BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>041198
MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL
HREVDDLSDRLSELLASIDSNSAEAAIIRSLLM
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with KDR KDR KDR KIDARI	protein from Arabidopsis thaliana	5.0e-28
BLAST match view associations BLAST with PRE5 PRE5 PRE5 Paclobutrazol Resistance 5	protein from Arabidopsis thaliana	2.3e-23
BLAST match view associations BLAST with BS1 BS1 BS1 AT1G74500	protein from Arabidopsis thaliana	7.8e-23
BLAST match view associations BLAST with BNQ2 BNQ2 BNQ2 AT5G15160	protein from Arabidopsis thaliana	1.1e-21
BLAST match view associations BLAST with PRE1 PRE1 PRE1 AT5G39860	protein from Arabidopsis thaliana	1.1e-21
BLAST match view associations BLAST with BNQ3 BNQ3 BNQ3 AT3G47710	protein from Arabidopsis thaliana	4.0e-19
BLAST match view associations BLAST with Usf Usf Usf	protein from Drosophila melanogaster	0.00076
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041198
        (93 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716685 - symbol:KDR "KIDARI" species:3702 ...   313  5.0e-28   1
TAIR|locus:1006230235 - symbol:PRE5 "Paclobutrazol Resist...   269  2.3e-23   1
TAIR|locus:2019210 - symbol:BS1 "AT1G74500" species:3702 ...   264  7.8e-23   1
TAIR|locus:2150916 - symbol:BNQ2 "AT5G15160" species:3702...   253  1.1e-21   1
TAIR|locus:2178002 - symbol:PRE1 "AT5G39860" species:3702...   253  1.1e-21   1
TAIR|locus:2100342 - symbol:BNQ3 "AT3G47710" species:3702...   229  4.0e-19   1
FB|FBgn0029711 - symbol:Usf "Usf" species:7227 "Drosophil...    72  0.00076   2


>TAIR|locus:1005716685 [details] [associations]
            symbol:KDR "KIDARI" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0009416 "response
            to light stimulus" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009536 GO:GO:0009416
            Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239487
            EMBL:BT004686 EMBL:AK119110 IPI:IPI00527812 RefSeq:NP_849712.1
            UniGene:At.44742 IntAct:Q8GW32 PRIDE:Q8GW32
            EnsemblPlants:AT1G26945.1 GeneID:839585 KEGG:ath:AT1G26945
            TAIR:At1g26945 eggNOG:NOG330510 InParanoid:Q8GW32 OMA:NDRVPSA
            PhylomeDB:Q8GW32 ProtClustDB:CLSN2918257 Genevestigator:Q8GW32
            Uniprot:Q8GW32
        Length = 94

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 65/73 (89%), Positives = 68/73 (93%)

Query:    20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
             DQI DLVSKLQ LIPELR RRSDKVSASK+LQETC+YIR+LHREVDDLSDRLSELLAS D
Sbjct:    20 DQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLASTD 79

Query:    80 SNSAEAAIIRSLL 92
              NSAEAAIIRSLL
Sbjct:    80 DNSAEAAIIRSLL 92


>TAIR|locus:1006230235 [details] [associations]
            symbol:PRE5 "Paclobutrazol Resistance 5" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            InterPro:IPR011598 PROSITE:PS50888 GO:GO:0005739 GO:GO:0009536
            EMBL:CP002686 GO:GO:0003677 EMBL:AP000386 Gene3D:4.10.280.10
            ProtClustDB:CLSN2687512 EMBL:BT024640 IPI:IPI00527101
            RefSeq:NP_974372.1 UniGene:At.47880 UniGene:At.68125
            EnsemblPlants:AT3G28857.1 GeneID:2745895 KEGG:ath:AT3G28857
            TAIR:At3g28857 InParanoid:Q9LJX1 OMA:LHQEVDN PhylomeDB:Q9LJX1
            Genevestigator:Q9LJX1 Uniprot:Q9LJX1
        Length = 92

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 55/75 (73%), Positives = 66/75 (88%)

Query:    20 DQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
             DQ+ DLVSKL+Q +PE+  RR SDKVSASK+LQETC+YIR LHREVD+LSDRLS+LL S+
Sbjct:    18 DQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLSQLLDSV 77

Query:    79 DSNSAEAAIIRSLLM 93
             D +S EAA+IRSLLM
Sbjct:    78 DEDSPEAAVIRSLLM 92


>TAIR|locus:2019210 [details] [associations]
            symbol:BS1 "AT1G74500" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009742
            "brassinosteroid mediated signaling pathway" evidence=IGI]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0010086 "embryonic root morphogenesis"
            evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
            GO:GO:0009742 GO:GO:0005634 GO:GO:0005737 GO:GO:0009536
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0010086 EMBL:AC011765 EMBL:BT003046
            EMBL:AK227395 EMBL:AY088286 IPI:IPI00516834 PIR:A96774
            RefSeq:NP_177590.1 UniGene:At.43100 IntAct:Q9CA64 PaxDb:Q9CA64
            EnsemblPlants:AT1G74500.1 GeneID:843791 KEGG:ath:AT1G74500
            TAIR:At1g74500 eggNOG:NOG298245 HOGENOM:HOG000239487
            InParanoid:Q9CA64 OMA:GTSRISE PhylomeDB:Q9CA64 ProtClustDB:PLN03217
            Genevestigator:Q9CA64 Uniprot:Q9CA64
        Length = 93

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 55/74 (74%), Positives = 69/74 (93%)

Query:    20 DQIGDLVSKLQQLIPELR-SRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
             DQI DL+ KLQQL+PELR SRRSDKVSA+++LQ+TC+YIR+LHREVDDLS+RLSELLA+ 
Sbjct:    20 DQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELLAN- 78

Query:    79 DSNSAEAAIIRSLL 92
              S++A+AA+IRSLL
Sbjct:    79 -SDTAQAALIRSLL 91


>TAIR|locus:2150916 [details] [associations]
            symbol:BNQ2 "AT5G15160" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0009640 "photomorphogenesis" evidence=IMP]
            [GO:0048510 "regulation of timing of transition from vegetative to
            reproductive phase" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0005773 GO:GO:0009536 GO:GO:0003700 GO:GO:0009640
            GO:GO:0048510 Gene3D:4.10.280.10 SUPFAM:SSF47459
            HOGENOM:HOG000239487 EMBL:AL353993 EMBL:BT005460 EMBL:AK118887
            IPI:IPI00520085 PIR:T49951 RefSeq:NP_197020.1 UniGene:At.1763
            IntAct:Q9LXG5 STRING:Q9LXG5 EnsemblPlants:AT5G15160.1 GeneID:831368
            KEGG:ath:AT5G15160 TAIR:At5g15160 eggNOG:NOG319594
            InParanoid:Q9LXG5 OMA:SELMSTM ProtClustDB:CLSN2916841
            Genevestigator:Q9LXG5 Uniprot:Q9LXG5
        Length = 94

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 51/74 (68%), Positives = 66/74 (89%)

Query:    20 DQIGDLVSKLQQLIPELR-SRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
             DQI DL+SKL+Q IPE+R +RRS+ VSASK+LQETC+YIR+L++E DDLSDRL++LL SI
Sbjct:    19 DQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRLTQLLESI 78

Query:    79 DSNSAEAAIIRSLL 92
             D NS +AA+IRSL+
Sbjct:    79 DPNSPQAAVIRSLI 92


>TAIR|locus:2178002 [details] [associations]
            symbol:PRE1 "AT5G39860" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0009741 "response
            to brassinosteroid stimulus" evidence=IEP] [GO:0009826
            "unidimensional cell growth" evidence=IMP] [GO:0009640
            "photomorphogenesis" evidence=IMP] [GO:0048510 "regulation of
            timing of transition from vegetative to reproductive phase"
            evidence=IMP] InterPro:IPR011598 PROSITE:PS50888 GO:GO:0005739
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0003677
            GO:GO:0003700 GO:GO:0009640 GO:GO:0009826 GO:GO:0048510
            Gene3D:4.10.280.10 GO:GO:0009741 HOGENOM:HOG000239487 EMBL:AB010077
            EMBL:AY088246 IPI:IPI00533311 RefSeq:NP_198802.1 UniGene:At.30322
            STRING:Q9FLE9 PRIDE:Q9FLE9 EnsemblPlants:AT5G39860.1 GeneID:833982
            KEGG:ath:AT5G39860 TAIR:At5g39860 eggNOG:NOG315177
            InParanoid:Q9FLE9 OMA:RQILPEI PhylomeDB:Q9FLE9
            ProtClustDB:CLSN2687512 Genevestigator:Q9FLE9 Uniprot:Q9FLE9
        Length = 92

 Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 51/75 (68%), Positives = 68/75 (90%)

Query:    20 DQIGDLVSKLQQLIPEL-RSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
             +Q+ DLVSKL+Q++PE+ + RRSDK SASK+LQETC+YIR+L+REVD+LS+RLS+LL S+
Sbjct:    18 NQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLNREVDNLSERLSQLLESV 77

Query:    79 DSNSAEAAIIRSLLM 93
             D +S EAA+IRSLLM
Sbjct:    78 DEDSPEAAVIRSLLM 92


>TAIR|locus:2100342 [details] [associations]
            symbol:BNQ3 "AT3G47710" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0009640
            "photomorphogenesis" evidence=IMP] [GO:0048510 "regulation of
            timing of transition from vegetative to reproductive phase"
            evidence=IMP] InterPro:IPR011598 Pfam:PF00010 SMART:SM00353
            GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GO:GO:0003700
            GO:GO:0009640 GO:GO:0048510 Gene3D:4.10.280.10 SUPFAM:SSF47459
            IPI:IPI00523403 RefSeq:NP_190355.2 UniGene:At.53820
            EnsemblPlants:AT3G47710.1 GeneID:823925 KEGG:ath:AT3G47710
            OMA:ELANNRR Uniprot:F4JCN9
        Length = 92

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 50/75 (66%), Positives = 63/75 (84%)

Query:    20 DQIGDLVSKLQQLIPEL-RSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
             +QI DLV +L +L+PEL  +RRS KVSAS++LQETC YIR+L +EVDDLS+RLS+LL S 
Sbjct:    19 EQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLLEST 78

Query:    79 DSNSAEAAIIRSLLM 93
             DS  A+AA+IRSLLM
Sbjct:    79 DS--AQAALIRSLLM 91


>FB|FBgn0029711 [details] [associations]
            symbol:Usf "Usf" species:7227 "Drosophila melanogaster"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0006351 "transcription, DNA-dependent" evidence=ISS]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            EMBL:AE014298 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P22415
            GeneTree:ENSGT00390000004498 eggNOG:NOG272240 FlyBase:FBgn0029711
            RefSeq:NP_572167.3 RefSeq:NP_726931.2 UniGene:Dm.5348
            ProteinModelPortal:Q9W4J8 SMR:Q9W4J8 IntAct:Q9W4J8 MINT:MINT-755429
            STRING:Q9W4J8 PRIDE:Q9W4J8 EnsemblMetazoa:FBtr0070701
            EnsemblMetazoa:FBtr0308917 GeneID:31384 KEGG:dme:Dmel_CG17592
            UCSC:CG17592-RB CTD:31384 InParanoid:Q9W4J8 OMA:QIYLTIC
            PhylomeDB:Q9W4J8 GenomeRNAi:31384 NextBio:773371
            ArrayExpress:Q9W4J8 Bgee:Q9W4J8 Uniprot:Q9W4J8
        Length = 437

 Score = 72 (30.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query:    45 SASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSA 83
             S S+IL + C+YI+S+  E+D L D L E  +   SN A
Sbjct:   327 SKSQILIKACEYIKSMQGEIDTLRDCLRETDSLRASNQA 365

 Score = 42 (19.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query:    20 DQIGDLVSKLQQLIPELRSRRS 41
             D+I   + KL++++P L S  S
Sbjct:   268 DKINSWIFKLKEMLPSLSSSSS 289


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.337    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       93        76   0.00091  102 3  10 22  0.36    29
                                                     29  0.48    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  502 (53 KB)
  Total size of DFA:  99 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.60u 0.10s 15.70t   Elapsed:  00:00:01
  Total cpu time:  15.60u 0.10s 15.70t   Elapsed:  00:00:01
  Start:  Fri May 10 02:14:26 2013   End:  Fri May 10 02:14:27 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
