWIHTLLEEA 186

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           ENERMHL+TF+ +A+P W  R  V   QGV +N  F  YL +PK AHR V  LEEEAV +
Sbjct: 187 ENERMHLLTFMTIAQPSWLTRVAVLGAQGVMYNLLFATYLITPKTAHRFVAALEEEAVKT 246

Query: 151 YTEFLKDLENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           YT  ++D++ G    +++ PAP IAIDYWRLP  + L DV+  +RADE
Sbjct: 247 YTHCVEDMQKGLVPEWDDVPAPQIAIDYWRLPQSAKLIDVIRAVRADE 294


>gi|396466567|ref|XP_003837720.1| similar to alternative oxidase [Leptosphaeria maculans JN3]
 gi|312214283|emb|CBX94276.1| similar to alternative oxidase [Leptosphaeria maculans JN3]
          Length = 356

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/181 (44%), Positives = 113/181 (62%), Gaps = 17/181 (9%)

Query: 19  PENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEH 78
           PE  + KFA               + +++   + LE+V  VPGMV GML H  S+R+ + 
Sbjct: 137 PEAAKQKFA-------------MTEEKYLVRNVFLESVAGVPGMVAGMLRHLHSMRRMKR 183

Query: 79  SGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHR 138
             GWI++LLEE+ NERMHL+ F+++ +P  + R +V   QGV+ NA F AYL SP+  HR
Sbjct: 184 DNGWIESLLEESFNERMHLLVFLKMQKPGPFMRFMVLVAQGVWCNALFFAYLLSPRTVHR 243

Query: 139 IVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPD-STLRDVVVVIRAD 194
            VGYLEEEAV +YT  ++DL+ G    +E   AP IA+DYW +P    T+RD+++ IRAD
Sbjct: 244 FVGYLEEEAVITYTRQIEDLDAGRLPKWEKMEAPEIAVDYWHMPEGRRTMRDLLLYIRAD 303

Query: 195 E 195
           E
Sbjct: 304 E 304


>gi|218197681|gb|EEC80108.1| hypothetical protein OsI_21855 [Oryza sativa Indica Group]
          Length = 130

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           MHLMTF+E  +P+WYER LV AVQ VFFNAYFL YL SPKLAHR+VGYLEEEA++ YTE+
Sbjct: 1   MHLMTFMEAVKPRWYERTLVLAVQRVFFNAYFLGYLLSPKLAHRVVGYLEEEAIHPYTEY 60

Query: 155 LKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           LKD+E G  EN PAP IAIDYW+LP  +TL+DVV+V RADE
Sbjct: 61  LKDIEAGKIENVPAPPIAIDYWQLPAGATLKDVVIV-RADE 100


>gi|296418840|ref|XP_002839033.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635027|emb|CAZ83224.1| unnamed protein product [Tuber melanosporum]
          Length = 383

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 101/148 (68%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGM  GM+ H  SLR+ +    WI+ LLEEA NER+HL+TF+   +P  + 
Sbjct: 147 IFLESIAGVPGMAAGMIRHLNSLRRLKRDNAWIETLLEEAYNERLHLLTFLHYRQPGLFM 206

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           R ++   QG+FFN +F++YL SP+  HR VGY+EEEAV +YT  + D+ENG    +EN  
Sbjct: 207 RTMILGAQGIFFNLFFISYLVSPRTCHRFVGYIEEEAVITYTRAIADIENGRIPEWENLL 266

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IAI Y+ L PD+ + +++ VIRADE
Sbjct: 267 APDIAIKYFGLGPDANMLELLKVIRADE 294


>gi|38345481|emb|CAE01695.2| OSJNBa0010H02.19 [Oryza sativa Japonica Group]
          Length = 125

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/95 (74%), Positives = 83/95 (87%)

Query: 101 IELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
           +E+A+P+WYER LV AVQ VFFNAYFL YL SPKLAHR+VGYLEEEA++SYTE+LKD+E 
Sbjct: 1   MEVAKPRWYERTLVLAVQRVFFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIEA 60

Query: 161 GSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           G  EN PAP IAIDYWRLP  +TL+DVVVV+RADE
Sbjct: 61  GKIENVPAPPIAIDYWRLPAGATLKDVVVVVRADE 95


>gi|294655674|ref|XP_457848.2| DEHA2C03828p [Debaryomyces hansenii CBS767]
 gi|199430515|emb|CAG85893.2| DEHA2C03828p [Debaryomyces hansenii CBS767]
          Length = 338

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 9/187 (4%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           VT + KP N +D          K   +   + + +   + LE++  VPGMV   + H  S
Sbjct: 104 VTGYKKPANEQD-----IQDGFKGTRYEMTEPKWLTRCIFLESIAGVPGMVAAFIRHLHS 158

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR       WI+ LL+EA NERMHL+TFI+L RP W+ R++++  QGVF N +F+ YL +
Sbjct: 159 LRLLRRDKAWIETLLDEAYNERMHLLTFIKLGRPSWFTRSIIYIGQGVFCNLFFMCYLIN 218

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYW-RLPPDSTLRDVV 188
           PK  HR VGYLEEEAV++YT  L++L+ G    F+N   PAI+  YW  L   S+  D++
Sbjct: 219 PKYCHRFVGYLEEEAVSTYTHLLEELKMGKLKEFDNIQIPAISWQYWPELDEKSSFTDLI 278

Query: 189 VVIRADE 195
           + IRADE
Sbjct: 279 LRIRADE 285


>gi|149189352|ref|ZP_01867637.1| alternative oxidase [Vibrio shilonii AK1]
 gi|148836710|gb|EDL53662.1| alternative oxidase [Vibrio shilonii AK1]
          Length = 149

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 91/125 (72%)

Query: 71  KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYL 130
           K+LR+     GWI+ LL+EAENERMHLM F+++A+P W ER +V   QGVF   Y + YL
Sbjct: 1   KALRRMRDDEGWIRELLDEAENERMHLMIFLDIAKPSWLERLIVLLGQGVFIVVYSIIYL 60

Query: 131 ASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVV 190
            S K+AHR+VGY EEEA  SYTE+L+ ++ G  EN PAP IAIDY++L  D+ LRDVV+ 
Sbjct: 61  LSSKVAHRVVGYFEEEACKSYTEYLEKIDEGYIENIPAPQIAIDYYQLADDALLRDVVLR 120

Query: 191 IRADE 195
           IR DE
Sbjct: 121 IRQDE 125


>gi|320587810|gb|EFX00285.1| alternative oxidase [Grosmannia clavigera kw1407]
          Length = 823

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H +S+R+ +   GWI+ LLEE+ NERMHL+TF+++  P  + 
Sbjct: 625 IFLESIAGVPGMVAGMLRHLRSIRQLKRDNGWIETLLEESFNERMHLLTFLKMCEPGRFM 684

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + ++   QGV+FNA FL+YL SP++ HR VGYLEEEAV++YT  L +++ G     + PA
Sbjct: 685 KLMILGAQGVYFNAMFLSYLISPRICHRFVGYLEEEAVHTYTRCLAEMDAGGTPLWSDPA 744

Query: 169 ---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW +P D  T++D+++ IRADE
Sbjct: 745 FKVPEIAVKYWHMPEDRRTMKDLILYIRADE 775


>gi|196000520|ref|XP_002110128.1| hypothetical protein TRIADDRAFT_20435 [Trichoplax adhaerens]
 gi|190588252|gb|EDV28294.1| hypothetical protein TRIADDRAFT_20435 [Trichoplax adhaerens]
          Length = 181

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/148 (52%), Positives = 96/148 (64%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LETV  VPGMV  M  H  SLR+     GWI  LLEEAENERMHL+T + L RP  + 
Sbjct: 9   IFLETVAGVPGMVAAMTRHLHSLRRMRRDYGWIHTLLEEAENERMHLLTALHLKRPGPFF 68

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           RA V   QG+F N + L+YL SP+  HR VGYLEEEAV +YT+ L  ++ G    +    
Sbjct: 69  RACVILGQGIFVNFFILSYLISPRFCHRFVGYLEEEAVITYTKCLNQIDRGYLPMWAKMD 128

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IA  YW+L PD+ +RDV++ IRADE
Sbjct: 129 APDIARTYWQLKPDAKMRDVILAIRADE 156


>gi|42733304|dbj|BAD11307.1| alternative oxidase [Trypanosoma vivax]
          Length = 328

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/191 (44%), Positives = 112/191 (58%), Gaps = 13/191 (6%)

Query: 17  HKP-ENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETVGAVPGMVGGML 67
           HKP E   D  AY  V+  ++    F         +++ +   + LETV  VPGMVGGML
Sbjct: 78  HKPAEGIVDTLAYRLVRTCRWAFDTFSLYRFGSLTEQKVINRCLFLETVAGVPGMVGGML 137

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H  SLR+     GWI  LL EAENERMHLMTFIEL +P    R  +   Q + ++   +
Sbjct: 138 RHLTSLRQMRRDKGWINTLLVEAENERMHLMTFIELRQPGVVFRLSIKITQAIMYSFLLI 197

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTL 184
           AY+ SP+  HR VGYLEEEAV +YT  L+ +++G     +NA  P +A  YW L  D+T 
Sbjct: 198 AYITSPRFVHRFVGYLEEEAVVTYTGILRAIDDGRLPPMKNA-VPDVARVYWGLNKDATF 256

Query: 185 RDVVVVIRADE 195
           RD++ VIRADE
Sbjct: 257 RDLINVIRADE 267


>gi|218195344|gb|EEC77771.1| hypothetical protein OsI_16922 [Oryza sativa Indica Group]
          Length = 128

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/98 (71%), Positives = 83/98 (84%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           MTF+E+A+ +WYER LV AVQ VFFN YFL YL SPKLAHR+V YLEEEA++SYTE+LKD
Sbjct: 1   MTFMEVAKQRWYERTLVLAVQRVFFNTYFLGYLLSPKLAHRVVAYLEEEAIHSYTEYLKD 60

Query: 158 LENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +E G  EN PAP IAIDYWRLP  +TL+DVVVV+RA+E
Sbjct: 61  IEAGKIENVPAPPIAIDYWRLPTGATLKDVVVVVRANE 98


>gi|68464765|ref|XP_723460.1| constitutive alternative oxidase [Candida albicans SC5314]
 gi|68465142|ref|XP_723270.1| constitutive alternative oxidase [Candida albicans SC5314]
 gi|46445297|gb|EAL04566.1| constitutive alternative oxidase [Candida albicans SC5314]
 gi|46445494|gb|EAL04762.1| constitutive alternative oxidase [Candida albicans SC5314]
          Length = 379

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 101/154 (65%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE++  VPG V G + H  SLR       WI+ L +EA NERMHL+TFI++ +P
Sbjct: 173 MTRCIFLESIAGVPGSVAGFIRHLHSLRMLTRDKAWIETLHDEAYNERMHLLTFIKIGKP 232

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---- 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +YT  + +L++ +    
Sbjct: 233 SWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTYTHLIDELDDPNKLPD 292

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+  P P IA+ YW  L P+S+ +D+++ IRADE
Sbjct: 293 FQKLPIPNIAVQYWPELTPESSFKDLILRIRADE 326


>gi|150864598|ref|XP_001383483.2| Alternative oxidase, mitochondrial precursor (SHAM-sensitive
           terminal oxidase) (STO1) [Scheffersomyces stipitis CBS
           6054]
 gi|158518684|sp|Q9P414.2|AOX_PICST RecName: Full=Alternative oxidase, mitochondrial; AltName:
           Full=SHAM-sensitive terminal oxidase; Flags: Precursor
 gi|149288858|gb|AAF97475.2| SHAM-sensitive terminal oxidase [Scheffersomyces stipitis]
 gi|149385854|gb|ABN65454.2| Alternative oxidase, mitochondrial precursor (SHAM-sensitive
           terminal oxidase) (STO1) [Scheffersomyces stipitis CBS
           6054]
          Length = 357

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 4/153 (2%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPG V   + H  SLR  +    WI+ LL+EA NERMHL+TFI++ +P
Sbjct: 152 LTRCIFLESIAGVPGAVASFIRHLHSLRLLKRDKAWIETLLDEAFNERMHLLTFIKIGKP 211

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SF 163
            W+ R +++  QGVF N +FL YLA+PK  HR VGYLEEEAV++YT F+ +L++G    F
Sbjct: 212 SWFTRTIIYVGQGVFCNLFFLFYLANPKYCHRFVGYLEEEAVSTYTHFVHELQSGKLPKF 271

Query: 164 ENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           EN   P IA  YW  L  +S++ D+++ IRADE
Sbjct: 272 ENIKIPTIAWQYWPELTENSSMLDLILRIRADE 304


>gi|238878670|gb|EEQ42308.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 379

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 101/154 (65%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE++  VPG V G + H  SLR       WI+ L +EA NERMHL+TFI++ +P
Sbjct: 173 MTRCIFLESIAGVPGSVAGFVRHLHSLRMLTRDKAWIETLHDEAYNERMHLLTFIKIGKP 232

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---- 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +YT  + +L++ +    
Sbjct: 233 SWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTYTHLIDELDDPNKLPD 292

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+  P P IA+ YW  L P+S+ +D+++ IRADE
Sbjct: 293 FQKLPIPNIAVQYWPELTPESSFKDLILRIRADE 326


>gi|51701296|sp|O93853.1|AOX1_CANAL RecName: Full=Alternative oxidase 1, mitochondrial; Flags:
           Precursor
 gi|4090947|gb|AAC98914.1| alternative oxidase [Candida albicans]
          Length = 379

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 101/154 (65%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE++  VPG V G + H  SLR       WI+ L +EA NERMHL+TFI++ +P
Sbjct: 173 MTRCIFLESIAGVPGSVAGFVRHLHSLRMLTRDKAWIETLHDEAYNERMHLLTFIKIGKP 232

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---- 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +YT  + +L++ +    
Sbjct: 233 SWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTYTHLIDELDDPNKLPD 292

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+  P P IA+ YW  L P+S+ +D+++ IRADE
Sbjct: 293 FQKLPIPNIAVQYWPELTPESSFKDLILRIRADE 326


>gi|255728095|ref|XP_002548973.1| alternative oxidase 1, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240133289|gb|EER32845.1| alternative oxidase 1, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 379

 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 99/154 (64%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE+V  VPG V G + H  SLR       WI++L +EA NERMHL+TFI++ +P
Sbjct: 173 MTRVIFLESVAGVPGSVAGFIRHLHSLRMLTRDKAWIESLQDEAYNERMHLLTFIKIGKP 232

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GS 162
            W+ R +++  QGVF N +F  YL +P+  HR VGYLEEEAV +YT  L +L+      +
Sbjct: 233 SWFTRTIIYIGQGVFTNIFFFLYLMNPRYCHRFVGYLEEEAVRTYTHLLDELDKPGKLPN 292

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+N   P IA+DYW  L  +S+ +D+V +IRADE
Sbjct: 293 FQNMQIPTIAVDYWPSLSEESSFKDLVAIIRADE 326


>gi|391865057|gb|EIT74348.1| alternative oxidase AlxA, putative [Aspergillus oryzae 3.042]
          Length = 320

 Score =  152 bits (383), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 121/204 (59%), Gaps = 22/204 (10%)

Query: 14  TKHHKPENYRDKFAYWTVQALKF------------------PTHLFFQRRHMCHAMLLET 55
           T H   +++ D+ A  TV+ L++                  P     + + +   + LE+
Sbjct: 73  TAHRNAKDWSDRMALGTVRFLRWGMDLVTGYHHSHPRDAHSPRFRMTEEKWITRFIFLES 132

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V  VPGMV  ML H KSLR+     GWI+ LLEEA NERMHL+TF++L++P      +V 
Sbjct: 133 VAGVPGMVAAMLRHLKSLRRMRRDYGWIETLLEEAYNERMHLLTFLKLSQPGPAMYFMVL 192

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIA 172
           A Q VFF  + LAYL SP++ HR VGYLEEEAV +YT+ +++L+ G+     N  APA+A
Sbjct: 193 AAQCVFFTGFSLAYLISPRICHRFVGYLEEEAVITYTKAIQELDKGNLPLWSNMEAPAMA 252

Query: 173 IDYWRLPPDS-TLRDVVVVIRADE 195
           I YW++P    ++R +++ +RADE
Sbjct: 253 IKYWQMPEGQRSIRSLLLCVRADE 276


>gi|83774462|dbj|BAE64585.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 310

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 22/204 (10%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLET 55
           T H   +++ D+ A  TV+ L++   L     H                  +   + LE+
Sbjct: 73  TAHRNAKDWSDRMALGTVRFLRWGMDLVTGYHHSHPRDAHSPRFRMTEEKWITRFIFLES 132

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V  VPGMV  ML H KSLR+     GWI+ LLEEA NERMHL+TF++L++P      +V 
Sbjct: 133 VAGVPGMVAAMLRHLKSLRRMRRDYGWIETLLEEAYNERMHLLTFLKLSQPGPAMYFMVL 192

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIA 172
           A Q VFF  + LAYL SP++ HR VGYLEEEAV +YT+ +++L+ G+     N  APA+A
Sbjct: 193 AAQCVFFTGFSLAYLISPRICHRFVGYLEEEAVITYTKAIQELDKGNLPLWSNMEAPAMA 252

Query: 173 IDYWRLPPDS-TLRDVVVVIRADE 195
           I YW++P    ++R +++ +RADE
Sbjct: 253 IKYWQMPEGQRSIRSLLLCVRADE 276


>gi|388853396|emb|CCF53016.1| related to alternative oxidase precursor, mitochondrial [Ustilago
           hordei]
          Length = 417

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 97/148 (65%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LET+  VPGMV     H +SLR  +   GWI  LL++AENERMHL+TF+ LA+P    
Sbjct: 207 IFLETIAGVPGMVAATCRHLQSLRLMKRDKGWIHTLLQDAENERMHLLTFMHLAKPGTIA 266

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
           RA     QGVF+N +F+ YL SP++AHR VG LEEEAV +Y+  L+D++ G     EN P
Sbjct: 267 RAFALLAQGVFYNLFFIFYLFSPRIAHRFVGVLEEEAVLTYSCILEDIKQGRLPEWENVP 326

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IA  YW+L   + L DV+  +RADE
Sbjct: 327 APEIAKHYWQLGDQALLVDVIRAVRADE 354


>gi|344302079|gb|EGW32384.1| inducible alternative oxidase 2 [Spathaspora passalidarum NRRL
           Y-27907]
          Length = 342

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 101/154 (65%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPG V   + H  SLR  +    WI+ LL+EA NERMHL+TFI+L +P
Sbjct: 136 LTRVIFLESIAGVPGFVASFIRHLHSLRLLKRDKAWIETLLDEAYNERMHLLTFIKLGKP 195

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GS 162
            W+ R++++A QGVF N +FL YLA+P+  HR VGYLEEEAV++YT  + +LE       
Sbjct: 196 SWFTRSIIYAGQGVFANIFFLCYLANPRFCHRFVGYLEEEAVSTYTHLVHELETPGKLTG 255

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F +   P IA+ YW  L  +S+ +D+++ IRADE
Sbjct: 256 FNDMKIPEIAVQYWPELTENSSFKDLILRIRADE 289


>gi|322711578|gb|EFZ03151.1| Alternative oxidase [Metarhizium anisopliae ARSEF 23]
          Length = 363

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 106/160 (66%), Gaps = 15/160 (9%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 157 VFLESIAGVPGMVGGMLRHLSSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 216

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN-APA- 168
           + ++   QGVFFNA F+ YL  P++ HR VGYLEEEAV++YT  ++++E+G     A A 
Sbjct: 217 KLMIIGAQGVFFNALFITYLLHPRIVHRFVGYLEEEAVHTYTRAIREIEDGHLPKWADAK 276

Query: 169 ---PAIA---------IDYWRLPP-DSTLRDVVVVIRADE 195
              P IA         + YW +P  + T++D+++ IRADE
Sbjct: 277 FQIPDIAVQGALFSHIVQYWNMPEGNRTMKDLILYIRADE 316


>gi|358400759|gb|EHK50085.1| hypothetical protein TRIATDRAFT_51260 [Trichoderma atroviride IMI
           206040]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H +SLR  +   GWI+ LLEE+ NERMHL+TF+ +  P  + 
Sbjct: 162 VFLESIAGVPGMVGGMLRHLRSLRGMKRDNGWIETLLEESYNERMHLLTFMTMCEPGLFM 221

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + ++   QGVFFN+ F+AYL  PK+ HR VGYLEEEAV++YT  + ++E G       P 
Sbjct: 222 KLMIIGAQGVFFNSLFVAYLLHPKIVHRFVGYLEEEAVHTYTRAIHEIEEGHLPRWTDPK 281

Query: 169 ---PAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW +P    T++D+++ IRADE
Sbjct: 282 FRIPDIAVQYWHMPEGHRTMKDLILYIRADE 312


>gi|344232988|gb|EGV64861.1| hypothetical protein CANTEDRAFT_104081 [Candida tenuis ATCC 10573]
          Length = 312

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 113/213 (53%), Gaps = 23/213 (10%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------- 46
           KA+L      H  P    DK A   +Q  +     F   +H                   
Sbjct: 49  KAELESISFDHRVPITVSDKIASGAIQTFRSCFDFFTGYKHPTKGVSYEGTRFEMTESKW 108

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  +PGM    + H  SLR  +    WI+ LL+EA NER+HL+TFI L +P
Sbjct: 109 LTRCIFLESVAGIPGMTAAFIRHLHSLRLLKRDKAWIETLLDEAYNERIHLLTFINLGKP 168

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SF 163
            W+ R  +F  QGVF N +F  YL  PK  HR VGYLEEEAV++Y+ F+K+L+ G    F
Sbjct: 169 SWFTRFFIFMGQGVFCNIFFFNYLFFPKFCHRFVGYLEEEAVSTYSHFIKELDAGKLKKF 228

Query: 164 ENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           ++   P +AI Y+  L   ST+RD+++ +RADE
Sbjct: 229 DDMAIPPVAIQYYGTLDEKSTIRDLILCVRADE 261


>gi|358378712|gb|EHK16393.1| hypothetical protein TRIVIDRAFT_216965 [Trichoderma virens Gv29-8]
          Length = 359

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 100/151 (66%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR  +   GWI+ LLEE+ NERMHL+TF+ +  P  + 
Sbjct: 162 VFLESIAGVPGMVGGMLRHLSSLRGMKRDNGWIETLLEESYNERMHLLTFMTMCEPGLFM 221

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           + ++   QGVFFN+ F+AYL  PK+ HR VGYLEEEAV++YT  + ++E G       P 
Sbjct: 222 KLMIIGAQGVFFNSLFVAYLLHPKIVHRFVGYLEEEAVHTYTRAIAEIEEGHLPKWADPK 281

Query: 171 -----IAIDYWRLPP-DSTLRDVVVVIRADE 195
                IA+ YW +P  + T++D+++ IRADE
Sbjct: 282 FRIPDIAVQYWNMPEGNRTMKDLILYIRADE 312


>gi|71747778|ref|XP_822944.1| alternative oxidase [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|51338731|sp|Q26710.2|AOX_TRYBB RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|17129642|dbj|BAB72245.1| alternative oxidase [Trypanosoma brucei brucei]
 gi|17129644|dbj|BAB72256.1| alternative oxidase [Trypanosoma brucei brucei]
 gi|45825838|gb|AAB46424.2| alternative oxidase [Trypanosoma brucei brucei]
 gi|62701577|dbj|BAD95615.1| alternative oxidase [Trypanosoma brucei gambiense]
 gi|70832612|gb|EAN78116.1| alternative oxidase [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|71609888|dbj|BAE16578.1| alternative oxidase [Trypanosoma evansi]
 gi|108743274|dbj|BAE95411.1| alternative oxidase [Trypanosoma brucei gambiense]
 gi|108743276|dbj|BAE95412.1| alternative oxidase [Trypanosoma brucei rhodesiense]
 gi|261332779|emb|CBH15774.1| alternative oxidase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 329

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 106/190 (55%), Gaps = 10/190 (5%)

Query: 16  HHKPENYRDKFAYWTVQALK--FPTHLFF------QRRHMCHAMLLETVGAVPGMVGGML 67
           H KP    D  AY +V+  +  F T   +      + + +   + LETV  VPGMVGGML
Sbjct: 77  HKKPNGLVDTLAYRSVRTCRWLFDTFSLYRFGSITESKVISRCLFLETVAGVPGMVGGML 136

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H  SLR      GWI  LL EAENERMHLMTFIEL +P    R  +   Q + +    +
Sbjct: 137 RHLSSLRYMTRDKGWINTLLVEAENERMHLMTFIELRQPGLPLRVSIIITQAIMYLFLLV 196

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYWRLPPDSTLR 185
           AY+ SP+  HR VGYLEEEAV +YT  ++ ++ G         P +A  YW L  ++T R
Sbjct: 197 AYVISPRFVHRFVGYLEEEAVITYTGVMRAIDEGRLRPTKNDVPEVARVYWNLSKNATFR 256

Query: 186 DVVVVIRADE 195
           D++ VIRADE
Sbjct: 257 DLINVIRADE 266


>gi|342871326|gb|EGU73992.1| hypothetical protein FOXB_15497 [Fusarium oxysporum Fo5176]
          Length = 345

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 10/155 (6%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 144 IFLESIAGVPGMVGGMLRHLSSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 203

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           + ++   QGVFFN  F+ YL SPK+ HR VGYLEEEAV++YT  +K++E G     + P+
Sbjct: 204 KVMIIGAQGVFFNGLFVCYLFSPKIVHRFVGYLEEEAVHTYTRCIKEIEEGHLPKWSDPS 263

Query: 169 ---PAIAIDYWRLPPDS-----TLRDVVVVIRADE 195
              P IAI  + L   S     T++D+++ IRADE
Sbjct: 264 FRIPDIAIQVFGLHLQSTFGVHTMKDLILYIRADE 298


>gi|406601822|emb|CCH46595.1| Alternative oxidase, mitochondrial [Wickerhamomyces ciferrii]
          Length = 352

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 9/187 (4%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           VT + KP++   K   W     +     +  R      + LE++  VPGMV   + H  S
Sbjct: 116 VTGYKKPKDVNGKLQTWEGTRYEMTEEKWLTR-----VIFLESIAGVPGMVAAFVRHLHS 170

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           +R  +    WI+ LL+EA NERMHL+TF++L  P W+ R +++  QGVF N +FL YL  
Sbjct: 171 IRLLKRDKAWIETLLDEAYNERMHLLTFMKLGNPSWFTRLIIYVGQGVFCNLFFLIYLIR 230

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYW-RLPPDSTLRDVV 188
           P+  HR VGYLEEEAV++YT  +KDL+      F+N   P IA  YW  L  +ST RD+V
Sbjct: 231 PRYCHRFVGYLEEEAVSTYTHLIKDLDAKRLPRFDNVKLPEIAWVYWTSLDENSTFRDLV 290

Query: 189 VVIRADE 195
           + +RADE
Sbjct: 291 LRVRADE 297


>gi|241949571|ref|XP_002417508.1| (constitutive) alternative oxidase 1, mitochondrial precursor,
           putative [Candida dubliniensis CD36]
 gi|223640846|emb|CAX45161.1| (constitutive) alternative oxidase 1, mitochondrial precursor,
           putative [Candida dubliniensis CD36]
          Length = 389

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 99/154 (64%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE++  VPG V G + H  SLR       WI+ L +EA NERMHL+TFI++ +P
Sbjct: 183 LTRCIFLESIAGVPGSVAGFVRHLHSLRMLTRDKAWIETLHDEAYNERMHLLTFIKIGKP 242

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---- 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +YT  + +L + +    
Sbjct: 243 SWFTRSIIYIGQGVFTNIFFLVYLMNPRYCHRFVGYLEEEAVRTYTHLIHELNDPNKLPD 302

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FE    P IA+ YW  L PDS+ +D+++ IRADE
Sbjct: 303 FEKLSIPTIAVQYWPELTPDSSFKDLILRIRADE 336


>gi|238492127|ref|XP_002377300.1| alternative oxidase AlxA, putative [Aspergillus flavus NRRL3357]
 gi|220695794|gb|EED52136.1| alternative oxidase AlxA, putative [Aspergillus flavus NRRL3357]
          Length = 320

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 22/204 (10%)

Query: 14  TKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------------MCHAMLLET 55
           T H    ++ D+ A  TV+ L++   L     H                  +   + LE+
Sbjct: 73  TAHRNAIDWSDRMALGTVRFLRWGMDLVTGYHHSHPRDAHSPRFRMTEEKWITRFIFLES 132

Query: 56  VGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVF 115
           V  VPGMV  ML H KSLR+     GWI+ LLEEA NERMHL+TF++L++P      +V 
Sbjct: 133 VAGVPGMVAAMLRHLKSLRRMRRDYGWIETLLEEAYNERMHLLTFLKLSQPGPAMYFMVL 192

Query: 116 AVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAPAPAIA 172
           A Q VFF  + LAYL SP++ HR VGYLEEEAV +YT+ +++L+ G+     N  APA+A
Sbjct: 193 AAQCVFFTGFSLAYLISPRICHRFVGYLEEEAVITYTKAIQELDKGNLPLWSNMEAPAMA 252

Query: 173 IDYWRLPPDS-TLRDVVVVIRADE 195
           I YW++P    ++R +++ +RADE
Sbjct: 253 IKYWQMPEGQRSIRSLLLCVRADE 276


>gi|68465140|ref|XP_723269.1| inducible alternative oxidase 2 [Candida albicans SC5314]
 gi|46445296|gb|EAL04565.1| inducible alternative oxidase 2 [Candida albicans SC5314]
          Length = 365

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  VPG V G L H  SLR       WI+ LL+EA NERMHL+TFI++ +P
Sbjct: 159 LTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAYNERMHLLTFIKIGKP 218

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDL----ENGS 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +Y+  L +L    +  +
Sbjct: 219 SWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTYSHLLDELAVPGKLPA 278

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FE    P +A+ YW  L P S+ +D+++ IRADE
Sbjct: 279 FETMKIPEVAVQYWPELTPKSSFKDLILRIRADE 312


>gi|51701359|sp|Q9UV71.1|AOX2_CANAL RecName: Full=Alternative oxidase 2, mitochondrial; Flags:
           Precursor
 gi|6650742|gb|AAF21993.1|AF116872_1 alternative oxidase [Candida albicans]
          Length = 365

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  VPG V G L H  SLR       WI+ LL+EA NERMHL+TFI++ +P
Sbjct: 159 LTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAYNERMHLLTFIKIGKP 218

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDL----ENGS 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +Y+  L +L    +  +
Sbjct: 219 SWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTYSHLLDELAVPGKLPA 278

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FE    P +A+ YW  L P S+ +D+++ IRADE
Sbjct: 279 FETMKIPEVAVQYWPELTPKSSFKDLILRIRADE 312


>gi|238878671|gb|EEQ42309.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 365

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  VPG V G L H  SLR       WI+ LL+EA NERMHL+TFI++ +P
Sbjct: 159 LTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAYNERMHLLTFIKIGKP 218

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDL----ENGS 162
            W+ R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +Y+  L +L    +  +
Sbjct: 219 SWFTRSIIYVGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTYSHLLDELAVPGKLPA 278

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FE    P +A+ YW  L P S+ +D+++ IRADE
Sbjct: 279 FETMKIPEVAVQYWPELTPKSSFKDLILRIRADE 312


>gi|116310409|emb|CAH67418.1| OSIGBa0143N19.12 [Oryza sativa Indica Group]
          Length = 125

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/95 (70%), Positives = 82/95 (86%)

Query: 101 IELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
           +E+A+P+WYER LV A+Q VFFN YF+ YL SPKLAHR+VGYLEEEA++SYTE+LKD+E 
Sbjct: 1   MEVAKPRWYERTLVLAIQRVFFNTYFIGYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIEA 60

Query: 161 GSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           G  EN PAP IAIDYWRLP  +TL+DVVVV+RA+E
Sbjct: 61  GKIENVPAPPIAIDYWRLPTGATLKDVVVVVRANE 95


>gi|14599474|gb|AAK70935.1| alternative oxidase 1a [Mangifera indica]
          Length = 78

 Score =  149 bits (376), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/78 (88%), Positives = 74/78 (94%)

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF+E+A+P+WYERALVF VQGVF
Sbjct: 1   MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFMEVAQPRWYERALVFTVQGVF 60

Query: 122 FNAYFLAYLASPKLAHRI 139
           FNAYFL YL SPK AHR+
Sbjct: 61  FNAYFLGYLISPKFAHRM 78


>gi|317157513|ref|XP_001825718.2| alternative oxidase [Aspergillus oryzae RIB40]
          Length = 226

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 103/149 (69%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE+V  VPGMV  ML H KSLR+     GWI+ LLEEA NERMHL+TF++L++P    
Sbjct: 44  IFLESVAGVPGMVAAMLRHLKSLRRMRRDYGWIETLLEEAYNERMHLLTFLKLSQPGPAM 103

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
             +V A Q VFF  + LAYL SP++ HR VGYLEEEAV +YT+ +++L+ G+     N  
Sbjct: 104 YFMVLAAQCVFFTGFSLAYLISPRICHRFVGYLEEEAVITYTKAIQELDKGNLPLWSNME 163

Query: 168 APAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           APA+AI YW++P    ++R +++ +RADE
Sbjct: 164 APAMAIKYWQMPEGQRSIRSLLLCVRADE 192


>gi|68464763|ref|XP_723459.1| hypothetical protein CaO19.4773 [Candida albicans SC5314]
 gi|46445493|gb|EAL04761.1| hypothetical protein CaO19.4773 [Candida albicans SC5314]
          Length = 241

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 79/188 (42%), Positives = 110/188 (58%), Gaps = 17/188 (9%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           V K + PE +  K   W +   K+ T   F          LE+V  VPG V G L H  S
Sbjct: 13  VPKTNNPEEF--KGTRWEMTEGKWLTRCIF----------LESVAGVPGSVAGFLRHLHS 60

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR       WI+ LL+EA NERMHL+TFI++ +P W+ R++++  QGVF N +FL YL +
Sbjct: 61  LRMLRRDKAWIETLLDEAYNERMHLLTFIKIGKPSWFTRSIIYVGQGVFTNVFFLLYLLN 120

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDL----ENGSFENAPAPAIAIDYW-RLPPDSTLRDV 187
           P+  HR VGYLEEEAV +Y+  L +L    +  +FE    P +A+ YW  L P S+ +D+
Sbjct: 121 PRYCHRFVGYLEEEAVRTYSHLLDELAVPGKLPAFETMKIPEVAVQYWPELTPKSSFKDL 180

Query: 188 VVVIRADE 195
           ++ IRADE
Sbjct: 181 ILRIRADE 188


>gi|62241309|dbj|BAD93712.1| alternative oxidase 1a [Candida maltosa]
          Length = 371

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 97/154 (62%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE V  +PG V G++ H  SLR       WI+ L +EA NERMHL+TFI++ +P
Sbjct: 165 MTRCIFLEAVAGIPGSVAGLIRHLHSLRMLTRDKAWIQTLNDEAYNERMHLLTFIKIGKP 224

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDL----ENGS 162
            W+ R +++  QGVF N +F+ YL +PK  HR VGYLEEEAV +YT  L +L    +   
Sbjct: 225 SWFTRTIIYVGQGVFTNLFFMVYLMNPKYCHRFVGYLEEEAVRTYTHLLAELNVPGKLPD 284

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FE    P IA+ YW  L P+S+ +D+++ IRADE
Sbjct: 285 FEKMVIPTIAVQYWDELSPESSFKDLILRIRADE 318


>gi|254571053|ref|XP_002492636.1| hypothetical protein [Komagataella pastoris GS115]
 gi|238032434|emb|CAY70457.1| Hypothetical protein PAS_chr3_0408 [Komagataella pastoris GS115]
 gi|328353360|emb|CCA39758.1| hypothetical protein PP7435_Chr3-0805 [Komagataella pastoris CBS
           7435]
          Length = 362

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 26/221 (11%)

Query: 1   PWETYKADLSINVT-KHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------- 46
           P   Y+ DL   +  +H +P   RDK A+  +++L+     F   +H             
Sbjct: 87  PHHGYRQDLMEKIHYEHREPTLIRDKLAFGLMRSLRVCFDFFSGYKHPKTKEGLEKLTPA 146

Query: 47  ---------MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHL 97
                    +   ++LE++  VPG V   L H +SLR  +    +I+ L +EA NERMHL
Sbjct: 147 TYQMTPEKWLTRFIILESIAGVPGSVASFLRHLQSLRLLKRDKAFIQTLQDEAYNERMHL 206

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           +TF+E+ +P  + + L++A QGVF N +F  Y+ +P   HR VGYLEEEAV +YT  L+D
Sbjct: 207 LTFLEIGKPGPFMKVLLYASQGVFCNLFFFTYMLAPNACHRFVGYLEEEAVYTYTTCLED 266

Query: 158 LENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +E G     E+   P IA DYW L  D+ +RD++  IRADE
Sbjct: 267 IERGLLPDIEHFKVPKIAKDYWHLSEDAKMRDLISYIRADE 307


>gi|93008053|gb|ABE97458.1| mitochondrial alternative oxidase [Komagataella pastoris]
          Length = 362

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 26/221 (11%)

Query: 1   PWETYKADLSINVT-KHHKPENYRDKFAYWTVQALKFPTHLFFQRRH------------- 46
           P   Y+ DL   +  +H +P   RDK A+  +++L+     F   +H             
Sbjct: 87  PHHGYRQDLMEKIHYEHREPTLIRDKLAFGLMRSLRVCFDFFSGYKHPKTKEGLEKLTPA 146

Query: 47  ---------MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHL 97
                    +   ++LE++  VPG V   L H +SLR  +    +I+ L +EA NERMHL
Sbjct: 147 TYQMTPEKWLTRFIILESIAGVPGSVASFLRHLQSLRLLKRDKAFIQTLQDEAYNERMHL 206

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           +TF+E+ +P  + + L++A QGVF N +F  Y+ +P   HR VGYLEEEAV +YT  L+D
Sbjct: 207 LTFLEIGKPGPFMKVLLYASQGVFCNLFFFTYMLAPNACHRFVGYLEEEAVYTYTTCLED 266

Query: 158 LENG---SFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +E G     E+   P IA DYW L  D+ +RD++  IRADE
Sbjct: 267 IERGLLPDIEHFKVPKIAKDYWHLSEDAKMRDLISYIRADE 307


>gi|219114258|ref|XP_002176300.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402703|gb|EEC42692.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 218

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 16/205 (7%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALK--FPTHLFFQRRHMCHAMLL------ETVG 57
           +ADL I +T H KPE  RD+ AY  V+A++  F     +  + +   M+L      ET+ 
Sbjct: 7   QADLDIELT-HTKPEGIRDRLAYNAVKAVRWSFDKMTGWNYKSITQDMVLQRVIYLETIA 65

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
           AVPGMV  ++ H +SLR F+  GG ++  L+EA NERMHL++F+ +  P    RA V   
Sbjct: 66  AVPGMVAAIVRHFRSLRSFQRDGGMMQMFLDEANNERMHLLSFVRMKDPSMLFRAAVIGG 125

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN-------APAPA 170
           Q  F +A+ L Y+ SPK  HR VGY+EEEA  +YT+ +K +E+   +N         AP+
Sbjct: 126 QAGFGSAFLLLYVISPKFCHRFVGYVEEEACTTYTKIIKAIEDAPEDNELAAWRTQLAPS 185

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           IA  YW+L    T+ +++  +RADE
Sbjct: 186 IARSYWKLGEYGTVLELMYAVRADE 210


>gi|118384865|ref|XP_001025571.1| Alternative oxidase family protein [Tetrahymena thermophila]
 gi|89307338|gb|EAS05326.1| Alternative oxidase family protein [Tetrahymena thermophila SB210]
          Length = 322

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 21/211 (9%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALK------------FP----THLFFQRRHMCH 49
           K D+      H KP+N  D+ +++ +Q+++            FP    +    +R  +  
Sbjct: 82  KEDVENVQITHFKPKNIGDRLSHYLIQSMRLGFDVMSGYKKVFPWQQKSGELTERGWLNR 141

Query: 50  AMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWY 109
            + LETV  VPG V  M  H +SLR+ E   GWI  LLEEAENERMHL+TF+++ +P   
Sbjct: 142 MVFLETVAGVPGFVAAMHRHLRSLRRMERDYGWIHVLLEEAENERMHLLTFLKVQKPTLL 201

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLK--DLENGSF---E 164
            R  V + Q  +   + L Y   P++ HRIVGYLEEEAV +YT  ++  + EN S    +
Sbjct: 202 FRLGVISAQFNYVLMFGLLYQFFPRVCHRIVGYLEEEAVKTYTHCIEVINQENSSISHWK 261

Query: 165 NAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
              AP IAIDYWRLP ++T+ DV+  IR DE
Sbjct: 262 TKKAPQIAIDYWRLPENATMEDVIYAIRKDE 292


>gi|40313538|dbj|BAD06177.1| alternative oxidase [Cryptosporidium parvum]
          Length = 335

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 13/196 (6%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   +++ H     C  ++ LETV  VPGMV
Sbjct: 123 NVQKTHLCPNGFKDKMSYYLVIALRKSFDLLTRYKKGHNEYQWCRRIIFLETVAGVPGMV 182

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL-ARPQWYERALVFAVQGVFF 122
           G ML H  SLRK +   GWI  LLEEAENERMHL+  ++L  +P    R  V   Q  F 
Sbjct: 183 GAMLRHFSSLRKMKRDNGWIHTLLEEAENERMHLLISLQLINKPSILTRVSVIGTQFAFL 242

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLP 179
             Y + Y+ SPK +HR VGYLEEEAV++YT  +++++ G    FE   AP  A  Y+ LP
Sbjct: 243 IFYTVFYIISPKYSHRFVGYLEEEAVSTYTHLIEEIDKGLLPGFER-KAPKFASVYYGLP 301

Query: 180 PDSTLRDVVVVIRADE 195
            D+T+RD+ + +R DE
Sbjct: 302 EDATIRDLFLAMRRDE 317


>gi|66359376|ref|XP_626866.1| AOX1,alternative oxidase, possible fungal or bacterial origin, 2
           transmembrane regions [Cryptosporidium parvum Iowa II]
 gi|35375829|gb|AAQ84544.1| alternative oxidase [Cryptosporidium parvum]
 gi|46228123|gb|EAK89022.1| AOX1,alternative oxidase, possible fungal or bacterial origin, 2
           transmembrane regions [Cryptosporidium parvum Iowa II]
          Length = 335

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 117/196 (59%), Gaps = 13/196 (6%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   +++ H     C  ++ LETV  VPGMV
Sbjct: 123 NVQKTHLCPNGFKDKMSYYLVIALRKSFDLLTRYKKGHNEYQWCRRIIFLETVAGVPGMV 182

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL-ARPQWYERALVFAVQGVFF 122
           G ML H  SLRK +   GWI  LLEEAENERMHL+  ++L  +P    R  V   Q  F 
Sbjct: 183 GAMLRHFSSLRKMKRDNGWIHTLLEEAENERMHLLISLQLINKPSILTRVSVIGTQFAFL 242

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLP 179
             Y + Y+ SPK +HR VGYLEEEAV++YT  +++++ G    FE   AP  A  Y+ LP
Sbjct: 243 IFYTVFYIISPKYSHRFVGYLEEEAVSTYTHLIEEIDKGLLPGFER-KAPKFASVYYGLP 301

Query: 180 PDSTLRDVVVVIRADE 195
            D+T+RD+ + +R DE
Sbjct: 302 EDATIRDLFLAMRRDE 317


>gi|67595330|ref|XP_665993.1| alternative oxidase [Cryptosporidium hominis TU502]
 gi|35375840|gb|AAQ84545.1| alternative oxidase [Cryptosporidium parvum]
 gi|54656887|gb|EAL35765.1| alternative oxidase [Cryptosporidium hominis]
          Length = 335

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 116/196 (59%), Gaps = 13/196 (6%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   + + H     C  ++ LETV  VPGMV
Sbjct: 123 NVQKTHLCPNGFKDKMSYYLVIALRKSFDLLTRYNKGHNEYQWCRRIIFLETVAGVPGMV 182

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL-ARPQWYERALVFAVQGVFF 122
           G ML H  SLRK +   GWI  LLEEAENERMHL+  ++L  +P    R  V   Q  F 
Sbjct: 183 GAMLRHFSSLRKMKRDNGWIHTLLEEAENERMHLLISLQLINKPSILTRVSVIGTQFAFL 242

Query: 123 NAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLP 179
             Y + Y+ SPK +HR VGYLEEEAV++YT  +++++ G    FE   AP  A  Y+ LP
Sbjct: 243 IFYTIFYIISPKYSHRFVGYLEEEAVSTYTHLIEEIDKGLLPGFE-KKAPKFASVYYGLP 301

Query: 180 PDSTLRDVVVVIRADE 195
            D+T+RD+ + +R DE
Sbjct: 302 EDATIRDLFLAMRRDE 317


>gi|397914094|gb|AFO70098.1| alternative oxidase, partial [Fusarium pseudocircinatum]
          Length = 230

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 96/143 (67%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           VQ +++    +   + +   + LE+V  VPGMVGGML H  SLR+ +   GWI+ LLEE+
Sbjct: 74  VQCVQWIMGTWANMKKLIRFIFLESVAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEES 133

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
            NERMHL+TF+++  P W+ + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++
Sbjct: 134 YNERMHLLTFMKMCEPGWFMKMMIIGAQGVFFNSLFVSYLVSPKIVHRFVGYLEEEAVHT 193

Query: 151 YTEFLKDLENGSFENAPAPAIAI 173
           YT  +K++E+G+      P   I
Sbjct: 194 YTRCIKEIEDGNLPKWSDPKFQI 216


>gi|358060729|dbj|GAA93500.1| hypothetical protein E5Q_00141 [Mixia osmundae IAM 14324]
          Length = 401

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 2/147 (1%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LET+  VPG    +L H KSLR  E  GGWI  LL+E+ENER+HL +F+E+ +P  + 
Sbjct: 190 IFLETIAGVPGSAAAILRHLKSLRTMERDGGWIHTLLQESENERIHLFSFLEITKPGRFM 249

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPA 168
           R +  A QGVF +A+ LAY+ SP++ HR VG LEE+AV +YT  + +++ G     +  A
Sbjct: 250 RLMTMAAQGVFTSAFALAYVISPRICHRFVGKLEEQAVLTYTLAIDEIKAGRLPEFDRKA 309

Query: 169 PAIAIDYWRLPPDSTLRDVVVVIRADE 195
           P IAI+YWR+ P +T  D++  IRADE
Sbjct: 310 PEIAINYWRMQPAATFLDMLYQIRADE 336


>gi|397914084|gb|AFO70093.1| alternative oxidase, partial [Fusarium pseudocircinatum]
          Length = 230

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 96/143 (67%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           VQ +++    +   + +   + LE+V  VPGMVGGML H  SLR+ +   GWI+ LLEE+
Sbjct: 74  VQCVQWIMGTWANIKKLIRFIFLESVAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEES 133

Query: 91  ENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
            NERMHL+TF+++  P W+ + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++
Sbjct: 134 YNERMHLLTFMKMCEPGWFMKMMIIGAQGVFFNSLFVSYLVSPKIVHRFVGYLEEEAVHT 193

Query: 151 YTEFLKDLENGSFENAPAPAIAI 173
           YT  +K++E+G+      P   I
Sbjct: 194 YTRCIKEIEDGNLPKWSDPKFQI 216


>gi|241949569|ref|XP_002417507.1| alternative oxidase 2, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
 gi|223640845|emb|CAX45160.1| alternative oxidase 2, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
          Length = 366

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 97/154 (62%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  VPG V G L H  SLR       WI+ LL+EA NERMHL+TFI++ +P
Sbjct: 160 LTRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAYNERMHLLTFIKIGKP 219

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDL----ENGS 162
            W  R++++  QGVF N +FL YL +P+  HR VGYLEEEAV +Y+  L ++    +  S
Sbjct: 220 SWLTRSIIYIGQGVFTNVFFLLYLLNPRYCHRFVGYLEEEAVRTYSHLLDEMAIPGKLPS 279

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           FE    P +AI YW  L   S+ +D+++ IRADE
Sbjct: 280 FETMKIPEVAIQYWPELTSKSSFKDLILRIRADE 313


>gi|448091410|ref|XP_004197324.1| Piso0_004571 [Millerozyma farinosa CBS 7064]
 gi|448095975|ref|XP_004198355.1| Piso0_004571 [Millerozyma farinosa CBS 7064]
 gi|359378746|emb|CCE85005.1| Piso0_004571 [Millerozyma farinosa CBS 7064]
 gi|359379777|emb|CCE83974.1| Piso0_004571 [Millerozyma farinosa CBS 7064]
          Length = 341

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 116/201 (57%), Gaps = 14/201 (6%)

Query: 4   TYKADLSIN-----VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGA 58
           TY   L+I      VT + KP+   +K       A K   +   + + M   + LE+V  
Sbjct: 93  TYNMILAIRRTFDFVTGYKKPQTPEEK-----EHAFKGTRYEMTESKWMTRVIFLESVAG 147

Query: 59  VPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQ 118
           VPGMV   + H  SLR       WI+ LL+EA NERMHL+TF++L +P W+ + +++A Q
Sbjct: 148 VPGMVAAFIRHLHSLRLLRRDKAWIETLLDEAYNERMHLLTFMKLGKPSWFTKLIIYAGQ 207

Query: 119 GVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDY 175
           GVF N +F +YL +P+  HR VGYLEEEAV++YT  L +LE G    F++   P I+  Y
Sbjct: 208 GVFCNMFFFSYLLNPRYCHRFVGYLEEEAVSTYTHLLDELEAGKLPKFDHIELPEISWHY 267

Query: 176 W-RLPPDSTLRDVVVVIRADE 195
           W  L   S+  D+V ++RADE
Sbjct: 268 WGDLNEKSSFYDLVSLVRADE 288


>gi|448535195|ref|XP_003870925.1| Aox1 alternative oxidase [Candida orthopsilosis Co 90-125]
 gi|380355281|emb|CCG24798.1| Aox1 alternative oxidase [Candida orthopsilosis]
          Length = 370

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 98/154 (63%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE++  VPG V   L    SLR  +    WI+ L +EA NERMHL+TFI++ +P
Sbjct: 164 MTRVIFLESIAGVPGSVASFLRTLHSLRLLKRDKAWIETLQDEAYNERMHLLTFIKIGQP 223

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GS 162
            W+ + +++  QGVF N +F  YLA+PK  HR VGYLEEEAV +YT  L +LE+      
Sbjct: 224 SWFTKTIIYLGQGVFTNLFFFCYLANPKYCHRFVGYLEEEAVRTYTHLLDELEDPNKLKD 283

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+N   P IA++YW  L  +S+ +D+++ IRADE
Sbjct: 284 FQNMLIPTIAVNYWPSLTEESSFKDLILRIRADE 317


>gi|348681989|gb|EGZ21805.1| hypothetical protein PHYSODRAFT_247287 [Phytophthora sojae]
          Length = 297

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 111/180 (61%), Gaps = 13/180 (7%)

Query: 16  HHKPENYRDKFAYWTVQALKF----------PTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           HH      ++ AY  V+AL+           P     ++  +   + LE+V  VPGMVGG
Sbjct: 118 HHPIVKMHERVAYMAVKALRTGFDVISGYRGPGGAMTEKDWLNRCLFLESVAGVPGMVGG 177

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           ML H +SLR  +   GWI  LLEEAENERMHL+ F+ + +P ++ RALV   QGVFFN +
Sbjct: 178 MLRHLRSLRLLKRDYGWIHTLLEEAENERMHLLIFMNIKQPGYFFRALVVGAQGVFFNGF 237

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDS 182
           FL YL SPK  HR VGYLEEEAV +Y+  L+D+E+G   +++   AP IA  Y++LP D+
Sbjct: 238 FLTYLVSPKTCHRFVGYLEEEAVKTYSCLLQDIEDGHLDAWKEKKAPLIAQTYYKLPEDA 297


>gi|255728097|ref|XP_002548974.1| alternative oxidase 1, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240133290|gb|EER32846.1| alternative oxidase 1, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 361

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           M   + LE+V  VPG V G + H  SLR  +    WI+ L +EA NERMHL+TFI++ +P
Sbjct: 155 MTRCIFLESVAGVPGSVAGFIRHLHSLRMLKRDKAWIETLHDEAYNERMHLLTFIKIGKP 214

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GS 162
            W+ R++++  QGVF N +F  YL +P+  HR VGYLEEEAV +YT  L++L+      +
Sbjct: 215 SWFTRSIIYVGQGVFTNVFFFLYLLNPRYCHRFVGYLEEEAVRTYTHLLEELKEPGKLPN 274

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+    P +A  YW  L  +S+ RD+++ IRADE
Sbjct: 275 FQKMKIPTVAAQYWPELTNESSFRDLILRIRADE 308


>gi|294872126|ref|XP_002766164.1| alternative oxidase, putative [Perkinsus marinus ATCC 50983]
 gi|239866823|gb|EEQ98881.1| alternative oxidase, putative [Perkinsus marinus ATCC 50983]
          Length = 327

 Score =  145 bits (366), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 10/191 (5%)

Query: 15  KHHKPENYRDKFAYWTVQALK-----FPTHLFFQRRHMCHA---MLLETVGAVPGMVGGM 66
           +H KP+  RD  A+  V   +     F  + FF+  +  +A   ++LET+  +PGMV  M
Sbjct: 89  EHLKPKTIRDHLAHSAVWLCRTGYDFFSGYDFFKHDYKMYARRLIVLETIAGIPGMVAAM 148

Query: 67  LLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
             H +SLR+ E   GWI  L+EEAE+ERMHL+    L    W+ R+ + A QG FF  Y 
Sbjct: 149 NRHLRSLRRMERDNGWIPTLIEEAEDERMHLLISQGLVSHGWFLRSFLTAAQGAFFLFYA 208

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYWRLPPDSTL 184
            AY  SP+  HR VGYLEEEA  +YT  ++D+ENG     +  AP  A  Y+ LP D+TL
Sbjct: 209 GAYSVSPRFCHRFVGYLEEEAFKTYTAIVEDVENGQVPEFDRSAPFYAKAYYCLPEDATL 268

Query: 185 RDVVVVIRADE 195
            D ++ +RADE
Sbjct: 269 LDTLICMRADE 279


>gi|3023301|sp|Q00912.1|AOX_HANAN RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|218523|dbj|BAA00641.1| unnamed protein product [Pichia anomala]
 gi|6978940|dbj|BAA90763.1| alternative oxidase [Pichia anomala]
 gi|445371|prf||1909185A alternative oxidase
          Length = 342

 Score =  145 bits (366), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 9/187 (4%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           VT + KP++       W     +     +  R      + LE+V  VPGMV   + H  S
Sbjct: 106 VTGYKKPKDVNGMLKSWEGTRYEMTEEKWLTR-----CIFLESVAGVPGMVAAFIRHLHS 160

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLAS 132
           LR  +    WI+ LL+EA NERMHL+TFI++  P W+ R +++  QGVF N +FL YL  
Sbjct: 161 LRLLKRDKAWIETLLDEAYNERMHLLTFIKIGNPSWFTRFIIYMGQGVFANLFFLVYLIK 220

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWR-LPPDSTLRDVV 188
           P+  HR VGYLEEEAV++YT  +KD+++     F++   P I+  YW  L   ST RD++
Sbjct: 221 PRYCHRFVGYLEEEAVSTYTHLIKDIDSKRLPKFDDVNLPEISWLYWTDLNEKSTFRDLI 280

Query: 189 VVIRADE 195
             IRADE
Sbjct: 281 QRIRADE 287


>gi|116196990|ref|XP_001224307.1| hypothetical protein CHGG_05093 [Chaetomium globosum CBS 148.51]
 gi|88181006|gb|EAQ88474.1| hypothetical protein CHGG_05093 [Chaetomium globosum CBS 148.51]
          Length = 265

 Score =  145 bits (365), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 6/151 (3%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LETV  +PG V G L H  S+R+F+   GWIK LLEE+ NERMHLMTF+ + RP    
Sbjct: 56  VFLETVAGIPGAVAGGLRHLHSIRRFKLDQGWIKTLLEESYNERMHLMTFLAMYRPGRLM 115

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG-----SFEN 165
           R +VFA QG+F+N  F+ YL S    HR+VGYLE+EAV +YT+ L +++ G     +   
Sbjct: 116 RFMVFAAQGIFYNTMFIGYLISLGFCHRLVGYLEDEAVATYTKCLAEMDKGWLPQWTDPG 175

Query: 166 APAPAIAIDYWRLPPD-STLRDVVVVIRADE 195
              P IA+ YW++P    T+RD+++ IRADE
Sbjct: 176 FKIPDIAVQYWKMPEGRRTMRDLILYIRADE 206


>gi|260948572|ref|XP_002618583.1| hypothetical protein CLUG_02042 [Clavispora lusitaniae ATCC 42720]
 gi|238848455|gb|EEQ37919.1| hypothetical protein CLUG_02042 [Clavispora lusitaniae ATCC 42720]
          Length = 332

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 16/194 (8%)

Query: 8   DLSINVTKHHKPEN--YRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           DL     K   PE   +R K   W +   K+ T + F          LE+V  VPGM   
Sbjct: 96  DLVTGYKKPRTPEEKEHRFKGTRWEMTESKWLTRVIF----------LESVAGVPGMTAA 145

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
            L H  SLR  +    WI+ LL+EA NERMHL+TF+++ RP W+ +  VFA QGVF N +
Sbjct: 146 FLRHLHSLRLMKRDKAWIETLLDEAYNERMHLLTFMKIGRPSWFTKVFVFAGQGVFCNLF 205

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYW-RLPPD 181
           FL YL SP+  HR VGYLEEEAV++YT  +++LE      F+    P +A  YW  L   
Sbjct: 206 FLMYLLSPRACHRFVGYLEEEAVSTYTHLIEELEAKRLPKFDGITVPEVAQLYWPELNEK 265

Query: 182 STLRDVVVVIRADE 195
           ST  D++  IRADE
Sbjct: 266 STFLDLIQRIRADE 279


>gi|397914080|gb|AFO70091.1| alternative oxidase, partial [Fusarium solani]
          Length = 236

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 88/123 (71%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 92  IFLESIAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 151

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E+G+      P 
Sbjct: 152 KTMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIEDGNLPKWNDPK 211

Query: 171 IAI 173
             I
Sbjct: 212 FGI 214


>gi|397914078|gb|AFO70090.1| alternative oxidase, partial [Fusarium solani]
          Length = 237

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 88/123 (71%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 93  IFLESIAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 152

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E+G+      P 
Sbjct: 153 KMMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIEDGNLPKWNDPK 212

Query: 171 IAI 173
             I
Sbjct: 213 FGI 215


>gi|448091414|ref|XP_004197325.1| Piso0_004572 [Millerozyma farinosa CBS 7064]
 gi|448095979|ref|XP_004198356.1| Piso0_004572 [Millerozyma farinosa CBS 7064]
 gi|359378747|emb|CCE85006.1| Piso0_004572 [Millerozyma farinosa CBS 7064]
 gi|359379778|emb|CCE83975.1| Piso0_004572 [Millerozyma farinosa CBS 7064]
          Length = 346

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 97/153 (63%), Gaps = 4/153 (2%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  VPGMV   + H  SLR  +    WI+ LL+EA NERMHL+TF++L RP
Sbjct: 141 LTRVIFLESVAGVPGMVAAFIRHLHSLRLLKRDKAWIETLLDEAYNERMHLLTFMKLGRP 200

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---F 163
            W+ + +V+  QGVF N +F AYL +PK  HR VGYLEEEAV++Y+  L +L+ G    F
Sbjct: 201 SWFTKLIVYIGQGVFCNLFFFAYLVNPKYCHRFVGYLEEEAVSTYSHLLDELDAGKLPRF 260

Query: 164 ENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           +    P I+  YW  L   S+  D+V +IRADE
Sbjct: 261 DEVKIPEISWHYWTELNEHSSFHDLVSLIRADE 293


>gi|27650410|emb|CAD33257.1| alternative oxidase [Crocus sativus]
          Length = 156

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 85/110 (77%), Gaps = 1/110 (0%)

Query: 87  LEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH-RIVGYLEE 145
           LEEAENERMHLMTF+E+++P+WYERALV  VQG             PK+    +VGYLEE
Sbjct: 17  LEEAENERMHLMTFMEVSQPRWYERALVMTVQGSLLQCLLPRKPHLPKVCFIGVVGYLEE 76

Query: 146 EAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           EA++SYTEFLK+L+ GS EN PAPAIAIDYWRL   +TLRDVV+V+RADE
Sbjct: 77  EAIHSYTEFLKELDKGSIENVPAPAIAIDYWRLSKSATLRDVVMVVRADE 126


>gi|302411548|ref|XP_003003607.1| alternative oxidase [Verticillium albo-atrum VaMs.102]
 gi|261357512|gb|EEY19940.1| alternative oxidase [Verticillium albo-atrum VaMs.102]
          Length = 334

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 25/202 (12%)

Query: 1   PWETY-KADLSINVTKHHKPENYRD-------KFAYWTVQAL-----------KFPTHLF 41
           P E Y +AD+   V  H  PE + D       + A WT+              K PT   
Sbjct: 84  PHEGYSEADMLAVVPGHRAPETWGDWAAWKFVRVARWTMDRATGLKPEQQVDKKNPTTAV 143

Query: 42  FQRRHMCHA------MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
                +  A      + LE++  VPGMV GML H  SLR+ +   GWI+ LLEE+ NERM
Sbjct: 144 VANEPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLGSLRRMKRDNGWIETLLEESYNERM 203

Query: 96  HLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFL 155
           HL+TF++++ P W+ + ++   QGVFFN  FL+YL SPK+ HR VGYLEEEAV++Y+  +
Sbjct: 204 HLLTFMKMSEPGWFMKVMLIGAQGVFFNGMFLSYLVSPKITHRFVGYLEEEAVHTYSRCI 263

Query: 156 KDLENGSFENAPAPAIAIDYWR 177
           +++E G       P +    W+
Sbjct: 264 REIEEGQLPKWSDPNLTFPTWQ 285


>gi|397914082|gb|AFO70092.1| alternative oxidase, partial [Fusarium solani]
          Length = 237

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 88/123 (71%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMVGGML H  SLR+ +   GWI+ LLEE+ NERMHL+TF+++  P W+ 
Sbjct: 93  IFLESIAGVPGMVGGMLRHLGSLRRMKRDNGWIETLLEESYNERMHLLTFMKMCEPGWFM 152

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           + ++   QGVFFN+ F++YL SPK+ HR VGYLEEEAV++YT  +K++E+G+      P 
Sbjct: 153 KMMIIGAQGVFFNSLFVSYLISPKIVHRFVGYLEEEAVHTYTRCIKEIEDGNLPKWNDPK 212

Query: 171 IAI 173
             I
Sbjct: 213 FGI 215


>gi|354548354|emb|CCE45090.1| hypothetical protein CPAR2_700940 [Candida parapsilosis]
          Length = 370

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 96/154 (62%), Gaps = 5/154 (3%)

Query: 47  MCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARP 106
           +   + LE+V  VPG V   L    SLR       WI+ L +EA NERMHL+TF+++ +P
Sbjct: 164 LTRVIFLESVAGVPGSVASFLRTLHSLRLLRRDKAWIETLQDEAYNERMHLLTFMKIGQP 223

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GS 162
            W+ + +++  QGVF N +F  YLA+PK  HR VGYLEEEAV +YT  L ++E+      
Sbjct: 224 SWFTKTIIYLGQGVFTNLFFFCYLANPKYCHRFVGYLEEEAVRTYTHLLDEMEDPNKLNG 283

Query: 163 FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           F+    P IA++YW  L  DS+ +D+++ IRADE
Sbjct: 284 FQKIQIPTIAVNYWSSLSKDSSFKDLILRIRADE 317


>gi|118384863|ref|XP_001025570.1| Alternative oxidase family protein [Tetrahymena thermophila]
 gi|89307337|gb|EAS05325.1| Alternative oxidase family protein [Tetrahymena thermophila SB210]
          Length = 301

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 21/201 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHL----------------FFQRRHMCHAMLLETVGAV 59
           H +P N+ D+FA + +Q+L++   +                  +R  +   + LETV  V
Sbjct: 75  HLEPANFGDRFANFFIQSLRYGFDIMSGYKKVFPWQEKGAPLTEREWINRILFLETVAGV 134

Query: 60  PGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQG 119
           PG V  M  H +SLR  +   GWI  LLEEAENERMHL+TF+E+ +P +  R  V   Q 
Sbjct: 135 PGFVAAMHRHLRSLRSMKRDYGWIHTLLEEAENERMHLLTFLEVQKPTFLFRTGVILAQY 194

Query: 120 VFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKD-LENGS----FENAPAPAIAID 174
            +   + + Y   P++ HRIVGYLEEEAV +YT  ++  L+ GS    +   PAP I+ID
Sbjct: 195 GYVALFSVLYFFYPRVCHRIVGYLEEEAVKTYTHSIETALKEGSEIHIWLTKPAPKISID 254

Query: 175 YWRLPPDSTLRDVVVVIRADE 195
           YW+L P++ L DV+  +R DE
Sbjct: 255 YWKLSPNACLLDVIYAVRKDE 275


>gi|354548355|emb|CCE45091.1| hypothetical protein CPAR2_700950 [Candida parapsilosis]
          Length = 370

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 111/207 (53%), Gaps = 27/207 (13%)

Query: 16  HHKPENYRDKFAY---------------WTVQALKFPTHLFFQRRH-------MCHAMLL 53
           H KPE   DK AY               + V     P   +   R+       M   + L
Sbjct: 111 HRKPETIGDKIAYHGTMFCRACFDFVTGYKVPKEGEPLDKYVGTRYEMTEGKWMTRVIFL 170

Query: 54  ETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERAL 113
           E++  VPG V   L    SLR  +    WI+ L +EA NERMHL+TFI++ +P W+ + +
Sbjct: 171 ESIAGVPGSVASFLRTLHSLRLLKRDKAWIETLQDEAYNERMHLLTFIKIGQPSWFTKTI 230

Query: 114 VFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN----GSFENAPAP 169
           ++  QGVF N +F  YL +PK  HR VGYLEEEAV +YT  L +L++      F++   P
Sbjct: 231 IYLGQGVFTNLFFFCYLTNPKYCHRFVGYLEEEAVRTYTHLLDELDDPNKLKDFQSMLIP 290

Query: 170 AIAIDYW-RLPPDSTLRDVVVVIRADE 195
            IA++YW  L  +S+ +D+++ IRADE
Sbjct: 291 TIAVNYWPSLSEESSFKDLILRIRADE 317


>gi|50551827|ref|XP_503388.1| YALI0E00814p [Yarrowia lipolytica]
 gi|51701283|sp|Q8J0I8.1|AOX_YARLI RecName: Full=Alternative oxidase, mitochondrial; Flags: Precursor
 gi|27263058|emb|CAD21442.1| alternative oxidase [Yarrowia lipolytica]
 gi|49649257|emb|CAG78967.1| YALI0E00814p [Yarrowia lipolytica CLIB122]
          Length = 353

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GM+ H  SLR       WI++L+EEA NERMHL+TF++L +P    
Sbjct: 154 LFLESIAGVPGMVAGMIRHLHSLRALRRDRAWIESLVEEAYNERMHLLTFLKLQKPSVQM 213

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           R  +   Q +F+N +F++YL SP   HR VGYLEEEAV +YT  L+D++ G      +  
Sbjct: 214 RTGLLIGQIIFYNLFFISYLISPATCHRFVGYLEEEAVITYTRCLEDIDAGRLPELASME 273

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
            P IA  YW +  D T+RD++  +RADE
Sbjct: 274 VPDIARTYWHMEDDCTMRDLIQYVRADE 301


>gi|33327042|gb|AAQ08895.1| SHAM-sensitive alternative terminal oxidase isozyme I [Yarrowia
           lipolytica]
          Length = 341

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 94/148 (63%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GM+ H  SLR       WI++L+EEA NERMHL+TF++L +P    
Sbjct: 142 LFLESIAGVPGMVAGMIRHLHSLRALRRDRAWIESLVEEAYNERMHLLTFLKLQKPSVQM 201

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           R  +   Q +F+N +F++YL SP   HR VGYLEEEAV +YT  L+D++ G      +  
Sbjct: 202 RTGLLIGQIIFYNLFFISYLISPATCHRFVGYLEEEAVITYTRCLEDIDAGRLPELASME 261

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
            P IA  YW +  D T+RD++  +RADE
Sbjct: 262 VPDIARTYWHMEDDCTMRDLIQYVRADE 289


>gi|209880133|ref|XP_002141506.1| alternative oxidase family protein [Cryptosporidium muris RN66]
 gi|209557112|gb|EEA07157.1| alternative oxidase family protein [Cryptosporidium muris RN66]
          Length = 336

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/190 (44%), Positives = 104/190 (54%), Gaps = 10/190 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLF------FQRRHMCHAML-LETVGAVPGMVGGMLL 68
           H  PE   D+ AY +V  L+    L          R  C  ++ LET+  VPGMVG M+ 
Sbjct: 122 HITPETLIDRLAYNSVLFLRKSFDLLTGYKYGHDERKWCRRIVFLETIAGVPGMVGAMVR 181

Query: 69  HCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELAR-PQWYERALVFAVQGVFFNAYFL 127
           H  SLR+ E   GWI  LLEEAENERMHLM  + L   P  + R  V   Q  F   Y L
Sbjct: 182 HLHSLRRMERDYGWIHTLLEEAENERMHLMISLLLRHPPSLFVRLSVLGAQFGFLIYYTL 241

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFE--NAPAPAIAIDYWRLPPDSTLR 185
            Y  SPK  HR VGYLEEEAV +YT  + D++ G      +PAP  A  Y+ LP D+TL+
Sbjct: 242 CYAISPKYCHRFVGYLEEEAVRTYTRLISDIDLGKLPEFTSPAPKYAKLYYGLPKDATLK 301

Query: 186 DVVVVIRADE 195
           DV + +R DE
Sbjct: 302 DVFLAMRRDE 311


>gi|403355071|gb|EJY77103.1| hypothetical protein OXYTRI_01266 [Oxytricha trifallax]
          Length = 275

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 110/191 (57%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHA--------MLLETVGAVPGMVGGML 67
           H +P+N+ DKFA  TV  ++   +    + H            + LE +G VPG+V G  
Sbjct: 41  HREPQNFTDKFALRTVGLMEVIMNALTGKDHQKRTTTQWYNRFIFLEALGIVPGLVAGTA 100

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H +SL   +     I  LLEEAENER HL  F+ L +P    +  + A Q + +N +F+
Sbjct: 101 KHLRSLSSMKPDRAMIHLLLEEAENERTHLFLFMNLRKPGMLIKFGIAAKQFLLWNIFFI 160

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRLPPDSTL 184
           +YL SP   HR VGY+EEE++ +YT FLK +++G+    +N  AP +A DY+ LP D+  
Sbjct: 161 SYLISPYYVHRFVGYMEEESIFNYTMFLKQIDSGNLKELQNMEAPQLAKDYYNLPADAKF 220

Query: 185 RDVVVVIRADE 195
           RD+V+ IRADE
Sbjct: 221 RDMVLSIRADE 231


>gi|146412117|ref|XP_001482030.1| hypothetical protein PGUG_05793 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 347

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 113/192 (58%), Gaps = 19/192 (9%)

Query: 13  VTKHHKPENYRD-----KFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGML 67
           VT + KP N  D     K   W +   K+ T + F          LE++  VPGMV   L
Sbjct: 114 VTGYKKPRNDHDLETGFKGTRWEMTENKWLTRIIF----------LESIAGVPGMVAAFL 163

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H  SLR  +    WI+ LL+EA NERMHL+TFI+L +P W+ R +++  QGVF NA+FL
Sbjct: 164 RHLHSLRLLKRDRAWIETLLDEAYNERMHLLTFIKLGQPSWFTRFIIYVGQGVFCNAFFL 223

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYW-RLPPDST 183
            YL  PK  HR VGY+EEEAV++Y+  + +L+      F++   P +AI YW  L  +ST
Sbjct: 224 CYLMVPKYCHRFVGYIEEEAVSTYSHLVYELDTKKLPKFDHMRVPPVAIQYWTELDENST 283

Query: 184 LRDVVVVIRADE 195
            RD+++ +RADE
Sbjct: 284 FRDLILRVRADE 295


>gi|190349103|gb|EDK41695.2| hypothetical protein PGUG_05793 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 347

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 113/192 (58%), Gaps = 19/192 (9%)

Query: 13  VTKHHKPENYRD-----KFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGML 67
           VT + KP N  D     K   W +   K+ T + F          LE++  VPGMV   L
Sbjct: 114 VTGYKKPRNDHDLETGFKGTRWEMTENKWLTRIIF----------LESIAGVPGMVAAFL 163

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H  SLR  +    WI+ LL+EA NERMHL+TFI+L +P W+ R +++  QGVF NA+FL
Sbjct: 164 RHLHSLRLLKRDRAWIETLLDEAYNERMHLLTFIKLGQPSWFTRFIIYVGQGVFCNAFFL 223

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYW-RLPPDST 183
            YL  PK  HR VGY+EEEAV++Y+  + +L+      F++   P +AI YW  L  +ST
Sbjct: 224 CYLMVPKYCHRFVGYIEEEAVSTYSHLVYELDTKKLPKFDHMRVPPVAIQYWTELDENST 283

Query: 184 LRDVVVVIRADE 195
            RD+++ +RADE
Sbjct: 284 FRDLILRVRADE 295


>gi|443894326|dbj|GAC71674.1| hypothetical protein PANT_5c00016 [Pseudozyma antarctica T-34]
          Length = 468

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/148 (51%), Positives = 96/148 (64%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LET+  VPGMV     H +SLR  +   GWI  +LE+AENERMHL+TF+ELA+P W  
Sbjct: 256 IFLETIAGVPGMVAATCRHLQSLRLMKRDKGWIHTMLEDAENERMHLLTFMELAKPGWIA 315

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
           R      QGVF+N +F+ YL SP++AHR VG LEEEAV +Y+  L DL  G     EN  
Sbjct: 316 RTFALLAQGVFYNFFFVFYLVSPRVAHRFVGVLEEEAVMTYSFILDDLNEGRLPEWENVR 375

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IA  YW+L  D+ L DV+  +RADE
Sbjct: 376 APEIARQYWQLSDDAMLVDVIRAVRADE 403


>gi|145536776|ref|XP_001454110.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421854|emb|CAK86713.1| unnamed protein product [Paramecium tetraurelia]
          Length = 271

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 20/204 (9%)

Query: 12  NVTKHHK-PENYRDKFAYWTVQALK------------FP--THLFFQRRHMCHAMLLETV 56
           NV   HK P  + D+FA+  +Q+++            FP   ++  +++ +   + LETV
Sbjct: 42  NVKIDHKLPLTFGDRFAHLFIQSMRVGFDVLSGYRKVFPWQDNIISEKKWINRVLFLETV 101

Query: 57  GAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFA 116
             VPG V GM  H +SLR  +   GWI  LLEEAENER+HL+TF+ + +P    R  V  
Sbjct: 102 AGVPGFVAGMHRHLRSLRGMKRDLGWIHTLLEEAENERVHLLTFLTIKKPSLIFRTGVIL 161

Query: 117 VQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE-NG----SFENAPAPAI 171
            Q  +   Y +AY+  P++ HRIVGYLEEEAV +YT  ++++E  G    S++  PA   
Sbjct: 162 AQLWYVALYSVAYMIQPRVCHRIVGYLEEEAVKTYTHMIEEIEIEGSSIHSWKTRPAHQN 221

Query: 172 AIDYWRLPPDSTLRDVVVVIRADE 195
           +I+YW+L  ++TL DVV  IR DE
Sbjct: 222 SIEYWKLSENATLLDVVKAIRKDE 245


>gi|71016790|ref|XP_758921.1| hypothetical protein UM02774.1 [Ustilago maydis 521]
 gi|46098452|gb|EAK83685.1| hypothetical protein UM02774.1 [Ustilago maydis 521]
          Length = 448

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/149 (47%), Positives = 95/149 (63%), Gaps = 4/149 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-RPQWY 109
           + LE++  VPGMV     H +SLR      GWI  +LE+AENERMHL+  + L+ +P   
Sbjct: 235 IFLESIAGVPGMVAATCRHLQSLRLMRRDKGWIHTMLEDAENERMHLLVALHLSGKPGLI 294

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENA 166
            R  V   QGVF+N +F+ YL SP++AHR VG LEEEAV +Y+  L+DL+ G     E+ 
Sbjct: 295 ARTFVLLAQGVFYNFFFIFYLLSPRVAHRFVGVLEEEAVLTYSLILEDLKEGRLPEWEDV 354

Query: 167 PAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           PAP IA  YW+L  ++ L DV+  IRADE
Sbjct: 355 PAPEIAKQYWQLGDEAMLVDVIRAIRADE 383


>gi|256674265|gb|ACV04930.1| mitochondrial alternative oxidase [Blastocystis sp. Nand II]
          Length = 304

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 1/177 (0%)

Query: 19  PENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEH 78
           P+   D+ A   V AL    + +F+  ++  A+ LE+V ++PG+V   L H + LR+ + 
Sbjct: 76  PKGVSDRVASGIVNALFKIGNAYFRENYILRAVFLESVASIPGLVCSNLHHLRCLRRLQ- 134

Query: 79  SGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHR 138
              WIK L++EAENERMHL+      +    ++  +   Q  F   +   ++ +P+ +HR
Sbjct: 135 PDSWIKPLVDEAENERMHLLAVRTYTKLTAVQKLFIRITQFSFVTLFSFLFVFAPRTSHR 194

Query: 139 IVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +VG+LEE AV+SYTE ++ +++ + EN PA  I  DYW LP D+TLRD ++VIRADE
Sbjct: 195 LVGFLEEHAVDSYTEMIRRIDSNTLENRPATQITKDYWGLPEDATLRDALLVIRADE 251


>gi|149239580|ref|XP_001525666.1| alternative oxidase 1, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146451159|gb|EDK45415.1| alternative oxidase 1, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 390

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 122/221 (55%), Gaps = 31/221 (14%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKF---------------PTHLFFQR- 44
           P E Y  +++     H  P N+R+KF Y  ++  +F               P      R 
Sbjct: 122 PAELYGVEVT-----HKTPANFREKFCYGLIKTCRFWFDLVTGYAEPKTGDPNEYKGTRW 176

Query: 45  -----RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMT 99
                + M   + LE++  VPG V   L   +SLR  +   G+I+  LEEAE ERMHL+ 
Sbjct: 177 EMTESKWMTRIIFLESIAGVPGSVAAFLRQLQSLRLLKRDRGFIQTYLEEAEQERMHLLV 236

Query: 100 FIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            +++ +P  + RA+++  QGVF NA+FL Y+A+P  A  IVGY+EEEA ++YTE LKDL+
Sbjct: 237 ALKIGKPSLFTRAIMYVGQGVFANAFFLTYMANPNAAASIVGYIEEEACHTYTELLKDLD 296

Query: 160 NGS----FENAPAPAIAIDYW-RLPPDSTLRDVVVVIRADE 195
           N      FEN   P IA++YW  L   ST +D+++ IRADE
Sbjct: 297 NKGKFPIFENMTIPKIAVEYWPGLNHQSTFKDLILQIRADE 337


>gi|2662190|dbj|BAA23725.1| alternative oxidase [Chlamydomonas sp. W80]
          Length = 155

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 86/114 (75%), Gaps = 1/114 (0%)

Query: 83  IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGY 142
           ++ALLEEAENERMHL+TF+E+ +P W  RA V   QG +FN +F++YL SPK  H +VGY
Sbjct: 5   LQALLEEAENERMHLLTFLEMRQPSWMFRAAVLLAQGAYFNMFFISYLISPKFCHAVVGY 64

Query: 143 LEEEAVNSYTEFLKDLENGS-FENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           LEEEAV +YT  L D++ G  +++ PAP   I YW+L PD+T+RD+++ +RADE
Sbjct: 65  LEEEAVKTYTHLLHDIDAGHVWKDKPAPKTGIAYWKLSPDATMRDLILAVRADE 118


>gi|300120685|emb|CBK20239.2| Alternative oxydase (AOX) [Blastocystis hominis]
          Length = 302

 Score =  139 bits (350), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 106/172 (61%), Gaps = 1/172 (0%)

Query: 24  DKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWI 83
           D+ A   V  L F  +L+F+  ++  A+ LE+V +VPG+V   L H + LR+ +    WI
Sbjct: 81  DRIAKGIVDMLFFCGNLYFRDNYIRRAIFLESVASVPGLVCSSLHHLRCLRRLQ-PNEWI 139

Query: 84  KALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYL 143
           K L++EAENERMHL+           ++  +  +Q  F + +   ++ +P+ +HR+VG+L
Sbjct: 140 KPLVDEAENERMHLLAVRTYTNLTIVQKLFIRILQVSFVSLFSFMFVFTPRTSHRLVGFL 199

Query: 144 EEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           EE AV+SYTE +K ++ G  +N  A  I  DYW LP D+TLRD ++VIRADE
Sbjct: 200 EEHAVDSYTEMIKRIDTGKLKNERATQITKDYWGLPEDATLRDALLVIRADE 251


>gi|343429594|emb|CBQ73167.1| related to alternative oxidase precursor, mitochondrial
           [Sporisorium reilianum SRZ2]
          Length = 409

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 97/148 (65%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LET+  VPGMV     H +SLR  +   GWI  +LE+AENERMHL+TF+ +A+P W  
Sbjct: 197 IFLETIAGVPGMVAASCRHLQSLRLMKRDKGWIHTMLEDAENERMHLLTFMAVAKPGWIA 256

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
           R      QGVF+N +F+ YL +PK+AHR VG LEEEAV +Y+  L+DL+ G     EN P
Sbjct: 257 RTFALLAQGVFYNFFFVFYLTAPKVAHRFVGVLEEEAVLTYSYILEDLKEGRLPEWENVP 316

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
           AP IA  YW+L   + L DV+  +RADE
Sbjct: 317 APEIAKQYWQLGDQAMLVDVIRAVRADE 344


>gi|224012252|ref|XP_002294779.1| mitochondrial alternative oxidase [Thalassiosira pseudonana
           CCMP1335]
 gi|220969799|gb|EED88139.1| mitochondrial alternative oxidase [Thalassiosira pseudonana
           CCMP1335]
          Length = 227

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 111/203 (54%), Gaps = 16/203 (7%)

Query: 8   DLSINVTKHHKPENYRDKFAYWTVQALKFPTHL--------FFQRRHMCHAMLLETVGAV 59
           +L + +T H  PE + DK A+  V+A +F   +            + +  A+ LETV A+
Sbjct: 13  ELDVKLT-HVPPEKFVDKAAFVAVKAFRFGFDIGTGWNRGAITTDKILNRAIFLETVAAI 71

Query: 60  PGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQG 119
           PGMV  ++ H +SLR     GG +   LEEA NERMHL+TFI +  P +  RA V   Q 
Sbjct: 72  PGMVAAIIRHFRSLRNMARDGGMLNMFLEEANNERMHLLTFIRMKDPGYLFRATVIGGQF 131

Query: 120 VFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN-------GSFENAPAPAIA 172
            F +A+   Y+ SP   HR VGY+EEEA  +YT+ +K +E        G++    AP IA
Sbjct: 132 AFGSAFLTMYMISPAFCHRFVGYIEEEACATYTKIIKAIEEAPEGTDLGNWRTEEAPKIA 191

Query: 173 IDYWRLPPDSTLRDVVVVIRADE 195
             YW L    ++ D+++ +RADE
Sbjct: 192 KGYWHLGEHGSVLDLMLAVRADE 214


>gi|290972516|ref|XP_002668998.1| alternative oxidase [Naegleria gruberi]
 gi|284082538|gb|EFC36254.1| alternative oxidase [Naegleria gruberi]
          Length = 362

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 107/194 (55%), Gaps = 19/194 (9%)

Query: 15  KHHKPENYRDKFAYW-----TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLH 69
           K  +P N  D++A W       + LKF     F R  + +++ LET+ A PGMVGGM  H
Sbjct: 150 KRMEPRNRTDRWAQWWARRCVARILKF----LFGRNMLRYSVFLETMSATPGMVGGMWRH 205

Query: 70  CKSLR-------KFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFF 122
             SLR       K EH    + ALLEEAEN RMH++  +E+      ER L+   Q  F 
Sbjct: 206 FASLRSKPIDRCKKEHLR--VGALLEEAENHRMHMLVLLEMTHQNILERILMVVAQLSFS 263

Query: 123 NAYFLAY-LASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPD 181
             YF  Y LA    +HR VGYL E AV SY   LK ++     N PAP +AI+YW LP +
Sbjct: 264 QYYFYIYSLAGKTFSHRFVGYLAETAVESYGLVLKQIDEKKIANPPAPEMAINYWNLPKN 323

Query: 182 STLRDVVVVIRADE 195
           +TLRDV++ IR DE
Sbjct: 324 ATLRDVILAIRMDE 337


>gi|385304059|gb|EIF48094.1| alternative oxidase mitochondrial precursor [Dekkera bruxellensis
           AWRI1499]
          Length = 374

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 94/148 (63%), Gaps = 3/148 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           ++LE++  +PG V G L H +S+R       +I+ LL+EA NERMHL+TF++L +P  + 
Sbjct: 173 IVLESIAGIPGSVAGFLRHLQSIRLMRRDKAFIETLLDEAYNERMHLLTFMKLGKPGRFA 232

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAP 167
           R +++  QG+F N +FL Y+  PK+ HR VGYLEEEAV +YT  L+D+  G      +  
Sbjct: 233 RLMLWFGQGIFANLFFLTYIIRPKICHRFVGYLEEEAVLTYTRCLQDMRMGLNPQLYHTG 292

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRADE 195
            P IA DYW L    T  D+++ IRADE
Sbjct: 293 IPQIAKDYWHLTNKDTFYDMILYIRADE 320


>gi|403357544|gb|EJY78400.1| Alternative oxidase isoform A [Oxytricha trifallax]
          Length = 275

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 11/191 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFF----QRRH----MCHAMLLETVGAVPGMVGGML 67
           H +P N+RDKFA   +  L+           Q+R         +LLE++  +PG+V G  
Sbjct: 41  HREPHNFRDKFALRWIGGLRLFVDALTGKDAQKRDAKTWFNRMVLLESIAPIPGLVVGTA 100

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            + K+L+  +     +  +LEE+ENER HL  ++   +P++  R  +   Q  F+N +FL
Sbjct: 101 KYFKNLKDMKTDRALVHFMLEESENERTHLYLWLNYQKPKFISRMGIAFKQIAFWNVFFL 160

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAPAPAIAIDYWRLPPDSTL 184
            Y+ SP + HR +GYLEEEA+ +YT FLK ++NG+    +N PAP +A DY+ LP D+  
Sbjct: 161 TYIFSPYVCHRFMGYLEEEAIYNYTMFLKQIDNGNLKELQNEPAPKLAKDYYNLPEDAKF 220

Query: 185 RDVVVVIRADE 195
           RD+++ +RADE
Sbjct: 221 RDMLLALRADE 231


>gi|388516585|gb|AFK46354.1| unknown [Medicago truncatula]
          Length = 131

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 82/101 (81%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           MHLMT +EL +P W+ER LV   QGVFFN +F+ Y+ SPK+AHR VGYLEEEAV SYT++
Sbjct: 1   MHLMTMVELVKPSWHERLLVITAQGVFFNGFFVFYILSPKIAHRFVGYLEEEAVISYTQY 60

Query: 155 LKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           L  +E+G  EN PAPAIAIDYWRLP D+TL+DVV VIRADE
Sbjct: 61  LNAIESGKVENVPAPAIAIDYWRLPNDATLKDVVTVIRADE 101


>gi|224012000|ref|XP_002294653.1| mitochondrial alternative oxidase [Thalassiosira pseudonana
           CCMP1335]
 gi|220969673|gb|EED88013.1| mitochondrial alternative oxidase [Thalassiosira pseudonana
           CCMP1335]
          Length = 264

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 109/205 (53%), Gaps = 16/205 (7%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFP--------THLFFQRRHMCHAMLLETVG 57
           K +L I +T H +PE+  D+ A + V+  +F                + +  A+ LETV 
Sbjct: 11  KEELDIKMT-HVEPESALDRLALFAVKVTRFGFDQATGWNRGSITTDKVLNRAIFLETVA 69

Query: 58  AVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
           A+PGMV  ++ H +SLR     GG +   LEEA NERMHL+TFI +  P +  R  V   
Sbjct: 70  AIPGMVAAIIRHFRSLRNMARDGGMLNMFLEEANNERMHLLTFIRMKDPGYLFRGAVVGS 129

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN-------GSFENAPAPA 170
           Q  F +A+ + Y+ SP   HR VGY+EEEA  +YT+ +K +E          +    AP 
Sbjct: 130 QFAFGSAFLVLYMISPAFCHRFVGYIEEEACATYTKIIKAIEEAPEGSDLAKWRTEEAPK 189

Query: 171 IAIDYWRLPPDSTLRDVVVVIRADE 195
           IA  YW L  + T+ DV+  +RADE
Sbjct: 190 IAKGYWHLGEEGTVLDVMRAVRADE 214


>gi|145548257|ref|XP_001459809.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427636|emb|CAK92412.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score =  135 bits (340), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 113/209 (54%), Gaps = 19/209 (9%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALK--------------FPTHLFFQRRHMCHAM 51
           K +L     +H     + D FAY+ +Q+++              F + L  +++ +   +
Sbjct: 32  KPELEKVSLEHKTAITFGDHFAYYFIQSMRLGFDVMSGYKKTLPFQSELVSEKKWINRVL 91

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYER 111
            LETV  VPG V GM  H +SLR  +   GWI  LLEEAENER+HL+TF+ + +P    R
Sbjct: 92  FLETVAGVPGFVAGMHRHLRSLRGMKRDQGWIHTLLEEAENERIHLLTFLNIKKPSLIFR 151

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN-----GSFENA 166
             V   Q  +   + +AY+  P++ HRIVGYLEEEAV +YT  + ++E       S+   
Sbjct: 152 TGVVLAQAWYVALFGVAYIFWPRVCHRIVGYLEEEAVKTYTHMIHEIEREGSPIHSWTTR 211

Query: 167 PAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
            A   +I+YW L  ++TL DVV  IR DE
Sbjct: 212 KANQNSIEYWGLDENATLLDVVKAIRKDE 240


>gi|428172811|gb|EKX41717.1| hypothetical protein GUITHDRAFT_153725, partial [Guillardia theta
           CCMP2712]
          Length = 232

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 84/145 (57%), Gaps = 8/145 (5%)

Query: 16  HHKPENYRDKFAYWTVQALK--------FPTHLFFQRRHMCHAMLLETVGAVPGMVGGML 67
           H  P +  D  A   VQA +        +      + + +  A+ LETV  VPGMVGGML
Sbjct: 88  HVDPHDRADSLALSAVQAARWTFDTLSGYKIGNITESKVINRAIFLETVAGVPGMVGGML 147

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFL 127
            H +SLR      GWI  LLEEAENERMHL+TF+ + +P    R  V   QG+F N +FL
Sbjct: 148 RHLRSLRTMNRDHGWIHTLLEEAENERMHLLTFVTIKKPGPIFRLAVIGTQGIFMNLFFL 207

Query: 128 AYLASPKLAHRIVGYLEEEAVNSYT 152
            Y+  PK+ HR VGYLEEEAV +YT
Sbjct: 208 TYMVYPKICHRFVGYLEEEAVKTYT 232


>gi|163796586|ref|ZP_02190545.1| Alternative oxidase [alpha proteobacterium BAL199]
 gi|159178146|gb|EDP62691.1| Alternative oxidase [alpha proteobacterium BAL199]
          Length = 146

 Score =  130 bits (327), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 74/101 (73%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           MHLMTF+++A+P   ER ++   Q VF+N YF  YL +PK AHR+V Y EEEAVNSYT +
Sbjct: 1   MHLMTFVQVAQPTILERGIIMLTQAVFYNFYFFLYLFAPKTAHRMVAYFEEEAVNSYTNY 60

Query: 155 LKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           L D++ G   N PAP IAI YW L PD+TLRDVV+ +RADE
Sbjct: 61  LADIDAGRHPNPPAPEIAIKYWDLAPDATLRDVVLAVRADE 101


>gi|295646739|gb|ADG23120.1| alternative oxidase [Rhizoplaca chrysoleuca]
          Length = 180

 Score =  129 bits (324), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 81/119 (68%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +R+ +   + LE+V  VPGMV   + H  SLR+ +   GWI+ LLEEA NERMHL+TF++
Sbjct: 52  ERKWLIRFLFLESVAGVPGMVAASIRHLHSLRRLKRDNGWIETLLEEAYNERMHLLTFMK 111

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG 161
           +A P  + + ++   QGVF+N +F AYL SP+  HR VGYLEEEAV +YT  L DL+ G
Sbjct: 112 IAEPGRFMKLMILGAQGVFYNGFFFAYLLSPRTCHRFVGYLEEEAVLTYTRVLADLDAG 170


>gi|14599478|gb|AAK70937.1| alternative oxidase 1c [Mangifera indica]
          Length = 78

 Score =  128 bits (322), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 65/76 (85%)

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFN 123
           GGMLLH KSLRKFEH GGWIKALLEEAENER HLM F+E+A+P+WYERAL+  VQGVF N
Sbjct: 3   GGMLLHFKSLRKFEHRGGWIKALLEEAENERTHLMIFVEVAKPRWYERALILRVQGVFLN 62

Query: 124 AYFLAYLASPKLAHRI 139
           AY L YL SPK AHRI
Sbjct: 63  AYSLGYLISPKFAHRI 78


>gi|238684055|gb|ACR54256.1| alternative oxidase [Anadara ovalis]
          Length = 109

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 79/109 (72%), Gaps = 3/109 (2%)

Query: 86  LLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEE 145
           LLEEAENERMHLMT ++L +P W  R  V   QGVF  ++ L+YL SP+  HR VGYLEE
Sbjct: 1   LLEEAENERMHLMTALQLKQPSWLLRQCVVLAQGVFVTSFSLSYLVSPRFCHRFVGYLEE 60

Query: 146 EAVNSYTEFLKDLENGSFE---NAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           EAV +YT+ L+D+E G+ E     PAP +A+ YW+L P +T++DV+++I
Sbjct: 61  EAVKTYTKCLEDIEEGTMEIWKTKPAPDVAVRYWKLDPAATMKDVILMI 109


>gi|126668999|ref|ZP_01739937.1| putative oxidase [Marinobacter sp. ELB17]
 gi|126626548|gb|EAZ97207.1| putative oxidase [Marinobacter sp. ELB17]
          Length = 142

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 86/126 (68%), Gaps = 2/126 (1%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           ++KHH P  + D+ A+   + L+F   LFF +R+   A++LETV AVPGMVGGM+ H +S
Sbjct: 17  LSKHHTPSGFSDRVAFRLTRLLRFFADLFFAKRYGHRAVVLETVAAVPGMVGGMVGHMRS 76

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLA--YL 130
           LR+ E +  WI  LLEEAENERMHLMTF+++A+P   ER L+   QG F  A++ +  +L
Sbjct: 77  LRRMEDNREWIHTLLEEAENERMHLMTFVQIAQPSVLERVLILLAQGFFLPAFYFSTLFL 136

Query: 131 ASPKLA 136
           A+P + 
Sbjct: 137 AAPHIG 142


>gi|340502184|gb|EGR28896.1| hypothetical protein IMG5_166890 [Ichthyophthirius multifiliis]
          Length = 266

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 109/201 (54%), Gaps = 21/201 (10%)

Query: 16  HHKPENYRDKFAYWTVQALK------------FP----THLFFQRRHMCHAMLLETVGAV 59
           H +P    D FA   +Q+L+            FP    T    +++ +   + LETV  V
Sbjct: 41  HLQPSTIGDSFANIFIQSLRLSFDIMSGYKQIFPWQDKTKPISEKKWLNRMLFLETVAGV 100

Query: 60  PGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQG 119
           PG V  M  H  SLR  +   GWI  LLEEAENERMHL+TF+++ +P    R  V   Q 
Sbjct: 101 PGFVAAMHRHLTSLRNMQRDYGWIHTLLEEAENERMHLLTFMKVQKPSPLFRMGVVFAQF 160

Query: 120 VFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDL-ENGS----FENAPAPAIAID 174
            +   + + Y+  PK+ HR+VGYLEEEAV +YT  ++ + + GS    ++   AP I+ +
Sbjct: 161 GYVGLFSILYMFFPKVCHRVVGYLEEEAVKTYTHCIEVINQEGSPISHWKTMVAPQISRN 220

Query: 175 YWRLPPDSTLRDVVVVIRADE 195
           YW L  +++L DV+  IR DE
Sbjct: 221 YWYLSDNASLLDVIYAIRKDE 241


>gi|33328283|gb|AAQ09592.1| alternative oxidase [Cryptosporidium parvum]
          Length = 144

 Score =  122 bits (306), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 5/138 (3%)

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-RPQWYERALVFAVQGV 120
           MVG ML H  SLRK +   GWI  LLEEAENERMHL+  ++L  +P    R  V   Q  
Sbjct: 1   MVGAMLRHFSSLRKMKRDNGWIHTLLEEAENERMHLLISLQLINKPSILTRVSVIGTQFA 60

Query: 121 FFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG---SFENAPAPAIAIDYWR 177
           F   Y + Y+ SPK +HR VGYLEEEAV++YT  +++++ G    FE   AP  A  Y+ 
Sbjct: 61  FLIFYTVFYIISPKYSHRFVGYLEEEAVSTYTHLIEEIDKGLLPGFERK-APKFASVYYG 119

Query: 178 LPPDSTLRDVVVVIRADE 195
           LP D+T+RD+ + +R DE
Sbjct: 120 LPEDATIRDLFLAMRRDE 137


>gi|260794312|ref|XP_002592153.1| hypothetical protein BRAFLDRAFT_124076 [Branchiostoma floridae]
 gi|229277368|gb|EEN48164.1| hypothetical protein BRAFLDRAFT_124076 [Branchiostoma floridae]
          Length = 403

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 104/229 (45%), Gaps = 46/229 (20%)

Query: 13  VTKHHKPENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETVGAVPGMVG 64
           V  H  P+++ DK AY +V+ +++   LF         +R+ +   + LETV  VPGMV 
Sbjct: 150 VITHTPPQSFTDKLAYGSVKFMRWNFDLFSGFKYGKRTERKWLQRIIFLETVAGVPGMVA 209

Query: 65  GMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNA 124
            M  H  SLR+ +   GWI  LLEEAENERMHLMT ++L  P    R  V   QG F   
Sbjct: 210 AMTRHLHSLRRLKRDYGWIHTLLEEAENERMHLMTALQLRNPSALFRWCVVFAQGTFVTL 269

Query: 125 YFLAYLASPKLAHRIVGYLEEEAVNSYT-------------------------------- 152
           +  AYL SP+  HR  G      V +                                  
Sbjct: 270 FSAAYLVSPRFCHRFAGPGSIPGVGTCARQFTTQRHHHYAKRTGPFGMVRCLNPTVTHLL 329

Query: 153 ---EFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
                + D ++G      +  AP +A  YW LP D+ +RDV++ IRADE
Sbjct: 330 GIFRGMGDFDSGRLPLWSDMEAPPLAKRYWSLPHDAMMRDVILAIRADE 378


>gi|238684059|gb|ACR54258.1| alternative oxidase, partial [Mercenaria mercenaria]
          Length = 109

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 3/109 (2%)

Query: 86  LLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEE 145
           LLEEAENERMHLMT ++L +P    +  V   QGVF   + + YL SP+  HR VGYLEE
Sbjct: 1   LLEEAENERMHLMTALQLKQPSRLFKWCVIGTQGVFVGMFSVWYLISPRFCHRFVGYLEE 60

Query: 146 EAVNSYTEFLKDLENGSFE---NAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           EAV +YT+ L+D+E+G+ E     P+P +AI YW LP D+T++DV++ I
Sbjct: 61  EAVKTYTKCLEDIESGALEHWKTQPSPEVAITYWNLPEDATMKDVILAI 109


>gi|238684053|gb|ACR54255.1| alternative oxidase [Crassostrea virginica]
          Length = 109

 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 3/109 (2%)

Query: 86  LLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEE 145
           LLEEAENERMHLMT ++L +P W  R  V   QG F   +  AYL SP+  HR VGYLEE
Sbjct: 1   LLEEAENERMHLMTALQLRQPSWLFRMGVIVSQGTFVTMFSGAYLLSPRFCHRFVGYLEE 60

Query: 146 EAVNSYTEFLKDLENGSF---ENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           EAV +Y++ LKD+E+G     +   AP +A  YW+LP  ++++DVV+ I
Sbjct: 61  EAVFTYSKCLKDIESGPLKHWQTQKAPDVATRYWKLPETASMKDVVLAI 109


>gi|238684057|gb|ACR54257.1| alternative oxidase, partial [Ephydatia muelleri]
          Length = 109

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 3/109 (2%)

Query: 86  LLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEE 145
           LLE+AENERMHL+T + L +P  + R +V A QGVF    + +Y  SP+  HR VGYLEE
Sbjct: 1   LLEDAENERMHLLTALALKKPGPFFRLIVMAGQGVFVTLXWASYQVSPRFCHRFVGYLEE 60

Query: 146 EAVNSYTEFLKDLENGSFEN---APAPAIAIDYWRLPPDSTLRDVVVVI 191
           +AV +YTE L  ++NG  +     PAP IA+ YW+L  D+ +RDV++ I
Sbjct: 61  QAVGTYTECLHSIDNGDLKTWALLPAPPIAVQYWKLKKDAMMRDVILAI 109


>gi|340502185|gb|EGR28897.1| hypothetical protein IMG5_166900 [Ichthyophthirius multifiliis]
          Length = 398

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 5/137 (3%)

Query: 43  QRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           +++ +   + LETV  VPG V  M  +  SLR  +   GWI  LLEEAENERMHL+TF++
Sbjct: 19  EKKWLNRMLFLETVAGVPGFVAAMHRNLTSLRNMQRDYGWIHTLLEEAENERMHLLTFMK 78

Query: 103 LARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYT---EFLKDLE 159
           + +P    R  V   Q  +   + + Y+  PK+ HR+VGYLEEEAV +YT   E L  + 
Sbjct: 79  VQKPSPLFRMGVVFAQFGYVGLFSILYMFFPKVCHRVVGYLEEEAVKTYTHCIEVLSPIS 138

Query: 160 NGSFENAPAPAIAIDYW 176
           N  ++   A  I+  YW
Sbjct: 139 N--WKTIMATQISRKYW 153


>gi|218196955|gb|EEC79382.1| hypothetical protein OsI_20294 [Oryza sativa Indica Group]
          Length = 128

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/56 (76%), Positives = 50/56 (89%)

Query: 95  MHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           MHLMTF+E+A+P+WYER LV AVQ VFFNAYFL YL SPKLAHR+VGYLEEEA ++
Sbjct: 1   MHLMTFMEVAKPRWYERTLVLAVQRVFFNAYFLGYLLSPKLAHRVVGYLEEEAPST 56


>gi|18642678|gb|AAL76179.1|AC074105_13 Putative alternative oxidase [Oryza sativa]
          Length = 243

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 24/113 (21%)

Query: 83  IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGY 142
           +  + EEAENE+MHLMTF+E+A+ +  +  + F     F ++                  
Sbjct: 125 VGGVDEEAENEQMHLMTFMEVAKLRCIDVTIFFVATNDFSSS------------------ 166

Query: 143 LEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
                 +SYTE+LKD+E G  EN P P IAIDYWRLP D+TL+DVVVV+ ADE
Sbjct: 167 ------DSYTEYLKDIEAGKIENVPTPPIAIDYWRLPADATLKDVVVVVCADE 213


>gi|238487558|ref|XP_002375017.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220699896|gb|EED56235.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 142

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 4/89 (4%)

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSF---ENAP 167
           R +V   QGVFFN +FL+YL SP++ HR VGYLEEEAV +YT  ++D+E+G         
Sbjct: 2   RLMVLGAQGVFFNGFFLSYLMSPRICHRFVGYLEEEAVLTYTRAIQDIEHGKLPKWTKLE 61

Query: 168 APAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           AP IA+ YW++P    T++D+++ +RADE
Sbjct: 62  APEIAVQYWKMPEGQRTMKDLLMYVRADE 90


>gi|342184601|emb|CCC94083.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 364

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK--- 71
            HHKP  + D F  ++V+ L++     F+ R++  A +L+T+   P + G  + + K   
Sbjct: 98  SHHKPGCWSDCFCVYSVKFLRWCVDKLFRERYIHRATMLKTIAPAPSLAGAFVANLKMFL 157

Query: 72  --SLRKFEHSGGW---IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
             ++     SGG+   ++ L+ ++E+   H+   + +      ERA    + G+ F  + 
Sbjct: 158 WKNVTYVPSSGGFAAEVRVLMAQSESHASHINILLSMCEITLVERAAAVLLFGMHFFIFT 217

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
           L +L  P++A R++GYL EE+V  +T  + D+E G     P PA AI YW L
Sbjct: 218 LLFLIQPRMAFRLLGYLNEESVVIWTHMINDIELGKVVERPVPAAAIQYWGL 269


>gi|323456007|gb|EGB11874.1| hypothetical protein AURANDRAFT_70672 [Aureococcus anophagefferens]
          Length = 3210

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 51   MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
            ++LE+   VPG V     H  SLR+ +   G I   LEEAENERMHL+  +++       
Sbjct: 3017 IILESFAGVPGFVAAGFRHFYSLRELKRDHGAIFTFLEEAENERMHLLVCMKMFEASPAT 3076

Query: 111  RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN------GSFE 164
            RALV A Q          Y ASP+  HR VGYLEE AV +Y   ++          G++ 
Sbjct: 3077 RALVVAAQFTMTPLLCATYAASPRAMHRFVGYLEETAVMTYANLVEKAATPGTRLHGAWA 3136

Query: 165  NAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
               AP IA  YW+L  D++  + +  + ADE
Sbjct: 3137 GLDAPDIAKSYWKLDDDASWAECLRHMLADE 3167


>gi|380474941|emb|CCF45511.1| alternative oxidase, partial [Colletotrichum higginsianum]
          Length = 241

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 57/78 (73%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           + LE++  VPGMV GML H  SLR+ +   GWI++LLEE+ NERMHL+TF++++ P W+ 
Sbjct: 164 IFLESIAGVPGMVAGMLRHLGSLRRMKRDNGWIESLLEESFNERMHLLTFMKMSEPGWFM 223

Query: 111 RALVFAVQGVFFNAYFLA 128
           + ++   QGVF++  +++
Sbjct: 224 KLMILGAQGVFYSGRWVS 241


>gi|407415182|gb|EKF36790.1| GTPase activating protein of Rab-like GTPase, putative [Trypanosoma
           cruzi marinkellei]
          Length = 372

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 9/172 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P+ + D    + V+ L++     F+ R++  A +L+ +   P + G M+ H +++ K
Sbjct: 114 HSPPQRFTDHCCIYLVKLLRWCADKLFRERYLHRATMLKVIAPAPPLAGAMISHLRTILK 173

Query: 76  FEH------SGGW---IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
            E+       G +    + LL +AE+   H+   + +    + ER     +Q + F  + 
Sbjct: 174 KENPAYIPGKGDFATETRGLLAQAESHASHIRILMLMTEITYVERVAALFLQAIHFAIFA 233

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
           L +L SP++A R++GYL EE+V  +T  + D++ G       P  AI+YW L
Sbjct: 234 LLFLLSPRVAFRLMGYLGEESVVIWTHMINDIDLGKVTERALPQDAIEYWGL 285


>gi|254450111|ref|ZP_05063548.1| alternative oxidase [Octadecabacter arcticus 238]
 gi|198264517|gb|EDY88787.1| alternative oxidase [Octadecabacter arcticus 238]
          Length = 86

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 51/66 (77%)

Query: 130 LASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVV 189
           + +P++AHR+VGYLEEEAV SYT++ + ++ G+ +N P P IA  YW LP D+ LRDVV+
Sbjct: 1   MLAPRVAHRVVGYLEEEAVISYTQYHEKIDAGTVKNVPTPEIAKKYWNLPDDARLRDVVI 60

Query: 190 VIRADE 195
           VIR DE
Sbjct: 61  VIREDE 66


>gi|41058334|gb|AAR99159.1| mitochondrial alternative oxidase [Petunia x hybrida]
          Length = 42

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/42 (92%), Positives = 41/42 (97%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRI 139
           MTFIEL+ P+WYERALVFAVQGVFFNAYFLAYLASPKLAHRI
Sbjct: 1   MTFIELSNPKWYERALVFAVQGVFFNAYFLAYLASPKLAHRI 42


>gi|117662855|gb|ABK55726.1| mitochondrial alternative oxidase [Cucumis sativus]
          Length = 55

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 45/55 (81%)

Query: 80  GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           GG ++ LLEEAENERMHLMT IEL +P+W+ER LV  VQGVFFNA+F+ YL  P+
Sbjct: 1   GGGLRPLLEEAENERMHLMTMIELVQPKWHERLLVITVQGVFFNAFFVLYLTVPQ 55


>gi|388509390|gb|AFK42761.1| unknown [Lotus japonicus]
          Length = 176

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 50/64 (78%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVP 60
           PW++Y+AD+SI+VTKHH P+   DK A+  V+ L+  + L+F+ R+ CHAM+LET+ AVP
Sbjct: 90  PWDSYRADVSIDVTKHHLPKTVTDKVAFRAVKFLRVLSDLYFKERYGCHAMMLETIAAVP 149

Query: 61  GMVG 64
           GMVG
Sbjct: 150 GMVG 153


>gi|340057356|emb|CCC51701.1| putative alternative oxidase [Trypanosoma vivax Y486]
          Length = 213

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 9/96 (9%)

Query: 17  HKP-ENYRDKFAYWTVQALKFPTHLF--------FQRRHMCHAMLLETVGAVPGMVGGML 67
           HKP E   D  AY  V+  ++    F         +++ +   + LETV  VPGMVGGML
Sbjct: 78  HKPAEGIVDTLAYRLVRTCRWAFDTFSLYRFGSLTEQKVINRCLFLETVAGVPGMVGGML 137

Query: 68  LHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIEL 103
            H  SLR+     GWI  LL EAENERMHLMTFIEL
Sbjct: 138 RHLTSLRQMRRDKGWINTLLVEAENERMHLMTFIEL 173


>gi|71665747|ref|XP_819840.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885159|gb|EAN97989.1| hypothetical protein, conserved [Trypanosoma cruzi]
 gi|219564532|dbj|BAH03832.1| alternative oxidase [Trypanosoma cruzi]
          Length = 366

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 9/172 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P+ + D    + V+ L++     F+ R++  A +L+ +   P + G M+ H + + K
Sbjct: 111 HSPPQRFSDHCCIYLVKLLRWCADKLFRERYLHRATMLKVIAPAPPLAGAMISHLRMILK 170

Query: 76  FEH------SGGW---IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
            E+       G +    + LL +AE+   H+   + L    + ER     +Q + F  + 
Sbjct: 171 KENPAYIPGKGDFATETRGLLAQAESHASHIRILMLLTEITYVERVAAVFLQAIHFAIFA 230

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
             +L SP++A R++GYL EE+V  +T  + D++ G       P  AI+YW L
Sbjct: 231 FLFLLSPRVAFRLMGYLGEESVVIWTHMINDIDFGKVTERALPQDAIEYWGL 282


>gi|338227624|gb|AEI91024.1| alternative oxidase [Beauveria bassiana]
          Length = 58

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 44/58 (75%)

Query: 89  EAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEE 146
           EA NERMHL+TF+++  P W+ + ++   QGVFFN  FL YLA+PK+ HR VGYLEEE
Sbjct: 1   EAYNERMHLLTFMKMCEPGWFMKLMIIGAQGVFFNGMFLMYLANPKIVHRFVGYLEEE 58


>gi|126668998|ref|ZP_01739936.1| alternative oxidase [Marinobacter sp. ELB17]
 gi|126626547|gb|EAZ97206.1| alternative oxidase [Marinobacter sp. ELB17]
          Length = 72

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 45/56 (80%)

Query: 140 VGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +GY EE AV SY E+L ++++G  EN PAP IAIDYW+LP D+TLRDV++V+R DE
Sbjct: 1   MGYFEEAAVYSYGEYLAEVDSGRLENVPAPQIAIDYWKLPADATLRDVIIVVRMDE 56


>gi|407849450|gb|EKG04187.1| GTPase activating protein of Rab-like GTPase, putative [Trypanosoma
           cruzi]
          Length = 366

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 9/172 (5%)

Query: 16  HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRK 75
           H  P+ + D    + V+ L++     F+ R++  A +L+ +   P + G M+ H + + K
Sbjct: 111 HSPPQRFSDHCCIYLVKLLRWCADKLFRERYLHRATMLKVIAPAPPLAGAMISHLRMILK 170

Query: 76  FEH------SGGW---IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYF 126
            E+       G +    + LL +AE+   H+   + +    + ER     +Q   F  + 
Sbjct: 171 KENPAYIPGKGDFATETRGLLAQAESHASHIRILMLMTEITYVERIAAVFLQATHFAIFA 230

Query: 127 LAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
             +L SP++A R++GYL EE+V  +T  + D++ G       P  AI+YW L
Sbjct: 231 FLFLLSPRVAFRLMGYLGEESVVIWTHMINDIDLGKVTERALPQDAIEYWGL 282


>gi|71564278|gb|AAZ38329.1| alternative oxidase [Metarhizium anisopliae]
          Length = 59

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 44/59 (74%)

Query: 89  EAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEA 147
           EA NERMHL+TF+++  P W+ + ++   QGVFFNA F+ YL  P++ HR VGYLEEEA
Sbjct: 1   EAYNERMHLLTFMKMCEPGWFMKLMIIGAQGVFFNALFITYLLHPRIVHRFVGYLEEEA 59


>gi|293338880|gb|ADE43747.1| alternative oxidase [Glugea plecoglossi]
          Length = 77

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 1/77 (1%)

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           ++GG+  H  SLR  + +   IK LL EAENER HL+TF+E+ +P  +++  +  +Q VF
Sbjct: 1   LIGGLFNHLYSLRNLKQNHN-IKKLLMEAENERQHLLTFLEVMKPNLFDQIAIKMIQVVF 59

Query: 122 FNAYFLAYLASPKLAHR 138
           FN+YF+ YL +PK+AHR
Sbjct: 60  FNSYFIFYLLAPKVAHR 76


>gi|218198261|gb|EEC80688.1| hypothetical protein OsI_23112 [Oryza sativa Indica Group]
          Length = 91

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 40/47 (85%)

Query: 149 NSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +SYTE+LKD+E G  EN P P IAIDYWRLP D+TL+DVVVV+RADE
Sbjct: 15  DSYTEYLKDIEAGKIENVPTPPIAIDYWRLPADATLKDVVVVVRADE 61


>gi|384247842|gb|EIE21327.1| hypothetical protein COCSUDRAFT_48069 [Coccomyxa subellipsoidea
           C-169]
          Length = 680

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 51  MLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYE 110
           +LLE +  VPG V  ++ H ++L      G ++++   E+ N   HL+T ++L RP    
Sbjct: 365 LLLECLSPVPGTVASIVAHVRALATLRGPGSFVESYQRESGNAHAHLLTLLQL-RPSLSL 423

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS---FENAP 167
           RALV   Q  F   Y  AY  +P+  H  V +L      + +  L+DL++GS   ++  P
Sbjct: 424 RALVLLSQAAFALPYAAAYAVAPRACHAFVCHLSGLTGEAISGALRDLDSGSIPSWQRLP 483

Query: 168 APAIAIDYWRLPPDSTLRDVVVVIRAD 194
           AP  A  YW LP  +T+R V++V+RAD
Sbjct: 484 APESAAAYWGLPEGATMRTVLLVVRAD 510


>gi|222616184|gb|EEE52316.1| hypothetical protein OsJ_34333 [Oryza sativa Japonica Group]
          Length = 72

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 3/64 (4%)

Query: 51  MLLETVGAVPGMVGG---MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ 107
           M+LETV AVP    G   MLLH  SLR  +HS GWI+ LLEEAENERMHLM F+ + + +
Sbjct: 1   MMLETVAAVPATGDGGRHMLLHLCSLRDIKHSDGWIRVLLEEAENERMHLMAFMAVPKRR 60

Query: 108 WYER 111
           WYER
Sbjct: 61  WYER 64


>gi|348681992|gb|EGZ21808.1| hypothetical protein PHYSODRAFT_354419 [Phytophthora sojae]
          Length = 212

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 10/100 (10%)

Query: 16  HHKPENYRDKFAYWTVQALKF----------PTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
           HH      ++ AY  V+AL+           P     ++  +   + LE+V  VPGMVGG
Sbjct: 113 HHPIVKMHERVAYMAVKALRTGFDVISGYRGPGGAMTEKDWLNRCLFLESVAGVPGMVGG 172

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELAR 105
           ML H +SLR+ +   GWI  LLEEAENERMHL+ F+ L +
Sbjct: 173 MLRHLRSLRRMKRDYGWIHTLLEEAENERMHLLIFMNLKQ 212


>gi|41058326|gb|AAR99155.1| mitochondrial alternative oxidase [Petunia x hybrida]
          Length = 42

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/42 (83%), Positives = 39/42 (92%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRI 139
           MTF+E+A+P+WYERALV AVQGVFFNAYF AYL SPKLAHRI
Sbjct: 1   MTFMEVAKPKWYERALVIAVQGVFFNAYFAAYLISPKLAHRI 42


>gi|41058330|gb|AAR99157.1| mitochondrial alternative oxidase [Petunia x hybrida]
          Length = 42

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRI 139
           MTF+E+A+P+WYERALVF VQGVFFNAYF  YL SPKLAHRI
Sbjct: 1   MTFMEVAKPKWYERALVFTVQGVFFNAYFATYLVSPKLAHRI 42


>gi|340057567|emb|CCC51913.1| conserved hypothetical protein, fragment, partial [Trypanosoma
           vivax Y486]
          Length = 324

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 9/173 (5%)

Query: 15  KHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS-L 73
            H KP  + D    + V+ L++     F+ R++  A +L+ +   P + G  + + K  L
Sbjct: 117 SHCKPNCFNDYCCIYMVKLLRWCADKLFRERYIHRATMLKVIAPAPSLAGAFVANLKLFL 176

Query: 74  RKFEHS---GG-----WIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           +K + S   GG      ++ L+ +AE+   H    +++A   + ER +   + G  F+ +
Sbjct: 177 KKGDASYLQGGPGFASEVRVLMAQAESHASHTHILMQVANITYVERVVALFLFGAHFSIF 236

Query: 126 FLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
              ++  P++A R++GYL EE+V  +T  + D+  G   +   P  A DYW L
Sbjct: 237 SFLFVFCPRMAFRLMGYLGEESVVIWTHMINDIVLGKIGDRAIPRAAFDYWSL 289


>gi|41058332|gb|AAR99158.1| mitochondrial alternative oxidase [Petunia x hybrida]
          Length = 42

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRI 139
           MTF+E+A+P+WYERALVF VQGVFFNAYF  YL SPKLAHRI
Sbjct: 1   MTFMEVAKPKWYERALVFTVQGVFFNAYFATYLLSPKLAHRI 42


>gi|110288605|gb|ABB46743.2| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 264

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 39/47 (82%)

Query: 149 NSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +SYTE+LKD+E G  EN P P IAIDYWRLP D+TL+DVVVV+ ADE
Sbjct: 188 DSYTEYLKDIEAGKIENVPTPPIAIDYWRLPADATLKDVVVVVCADE 234


>gi|71748286|ref|XP_823198.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|70832866|gb|EAN78370.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 351

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGM 66
           A L      HH+P  + D      V+ L++     F+ R++  A +L+ +   P M G +
Sbjct: 79  AALERETLNHHEPNCWNDYCCVSLVKLLRWCADKLFRERYIHRATMLKAIAPAPAMAGAI 138

Query: 67  LLHCKS-LRKFEHS--------GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
           + + +  LRK + +           ++ L+ + E+   H+   + +      ER     +
Sbjct: 139 VANLRMYLRKKDATYLPSDGNFSSEVRVLMAQMESHAAHVNILLSMCEITTVERVAAVLL 198

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWR 177
            G+ +  + L +L  P++A R++GYL EE+V  +T  + D+E G     P P  A+ YW 
Sbjct: 199 YGLHYFIFTLLFLLYPRMAFRLMGYLNEESVVIWTHMINDVELGKIVERPIPRAALQYWG 258

Query: 178 L 178
           L
Sbjct: 259 L 259


>gi|293338882|gb|ADE43748.1| alternative oxidase [Spraguea lophii]
          Length = 78

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 48/77 (62%)

Query: 62  MVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVF 121
           MVGG+  H  SLR    +   I+ LL+EAENER HL+TF+++ +P  ++R ++   Q VF
Sbjct: 1   MVGGLFHHLYSLRNLVDNKERIQILLKEAENERQHLLTFLKIMKPNIFDRFVIKITQAVF 60

Query: 122 FNAYFLAYLASPKLAHR 138
           FN Y + Y   P+  HR
Sbjct: 61  FNTYMVFYFLFPRTCHR 77


>gi|261333103|emb|CBH16098.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 351

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 7   ADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGM 66
           A L      HH+P  + D      V+ L++     F+ R++  A +L+ +   P M G +
Sbjct: 79  AALERETLNHHEPNCWNDYCCVSLVKLLRWCADKLFRERYIHRATMLKAIAPAPAMAGAI 138

Query: 67  LLHCKS-LRKFEHS--------GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAV 117
           + + +  LRK + +           ++ L+ + E+   H+   + +      ER     +
Sbjct: 139 VANLRMYLRKKDATYLPSHGNFSSEVRVLMAQMESHAAHVNILLSMCEITTVERVAAVLL 198

Query: 118 QGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWR 177
            G+ +  + L +   P++A R++GYL EE+V  +T  + D+E G     P P  A+ YW 
Sbjct: 199 YGLHYFIFTLLFFLYPRMAFRLMGYLNEESVVIWTHMINDVELGKIVERPIPRAALQYWG 258

Query: 178 L 178
           L
Sbjct: 259 L 259


>gi|118429715|gb|ABK91846.1| mitochondrial alternative oxidase [Cryptosporidium parvum]
          Length = 187

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 8/92 (8%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   +++ H     C  ++ LETV  VPGMV
Sbjct: 96  NVQKTHLCPNGFKDKMSYYLVIALRKSFDLLTRYKKGHNEYQWCRRIIFLETVAGVPGMV 155

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
           G ML H  SLRK +   GWI  LLEEAENE++
Sbjct: 156 GAMLRHFSSLRKMKRDNGWIHTLLEEAENEKI 187


>gi|118429717|gb|ABK91847.1| mitochondrial alternative oxidase [Cryptosporidium suis]
          Length = 187

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 8/92 (8%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   +++ H     C  ++ LETV  VPGMV
Sbjct: 96  NVQKTHLCPNGFKDKMSYYLVIALRKSFDLLTRYKKGHNEYQWCRRIIFLETVAGVPGMV 155

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
           G ML H  SLRK +   GWI  LLEEAENE++
Sbjct: 156 GAMLRHFSSLRKMKRDNGWIHTLLEEAENEKI 187


>gi|294462859|gb|ADE76971.1| unknown [Picea sitchensis]
          Length = 240

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 37/46 (80%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRH 46
           PWETY  D+SI++ KHH P+ + DKFAYWTV++L+FPT +FFQ  H
Sbjct: 179 PWETYTPDMSIDLKKHHVPKTFLDKFAYWTVKSLRFPTDVFFQDIH 224


>gi|41058328|gb|AAR99156.1| mitochondrial alternative oxidase [Petunia x hybrida]
          Length = 42

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 35/42 (83%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRI 139
           MT +EL +P+WYER LV AVQGVFFN YF+ YL SPKLAHRI
Sbjct: 1   MTMVELVQPKWYERLLVLAVQGVFFNLYFVLYLVSPKLAHRI 42


>gi|1478343|gb|AAC34192.1| alternative oxidase Aox1 precursor [Glycine max]
          Length = 40

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
           MTF+E+A+P+WYERALV  VQGVFFNAYFL YL SPK AH
Sbjct: 1   MTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAH 40


>gi|118429709|gb|ABK91843.1| mitochondrial alternative oxidase [Cryptosporidium baileyi]
 gi|118429713|gb|ABK91845.1| mitochondrial alternative oxidase [Cryptosporidium baileyi]
          Length = 187

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 8/92 (8%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   +++RH     C  ++ LETV  VPGMV
Sbjct: 96  NVQKTHFCPNGFKDKISYYLVIALRKSFDLLTRYKKRHNEYQWCRRIIFLETVAGVPGMV 155

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENERM 95
           G ML H  SLRK +   G I  LLEEAENE++
Sbjct: 156 GAMLRHFSSLRKMKRDNGLIHTLLEEAENEKI 187


>gi|427724949|ref|YP_007072226.1| plastoquinol oxidase immutans [Leptolyngbya sp. PCC 7376]
 gi|427356669|gb|AFY39392.1| plastoquinol oxidase immutans [Leptolyngbya sp. PCC 7376]
          Length = 235

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 78/185 (42%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  +  R      +LETV  VP      +LH      F     W+K    E+
Sbjct: 6   VSILVFVINKVYANRPYPRFYVLETVARVPYFSYLSVLHLYETLGFWRKADWLKIHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L     W +RAL   V   ++      Y+ SP+ A+R +  +EE A  
Sbjct: 66  WNELHHLLIMESLGGSNFWLDRALAKTVALAYYWIIVGIYIVSPRSAYRFMELVEEHAYA 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           +Y +FLK  E  + +  PAPAIAI+Y+                   R P    L DV V 
Sbjct: 126 TYDKFLK-AEAETLKGQPAPAIAINYYRDGDLYLFDEFQTGQIPEHRRPKVDNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|118429707|gb|ABK91842.1| mitochondrial alternative oxidase [Cryptosporidium meleagridis]
 gi|118429711|gb|ABK91844.1| mitochondrial alternative oxidase [Cryptosporidium baileyi]
          Length = 186

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 8/91 (8%)

Query: 12  NVTKHH-KPENYRDKFAYWTVQALKFPTHLF--FQRRHM----CHAML-LETVGAVPGMV 63
           NV K H  P  ++DK +Y+ V AL+    L   +++RH     C  ++ LETV  VPGMV
Sbjct: 96  NVQKTHFCPNGFKDKISYYLVIALRKSFDLLTRYKKRHNEYQWCRRIIFLETVAGVPGMV 155

Query: 64  GGMLLHCKSLRKFEHSGGWIKALLEEAENER 94
           G ML H  SLRK +   G I  LLEEAENE+
Sbjct: 156 GAMLRHFSSLRKMKRDNGLIHTLLEEAENEK 186


>gi|37520170|ref|NP_923547.1| oxidase [Gloeobacter violaceus PCC 7421]
 gi|35211163|dbj|BAC88542.1| oxidase [Gloeobacter violaceus PCC 7421]
          Length = 238

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F   + ++ R      +LETV  VP      +LH            W+K    E 
Sbjct: 6   VSILVFVIDVLYKNRPYPRFYVLETVARVPYFSYLSVLHLYETLGLWRKSDWLKVHFAET 65

Query: 91  ENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L    +WY+R L  +   V++    + Y+ SP+ A+  +  +EE A +
Sbjct: 66  WNELHHLLIMESLGGNDRWYDRLLAKSSALVYYWVIVVLYMISPRSAYEFMRQVEEHAFH 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           +Y EFLK  +    +  PAP +A+ Y+                   R P   TL DV V 
Sbjct: 126 TYDEFLKS-DGERLKLQPAPVVAVSYYLTGDLYMFDEFQTSRRPEERRPACDTLYDVFVN 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|428219613|ref|YP_007104078.1| plastoquinol oxidase immutans [Pseudanabaena sp. PCC 7367]
 gi|427991395|gb|AFY71650.1| plastoquinol oxidase immutans [Pseudanabaena sp. PCC 7367]
          Length = 243

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  ++ ++ R +    +LETV  VP      +LH      F     W+K    E+
Sbjct: 6   VSILVFVINVLYRDRPIPRFYVLETVARVPYFAYLSVLHLYETLGFWRRADWLKVHFAES 65

Query: 91  ENERMHLMTFIEL-ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+   EL      ++R L      V++      Y+ +PK A+  +  +EE A +
Sbjct: 66  WNELHHLLIAEELGGNNNPFDRLLAKTAALVYYWIVVGIYVVNPKAAYHFMEMVEEHAYH 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           +Y E+LK+ E    ++ PAPAIA+ Y+                   R P    L DV V 
Sbjct: 126 TYDEYLKENE-AELKSKPAPAIAVKYYRDGDLYLFDEFQTGQVANSRRPKVDNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|1478345|gb|AAB36072.1| Aox2 [Glycine max]
          Length = 40

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 34/40 (85%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAH 137
           MT +EL +P+WYER LV AVQGVFFNA+F+ Y+ SPK+AH
Sbjct: 1   MTMVELVKPKWYERLLVLAVQGVFFNAFFVLYILSPKVAH 40


>gi|443311406|ref|ZP_21041035.1| Alternative oxidase [Synechocystis sp. PCC 7509]
 gi|442778603|gb|ELR88867.1| Alternative oxidase [Synechocystis sp. PCC 7509]
          Length = 247

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L+   + F++ R      +LETV  VP      +LH      +     WIK    E+
Sbjct: 6   VNILEALLNTFYRTRIYPRFYVLETVARVPYFAFTSVLHLYETMGWWRKADWIKVHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L   Q W +R +      V++      Y+ SP+ A+  +  +EE A +
Sbjct: 66  WNELHHLLIAESLGGNQYWIDRFVAHTGAFVYYWIVVFVYVLSPRHAYNFMQQVEEHAYH 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           +Y  F+K+      +  PAP IAI+Y+                   R P    L DV V 
Sbjct: 126 TYNAFIKE-HGDELKTLPAPQIAINYYQDGDLYLFDEFQTTRVPQERRPKIENLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IREDE 189


>gi|428307127|ref|YP_007143952.1| plastoquinol oxidase immutans [Crinalium epipsammum PCC 9333]
 gi|428248662|gb|AFZ14442.1| plastoquinol oxidase immutans [Crinalium epipsammum PCC 9333]
          Length = 240

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH      +     W+K    E+
Sbjct: 6   VDVLVFVINTLYRDRAYQRFYVLETVARVPYFSFLSVLHLYETLGWWRKADWLKVHFAES 65

Query: 91  ENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L     W +R        V++      YL SP+ A+  +  +EE A +
Sbjct: 66  WNELHHLLIMESLGGNKHWGDRLFAQTTALVYYWVVVALYLVSPRTAYNFMQLVEEHAHH 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYWR-------------LPPDS------TLRDVVVV 190
           +Y  F+K+ E    + APAP +AI+Y+R             + P+S       L DV V 
Sbjct: 126 TYETFVKEHE-AELKAAPAPLVAINYYRDGDLYLFDEFQTGVKPESRRPAVDNLYDVFVN 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|397630745|gb|EJK69895.1| hypothetical protein THAOC_08808 [Thalassiosira oceanica]
          Length = 154

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 9/93 (9%)

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAP--- 167
           R  V   Q  F   +  AY+ SP   HR VGY+EEEA ++YT  +++++    E  P   
Sbjct: 9   RVAVVGSQFGFGCFFLTAYIISPAWCHRFVGYIEEEACHTYTRIVEEIQKAP-EGTPLAE 67

Query: 168 -----APAIAIDYWRLPPDSTLRDVVVVIRADE 195
                AP IA  YW L  + T+ DV++ +RADE
Sbjct: 68  WRTQAAPKIAKGYWHLGEEGTVYDVMMAVRADE 100


>gi|427419241|ref|ZP_18909424.1| Alternative oxidase [Leptolyngbya sp. PCC 7375]
 gi|425761954|gb|EKV02807.1| Alternative oxidase [Leptolyngbya sp. PCC 7375]
          Length = 219

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH      +     W+K    E+
Sbjct: 6   VGILVFVINTVYKNRPYPRFYVLETVARVPYFSYLSVLHLYETLGWWRKVDWLKVHFAES 65

Query: 91  ENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+   EL    QW +R L   V  +++      Y  +P+ A+  +  +EE A  
Sbjct: 66  WNELHHLLIMEELGGSQQWIDRFLARHVALLYYWIIVAIYAVNPRAAYHFMELVEEHAYA 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL+  E  + +  PAP +AI Y+                   R P    L DV V 
Sbjct: 126 SYDKFLQSNE-AALKQEPAPQVAISYYRDGDLYMFDEFQTARPPTERRPQIKNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|119713229|gb|ABL97296.1| possible alternative respiratory pathway oxidase, partial
           [uncultured marine bacterium HF10_05C07]
          Length = 62

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query: 151 YTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           YTE+L +++ G  EN  AP IAI+YW L  D+TLRDVV+ +R DE
Sbjct: 1   YTEYLDEIDKGQIENTQAPEIAINYWNLSKDATLRDVVIAVRNDE 45


>gi|440684015|ref|YP_007158810.1| plastoquinol oxidase immutans [Anabaena cylindrica PCC 7122]
 gi|428681134|gb|AFZ59900.1| plastoquinol oxidase immutans [Anabaena cylindrica PCC 7122]
          Length = 228

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH      F     W+K    E+
Sbjct: 6   VGILVFVINTVYRDRPYPRFYVLETVARVPYFSYLSVLHLYETLGFWRKADWLKVHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L   Q W +R L      +++      Y+ S   A+  +  +E  A +
Sbjct: 66  WNELHHLLIMESLGGSQFWGDRILARTTALIYYWIIVALYIVSSSSAYNFMELVENHAYD 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL + E    +  PAPA+AI+Y+                   R P    L DV V 
Sbjct: 126 SYQKFLTEHE-AELKLQPAPAVAINYYRDGDLYMFDEFQTANSPETRRPKVDNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|145520557|ref|XP_001446134.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413611|emb|CAK78737.1| unnamed protein product [Paramecium tetraurelia]
          Length = 143

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 27/137 (19%)

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAY 125
           M  H +SLR+ +   GWI  LLEEAENER+HL+TF+++ +       ++    G F    
Sbjct: 1   MHRHLRSLRRMKIDQGWIHTLLEEAENERIHLLTFLKIKKT-----LIIIQNWGSF---- 51

Query: 126 FLAYLASP--KLAHRIVGYLEEEAVNSYTEFLKDLENGS-----FENAPAPAIAIDYWRL 178
             +YL  P   +   ++G L+           K  ++GS     +    A   +I+YW L
Sbjct: 52  --SYLVIPISSVLKSVIGLLDT---------WKMWQDGSPPIHQWTLRKANHHSIEYWGL 100

Query: 179 PPDSTLRDVVVVIRADE 195
             D+TL DVV  IR DE
Sbjct: 101 EDDATLFDVVKGIRKDE 117


>gi|158333679|ref|YP_001514851.1| alternative oxidase [Acaryochloris marina MBIC11017]
 gi|158303920|gb|ABW25537.1| alternative oxidase, putative [Acaryochloris marina MBIC11017]
          Length = 221

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 26/189 (13%)

Query: 27  AYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL 86
           A+W   ++K      +  R      +LETV  VP      +LH            W+K  
Sbjct: 2   AFWCFSSIKI-----YANRPYPRFYVLETVARVPYFSYLSVLHLYETLGLWRKADWLKIH 56

Query: 87  LEEAENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEE 145
             E+ NE  HL+    L   + W +R L      +++      Y+ SP+ A+  +  +EE
Sbjct: 57  FAESWNELHHLLIMESLGGAEFWGDRLLAKTTALIYYWVIAALYVVSPRSAYHFMELVEE 116

Query: 146 EAVNSYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRD 186
            A  SY +FL+  E    +  PAP +AI Y+                   R P   TL D
Sbjct: 117 HAYASYDKFLQS-EAEHLKTLPAPDVAIQYYQDGDLYMFDEFQTAHQAAERRPQVDTLYD 175

Query: 187 VVVVIRADE 195
           V V IR DE
Sbjct: 176 VFVAIRDDE 184


>gi|449455371|ref|XP_004145426.1| PREDICTED: ubiquinol oxidase 4, chloroplastic/chromoplastic-like
           [Cucumis sativus]
 gi|449525172|ref|XP_004169592.1| PREDICTED: ubiquinol oxidase 4, chloroplastic/chromoplastic-like
           [Cucumis sativus]
          Length = 355

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
           F+  RH     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 120 FYHDRHYARFFVLETIARVPYFAFVSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 179

Query: 101 IELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++      Y+ SP++A+     +E  A ++Y +FLK  E
Sbjct: 180 EELGGNDWWFDRFLAQHIAVAYYFMTVFMYMISPRMAYHFSECVESHAFSTYDKFLK-AE 238

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A+ Y+                   R P   +L DV + IR DE
Sbjct: 239 GEELKKQPAPEVAVKYYTEGDLYLFDEFQTSRAPKSRRPKIESLYDVFMNIRDDE 293


>gi|359459267|ref|ZP_09247830.1| alternative oxidase [Acaryochloris sp. CCMEE 5410]
          Length = 219

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 21/164 (12%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-RPQWYE 110
           +LETV  +P      +LH      F     W+K    E+ NE  HL+    L    +W +
Sbjct: 27  VLETVARIPYFSYLSVLHFYETLGFWRRADWLKVHFAESWNELHHLLIMEALGGDKKWID 86

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           R L   V  +++      Y+ SP+ A+  +  +E+EA  +Y  FL D      ++ PAP 
Sbjct: 87  RFLARHVALLYYWIVVALYVVSPRSAYHFMELVEQEAFQTYNSFLHD-HAEELKSQPAPQ 145

Query: 171 IAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           IA+ Y+                   R P    L DV V IR DE
Sbjct: 146 IAVSYYRDGDLYMFDEFQSARVPEERRPAVDNLYDVFVNIRDDE 189


>gi|167405745|gb|ABZ79700.1| alternative oxidase [Solanum lycopersicum]
          Length = 163

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 31/38 (81%)

Query: 1   PWETYKADLSINVTKHHKPENYRDKFAYWTVQALKFPT 38
           PW  Y+AD+SI++TKHH P  + DKFAYWTV+ L+FPT
Sbjct: 125 PWHPYEADMSIDLTKHHAPVTFLDKFAYWTVKILRFPT 162


>gi|168043241|ref|XP_001774094.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674640|gb|EDQ61146.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 240

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 27/179 (15%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMT 99
           +F++ R      +LET+  VP      +LH      +     +IK    E+ NE  HL+T
Sbjct: 30  IFYKNRDYARFYVLETIARVPYFAFVSVLHMYESFGWWRRSDYIKVHFAESWNELHHLLT 89

Query: 100 FIELARPQ-WYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFL 155
              L   + W +R   F  Q +    YF+    YL SP++A+     +E+ A ++Y EF+
Sbjct: 90  MEALGGDERWVDR---FLAQHIAVGYYFMTVVMYLLSPRMAYHFSECVEKHAFHTYDEFI 146

Query: 156 KDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           K L     +  PAP +A+ Y+                   R P    L DV   IR DE
Sbjct: 147 K-LHGEELKKLPAPEVAVKYYTSGDLYLFDEFQTDRTPNTRRPKIDNLYDVFYNIREDE 204


>gi|350536613|ref|NP_001234511.1| plastid quinol oxidase [Solanum lycopersicum]
 gi|9937099|gb|AAG02286.1|AF177979_1 plastid terminal oxidase [Solanum lycopersicum]
 gi|9937101|gb|AAG02287.1|AF177980_1 plastid terminal oxidase [Solanum lycopersicum]
 gi|10505366|gb|AAG18449.1|AF302931_1 plastid quinol oxidase [Solanum lycopersicum]
 gi|10505368|gb|AAG18450.1|AF302932_1 plastid quinol oxidase [Solanum lycopersicum]
          Length = 366

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            +  R+     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 134 LYHNRNYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYMKVHFAESWNEMHHLLIM 193

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++    L Y  SP++A+     +E  A  +Y +F+KD +
Sbjct: 194 EELGGNAWWFDRFLAQHIAIFYYFMTVLMYALSPRMAYHFSECVESHAYETYDKFIKD-Q 252

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +N PAP IA+DY+                   R P    L DV + IR DE
Sbjct: 253 GEELKNLPAPKIAVDYYTGGDLYLFDEFQTSREPNTRRPKIDNLYDVFMNIRDDE 307


>gi|158339790|ref|YP_001520797.1| alternative oxidase, putative [Acaryochloris marina MBIC11017]
 gi|158310031|gb|ABW31647.1| alternative oxidase, putative [Acaryochloris marina MBIC11017]
          Length = 226

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  +  R      +LETV  VP      +LH            W+K    E+
Sbjct: 6   VGILVFVINKIYANRPYPRFYVLETVARVPYFSYLSVLHLYETLGLWRKADWLKIHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L   + W +R L      +++    + Y+ SP+ A+  +  +EE A  
Sbjct: 66  WNELHHLLIMESLGGAEFWGDRFLAKTTALIYYWVIAVLYVVSPRSAYHFMELVEEHAYA 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL+  E    +  PAP +AI Y+                   R P   TL DV V 
Sbjct: 126 SYDKFLQT-EAEHLKTLPAPDVAIQYYRDGDLYMFDEFQTAHQAAERRPQVDTLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|158334717|ref|YP_001515889.1| alternative oxidase [Acaryochloris marina MBIC11017]
 gi|158304958|gb|ABW26575.1| alternative oxidase, putative [Acaryochloris marina MBIC11017]
          Length = 219

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 21/164 (12%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-RPQWYE 110
           +LETV  +P      +LH      F     W+K    E+ NE  HL+    L    +W +
Sbjct: 27  VLETVARIPYFSYLSVLHFYETLGFWRRADWLKVHFAESWNELHHLLIMEALGGDKKWID 86

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           R L   V  +++      Y+ SP+ A+  +  +E+EA  +Y  FL D      +  PAP 
Sbjct: 87  RFLARHVALLYYWIVVALYVVSPRSAYHFMELVEQEAFQTYNSFLHD-HAEELKGQPAPQ 145

Query: 171 IAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           IA+ Y+                   R P    L DV V IR DE
Sbjct: 146 IAVSYYRDGDLYMFDEFQSARVPEERRPAVDNLYDVFVNIRDDE 189


>gi|363807489|ref|NP_001242139.1| uncharacterized protein LOC100813378 [Glycine max]
 gi|255635539|gb|ACU18120.1| unknown [Glycine max]
          Length = 332

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            +  RH     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 103 LYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 162

Query: 101 IEL-ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++    L Y  SP++A+     +E  A  +Y +F+K ++
Sbjct: 163 EELGGNAWWFDRFLAQHIAIFYYIMTVLMYAVSPRMAYHFSECVESHAFETYDKFIK-VQ 221

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A++Y+                   R P    L DV V IR DE
Sbjct: 222 GDELKKMPAPEVAVNYYTGDDLYLFDEFQTSRVPNSRRPKIENLYDVFVNIRDDE 276


>gi|255615497|ref|XP_002539678.1| hypothetical protein RCOM_1998260 [Ricinus communis]
 gi|223503608|gb|EEF22705.1| hypothetical protein RCOM_1998260 [Ricinus communis]
          Length = 65

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 39/60 (65%)

Query: 10 SINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLH 69
          +I+++ HHKP    D  A+  V+AL+F    FF +R+   A++LETV AVPGMVG  L H
Sbjct: 5  AIDLSIHHKPAGVSDTIAFGFVKALRFCADTFFAKRYGHRAVVLETVAAVPGMVGATLNH 64


>gi|356555706|ref|XP_003546171.1| PREDICTED: alternative oxidase 4, chloroplastic/chromoplastic-like
           [Glycine max]
          Length = 332

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            +  RH     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 103 LYHDRHYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 162

Query: 101 IEL-ARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++    L Y  SP++A+     +E  A  +Y +F+K ++
Sbjct: 163 EELGGNAWWFDRFLAQHIAIFYYIMTVLMYAVSPRMAYHFSECVESHAFETYDKFIK-VQ 221

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A++Y+                   R P    L DV V IR DE
Sbjct: 222 GDELKKMPAPEVAVNYYTGDDLYLFDEFQTSRVPNSRRPKIENLYDVFVNIRDDE 276


>gi|359464162|ref|ZP_09252725.1| alternative oxidase, putative [Acaryochloris sp. CCMEE 5410]
          Length = 226

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 74/185 (40%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  +  R      +LETV  VP      +LH            W+K    E+
Sbjct: 6   VGILVFVINKIYANRPYPRFYVLETVARVPYFSYLSVLHLYETLGLWRKADWLKIHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L   + W +R L      +++      Y+ SP+ A+  +  +EE A  
Sbjct: 66  WNELHHLLIMESLGGAEFWGDRLLAKTTALIYYWVIAALYVVSPRSAYHFMELVEEHAYA 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL+  E    +  PAP IAI Y+                   R P   TL DV V 
Sbjct: 126 SYDKFLQ-AEAEHLKTLPAPDIAIQYYRDGDLYMFDEFQTAHQAAERRPQVDTLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|428315519|ref|YP_007113401.1| plastoquinol oxidase immutans [Oscillatoria nigro-viridis PCC 7112]
 gi|428239199|gb|AFZ04985.1| plastoquinol oxidase immutans [Oscillatoria nigro-viridis PCC 7112]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 75/185 (40%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  ++ +  R      +LETV  VP      +LH      +     W+K    E+
Sbjct: 6   VGILVFAINVVYADRPYPRFYVLETVARVPYFSYLSVLHLYETLGWWRKADWLKIHFSES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L     W +R L  A   +++    L Y+ S K A+  +  +E  A  
Sbjct: 66  WNELHHLLIMESLGGSAFWGDRLLARATALIYYWIIILVYMVSSKSAYNFMELVEGHAYA 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL + E  + +  PAP +A+ Y+                   R P    L DV V 
Sbjct: 126 SYDKFL-NAEAEALKQQPAPDVALQYYRDGDLYMFDEFQTSSANVFRRPKIDNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|340057568|emb|CCC51914.1| conserved hypothetical protein, fragment, partial [Trypanosoma
           vivax Y486]
          Length = 205

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 51/96 (53%)

Query: 83  IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGY 142
           ++ L+ +AE+   H    +++A   + ER +   + G  F+ +   ++  P++A R++GY
Sbjct: 7   VRVLMAQAESHASHTHILMQVANITYVERVVALFLFGAHFSIFSFLFVFCPRMAFRLMGY 66

Query: 143 LEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
           L EE+V  +T  + D+  G   +   P  A DYW L
Sbjct: 67  LGEESVVIWTHMINDIVLGKIGDRAIPRAAFDYWSL 102


>gi|32307546|gb|AAP79178.1| quinol-to-oxygen oxidoreductase [Bigelowiella natans]
          Length = 291

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 73/182 (40%), Gaps = 33/182 (18%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL------LEEAENER 94
            F  R +     LETV  +P +    +LH      +E  G W +A         E  NE 
Sbjct: 68  LFDGRPLERFWFLETVARMPYLSYVTMLHL-----YESFGWWRRAAAVKRVHFAEEWNEF 122

Query: 95  MHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTE 153
            HL+TF  L   + W  R L      V++    L +L SP LA+     +E  AV++Y E
Sbjct: 123 HHLLTFEALGGDRSWATRFLAQHAAIVYYWVLVLMWLLSPTLAYNFSELIEAHAVDTYGE 182

Query: 154 FLKDLENGSFENAPAPAIAIDYW--------------------RLPPDSTLRDVVVVIRA 193
           F  D      +  PAP IAI YW                    R P  + L DV+  IR 
Sbjct: 183 F-ADANEELMKELPAPGIAIQYWMGGDMYLYDEFQTERRLGDERRPNITNLYDVICAIRD 241

Query: 194 DE 195
           DE
Sbjct: 242 DE 243


>gi|9937103|gb|AAG02288.1|AF177981_1 plastid terminal oxidase [Capsicum annuum]
          Length = 357

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            +  RH     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 125 LYHDRHYARFFVLETIARVPYFAFISVLHLYESFGWWRRADYLKVHFAESWNEMHHLLIM 184

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++      Y  SP++A+     +E  A  +Y +F+KD E
Sbjct: 185 EELGGNAWWFDRFLAQHIAVFYYFMTVSMYALSPRMAYHFSECVEHHAYETYDKFIKDQE 244

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP IA+ Y+                   R P    L DV + IR DE
Sbjct: 245 -AELKKLPAPKIAVSYYTGGDLYLFDEFQTSREPNTRRPKIDNLYDVFMNIRDDE 298


>gi|428223604|ref|YP_007107701.1| plastoquinol oxidase immutans [Geitlerinema sp. PCC 7407]
 gi|427983505|gb|AFY64649.1| plastoquinol oxidase immutans [Geitlerinema sp. PCC 7407]
          Length = 233

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH            W+K    E+
Sbjct: 6   VGILVFVINTLYRDRPYPRFYVLETVARVPYFAYMSVLHLYESLGLWRKADWLKVHFAES 65

Query: 91  ENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L    +W +R +       ++    L YL SP+ A+  +  +E+ A +
Sbjct: 66  WNELHHLLIMESLGGNDRWVDRFVARHAALAYYWLVVLLYLFSPRSAYHFMELVEQHAYH 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYWR 177
           +Y  FL++ E  + +  PAPA+A++Y+R
Sbjct: 126 TYDVFLQENE-AALKAEPAPAVAVNYYR 152


>gi|2832676|emb|CAA16776.1| putative protein [Arabidopsis thaliana]
 gi|7269072|emb|CAB79181.1| putative protein [Arabidopsis thaliana]
          Length = 335

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 5/159 (3%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R      +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 123 LYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIM 182

Query: 101 IELARPQW-YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL    W ++R L   +   ++      Y+ SP++A+     +E  A  +Y +FLK   
Sbjct: 183 EELGGNSWWFDRFLAQHIATFYYFMTVFLYILSPRMAYHFSECVESHAYETYDKFLK-AS 241

Query: 160 NGSFENAPAPAIAIDYWR---LPPDSTLRDVVVVIRADE 195
               +N PAP IA+ Y+    L     L DV V IR DE
Sbjct: 242 GEELKNMPAPDIAVKYYTGGDLYLFENLYDVFVNIRDDE 280


>gi|388507484|gb|AFK41808.1| unknown [Medicago truncatula]
          Length = 342

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 111 LYRDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 170

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++    L YL SP++A+     +E  A  +Y +F+K+ +
Sbjct: 171 EELGGNAWWFDRFLAQHIAIFYYFMTALMYLISPRMAYHFSECVESHAFETYDKFIKE-Q 229

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A++Y+                   R P    L DV + IR DE
Sbjct: 230 GEELKKMPAPEVAVNYYTGGDLYLFDEFRTSRVPNTRRPTIDNLYDVFLNIRDDE 284


>gi|357447777|ref|XP_003594164.1| Alternative oxidase [Medicago truncatula]
 gi|87240787|gb|ABD32645.1| Alternative oxidase [Medicago truncatula]
 gi|355483212|gb|AES64415.1| Alternative oxidase [Medicago truncatula]
          Length = 342

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 111 LYRDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 170

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +   ++    L YL SP++A+     +E  A  +Y +F+K+ +
Sbjct: 171 EELGGNAWWFDRFLAQHIAIFYYFMTALMYLISPRMAYHFSECVESHAFETYDKFIKE-Q 229

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A++Y+                   R P    L DV + IR DE
Sbjct: 230 GEELKKMPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPTIDNLYDVFLNIRDDE 284


>gi|116783028|gb|ABK22767.1| unknown [Picea sitchensis]
          Length = 347

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 37/183 (20%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGW-----IKALLEEAENERM 95
            +  RH     +LET+  VP      +LH      +E  G W     +K    E+ NE  
Sbjct: 111 LYSERHYARFYVLETIARVPYFAFVSVLH-----MYESFGWWRRTDYLKVHFAESWNELH 165

Query: 96  HLMTFIELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSY 151
           HL+    L    +W++R   F  Q +    YF+    Y+ SP++A+     +E+ A ++Y
Sbjct: 166 HLLIMEALGGNERWFDR---FLAQHIAVFYYFMTASMYILSPRMAYHFSECVEKHAYSTY 222

Query: 152 TEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIR 192
            EF+K L+    +  PAP +A+ Y+                   R P    L DV V IR
Sbjct: 223 DEFIK-LQGEELKKLPAPDVAVKYYTQGDLYLFDEFQTDRTPCSRRPKVENLYDVFVNIR 281

Query: 193 ADE 195
            DE
Sbjct: 282 DDE 284


>gi|297799790|ref|XP_002867779.1| hypothetical protein ARALYDRAFT_492640 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313615|gb|EFH44038.1| hypothetical protein ARALYDRAFT_492640 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 351

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R      +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 123 LYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIM 182

Query: 101 IELARPQW-YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL    W ++R L   +   ++      Y+ SP++A+     +E  A  +Y +FLK   
Sbjct: 183 EELGGNSWWFDRFLAQHIATFYYFMTVFLYILSPRMAYHFSECVESHAYETYDKFLK-TS 241

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +N PAP IA+ Y+                   R P    L DV V IR DE
Sbjct: 242 GEELKNMPAPDIAVKYYTGSDLYLFDEFQTSRAPNTRRPVIENLYDVFVNIRDDE 296


>gi|18415888|ref|NP_567658.1| alternative oxidase 4 [Arabidopsis thaliana]
 gi|85681033|sp|Q56X52.2|AOX4_ARATH RecName: Full=Ubiquinol oxidase 4, chloroplastic/chromoplastic;
           AltName: Full=Alternative oxidase 4; AltName:
           Full=Plastid terminal oxidase; AltName: Full=Protein
           IMMUTANS; Flags: Precursor
 gi|11692822|gb|AAG40014.1|AF324663_1 AT4g22260 [Arabidopsis thaliana]
 gi|11908102|gb|AAG41480.1|AF326898_1 unknown protein [Arabidopsis thaliana]
 gi|12642914|gb|AAK00399.1|AF339717_1 unknown protein [Arabidopsis thaliana]
 gi|4138855|gb|AAD03599.1| IMMUTANS [Arabidopsis thaliana]
 gi|15010796|gb|AAK74057.1| AT4g22260/T10I14_90 [Arabidopsis thaliana]
 gi|23308315|gb|AAN18127.1| At4g22260/T10I14_90 [Arabidopsis thaliana]
 gi|332659183|gb|AEE84583.1| alternative oxidase 4 [Arabidopsis thaliana]
          Length = 351

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R      +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 123 LYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIM 182

Query: 101 IELARPQW-YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL    W ++R L   +   ++      Y+ SP++A+     +E  A  +Y +FLK   
Sbjct: 183 EELGGNSWWFDRFLAQHIATFYYFMTVFLYILSPRMAYHFSECVESHAYETYDKFLK-AS 241

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +N PAP IA+ Y+                   R P    L DV V IR DE
Sbjct: 242 GEELKNMPAPDIAVKYYTGGDLYLFDEFQTSRTPNTRRPVIENLYDVFVNIRDDE 296


>gi|3929647|emb|CAA06190.1| Immutans protein [Arabidopsis thaliana]
          Length = 351

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R      +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 123 LYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFAESWNEMHHLLIM 182

Query: 101 IELARPQW-YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL    W ++R L   +   ++      Y+ SP++A+     +E  A  +Y +FLK   
Sbjct: 183 EELGGNSWWFDRFLAQHIATFYYFMTVFLYILSPRMAYHFSECVESHAYETYDKFLK-AS 241

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +N PAP IA+ Y+                   R P    L DV V IR DE
Sbjct: 242 GEELKNMPAPDIAVKYYTGGDLYLFDEFQTSRTPNTRRPVIENLYDVFVNIRDDE 296


>gi|154346286|ref|XP_001569080.1| putative alternative oxidase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066422|emb|CAM44214.1| putative alternative oxidase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 486

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 76  FEHS-GGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
            EHS G  ++ L  + E+  +H      +      ER LV  +Q + F  Y   +L  P+
Sbjct: 231 LEHSYGKELRGLFAQCESHSVHYQVLSCMTEITLAERGLVLLLQAIHFTIYLALFLFYPR 290

Query: 135 LAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
           +  R++ Y  EE+   +T+ + D++ G       P +A+ YW L
Sbjct: 291 MGFRLMAYTAEESSVVWTQMVNDVDLGKIAEMCVPQLALQYWGL 334


>gi|81296552|gb|ABB70513.1| plastid terminal oxidase [Coffea canephora]
          Length = 351

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 31/180 (17%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAE-----NERM 95
            +  RH     +LET+  VP      +LH      +E  G W +A L E       NE  
Sbjct: 133 LYHDRHYARFFVLETIARVPYFAFMSVLHL-----YESFGWWRRADLSEVHFAESWNEMH 187

Query: 96  HLMTFIELARPQW-YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEF 154
           HL+   EL    W ++R L   +   ++      Y+ SP++A+     +E  A  +Y +F
Sbjct: 188 HLLIMEELGGNSWWFDRFLAQHIAVFYYFMTVFMYMLSPRMAYHFSECVESHAFETYDKF 247

Query: 155 LKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           +KD +    +  PA  +A+ Y+                   R P    + DV + IR DE
Sbjct: 248 IKD-QGEQLKKLPASNVAVKYYTEGNLYLFDEFQTARPPTSRRPKIENMYDVFLNIRDDE 306


>gi|255086799|ref|XP_002509366.1| predicted protein [Micromonas sp. RCC299]
 gi|226524644|gb|ACO70624.1| predicted protein [Micromonas sp. RCC299]
          Length = 214

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 23/163 (14%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYERA 112
           LETV  VP      +LH      F     ++K    +  NE  HL+    +   + +   
Sbjct: 35  LETVARVPYFSFLSVLHLYETLGFWRRADYLKVHFAQTMNEFHHLLIMESMGGDKRFTDR 94

Query: 113 LVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAP 169
                  VF+  YF+A   YL SP++A+ +   +EE A ++Y EFLK+ E    ++ P P
Sbjct: 95  FFAQHMAVFY--YFIACAMYLVSPRMAYNLSEQVEEHAYHTYDEFLKENE-LELKSKPPP 151

Query: 170 AIAIDYW-----------------RLPPDSTLRDVVVVIRADE 195
            IA  Y+                 R P    L DV V +R DE
Sbjct: 152 PIATHYYTEGDLFLFDEFQTGAARRRPSIDNLYDVFVNVRNDE 194


>gi|302796591|ref|XP_002980057.1| hypothetical protein SELMODRAFT_112145 [Selaginella moellendorffii]
 gi|300152284|gb|EFJ18927.1| hypothetical protein SELMODRAFT_112145 [Selaginella moellendorffii]
          Length = 279

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 21/164 (12%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WYE 110
           +LET+  VP      +LH      +     ++K    E+ NE  HL+    L   + W++
Sbjct: 43  VLETIARVPYFAFVSVLHMYESFGWWRRADYLKVHFAESWNELHHLLVMEALGGDERWFD 102

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           R L   +   ++    L Y  SP++A+     +E+ A ++Y +F+K       +  PAP 
Sbjct: 103 RFLAQHIAVAYYFLTSLMYTISPRMAYHFSECVEKHAFSTYDKFIK-AHGEELKKLPAPQ 161

Query: 171 IAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           +A+DY+                   R P    L DV V IR DE
Sbjct: 162 VAVDYYTKGDLYMFDEFQTDRLPETRRPRVDNLYDVFVNIREDE 205


>gi|302811522|ref|XP_002987450.1| hypothetical protein SELMODRAFT_126113 [Selaginella moellendorffii]
 gi|300144856|gb|EFJ11537.1| hypothetical protein SELMODRAFT_126113 [Selaginella moellendorffii]
          Length = 280

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 21/164 (12%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WYE 110
           +LET+  VP      +LH      +     ++K    E+ NE  HL+    L   + W++
Sbjct: 44  VLETIARVPYFAFVSVLHMYESFGWWRRADYLKVHFAESWNELHHLLVMEALGGDERWFD 103

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           R L   +   ++    L Y  SP++A+     +E+ A ++Y +F+K       +  PAP 
Sbjct: 104 RFLAQHIAVAYYFLTSLMYTISPRMAYHFSECVEKHAFSTYDKFIK-AHGEELKKLPAPQ 162

Query: 171 IAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           +A+DY+                   R P    L DV V IR DE
Sbjct: 163 VAVDYYTKGDLYMFDEFQTDRLPETRRPRVDNLYDVFVNIREDE 206


>gi|397614777|gb|EJK63007.1| hypothetical protein THAOC_16363 [Thalassiosira oceanica]
          Length = 261

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 31/180 (17%)

Query: 41  FFQRRHMCHAML--LETVGAVPGMVGGMLLHCKSLRKFEHSGGW-----IKALLEEAENE 93
           FF+     +A    LET+  VP      +LH      +E  G W     +K    E+ NE
Sbjct: 59  FFEGEDRAYARFYALETIARVPYFSYLSVLHL-----YETLGKWRRAKYLKLHFAESWNE 113

Query: 94  RMHLMTFIELARPQWY-ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYT 152
             HL+   EL   + + +R L   +   ++    L Y+ +P  A+ +   +EE A  +Y 
Sbjct: 114 LHHLLIMEELGGSERFLDRFLAQHIAFGYYAVVILLYVLNPVQAYNLNQDVEEHAFETYD 173

Query: 153 EFLKDLENGSFENAPAPAIAIDYW-----------------RLPPDSTLRDVVVVIRADE 195
           ++LKD E    +N PAP  AIDY+                 R P    L DV V IR DE
Sbjct: 174 KYLKDNEE-KLKNLPAPKAAIDYYVDGDMYMFDEFQTGCEFRRPKIENLYDVFVAIRDDE 232


>gi|75907278|ref|YP_321574.1| oxidase [Anabaena variabilis ATCC 29413]
 gi|75701003|gb|ABA20679.1| plastoquinol oxidase immutans [Anabaena variabilis ATCC 29413]
          Length = 228

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 72/185 (38%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH      +     W+K    E+
Sbjct: 6   VGILVFVINTVYRDRPYPRFYVLETVARVPYFSYLSVLHLYETLGWWRKADWLKVHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L     W +R L      +++      Y  SP+ A+  +  +E+ A +
Sbjct: 66  WNELHHLLIMESLGGAGFWGDRFLAKTAALIYYWIIIAVYFVSPRSAYNFMELVEQHAYS 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL   E    +  PAP +A  Y+                   R P    L DV V 
Sbjct: 126 SYDKFLTTHE-AELKTQPAPEVAKIYYRDGDLYMFDEFQTAHSPSERRPNIDNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|1478347|gb|AAB36073.1| Aox3 [Glycine max]
          Length = 40

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query: 98  MTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPK 134
           MT +EL +P W+ER L+   QGVFFNA+F+ YL SPK
Sbjct: 1   MTMVELVKPSWHERLLILTAQGVFFNAFFVFYLLSPK 37


>gi|9837152|gb|AAG00450.1|AF274001_1 oxidase [Triticum aestivum]
          Length = 224

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 27/197 (13%)

Query: 22  YRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGG 81
           +   F  +    + F   + ++ R      +LET+  VP      +LH      +     
Sbjct: 26  FEQSFNVFLTDTVIFILDILYRDRDYARFFVLETIARVPYFAFISVLHLYETFGWSRRAD 85

Query: 82  WIKALLEEAENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAH 137
            IK    E+ NE  HL+    L     W +R L  A    FF  YF+    Y+ SP++A+
Sbjct: 86  NIKVHFAESMNEFHHLLIMEALGGNSVWLDRFL--ARFSAFF-YYFVTVGMYMLSPRMAY 142

Query: 138 RIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW-------------------RL 178
                +E  A ++Y +FLK L     +  PAP +A++Y+                   R 
Sbjct: 143 HFSECVERHAYSTYDKFLK-LNGEELKKLPAPEVAVNYYMNEDLYMFDEFQTSRAPNSRR 201

Query: 179 PPDSTLRDVVVVIRADE 195
           P    L DV V +R DE
Sbjct: 202 PKVDNLYDVFVNVRDDE 218


>gi|168027826|ref|XP_001766430.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682339|gb|EDQ68758.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 245

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 27/179 (15%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMT 99
           +F++ R      +LET+  +P      +L+      +     ++K    E+ NE  HL+T
Sbjct: 30  VFYKNRDYARFYVLETIARIPYFAFVSVLNMYESFGWWRRADYLKVHFAESWNELHHLLT 89

Query: 100 FIELARPQ-WYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFL 155
              L   + W +R   F  Q +    YF+    YL SP++A+     +++ A ++Y EF+
Sbjct: 90  MEALGGDERWVDR---FLAQHIAVGYYFMTVVMYLLSPRMAYHFSECVKKHAFHTYDEFI 146

Query: 156 KDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
            +L     +N PAP +A+ Y+                   R P    L DV   IR DE
Sbjct: 147 -NLNAEELKNLPAPEVAVKYYTSGDLYLFDEFQTACPPNTRQPKVENLYDVFCNIREDE 204


>gi|449016710|dbj|BAM80112.1| plastid terminal oxidase [Cyanidioschyzon merolae strain 10D]
          Length = 430

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 23/176 (13%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           F  R +     LETV  +P      +LH      + H     +    E  NE  HL+   
Sbjct: 173 FTDRPIARFWFLETVARMPYFSYLSVLHLYETFNWLHLAELRRTHFAEEWNELHHLLIMS 232

Query: 102 ELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
            L    +W +R L + +  +++    + Y+ SP+L++     LE+ AV++Y +FL + E+
Sbjct: 233 ALGGDAKWSDRFLAYHLSIIYYWLLVVMYIVSPRLSYNFSELLEKHAVDTYEQFLTENEH 292

Query: 161 GSFENAPAPAIAIDYW---------------------RLPPDSTLRDVVVVIRADE 195
              +  PAPAIA+ Y+                       PP  TL D  + IR DE
Sbjct: 293 -RLKALPAPAIAVRYYANEVAYTFQAFGDENGSAVETSRPPVQTLYDAFLNIRLDE 347


>gi|90399151|emb|CAJ86080.1| H0818H01.2 [Oryza sativa Indica Group]
 gi|90399243|emb|CAJ86199.1| B0811B10.18 [Oryza sativa Indica Group]
          Length = 320

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 13/163 (7%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     +IK    E+ NE  HL+  
Sbjct: 109 LYRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWNEFHHLLIM 168

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLK 156
            EL     W +R   F  +   F  YF+    Y+ SP++A+     +E  A ++Y +F+K
Sbjct: 169 EELGGNSLWVDR---FLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIK 225

Query: 157 DLENGSFENAPAPAIAIDYWRLPPD----STLRDVVVVIRADE 195
            L     +  PAP  A++Y+ L  D      L DV V IR DE
Sbjct: 226 -LHEDELKKLPAPEAALNYY-LNEDLYLFDNLYDVFVNIRDDE 266


>gi|17229588|ref|NP_486136.1| plastoquinol terminal oxidase [Nostoc sp. PCC 7120]
 gi|17131187|dbj|BAB73795.1| oxidase [Nostoc sp. PCC 7120]
          Length = 230

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 71/185 (38%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH      +     W+K    E+
Sbjct: 6   VGILVFVINTVYRDRPYPRFYVLETVARVPYFSYLSVLHLYETLGWWRKADWLKVHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L     W +R L      +++      Y  SP  A+  +  +E+ A +
Sbjct: 66  WNELHHLLIMESLGGAGFWGDRFLAKTAALIYYWIIIAVYFVSPHSAYNFMEQVEQHAYS 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL   E    +  PAP +A  Y+                   R P    L DV V 
Sbjct: 126 SYDKFLTTHE-AELKTQPAPEVAKTYYRDGDLYMFDEFQTAHSPSERRPNIDNLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|359496713|ref|XP_002271078.2| PREDICTED: alternative oxidase 4, chloroplastic/chromoplastic-like,
           partial [Vitis vinifera]
          Length = 281

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           +  R      +LET+  VP      +LH      +     ++K    E+ NE  HL+   
Sbjct: 123 YHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME 182

Query: 102 ELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
           EL     W++R L   +   ++      Y+ SP++A+ +   +E  A  +Y +F+K  + 
Sbjct: 183 ELGGNAWWFDRFLAQHIAIFYYFMTVFMYVLSPRMAYHLSECVESHAYETYDKFIKS-QG 241

Query: 161 GSFENAPAPAIAIDYW 176
              +N PAP IA+ Y+
Sbjct: 242 DELKNLPAPEIAVRYY 257


>gi|255554747|ref|XP_002518411.1| Alternative oxidase 4, chloroplast precursor, putative [Ricinus
           communis]
 gi|223542256|gb|EEF43798.1| Alternative oxidase 4, chloroplast precursor, putative [Ricinus
           communis]
          Length = 356

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
           F+  R      +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 120 FYHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 179

Query: 101 IELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL     W++R L   +  +++      Y  SP++A+     +E  A  +Y +F+K  +
Sbjct: 180 EELGGNSWWFDRFLAQHIAIIYYIMTVFMYALSPRMAYHFSECVESHAYATYDKFIK-AQ 238

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A+ Y+                   R P    L DV + IR DE
Sbjct: 239 GEELKKLPAPEVAVKYYTEGDLYLFDEFQTSRAPHSRRPKIDNLYDVFLNIRDDE 293


>gi|384501421|gb|EIE91912.1| hypothetical protein RO3G_16623 [Rhizopus delemar RA 99-880]
          Length = 134

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 33/58 (56%)

Query: 9   LSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGM 66
           L I    HHKP    DK AY+TV+ L+     +F+  H   A +LET+ AVPGM  G+
Sbjct: 70  LDIGPNNHHKPTTLGDKAAYYTVKTLRILPDTYFRGNHYMRAAMLETIAAVPGMDVGV 127


>gi|224116034|ref|XP_002317190.1| predicted protein [Populus trichocarpa]
 gi|222860255|gb|EEE97802.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 21/175 (12%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            +  R      +LET+  VP      +LH      +     ++K    E+ NE  HL+  
Sbjct: 125 LYHDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIM 184

Query: 101 IELARPQW-YERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLE 159
            EL    W ++R L   +   ++    L Y  SP++A+     +E  A  +Y +F+K  +
Sbjct: 185 EELGGNSWWFDRLLAQVIATSYYFMTVLMYALSPRMAYHFSECVESHAFATYDKFIK-AQ 243

Query: 160 NGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
               +  PAP +A+ Y+                   R P    L DV + +R DE
Sbjct: 244 GDDLKKLPAPEVAVKYYTEGDLYLFDEFQTSRAPHSRRPKIENLYDVFLNVRDDE 298


>gi|297745709|emb|CBI41031.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           +  R      +LET+  VP      +LH      +     ++K    E+ NE  HL+   
Sbjct: 123 YHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME 182

Query: 102 ELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
           EL     W++R L   +   ++      Y+ SP++A+ +   +E  A  +Y +F+K  + 
Sbjct: 183 ELGGNAWWFDRFLAQHIAIFYYFMTVFMYVLSPRMAYHLSECVESHAYETYDKFIKS-QG 241

Query: 161 GSFENAPAPAIAIDYW 176
              +N PAP IA+ Y+
Sbjct: 242 DELKNLPAPEIAVRYY 257


>gi|115461198|ref|NP_001054199.1| Os04g0668900 [Oryza sativa Japonica Group]
 gi|21105122|gb|AAC35554.3| oxidase [Oryza sativa Japonica Group]
 gi|32488386|emb|CAE02811.1| OSJNBa0043A12.16 [Oryza sativa Japonica Group]
 gi|113565770|dbj|BAF16113.1| Os04g0668900 [Oryza sativa Japonica Group]
 gi|215695465|dbj|BAG90652.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195789|gb|EEC78216.1| hypothetical protein OsI_17850 [Oryza sativa Indica Group]
 gi|222629739|gb|EEE61871.1| hypothetical protein OsJ_16557 [Oryza sativa Japonica Group]
          Length = 336

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 27/178 (15%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     +IK    E+ NE  HL+  
Sbjct: 109 LYRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWNEFHHLLIM 168

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLK 156
            EL     W +R   F  +   F  YF+    Y+ SP++A+     +E  A ++Y +F+K
Sbjct: 169 EELGGNSLWVDR---FLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIK 225

Query: 157 DLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
            L     +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 226 -LHEDELKKLPAPEAALNYYLNEDLYLFDEFQTARVPCSRRPKIDNLYDVFVNIRDDE 282


>gi|224009886|ref|XP_002293901.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970573|gb|EED88910.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 292

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 31/196 (15%)

Query: 24  DKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGW- 82
           ++FA   ++   F T    + R       LET+  VP      +LH      +E  G W 
Sbjct: 74  NRFAIGFLKGTIFDTFFVGEDRAYARFYALETIARVPYFSYLSVLHL-----YETLGKWR 128

Query: 83  ----IKALLEEAENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAH 137
               +K    E+ NE  HL+   EL   + +++R L       +F      YL +P  A+
Sbjct: 129 RVKYLKLHFAESWNEMHHLLIMEELGGSERFFDRFLAQHCAFGYFLIVITLYLINPVQAY 188

Query: 138 RIVGYLEEEAVNSYTEFLKDLENGS-FENAPAPAIAIDYW-----------------RLP 179
            +   +EE A  +Y  FLK  EN    +  PAP +AI+Y+                 R P
Sbjct: 189 NLNQDVEEHAFATYDTFLK--ENAEMLKTKPAPKVAIEYYRHGDMYMFDEFQTECELRRP 246

Query: 180 PDSTLRDVVVVIRADE 195
             + L DV V IR DE
Sbjct: 247 EINNLYDVFVAIRDDE 262


>gi|359359155|gb|AEV41060.1| putative immutans protein [Oryza minuta]
          Length = 346

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 27/178 (15%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     +IK    E+ NE  HL+  
Sbjct: 119 LYRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWNEFHHLLIM 178

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLK 156
            EL     W +R   F  +   F  YF+    Y+ SP++A+     +E  A ++Y +F+K
Sbjct: 179 EELGGNSLWVDR---FLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIK 235

Query: 157 DLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
            L     +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 236 -LHEEDLKKLPAPEAALNYYLNEDLYLFDEFQTARVPCSRRPKIDNLYDVFVNIRDDE 292


>gi|359359202|gb|AEV41106.1| putative immutans protein [Oryza officinalis]
          Length = 347

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 27/178 (15%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     +IK    E+ NE  HL+  
Sbjct: 120 LYRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWNEFHHLLIM 179

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLK 156
            EL     W +R   F  +   F  YF+    Y+ SP++A+     +E  A ++Y +F+K
Sbjct: 180 EELGGNSLWVDR---FLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIK 236

Query: 157 DLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
            L     +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 237 -LHEEDLKKLPAPEAALNYYLNDDLYLFDEFQTARVPCSRRPKIDNLYDVFVNIRDDE 293


>gi|427728396|ref|YP_007074633.1| Alternative oxidase [Nostoc sp. PCC 7524]
 gi|427364315|gb|AFY47036.1| Alternative oxidase [Nostoc sp. PCC 7524]
          Length = 228

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 70/185 (37%), Gaps = 21/185 (11%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V  L F  +  ++ R      +LETV  VP      +LH            W+K    E+
Sbjct: 6   VGILVFVINTIYRDRPYPRFYVLETVARVPYFSYLSVLHLYETLGLWRKADWLKVHFAES 65

Query: 91  ENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L     W +R L      +++      Y+ +P  A+  +  +E  A N
Sbjct: 66  WNELHHLLIMENLGGAGFWGDRFLAKTTALIYYWIITALYIINPGAAYNFMELVENHAYN 125

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           SY +FL   E    +  PAP +A  Y+                   R P    L DV V 
Sbjct: 126 SYDKFLTSHE-AELKAQPAPEVATLYYRDGDLYMFDEFQTAHNPTERRPQIENLYDVFVA 184

Query: 191 IRADE 195
           IR DE
Sbjct: 185 IRDDE 189


>gi|359359056|gb|AEV40963.1| putative immutans protein [Oryza punctata]
 gi|359359107|gb|AEV41013.1| putative immutans protein [Oryza minuta]
          Length = 338

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 27/178 (15%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            ++ R+     +LET+  VP      +LH      +     +IK    E+ NE  HL+  
Sbjct: 111 LYRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESWNEFHHLLIM 170

Query: 101 IELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLK 156
            EL     W +R   F  +   F  YF+    Y+ SP++A+     +E  A ++Y +F+K
Sbjct: 171 EELGGNSLWVDR---FLARFAAFFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIK 227

Query: 157 DLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
            L     +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 228 -LHEEELKKLPAPEAALNYYLNEDLYLFDEFQTARVPCSRRPKIDNLYDVFVNIRDDE 284


>gi|157782926|gb|ABV72391.1| plastid terminal oxidase [Haematococcus pluvialis]
          Length = 441

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 24/186 (12%)

Query: 33  ALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL-LEEAE 91
           AL +   + + +R +    +LETV  +P      +LH      F  +G  ++ +   E  
Sbjct: 222 ALCWVLDVVYDKRPIQKFWVLETVARIPYFAYISILHLYESLGFWRAGAELRKIHFAEEW 281

Query: 92  NERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           NE  HL     L   Q W++R L      +++      YL SPK+A+  +  +E  A ++
Sbjct: 282 NELHHLQIMESLGGDQAWFDRFLAEHAAVLYYWLLIAFYLVSPKVAYNFMQRVEHHAADT 341

Query: 151 YTEFLKDLENGSFENAPAPAIAIDYW---------------------RLPPDSTLRDVVV 189
           Y EFL+        + P P +A++Y+                     R P  +TL DV +
Sbjct: 342 YCEFLES-NRELLASIPPPVVALNYYRNQDLYLFDSFQTSSKASGVQRRPDCNTLLDVFI 400

Query: 190 VIRADE 195
            +R DE
Sbjct: 401 NVRDDE 406


>gi|108442448|gb|ABF85790.1| plastid terminal oxidase [Haematococcus pluvialis]
          Length = 441

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 24/186 (12%)

Query: 33  ALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL-LEEAE 91
           AL +   + + +R +    +LETV  +P      +LH      F  +G  ++ +   E  
Sbjct: 222 ALCWVLDVVYDKRPIQKFWVLETVARIPYFAYISILHLYESLGFWRAGAELRKIHFAEEW 281

Query: 92  NERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNS 150
           NE  HL     L   Q W++R L      +++      YL SPK+A+  +  +E  A ++
Sbjct: 282 NELHHLQIMESLGGDQAWFDRFLAEHAAVLYYWLLIAFYLVSPKVAYNFMQRVEHHAADT 341

Query: 151 YTEFLKDLENGSFENAPAPAIAIDYW---------------------RLPPDSTLRDVVV 189
           Y EFL+        + P P +A++Y+                     R P  +TL DV +
Sbjct: 342 YCEFLES-NRELLASIPPPVVALNYYRNQDLYLFDSFQTSSKASGVQRRPDCNTLLDVFI 400

Query: 190 VIRADE 195
            +R DE
Sbjct: 401 NVRDDE 406


>gi|224118168|ref|XP_002331574.1| predicted protein [Populus trichocarpa]
 gi|222873798|gb|EEF10929.1| predicted protein [Populus trichocarpa]
          Length = 362

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 21/164 (12%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-RPQWYE 110
           +LET+  VP      +LH      +     +IK    E+ NE  HL+   EL     W++
Sbjct: 138 VLETIARVPYFAFISVLHLYESFGWWRRSDYIKVHFAESWNEMHHLLIMEELGGNSLWFD 197

Query: 111 RALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPA 170
           R L   +   ++    L Y  SP++A+     +E  A  +Y +F+K  +       PAP 
Sbjct: 198 RFLAQHMAFFYYIMTVLMYALSPRMAYHFSECVENHAFETYDKFIK-AQGEDLRKMPAPE 256

Query: 171 IAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           +A+ Y+                   R P    L DV + IR DE
Sbjct: 257 VAVKYYTEGDLYLFDEFQTSRAPHSRRPKIENLYDVFLNIRDDE 300


>gi|226501174|ref|NP_001150780.1| immutans protein [Zea mays]
 gi|195641770|gb|ACG40353.1| immutans protein [Zea mays]
          Length = 343

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 27/174 (15%)

Query: 45  RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA 104
           R+      LET+  VP      +LH  +   +     +IK    ++ NE  HL+   EL 
Sbjct: 122 RYYARFFALETIARVPYFAFISVLHLYATFGWWRRADYIKVHFAQSWNEFHHLLIMEELG 181

Query: 105 RPQ-WYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
               W++    F  + + F  YF+    Y+ SP++A+     +E  A ++Y EFLK L  
Sbjct: 182 GDSLWFD---CFLARFMAFFYYFMTVAMYMLSPRMAYHFSECVERHAYSTYDEFLK-LHE 237

Query: 161 GSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
              +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 238 EELKRLPAPEAALNYYMNEDLYLFDEFQASRTPGSRRPKIDNLYDVFVNIREDE 291


>gi|254441495|ref|ZP_05054988.1| hypothetical protein OA307_910 [Octadecabacter antarcticus 307]
 gi|198251573|gb|EDY75888.1| hypothetical protein OA307_910 [Octadecabacter antarcticus 307]
          Length = 71

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 31/46 (67%)

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +  ++L+ ++ G  EN  AP IA  YW LP D+ LRDVV+VIR DE
Sbjct: 6   AVQQYLEKIDAGKVENVLAPEIAKKYWNLPDDARLRDVVIVIREDE 51


>gi|224031555|gb|ACN34853.1| unknown [Zea mays]
 gi|414584889|tpg|DAA35460.1| TPA: alternative oxidase [Zea mays]
          Length = 339

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 27/177 (15%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           +  R+      LET+  VP      +LH  +   +     +IK    ++ NE  HL+   
Sbjct: 115 YGDRYYARFFALETIARVPYFAFISVLHLYATFGWWRRADYIKVHFAQSWNEFHHLLIME 174

Query: 102 ELARPQ-WYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           EL     W++    F  + + F  YF+    Y+ SP++A+     +E  A ++Y EFLK 
Sbjct: 175 ELGGDSLWFD---CFLARFMAFFYYFMTVAMYMLSPRMAYHFSECVERHAYSTYDEFLK- 230

Query: 158 LENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           L     +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 231 LHEEELKRLPAPEAALNYYMNEDLYLFDEFQASRTPGSRRPKIDNLYDVFVNIREDE 287


>gi|378706340|gb|AFC35141.1| hypothetical protein OtV6_233 [Ostreococcus tauri virus RT-2011]
          Length = 201

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           ++ R      +LETV  VP      +LH            +++   E+  NE  HL+   
Sbjct: 33  YKDRDYARFYVLETVARVPYFSFVSVLHLYETLGLWRKADYLETHFEQTMNEYHHLLIME 92

Query: 102 ELARPQWY-ERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           +L   + + +R   F  Q   F  Y+L    YLASP++A+ +   +EE A ++Y EFLK 
Sbjct: 93  QLGGDERFIDR---FFAQHTAFAYYWLTCLIYLASPRMAYNLSEQIEEHAYHTYDEFLKK 149

Query: 158 LENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
                    P P +A +Y+     + L DV   +R DE
Sbjct: 150 HGENLLLERP-PIVAANYY--GDVNNLYDVFTRVRDDE 184


>gi|307109615|gb|EFN57853.1| hypothetical protein CHLNCDRAFT_143310 [Chlorella variabilis]
          Length = 289

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 17/177 (9%)

Query: 34  LKFPTHLFFQRRHMCHAMLLETVGAVPGMVG------GMLLHCKSLRKFEHSGGWIKALL 87
           L  P     +R      +   +VG V G+ G       +  H +S+   +   GW+    
Sbjct: 86  LGAPADRLTERSLGKRILCFTSVGTVSGLAGKPWGRGAVFNHVRSILFNKPDNGWVHTAA 145

Query: 88  EEAENERMHLMTFIEL----ARPQWYERA--LVFAVQGVFFNAYFLAYLASPKLAHRIVG 141
             AE  R H           A+P  + R   L+F  + V F      Y   P  A+    
Sbjct: 146 ANAECVRAHAGIVANTTWTPAQPPLWARLFHLMFQARVVMFLQILPVYFFLPSAAYAYDA 205

Query: 142 YLEEEAVNSYTEFLKDLENGSFE---NAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           +  EE V  Y++ +  + +G F+   +  AP + + Y+ LP  + LRD ++ +RADE
Sbjct: 206 FRAEEQV--YSQAISLIGSGRFKTWKSTRAPGLGVSYYALPEGAMLRDALLRMRADE 260


>gi|157782928|gb|ABV72392.1| plastid terminal oxidase [Haematococcus pluvialis]
          Length = 447

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 33/182 (18%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLE-------EAEN 92
           + F+ R +     LETV  +P       LH         S GW +A  E       E  N
Sbjct: 244 VLFENRPIQRFWFLETVARMPYFSYISCLH------LYESLGWWRAAAELRKIHFAEEWN 297

Query: 93  ERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSY 151
           E  HL     L   Q W++R + +    V++    L Y+ASP LA+     LE  AV++Y
Sbjct: 298 ELHHLQIMESLGGDQLWFDRFVGYHSAIVYYWVLVLLYVASPSLAYTFSELLEAHAVDTY 357

Query: 152 TEFLKDLENGSFENAPAPAIAIDYWRL------------------PPDSTLRDVVVVIRA 193
            EFL D      ++   P +A +Y+R                   PP   L DV   I+ 
Sbjct: 358 GEFL-DANEPLLKSLAPPLVAAEYYRSCDLYLFDEFQTSNVTPRNPPLENLYDVFCAIKE 416

Query: 194 DE 195
           DE
Sbjct: 417 DE 418


>gi|108442436|gb|ABF85789.1| plastid terminal oxidase [Haematococcus pluvialis]
          Length = 447

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 33/182 (18%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLE-------EAEN 92
           + F+ R +     LETV  +P       LH         S GW +A  E       E  N
Sbjct: 244 VLFENRPIQRFWFLETVARMPYFSYISCLH------LYESLGWWRAAAELRKLHFAEEWN 297

Query: 93  ERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSY 151
           E  HL     L   Q W++R + +    V++    L Y+ASP LA+     LE  AV++Y
Sbjct: 298 ELHHLQIMESLGGDQLWFDRFVGYHSAIVYYWVLVLLYVASPSLAYTFSELLEAHAVDTY 357

Query: 152 TEFLKDLENGSFENAPAPAIAIDYWRL------------------PPDSTLRDVVVVIRA 193
            EFL D      ++   P +A +Y+R                   PP   L DV   I+ 
Sbjct: 358 GEFL-DANEPLLKSLAPPLVAAEYYRSCDLYLFDEFQTSNVTPRNPPLENLYDVFCAIKE 416

Query: 194 DE 195
           DE
Sbjct: 417 DE 418


>gi|428161219|gb|ACA53387.2| plastid terminal oxidase [Daucus carota]
          Length = 365

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 25/176 (14%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           +  R      +LET+  VP      +LH      +     ++K    E+ NE  HL+   
Sbjct: 134 YHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME 193

Query: 102 ELARPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDL 158
           EL    W+    +     VF+  YF+A   YL SP++A+     +E  A  +Y +F+ + 
Sbjct: 194 ELGGNAWWFDRFLSQHIAVFY--YFMAAFMYLLSPRMAYHFSECVEHHAFETYDKFI-NA 250

Query: 159 ENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           +    +  PA  +AI Y+                   R P    L DV V IR DE
Sbjct: 251 KGEDLKKLPASKVAIKYYTEGDMYLFDEFQTSRAPNTRRPVIDNLYDVFVNIRDDE 306


>gi|414584888|tpg|DAA35459.1| TPA: ethylene-responsive transcription factor 3 [Zea mays]
          Length = 547

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 45  RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA 104
           R+      LET+  VP      +LH  +   +     +IK    ++ NE  HL+   EL 
Sbjct: 355 RYYARFFALETIARVPYFAFISVLHLYATFGWWRRADYIKVHFAQSWNEFHHLLIMEELG 414

Query: 105 RPQ-WYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDLEN 160
               W++    F  + + F  YF+    Y+ SP++A+     +E  A ++Y EFLK L  
Sbjct: 415 GDSLWFD---CFLARFMAFFYYFMTVAMYMLSPRMAYHFSECVERHAYSTYDEFLK-LHE 470

Query: 161 GSFENAPAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
             F+ +  P       R P    L DV V IR DE
Sbjct: 471 DEFQASRTPGS-----RRPKIDNLYDVFVNIREDE 500


>gi|357166646|ref|XP_003580780.1| PREDICTED: alternative oxidase 4, chloroplastic/chromoplastic-like
           [Brachypodium distachyon]
          Length = 368

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 25/177 (14%)

Query: 41  FFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTF 100
            +  R+     +LET+  VP      +LH      +     +IK    E+ NE  HL+  
Sbjct: 140 LYGDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYIKVHFAESMNEFHHLLIM 199

Query: 101 IELARPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
            EL          +      F+  YF+    Y+ SP++A+     +E  A ++Y +FLK 
Sbjct: 200 EELGGNSELVDRFLARFSAFFY--YFMTVAMYMLSPRMAYHFSECVERHAYSTYDKFLK- 256

Query: 158 LENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           L     +  PAP  AI+Y+                   R P    L DV V IR DE
Sbjct: 257 LNGEELKKLPAPEAAINYYMNEDLYLFDEFQTSRVPCSRRPKVDNLYDVFVNIRDDE 313


>gi|242077584|ref|XP_002448728.1| hypothetical protein SORBIDRAFT_06g032180 [Sorghum bicolor]
 gi|241939911|gb|EES13056.1| hypothetical protein SORBIDRAFT_06g032180 [Sorghum bicolor]
          Length = 351

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 27/177 (15%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           ++ R+     +LET+  VP      +LH      +     +IK    ++ NE  HL+   
Sbjct: 125 YRDRNYARFFVLETIARVPYFGFISVLHLYETFGWWRRADYIKVHFAQSWNEFHHLLIME 184

Query: 102 ELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           EL     W +R   F  + + F  YF+    Y+ SP++A+     +E  A ++Y +FLK 
Sbjct: 185 ELGGNALWIDR---FLARFMAFFYYFMTVAMYMLSPRMAYHFSECVERHAYSTYDKFLK- 240

Query: 158 LENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           L     +  PAP  A++Y+                   R P    L DV V +R DE
Sbjct: 241 LHEEELKRLPAPEAALNYYLNEDLYLFDEFQTAGVPCSRRPKIDNLYDVFVNVRDDE 297


>gi|428184645|gb|EKX53500.1| plastid terminal oxidase [Guillardia theta CCMP2712]
          Length = 301

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-----RP 106
           +LETV  VP      +LH      +     WIK    EA+NE  HL+    L        
Sbjct: 122 VLETVARVPYFAYMSVLHLYESFGYHDRAHWIKIHYAEADNELHHLLIMEALGGNKEFSD 181

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENA 166
           +W  +   FA        YFL     P+ A+ ++  +E  A ++Y++++ +       + 
Sbjct: 182 RWIAQHAAFAYYWFCVTFYFL----HPRGAYYVMSLIENHAYHTYSKYI-EANKSWLASQ 236

Query: 167 PAPAIAIDYWRLPPDSTLRDVVVVIRADE 195
           P+PAIA +Y+    D  L D     RA+E
Sbjct: 237 PSPAIAKEYYE-GGDLYLFDAFHTTRAEE 264


>gi|428319159|ref|YP_007117041.1| alternative oxidase [Oscillatoria nigro-viridis PCC 7112]
 gi|428242839|gb|AFZ08625.1| alternative oxidase [Oscillatoria nigro-viridis PCC 7112]
          Length = 229

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WYE 110
           +LET+  VP      +LH      +      +K    E  NE  HL+    L   + W +
Sbjct: 30  MLETIARVPYFSYLSVLHLYETLGYWRKADLLKLHFAETWNELHHLLIMESLGGDRLWID 89

Query: 111 RALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAP 167
           R   F  Q V F  Y++    Y+  P  A+ ++  +E  A ++Y E+LK  E    +  P
Sbjct: 90  R---FIAQHVAFAYYWVVVPLYMLFPSYAYYLMELIEGHAYHTYDEYLKTYE-AQLKAQP 145

Query: 168 APAIAIDYWR 177
           AP +AI+++R
Sbjct: 146 APQVAINFYR 155


>gi|302760829|ref|XP_002963837.1| hypothetical protein SELMODRAFT_405292 [Selaginella moellendorffii]
 gi|300169105|gb|EFJ35708.1| hypothetical protein SELMODRAFT_405292 [Selaginella moellendorffii]
          Length = 290

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 29/37 (78%), Gaps = 5/37 (13%)

Query: 66  MLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIE 102
           MLLHC+SLR+FE SGG      EEAE+ER+++MT ++
Sbjct: 211 MLLHCRSLRRFEQSGG-----AEEAESERVYVMTVVQ 242


>gi|308809309|ref|XP_003081964.1| unnamed protein product [Ostreococcus tauri]
          Length = 260

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 20/162 (12%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WYER 111
           LETV  VP      +LH      +     ++K    E  NE  HL+    L   + W +R
Sbjct: 21  LETVARVPYFSFMSVLHLYETFGWWRRADYLKVHFAETMNEYHHLLIMESLGGAELWRDR 80

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAI 171
                V   ++      YL SP+ A+ ++  +E  A  +Y +FL+  E    +  PAP +
Sbjct: 81  FFAQHVAVAYYWICVAQYLVSPRWAYNLLEQVESHAYATYDKFLEANEE-VLKKTPAPRV 139

Query: 172 AIDYW------------------RLPPDSTLRDVVVVIRADE 195
           A+ Y+                  R P    L DV V +R DE
Sbjct: 140 AVAYYTKGDLYLFDEFQTGEKGARRPKIDNLYDVFVNVRNDE 181


>gi|116060431|emb|CAL55767.1| unnamed protein product, partial [Ostreococcus tauri]
          Length = 267

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 20/162 (12%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WYER 111
           LETV  VP      +LH      +     ++K    E  NE  HL+    L   + W +R
Sbjct: 28  LETVARVPYFSFMSVLHLYETFGWWRRADYLKVHFAETMNEYHHLLIMESLGGAELWRDR 87

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAI 171
                V   ++      YL SP+ A+ ++  +E  A  +Y +FL+  E    +  PAP +
Sbjct: 88  FFAQHVAVAYYWICVAQYLVSPRWAYNLLEQVESHAYATYDKFLEANEE-VLKKTPAPRV 146

Query: 172 AIDYW------------------RLPPDSTLRDVVVVIRADE 195
           A+ Y+                  R P    L DV V +R DE
Sbjct: 147 AVAYYTKGDLYLFDEFQTGEKGARRPKIDNLYDVFVNVRNDE 188


>gi|238013864|gb|ACR37967.1| unknown [Zea mays]
 gi|414584890|tpg|DAA35461.1| TPA: alternative oxidase [Zea mays]
          Length = 341

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 27/177 (15%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFI 101
           ++ R+     +LET+  VP      +LH      +     ++K    ++ NE  HL+   
Sbjct: 117 YRDRNYARFFVLETIARVPYFAFISVLHMYETFGWWRRADYLKVHFAQSLNEFHHLLIME 176

Query: 102 ELA-RPQWYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKD 157
           EL     W +    F  + + F  YF+    Y+ SP++A+     +E  A ++Y +FLK 
Sbjct: 177 ELGGNAIWID---CFLARFMAFFYYFMTVAMYMLSPRMAYHFSECVERHAYSTYDKFLK- 232

Query: 158 LENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
           L     +  PAP  A++Y+                   R P    L DV V IR DE
Sbjct: 233 LHEEELKTLPAPEAALNYYLNEDLYLFDEFQTTRIPCSRRPKIDNLYDVFVNIRDDE 289


>gi|302819116|ref|XP_002991229.1| hypothetical protein SELMODRAFT_429569 [Selaginella moellendorffii]
 gi|300140940|gb|EFJ07657.1| hypothetical protein SELMODRAFT_429569 [Selaginella moellendorffii]
          Length = 232

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 28/38 (73%)

Query: 6   KADLSINVTKHHKPENYRDKFAYWTVQALKFPTHLFFQ 43
           +A++SI++ KH  PEN+ D+FA   V AL+FPT L F+
Sbjct: 188 EAEVSIDINKHRNPENFSDQFARLAVMALRFPTDLLFR 225


>gi|149190030|ref|ZP_01868308.1| alternative oxidase [Vibrio shilonii AK1]
 gi|148836196|gb|EDL53155.1| alternative oxidase [Vibrio shilonii AK1]
          Length = 57

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 16 HHKPENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGG 65
          H K E   +K A    + LK+  +LF+ +++   A++LET+ AVPGMV G
Sbjct: 8  HKKAERVSEKVALSVTKLLKYVLNLFYGKKYDKRAVILETIAAVPGMVAG 57


>gi|219129931|ref|XP_002185130.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403309|gb|EEC43262.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 531

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 52  LLETVGAVPGMVGGMLLHC-KSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WY 109
           LLETV  +P      +LH  ++L  +  S G  +    E  NE  HL+    L   Q W+
Sbjct: 232 LLETVARMPYFSYITMLHLYETLGFWRRSAGMKRIHFAEELNEFHHLLIMESLGGDQAWW 291

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAP 169
            R L      V++ A  L +  SP L++R    LE  AV++Y +FL + E  + +  P P
Sbjct: 292 VRFLAQHSAIVYYVALCLLWGISPSLSYRFSELLETHAVSTYGQFLDENEE-ALKKLPPP 350

Query: 170 AIAIDYW 176
             AI+Y+
Sbjct: 351 LPAIEYY 357


>gi|302830420|ref|XP_002946776.1| hypothetical protein VOLCADRAFT_79367 [Volvox carteri f.
           nagariensis]
 gi|300267820|gb|EFJ52002.1| hypothetical protein VOLCADRAFT_79367 [Volvox carteri f.
           nagariensis]
          Length = 437

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL-LEEAENERMHLMTFIELARPQ-WY 109
           +LETV  +P      +LH      F  +G  ++ +   E  NE  HL     L   + W 
Sbjct: 218 VLETVARIPYFAYISILHLYESLGFWRAGAELRKIHFAEEWNEMHHLQIMESLGGDRAWM 277

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAP 169
           +R +       ++    L YL SP++A+  +  +E  A ++YT FL+       E+ P P
Sbjct: 278 DRFIAEHSAVFYYWVLILFYLVSPRMAYNFMQRVELHAADTYTAFLQR-NAAVLESIPPP 336

Query: 170 AIAIDYW--------------------RLPPDSTLRDVVVVIRADE 195
            +A+ Y+                    R P   TL DV   IR DE
Sbjct: 337 MVALQYYYSEDLYLFDEFQTASRGAPPRRPRCETLLDVFKNIRDDE 382


>gi|146104475|ref|XP_001469836.1| putative alternative oxidase [Leishmania infantum JPCM5]
 gi|398024826|ref|XP_003865574.1| alternative oxidase, putative [Leishmania donovani]
 gi|134074206|emb|CAM72948.1| putative alternative oxidase [Leishmania infantum JPCM5]
 gi|322503811|emb|CBZ38897.1| alternative oxidase, putative [Leishmania donovani]
          Length = 486

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%)

Query: 83  IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGY 142
           ++ LL + E+  +H      +A     ER LV  +Q V F  Y   +L  P++  R++ Y
Sbjct: 239 LRGLLAQCESHAVHYQVLSCMAEITLLERGLVLLLQAVHFTIYLALFLLYPRMGFRLMAY 298

Query: 143 LEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
             EE+   +T+ + D++ G       P +A+ YW L
Sbjct: 299 TAEESSVVWTQMVNDVDLGKIAEPRVPQLALHYWGL 334


>gi|145351913|ref|XP_001420304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580538|gb|ABO98597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 245

 Score = 45.1 bits (105), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 20/162 (12%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WYER 111
           LETV  VP      +LH      +     ++K    E  NE  HL+    L   + W +R
Sbjct: 32  LETVARVPYFSFMSVLHLYETFGWWRKADYLKVHFAETMNEYHHLLIMESLGGAELWKDR 91

Query: 112 ALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAI 171
            +   +   ++      YL SP+ A+ ++  +E  A  +Y  FL   E    +  P P++
Sbjct: 92  FVAQHIAVAYYWICVAQYLVSPRWAYNLLEQVESHAYATYDGFLNANEE-VLKATPPPSV 150

Query: 172 AIDYW------------------RLPPDSTLRDVVVVIRADE 195
           A+ Y+                  R P    L DV V +R DE
Sbjct: 151 AVQYYTKGDLYLFDEFQTVDRGERRPKIDNLYDVFVNVRNDE 192


>gi|298710389|emb|CBJ25453.1| alternative oxidase, mitochondrial protein [Ectocarpus siliculosus]
          Length = 651

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 22/185 (11%)

Query: 32  QALKFPTHLFFQRRHMCHAMLLETVGAVPGMVG-GMLLHCKSLRKFEHSGGWIKALLEEA 90
           +AL +   + F+ R +     LETV  +P      ML   ++L  +  +    K    E 
Sbjct: 321 KALCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLYETLGWWSGAAEVRKVHFAEE 380

Query: 91  ENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL     L    +W +R L      ++F+   L YL SP LA+     +E  AV+
Sbjct: 381 YNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFSVLILGYLVSPFLAYNFSELIESHAVD 440

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVVV 190
           +YTEF +  E       P P  A+DY+                   R P    L DV   
Sbjct: 441 TYTEFAEANEELLKSLPPTPQ-ALDYYHGGDMYLFDEFQTSRPAFSRRPRIQNLYDVFSC 499

Query: 191 IRADE 195
           IR DE
Sbjct: 500 IRDDE 504


>gi|303284211|ref|XP_003061396.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456726|gb|EEH54026.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 222

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 35/173 (20%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-----RPQ 107
           LETV  VP      +LH      F     ++K    +  NE  HL+    L      R +
Sbjct: 35  LETVARVPYFSFLSVLHLYETLGFWRRADYLKVHFAQTMNEFHHLLIMESLGGDDKFRDR 94

Query: 108 WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAP 167
           ++ + +     G+      L YL SP++A+ +   +EE A ++Y  FL++ E      +P
Sbjct: 95  FFAQHMAVGYYGI----ACLMYLVSPRMAYNLSEQVEEHAYHTYDVFLRENEERLKRQSP 150

Query: 168 APAIAIDYW-------------------------RLPPDSTLRDVVVVIRADE 195
            P IA+ Y+                         R P   +L DV V +R DE
Sbjct: 151 -PPIAVHYYQEGDLFLFDEFQTGAVTGVARGADKRRPRIDSLYDVFVNVRNDE 202


>gi|401420614|ref|XP_003874796.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322491032|emb|CBZ26296.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 484

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%)

Query: 83  IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGY 142
           ++ LL + E+  +H      +A     ER LV  +Q V F  Y   +L  P++  R++ Y
Sbjct: 237 LRGLLAQCESHAVHYQVLSCMAEITLLERGLVLLLQAVHFTIYLALFLFYPRMGFRLMAY 296

Query: 143 LEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
             EE+   +T+ + D++ G       P +A+ YW L
Sbjct: 297 TAEESSVVWTQMVNDVDLGKIAEPRVPQLALHYWGL 332


>gi|302837648|ref|XP_002950383.1| hypothetical protein VOLCADRAFT_90709 [Volvox carteri f.
           nagariensis]
 gi|300264388|gb|EFJ48584.1| hypothetical protein VOLCADRAFT_90709 [Volvox carteri f.
           nagariensis]
          Length = 468

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 70/184 (38%), Gaps = 35/184 (19%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLE-------EAEN 92
           + F  R +     LETV  +P      +LH         S GW +A  E       E  N
Sbjct: 261 VLFNNRPIQRFWFLETVARMPYFSYISVLH------LYESFGWWRAGAELRKIHFAEEWN 314

Query: 93  ERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSY 151
           E  HL     L   + W++R        V++      Y+ SP+LA+     +E  AV++Y
Sbjct: 315 ELHHLQIMESLGGDKLWFDRFCALHAAVVYYWILLALYVFSPELAYNFSELIEAHAVDTY 374

Query: 152 TEFLKDLENGSFENAPAPAIAIDYW--------------------RLPPDSTLRDVVVVI 191
            EF+ D      ++ P P +A  Y+                    R PP   L DV   I
Sbjct: 375 GEFV-DANEELLKSLPPPLVAAMYYRSQDLYMFDSFQTSQPLKNPRRPPCKNLHDVFCNI 433

Query: 192 RADE 195
           R DE
Sbjct: 434 RDDE 437


>gi|412987963|emb|CCO19359.1| predicted protein [Bathycoccus prasinos]
          Length = 393

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 2/149 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           V +  F     ++ R       LET+  VP      +LH      +     ++K    E 
Sbjct: 82  VDSAVFVIDKLYEGRDYPRFYALETIARVPYFSFLSVLHLYESFGWWRRADYLKVHFAET 141

Query: 91  ENERMHLMTFIELARPQWY-ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    +     + +R     V  V+F    L Y+ SP++A+ +   +EE A  
Sbjct: 142 MNEYHHLLIMEAMGGADSFKDRFFAQHVAVVYFWVAVLIYMVSPRMAYNLSEQVEEHAYA 201

Query: 150 SYTEFLKDLENGSFENAPAPAIAIDYWRL 178
           +Y +FLK  E    +  PA  +A+ Y++L
Sbjct: 202 TYDDFLKRKEE-ELKQTPACGVAVSYFQL 229


>gi|452821392|gb|EME28423.1| plastid terminal oxidase [Galdieria sulphuraria]
          Length = 378

 Score = 44.3 bits (103), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 4/183 (2%)

Query: 15  KHHKPENY--RDKFAYWTVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKS 72
           +  K E+Y    +++ W   AL       ++ R +     LETV  +P      +LH   
Sbjct: 162 RESKQESYITTPRWSRWIYDALCGFIDWAYKDRPVERFWFLETVARMPYFSYISVLHLYE 221

Query: 73  LRKFEHSGGWIKALLEEAENERMHLMTFIELARP-QWYERALVFAVQGVFFNAYFLAYLA 131
              +  +G  +K    E  NE  HL+    L    +W +R +       ++    L +  
Sbjct: 222 TLGWWRNGELLKIHFAEEYNEFHHLLIMESLGGDRKWLDRFVAEHAAVFYYWILVLYFFL 281

Query: 132 SPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVI 191
           SP LA+     +E  AV++YTEFL+  E    +  P P IA  Y+         ++++ +
Sbjct: 282 SPSLAYNFSELVEAHAVDTYTEFLQTNEE-LLKQLPPPKIAERYYLADNLYMFDEIILQV 340

Query: 192 RAD 194
             D
Sbjct: 341 LGD 343


>gi|157877409|ref|XP_001687022.1| putative alternative oxidase [Leishmania major strain Friedlin]
 gi|68130097|emb|CAJ09405.1| putative alternative oxidase [Leishmania major strain Friedlin]
          Length = 493

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%)

Query: 83  IKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGY 142
           ++ LL + E+  +H      +A     ER+LV  +Q V F  Y   +L  P++  R++ Y
Sbjct: 246 LRGLLAQCESHAVHYQVLSCMAEITLLERSLVLLLQAVHFTIYLALFLFYPRMGFRLMAY 305

Query: 143 LEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRL 178
             EE+   +T+ + D++ G       P +A+ YW L
Sbjct: 306 AAEESSVVWTQMVNDVDLGKIAEPRVPQLALHYWGL 341


>gi|159491010|ref|XP_001703466.1| plastid terminal oxidase [Chlamydomonas reinhardtii]
 gi|158280390|gb|EDP06148.1| plastid terminal oxidase [Chlamydomonas reinhardtii]
          Length = 416

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 28/170 (16%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL-LEEAENERMHLMTFIELARPQ-WY 109
           +LETV  +P      +LH      F  +G  ++ +   E  NE  HL     L   + W+
Sbjct: 219 VLETVARIPYFAYISILHLYESLGFWRAGAELRKIHFAEEWNEMHHLQIMESLGGDRAWF 278

Query: 110 ERALVFAVQGVFFNAYFLA-YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPA 168
           +R  +     VF+    +A YL SP++A+  +  +E  A ++Y+ F+ +    +  + P 
Sbjct: 279 DR-FIAEHAAVFYYWVLIAFYLVSPRMAYNFMQRVELHAADTYSAFV-ERNRTALADIPP 336

Query: 169 PAIAIDYW-----------------------RLPPDSTLRDVVVVIRADE 195
           P +A+ Y+                       R PP   L DV   IR DE
Sbjct: 337 PLVALQYYYSDDLYLFDEFQTASRGAPGVPPRRPPCENLLDVFTNIRDDE 386


>gi|240275759|gb|EER39272.1| alternative oxidase [Ajellomyces capsulatus H143]
          Length = 103

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 4/50 (8%)

Query: 150 SYTEFLKDLENG---SFENAPAPAIAIDYWRLPPDS-TLRDVVVVIRADE 195
           +YT  +KDLE+G   ++ N PAP IA+ YW++P    T+ D++  IRADE
Sbjct: 2   TYTHAIKDLESGKLPNWANQPAPDIAVAYWQMPEGKRTILDLLYYIRADE 51


>gi|323455003|gb|EGB10872.1| hypothetical protein AURANDRAFT_14460, partial [Aureococcus
           anophagefferens]
          Length = 199

 Score = 42.7 bits (99), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 5/165 (3%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGW--IKALLE 88
           V A K      ++ R      +LET+  VP      ++H +        G    ++    
Sbjct: 2   VGATKGAIDALYEGRDFARFYVLETLARVPYFAYLSVMHLRETFGDRRPGDSERMRTHYA 61

Query: 89  EAENERMHLMTFIELA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEA 147
           EA+NE  HL+    L       +R L  ++   +F    + Y  S   A+ +   +E+ A
Sbjct: 62  EADNELHHLLIMESLGGNSSAVDRTLAQSMAFFYFWYVTVVYSFSEPAAYHLSELIEDHA 121

Query: 148 VNSYTEFLKDLENGSFENAPAPAIAIDYWRLPPDSTLRDVVVVIR 192
            N+Y +F+KD      +  P P IA  Y+    D  LRD  + ++
Sbjct: 122 FNTYDDFIKD-HGPKLKGMPVPDIARKYYER-DDPYLRDQFLTVK 164


>gi|298709084|emb|CBJ31032.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 259

 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)

Query: 4   TYKADLSINVTKHHKP--------ENYRDKFAYWTVQALKFPTHLFFQRRHMCHAMLLET 55
           T  +D S  V    +P          + + F    V  LK     ++  R       LET
Sbjct: 55  TSASDSSATVVSPGRPRLPAERNVNAFMNDFNAGVVDFLKGLMVQYYGERTYARFYALET 114

Query: 56  VGAVPGMVGGMLLHC-KSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-----RPQWY 109
           +  VP      +LH  ++L K+  +  ++K    E+ NE  HL+   EL      R +W 
Sbjct: 115 IARVPYFGYLCVLHLYETLGKWRQAE-YLKVHFAESYNELHHLLIMEELGGNVLFRDRW- 172

Query: 110 ERALVFAVQGVFFNAYFLA----YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFEN 165
                FA    FF  YF      YL++P+ A+ +  ++EE A ++Y  FL D +  + + 
Sbjct: 173 -----FAQHAAFF--YFFVVVGLYLSNPRNAYNLNQHVEEHAFSTYDSFLSDNQE-ALKQ 224

Query: 166 APAPAIAI 173
            PAP  ++
Sbjct: 225 QPAPEASL 232


>gi|145354902|ref|XP_001421713.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581951|gb|ABP00007.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 240

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 22/165 (13%)

Query: 52  LLETVGAVPGMV-GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WY 109
            LETV  +P      ML   + L  +  S    K    E  NE  HL+    L     W 
Sbjct: 56  FLETVARMPYFSYTSMLTFYEILGWWRRSSELRKVHFAEEWNEYHHLLVMESLGGDACWR 115

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAP 169
           +R L      V++      +L SP LA+     +E  AV++Y +F+ D      ++ PAP
Sbjct: 116 DRFLGQHAAIVYYFVLVALWLISPALAYNFSELIEGHAVDTYGQFV-DQNAELLKSMPAP 174

Query: 170 AIAIDYW-------------------RLPPDSTLRDVVVVIRADE 195
            IA++Y+                   R P   +L DV   IR DE
Sbjct: 175 RIAVEYYEAADLYLFDEFQTAREVRLRRPQIRSLFDVFSNIRDDE 219


>gi|404325818|gb|AFR58666.1| plastid terminal oxidase [Dunaliella salina]
          Length = 451

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLE-------EAEN 92
           L +  R +     LETV  +P       +H         + GW +A  E       E  N
Sbjct: 247 LVYNNRPIQRFWFLETVARMPYFSYISCIH------LYETLGWWRAAAELRKIHFAEEWN 300

Query: 93  ERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSY 151
           E  HL     L   + W++R L +     ++      Y+ SPKLA+     LE  AV++Y
Sbjct: 301 ELHHLQIMEALGGDRLWFDRFLAYHSAIAYYWVLVGLYICSPKLAYNFSELLEAHAVDTY 360

Query: 152 TEFLKDLENGSFENAPAPAIAIDYWRLP 179
            EF+   E    ++   P +A  Y+R P
Sbjct: 361 GEFVSSNEE-LLKSLEPPLVAAQYYRSP 387


>gi|219124647|ref|XP_002182610.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405956|gb|EEC45897.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 314

 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)

Query: 53  LETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-RPQWYER 111
           LET+  +P      +LH            +++    E+ NE  HL+   EL    +W +R
Sbjct: 130 LETIARMPYFSYLSVLHLWETLGMWRRAEYLQVHFAESWNELHHLLIMEELGGNGRWGDR 189

Query: 112 ALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPA 168
              F  Q + F  Y++    Y  +P +A+ +   +EEEA  +Y  FL+       ++ PA
Sbjct: 190 ---FVAQHIAFFYYWIVVTLYAVNPTMAYNLNQAVEEEAYETYDGFLQT-HAEYLQSQPA 245

Query: 169 PAIAIDYW 176
           P  AI Y+
Sbjct: 246 PQAAIRYY 253


>gi|302782501|ref|XP_002973024.1| hypothetical protein SELMODRAFT_98486 [Selaginella moellendorffii]
 gi|300159625|gb|EFJ26245.1| hypothetical protein SELMODRAFT_98486 [Selaginella moellendorffii]
          Length = 255

 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 26/186 (13%)

Query: 33  ALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL-LEEAE 91
           AL +   + F+ R +     LETV  +P      +LH      +   G  ++ +   E  
Sbjct: 47  ALCWMLDVIFEGRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRVGADVRKVHFAEEW 106

Query: 92  NERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYL--ASPKLAHRIVGYLEEEAV 148
           NE  HL     L     W +R   F     FF  + L ++   SPK+A+     +E  AV
Sbjct: 107 NEMHHLKIMESLGGDLLWGDR--FFGQHAAFFYYWILNFMFFVSPKVAYNFSELIEMHAV 164

Query: 149 NSYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVV 189
           ++Y +F+ + E    +  P+P  A+ Y+                   R P   +L DV V
Sbjct: 165 DTYGQFVDENEELLKQLPPSPE-AVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFV 223

Query: 190 VIRADE 195
            I+ DE
Sbjct: 224 AIKGDE 229


>gi|302805482|ref|XP_002984492.1| hypothetical protein SELMODRAFT_120335 [Selaginella moellendorffii]
 gi|300147880|gb|EFJ14542.1| hypothetical protein SELMODRAFT_120335 [Selaginella moellendorffii]
          Length = 255

 Score = 39.3 bits (90), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 26/186 (13%)

Query: 33  ALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKAL-LEEAE 91
           AL +   + F+ R +     LETV  +P      +LH      +   G  ++ +   E  
Sbjct: 47  ALCWMLDVIFEGRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRVGADVRKVHFAEEW 106

Query: 92  NERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYL--ASPKLAHRIVGYLEEEAV 148
           NE  HL     L     W +R   F     FF  + L ++   SPK+A+     +E  AV
Sbjct: 107 NEMHHLKIMESLGGDLLWGDR--FFGQHAAFFYYWILNFMFFVSPKVAYNFSELIEMHAV 164

Query: 149 NSYTEFLKDLENGSFENAPAPAIAIDYW-------------------RLPPDSTLRDVVV 189
           ++Y +F  + E    +  P+P  A+ Y+                   R P   +L DV V
Sbjct: 165 DTYGQFFDENEELLKQLPPSPE-AVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFV 223

Query: 190 VIRADE 195
            I+ DE
Sbjct: 224 AIKGDE 229


>gi|238576406|ref|XP_002388025.1| hypothetical protein MPER_13010 [Moniliophthora perniciosa FA553]
 gi|215448966|gb|EEB88955.1| hypothetical protein MPER_13010 [Moniliophthora perniciosa FA553]
          Length = 57

 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 16/22 (72%), Positives = 18/22 (81%)

Query: 167 PAPAIAIDYWRLPPDSTLRDVV 188
           PAP IAIDYWRLP D+ L DV+
Sbjct: 1   PAPKIAIDYWRLPADAKLLDVI 22


>gi|159468876|ref|XP_001692600.1| alternative oxidase [Chlamydomonas reinhardtii]
 gi|158278313|gb|EDP04078.1| alternative oxidase [Chlamydomonas reinhardtii]
          Length = 471

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 21/147 (14%)

Query: 42  FQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLE-------EAENER 94
           ++ R +     LETV  +P      +LH         S GW +A  E       E  NE 
Sbjct: 266 YENRPIQRFWFLETVARMPYFSYISMLH------LYESLGWWRAGAELRKIHFAEEWNEL 319

Query: 95  MHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLA---YLASPKLAHRIVGYLEEEAVNS 150
            HL     L   Q W++R   FA Q      Y++    Y+ SP+LA+     +E  AV++
Sbjct: 320 HHLQIMESLGGDQLWFDR---FAAQHAAILYYWILLGLYVFSPRLAYNFSELIEYHAVDT 376

Query: 151 YTEFLKDLENGSFENAPAPAIAIDYWR 177
           Y EF+ D      ++ P P +A  Y+R
Sbjct: 377 YGEFV-DANEELLKSLPPPLVAAVYYR 402


>gi|412985307|emb|CCO20332.1| predicted protein [Bathycoccus prasinos]
          Length = 394

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 5/128 (3%)

Query: 52  LLETVGAVPGMV-GGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQ-WY 109
            LETV  +P      ML   + L  +  S    K    E  NE  HL+    L   + W 
Sbjct: 126 FLETVARMPYFSYTTMLTLYELLGWWRRSSELRKVHFAEEWNEYHHLLIMESLGGDRRWS 185

Query: 110 ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGS-FENAPA 168
           +R L      V++    + +L SPKLA+     +E  AV +Y +F +  EN    E+ PA
Sbjct: 186 DRFLAQHAALVYYFGLVVVWLLSPKLAYNFSEKIETHAVATYAQFTE--ENKELLESLPA 243

Query: 169 PAIAIDYW 176
           P +A  Y+
Sbjct: 244 PEVAKKYY 251


>gi|126661027|ref|ZP_01732112.1| cobaltochelatase [Cyanothece sp. CCY0110]
 gi|126617681|gb|EAZ88465.1| cobaltochelatase [Cyanothece sp. CCY0110]
          Length = 1327

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 11/85 (12%)

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
           F H    I+ ++ EA N R  L     +  PQ Y+ +L  AV+ +  N        +PKL
Sbjct: 2   FTHVKSTIRHIIPEATNGRSLLKVVYVVLEPQ-YQSSLSAAVKAINKN--------NPKL 52

Query: 136 AHRIVGYLEEEAVN--SYTEFLKDL 158
           A  I GYL EE  N  +Y EF +D+
Sbjct: 53  AIEISGYLIEELRNPENYEEFKRDV 77


>gi|218249027|ref|YP_002374398.1| magnesium chelatase subunit H [Cyanothece sp. PCC 8801]
 gi|257062114|ref|YP_003140002.1| magnesium chelatase subunit H [Cyanothece sp. PCC 8802]
 gi|218169505|gb|ACK68242.1| magnesium chelatase, H subunit [Cyanothece sp. PCC 8801]
 gi|256592280|gb|ACV03167.1| magnesium chelatase, H subunit [Cyanothece sp. PCC 8802]
          Length = 1330

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 11/90 (12%)

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
           F H    I+ ++ +A N R  L     +  PQ Y+ +L  AV  +  N        +PKL
Sbjct: 2   FTHVKSTIRHIVPKAINGRSLLKVVYVVLEPQ-YQSSLSAAVNAINSN--------NPKL 52

Query: 136 AHRIVGYLEEEAVN--SYTEFLKDLENGSF 163
           A  I GYL EE  N  +Y EF +D+ N + 
Sbjct: 53  AIEISGYLIEELRNPENYEEFKRDIANANL 82


>gi|358373662|dbj|GAA90259.1| NACHT and WD40 domain protein [Aspergillus kawachii IFO 4308]
          Length = 1459

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 1   PWETY-KADLSINVTKHHKPENYRDKFAYWT--------VQALKFPTHLFFQRRHMCHAM 51
           P+E + + D+S NV + + P        YWT        V ++   TH F Q   +  A 
Sbjct: 735 PYEGFERYDISANVIRDNIPPELEYSCRYWTLHLAHGNNVSSILEETHSFIQAHFLHWAE 794

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELARPQWYER 111
           ++  +G    +VG + +    LRK    G  I + L +A    +   +  ++A  Q Y  
Sbjct: 795 VMCVLGYASEIVGNIEM----LRKLTGEGSAISSFLYDALRFMLKCRSIADIAPLQLYCS 850

Query: 112 ALVFA-VQGVFFNAY 125
            L+FA  Q +   AY
Sbjct: 851 GLIFAPSQSIIRRAY 865


>gi|33860894|ref|NP_892455.1| plastoquinol terminal oxidase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633836|emb|CAE18795.1| conserved hypothetical [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 169

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 7/131 (5%)

Query: 30  TVQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCK-SL-RKFEHSGGWIKALL 87
           TV+ L F     +  RH+    +LE +   P      +LH K SL  K + +   +K   
Sbjct: 12  TVKILDFV----YSDRHLQRFWVLEVIARSPYFAFLSVLHFKESLGLKNDITMFLMKEHF 67

Query: 88  EEAENERMHLMTFIELARPQ-WYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEE 146
            +A NE  HL    +    + W +R L   +  V++      Y  SP+ A+ +   +EE 
Sbjct: 68  YQAINETEHLKEMEKRGGDKFWIDRFLARHLVLVYYWIMVFYYFCSPRNAYDVNIKIEEH 127

Query: 147 AVNSYTEFLKD 157
           A N+YT++LKD
Sbjct: 128 AFNTYTKYLKD 138


>gi|354552460|ref|ZP_08971768.1| magnesium chelatase, H subunit [Cyanothece sp. ATCC 51472]
 gi|353555782|gb|EHC25170.1| magnesium chelatase, H subunit [Cyanothece sp. ATCC 51472]
          Length = 1327

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 11/85 (12%)

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
           F H    I+ ++ EA N R  L     +  PQ Y+ +L  AV+ +  N        +PKL
Sbjct: 2   FTHVKSTIRHIVPEATNGRSLLKVVYVVLEPQ-YQSSLSAAVKAINKN--------NPKL 52

Query: 136 AHRIVGYLEEEAVN--SYTEFLKDL 158
           A  I GYL EE  N  +Y EF +D+
Sbjct: 53  AIEISGYLIEELRNPENYEEFKRDV 77


>gi|172039271|ref|YP_001805772.1| magnesium chelatase subunit H [Cyanothece sp. ATCC 51142]
 gi|171700725|gb|ACB53706.1| magnesium chelatase, subunit H [Cyanothece sp. ATCC 51142]
          Length = 1348

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 11/85 (12%)

Query: 76  FEHSGGWIKALLEEAENERMHLMTFIELARPQWYERALVFAVQGVFFNAYFLAYLASPKL 135
           F H    I+ ++ EA N R  L     +  PQ Y+ +L  AV+ +  N        +PKL
Sbjct: 23  FTHVKSTIRHIVPEATNGRSLLKVVYVVLEPQ-YQSSLSAAVKAINKN--------NPKL 73

Query: 136 AHRIVGYLEEEAVN--SYTEFLKDL 158
           A  I GYL EE  N  +Y EF +D+
Sbjct: 74  AIEISGYLIEELRNPENYEEFKRDV 98


>gi|118637020|emb|CAI77910.1| plastid terminal oxidase precursor [Guillardia theta]
          Length = 222

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 9/105 (8%)

Query: 52  LLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEAENERMHLMTFIELA-----RP 106
           +LETV  VP      +LH      +     WIK    EA+NE  HL+    L        
Sbjct: 122 VLETVARVPYFAYMSVLHLYESFGYHDRAHWIKIHYAEADNELHHLLIMEALGGNKEFSD 181

Query: 107 QWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSY 151
           +W  +   FA        YFL     P+ AH ++  +E  A ++Y
Sbjct: 182 RWIAQHAAFAYNWFCVTFYFL----HPRGAHNVMFLIENHAYHTY 222


>gi|14595199|gb|AAK70807.1| oxidase [Oryza sativa]
          Length = 158

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 23/96 (23%)

Query: 122 FNAYFLA---YLASPKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYW-- 176
           F  YF+    Y+ SP++A+     +E  A ++Y +F+K L     +  PAP  A++Y+  
Sbjct: 10  FFYYFMTVAMYMVSPRMAYHFSECVERHAYSTYDKFIK-LHEDELKKLPAPEAALNYYLN 68

Query: 177 -----------------RLPPDSTLRDVVVVIRADE 195
                            R P    L DV V IR DE
Sbjct: 69  EDLYLFDEFQTARVPCSRRPKIDNLYDVFVNIRDDE 104


>gi|83308257|emb|CAJ44430.1| alternative oxidase [Cocos nucifera]
          Length = 64

 Score = 37.7 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 21/29 (72%)

Query: 1  PWETYKADLSINVTKHHKPENYRDKFAYW 29
          PW++Y ++ SI++ KHH P  + +K AYW
Sbjct: 34 PWDSYTSNQSIDLHKHHVPMTWGEKLAYW 62


>gi|323456443|gb|EGB12310.1| hypothetical protein AURANDRAFT_20495 [Aureococcus anophagefferens]
          Length = 242

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 29/179 (16%)

Query: 45  RHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGW--IKALLEEAENERMHLMTFIE 102
           R      +LETV  VP      ++H +        G    ++    EA+NE  HL+    
Sbjct: 31  RDFARFYVLETVARVPYFAYLSVMHLRETFGDRDPGDSERMRTHYAEADNELHHLLIMES 90

Query: 103 LA-RPQWYERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVNSYTEFLKDLENG 161
           L       +R L   +   ++    + Y  S   A+ +   +E+ A N+Y  FL+D    
Sbjct: 91  LGGNSSAVDRTLAQTMAFFYYWYVTVVYSFSEPAAYHLSELIEDHAFNTYDGFLRD-HGP 149

Query: 162 SFENAPAPAIAIDYWR-------------------------LPPDSTLRDVVVVIRADE 195
             +  P P IA  Y+                           PP  +L DV V IR DE
Sbjct: 150 KLKGMPVPDIARKYYERDDPFLFDQFCTVKEPDGGEFTSRSRPPLESLYDVFVNIRNDE 208


>gi|404325822|gb|AFR58668.1| plastid terminal oxidase [Dunaliella bardawil]
          Length = 451

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 81  GWIKALLE-------EAENERMHLMTFIELARP-QWYERALVFAVQGVFFNAYFLAYLAS 132
           GW +A  E       E  NE  HL     L     W++R L +     ++      Y+ S
Sbjct: 282 GWWRAAAELRKIHFAEEWNELHHLQIMEALGGDCMWFDRFLAYHSAIAYYWVLVALYIFS 341

Query: 133 PKLAHRIVGYLEEEAVNSYTEFLKDLENGSFENAPAPAIAIDYWRLP 179
           P+L++     LE  AV++Y+EF+   E    ++   P +A  Y+R P
Sbjct: 342 PRLSYNFSELLEAHAVDTYSEFVSSNEV-LLKSLEPPLVAAQYYRSP 387


>gi|384251652|gb|EIE25129.1| hypothetical protein COCSUDRAFT_46597 [Coccomyxa subellipsoidea
           C-169]
          Length = 487

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 40  LFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLE-------EAEN 92
           + + +R +     LE V  +P      +LH         S GW +A  E       E  N
Sbjct: 248 VLYNKRPIQRFWFLEVVARMPYFSYISMLH------LYESLGWWRAGAELRRIHFAEEWN 301

Query: 93  ERMHLMTFIELARPQ-WYERALVFAVQ--GVFFNAYFLAYLA-SPKLAHRIVGYLEEEAV 148
           E  HL     L   Q W +R   FA Q   VF+    + + A SP+LA+     +E  AV
Sbjct: 302 ELHHLQIMESLGGDQFWIDR---FAAQHAAVFYYWVIVGFFAFSPQLAYVFSELVEGHAV 358

Query: 149 NSYTEFLKDLENGS-FENAPAPAIAIDYWR 177
           ++Y EF++  EN    +  P P +A++Y++
Sbjct: 359 DTYEEFVE--ENAELLKTLPPPVVALEYYK 386


>gi|298492297|ref|YP_003722474.1| alternative oxidase ['Nostoc azollae' 0708]
 gi|298234215|gb|ADI65351.1| alternative oxidase ['Nostoc azollae' 0708]
          Length = 164

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 2/141 (1%)

Query: 31  VQALKFPTHLFFQRRHMCHAMLLETVGAVPGMVGGMLLHCKSLRKFEHSGGWIKALLEEA 90
           +  L F  +  ++ R      +LETV  VP      + H      F      +K    E+
Sbjct: 6   LDILVFVINTIYRGRPYPRFYVLETVERVPYFSYLSISHLYGTLGFCRRADGLKVDFAES 65

Query: 91  ENERMHLMTFIELARPQWY-ERALVFAVQGVFFNAYFLAYLASPKLAHRIVGYLEEEAVN 149
            NE  HL+    L   Q   +R L      +++      Y+ SP  A+  +  +E  A N
Sbjct: 66  WNELHHLLMMESLEGSQLSGDRILARTTVLLYYWIIVALYIVSPGSAYHFMELVESHAYN 125

Query: 150 SYTEFLKDLENGSFENAPAPA 170
           SY +FL + E    +  P PA
Sbjct: 126 SYQKFLTEYET-ELKLEPTPA 145


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.137    0.435 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,144,913,270
Number of Sequences: 23463169
Number of extensions: 123165956
Number of successful extensions: 367154
Number of sequences better than 100.0: 699
Number of HSP's better than 100.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 366094
Number of HSP's gapped (non-prelim): 723
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 73 (32.7 bits)