Query 041196
Match_columns 91
No_of_seqs 120 out of 2994
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 04:43:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041196.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041196hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 7.4E-23 1.6E-27 107.9 5.9 82 2-87 65-148 (226)
2 KOG0512 Fetal globin-inducing 99.9 6.5E-22 1.4E-26 103.8 6.3 84 1-88 89-173 (228)
3 KOG0509 Ankyrin repeat and DHH 99.9 9.4E-22 2E-26 118.2 6.8 84 2-89 71-156 (600)
4 KOG4412 26S proteasome regulat 99.9 1.7E-21 3.7E-26 102.8 5.8 80 2-85 99-179 (226)
5 PHA02791 ankyrin-like protein; 99.8 1.6E-19 3.5E-24 102.7 9.0 82 3-89 24-105 (284)
6 PHA02743 Viral ankyrin protein 99.8 1.5E-19 3.3E-24 96.1 8.1 83 2-88 50-138 (166)
7 PHA02741 hypothetical protein; 99.8 3.3E-19 7.1E-24 95.1 9.0 84 2-89 53-143 (169)
8 PHA02878 ankyrin repeat protei 99.8 5E-19 1.1E-23 106.7 9.2 83 2-88 160-244 (477)
9 PHA02884 ankyrin repeat protei 99.8 8.1E-19 1.8E-23 100.3 9.1 79 6-88 67-147 (300)
10 KOG0509 Ankyrin repeat and DHH 99.8 3.7E-19 8.1E-24 107.3 7.6 85 2-90 104-190 (600)
11 PHA02874 ankyrin repeat protei 99.8 1.3E-18 2.9E-23 103.9 9.3 82 3-88 118-200 (434)
12 PHA02741 hypothetical protein; 99.8 1.2E-18 2.5E-23 93.0 7.8 88 1-89 13-109 (169)
13 PHA02875 ankyrin repeat protei 99.8 1.5E-18 3.3E-23 103.0 9.0 82 4-89 97-179 (413)
14 PHA02736 Viral ankyrin protein 99.8 3.9E-19 8.6E-24 93.5 4.4 82 4-89 50-137 (154)
15 PHA02946 ankyin-like protein; 99.8 4E-18 8.6E-23 102.2 8.9 82 2-86 65-149 (446)
16 KOG4177 Ankyrin [Cell wall/mem 99.8 1.6E-18 3.4E-23 110.9 7.6 85 2-90 533-618 (1143)
17 PHA02859 ankyrin repeat protei 99.8 6.3E-18 1.4E-22 92.8 8.9 80 3-86 117-200 (209)
18 PHA02874 ankyrin repeat protei 99.8 5.7E-18 1.2E-22 101.2 9.1 83 2-88 150-233 (434)
19 KOG0510 Ankyrin repeat protein 99.8 2.3E-18 5E-23 106.6 6.8 85 1-88 265-351 (929)
20 KOG0195 Integrin-linked kinase 99.8 1.9E-18 4.1E-23 97.4 5.8 85 2-90 27-112 (448)
21 PHA02859 ankyrin repeat protei 99.8 1.2E-17 2.7E-22 91.7 9.0 82 2-87 44-132 (209)
22 PHA03095 ankyrin-like protein; 99.8 7E-18 1.5E-22 101.4 8.7 84 2-89 215-301 (471)
23 PHA02791 ankyrin-like protein; 99.8 1.1E-17 2.4E-22 95.3 9.0 81 3-89 88-171 (284)
24 PLN03192 Voltage-dependent pot 99.8 1.2E-17 2.6E-22 106.0 9.1 84 2-89 551-666 (823)
25 KOG0502 Integral membrane anky 99.8 1.5E-18 3.2E-23 94.4 4.3 84 1-87 152-235 (296)
26 PHA03095 ankyrin-like protein; 99.7 1.5E-17 3.3E-22 99.9 8.9 81 2-86 40-125 (471)
27 PF12796 Ank_2: Ankyrin repeat 99.7 5.4E-17 1.2E-21 78.3 8.6 69 13-88 1-69 (89)
28 PHA03100 ankyrin repeat protei 99.7 3.3E-17 7.3E-22 98.7 8.6 82 3-88 100-186 (480)
29 PHA02878 ankyrin repeat protei 99.7 5.5E-17 1.2E-21 98.0 9.0 79 3-85 195-276 (477)
30 PHA02875 ankyrin repeat protei 99.7 6.7E-17 1.5E-21 96.0 9.2 84 2-89 128-213 (413)
31 PHA02716 CPXV016; CPX019; EVM0 99.7 4.9E-17 1.1E-21 101.8 8.7 45 3-50 206-253 (764)
32 PHA03100 ankyrin repeat protei 99.7 6.4E-17 1.4E-21 97.5 8.9 81 3-87 170-259 (480)
33 PF13637 Ank_4: Ankyrin repeat 99.7 5.1E-17 1.1E-21 71.8 6.3 53 9-64 1-54 (54)
34 PHA02798 ankyrin-like protein; 99.7 6.4E-17 1.4E-21 97.9 8.4 83 2-88 64-155 (489)
35 PHA02876 ankyrin repeat protei 99.7 1.2E-16 2.7E-21 99.8 9.2 82 2-87 368-451 (682)
36 KOG4214 Myotrophin and similar 99.7 7.6E-17 1.6E-21 77.1 6.2 74 8-85 33-107 (117)
37 PHA02884 ankyrin repeat protei 99.7 2.1E-16 4.5E-21 90.5 9.2 84 2-89 25-115 (300)
38 KOG0514 Ankyrin repeat protein 99.7 8.4E-18 1.8E-22 96.7 3.3 76 8-87 339-416 (452)
39 PHA02716 CPXV016; CPX019; EVM0 99.7 1.8E-16 3.8E-21 99.4 9.1 82 2-87 169-256 (764)
40 PF12796 Ank_2: Ankyrin repeat 99.7 1.8E-16 3.9E-21 76.5 7.3 62 9-74 26-88 (89)
41 PHA02795 ankyrin-like protein; 99.7 1.2E-16 2.7E-21 94.9 7.8 78 8-89 187-265 (437)
42 PHA02730 ankyrin-like protein; 99.7 1.6E-16 3.5E-21 98.3 8.5 81 4-87 36-123 (672)
43 PHA02946 ankyin-like protein; 99.7 1.7E-16 3.6E-21 95.3 8.3 82 2-88 166-252 (446)
44 PHA02798 ankyrin-like protein; 99.7 4.4E-16 9.5E-21 94.4 8.8 83 2-88 102-192 (489)
45 PHA02743 Viral ankyrin protein 99.7 3.1E-16 6.6E-21 83.5 7.2 83 3-89 14-105 (166)
46 PF13857 Ank_5: Ankyrin repeat 99.7 1.1E-16 2.5E-21 71.1 4.5 48 37-85 8-56 (56)
47 KOG0510 Ankyrin repeat protein 99.7 2.3E-16 5E-21 97.9 7.1 87 2-89 299-388 (929)
48 PHA02917 ankyrin-like protein; 99.7 1.1E-15 2.3E-20 95.3 8.9 81 3-87 390-494 (661)
49 PHA02917 ankyrin-like protein; 99.7 1.1E-15 2.3E-20 95.3 8.3 84 2-89 129-240 (661)
50 PHA02989 ankyrin repeat protei 99.7 1.4E-15 3.1E-20 92.2 8.7 45 44-89 256-300 (494)
51 PHA02989 ankyrin repeat protei 99.7 1.7E-15 3.6E-20 92.0 8.9 84 2-88 101-191 (494)
52 PF13857 Ank_5: Ankyrin repeat 99.6 4E-16 8.6E-21 69.4 4.6 47 2-51 9-56 (56)
53 cd00204 ANK ankyrin repeats; 99.6 4.5E-15 9.8E-20 74.8 9.0 81 4-88 2-83 (126)
54 PHA02876 ankyrin repeat protei 99.6 2.8E-15 6E-20 93.8 9.0 81 3-87 335-417 (682)
55 KOG0508 Ankyrin repeat protein 99.6 2.6E-16 5.7E-21 93.3 4.1 76 7-86 115-191 (615)
56 KOG0195 Integrin-linked kinase 99.6 8.1E-16 1.8E-20 86.9 5.6 81 2-86 60-141 (448)
57 PLN03192 Voltage-dependent pot 99.6 3.7E-15 8.1E-20 94.9 9.1 79 7-89 523-602 (823)
58 KOG0508 Ankyrin repeat protein 99.6 4.2E-16 9E-21 92.4 4.4 84 2-90 143-227 (615)
59 TIGR00870 trp transient-recept 99.6 2.6E-15 5.5E-20 94.7 7.3 78 7-88 126-218 (743)
60 KOG0514 Ankyrin repeat protein 99.6 1.2E-14 2.7E-19 84.0 7.2 83 2-89 295-384 (452)
61 PHA02795 ankyrin-like protein; 99.6 1.3E-14 2.9E-19 86.4 7.5 66 2-70 214-288 (437)
62 PHA02736 Viral ankyrin protein 99.6 2.2E-14 4.8E-19 75.5 7.1 66 2-70 84-152 (154)
63 COG0666 Arp FOG: Ankyrin repea 99.6 2.3E-14 5E-19 78.5 7.3 87 2-89 99-191 (235)
64 PTZ00322 6-phosphofructo-2-kin 99.6 2.3E-14 4.9E-19 89.6 7.6 71 13-87 86-157 (664)
65 PHA02792 ankyrin-like protein; 99.6 3.7E-14 8E-19 87.4 8.3 82 2-87 365-452 (631)
66 PTZ00322 6-phosphofructo-2-kin 99.5 6.1E-14 1.3E-18 87.7 8.6 81 2-86 108-196 (664)
67 PHA02730 ankyrin-like protein; 99.5 5.7E-14 1.2E-18 87.2 8.1 82 2-87 410-505 (672)
68 cd00204 ANK ankyrin repeats; 99.5 3.4E-13 7.3E-18 67.9 9.0 82 3-88 34-116 (126)
69 KOG1710 MYND Zn-finger and ank 99.5 8.6E-14 1.9E-18 78.6 7.0 82 2-87 38-121 (396)
70 KOG0515 p53-interacting protei 99.5 4.4E-14 9.5E-19 85.1 5.9 77 4-83 578-655 (752)
71 KOG0507 CASK-interacting adapt 99.5 1.4E-14 3.1E-19 89.6 3.4 84 2-89 75-159 (854)
72 KOG0502 Integral membrane anky 99.5 4E-14 8.7E-19 77.4 4.3 80 7-90 191-271 (296)
73 KOG3676 Ca2+-permeable cation 99.5 1.9E-13 4.1E-18 85.1 6.9 78 7-88 182-283 (782)
74 PHA02792 ankyrin-like protein; 99.5 1.1E-13 2.4E-18 85.4 5.7 86 2-88 98-225 (631)
75 KOG0783 Uncharacterized conser 99.5 4.4E-14 9.5E-19 88.7 3.6 82 2-87 45-128 (1267)
76 KOG4177 Ankyrin [Cell wall/mem 99.5 2.6E-13 5.6E-18 87.7 6.5 78 8-89 506-584 (1143)
77 KOG0512 Fetal globin-inducing 99.4 7.2E-13 1.6E-17 70.2 6.2 75 11-88 65-140 (228)
78 PF13637 Ank_4: Ankyrin repeat 99.4 5.6E-13 1.2E-17 58.7 5.0 45 44-89 1-45 (54)
79 KOG4214 Myotrophin and similar 99.4 1.5E-12 3.2E-17 62.5 6.0 74 11-88 4-77 (117)
80 KOG0505 Myosin phosphatase, re 99.4 4.9E-13 1.1E-17 80.2 4.6 81 3-87 192-273 (527)
81 COG0666 Arp FOG: Ankyrin repea 99.4 7.3E-12 1.6E-16 68.5 8.6 83 4-89 68-158 (235)
82 KOG0507 CASK-interacting adapt 99.4 2.3E-13 5.1E-18 84.4 2.8 84 2-89 42-126 (854)
83 KOG3676 Ca2+-permeable cation 99.4 4.7E-12 1E-16 79.1 7.6 79 7-89 238-319 (782)
84 KOG0505 Myosin phosphatase, re 99.3 1.4E-12 3E-17 78.3 4.0 79 3-85 67-146 (527)
85 KOG0515 p53-interacting protei 99.3 7.4E-12 1.6E-16 75.8 6.5 71 13-87 554-625 (752)
86 PF13606 Ank_3: Ankyrin repeat 99.3 5.3E-12 1.2E-16 49.1 3.6 25 8-32 1-25 (30)
87 TIGR00870 trp transient-recept 99.2 2.2E-11 4.7E-16 77.3 6.1 80 7-89 173-268 (743)
88 PF00023 Ank: Ankyrin repeat H 99.2 2.9E-11 6.3E-16 48.1 4.0 31 8-41 1-31 (33)
89 KOG0818 GTPase-activating prot 99.2 2.2E-10 4.9E-15 69.0 7.6 83 4-88 122-210 (669)
90 KOG0705 GTPase-activating prot 99.1 4.4E-10 9.6E-15 68.8 5.4 62 6-70 658-720 (749)
91 KOG0506 Glutaminase (contains 99.1 1.3E-10 2.9E-15 69.6 2.9 79 6-88 503-583 (622)
92 PF13606 Ank_3: Ankyrin repeat 99.0 9.7E-10 2.1E-14 42.7 3.0 27 44-70 2-28 (30)
93 PF00023 Ank: Ankyrin repeat H 99.0 1.5E-09 3.2E-14 43.0 3.4 31 44-75 2-32 (33)
94 KOG0522 Ankyrin repeat protein 99.0 3.4E-09 7.3E-14 64.2 6.1 60 2-64 48-108 (560)
95 KOG1710 MYND Zn-finger and ank 98.9 9.2E-09 2E-13 58.8 6.6 77 9-88 12-89 (396)
96 KOG0522 Ankyrin repeat protein 98.9 7E-09 1.5E-13 62.9 5.6 77 11-89 22-99 (560)
97 KOG2384 Major histocompatibili 98.8 2.4E-08 5.1E-13 53.9 6.4 66 2-69 5-71 (223)
98 KOG0818 GTPase-activating prot 98.8 1.1E-08 2.4E-13 62.0 5.4 56 6-64 164-220 (669)
99 KOG4369 RTK signaling protein 98.8 1.6E-09 3.5E-14 70.9 1.0 83 3-89 784-868 (2131)
100 KOG0782 Predicted diacylglycer 98.8 2.2E-08 4.8E-13 61.8 5.2 80 5-86 895-975 (1004)
101 KOG0506 Glutaminase (contains 98.7 7.1E-09 1.5E-13 62.5 2.3 64 2-67 532-596 (622)
102 KOG4369 RTK signaling protein 98.7 3.3E-09 7.2E-14 69.6 0.6 76 9-87 757-833 (2131)
103 KOG0521 Putative GTPase activa 98.7 2.2E-08 4.9E-13 64.1 3.7 78 7-88 654-732 (785)
104 KOG0511 Ankyrin repeat protein 98.7 1.4E-07 3.1E-12 55.8 6.6 68 11-82 38-106 (516)
105 KOG0705 GTPase-activating prot 98.5 4.3E-07 9.4E-12 56.2 6.1 76 13-90 628-706 (749)
106 smart00248 ANK ankyrin repeats 98.0 1.6E-05 3.4E-10 29.2 3.5 25 8-32 1-25 (30)
107 KOG2505 Ankyrin repeat protein 98.0 1.4E-05 3.1E-10 49.0 4.7 64 21-86 403-471 (591)
108 KOG0520 Uncharacterized conser 97.8 2.5E-05 5.5E-10 51.2 3.8 64 2-65 634-701 (975)
109 KOG0782 Predicted diacylglycer 97.8 3.4E-05 7.4E-10 48.4 3.5 62 2-66 927-989 (1004)
110 KOG3609 Receptor-activated Ca2 97.8 4.8E-05 1E-09 49.1 4.1 70 2-71 55-158 (822)
111 KOG0783 Uncharacterized conser 97.7 6.9E-05 1.5E-09 48.9 4.1 48 3-53 79-128 (1267)
112 KOG2384 Major histocompatibili 97.7 9.9E-05 2.1E-09 40.3 3.9 54 36-90 3-58 (223)
113 KOG0520 Uncharacterized conser 97.6 2.5E-05 5.5E-10 51.2 1.5 29 41-69 637-666 (975)
114 KOG2505 Ankyrin repeat protein 97.6 8.5E-05 1.8E-09 45.8 3.3 46 6-54 427-473 (591)
115 smart00248 ANK ankyrin repeats 97.4 0.00029 6.2E-09 25.5 2.9 27 44-70 2-28 (30)
116 KOG0511 Ankyrin repeat protein 97.2 0.00055 1.2E-08 41.2 3.7 33 2-34 62-94 (516)
117 KOG0521 Putative GTPase activa 96.5 0.0022 4.8E-08 42.2 2.4 56 2-60 682-738 (785)
118 PF11929 DUF3447: Domain of un 95.5 0.1 2.2E-06 24.4 4.9 48 10-66 7-54 (76)
119 PF03158 DUF249: Multigene fam 93.6 0.52 1.1E-05 26.1 5.3 43 14-64 148-190 (192)
120 KOG3609 Receptor-activated Ca2 92.5 0.2 4.3E-06 33.5 3.2 28 8-35 130-157 (822)
121 PF06128 Shigella_OspC: Shigel 90.7 1.1 2.4E-05 25.9 4.6 47 21-69 229-279 (284)
122 PF06128 Shigella_OspC: Shigel 82.4 2.7 5.9E-05 24.4 3.2 29 5-33 250-278 (284)
123 KOG1709 Guanidinoacetate methy 60.1 14 0.00031 21.5 2.7 30 3-32 9-38 (271)
124 cd03572 ENTH_epsin_related ENT 40.3 26 0.00057 18.2 1.6 44 22-66 37-80 (122)
125 PF04964 Flp_Fap: Flp/Fap pili 38.0 32 0.00069 14.4 1.5 17 5-21 3-19 (46)
126 PF12645 HTH_16: Helix-turn-he 33.7 54 0.0012 14.9 2.6 20 12-31 2-21 (65)
127 KOG3836 HLH transcription fact 29.1 17 0.00037 24.2 -0.1 30 3-32 423-452 (605)
128 KOG4591 Uncharacterized conser 23.0 1.7E+02 0.0036 17.1 2.9 43 45-87 223-269 (280)
129 PF12854 PPR_1: PPR repeat 20.3 75 0.0016 11.9 2.6 21 11-31 12-32 (34)
130 PF12514 DUF3718: Protein of u 20.2 1.1E+02 0.0025 14.0 2.4 22 7-28 33-54 (68)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=7.4e-23 Score=107.86 Aligned_cols=82 Identities=21% Similarity=0.285 Sum_probs=60.1
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhc-CCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEI-DPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
+|.+|..||||||+|+..|+.++++.|+.+ + ++++.... |.|+||||+..|+.+++.+|++.|+.+ +++|..|.
T Consensus 65 ~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~---advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i-~~kD~~~q 140 (226)
T KOG4412|consen 65 PDDKDDAGWTPLHIAASNGNDEVVKELLNRSG---ADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALI-RIKDKQGQ 140 (226)
T ss_pred CCCccccCCchhhhhhhcCcHHHHHHHhcCCC---CCcceecCCCcceehhhhcCChhhHHHHHHhcCCCC-cccccccC
Confidence 467777788888888887887888777777 6 55555554 777777777777777777777777775 56777777
Q ss_pred cHHHHHHh
Q 041196 80 NFFIMQWS 87 (91)
Q Consensus 80 t~l~~a~~ 87 (91)
||||=|+.
T Consensus 141 tplHRAAa 148 (226)
T KOG4412|consen 141 TPLHRAAA 148 (226)
T ss_pred chhHHHHh
Confidence 77776654
No 2
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.87 E-value=6.5e-22 Score=103.85 Aligned_cols=84 Identities=18% Similarity=0.136 Sum_probs=78.1
Q ss_pred CcccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 1 LIKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 1 ~~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
.+|.+|.+|+||||.|+.+|+.++++.|+..| ++...+.. |+||||.|+..++.+++..|+.+|+++ +..+....
T Consensus 89 ~vNtrD~D~YTpLHRAaYn~h~div~~ll~~g---An~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDV-nA~t~g~l 164 (228)
T KOG0512|consen 89 HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSG---ANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADV-NAQTKGLL 164 (228)
T ss_pred cccccccccccHHHHHHhcCchHHHHHHHHcc---CCcccccccCccchhhhhcccchhHHHHHHhccCcc-cccccccc
Confidence 37999999999999999999999999999999 88888887 999999999999999999999999998 67888899
Q ss_pred cHHHHHHhh
Q 041196 80 NFFIMQWSF 88 (91)
Q Consensus 80 t~l~~a~~~ 88 (91)
||||+|+..
T Consensus 165 tpLhlaa~~ 173 (228)
T KOG0512|consen 165 TPLHLAAGN 173 (228)
T ss_pred hhhHHhhcc
Confidence 999998753
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.86 E-value=9.4e-22 Score=118.25 Aligned_cols=84 Identities=23% Similarity=0.288 Sum_probs=76.6
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC--CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR--KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
++..|++|.|+||||+.+++++++++|+++| ++++.... +.||||+|++.|+..++.+|+++|+++ ..+|.+|.
T Consensus 71 v~~~D~~g~tlLHWAAiNNrl~v~r~li~~g---advn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdp-t~~D~~G~ 146 (600)
T KOG0509|consen 71 VNNPDREGVTLLHWAAINNRLDVARYLISHG---ADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADP-TLKDKQGL 146 (600)
T ss_pred CCCCCcCCccceeHHHHcCcHHHHHHHHHcC---CCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCC-ceecCCCC
Confidence 6788999999999999999999999999999 66666653 889999999999999999999999997 78999999
Q ss_pred cHHHHHHhhc
Q 041196 80 NFFIMQWSFF 89 (91)
Q Consensus 80 t~l~~a~~~~ 89 (91)
+|+|+|+++.
T Consensus 147 ~~lHla~~~~ 156 (600)
T KOG0509|consen 147 TPLHLAAQFG 156 (600)
T ss_pred cHHHHHHHhC
Confidence 9999999864
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=1.7e-21 Score=102.78 Aligned_cols=80 Identities=31% Similarity=0.304 Sum_probs=75.1
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
+|..+..|.|+||||+..|..+++++|++.| +.++.++. +.||||-|+..|..+++++|+..|+.+ +..|..|+|
T Consensus 99 vna~tn~G~T~LHyAagK~r~eIaqlLle~g---a~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~-n~qDk~G~T 174 (226)
T KOG4412|consen 99 VNATTNGGQTCLHYAAGKGRLEIAQLLLEKG---ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPL-NTQDKYGFT 174 (226)
T ss_pred cceecCCCcceehhhhcCChhhHHHHHHhcC---CCCcccccccCchhHHHHhccchhhHHHHHhcCCCC-CcccccCcc
Confidence 5788899999999999999999999999999 77888887 999999999999999999999999986 689999999
Q ss_pred HHHHH
Q 041196 81 FFIMQ 85 (91)
Q Consensus 81 ~l~~a 85 (91)
|||.|
T Consensus 175 pL~~a 179 (226)
T KOG4412|consen 175 PLHHA 179 (226)
T ss_pred HHHHH
Confidence 99988
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.82 E-value=1.6e-19 Score=102.73 Aligned_cols=82 Identities=17% Similarity=0.076 Sum_probs=63.1
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHH
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 82 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 82 (91)
+.+|.+|+||||+|+..|+.++++.|++.| ++++..+ +.||||+|+..|+.+++++|++.|+++ ..++..|.|||
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~g---a~~n~~d-~~TpLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpL 98 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLNAG---ALKNLLE-NEFPLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTAL 98 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCc---CCCcCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 457788888888888888888888888888 4444444 578888888888888888888888776 56778888888
Q ss_pred HHHHhhc
Q 041196 83 IMQWSFF 89 (91)
Q Consensus 83 ~~a~~~~ 89 (91)
|+|+...
T Consensus 99 h~Aa~~g 105 (284)
T PHA02791 99 YYAVDSG 105 (284)
T ss_pred HHHHHcC
Confidence 8887653
No 6
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=96.15 Aligned_cols=83 Identities=18% Similarity=0.299 Sum_probs=71.9
Q ss_pred cccccCCCchHHHHHHHhCCHHH---HHHHHhcCCCCCCcccCC-C-CchHHHHHHHhCHHHHHHHHHh-cCcccccccC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQ---IYVLLEIDPTASNIVDKD-R-KMTALHLAAARGLARANERIIS-LAAKCYELVD 75 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~---~~~ll~~~~~~~~~~~~~-~-~~~~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~ 75 (91)
++.+|..|+||||+|+..++.+. +++|++.| ++++.++ . |.||||+|+..++.+++++|+. .|+++ ..++
T Consensus 50 ~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G---adin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~-~~~d 125 (166)
T PHA02743 50 LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG---ADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNL-GAIN 125 (166)
T ss_pred hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC---CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCc-cCcC
Confidence 46789999999999999987654 78999999 7777765 3 8999999999999999999995 78886 6789
Q ss_pred CCCCcHHHHHHhh
Q 041196 76 DRGWNFFIMQWSF 88 (91)
Q Consensus 76 ~~~~t~l~~a~~~ 88 (91)
..|.||||+|+..
T Consensus 126 ~~g~tpL~~A~~~ 138 (166)
T PHA02743 126 YQHETAYHIAYKM 138 (166)
T ss_pred CCCCCHHHHHHHc
Confidence 9999999999864
No 7
>PHA02741 hypothetical protein; Provisional
Probab=99.82 E-value=3.3e-19 Score=95.09 Aligned_cols=84 Identities=25% Similarity=0.222 Sum_probs=73.5
Q ss_pred cccccCCCchHHHHHHHhCC----HHHHHHHHhcCCCCCCcccCC--CCchHHHHHHHhCHHHHHHHHHh-cCccccccc
Q 041196 2 IKETDQYGWALIHYAAYYNQ----YQQIYVLLEIDPTASNIVDKD--RKMTALHLAAARGLARANERIIS-LAAKCYELV 74 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~--~~~~~l~~a~~~~~~~~~~~l~~-~~~~~~~~~ 74 (91)
++.+|..|+||||+|+..++ .+++++|++.| ++++.++ .|.||||+|+..++.+++++|+. .++++ +.+
T Consensus 53 in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g---adin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~-~~~ 128 (169)
T PHA02741 53 LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG---ADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL-HFC 128 (169)
T ss_pred hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC---CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CcC
Confidence 57789999999999999998 58899999999 6666655 28999999999999999999997 48886 678
Q ss_pred CCCCCcHHHHHHhhc
Q 041196 75 DDRGWNFFIMQWSFF 89 (91)
Q Consensus 75 ~~~~~t~l~~a~~~~ 89 (91)
+..|.|||++|+...
T Consensus 129 n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 129 NADNKSPFELAIDNE 143 (169)
T ss_pred CCCCCCHHHHHHHCC
Confidence 999999999998754
No 8
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.80 E-value=5e-19 Score=106.69 Aligned_cols=83 Identities=19% Similarity=0.204 Sum_probs=71.7
Q ss_pred cccccCC-CchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETDQY-GWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d~~-g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
+|.+|.. |.||||+|+..|+.++++.|++.| ++++..+. |.||||+|+..++.+++++|++.|+++ +.++..|.
T Consensus 160 in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g---ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i-n~~d~~g~ 235 (477)
T PHA02878 160 INMKDRHKGNTALHYATENKDQRLTELLLSYG---ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST-DARDKCGN 235 (477)
T ss_pred CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-CCCCCCCC
Confidence 4567777 999999999999999999999999 66666665 889999999999999999999999997 67899999
Q ss_pred cHHHHHHhh
Q 041196 80 NFFIMQWSF 88 (91)
Q Consensus 80 t~l~~a~~~ 88 (91)
||||+|+..
T Consensus 236 TpLh~A~~~ 244 (477)
T PHA02878 236 TPLHISVGY 244 (477)
T ss_pred CHHHHHHHh
Confidence 999998864
No 9
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.80 E-value=8.1e-19 Score=100.26 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=68.8
Q ss_pred cCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccC-CC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHH
Q 041196 6 DQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDK-DR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFI 83 (91)
Q Consensus 6 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~ 83 (91)
|..|.||||+|+..++.++++.|+++| ++++.+ .. |.||||+|+..++.+++++|+..|+++ ..++..|.|||+
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~G---ADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdi-n~kd~~G~TpL~ 142 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYG---ADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADI-NIQTNDMVTPIE 142 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC---CCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 468999999999999999999999999 666664 33 889999999999999999999999997 678999999999
Q ss_pred HHHhh
Q 041196 84 MQWSF 88 (91)
Q Consensus 84 ~a~~~ 88 (91)
+|++.
T Consensus 143 ~A~~~ 147 (300)
T PHA02884 143 LALMI 147 (300)
T ss_pred HHHHh
Confidence 98763
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.80 E-value=3.7e-19 Score=107.28 Aligned_cols=85 Identities=25% Similarity=0.284 Sum_probs=75.3
Q ss_pred ccccc-CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETD-QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
+|..+ .-+.||||||+++|+..+++.|+++| +++..++. |.+|+|+|++.++..++.+|+..++++ ..+|.+|+
T Consensus 104 vn~~gG~l~stPLHWAar~G~~~vv~lLlqhG---Adpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~-d~~D~~gr 179 (600)
T KOG0509|consen 104 VNAIGGVLGSTPLHWAARNGHISVVDLLLQHG---ADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADI-DLRDNNGR 179 (600)
T ss_pred ccccCCCCCCCcchHHHHcCcHHHHHHHHHcC---CCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccC-CCcCCCCC
Confidence 45555 46789999999999999999999999 77777776 999999999999999999999999986 78999999
Q ss_pred cHHHHHHhhcc
Q 041196 80 NFFIMQWSFFF 90 (91)
Q Consensus 80 t~l~~a~~~~~ 90 (91)
|||++|+..++
T Consensus 180 TpLmwAaykg~ 190 (600)
T KOG0509|consen 180 TPLMWAAYKGF 190 (600)
T ss_pred CHHHHHHHhcc
Confidence 99999987654
No 11
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.79 E-value=1.3e-18 Score=103.85 Aligned_cols=82 Identities=16% Similarity=0.193 Sum_probs=57.7
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcH
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 81 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 81 (91)
+.+|..|.||||+|+..|+.+++++|++.| ++++.++. |.||||+|+..++.+++++|++.|+++ ..++..|.||
T Consensus 118 n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g---ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tp 193 (434)
T PHA02874 118 NIKDAELKTFLHYAIKKGDLESIKMLFEYG---ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESP 193 (434)
T ss_pred CCCCCCCccHHHHHHHCCCHHHHHHHHhCC---CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCH
Confidence 456677777777777777777777777777 55555554 677777777777777777777777765 4566777777
Q ss_pred HHHHHhh
Q 041196 82 FIMQWSF 88 (91)
Q Consensus 82 l~~a~~~ 88 (91)
||+|++.
T Consensus 194 L~~A~~~ 200 (434)
T PHA02874 194 LHNAAEY 200 (434)
T ss_pred HHHHHHc
Confidence 7777654
No 12
>PHA02741 hypothetical protein; Provisional
Probab=99.79 E-value=1.2e-18 Score=93.00 Aligned_cols=88 Identities=19% Similarity=0.165 Sum_probs=71.8
Q ss_pred CcccccCCCchHHHHHHHhCCHHHHHHHHhcC---CCCCCcccCCC-CchHHHHHHHhCH----HHHHHHHHhcCccccc
Q 041196 1 LIKETDQYGWALIHYAAYYNQYQQIYVLLEID---PTASNIVDKDR-KMTALHLAAARGL----ARANERIISLAAKCYE 72 (91)
Q Consensus 1 ~~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~~-~~~~l~~a~~~~~----~~~~~~l~~~~~~~~~ 72 (91)
+++.+|..|.|+||+|+..|+.++++.|+... ...++++.++. |.||||+|+..++ .+++++|++.|+++ +
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi-n 91 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI-N 91 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-C
Confidence 35788999999999999999999999885421 11156666666 9999999999998 58899999999997 5
Q ss_pred ccCC-CCCcHHHHHHhhc
Q 041196 73 LVDD-RGWNFFIMQWSFF 89 (91)
Q Consensus 73 ~~~~-~~~t~l~~a~~~~ 89 (91)
.++. .|.||||+|+...
T Consensus 92 ~~~~~~g~TpLh~A~~~~ 109 (169)
T PHA02741 92 AQEMLEGDTALHLAAHRR 109 (169)
T ss_pred CCCcCCCCCHHHHHHHcC
Confidence 6774 8999999998754
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.79 E-value=1.5e-18 Score=102.97 Aligned_cols=82 Identities=20% Similarity=0.175 Sum_probs=65.2
Q ss_pred cccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHH
Q 041196 4 ETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 82 (91)
Q Consensus 4 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 82 (91)
..+.+|.||||+|+..++.++++.|++.| ++++..+. |.||||+|+..|+.+++++|++.|+++ ..++..|.|||
T Consensus 97 ~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g---ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~TpL 172 (413)
T PHA02875 97 VFYKDGMTPLHLATILKKLDIMKLLIARG---ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL-DIEDCCGCTPL 172 (413)
T ss_pred cccCCCCCHHHHHHHhCCHHHHHHHHhCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHH
Confidence 34567888888888888888888888888 55555555 788888888888888888888888886 56788888888
Q ss_pred HHHHhhc
Q 041196 83 IMQWSFF 89 (91)
Q Consensus 83 ~~a~~~~ 89 (91)
|+|+..+
T Consensus 173 ~~A~~~g 179 (413)
T PHA02875 173 IIAMAKG 179 (413)
T ss_pred HHHHHcC
Confidence 8887653
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.77 E-value=3.9e-19 Score=93.48 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=68.4
Q ss_pred cccCCCchHHHHHHHhCCH---HHHHHHHhcCCCCCCcccCC-C-CchHHHHHHHhCHHHHHHHHHhc-CcccccccCCC
Q 041196 4 ETDQYGWALIHYAAYYNQY---QQIYVLLEIDPTASNIVDKD-R-KMTALHLAAARGLARANERIISL-AAKCYELVDDR 77 (91)
Q Consensus 4 ~~d~~g~t~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~-~-~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~ 77 (91)
.+|..|.||||+|+..++. ++++.|++.| ++++.++ . |.||||+|+..++.+++++|+.. ++++ +.++..
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g---adin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~-n~~~~~ 125 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG---ADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNM-EILNYA 125 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHHHcC---CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC-ccccCC
Confidence 4577888888888887765 4678899999 6777765 3 89999999999999999999974 8886 678999
Q ss_pred CCcHHHHHHhhc
Q 041196 78 GWNFFIMQWSFF 89 (91)
Q Consensus 78 ~~t~l~~a~~~~ 89 (91)
|.||||+|+...
T Consensus 126 g~tpL~~A~~~~ 137 (154)
T PHA02736 126 FKTPYYVACERH 137 (154)
T ss_pred CCCHHHHHHHcC
Confidence 999999998753
No 15
>PHA02946 ankyin-like protein; Provisional
Probab=99.77 E-value=4e-18 Score=102.19 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=68.3
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC--HHHHHHHHHhcCcccccccCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG--LARANERIISLAAKCYELVDDRG 78 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~ 78 (91)
+|.+|.+|.||||+|+..++.+++++|+++| ++++.++. |.||||+|+..+ ..+++++|++.|+++....+..|
T Consensus 65 vn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G---Adin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g 141 (446)
T PHA02946 65 PNETDDDGNYPLHIASKINNNRIVAMLLTHG---ADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEG 141 (446)
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHCc---CCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCC
Confidence 5788999999999999999999999999999 77777776 899999988765 47888999999988743467788
Q ss_pred CcHHHHHH
Q 041196 79 WNFFIMQW 86 (91)
Q Consensus 79 ~t~l~~a~ 86 (91)
.|||+.|.
T Consensus 142 ~tpL~aa~ 149 (446)
T PHA02946 142 CGPLLACT 149 (446)
T ss_pred CcHHHHHH
Confidence 88887443
No 16
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=1.6e-18 Score=110.94 Aligned_cols=85 Identities=22% Similarity=0.325 Sum_probs=78.4
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
++.++.+|+||||.|+.+|+..+|++|+++| +++..++. |+||||.|+..|+.+++.+|+++|+.+ +..|.+|.|
T Consensus 533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~g---Adv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v-na~d~~g~T 608 (1143)
T KOG4177|consen 533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHG---ADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV-NAADLDGFT 608 (1143)
T ss_pred eehhcccccchHHHHHhcCCchHHHHhhhCC---ccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC-CcccccCcc
Confidence 4667889999999999999999999999999 77777777 999999999999999999999999997 679999999
Q ss_pred HHHHHHhhcc
Q 041196 81 FFIMQWSFFF 90 (91)
Q Consensus 81 ~l~~a~~~~~ 90 (91)
||++|.++.+
T Consensus 609 pL~iA~~lg~ 618 (1143)
T KOG4177|consen 609 PLHIAVRLGY 618 (1143)
T ss_pred hhHHHHHhcc
Confidence 9999998764
No 17
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.77 E-value=6.3e-18 Score=92.80 Aligned_cols=80 Identities=18% Similarity=0.193 Sum_probs=43.1
Q ss_pred ccccCCCchHHHHHHHh--CCHHHHHHHHhcCCCCCCcccCCC-CchHHHH-HHHhCHHHHHHHHHhcCcccccccCCCC
Q 041196 3 KETDQYGWALIHYAAYY--NQYQQIYVLLEIDPTASNIVDKDR-KMTALHL-AAARGLARANERIISLAAKCYELVDDRG 78 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~--~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~-a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 78 (91)
|.+|..|.||||+|+.. ++.+++++|++.| ++++.++. |.||+|. ++..++.+++++|++.|+++ ..++..|
T Consensus 117 n~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g---adin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi-~~~d~~g 192 (209)
T PHA02859 117 TEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG---VSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI-NETNKSG 192 (209)
T ss_pred CCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC---CCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC-CCCCCCC
Confidence 45555556666655432 3455556666555 44444444 5556653 33444555556666555554 3455556
Q ss_pred CcHHHHHH
Q 041196 79 WNFFIMQW 86 (91)
Q Consensus 79 ~t~l~~a~ 86 (91)
.|||++|.
T Consensus 193 ~tpl~la~ 200 (209)
T PHA02859 193 YNCYDLIK 200 (209)
T ss_pred CCHHHHHh
Confidence 66665554
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.77 E-value=5.7e-18 Score=101.17 Aligned_cols=83 Identities=23% Similarity=0.144 Sum_probs=70.2
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
+|.+|..|.||||+|+..++.+++++|++.| ++++..+. |.||||+|+..|+.+++++|++.|+++ ..++..|.|
T Consensus 150 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g---~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i-~~~~~~g~T 225 (434)
T PHA02874 150 VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG---AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI-MNKCKNGFT 225 (434)
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCC
Confidence 4678889999999999999999999999999 66666665 899999999999999999999999886 456777788
Q ss_pred HHHHHHhh
Q 041196 81 FFIMQWSF 88 (91)
Q Consensus 81 ~l~~a~~~ 88 (91)
|||.|+..
T Consensus 226 pL~~A~~~ 233 (434)
T PHA02874 226 PLHNAIIH 233 (434)
T ss_pred HHHHHHHC
Confidence 87777653
No 19
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.76 E-value=2.3e-18 Score=106.56 Aligned_cols=85 Identities=24% Similarity=0.314 Sum_probs=66.4
Q ss_pred CcccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHh-cCcccccccCCCC
Q 041196 1 LIKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIIS-LAAKCYELVDDRG 78 (91)
Q Consensus 1 ~~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~ 78 (91)
|+|..|.+|.||||+|++.|+.++++.|+..| ++++.+.. +.+|||.|+..|++.+++-|++ .+....+..|..|
T Consensus 265 lv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~G---a~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g 341 (929)
T KOG0510|consen 265 LVNDEDNDGCTPLHYAARQGGPESVDNLLGFG---ASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHG 341 (929)
T ss_pred HhhcccccCCchHHHHHHcCChhHHHHHHHcC---CcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccC
Confidence 57889999999999999999999999999999 66666655 7788888888888888877776 4444345567778
Q ss_pred CcHHHHHHhh
Q 041196 79 WNFFIMQWSF 88 (91)
Q Consensus 79 ~t~l~~a~~~ 88 (91)
.||||+|++.
T Consensus 342 ~tpLHlaa~~ 351 (929)
T KOG0510|consen 342 MTPLHLAAKS 351 (929)
T ss_pred CCchhhhhhc
Confidence 8888877653
No 20
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.9e-18 Score=97.41 Aligned_cols=85 Identities=22% Similarity=0.309 Sum_probs=75.5
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
+|.-|..|.+|||||++.|+..+++.|+..| +-++.... ..+|||+|+.+|+.+++..|++..+++ +..+..|.|
T Consensus 27 ln~gddhgfsplhwaakegh~aivemll~rg---arvn~tnmgddtplhlaaahghrdivqkll~~kadv-navnehgnt 102 (448)
T KOG0195|consen 27 LNVGDDHGFSPLHWAAKEGHVAIVEMLLSRG---ARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADV-NAVNEHGNT 102 (448)
T ss_pred cccccccCcchhhhhhhcccHHHHHHHHhcc---cccccccCCCCcchhhhhhcccHHHHHHHHHHhccc-chhhccCCC
Confidence 4677889999999999999999999999999 55555554 469999999999999999999999997 679999999
Q ss_pred HHHHHHhhcc
Q 041196 81 FFIMQWSFFF 90 (91)
Q Consensus 81 ~l~~a~~~~~ 90 (91)
|||+||-.+|
T Consensus 103 plhyacfwgy 112 (448)
T KOG0195|consen 103 PLHYACFWGY 112 (448)
T ss_pred chhhhhhhcH
Confidence 9999998766
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.76 E-value=1.2e-17 Score=91.67 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=56.5
Q ss_pred cccccCCCchHHHHHHHhC--CHHHHHHHHhcCCCCCCcccCC-C-CchHHHHHHHh---CHHHHHHHHHhcCccccccc
Q 041196 2 IKETDQYGWALIHYAAYYN--QYQQIYVLLEIDPTASNIVDKD-R-KMTALHLAAAR---GLARANERIISLAAKCYELV 74 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~-~-~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~ 74 (91)
+|.+|..|.||||+|+..+ +.+++++|++.| ++++.++ . |.||||+++.. +..+++++|++.|+++ +.+
T Consensus 44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g---advn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi-n~~ 119 (209)
T PHA02859 44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENG---ADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI-TEE 119 (209)
T ss_pred hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCC---CCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC-CCc
Confidence 3566777778888777643 677778888777 5555543 2 67777776543 3567777777777776 567
Q ss_pred CCCCCcHHHHHHh
Q 041196 75 DDRGWNFFIMQWS 87 (91)
Q Consensus 75 ~~~~~t~l~~a~~ 87 (91)
+..|.||||.|+.
T Consensus 120 d~~G~TpLh~a~~ 132 (209)
T PHA02859 120 DEDGKNLLHMYMC 132 (209)
T ss_pred CCCCCCHHHHHHH
Confidence 7777777777654
No 22
>PHA03095 ankyrin-like protein; Provisional
Probab=99.76 E-value=7e-18 Score=101.38 Aligned_cols=84 Identities=26% Similarity=0.215 Sum_probs=73.8
Q ss_pred cccccCCCchHHHHHHHhCCH--HHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQY--QQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRG 78 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~--~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 78 (91)
++.+|..|.||||+|+..++. ..++.|+..| ++++..+. |.||||+|+..|+.+++++|++.|+++ ..++..|
T Consensus 215 ~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g---~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~-n~~~~~g 290 (471)
T PHA03095 215 PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAG---ISINARNRYGQTPLHYAAVFNNPRACRRLIALGADI-NAVSSDG 290 (471)
T ss_pred CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCC
Confidence 467899999999999998864 5778899999 67777776 999999999999999999999999997 6799999
Q ss_pred CcHHHHHHhhc
Q 041196 79 WNFFIMQWSFF 89 (91)
Q Consensus 79 ~t~l~~a~~~~ 89 (91)
.|||++|+...
T Consensus 291 ~tpl~~A~~~~ 301 (471)
T PHA03095 291 NTPLSLMVRNN 301 (471)
T ss_pred CCHHHHHHHhC
Confidence 99999998653
No 23
>PHA02791 ankyrin-like protein; Provisional
Probab=99.76 E-value=1.1e-17 Score=95.30 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=49.3
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-C-chHHHHHHHhCHHHHHHHHHhcCcccccccC-CCCC
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-K-MTALHLAAARGLARANERIISLAAKCYELVD-DRGW 79 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~-~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~~ 79 (91)
|.+|..|+||||+|+..++.++++.|++.| ++++.++. | .||||+|+..|+.+++++|++.++.. .+ ..|.
T Consensus 88 n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~g---adin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~---~d~~~g~ 161 (284)
T PHA02791 88 SQFDDKGNTALYYAVDSGNMQTVKLFVKKN---WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILL 161 (284)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc---cccccCc
Confidence 455666677777777777777777777666 44444433 3 36677777767777776666655432 12 2356
Q ss_pred cHHHHHHhhc
Q 041196 80 NFFIMQWSFF 89 (91)
Q Consensus 80 t~l~~a~~~~ 89 (91)
||||+|++.+
T Consensus 162 TpLh~Aa~~g 171 (284)
T PHA02791 162 SCIHITIKNG 171 (284)
T ss_pred cHHHHHHHcC
Confidence 7777776654
No 24
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.75 E-value=1.2e-17 Score=105.97 Aligned_cols=84 Identities=21% Similarity=0.140 Sum_probs=67.6
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHH---------------------------
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAA--------------------------- 53 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~--------------------------- 53 (91)
+|..|..|.||||+|+..|+.++++.|+++| ++++.++. |.||||+|+.
T Consensus 551 ~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g---adin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~ 627 (823)
T PLN03192 551 PDIGDSKGRTPLHIAASKGYEDCVLVLLKHA---CNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLC 627 (823)
T ss_pred CCCCCCCCCCHHHHHHHcChHHHHHHHHhcC---CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHH
Confidence 5778899999999999999999999999999 66666665 8888775544
Q ss_pred ----hCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhhc
Q 041196 54 ----RGLARANERIISLAAKCYELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 54 ----~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 89 (91)
.|+.++++.|+++|+++ +.+|..|.||||+|++.+
T Consensus 628 ~Aa~~g~~~~v~~Ll~~Gadi-n~~d~~G~TpLh~A~~~g 666 (823)
T PLN03192 628 TAAKRNDLTAMKELLKQGLNV-DSEDHQGATALQVAMAED 666 (823)
T ss_pred HHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCC
Confidence 44555666677888886 678999999999998754
No 25
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.75 E-value=1.5e-18 Score=94.35 Aligned_cols=84 Identities=18% Similarity=0.262 Sum_probs=59.7
Q ss_pred CcccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 1 LIKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 1 ~~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
++|..|+.|.|||.||+.+|+++++++|++.|+++ +.-.+. ..++|.+|++.|..+++++|+..+.++ +.-|.+|.|
T Consensus 152 ~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp-~~lgk~-resALsLAt~ggytdiV~lLL~r~vdV-NvyDwNGgT 228 (296)
T KOG0502|consen 152 KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADP-DALGKY-RESALSLATRGGYTDIVELLLTREVDV-NVYDWNGGT 228 (296)
T ss_pred cccCccccCchHhHHHHhcCchHHHHHHHHcCCCh-hhhhhh-hhhhHhHHhcCChHHHHHHHHhcCCCc-ceeccCCCc
Confidence 47899999999999999999999999999999553 222232 356666666666666666666666665 445666666
Q ss_pred HHHHHHh
Q 041196 81 FFIMQWS 87 (91)
Q Consensus 81 ~l~~a~~ 87 (91)
||-+|++
T Consensus 229 pLlyAvr 235 (296)
T KOG0502|consen 229 PLLYAVR 235 (296)
T ss_pred eeeeeec
Confidence 6655544
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=99.75 E-value=1.5e-17 Score=99.93 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=58.8
Q ss_pred cccccCCCchHHHHHHHhC---CHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC-HHHHHHHHHhcCcccccccCC
Q 041196 2 IKETDQYGWALIHYAAYYN---QYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG-LARANERIISLAAKCYELVDD 76 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~-~~~~~~~l~~~~~~~~~~~~~ 76 (91)
+|.++..|.||||+|+..+ ..++++.|++.| ++++.++. |.||||+|+..+ ..+++++|++.|+++ +.++.
T Consensus 40 vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G---adin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~i-n~~~~ 115 (471)
T PHA03095 40 VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAG---ADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADV-NAKDK 115 (471)
T ss_pred cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCC-CCCCC
Confidence 4566777777777777776 777777777777 55665555 777777777777 477777777777775 56777
Q ss_pred CCCcHHHHHH
Q 041196 77 RGWNFFIMQW 86 (91)
Q Consensus 77 ~~~t~l~~a~ 86 (91)
.|.||||+|+
T Consensus 116 ~g~tpLh~a~ 125 (471)
T PHA03095 116 VGRTPLHVYL 125 (471)
T ss_pred CCCCHHHHHh
Confidence 7777777776
No 27
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.74 E-value=5.4e-17 Score=78.30 Aligned_cols=69 Identities=25% Similarity=0.194 Sum_probs=38.6
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhh
Q 041196 13 IHYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSF 88 (91)
Q Consensus 13 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 88 (91)
||+|+..++.++++.|++.+ .+++. |.+|+|+|+..|+.+++++|++.|+++ +.++..|+||||+|+..
T Consensus 1 L~~A~~~~~~~~~~~ll~~~---~~~~~---~~~~l~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG---ADINL---GNTALHYAAENGNLEIVKLLLENGADI-NSQDKNGNTALHYAAEN 69 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT---STTTS---SSBHHHHHHHTTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHHT
T ss_pred CHHHHHcCCHHHHHHHHHCc---CCCCC---CCCHHHHHHHcCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHHc
Confidence 45566666666666666655 23222 345666666666666666666666654 34555666666665553
No 28
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.73 E-value=3.3e-17 Score=98.71 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=64.0
Q ss_pred ccccCCCchHHHHHH--HhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC--HHHHHHHHHhcCcccccccCCC
Q 041196 3 KETDQYGWALIHYAA--YYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG--LARANERIISLAAKCYELVDDR 77 (91)
Q Consensus 3 n~~d~~g~t~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~ 77 (91)
+..|..|.||||+|+ ..++.++++.|++.| ++++..+. |.+|||+|+..+ +.+++++|++.|+++ ..++..
T Consensus 100 ~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~ 175 (480)
T PHA03100 100 NAPDNNGITPLLYAISKKSNSYSIVEYLLDNG---ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRY 175 (480)
T ss_pred CCCCCCCCchhhHHHhcccChHHHHHHHHHcC---CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCC
Confidence 566777888888888 888888888888888 55655555 788888888888 788888888888876 567778
Q ss_pred CCcHHHHHHhh
Q 041196 78 GWNFFIMQWSF 88 (91)
Q Consensus 78 ~~t~l~~a~~~ 88 (91)
|.||||+|+..
T Consensus 176 g~tpL~~A~~~ 186 (480)
T PHA03100 176 GYTPLHIAVEK 186 (480)
T ss_pred CCCHHHHHHHh
Confidence 88888888764
No 29
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.73 E-value=5.5e-17 Score=97.96 Aligned_cols=79 Identities=14% Similarity=0.088 Sum_probs=48.7
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHh-CHHHHHHHHHhcCcccccccCC-CCC
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAAR-GLARANERIISLAAKCYELVDD-RGW 79 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~-~~~~~~~~l~~~~~~~~~~~~~-~~~ 79 (91)
|..|..|.||||+|+..++.++++.|++.| ++++.++. |.||||+|+.. ++.+++++|++.|+++ +.++. .|.
T Consensus 195 n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g---a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv-n~~~~~~g~ 270 (477)
T PHA02878 195 NIPDKTNNSPLHHAVKHYNKPIVHILLENG---ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV-NAKSYILGL 270 (477)
T ss_pred CCcCCCCCCHHHHHHHhCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC-CccCCCCCC
Confidence 456666667777777666677777777666 45555554 66666666654 4566666666666665 33332 466
Q ss_pred cHHHHH
Q 041196 80 NFFIMQ 85 (91)
Q Consensus 80 t~l~~a 85 (91)
||||+|
T Consensus 271 TpLh~A 276 (477)
T PHA02878 271 TALHSS 276 (477)
T ss_pred CHHHHH
Confidence 666655
No 30
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.72 E-value=6.7e-17 Score=96.01 Aligned_cols=84 Identities=14% Similarity=0.132 Sum_probs=70.1
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCC-C
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRG-W 79 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-~ 79 (91)
++.++..|.||||+|+..|+.+.++.|++.| ++++.++. |.||||+|+..|+.+++++|++.|+++ ...+..| .
T Consensus 128 ~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g---~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~-n~~~~~~~~ 203 (413)
T PHA02875 128 PDIPNTDKFSPLHLAVMMGDIKGIELLIDHK---ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI-DYFGKNGCV 203 (413)
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CcCCCCCCc
Confidence 3567888999999999999999999999999 66666666 899999999999999999999999997 4566655 5
Q ss_pred cHHHHHHhhc
Q 041196 80 NFFIMQWSFF 89 (91)
Q Consensus 80 t~l~~a~~~~ 89 (91)
||+++|+...
T Consensus 204 t~l~~A~~~~ 213 (413)
T PHA02875 204 AALCYAIENN 213 (413)
T ss_pred hHHHHHHHcC
Confidence 7888787643
No 31
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.72 E-value=4.9e-17 Score=101.80 Aligned_cols=45 Identities=11% Similarity=0.032 Sum_probs=22.9
Q ss_pred ccccCCCchHHHHHHHhCC--HHHHHHHHhcCCCCCCcccCCC-CchHHHH
Q 041196 3 KETDQYGWALIHYAAYYNQ--YQQIYVLLEIDPTASNIVDKDR-KMTALHL 50 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~ 50 (91)
|.+|..|.||||+|+..|+ .++++.|++.| ++++.++. |.||||+
T Consensus 206 N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~G---ADVN~kD~~G~TPLh~ 253 (764)
T PHA02716 206 NLQNNHLITPLHTYLITGNVCASVIKKIIELG---GDMDMKCVNGMSPIMT 253 (764)
T ss_pred CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcC---CCCCCCCCCCCCHHHH
Confidence 4455555555555555553 25555555555 44444443 5555553
No 32
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.72 E-value=6.4e-17 Score=97.50 Aligned_cols=81 Identities=21% Similarity=0.267 Sum_probs=43.3
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-C------chHHHHHHHhCH--HHHHHHHHhcCcccccc
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-K------MTALHLAAARGL--ARANERIISLAAKCYEL 73 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~------~~~l~~a~~~~~--~~~~~~l~~~~~~~~~~ 73 (91)
|.+|..|.||||+|+..|+.++++.|++.| ++++..+. + .+|+|+|+..+. .+++++|++.|+++ +.
T Consensus 170 n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g---a~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di-n~ 245 (480)
T PHA03100 170 NAKNRYGYTPLHIAVEKGNIDVIKFLLDNG---ADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI-NI 245 (480)
T ss_pred ccccCCCCCHHHHHHHhCCHHHHHHHHHcC---CCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC-CC
Confidence 445566666666666666666666666666 33333322 2 445555555554 55555555555543 34
Q ss_pred cCCCCCcHHHHHHh
Q 041196 74 VDDRGWNFFIMQWS 87 (91)
Q Consensus 74 ~~~~~~t~l~~a~~ 87 (91)
++..|.||||+|+.
T Consensus 246 ~d~~g~TpL~~A~~ 259 (480)
T PHA03100 246 KDVYGFTPLHYAVY 259 (480)
T ss_pred CCCCCCCHHHHHHH
Confidence 45555555555544
No 33
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.72 E-value=5.1e-17 Score=71.79 Aligned_cols=53 Identities=28% Similarity=0.377 Sum_probs=43.5
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHH
Q 041196 9 GWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERII 64 (91)
Q Consensus 9 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~ 64 (91)
|.||||+|+..|+.+++++|++.+ .+++..+. |.||+|+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~---~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG---ADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT---SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999999 67777776 999999999999999999885
No 34
>PHA02798 ankyrin-like protein; Provisional
Probab=99.72 E-value=6.4e-17 Score=97.94 Aligned_cols=83 Identities=16% Similarity=0.122 Sum_probs=54.9
Q ss_pred cccccCCCchHHHHHHHh-----CCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC---HHHHHHHHHhcCccccc
Q 041196 2 IKETDQYGWALIHYAAYY-----NQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG---LARANERIISLAAKCYE 72 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~-----~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~---~~~~~~~l~~~~~~~~~ 72 (91)
+|.+|..|.||||.++.+ +..+++++|++.| ++++.++. |.||||+|+..+ +.+++++|++.|+++ .
T Consensus 64 vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G---adiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n 139 (489)
T PHA02798 64 VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENG---ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT-T 139 (489)
T ss_pred CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCC---CCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-c
Confidence 456667777777776543 4467777777777 55555555 677777776654 566777777777775 4
Q ss_pred ccCCCCCcHHHHHHhh
Q 041196 73 LVDDRGWNFFIMQWSF 88 (91)
Q Consensus 73 ~~~~~~~t~l~~a~~~ 88 (91)
.++..|.||||+|++.
T Consensus 140 ~~d~~g~tpL~~a~~~ 155 (489)
T PHA02798 140 LLDKDGFTMLQVYLQS 155 (489)
T ss_pred ccCCCCCcHHHHHHHc
Confidence 5677777777766654
No 35
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.2e-16 Score=99.78 Aligned_cols=82 Identities=22% Similarity=0.157 Sum_probs=55.3
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCH-HHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGL-ARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
+|.+|..|.||||+|+..++.++++.|++.| ++++..+. |.||||+|+..+. ..++++|++.|+++ +.+|..|.
T Consensus 368 in~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~g---ad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadi-n~~d~~G~ 443 (682)
T PHA02876 368 VNARDYCDKTPIHYAAVRNNVVIINTLLDYG---ADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANV-NSKNKDLS 443 (682)
T ss_pred CccCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCC-CcCCCCCC
Confidence 4677888888888888888888888888887 44444443 5666666655443 34556666666665 45666666
Q ss_pred cHHHHHHh
Q 041196 80 NFFIMQWS 87 (91)
Q Consensus 80 t~l~~a~~ 87 (91)
||||+|++
T Consensus 444 TpLh~Aa~ 451 (682)
T PHA02876 444 TPLHYACK 451 (682)
T ss_pred hHHHHHHH
Confidence 66666665
No 36
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.71 E-value=7.6e-17 Score=77.06 Aligned_cols=74 Identities=27% Similarity=0.324 Sum_probs=66.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 85 (91)
.|++|||+|+-.|+.+++++|+..| ++++.++. |-|||..|...|+.+|+++|+++|++. ..+...|.+.+..+
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iG---A~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdr-t~~~PdG~~~~eat 107 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIG---ANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADR-TIHAPDGTALIEAT 107 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhc---cccCCccccCCcHHHHHHHHhhHHHHHHHHHcCccc-ceeCCCchhHHhhc
Confidence 6899999999999999999999999 88888887 999999999999999999999999994 56777777776543
No 37
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.71 E-value=2.1e-16 Score=90.50 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=68.4
Q ss_pred cccccCCCchH-HHHHHHhCCHHHHHHHHhcCCCCCCcccC----CC-CchHHHHHHHhCHHHHHHHHHhcCccccccc-
Q 041196 2 IKETDQYGWAL-IHYAAYYNQYQQIYVLLEIDPTASNIVDK----DR-KMTALHLAAARGLARANERIISLAAKCYELV- 74 (91)
Q Consensus 2 ~n~~d~~g~t~-l~~a~~~~~~~~~~~ll~~~~~~~~~~~~----~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~- 74 (91)
+..+|..|+|+ ||.|+..++.++++.|++.| ++++.. +. |.||||+|+..++.+++++|+++|+++ +.+
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~G---AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV-N~~~ 100 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLG---ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV-NRYA 100 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCC---CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-Cccc
Confidence 34678888865 45566778999999999999 555554 23 899999999999999999999999997 554
Q ss_pred CCCCCcHHHHHHhhc
Q 041196 75 DDRGWNFFIMQWSFF 89 (91)
Q Consensus 75 ~~~~~t~l~~a~~~~ 89 (91)
+..|.||||+|+...
T Consensus 101 ~~~g~TpLh~Aa~~~ 115 (300)
T PHA02884 101 EEAKITPLYISVLHG 115 (300)
T ss_pred CCCCCCHHHHHHHcC
Confidence 467999999998653
No 38
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.70 E-value=8.4e-18 Score=96.75 Aligned_cols=76 Identities=18% Similarity=0.197 Sum_probs=37.0
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhc-CcccccccCCCCCcHHHHH
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISL-AAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~~t~l~~a 85 (91)
.|+|+|+.|+.+|..++++.|+.+| ++++..+. |.|+|+.|+.+|+++++++|+.. .+++ ...|..|.|+|.+|
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacg---AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~-sLtD~DgSTAl~IA 414 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACG---ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDI-SLTDVDGSTALSIA 414 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHcc---CCCccccCCccHHHhhhhhhChHHHHHHHhccCcccc-eeecCCCchhhhhH
Confidence 3445555555555555555555555 34444443 55555555555555555554433 3332 34455555555554
Q ss_pred Hh
Q 041196 86 WS 87 (91)
Q Consensus 86 ~~ 87 (91)
..
T Consensus 415 le 416 (452)
T KOG0514|consen 415 LE 416 (452)
T ss_pred Hh
Confidence 43
No 39
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.70 E-value=1.8e-16 Score=99.36 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=71.0
Q ss_pred cccc-cCCCchHHHHHHH--hCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCH--HHHHHHHHhcCcccccccC
Q 041196 2 IKET-DQYGWALIHYAAY--YNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGL--ARANERIISLAAKCYELVD 75 (91)
Q Consensus 2 ~n~~-d~~g~t~l~~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~--~~~~~~l~~~~~~~~~~~~ 75 (91)
+|.+ |..|.||||+|+. +++.+++++|++.| ++++.++. |.||||+|+..|+ .+++++|++.|+++ +.++
T Consensus 169 IN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~G---ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADV-N~kD 244 (764)
T PHA02716 169 LNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNG---VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDM-DMKC 244 (764)
T ss_pred cccccCCCCCcHHHHHHHhccCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-CCCC
Confidence 4566 8899999999864 45789999999999 77787776 9999999999985 58999999999997 6799
Q ss_pred CCCCcHHHHHHh
Q 041196 76 DRGWNFFIMQWS 87 (91)
Q Consensus 76 ~~~~t~l~~a~~ 87 (91)
..|.||||.|+.
T Consensus 245 ~~G~TPLh~Ai~ 256 (764)
T PHA02716 245 VNGMSPIMTYII 256 (764)
T ss_pred CCCCCHHHHHHH
Confidence 999999998753
No 40
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.70 E-value=1.8e-16 Score=76.49 Aligned_cols=62 Identities=29% Similarity=0.385 Sum_probs=54.4
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCccccccc
Q 041196 9 GWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELV 74 (91)
Q Consensus 9 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 74 (91)
|.||||+|+..|+.+++++|++.| ++++.++. |.||||+|+..++.+++++|++.|+++ ..+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~ 88 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENG---ADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADV-NIR 88 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTT---TCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-T-TSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhc---ccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCc
Confidence 789999999999999999999999 67766665 899999999999999999999999986 444
No 41
>PHA02795 ankyrin-like protein; Provisional
Probab=99.70 E-value=1.2e-16 Score=94.90 Aligned_cols=78 Identities=12% Similarity=-0.015 Sum_probs=70.1
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQW 86 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 86 (91)
.+.+++|.|...++.++++.|+++| ++++.++. |.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+
T Consensus 187 ~~~t~l~~a~~~~~~eIve~LIs~G---ADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI-N~~d~~G~TpLh~Aa 262 (437)
T PHA02795 187 IQYTRGFLVDEPTVLEIYKLCIPYI---EDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV-NAVMSNGYTCLDVAV 262 (437)
T ss_pred hccchhHHHHhcCHHHHHHHHHhCc---CCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHH
Confidence 4678888888889999999999999 77787777 999999999999999999999999997 679999999999998
Q ss_pred hhc
Q 041196 87 SFF 89 (91)
Q Consensus 87 ~~~ 89 (91)
..+
T Consensus 263 ~~g 265 (437)
T PHA02795 263 DRG 265 (437)
T ss_pred HcC
Confidence 764
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.70 E-value=1.6e-16 Score=98.25 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=69.2
Q ss_pred cccCCCchHHHHHHHhC---CHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC--HHHHHHHHHhcCccc-ccccCC
Q 041196 4 ETDQYGWALIHYAAYYN---QYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG--LARANERIISLAAKC-YELVDD 76 (91)
Q Consensus 4 ~~d~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~--~~~~~~~l~~~~~~~-~~~~~~ 76 (91)
.+|..|+||||+|+..+ +.+++++|+++| ++++.++. |.||||+|+..+ +.+++++|++.|+.. .+..+.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~G---Adin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~ 112 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRG---VERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSN 112 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCC---CCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccc
Confidence 78899999999999987 599999999999 88888887 999999999866 799999999996542 144677
Q ss_pred CCCcHHHHHHh
Q 041196 77 RGWNFFIMQWS 87 (91)
Q Consensus 77 ~~~t~l~~a~~ 87 (91)
.+.+||+.++.
T Consensus 113 ~~d~~l~~y~~ 123 (672)
T PHA02730 113 INDFDLYSYMS 123 (672)
T ss_pred cCCchHHHHHH
Confidence 78999987765
No 43
>PHA02946 ankyin-like protein; Provisional
Probab=99.70 E-value=1.7e-16 Score=95.31 Aligned_cols=82 Identities=12% Similarity=0.152 Sum_probs=63.1
Q ss_pred cccccCCCchHHHHHHHhC--CHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC--HHHHHHHHHhcCcccccccCC
Q 041196 2 IKETDQYGWALIHYAAYYN--QYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG--LARANERIISLAAKCYELVDD 76 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~ 76 (91)
++.+|..|+||||+|+..+ +.+++++|++.| ++++.++. |.||||+|+..+ +.+++++|+. ++++ +.++.
T Consensus 166 ~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~G---adin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadi-n~~d~ 240 (446)
T PHA02946 166 ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLG---ISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDV-NKQNK 240 (446)
T ss_pred ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCC-CCCCC
Confidence 4667888888888877654 467888888888 66776665 888888888875 6778887774 7776 57888
Q ss_pred CCCcHHHHHHhh
Q 041196 77 RGWNFFIMQWSF 88 (91)
Q Consensus 77 ~~~t~l~~a~~~ 88 (91)
.|.||||+|++.
T Consensus 241 ~G~TpLh~A~~~ 252 (446)
T PHA02946 241 FGDSPLTLLIKT 252 (446)
T ss_pred CCCCHHHHHHHh
Confidence 888888888764
No 44
>PHA02798 ankyrin-like protein; Provisional
Probab=99.68 E-value=4.4e-16 Score=94.36 Aligned_cols=83 Identities=7% Similarity=0.112 Sum_probs=72.1
Q ss_pred cccccCCCchHHHHHHHhC---CHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCH---HHHHHHHHhcCccccccc
Q 041196 2 IKETDQYGWALIHYAAYYN---QYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGL---ARANERIISLAAKCYELV 74 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~---~~~~~~l~~~~~~~~~~~ 74 (91)
+|.+|..|.||||+|+..+ +.+++++|++.| ++++..+. |.||||+++..++ .+++++|++.|+++ +.+
T Consensus 102 iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G---advn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi-n~~ 177 (489)
T PHA02798 102 INKKNSDGETPLYCLLSNGYINNLEILLFMIENG---ADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI-NTH 177 (489)
T ss_pred CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcC---CCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCc-ccc
Confidence 5789999999999999875 789999999999 77777776 9999999999887 89999999999997 445
Q ss_pred -CCCCCcHHHHHHhh
Q 041196 75 -DDRGWNFFIMQWSF 88 (91)
Q Consensus 75 -~~~~~t~l~~a~~~ 88 (91)
+..|.||||.+.+.
T Consensus 178 ~~~~~~t~Lh~~~~~ 192 (489)
T PHA02798 178 NNKEKYDTLHCYFKY 192 (489)
T ss_pred cCcCCCcHHHHHHHh
Confidence 56789999987654
No 45
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.68 E-value=3.1e-16 Score=83.50 Aligned_cols=83 Identities=12% Similarity=0.005 Sum_probs=67.8
Q ss_pred ccccCCCchHHHHHHHhCCH----HHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHH---HHHHHHhcCccccccc
Q 041196 3 KETDQYGWALIHYAAYYNQY----QQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLAR---ANERIISLAAKCYELV 74 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~---~~~~l~~~~~~~~~~~ 74 (91)
+..+.++.+++|.|++.|+. ++++.|++.+ ..++.++. |.||||+|+..+..+ ++++|+..|+++ +.+
T Consensus 14 ~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g---~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi-n~~ 89 (166)
T PHA02743 14 VEIDEDEQNTFLRICRTGNIYELMEVAPFISGDG---HLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI-NAR 89 (166)
T ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc---hhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC-CCC
Confidence 45677888999999999997 5566777888 66666666 999999999998765 478999999997 567
Q ss_pred C-CCCCcHHHHHHhhc
Q 041196 75 D-DRGWNFFIMQWSFF 89 (91)
Q Consensus 75 ~-~~~~t~l~~a~~~~ 89 (91)
+ ..|.||||+|+...
T Consensus 90 d~~~g~TpLh~A~~~g 105 (166)
T PHA02743 90 ELGTGNTLLHIAASTK 105 (166)
T ss_pred CCCCCCcHHHHHHHhC
Confidence 7 58999999998753
No 46
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.68 E-value=1.1e-16 Score=71.13 Aligned_cols=48 Identities=21% Similarity=0.218 Sum_probs=23.0
Q ss_pred CcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 041196 37 NIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 37 ~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 85 (91)
+++..+. |.||||+|+..|+.+++++|+..|+++ ..+|..|+|||++|
T Consensus 8 ~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~-~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 8 DVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADP-NAKDKDGQTPLHYA 56 (56)
T ss_dssp -TT---TTS--HHHHHHHHT-HHHHHHHHHCT--T-T---TTS--HHHH-
T ss_pred CCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCC-CCCcCCCCCHHHhC
Confidence 4444444 677777777777777777777667775 56777777777765
No 47
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.67 E-value=2.3e-16 Score=97.93 Aligned_cols=87 Identities=23% Similarity=0.308 Sum_probs=73.3
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCccccc--ccCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYE--LVDDRG 78 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~~~~~ 78 (91)
++.++.++.||||.|+++|+..+++.|++ ..+...++..+. |.||+|+|+..|+.++++.|+..|+...+ ..|..|
T Consensus 299 I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg 377 (929)
T KOG0510|consen 299 INSKNKDEESPLHFAAIYGRINTVERLLQ-ESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDG 377 (929)
T ss_pred ccccCCCCCCchHHHHHcccHHHHHHHHh-CcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCC
Confidence 57889999999999999999999999999 222244555665 99999999999999999999999998643 348999
Q ss_pred CcHHHHHHhhc
Q 041196 79 WNFFIMQWSFF 89 (91)
Q Consensus 79 ~t~l~~a~~~~ 89 (91)
.||||.|+.++
T Consensus 378 ~TaLH~Aa~~g 388 (929)
T KOG0510|consen 378 NTALHLAAKYG 388 (929)
T ss_pred chhhhHHHHhc
Confidence 99999999875
No 48
>PHA02917 ankyrin-like protein; Provisional
Probab=99.66 E-value=1.1e-15 Score=95.27 Aligned_cols=81 Identities=15% Similarity=0.087 Sum_probs=70.6
Q ss_pred ccccCCCchHHHHHHHhC-----------------------CHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHH
Q 041196 3 KETDQYGWALIHYAAYYN-----------------------QYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLAR 58 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~-----------------------~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~ 58 (91)
+.++.+|+||||.|++.+ ..++++.|+++| ++++.++. |.||||+|+..++.+
T Consensus 390 ~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~G---AdIN~kd~~G~TpLh~Aa~~~~~~ 466 (661)
T PHA02917 390 VNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYL---KDINMIDKRGETLLHKAVRYNKQS 466 (661)
T ss_pred cccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCC---CCCCCCCCCCcCHHHHHHHcCCHH
Confidence 456778999999987532 356789999999 78888887 999999999999999
Q ss_pred HHHHHHhcCcccccccCCCCCcHHHHHHh
Q 041196 59 ANERIISLAAKCYELVDDRGWNFFIMQWS 87 (91)
Q Consensus 59 ~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 87 (91)
++++|++.|+++ ..++..|.|||++|+.
T Consensus 467 ~v~~Ll~~GAdi-n~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 467 LVSLLLESGSDV-NIRSNNGYTCIAIAIN 494 (661)
T ss_pred HHHHHHHCcCCC-CCCCCCCCCHHHHHHH
Confidence 999999999997 6799999999999984
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.65 E-value=1.1e-15 Score=95.28 Aligned_cols=84 Identities=13% Similarity=0.005 Sum_probs=69.2
Q ss_pred cccccCCCchHHHHHH--HhCCHHHHHHHHhcCCCCCCcccCC---C-C-----------chHHHHHHH-----------
Q 041196 2 IKETDQYGWALIHYAA--YYNQYQQIYVLLEIDPTASNIVDKD---R-K-----------MTALHLAAA----------- 53 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~---~-~-----------~~~l~~a~~----------- 53 (91)
+|.+|..|.||||.++ ..++.+++++|+++| ++++.++ . | .||||+|+.
T Consensus 129 in~~d~~g~T~L~~~~a~~~~~~eivklLi~~G---a~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~ 205 (661)
T PHA02917 129 LSVKCENHRSVIENYVMTDDPVPEIIDLFIENG---CSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRA 205 (661)
T ss_pred CCccCCCCccHHHHHHHccCCCHHHHHHHHHcC---CCccccccccccccccccccccccccHHHHHHhhcccccccccc
Confidence 5789999999999653 578999999999999 5554222 1 3 599999976
Q ss_pred hCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhhc
Q 041196 54 RGLARANERIISLAAKCYELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 54 ~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 89 (91)
.++.+++++|++.|+++ +.++..|.||||+|++..
T Consensus 206 ~~~~eiv~~Li~~Gadv-n~~d~~G~TpLh~A~~~g 240 (661)
T PHA02917 206 YVRPEVVKCLINHGIKP-SSIDKNYCTALQYYIKSS 240 (661)
T ss_pred cCcHHHHHHHHHCCCCc-ccCCCCCCcHHHHHHHcC
Confidence 45789999999999997 679999999999998754
No 50
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.65 E-value=1.4e-15 Score=92.25 Aligned_cols=45 Identities=13% Similarity=0.037 Sum_probs=37.6
Q ss_pred CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhhc
Q 041196 44 KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 44 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 89 (91)
|.||||+|+..++.+++++|++.|+++ +.++..|.|||++|++..
T Consensus 256 G~TpL~~Aa~~~~~~~v~~LL~~Gadi-n~~d~~G~TpL~~A~~~~ 300 (494)
T PHA02989 256 GFNPLLISAKVDNYEAFNYLLKLGDDI-YNVSKDGDTVLTYAIKHG 300 (494)
T ss_pred CCCHHHHHHHhcCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcC
Confidence 788888888888888888888888886 578888888888887653
No 51
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.65 E-value=1.7e-15 Score=91.98 Aligned_cols=84 Identities=17% Similarity=0.112 Sum_probs=65.5
Q ss_pred cccccCCCchHHHHHHHh---CCHHHHHHHHhcCCCCCCc-ccCCC-CchHHHHHHHh--CHHHHHHHHHhcCccccccc
Q 041196 2 IKETDQYGWALIHYAAYY---NQYQQIYVLLEIDPTASNI-VDKDR-KMTALHLAAAR--GLARANERIISLAAKCYELV 74 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~-~~~~~-~~~~l~~a~~~--~~~~~~~~l~~~~~~~~~~~ 74 (91)
+|.+|..|.||||.|+.. ++.+++++|++.| +++ +.++. |.||||+++.. ++.+++++|++.|+++....
T Consensus 101 in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G---adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~ 177 (494)
T PHA02989 101 INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG---INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKT 177 (494)
T ss_pred CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC---CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc
Confidence 577888899999987755 5788999999999 677 55555 88999987654 57889999999998863325
Q ss_pred CCCCCcHHHHHHhh
Q 041196 75 DDRGWNFFIMQWSF 88 (91)
Q Consensus 75 ~~~~~t~l~~a~~~ 88 (91)
+..|.|||+++++.
T Consensus 178 ~~~g~tpL~~a~~~ 191 (494)
T PHA02989 178 SLYGLTPMNIYLRN 191 (494)
T ss_pred cccCCChHHHHHhc
Confidence 77889999887654
No 52
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.65 E-value=4e-16 Score=69.37 Aligned_cols=47 Identities=32% Similarity=0.531 Sum_probs=31.0
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHH
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLA 51 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a 51 (91)
+|.+|..|.||||+|+..|+.+++++|+..| ++++.++. |.||+++|
T Consensus 9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g---~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQNG---ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TT---TTS--HHHHHHHHT-HHHHHHHHHCT-----TT---TTS--HHHH-
T ss_pred CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc---CCCCCCcCCCCCHHHhC
Confidence 6789999999999999999999999999999 77777877 99999986
No 53
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.65 E-value=4.5e-15 Score=74.78 Aligned_cols=81 Identities=25% Similarity=0.274 Sum_probs=62.9
Q ss_pred cccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHH
Q 041196 4 ETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 82 (91)
Q Consensus 4 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 82 (91)
.+|.+|.||||+|+..++.+.++.|++.+ .+....+. |.+|+++++..+..+++++|+..++.+ ...+..+.||+
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~---~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~l 77 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENG---ADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV-NARDKDGNTPL 77 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcC---CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHH
Confidence 45678888888888888888888888888 44344444 778888888888888888888887765 45677888888
Q ss_pred HHHHhh
Q 041196 83 IMQWSF 88 (91)
Q Consensus 83 ~~a~~~ 88 (91)
|+|++.
T Consensus 78 ~~a~~~ 83 (126)
T cd00204 78 HLAARN 83 (126)
T ss_pred HHHHHc
Confidence 887765
No 54
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.64 E-value=2.8e-15 Score=93.82 Aligned_cols=81 Identities=19% Similarity=0.226 Sum_probs=49.3
Q ss_pred ccccCCCchHHHHHHHh-CCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 3 KETDQYGWALIHYAAYY-NQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
|..|..|.||||+|+.. ++.++++.|++.| ++++.++. |.||||+|+..++.+++++|++.|+++ ...+..|.|
T Consensus 335 n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~g---adin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~-~~~~~~g~T 410 (682)
T PHA02876 335 NAADRLYITPLHQASTLDRNKDIVITLLELG---ANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADI-EALSQKIGT 410 (682)
T ss_pred CCcccCCCcHHHHHHHhCCcHHHHHHHHHcC---CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-cccCCCCCc
Confidence 34455555555555543 2455556666666 45555554 667777777777777777777777665 456666677
Q ss_pred HHHHHHh
Q 041196 81 FFIMQWS 87 (91)
Q Consensus 81 ~l~~a~~ 87 (91)
|||+|+.
T Consensus 411 ~Lh~A~~ 417 (682)
T PHA02876 411 ALHFALC 417 (682)
T ss_pred hHHHHHH
Confidence 7776653
No 55
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.63 E-value=2.6e-16 Score=93.27 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=45.1
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 85 (91)
.-..|||..||.-|+++++++|+++| ++++..++ |.|.|++|+.+|+.+++++|++.|+++ +.++..|.|+||.+
T Consensus 115 ~TNStPLraACfDG~leivKyLvE~g---ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADv-n~ks~kGNTALH~c 190 (615)
T KOG0508|consen 115 RTNSTPLRAACFDGHLEIVKYLVEHG---ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADV-NAKSYKGNTALHDC 190 (615)
T ss_pred ccCCccHHHHHhcchhHHHHHHHHcC---CCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCc-chhcccCchHHHhh
Confidence 33446666666666666666666666 44444444 566666666666666666666666665 44566666666655
Q ss_pred H
Q 041196 86 W 86 (91)
Q Consensus 86 ~ 86 (91)
+
T Consensus 191 a 191 (615)
T KOG0508|consen 191 A 191 (615)
T ss_pred h
Confidence 5
No 56
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.63 E-value=8.1e-16 Score=86.94 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=73.5
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
+|..+....||||.|+.+|+.++++.|++.. ++++...+ |.+|||||+..|...+.+-|+..|+.+ ..+++.|.|
T Consensus 60 vn~tnmgddtplhlaaahghrdivqkll~~k---advnavnehgntplhyacfwgydqiaedli~~ga~v-~icnk~g~t 135 (448)
T KOG0195|consen 60 VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRK---ADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAV-NICNKKGMT 135 (448)
T ss_pred cccccCCCCcchhhhhhcccHHHHHHHHHHh---cccchhhccCCCchhhhhhhcHHHHHHHHHhcccee-eecccCCCC
Confidence 5677778889999999999999999999999 77787777 999999999999999999999999997 689999999
Q ss_pred HHHHHH
Q 041196 81 FFIMQW 86 (91)
Q Consensus 81 ~l~~a~ 86 (91)
||..|.
T Consensus 136 pldkak 141 (448)
T KOG0195|consen 136 PLDKAK 141 (448)
T ss_pred chhhhc
Confidence 997653
No 57
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.63 E-value=3.7e-15 Score=94.85 Aligned_cols=79 Identities=18% Similarity=0.061 Sum_probs=71.3
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 85 (91)
..+.++|+.|+..|+.+.++.|++.| ++++..+. |.||||+|+..|+.+++++|++.|+++ +.+|..|.||||.|
T Consensus 523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G---~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A 598 (823)
T PLN03192 523 PNMASNLLTVASTGNAALLEELLKAK---LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNA 598 (823)
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHH
Confidence 35679999999999999999999999 67777776 999999999999999999999999997 67899999999999
Q ss_pred Hhhc
Q 041196 86 WSFF 89 (91)
Q Consensus 86 ~~~~ 89 (91)
+...
T Consensus 599 ~~~g 602 (823)
T PLN03192 599 ISAK 602 (823)
T ss_pred HHhC
Confidence 8753
No 58
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.63 E-value=4.2e-16 Score=92.45 Aligned_cols=84 Identities=21% Similarity=0.185 Sum_probs=76.2
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
.+..|+.|.|.|++||..|+.+++++|++.| ++++.++. |.|+||.++..|+.+++++|+..|+.+ .+|..|-|
T Consensus 143 ~~IanrhGhTcLmIa~ykGh~~I~qyLle~g---ADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i--~~d~~Gmt 217 (615)
T KOG0508|consen 143 PEIANRHGHTCLMIACYKGHVDIAQYLLEQG---ADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKI--DVDGHGMT 217 (615)
T ss_pred CcccccCCCeeEEeeeccCchHHHHHHHHhC---CCcchhcccCchHHHhhhhcccHHHHHHHHhCCcee--eecCCCCc
Confidence 4678899999999999999999999999999 88888887 999999999999999999999999986 47888999
Q ss_pred HHHHHHhhcc
Q 041196 81 FFIMQWSFFF 90 (91)
Q Consensus 81 ~l~~a~~~~~ 90 (91)
||-.|+.-++
T Consensus 218 PL~~Aa~tG~ 227 (615)
T KOG0508|consen 218 PLLLAAVTGH 227 (615)
T ss_pred hHHHHhhhcc
Confidence 9998876544
No 59
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.62 E-value=2.6e-15 Score=94.73 Aligned_cols=78 Identities=21% Similarity=0.184 Sum_probs=68.4
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccC------------C--C-CchHHHHHHHhCHHHHHHHHHhcCcccc
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDK------------D--R-KMTALHLAAARGLARANERIISLAAKCY 71 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~------------~--~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~ 71 (91)
..|.||||+|+..++.++++.|++.| ++++.+ + . |.+|+|+|+..++.+++++|++.|+++
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~G---Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi- 201 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERG---ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI- 201 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCC---CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch-
Confidence 46999999999999999999999999 444432 1 2 789999999999999999999999997
Q ss_pred cccCCCCCcHHHHHHhh
Q 041196 72 ELVDDRGWNFFIMQWSF 88 (91)
Q Consensus 72 ~~~~~~~~t~l~~a~~~ 88 (91)
+.+|..|+||||+|+..
T Consensus 202 n~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 202 LTADSLGNTLLHLLVME 218 (743)
T ss_pred hhHhhhhhHHHHHHHhh
Confidence 67899999999999875
No 60
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=1.2e-14 Score=83.96 Aligned_cols=83 Identities=18% Similarity=0.254 Sum_probs=74.5
Q ss_pred cccccCCCchHHHHHHHh-----CCHHHHHHHHhcCCCCCCcccCCC--CchHHHHHHHhCHHHHHHHHHhcCccccccc
Q 041196 2 IKETDQYGWALIHYAAYY-----NQYQQIYVLLEIDPTASNIVDKDR--KMTALHLAAARGLARANERIISLAAKCYELV 74 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~-----~~~~~~~~ll~~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 74 (91)
+|.+++-|+||++.++.. ...++|+.|+..| +++.+-+ |.|+|++|..+|+.++++.|+..|+++ +.+
T Consensus 295 VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg----nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdV-NiQ 369 (452)
T KOG0514|consen 295 VDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG----DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADV-NIQ 369 (452)
T ss_pred ccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc----CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCC-ccc
Confidence 678999999999998754 4578899999997 7777765 999999999999999999999999998 689
Q ss_pred CCCCCcHHHHHHhhc
Q 041196 75 DDRGWNFFIMQWSFF 89 (91)
Q Consensus 75 ~~~~~t~l~~a~~~~ 89 (91)
|..|.|+|..|++++
T Consensus 370 DdDGSTALMCA~EHG 384 (452)
T KOG0514|consen 370 DDDGSTALMCAAEHG 384 (452)
T ss_pred cCCccHHHhhhhhhC
Confidence 999999999999885
No 61
>PHA02795 ankyrin-like protein; Provisional
Probab=99.58 E-value=1.3e-14 Score=86.40 Aligned_cols=66 Identities=24% Similarity=0.233 Sum_probs=60.5
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC--------HHHHHHHHHhcCccc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG--------LARANERIISLAAKC 70 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~--------~~~~~~~l~~~~~~~ 70 (91)
+|.+|..|.||||+|+..|+.+++++|++.| ++++.++. |.||||+|+..| +.+++++|++.|+++
T Consensus 214 IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G---AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 214 INQLDAGGRTLLYRAIYAGYIDLVSWLLENG---ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSI 288 (437)
T ss_pred cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCC
Confidence 6889999999999999999999999999999 77777777 999999999988 468999999998876
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.57 E-value=2.2e-14 Score=75.46 Aligned_cols=66 Identities=21% Similarity=0.242 Sum_probs=58.1
Q ss_pred ccccc-CCCchHHHHHHHhCCHHHHHHHHhc-CCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCccc
Q 041196 2 IKETD-QYGWALIHYAAYYNQYQQIYVLLEI-DPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKC 70 (91)
Q Consensus 2 ~n~~d-~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~ 70 (91)
+|.+| ..|+||||+|+..++.+++++|+.. + ++++.++. |.||||+|+..++.+++++|+..|++.
T Consensus 84 in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g---~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 84 INGKERVFGNTPLHIAVYTQNYELATWLCNQPG---VNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCC---CCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 46677 4899999999999999999999984 7 66666666 999999999999999999999998874
No 63
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.57 E-value=2.3e-14 Score=78.46 Aligned_cols=87 Identities=22% Similarity=0.112 Sum_probs=73.3
Q ss_pred cccccCCCchHHHHHHHhCC-----HHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccC
Q 041196 2 IKETDQYGWALIHYAAYYNQ-----YQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVD 75 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~-----~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 75 (91)
++.+|..|.||||+|+..++ .++++.|++.|++.......+. |.||+|+|+..|+.+++..+++.++++ ...+
T Consensus 99 ~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~-~~~~ 177 (235)
T COG0666 99 VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADP-NSRN 177 (235)
T ss_pred cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCC-cccc
Confidence 37889999999999999999 9999999999941003344455 899999999999999999999999996 5678
Q ss_pred CCCCcHHHHHHhhc
Q 041196 76 DRGWNFFIMQWSFF 89 (91)
Q Consensus 76 ~~~~t~l~~a~~~~ 89 (91)
..|.|+++.|+...
T Consensus 178 ~~g~t~l~~a~~~~ 191 (235)
T COG0666 178 SYGVTALDPAAKNG 191 (235)
T ss_pred cCCCcchhhhcccc
Confidence 99999999987653
No 64
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.56 E-value=2.3e-14 Score=89.62 Aligned_cols=71 Identities=20% Similarity=0.170 Sum_probs=33.0
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 041196 13 IHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWS 87 (91)
Q Consensus 13 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 87 (91)
|+.|+..|+.+.++.|++.| ++++..+. |.||||+|+..|+.+++++|++.|+++ +.+|..|.||||+|+.
T Consensus 86 L~~aa~~G~~~~vk~LL~~G---adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv-n~~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGG---ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 44444444444444444444 33333333 444444444444444444444444443 3444444444444443
No 65
>PHA02792 ankyrin-like protein; Provisional
Probab=99.56 E-value=3.7e-14 Score=87.42 Aligned_cols=82 Identities=11% Similarity=-0.005 Sum_probs=68.9
Q ss_pred cccccCCC--chHHHHHHHhCCH---HHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccC
Q 041196 2 IKETDQYG--WALIHYAAYYNQY---QQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVD 75 (91)
Q Consensus 2 ~n~~d~~g--~t~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 75 (91)
+|.+|..| .||||+|+..... +.++.|+++| ++++.++. |.||||+|+..++.+++++|+++|+++ +.++
T Consensus 365 IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G---ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADI-N~kD 440 (631)
T PHA02792 365 VVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI---DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADI-NITT 440 (631)
T ss_pred hhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC---CccccccccCcchHHHHHHcCCHHHHHHHHHCCCCC-CCcC
Confidence 35567664 6999987776554 4578889999 77888777 999999999999999999999999997 6799
Q ss_pred CCCCcHHHHHHh
Q 041196 76 DRGWNFFIMQWS 87 (91)
Q Consensus 76 ~~~~t~l~~a~~ 87 (91)
..|.|||++|+.
T Consensus 441 ~~G~TpL~~A~~ 452 (631)
T PHA02792 441 KYGSTCIGICVI 452 (631)
T ss_pred CCCCCHHHHHHH
Confidence 999999999865
No 66
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.54 E-value=6.1e-14 Score=87.74 Aligned_cols=81 Identities=21% Similarity=0.138 Sum_probs=70.8
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhc-------Ccccccc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISL-------AAKCYEL 73 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~-------~~~~~~~ 73 (91)
+|.+|..|.||||+|+..|+.+++++|++.| ++++.++. |.||||+|+..++.+++++|+.+ +++. ..
T Consensus 108 in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G---advn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~-~~ 183 (664)
T PTZ00322 108 PNCRDYDGRTPLHIACANGHVQVVRVLLEFG---ADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANA-KP 183 (664)
T ss_pred CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCC-Cc
Confidence 5788999999999999999999999999999 77777776 89999999999999999999988 7774 77
Q ss_pred cCCCCCcHHHHHH
Q 041196 74 VDDRGWNFFIMQW 86 (91)
Q Consensus 74 ~~~~~~t~l~~a~ 86 (91)
.+..|.+|+..+.
T Consensus 184 ~~~~g~~~~~~~~ 196 (664)
T PTZ00322 184 DSFTGKPPSLEDS 196 (664)
T ss_pred cccCCCCccchhh
Confidence 7778888876543
No 67
>PHA02730 ankyrin-like protein; Provisional
Probab=99.54 E-value=5.7e-14 Score=87.24 Aligned_cols=82 Identities=13% Similarity=0.024 Sum_probs=68.9
Q ss_pred cccccCCCchHHHH---HHHhC---------CHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCc
Q 041196 2 IKETDQYGWALIHY---AAYYN---------QYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAA 68 (91)
Q Consensus 2 ~n~~d~~g~t~l~~---a~~~~---------~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~ 68 (91)
+|.+|..|.||||. |...+ ..+++++|+++| ++++.++. |.||||+|+..++.+++++|++.|+
T Consensus 410 IN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~G---ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GA 486 (672)
T PHA02730 410 INHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYM---DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGA 486 (672)
T ss_pred ccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcc---cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCC
Confidence 57788999999984 33232 235689999999 88888887 9999999999999999999999999
Q ss_pred ccccccCC-CCCcHHHHHHh
Q 041196 69 KCYELVDD-RGWNFFIMQWS 87 (91)
Q Consensus 69 ~~~~~~~~-~~~t~l~~a~~ 87 (91)
++ +.++. .|.|||+.|+.
T Consensus 487 dI-N~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 487 SV-NTTSRSIINTAIQKSSY 505 (672)
T ss_pred CC-CCCCCcCCcCHHHHHHH
Confidence 97 57886 59999999875
No 68
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.52 E-value=3.4e-13 Score=67.88 Aligned_cols=82 Identities=23% Similarity=0.282 Sum_probs=71.6
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcH
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 81 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 81 (91)
+.++..|.+|+|.|+..+..++++.|+..+ ..++..+. +.+|+|+|+..++.+++++|+..+.+. ...+..+.||
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~---~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~-~~~~~~~~~~ 109 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKG---ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADV-NARDKDGRTP 109 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCH
Confidence 567889999999999999999999999999 55555555 889999999999999999999988775 5678999999
Q ss_pred HHHHHhh
Q 041196 82 FIMQWSF 88 (91)
Q Consensus 82 l~~a~~~ 88 (91)
++.|...
T Consensus 110 l~~~~~~ 116 (126)
T cd00204 110 LHLAAKN 116 (126)
T ss_pred HHHHHhc
Confidence 9998764
No 69
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.52 E-value=8.6e-14 Score=78.65 Aligned_cols=82 Identities=24% Similarity=0.312 Sum_probs=73.7
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC--CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR--KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
+|..|..|.++|..|+..|+++.++.|++.| ++++.+.. +.||||.|+..|+.++.++|++.|+.. ...+.-|+
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~~g---aDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~-~~vNsvgr 113 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLELG---ADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARM-YLVNSVGR 113 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHHhC---CCcCcccccccccHHHHHHHcCCchHHHHHHhccCcc-ccccchhh
Confidence 5889999999999999999999999999999 67776664 889999999999999999999999986 56888999
Q ss_pred cHHHHHHh
Q 041196 80 NFFIMQWS 87 (91)
Q Consensus 80 t~l~~a~~ 87 (91)
|+-..|+-
T Consensus 114 TAaqmAAF 121 (396)
T KOG1710|consen 114 TAAQMAAF 121 (396)
T ss_pred hHHHHHHH
Confidence 99877764
No 70
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=4.4e-14 Score=85.06 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=65.6
Q ss_pred cccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHH
Q 041196 4 ETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 82 (91)
Q Consensus 4 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 82 (91)
..+..|-|+||-|++.||+++|++|++.| ++++..++ ||||||.|+..++..+++.|++.|+-+....-.++.|+.
T Consensus 578 qpNdEGITaLHNAiCaghyeIVkFLi~~g---anVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~ 654 (752)
T KOG0515|consen 578 QPNDEGITALHNAICAGHYEIVKFLIEFG---ANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAA 654 (752)
T ss_pred CCCccchhHHhhhhhcchhHHHHHHHhcC---CcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchh
Confidence 46788999999999999999999999999 88888888 999999999999999999999998776443334556654
Q ss_pred H
Q 041196 83 I 83 (91)
Q Consensus 83 ~ 83 (91)
.
T Consensus 655 e 655 (752)
T KOG0515|consen 655 E 655 (752)
T ss_pred h
Confidence 3
No 71
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.50 E-value=1.4e-14 Score=89.64 Aligned_cols=84 Identities=19% Similarity=0.155 Sum_probs=69.4
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
++.+|..|.+|||+|+..|+.+.++.++..+ ..++.... +.+|||.++++|+.+++.+|+.+++++ -+++.++.|
T Consensus 75 ldl~d~kg~~plhlaaw~g~~e~vkmll~q~---d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp-~i~nns~~t 150 (854)
T KOG0507|consen 75 LDLCDTKGILPLHLAAWNGNLEIVKMLLLQT---DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADP-FIRNNSKET 150 (854)
T ss_pred hhhhhccCcceEEehhhcCcchHHHHHHhcc---cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCc-cccCccccc
Confidence 4567788888888888888888888888887 45555554 889999999999999999999999886 578889999
Q ss_pred HHHHHHhhc
Q 041196 81 FFIMQWSFF 89 (91)
Q Consensus 81 ~l~~a~~~~ 89 (91)
+|.+|++++
T Consensus 151 ~ldlA~qfg 159 (854)
T KOG0507|consen 151 VLDLASRFG 159 (854)
T ss_pred HHHHHHHhh
Confidence 999998864
No 72
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.49 E-value=4e-14 Score=77.35 Aligned_cols=80 Identities=16% Similarity=0.155 Sum_probs=73.0
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 85 (91)
+...++|..|++.|..++++.|+.++ .+++..++ |.|||.+|++.++.+|++.|+..|+++ ...+..|.+++..|
T Consensus 191 k~resALsLAt~ggytdiV~lLL~r~---vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~-t~e~dsGy~~mdlA 266 (296)
T KOG0502|consen 191 KYRESALSLATRGGYTDIVELLLTRE---VDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADV-TQEDDSGYWIMDLA 266 (296)
T ss_pred hhhhhhHhHHhcCChHHHHHHHHhcC---CCcceeccCCCceeeeeecCChHHHHHHHHhcCCCc-ccccccCCcHHHHH
Confidence 34468999999999999999999999 77777777 999999999999999999999999997 67999999999999
Q ss_pred Hhhcc
Q 041196 86 WSFFF 90 (91)
Q Consensus 86 ~~~~~ 90 (91)
+..+|
T Consensus 267 ValGy 271 (296)
T KOG0502|consen 267 VALGY 271 (296)
T ss_pred HHhhh
Confidence 98776
No 73
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.48 E-value=1.9e-13 Score=85.07 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=66.9
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccC-----------------------CC-CchHHHHHHHhCHHHHHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDK-----------------------DR-KMTALHLAAARGLARANER 62 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-----------------------~~-~~~~l~~a~~~~~~~~~~~ 62 (91)
..|.|+||+|+.+.+.++|+.|++.|+| ++.+ .. |+.||.+|+..++.+++++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gAD---V~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrl 258 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGAD---VHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRL 258 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCc---hhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHH
Confidence 5789999999999999999999999944 3322 11 6789999999999999999
Q ss_pred HHhcCcccccccCCCCCcHHHHHHhh
Q 041196 63 IISLAAKCYELVDDRGWNFFIMQWSF 88 (91)
Q Consensus 63 l~~~~~~~~~~~~~~~~t~l~~a~~~ 88 (91)
|+++|+++ +.+|..|+|.||..+-+
T Consensus 259 Ll~~gAd~-~aqDS~GNTVLH~lVi~ 283 (782)
T KOG3676|consen 259 LLAHGADP-NAQDSNGNTVLHMLVIH 283 (782)
T ss_pred HHhcCCCC-CccccCCChHHHHHHHH
Confidence 99999997 78999999999987654
No 74
>PHA02792 ankyrin-like protein; Provisional
Probab=99.48 E-value=1.1e-13 Score=85.38 Aligned_cols=86 Identities=15% Similarity=0.004 Sum_probs=71.1
Q ss_pred cccccCCCchHHHHHHH-hCCHHHHHHHHhcCCCC-C--------------------------------CcccCCC-Cch
Q 041196 2 IKETDQYGWALIHYAAY-YNQYQQIYVLLEIDPTA-S--------------------------------NIVDKDR-KMT 46 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~-~~~~~~~~~ll~~~~~~-~--------------------------------~~~~~~~-~~~ 46 (91)
+|.++..|.+|+++|+. .++.+++++|++.|++. + .++-++. |.|
T Consensus 98 vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t 177 (631)
T PHA02792 98 INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKT 177 (631)
T ss_pred cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCc
Confidence 57788889999999965 69999999999999651 1 0112233 899
Q ss_pred HHHHHHHhC-------HHHHHHHHHhcCcccccccCCCCCcHHHHHHhh
Q 041196 47 ALHLAAARG-------LARANERIISLAAKCYELVDDRGWNFFIMQWSF 88 (91)
Q Consensus 47 ~l~~a~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 88 (91)
|||+++..+ ..+++++|+++|+++ +.+|..|.||||+|+.+
T Consensus 178 ~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~ 225 (631)
T PHA02792 178 VLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDK 225 (631)
T ss_pred hHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHc
Confidence 999999999 799999999999997 67899999999999875
No 75
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.47 E-value=4.4e-14 Score=88.67 Aligned_cols=82 Identities=22% Similarity=0.234 Sum_probs=75.9
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC--CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR--KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 79 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 79 (91)
+|.+|..|+|+||+++.-+..+++++|+.+| +++..++. |+||||-|...|+.+|+-.|+.+|+.. .++|..|.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhG---idv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL-~i~Dkegl 120 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHG---IDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL-RIKDKEGL 120 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcC---ceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce-EEecccCC
Confidence 6889999999999999999999999999999 77777775 999999999999999999999999985 78999999
Q ss_pred cHHHHHHh
Q 041196 80 NFFIMQWS 87 (91)
Q Consensus 80 t~l~~a~~ 87 (91)
.||...++
T Consensus 121 splq~~~r 128 (1267)
T KOG0783|consen 121 SPLQFLSR 128 (1267)
T ss_pred CHHHHHhh
Confidence 99998766
No 76
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.45 E-value=2.6e-13 Score=87.74 Aligned_cols=78 Identities=21% Similarity=0.165 Sum_probs=59.2
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQW 86 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 86 (91)
.+-+++|.+...+...+++.++++| ++.+.+.. +.||||+|+..|+.++|++|+++|+++ ..++..|+||||.|+
T Consensus 506 ~~l~~lhla~~~~~v~~~~~l~~~g---a~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv-~ak~~~G~TPLH~Aa 581 (1143)
T KOG4177|consen 506 KGLTPLHLAADEDTVKVAKILLEHG---ANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADV-NAKDKLGYTPLHQAA 581 (1143)
T ss_pred hccchhhhhhhhhhHHHHHHHhhcC---CceehhcccccchHHHHHhcCCchHHHHhhhCCccc-cccCCCCCChhhHHH
Confidence 3444455555455555555555555 45555554 789999999999999999999999997 679999999999999
Q ss_pred hhc
Q 041196 87 SFF 89 (91)
Q Consensus 87 ~~~ 89 (91)
+++
T Consensus 582 ~~G 584 (1143)
T KOG4177|consen 582 QQG 584 (1143)
T ss_pred HcC
Confidence 865
No 77
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.43 E-value=7.2e-13 Score=70.21 Aligned_cols=75 Identities=23% Similarity=0.308 Sum_probs=65.3
Q ss_pred hHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhh
Q 041196 11 ALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSF 88 (91)
Q Consensus 11 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 88 (91)
..+.+|+..+....|+.|++..++. ++.++. +.||||-|+-.|+.+++..|+.+|++. +.++..|+||||.||+.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~--vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~-~a~T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANH--VNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANK-EAKTNEGWTPLHSACKW 140 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhcccc--ccccccccccHHHHHHhcCchHHHHHHHHccCCc-ccccccCccchhhhhcc
Confidence 4577899999999999999988432 456665 899999999999999999999999996 78999999999999863
No 78
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.43 E-value=5.6e-13 Score=58.75 Aligned_cols=45 Identities=20% Similarity=0.098 Sum_probs=36.6
Q ss_pred CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhhc
Q 041196 44 KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 44 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 89 (91)
|.||+|+|+..|+.+++++|++.|.++ +.+|..|.||||+|++.+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g 45 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNG 45 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcc
Confidence 579999999999999999999999997 568999999999999764
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.41 E-value=1.5e-12 Score=62.50 Aligned_cols=74 Identities=18% Similarity=0.103 Sum_probs=65.2
Q ss_pred hHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhh
Q 041196 11 ALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSF 88 (91)
Q Consensus 11 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~ 88 (91)
--+.|++++|.++.++..+..| .+++....|.+|||+|+-.|+.+++++|+..|+++ +.+|..|-|||-.|+.-
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g---~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i-~~kDKygITPLLsAvwE 77 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEG---LNVNEIYGGRTPLHYAADYGQLSILEFLISIGANI-QDKDKYGITPLLSAVWE 77 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHcc---ccHHHHhCCcccchHhhhcchHHHHHHHHHhcccc-CCccccCCcHHHHHHHH
Confidence 4578899999999999999998 67665555899999999999999999999999998 67999999999887753
No 80
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.40 E-value=4.9e-13 Score=80.16 Aligned_cols=81 Identities=22% Similarity=0.144 Sum_probs=72.6
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcH
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 81 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 81 (91)
+..+..|-|.||.|+..|..++.++|+..| ..+..++. |++|||.|+..|..+++++|+.+|++. ...+..|.||
T Consensus 192 d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag---~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~-d~~t~~g~~p 267 (527)
T KOG0505|consen 192 DARHARGATALHVAAANGYTEVAALLLQAG---YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADM-DAKTKMGETP 267 (527)
T ss_pred cccccccchHHHHHHhhhHHHHHHHHHHhc---cCcccccccCCCcccHHHHhhhHhHHHHHHHhhccc-chhhhcCCCC
Confidence 455666999999999999999999999999 66677776 999999999999999999999999996 6899999999
Q ss_pred HHHHHh
Q 041196 82 FIMQWS 87 (91)
Q Consensus 82 l~~a~~ 87 (91)
+.++..
T Consensus 268 ~dv~de 273 (527)
T KOG0505|consen 268 LDVADE 273 (527)
T ss_pred ccchhh
Confidence 987754
No 81
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.39 E-value=7.3e-12 Score=68.55 Aligned_cols=83 Identities=24% Similarity=0.192 Sum_probs=72.4
Q ss_pred cccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCH-----HHHHHHHHhcCc--ccccccC
Q 041196 4 ETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGL-----ARANERIISLAA--KCYELVD 75 (91)
Q Consensus 4 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~-----~~~~~~l~~~~~--~~~~~~~ 75 (91)
..+..+.++++.++..+..+.++.++..+ .+++.++. |.||+|+++..++ .++++.|+..|+ ++...++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~ 144 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLLASG---ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD 144 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHHHcC---CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence 44556889999999999999999999999 66666665 9999999999999 999999999999 4456679
Q ss_pred CCCCcHHHHHHhhc
Q 041196 76 DRGWNFFIMQWSFF 89 (91)
Q Consensus 76 ~~~~t~l~~a~~~~ 89 (91)
..|.||||+|+..+
T Consensus 145 ~~g~tpl~~A~~~~ 158 (235)
T COG0666 145 EDGNTPLHWAALNG 158 (235)
T ss_pred CCCCchhHHHHHcC
Confidence 99999999998765
No 82
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.38 E-value=2.3e-13 Score=84.42 Aligned_cols=84 Identities=20% Similarity=0.123 Sum_probs=73.5
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
+|..|.+|.|.||.|+.+|+.+.++.|++.. +-+...+. |.+|+|+|+..|+.++++.++.++... +..+..|.|
T Consensus 42 ~n~qd~~gfTalhha~Lng~~~is~llle~e---a~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~-na~~~e~~t 117 (854)
T KOG0507|consen 42 HNLQDYSGFTLLHHAVLNGQNQISKLLLDYE---ALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDIL-NAVNIENET 117 (854)
T ss_pred ccccCccchhHHHHHHhcCchHHHHHHhcch---hhhhhhhccCcceEEehhhcCcchHHHHHHhcccCC-CcccccCcC
Confidence 4678899999999999999999999999998 44444444 899999999999999999999888664 678999999
Q ss_pred HHHHHHhhc
Q 041196 81 FFIMQWSFF 89 (91)
Q Consensus 81 ~l~~a~~~~ 89 (91)
|||.++++.
T Consensus 118 plhlaaqhg 126 (854)
T KOG0507|consen 118 PLHLAAQHG 126 (854)
T ss_pred ccchhhhhc
Confidence 999999874
No 83
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.37 E-value=4.7e-12 Score=79.07 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=72.3
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcc--cccccCCCCCcHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAK--CYELVDDRGWNFFI 83 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~--~~~~~~~~~~t~l~ 83 (91)
..|..||-.|++-++.+++++|+++| +|++..++ |+|.||..+..-..++.+.+++.|+. . ..++.+|-|||.
T Consensus 238 YfGEyPLSfAAC~nq~eivrlLl~~g---Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~-~v~N~qgLTPLt 313 (782)
T KOG3676|consen 238 YFGEYPLSFAACTNQPEIVRLLLAHG---ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALE-HVRNNQGLTPLT 313 (782)
T ss_pred eeccCchHHHHHcCCHHHHHHHHhcC---CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccc-cccccCCCChHH
Confidence 46889999999999999999999999 89999998 99999999999888999999999988 5 578999999999
Q ss_pred HHHhhc
Q 041196 84 MQWSFF 89 (91)
Q Consensus 84 ~a~~~~ 89 (91)
+|++.+
T Consensus 314 LAaklG 319 (782)
T KOG3676|consen 314 LAAKLG 319 (782)
T ss_pred HHHHhh
Confidence 999753
No 84
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.34 E-value=1.4e-12 Score=78.29 Aligned_cols=79 Identities=23% Similarity=0.248 Sum_probs=71.0
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcH
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 81 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~ 81 (91)
|..+.+|.|+||-+|.-.+.+++++|+++| ++++..+. +++|+|.|+..|+..++.+|+..|+++ ...+..|..|
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e~g---a~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~-~avNsdg~~P 142 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVENG---ANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANL-LAVNSDGNMP 142 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHHhc---CCccccccccCCcchhhcccccHHHHHHHHHhhhhh-hhccCCCCCc
Confidence 566789999999999999999999999999 89998887 999999999999999999999999996 4678888887
Q ss_pred HHHH
Q 041196 82 FIMQ 85 (91)
Q Consensus 82 l~~a 85 (91)
+..+
T Consensus 143 ~dl~ 146 (527)
T KOG0505|consen 143 YDLA 146 (527)
T ss_pred cccc
Confidence 6654
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=7.4e-12 Score=75.75 Aligned_cols=71 Identities=20% Similarity=0.215 Sum_probs=62.6
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 041196 13 IHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWS 87 (91)
Q Consensus 13 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 87 (91)
|.-|+..|-+++|+..+..- .|+..... |.|+||-|...|+.++|++|++.|+++ +..|.+||||||+|++
T Consensus 554 LLDaaLeGEldlVq~~i~ev---~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganV-Na~DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEV---TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANV-NAADSDGWTPLHCAAS 625 (752)
T ss_pred HHhhhhcchHHHHHHHHHhh---cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcc-cCccCCCCchhhhhhh
Confidence 44578889999999998887 56666655 999999999999999999999999998 6899999999999986
No 86
>PF13606 Ank_3: Ankyrin repeat
Probab=99.31 E-value=5.3e-12 Score=49.11 Aligned_cols=25 Identities=28% Similarity=0.266 Sum_probs=22.4
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcC
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEID 32 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~ 32 (91)
+|+||||+|+..|+.+++++|++.|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 4889999999999999999999998
No 87
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.25 E-value=2.2e-11 Score=77.32 Aligned_cols=80 Identities=19% Similarity=0.120 Sum_probs=63.6
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhC---------HHHHHHHHHhcCccc--c---
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARG---------LARANERIISLAAKC--Y--- 71 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~---------~~~~~~~l~~~~~~~--~--- 71 (91)
..|.||||.|+..++.++++.|++.| ++++..+. |+||+|+|+..+ ...+.++++..++.. .
T Consensus 173 ~~g~tpL~~Aa~~~~~~iv~lLl~~g---adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el 249 (743)
T TIGR00870 173 YHGESPLNAAACLGSPSIVALLSEDP---ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKEL 249 (743)
T ss_pred cccccHHHHHHHhCCHHHHHHHhcCC---cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhh
Confidence 46899999999999999999999999 77777777 999999999886 234556666554432 1
Q ss_pred -cccCCCCCcHHHHHHhhc
Q 041196 72 -ELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 72 -~~~~~~~~t~l~~a~~~~ 89 (91)
..+|..|.|||++|++.+
T Consensus 250 ~~i~N~~g~TPL~~A~~~g 268 (743)
T TIGR00870 250 EVILNHQGLTPLKLAAKEG 268 (743)
T ss_pred hhhcCCCCCCchhhhhhcC
Confidence 346889999999998754
No 88
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.23 E-value=2.9e-11 Score=48.06 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=24.1
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccC
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDK 41 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 41 (91)
+|.||||+|+..++.+++++|++.| ++++.+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g---a~~~~~ 31 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG---ADINAR 31 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT---SCTTCB
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc---CCCCCC
Confidence 4788888888888888888888888 555443
No 89
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.18 E-value=2.2e-10 Score=68.99 Aligned_cols=83 Identities=19% Similarity=0.150 Sum_probs=68.6
Q ss_pred cccCCCch------HHHHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhcCcccccccCCC
Q 041196 4 ETDQYGWA------LIHYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISLAAKCYELVDDR 77 (91)
Q Consensus 4 ~~d~~g~t------~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~ 77 (91)
.+|.+|.+ .||..++.++.+..-.|+..|++. +.-....|.||||+|+..|+..-+++|+-+|+++ ...|.+
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~-N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~-~a~d~~ 199 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQA-NFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP-GAQDSS 199 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHccccc-CCCCcccCCchhHHHHhccchhhhhHHhhccCCC-CCCCCC
Confidence 35666543 589999999999999999999664 3322333899999999999999999999999997 679999
Q ss_pred CCcHHHHHHhh
Q 041196 78 GWNFFIMQWSF 88 (91)
Q Consensus 78 ~~t~l~~a~~~ 88 (91)
|.||+.+|-.-
T Consensus 200 GmtP~~~AR~~ 210 (669)
T KOG0818|consen 200 GMTPVDYARQG 210 (669)
T ss_pred CCcHHHHHHhc
Confidence 99999998653
No 90
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.06 E-value=4.4e-10 Score=68.76 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=56.4
Q ss_pred cCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCccc
Q 041196 6 DQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKC 70 (91)
Q Consensus 6 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~ 70 (91)
+.+|+|+||.||+.|+..+.++|+.+| .+...++. |.|+|.||.+.|..+|+++|+.+|+..
T Consensus 658 ~~~grt~LHLa~~~gnVvl~QLLiWyg---~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 658 EGDGRTALHLAARKGNVVLAQLLIWYG---VDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred CCCCcchhhhhhhhcchhHHHHHHHhC---ccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 567899999999999999999999999 77777887 999999999999999999999988753
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.06 E-value=1.3e-10 Score=69.61 Aligned_cols=79 Identities=20% Similarity=0.156 Sum_probs=63.2
Q ss_pred cCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhc-CcccccccCCCCCcHHH
Q 041196 6 DQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISL-AAKCYELVDDRGWNFFI 83 (91)
Q Consensus 6 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~~t~l~ 83 (91)
+.++...+.+|++.|.+..++.+.-.| .++..++. ..|+||+|+..|+.+++++|++. +.++ ..+|+.|+|||.
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g---~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~-~~kDRw~rtPlD 578 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQG---MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP-DPKDRWGRTPLD 578 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhc---ccccccccccchhheeecccCceeHHHHHHHHHcCCC-ChhhccCCCcch
Confidence 344557788899999999998888888 67777776 78999999999999999998875 4443 568999999998
Q ss_pred HHHhh
Q 041196 84 MQWSF 88 (91)
Q Consensus 84 ~a~~~ 88 (91)
-|..+
T Consensus 579 dA~~F 583 (622)
T KOG0506|consen 579 DAKHF 583 (622)
T ss_pred HhHhc
Confidence 87654
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=98.97 E-value=9.7e-10 Score=42.66 Aligned_cols=27 Identities=30% Similarity=0.330 Sum_probs=25.6
Q ss_pred CchHHHHHHHhCHHHHHHHHHhcCccc
Q 041196 44 KMTALHLAAARGLARANERIISLAAKC 70 (91)
Q Consensus 44 ~~~~l~~a~~~~~~~~~~~l~~~~~~~ 70 (91)
|+||||+|+..|+.+++++|++.|+++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 689999999999999999999999886
No 93
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.96 E-value=1.5e-09 Score=43.01 Aligned_cols=31 Identities=29% Similarity=0.303 Sum_probs=27.9
Q ss_pred CchHHHHHHHhCHHHHHHHHHhcCcccccccC
Q 041196 44 KMTALHLAAARGLARANERIISLAAKCYELVD 75 (91)
Q Consensus 44 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 75 (91)
|.||||+|+..++.+++++|++.|+++ ..+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADI-NARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCT-TCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCC-CCCC
Confidence 689999999999999999999999997 4554
No 94
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.95 E-value=3.4e-09 Score=64.25 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=35.2
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHH
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERII 64 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~ 64 (91)
++.+|..|.||||.|++.|+.+.++.|+..+ +++..++. |++|||-|+..|+.+++..++
T Consensus 48 id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~---Adv~~kN~~gWs~L~EAv~~g~~q~i~~vl 108 (560)
T KOG0522|consen 48 IDRRDPPGRTPLHLAVRLGHVEAARILLSAG---ADVSIKNNEGWSPLHEAVSTGNEQIITEVL 108 (560)
T ss_pred eccccCCCCccHHHHHHhcCHHHHHHHHhcC---CCccccccccccHHHHHHHcCCHHHHHHHH
Confidence 4455666666666666666666666666666 44444444 666666666666655544333
No 95
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.91 E-value=9.2e-09 Score=58.77 Aligned_cols=77 Identities=17% Similarity=0.099 Sum_probs=65.8
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 041196 9 GWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWS 87 (91)
Q Consensus 9 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 87 (91)
-..||.-++-.+..+-...|++.- -.++..+. |+++|..|+..|+.++++.|++.|++++...+..+.|||+.|+.
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~v---r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTV---RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHh---hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 357899999888888888888765 45667776 99999999999999999999999999866668889999999875
Q ss_pred h
Q 041196 88 F 88 (91)
Q Consensus 88 ~ 88 (91)
-
T Consensus 89 S 89 (396)
T KOG1710|consen 89 S 89 (396)
T ss_pred c
Confidence 3
No 96
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.88 E-value=7e-09 Score=62.93 Aligned_cols=77 Identities=22% Similarity=0.229 Sum_probs=60.3
Q ss_pred hHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhhc
Q 041196 11 ALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 11 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 89 (91)
.|+|+++.....+..+.++..... ..++.++- |.||||+|+..|+...++.|+..|+++ .+++..|++|||-|+.++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~-~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVS-LVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTG 99 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhh-ceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcC
Confidence 458999888776666553332211 34555555 899999999999999999999999997 689999999999998754
No 97
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.85 E-value=2.4e-08 Score=53.91 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=56.3
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAK 69 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~ 69 (91)
+|+.|..|||+++.|++.|.-+.+.+|+.+|. +.+...+. +.....+|-..|..++++.|.+.-.+
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~--a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGV--AFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCc--ccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 68999999999999999999999999999993 33444554 78999999999999999988876443
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.83 E-value=1.1e-08 Score=62.00 Aligned_cols=56 Identities=25% Similarity=0.236 Sum_probs=49.0
Q ss_pred cCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHH
Q 041196 6 DQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERII 64 (91)
Q Consensus 6 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~ 64 (91)
.+.|.||||.|++.|+...+++|+-+| ++++..+. |.+|+.+|...|+-++.+-|+
T Consensus 164 pekg~TpLHvAAk~Gq~~Q~ElL~vYG---AD~~a~d~~GmtP~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 164 PEKGNTPLHVAAKAGQILQAELLAVYG---ADPGAQDSSGMTPVDYARQGGHHELAERLV 220 (669)
T ss_pred cccCCchhHHHHhccchhhhhHHhhcc---CCCCCCCCCCCcHHHHHHhcCchHHHHHHH
Confidence 357899999999999999999999999 88888887 999999999999887655444
No 99
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.79 E-value=1.6e-09 Score=70.95 Aligned_cols=83 Identities=20% Similarity=0.194 Sum_probs=53.1
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC--CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCc
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR--KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 80 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t 80 (91)
..+|..|.+||.+|+..||..+|+.|+... +++....+ +.|+|.+++..|+.+++++|+..|++- ..++....|
T Consensus 784 ehrdkkgf~plImaatagh~tvV~~llk~h---a~veaQsdrtkdt~lSlacsggr~~vvelLl~~gank-ehrnvsDyt 859 (2131)
T KOG4369|consen 784 EHRDKKGFVPLIMAATAGHITVVQDLLKAH---ADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANK-EHRNVSDYT 859 (2131)
T ss_pred cccccccchhhhhhcccCchHHHHHHHhhh---hhhhhhcccccCceEEEecCCCcchHHHHHHHhhccc-cccchhhcC
Confidence 345666777777777777777777777666 44443332 566777777777777777777766663 556666677
Q ss_pred HHHHHHhhc
Q 041196 81 FFIMQWSFF 89 (91)
Q Consensus 81 ~l~~a~~~~ 89 (91)
||.+|..-+
T Consensus 860 Plsla~Sgg 868 (2131)
T KOG4369|consen 860 PLSLARSGG 868 (2131)
T ss_pred chhhhcCcc
Confidence 766665433
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.76 E-value=2.2e-08 Score=61.85 Aligned_cols=80 Identities=21% Similarity=0.173 Sum_probs=66.4
Q ss_pred ccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHH
Q 041196 5 TDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFI 83 (91)
Q Consensus 5 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~ 83 (91)
++.+-.+.||+|+..|+-+++++++++++.. -++..+. |.|+||-|+..++..+..+|.+.|+.. ...|..|.||-.
T Consensus 895 ~~~~~~sllh~a~~tg~~eivkyildh~p~e-lld~~de~get~lhkaa~~~~r~vc~~lvdagasl-~ktd~kg~tp~e 972 (1004)
T KOG0782|consen 895 QGPDHCSLLHYAAKTGNGEIVKYILDHGPSE-LLDMADETGETALHKAACQRNRAVCQLLVDAGASL-RKTDSKGKTPQE 972 (1004)
T ss_pred eCcchhhHHHHHHhcCChHHHHHHHhcCCHH-HHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhh-eecccCCCChHH
Confidence 4566789999999999999999999999642 2333444 999999999999999999999999996 677899999965
Q ss_pred HHH
Q 041196 84 MQW 86 (91)
Q Consensus 84 ~a~ 86 (91)
-|.
T Consensus 973 raq 975 (1004)
T KOG0782|consen 973 RAQ 975 (1004)
T ss_pred HHH
Confidence 443
No 101
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.73 E-value=7.1e-09 Score=62.47 Aligned_cols=64 Identities=19% Similarity=0.078 Sum_probs=55.4
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLA 67 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~ 67 (91)
++.+|.+.+|+||.|+..|+.+++++|++.-. .++++++. |.+||.-|..+++.+++++|-+..
T Consensus 532 ~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k--v~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 532 LETKDYDDRTALHVAAAEGHVEVVKFLLNACK--VDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred ccccccccchhheeecccCceeHHHHHHHHHc--CCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 57899999999999999999999999998632 45666665 899999999999999999987653
No 102
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.71 E-value=3.3e-09 Score=69.55 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=68.9
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 041196 9 GWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWS 87 (91)
Q Consensus 9 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~ 87 (91)
-.|+|-.||..|+.|.+++|+.+| +++.-++. |.+|+.+++..|+..++..|+...+++....|+.++|+|.+||.
T Consensus 757 ~~t~LT~acaggh~e~vellv~rg---aniehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs 833 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEVELLVVRG---ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS 833 (2131)
T ss_pred ccccccccccCccHHHHHHHHHhc---ccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence 358999999999999999999999 88887877 99999999999999999999999888866789999999988875
No 103
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.68 E-value=2.2e-08 Score=64.06 Aligned_cols=78 Identities=21% Similarity=0.167 Sum_probs=70.4
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQ 85 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a 85 (91)
..|.|+||.|+..+....++.|+..| ++++..+. |.+|+|.+...|+...+..++..|++. ...+..|.+|+++|
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~g---a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~-~a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNG---ADVNALDSKGRTPLHHATASGHTSIACLLLKRGADP-NAFDPDGKLPLDIA 729 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcC---CcchhhhccCCCcchhhhhhcccchhhhhccccccc-cccCccCcchhhHH
Confidence 35789999999999999999999999 77888887 999999999999999999999999995 68899999999998
Q ss_pred Hhh
Q 041196 86 WSF 88 (91)
Q Consensus 86 ~~~ 88 (91)
...
T Consensus 730 ~~~ 732 (785)
T KOG0521|consen 730 MEA 732 (785)
T ss_pred hhh
Confidence 653
No 104
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.68 E-value=1.4e-07 Score=55.76 Aligned_cols=68 Identities=19% Similarity=0.161 Sum_probs=57.4
Q ss_pred hHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHH
Q 041196 11 ALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 82 (91)
Q Consensus 11 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l 82 (91)
--|..||+.|..+.++.|++.| .+++..+. -.+||.+|+..|+.+++++|+++|+.. ..-+.+|.-.+
T Consensus 38 ~elceacR~GD~d~v~~LVetg---vnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~RC~ 106 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETG---VNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDRCH 106 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhC---CCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcchhh
Confidence 3588999999999999999999 78887776 689999999999999999999999986 33455565443
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.53 E-value=4.3e-07 Score=56.19 Aligned_cols=76 Identities=20% Similarity=0.132 Sum_probs=60.1
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCCcccCC--C-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHHhhc
Q 041196 13 IHYAAYYNQYQQIYVLLEIDPTASNIVDKD--R-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQWSFF 89 (91)
Q Consensus 13 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~~~~ 89 (91)
|..|........+-.|+.+|... .++... . |.|+||+|+..|+..+..+|+=+|+++ ..+|.+|.|+|++|-+-.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~-e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv-~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSRE-EVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV-MARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCch-hhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc-eecccCCchhhhhHhhcc
Confidence 45566666778888888888553 333222 2 789999999999999999999999997 689999999999998754
Q ss_pred c
Q 041196 90 F 90 (91)
Q Consensus 90 ~ 90 (91)
+
T Consensus 706 s 706 (749)
T KOG0705|consen 706 S 706 (749)
T ss_pred c
Confidence 3
No 106
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=98.03 E-value=1.6e-05 Score=29.24 Aligned_cols=25 Identities=24% Similarity=0.306 Sum_probs=19.6
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcC
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEID 32 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~ 32 (91)
.|.|++|+++..++.++++.|+..+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3677888888888888888888777
No 107
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.02 E-value=1.4e-05 Score=48.97 Aligned_cols=64 Identities=22% Similarity=0.174 Sum_probs=48.6
Q ss_pred CHHHHHHHHhcCCCCCCcc----cCCC-CchHHHHHHHhCHHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 041196 21 QYQQIYVLLEIDPTASNIV----DKDR-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFIMQW 86 (91)
Q Consensus 21 ~~~~~~~ll~~~~~~~~~~----~~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~a~ 86 (91)
-...++.|.+++.+. +.. ..+. -.|+||+|+..|..+++.+|++.|+++ ..+|..|.||+.++.
T Consensus 403 ~p~~ie~lken~lsg-nf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp-~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSG-NFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDP-STKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcc-cccccccccccccchHHHHHHhcchHHHHHHHHHhcCCc-hhcccCCCCcccccc
Confidence 356778888877432 221 1222 568999999999999999999999996 689999999987654
No 108
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.84 E-value=2.5e-05 Score=51.22 Aligned_cols=64 Identities=23% Similarity=0.338 Sum_probs=42.7
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCC-Cccc--CCC-CchHHHHHHHhCHHHHHHHHHh
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTAS-NIVD--KDR-KMTALHLAAARGLARANERIIS 65 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~--~~~-~~~~l~~a~~~~~~~~~~~l~~ 65 (91)
++.+|..|+||||||+.+|+..++..|++.|.+.. ..++ ..- |.|+..++...|+..+..+|-+
T Consensus 634 i~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 634 IDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred cccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence 46778888888888888888888888876654321 1122 111 6777777777777776665543
No 109
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.78 E-value=3.4e-05 Score=48.39 Aligned_cols=62 Identities=18% Similarity=0.149 Sum_probs=55.1
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHHHHHHhc
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARANERIISL 66 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~ 66 (91)
++..|+.|.|+||.|+..++..++++|++.| +.+...++ |.||-.-|.+.|..++..+|-..
T Consensus 927 ld~~de~get~lhkaa~~~~r~vc~~lvdag---asl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 927 LDMADETGETALHKAACQRNRAVCQLLVDAG---ASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHHhhhhhHHHHHHHHhcchHHHHHHHhcc---hhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 5667899999999999999999999999999 66776676 99999999999999999988654
No 110
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.77 E-value=4.8e-05 Score=49.15 Aligned_cols=70 Identities=17% Similarity=0.100 Sum_probs=47.2
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCC-----------------------CCc---------c-cCCC-CchH
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTA-----------------------SNI---------V-DKDR-KMTA 47 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-----------------------~~~---------~-~~~~-~~~~ 47 (91)
+|+.|.-|.++++.|..+.+.+..++|++.+-.. ... + ..-. ..||
T Consensus 55 inc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditP 134 (822)
T KOG3609|consen 55 INCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITP 134 (822)
T ss_pred hhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccH
Confidence 4667777777777777777776666666653100 000 0 1111 5789
Q ss_pred HHHHHHhCHHHHHHHHHhcCcccc
Q 041196 48 LHLAAARGLARANERIISLAAKCY 71 (91)
Q Consensus 48 l~~a~~~~~~~~~~~l~~~~~~~~ 71 (91)
+.+||..++.|++++|+.+|+.+.
T Consensus 135 liLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 135 LMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHhcchHHHHHHHHcCCCCC
Confidence 999999999999999999988763
No 111
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.70 E-value=6.9e-05 Score=48.91 Aligned_cols=48 Identities=23% Similarity=0.391 Sum_probs=39.1
Q ss_pred ccccC-CCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHH
Q 041196 3 KETDQ-YGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAA 53 (91)
Q Consensus 3 n~~d~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~ 53 (91)
+.+|+ .|+||||.|+.+|+++|+-.|+.+| .-+.-++. |.+||..-++
T Consensus 79 ~vqD~ESG~taLHRaiyyG~idca~lLL~~g---~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 79 FVQDEESGYTALHRAIYYGNIDCASLLLSKG---RSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred eeccccccchHhhHhhhhchHHHHHHHHhcC---CceEEecccCCCHHHHHhh
Confidence 44554 8999999999999999999999999 55555665 8999886554
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.68 E-value=9.9e-05 Score=40.34 Aligned_cols=54 Identities=22% Similarity=0.107 Sum_probs=46.6
Q ss_pred CCcccCCC-CchHHHHHHHhCHHHHHHHHHhcC-cccccccCCCCCcHHHHHHhhcc
Q 041196 36 SNIVDKDR-KMTALHLAAARGLARANERIISLA-AKCYELVDDRGWNFFIMQWSFFF 90 (91)
Q Consensus 36 ~~~~~~~~-~~~~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~~t~l~~a~~~~~ 90 (91)
.+++.++. |+|+++.|+..|..+.+.+|+..| +.+ ...|..+.++..+|.+-++
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~v-gv~d~ssldaaqlaek~g~ 58 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFV-GVTDESSLDAAQLAEKGGA 58 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccc-cccccccchHHHHHHhcCh
Confidence 47788887 999999999999999999999999 665 5789999999988876543
No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.63 E-value=2.5e-05 Score=51.23 Aligned_cols=29 Identities=41% Similarity=0.543 Sum_probs=17.9
Q ss_pred CCC-CchHHHHHHHhCHHHHHHHHHhcCcc
Q 041196 41 KDR-KMTALHLAAARGLARANERIISLAAK 69 (91)
Q Consensus 41 ~~~-~~~~l~~a~~~~~~~~~~~l~~~~~~ 69 (91)
++. |+||||+|+.+|+..++..|++.|++
T Consensus 637 ~D~~G~tpL~wAa~~G~e~l~a~l~~lga~ 666 (975)
T KOG0520|consen 637 RDRNGWTPLHWAAFRGREKLVASLIELGAD 666 (975)
T ss_pred ccCCCCcccchHhhcCHHHHHHHHHHhccc
Confidence 344 66666666666666666666655544
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.60 E-value=8.5e-05 Score=45.75 Aligned_cols=46 Identities=26% Similarity=0.280 Sum_probs=38.7
Q ss_pred cCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHh
Q 041196 6 DQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAAR 54 (91)
Q Consensus 6 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~ 54 (91)
+.--.|+||+|+..|..+++.++++.| .++..++. |.||..+++..
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg---~Dp~~kd~~Grtpy~ls~nk 473 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEG---CDPSTKDGAGRTPYSLSANK 473 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhc---CCchhcccCCCCcccccccH
Confidence 344579999999999999999999999 66667777 99999888743
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.44 E-value=0.00029 Score=25.54 Aligned_cols=27 Identities=30% Similarity=0.311 Sum_probs=23.5
Q ss_pred CchHHHHHHHhCHHHHHHHHHhcCccc
Q 041196 44 KMTALHLAAARGLARANERIISLAAKC 70 (91)
Q Consensus 44 ~~~~l~~a~~~~~~~~~~~l~~~~~~~ 70 (91)
+.+|+|+++..++.++++.|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 468999999999999999999887653
No 116
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.25 E-value=0.00055 Score=41.22 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=30.8
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCC
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPT 34 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 34 (91)
+|+.|....+||.+|+.-||..++++|+++|+.
T Consensus 62 VN~vD~fD~spL~lAsLcGHe~vvklLLenGAi 94 (516)
T KOG0511|consen 62 VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAI 94 (516)
T ss_pred cchhhcccccHHHHHHHcCcHHHHHHHHHcCCc
Confidence 688999999999999999999999999999944
No 117
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.52 E-value=0.0022 Score=42.16 Aligned_cols=56 Identities=18% Similarity=0.119 Sum_probs=46.1
Q ss_pred cccccCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCC-CchHHHHHHHhCHHHHH
Q 041196 2 IKETDQYGWALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDR-KMTALHLAAARGLARAN 60 (91)
Q Consensus 2 ~n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~ 60 (91)
+|.+|..|.+|+|.+...|+...+..++++| ++.+..+. +..|+.++....+.+.+
T Consensus 682 vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~---a~~~a~~~~~~~~l~~a~~~~~~d~~ 738 (785)
T KOG0521|consen 682 VNALDSKGRTPLHHATASGHTSIACLLLKRG---ADPNAFDPDGKLPLDIAMEAANADIV 738 (785)
T ss_pred chhhhccCCCcchhhhhhcccchhhhhcccc---ccccccCccCcchhhHHhhhccccHH
Confidence 5889999999999999999999999999999 55555554 78999999776555543
No 118
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=95.47 E-value=0.1 Score=24.37 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=39.0
Q ss_pred chHHHHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhc
Q 041196 10 WALIHYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISL 66 (91)
Q Consensus 10 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 66 (91)
...+..|+..|+.++++.+++.+ . + ....+..|....+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~---~-~-----~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN---K-P-----DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh---c-c-----HHHHHHHHHHHhhHHHHHHHHHh
Confidence 35678999999999999998765 1 1 13578899999999999999875
No 119
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.62 E-value=0.52 Score=26.11 Aligned_cols=43 Identities=14% Similarity=0.072 Sum_probs=19.2
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHH
Q 041196 14 HYAAYYNQYQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERII 64 (91)
Q Consensus 14 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~ 64 (91)
.+|+..|-..++...+++|.+ + ..+.+..|+..++..++.+++
T Consensus 148 ~~a~~kgll~F~letlkygg~---~-----~~~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 148 EKAAAKGLLPFVLETLKYGGN---V-----DIIVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHCCCHHHHHHHHHcCCc---c-----cHHHHHHHHHhhHHHHHHHhh
Confidence 344444555555444555421 1 124444455555554444443
No 120
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.47 E-value=0.2 Score=33.50 Aligned_cols=28 Identities=18% Similarity=0.136 Sum_probs=24.8
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCC
Q 041196 8 YGWALIHYAAYYNQYQQIYVLLEIDPTA 35 (91)
Q Consensus 8 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 35 (91)
.+-|||..||..+++|+++.|+..|...
T Consensus 130 ~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 130 PDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred CCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 4579999999999999999999999543
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=90.71 E-value=1.1 Score=25.86 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=32.8
Q ss_pred CHHHHHHHHhcCCCCCCcccC----CCCchHHHHHHHhCHHHHHHHHHhcCcc
Q 041196 21 QYQQIYVLLEIDPTASNIVDK----DRKMTALHLAAARGLARANERIISLAAK 69 (91)
Q Consensus 21 ~~~~~~~ll~~~~~~~~~~~~----~~~~~~l~~a~~~~~~~~~~~l~~~~~~ 69 (91)
+..+++..++.|- .+++.+ .+|.|-|.=|...+..+++.+|+.+|+.
T Consensus 229 ~~kvL~~Fi~~Gl--v~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 229 SYKVLEYFINRGL--VDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred cHHHHHHHHhccc--cccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 4566677777762 223322 2278888888888888998888888875
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=82.40 E-value=2.7 Score=24.38 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=26.2
Q ss_pred ccCCCchHHHHHHHhCCHHHHHHHHhcCC
Q 041196 5 TDQYGWALIHYAAYYNQYQQIYVLLEIDP 33 (91)
Q Consensus 5 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~ 33 (91)
+-..|.|-|--|.++++.+.+..|+++|+
T Consensus 250 ~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 250 KVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred ccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 45678999999999999999999999993
No 123
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=60.15 E-value=14 Score=21.53 Aligned_cols=30 Identities=20% Similarity=-0.028 Sum_probs=20.0
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcC
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEID 32 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~ 32 (91)
|..|....|+=..|.+.++.+..+.|++.|
T Consensus 9 n~id~~n~t~gd~a~ern~~rly~~lv~~g 38 (271)
T KOG1709|consen 9 NFIDYENKTVGDLALERNQSRLYRRLVEAG 38 (271)
T ss_pred cccChhhCCchHHHHHccHHHHHHHHHHcC
Confidence 445556666666677777777777777766
No 124
>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t
Probab=40.28 E-value=26 Score=18.21 Aligned_cols=44 Identities=11% Similarity=0.019 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCCCcccCCCCchHHHHHHHhCHHHHHHHHHhc
Q 041196 22 YQQIYVLLEIDPTASNIVDKDRKMTALHLAAARGLARANERIISL 66 (91)
Q Consensus 22 ~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~ 66 (91)
.+++++|++.=.+ ..+..+-.-.+.|-+.+..|..++..++-.+
T Consensus 37 ~ei~d~L~kRL~~-~~~hVK~K~Lrilk~l~~~G~~~f~~~~~~~ 80 (122)
T cd03572 37 QELLEYLLKRLKR-SSPHVKLKVLKIIKHLCEKGNSDFKRELQRN 80 (122)
T ss_pred HHHHHHHHHHhcC-CCCcchHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 4666777665311 1222222235677788888888877766544
No 125
>PF04964 Flp_Fap: Flp/Fap pilin component; InterPro: IPR007047 This entry is for the fimbriae associated protein Flp/Fap pilin component.
Probab=38.04 E-value=32 Score=14.40 Aligned_cols=17 Identities=29% Similarity=0.303 Sum_probs=11.5
Q ss_pred ccCCCchHHHHHHHhCC
Q 041196 5 TDQYGWALIHYAAYYNQ 21 (91)
Q Consensus 5 ~d~~g~t~l~~a~~~~~ 21 (91)
+|++|-|.+-|+..-.-
T Consensus 3 ~de~GaTaiEYali~al 19 (46)
T PF04964_consen 3 RDERGATAIEYALIAAL 19 (46)
T ss_pred cccccchHHHHHHHHHH
Confidence 57778787777665443
No 126
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=33.73 E-value=54 Score=14.86 Aligned_cols=20 Identities=15% Similarity=0.009 Sum_probs=13.7
Q ss_pred HHHHHHHhCCHHHHHHHHhc
Q 041196 12 LIHYAAYYNQYQQIYVLLEI 31 (91)
Q Consensus 12 ~l~~a~~~~~~~~~~~ll~~ 31 (91)
++..++..|..+.++.++.+
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~ 21 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKH 21 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 45567777777777766664
No 127
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=29.11 E-value=17 Score=24.20 Aligned_cols=30 Identities=20% Similarity=0.435 Sum_probs=22.1
Q ss_pred ccccCCCchHHHHHHHhCCHHHHHHHHhcC
Q 041196 3 KETDQYGWALIHYAAYYNQYQQIYVLLEID 32 (91)
Q Consensus 3 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~~ 32 (91)
+.+|..|.+|+|+++..|..++++.++...
T Consensus 423 ~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~ 452 (605)
T KOG3836|consen 423 NDDDKFGFTPLHIPQISGDPRIIQLLLNCK 452 (605)
T ss_pred chhcccccccccccCCCCCHHHhhhhhhhh
Confidence 456777788888888888888877766543
No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=22.97 E-value=1.7e+02 Score=17.11 Aligned_cols=43 Identities=19% Similarity=0.047 Sum_probs=30.5
Q ss_pred chHHHHHHHhCHHHHHH-HHHhcCccc---ccccCCCCCcHHHHHHh
Q 041196 45 MTALHLAAARGLARANE-RIISLAAKC---YELVDDRGWNFFIMQWS 87 (91)
Q Consensus 45 ~~~l~~a~~~~~~~~~~-~l~~~~~~~---~~~~~~~~~t~l~~a~~ 87 (91)
..|||-+..-++.+++. +++++.+.+ .+..|.+|..+|.+|..
T Consensus 223 e~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~ 269 (280)
T KOG4591|consen 223 ENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALC 269 (280)
T ss_pred cchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHH
Confidence 46899998888888764 566665443 23467888898887754
No 129
>PF12854 PPR_1: PPR repeat
Probab=20.32 E-value=75 Score=11.93 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=13.7
Q ss_pred hHHHHHHHhCCHHHHHHHHhc
Q 041196 11 ALIHYAAYYNQYQQIYVLLEI 31 (91)
Q Consensus 11 t~l~~a~~~~~~~~~~~ll~~ 31 (91)
+.++.-|+.|..+-+..+++.
T Consensus 12 ~lI~~~Ck~G~~~~A~~l~~~ 32 (34)
T PF12854_consen 12 TLIDGYCKAGRVDEAFELFDE 32 (34)
T ss_pred HHHHHHHHCCCHHHHHHHHHh
Confidence 345556778888777666653
No 130
>PF12514 DUF3718: Protein of unknown function (DUF3718); InterPro: IPR022193 This entry is represented by Bacteriophage Aaphi23, Orf19. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important.
Probab=20.20 E-value=1.1e+02 Score=14.00 Aligned_cols=22 Identities=27% Similarity=0.360 Sum_probs=16.0
Q ss_pred CCCchHHHHHHHhCCHHHHHHH
Q 041196 7 QYGWALIHYAAYYNQYQQIYVL 28 (91)
Q Consensus 7 ~~g~t~l~~a~~~~~~~~~~~l 28 (91)
-+|.+.+-.|..+|-.+..++|
T Consensus 33 CNG~sl~~FA~~~~A~kt~~~l 54 (68)
T PF12514_consen 33 CNGESLLRFAASYGANKTAEFL 54 (68)
T ss_pred ECCcCHHHHHHHcCHHHHHHHH
Confidence 4677777777777777777776
Done!