BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041198
(93 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425746|ref|XP_002276549.1| PREDICTED: transcription factor bHLH135 [Vitis vinifera]
gi|147833933|emb|CAN68305.1| hypothetical protein VITISV_041983 [Vitis vinifera]
gi|296086398|emb|CBI31987.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 76/81 (93%)
Query: 13 GVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLS 72
GVSRIS DQI DLVSKLQQLIPE+R+RRSDKVSASK+LQETC+YIR+LHREVDDLSDRLS
Sbjct: 12 GVSRISDDQIADLVSKLQQLIPEIRNRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLS 71
Query: 73 ELLASIDSNSAEAAIIRSLLM 93
LLAS D++S +AAIIRSLLM
Sbjct: 72 ALLASTDTDSDQAAIIRSLLM 92
>gi|356550791|ref|XP_003543767.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 91
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 83/92 (90%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRSR Q S +RIS DQI DLVSKL+QL+PE+R RRSDKVSASK+LQETC+YIRSL
Sbjct: 1 MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSL 58
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREVDDLS+RLS+LLA+ID++S EAAIIRSL+
Sbjct: 59 HREVDDLSERLSQLLATIDADSPEAAIIRSLI 90
>gi|356500403|ref|XP_003519021.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 93
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 76/84 (90%)
Query: 10 QSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
QS + I+ QI DLVSKLQQLIPELR+RRSDKVSA+K+LQETC+YI++LHREVDDLSD
Sbjct: 10 QSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSD 69
Query: 70 RLSELLASIDSNSAEAAIIRSLLM 93
RLSELLA+ DSNSA+AAIIRSLLM
Sbjct: 70 RLSELLANTDSNSAQAAIIRSLLM 93
>gi|356526903|ref|XP_003532055.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 93
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 77/83 (92%), Gaps = 1/83 (1%)
Query: 12 SGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDR 70
SGVS I+ QI DL+SKLQQLIPELR+RRSDKVSASK+LQETC+YI+SLHREVDDLSDR
Sbjct: 11 SGVSTEITDAQITDLISKLQQLIPELRARRSDKVSASKVLQETCNYIKSLHREVDDLSDR 70
Query: 71 LSELLASIDSNSAEAAIIRSLLM 93
LS+LLA+ DSNSA+AAIIRSLLM
Sbjct: 71 LSQLLATTDSNSAQAAIIRSLLM 93
>gi|351726902|ref|NP_001237910.1| uncharacterized protein LOC100305611 [Glycine max]
gi|255626077|gb|ACU13383.1| unknown [Glycine max]
Length = 91
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 83/92 (90%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRSR Q S +RIS DQI DLVSKL+QL+PE+R RRSDKVSASK+LQETC+YIRSL
Sbjct: 1 MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSL 58
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREV+DLS+RLS+LLA+ID++S EAAIIRSL+
Sbjct: 59 HREVNDLSERLSQLLATIDADSPEAAIIRSLI 90
>gi|356531780|ref|XP_003534454.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 92
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 83/92 (90%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRSR Q SG +RIS DQI +LVSKL+QL+PE+R+RRSDKVSASK+LQETC+YIRSL
Sbjct: 1 MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIRSL 58
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREV DLS+RLS+LL +ID++SAEA IIRSLL
Sbjct: 59 HREVSDLSERLSQLLTTIDADSAEAGIIRSLL 90
>gi|356498222|ref|XP_003517952.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 93
Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 76/84 (90%)
Query: 10 QSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
QS + I+ QI DLVSKLQQLIPELR+RRSDKVS++K+LQETC+YI++LHREVDDLSD
Sbjct: 10 QSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSSAKVLQETCNYIKNLHREVDDLSD 69
Query: 70 RLSELLASIDSNSAEAAIIRSLLM 93
RLSELLA+ DSNSA+AAIIRSLLM
Sbjct: 70 RLSELLANTDSNSAQAAIIRSLLM 93
>gi|359806909|ref|NP_001241066.1| uncharacterized protein LOC100784537 [Glycine max]
gi|255637698|gb|ACU19172.1| unknown [Glycine max]
Length = 92
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 82/92 (89%), Gaps = 2/92 (2%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRSR Q SG +RIS DQI +LVSKL+QL+PE+R+RRSDKVSASK+LQETC+YIR L
Sbjct: 1 MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIRGL 58
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREV DLS+RLS+LL +ID++SAEA IIRSLL
Sbjct: 59 HREVSDLSERLSQLLTTIDADSAEAGIIRSLL 90
>gi|357501781|ref|XP_003621179.1| Transcription factor style2.1 [Medicago truncatula]
gi|355496194|gb|AES77397.1| Transcription factor style2.1 [Medicago truncatula]
Length = 93
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRSR +QS G +RIS DQI DLV KL+QL+PE+R+RRSDKV ASK+LQETC+YIR+L
Sbjct: 1 MSSRRSR-QQSGGSTRISDDQIIDLVCKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNL 59
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
REVDDLS RLS+LLA+IDS+SAEA+IIRSLL
Sbjct: 60 QREVDDLSLRLSQLLATIDSDSAEASIIRSLL 91
>gi|255552902|ref|XP_002517494.1| transcription regulator, putative [Ricinus communis]
gi|223543505|gb|EEF45036.1| transcription regulator, putative [Ricinus communis]
Length = 90
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 80/93 (86%), Gaps = 3/93 (3%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MS RRSR V RI+ DQI DLVSKL+QL+PE+R RR DKVSASK+LQETC+YIR+L
Sbjct: 1 MSGRRSRQ---PSVPRITDDQIIDLVSKLRQLLPEIRQRRPDKVSASKVLQETCNYIRNL 57
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLLM 93
HREVDDLS+RLS+LLA+ID++S EAAIIRSL+M
Sbjct: 58 HREVDDLSERLSQLLATIDADSPEAAIIRSLIM 90
>gi|388506890|gb|AFK41511.1| unknown [Lotus japonicus]
Length = 93
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 73/77 (94%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
IS QI DL+SKLQQLIPELR+RRSDKVSA+K+LQETC+YI++LHREVDDLSDRLSELLA
Sbjct: 17 ISDAQITDLISKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSDRLSELLA 76
Query: 77 SIDSNSAEAAIIRSLLM 93
+ DSNSA+AAIIRSLLM
Sbjct: 77 TTDSNSAQAAIIRSLLM 93
>gi|255558162|ref|XP_002520108.1| transcription regulator, putative [Ricinus communis]
gi|223540600|gb|EEF42163.1| transcription regulator, putative [Ricinus communis]
Length = 93
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/77 (85%), Positives = 73/77 (94%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
IS DQI DLVSKLQQLIPE+R+RRSDKVSASK+LQETC+YI+SLHREVDDLSDRLSELLA
Sbjct: 16 ISDDQIIDLVSKLQQLIPEIRNRRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSELLA 75
Query: 77 SIDSNSAEAAIIRSLLM 93
S DS+SA+AAIIRSL M
Sbjct: 76 STDSDSAQAAIIRSLFM 92
>gi|30689711|ref|NP_849712.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|297850976|ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp.
lyrata]
gi|26453216|dbj|BAC43682.1| unknown protein [Arabidopsis thaliana]
gi|28416803|gb|AAO42932.1| At1g26948 [Arabidopsis thaliana]
gi|297339211|gb|EFH69628.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp.
lyrata]
gi|332192642|gb|AEE30763.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 94
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
DQI DLVSKLQ LIPELR RRSDKVSASK+LQETC+YIR+LHREVDDLSDRLSELLAS D
Sbjct: 20 DQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLASTD 79
Query: 80 SNSAEAAIIRSLL 92
NSAEAAIIRSLL
Sbjct: 80 DNSAEAAIIRSLL 92
>gi|356567536|ref|XP_003551974.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 93
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 73/79 (92%)
Query: 15 SRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSEL 74
+ I+ QI D++SKLQQLIPEL +RRSDKVSASK+LQETC+YI+SLHREVDDLSDRLS+L
Sbjct: 15 TEITDAQITDIISKLQQLIPELDARRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSQL 74
Query: 75 LASIDSNSAEAAIIRSLLM 93
LA+ DSNSA+AAIIRSLL+
Sbjct: 75 LATTDSNSAQAAIIRSLLL 93
>gi|449466975|ref|XP_004151201.1| PREDICTED: transcription factor bHLH135-like, partial [Cucumis
sativus]
Length = 82
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 75/79 (94%)
Query: 15 SRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSEL 74
SRIS DQI +LVSKL+QL+PE+R RR DKVSASK+LQETC+YIR+LHREVDDLS+RLS+L
Sbjct: 3 SRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQL 62
Query: 75 LASIDSNSAEAAIIRSLLM 93
L++IDS+SAEAAIIRSL+M
Sbjct: 63 LSTIDSDSAEAAIIRSLIM 81
>gi|42572553|ref|NP_974372.1| basic helix-loop-helix (bHLH) DNA-binding family protein
[Arabidopsis thaliana]
gi|9294226|dbj|BAB02128.1| DNA-binding protein-like [Arabidopsis thaliana]
gi|88900306|gb|ABD57465.1| At3g28857 [Arabidopsis thaliana]
gi|332643976|gb|AEE77497.1| basic helix-loop-helix (bHLH) DNA-binding family protein
[Arabidopsis thaliana]
Length = 92
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 80/94 (85%), Gaps = 3/94 (3%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRS 59
MS+RRSR Q+S SRIS DQ+ DLVSKL+Q +PE+ RR SDKVSASK+LQETC+YIR
Sbjct: 1 MSNRRSR--QTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRK 58
Query: 60 LHREVDDLSDRLSELLASIDSNSAEAAIIRSLLM 93
LHREVD+LSDRLS+LL S+D +S EAA+IRSLLM
Sbjct: 59 LHREVDNLSDRLSQLLDSVDEDSPEAAVIRSLLM 92
>gi|224140967|ref|XP_002323848.1| predicted protein [Populus trichocarpa]
gi|222866850|gb|EEF03981.1| predicted protein [Populus trichocarpa]
Length = 87
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDD 66
R RQSS V RI+ DQI DLVSKL+QL+PE+ RRSDKVSASK+LQETC+YIR+LHREVDD
Sbjct: 3 RPRQSS-VPRITDDQIIDLVSKLRQLLPEISQRRSDKVSASKVLQETCNYIRNLHREVDD 61
Query: 67 LSDRLSELLASIDSNSAEAAIIRSLL 92
LS+RLS+LLA+ID++S EAAIIRSL+
Sbjct: 62 LSERLSQLLATIDADSPEAAIIRSLI 87
>gi|357486739|ref|XP_003613657.1| Transcription factor bHLH135 [Medicago truncatula]
gi|355514992|gb|AES96615.1| Transcription factor bHLH135 [Medicago truncatula]
gi|388498954|gb|AFK37543.1| unknown [Medicago truncatula]
Length = 93
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 71/77 (92%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ QI DL+SKLQQLIPEL + RS+KVSA+K+LQETC+YI++LHREVDDLSDRLS+LLA
Sbjct: 17 ITDAQITDLISKLQQLIPELHASRSNKVSATKVLQETCNYIKNLHREVDDLSDRLSQLLA 76
Query: 77 SIDSNSAEAAIIRSLLM 93
S DSNSA+AAIIRSLLM
Sbjct: 77 STDSNSAQAAIIRSLLM 93
>gi|118487356|gb|ABK95506.1| unknown [Populus trichocarpa]
Length = 84
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 74/82 (90%)
Query: 12 SGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRL 71
S V RI+ DQI LVSKL+QL+PE+R RRSDKVSASK+LQETC+YI++LHREVDDLS+RL
Sbjct: 3 SSVPRITDDQIIHLVSKLRQLLPEIRQRRSDKVSASKVLQETCNYIKNLHREVDDLSERL 62
Query: 72 SELLASIDSNSAEAAIIRSLLM 93
S+LLA+IDS+S EA IIRSL+M
Sbjct: 63 SQLLATIDSDSPEAEIIRSLIM 84
>gi|21617952|gb|AAM67002.1| DNA-binding protein-like [Arabidopsis thaliana]
Length = 92
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRS 59
MS+RRSR Q+S SRIS DQ+ DLVSKL+Q +PE+ RR SDKVSAS +LQETC+YIR
Sbjct: 1 MSNRRSR--QTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASXVLQETCNYIRK 58
Query: 60 LHREVDDLSDRLSELLASIDSNSAEAAIIRSLLM 93
LHREVD+LSDRLS+LL S+D +S EAA+IRSLLM
Sbjct: 59 LHREVDNLSDRLSQLLDSVDEDSPEAAVIRSLLM 92
>gi|225452765|ref|XP_002283094.1| PREDICTED: transcription factor bHLH135 [Vitis vinifera]
gi|296082887|emb|CBI22188.3| unnamed protein product [Vitis vinifera]
Length = 90
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
DQI +LVSKLQQL+PE+R+RRSDKVSASK+LQETC+YIRSLHREVDDLS+RLS LLA++D
Sbjct: 17 DQIIELVSKLQQLLPEIRNRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSRLLATVD 76
Query: 80 SNSAEAAIIRSLLM 93
++S EAAIIRSL+M
Sbjct: 77 ADSPEAAIIRSLIM 90
>gi|224077596|ref|XP_002305320.1| predicted protein [Populus trichocarpa]
gi|222848284|gb|EEE85831.1| predicted protein [Populus trichocarpa]
Length = 90
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 73/80 (91%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSE 73
V RI+ DQI LVSKL+QL+PE+R RRSDKVSASK+LQETC+YI++LHREVDDLS+RLS+
Sbjct: 11 VPRITDDQIIHLVSKLRQLLPEIRQRRSDKVSASKVLQETCNYIKNLHREVDDLSERLSQ 70
Query: 74 LLASIDSNSAEAAIIRSLLM 93
LLA+IDS+S EA IIRSL+M
Sbjct: 71 LLATIDSDSPEAEIIRSLIM 90
>gi|351724407|ref|NP_001235265.1| uncharacterized protein LOC100527636 [Glycine max]
gi|255632824|gb|ACU16765.1| unknown [Glycine max]
Length = 92
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 71/77 (92%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R RRSDKVSASK+LQETC+YIRSLHREVDDLS+RLSELLA
Sbjct: 17 ITDDQINDLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSELLA 76
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +A+AAIIR+LLM
Sbjct: 77 TTD--TAQAAIIRNLLM 91
>gi|388496106|gb|AFK36119.1| unknown [Lotus japonicus]
Length = 92
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/77 (79%), Positives = 71/77 (92%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R RRSDKVSASK+LQETC+YIRSLHREVDDLS+RLSELLA
Sbjct: 17 ITDDQIHDLVSKLQQLLPEIRERRSDKVSASKVLQETCNYIRSLHREVDDLSERLSELLA 76
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +A+AAIIR+LLM
Sbjct: 77 TTD--TAQAAIIRNLLM 91
>gi|255540973|ref|XP_002511551.1| transcription regulator, putative [Ricinus communis]
gi|223550666|gb|EEF52153.1| transcription regulator, putative [Ricinus communis]
Length = 91
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 72/77 (93%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R+RRSDKVSA+K+LQETC+YIRSLHREVDDLS+RLSELLA
Sbjct: 16 ITDDQILDLVSKLQQLLPEIRNRRSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +A+AAIIR+LLM
Sbjct: 76 TTD--TAQAAIIRNLLM 90
>gi|449440772|ref|XP_004138158.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
gi|449477285|ref|XP_004154981.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
Length = 92
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 72/77 (93%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R R+SDKVSASK+LQETC+YIR+LHREVDDLS+RLSELLA
Sbjct: 17 ITDDQINDLVSKLQQLLPEIRHRQSDKVSASKVLQETCNYIRNLHREVDDLSERLSELLA 76
Query: 77 SIDSNSAEAAIIRSLLM 93
+ S++A+AAIIRSLLM
Sbjct: 77 T--SDTAQAAIIRSLLM 91
>gi|350537357|ref|NP_001234290.1| transcription factor style2.1 [Solanum lycopersicum]
gi|162280539|gb|ABX82930.1| transcription factor style2.1 [Solanum lycopersicum]
gi|162280541|gb|ABX82931.1| transcription factor style2.1 [Solanum pennellii]
gi|162280543|gb|ABX82932.1| transcription factor style2.1 [Solanum lycopersicum]
gi|162280545|gb|ABX82933.1| transcription factor style2.1 [Solanum pennellii]
Length = 92
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 72/77 (93%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
IS DQI +LVSKLQQL+PE+R+RRS K SASK+LQETC+YIR+L+R+VDDLSDRLS+LL+
Sbjct: 16 ISDDQIIELVSKLQQLLPEIRNRRSSKASASKVLQETCNYIRNLNRQVDDLSDRLSQLLS 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ID++S EAAIIRSLLM
Sbjct: 76 TIDADSPEAAIIRSLLM 92
>gi|356516770|ref|XP_003527066.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 92
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R RRSDKVSASK+LQETC+YIRSLHREV DLS+RLSELL
Sbjct: 17 ITDDQINDLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRSLHREVGDLSERLSELLD 76
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +A+AAIIR+LLM
Sbjct: 77 TTD--TAQAAIIRNLLM 91
>gi|449434802|ref|XP_004135185.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
gi|449478422|ref|XP_004155314.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
Length = 95
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Query: 17 ISYDQIGDLVSKLQQLIPELRS-RRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
IS +QI DL+SKLQQLIPE+R+ R S +VSASK+LQETC+YIRSL REVDDLSDRLSELL
Sbjct: 18 ISDEQIADLISKLQQLIPEIRNGRSSSRVSASKVLQETCNYIRSLQREVDDLSDRLSELL 77
Query: 76 ASIDSNSAEAAIIRSLLM 93
AS D SA+AAIIRSLLM
Sbjct: 78 ASTDPESAQAAIIRSLLM 95
>gi|225456723|ref|XP_002274840.1| PREDICTED: transcription factor bHLH135 [Vitis vinifera]
gi|297734002|emb|CBI15249.3| unnamed protein product [Vitis vinifera]
Length = 91
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 69/76 (90%), Gaps = 2/76 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R R SDKVSA+K+LQETC+YIRSL+REVDDLS+RLSELLA
Sbjct: 16 ITDDQINDLVSKLQQLLPEIRGRHSDKVSAAKVLQETCNYIRSLNREVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLL 92
+ D SA+AAIIRSLL
Sbjct: 76 TTD--SAQAAIIRSLL 89
>gi|388510854|gb|AFK43493.1| unknown [Medicago truncatula]
Length = 92
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 71/77 (92%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R+R SDKVSAS++LQETC+YIR+L+REVDDLS+RLSELLA
Sbjct: 17 ITDDQIHDLVSKLQQLLPEIRNRSSDKVSASRVLQETCNYIRNLNREVDDLSERLSELLA 76
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +A+AAIIR+LLM
Sbjct: 77 TTD--TAQAAIIRNLLM 91
>gi|147810883|emb|CAN67278.1| hypothetical protein VITISV_022020 [Vitis vinifera]
Length = 91
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 68/76 (89%), Gaps = 2/76 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLVSKLQQL+PE+R R SDKVSA+K+LQETC+YIRSL+REVDDLS+RLSELLA
Sbjct: 16 ITDDQINDLVSKLQQLLPEIRGRHSDKVSAAKVLQETCNYIRSLNREVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLL 92
+ D A+AAIIRSLL
Sbjct: 76 TTD--XAQAAIIRSLL 89
>gi|449469460|ref|XP_004152438.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
gi|449524000|ref|XP_004169011.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
Length = 90
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 68/73 (93%), Gaps = 2/73 (2%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+QI DLV KLQQL+PE+R+R SDKVSA+K+LQETC+YIRSLHREVDDLS+RLSELLA+
Sbjct: 18 EQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLAT-- 75
Query: 80 SNSAEAAIIRSLL 92
S++A+AAIIRSLL
Sbjct: 76 SDTAQAAIIRSLL 88
>gi|224121520|ref|XP_002318605.1| predicted protein [Populus trichocarpa]
gi|222859278|gb|EEE96825.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 68/74 (91%), Gaps = 2/74 (2%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
DQI DLV+KLQQL+PE+R+RRSDKVSA+KILQETC+YI+SLHREV DLS+RLSELL + D
Sbjct: 19 DQILDLVTKLQQLLPEIRNRRSDKVSAAKILQETCNYIKSLHREVGDLSERLSELLETTD 78
Query: 80 SNSAEAAIIRSLLM 93
+A+AAIIR+LLM
Sbjct: 79 --TAQAAIIRNLLM 90
>gi|449458023|ref|XP_004146747.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
gi|449505683|ref|XP_004162540.1| PREDICTED: transcription factor bHLH135-like [Cucumis sativus]
Length = 96
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
IS DQI DLVSKLQ+LIPELR+ R S K SAS++LQETC+YIR+LHREVDDLS+RLS+LL
Sbjct: 19 ISDDQIADLVSKLQRLIPELRNPRASHKASASRVLQETCNYIRNLHREVDDLSERLSQLL 78
Query: 76 ASIDSNSAEAAIIRSLLM 93
A+ +++SAEA IIRSL M
Sbjct: 79 AATENDSAEATIIRSLFM 96
>gi|224124054|ref|XP_002330093.1| predicted protein [Populus trichocarpa]
gi|222871227|gb|EEF08358.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ DQI DLV+KLQQL+PE R+RRS+KVSA+K LQETC+YI+SLHREVDDLS+RLSELL
Sbjct: 16 INDDQILDLVTKLQQLLPETRNRRSEKVSAAKALQETCNYIKSLHREVDDLSERLSELLE 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D + +AAIIR+LLM
Sbjct: 76 TTD--TTQAAIIRNLLM 90
>gi|297818506|ref|XP_002877136.1| transcription regulator [Arabidopsis lyrata subsp. lyrata]
gi|297322974|gb|EFH53395.1| transcription regulator [Arabidopsis lyrata subsp. lyrata]
Length = 92
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
Query: 20 DQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
DQ+ DLVSKL+Q +PE++ RR SDKVSASK+LQETC+YIR LHREVD+LSDRLS+LL S+
Sbjct: 18 DQMIDLVSKLRQFLPEIQERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLSQLLDSV 77
Query: 79 DSNSAEAAIIRSLLM 93
D +S EAA+IRSLLM
Sbjct: 78 DEDSPEAAVIRSLLM 92
>gi|297842199|ref|XP_002888981.1| hypothetical protein ARALYDRAFT_476585 [Arabidopsis lyrata subsp.
lyrata]
gi|297334822|gb|EFH65240.1| hypothetical protein ARALYDRAFT_476585 [Arabidopsis lyrata subsp.
lyrata]
Length = 93
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 70/77 (90%), Gaps = 3/77 (3%)
Query: 17 ISYDQIGDLVSKLQQLIPELR-SRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
IS DQI DL+ KLQQL+PELR SRRSDKVSA+++LQ+TC+YIR+LHREVDDLS+RLSELL
Sbjct: 17 ISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELL 76
Query: 76 ASIDSNSAEAAIIRSLL 92
A+ D +A+AA+IRSLL
Sbjct: 77 ANTD--TAQAALIRSLL 91
>gi|297805732|ref|XP_002870750.1| hypothetical protein ARALYDRAFT_916307 [Arabidopsis lyrata subsp.
lyrata]
gi|297316586|gb|EFH47009.1| hypothetical protein ARALYDRAFT_916307 [Arabidopsis lyrata subsp.
lyrata]
Length = 92
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 15 SRISYDQIGDLVSKLQQLIPEL-RSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSE 73
RIS DQ+ DLV+KL+Q++PE+ + RRSDKVSASK+LQETC+YIR+L+REVD+LS+RLS+
Sbjct: 13 PRISDDQMIDLVTKLRQILPEIGQRRRSDKVSASKVLQETCNYIRNLNREVDNLSERLSQ 72
Query: 74 LLASIDSNSAEAAIIRSLLM 93
LL S+D +S EAA+IRSLLM
Sbjct: 73 LLESVDEDSPEAAVIRSLLM 92
>gi|15221264|ref|NP_177590.1| transcription factor bHLH135 [Arabidopsis thaliana]
gi|75308937|sp|Q9CA64.1|BH135_ARATH RecName: Full=Transcription factor bHLH135; AltName: Full=Basic
helix-loop-helix protein 135; Short=AtbHLH135;
Short=bHLH 135; AltName: Full=Protein ACTIVATION-TAGGED
BRI1 SUPPRESSOR 1; Short=ATBS1; AltName: Full=Protein
PACLOBUTRAZOL RESISTANCE 1; AltName: Full=Protein
TARGET OF MOOPTEROS 7; AltName: Full=Transcription
factor EN 67; AltName: Full=bHLH transcription factor
bHLH135
gi|12324788|gb|AAG52350.1|AC011765_2 putative DNA-binding protein; 54988-54618 [Arabidopsis thaliana]
gi|21593858|gb|AAM65825.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|27764980|gb|AAO23611.1| At1g74500 [Arabidopsis thaliana]
gi|110743013|dbj|BAE99399.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332197479|gb|AEE35600.1| transcription factor bHLH135 [Arabidopsis thaliana]
Length = 93
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 71/77 (92%), Gaps = 3/77 (3%)
Query: 17 ISYDQIGDLVSKLQQLIPELR-SRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
IS DQI DL+ KLQQL+PELR SRRSDKVSA+++LQ+TC+YIR+LHREVDDLS+RLSELL
Sbjct: 17 ISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELL 76
Query: 76 ASIDSNSAEAAIIRSLL 92
A +S++A+AA+IRSLL
Sbjct: 77 A--NSDTAQAALIRSLL 91
>gi|22331645|ref|NP_190355.2| protein banquo 3 [Arabidopsis thaliana]
gi|332644800|gb|AEE78321.1| protein banquo 3 [Arabidopsis thaliana]
Length = 92
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 78/94 (82%), Gaps = 4/94 (4%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPEL-RSRRSDKVSASKILQETCDYIRS 59
MSSR+SRSRQ+ G S I+ +QI DLV +L +L+PEL +RRS KVSAS++LQETC YIR+
Sbjct: 1 MSSRKSRSRQT-GASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRN 59
Query: 60 LHREVDDLSDRLSELLASIDSNSAEAAIIRSLLM 93
L +EVDDLS+RLS+LL S D SA+AA+IRSLLM
Sbjct: 60 LSKEVDDLSERLSQLLESTD--SAQAALIRSLLM 91
>gi|78708592|gb|ABB47567.1| hypothetical protein LOC_Os10g26460 [Oryza sativa Japonica Group]
Length = 91
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 67/77 (87%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QIGDLVSKLQ L+PE R R +D+V ++++LQETC YIRSLHREVDDLS+RL+ELLA
Sbjct: 15 ITDEQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHREVDDLSERLAELLA 74
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D ++A+AA+IR LLM
Sbjct: 75 AADVSTAQAAVIRGLLM 91
>gi|125605657|gb|EAZ44693.1| hypothetical protein OsJ_29320 [Oryza sativa Japonica Group]
Length = 91
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 67/77 (87%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QIGDLVSKLQ L+PE R R +D+V ++++LQETC YIRSLHREVDDLS+RL+ELLA
Sbjct: 15 ITDEQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHREVDDLSERLAELLA 74
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D ++A+AA+IR LLM
Sbjct: 75 AADVSTAQAAVIRGLLM 91
>gi|125531849|gb|EAY78414.1| hypothetical protein OsI_33503 [Oryza sativa Indica Group]
Length = 91
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 67/77 (87%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QIGDLVSKLQ L+PE R R +D+V ++++LQETC YIRSLHREVDDLS+RL+ELLA
Sbjct: 15 ITDEQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHREVDDLSERLAELLA 74
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D ++A+AA+IR LLM
Sbjct: 75 AADVSTAQAAVIRGLLM 91
>gi|357113838|ref|XP_003558708.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 92
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 67/77 (87%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QI DLVSKLQ L+PE R R +D+V +S++LQETC YIRSLHREVDDLS+RLSELLA
Sbjct: 16 ITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCSYIRSLHREVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +SA+AAIIRSLLM
Sbjct: 76 TSDMSSAQAAIIRSLLM 92
>gi|115451023|ref|NP_001049112.1| Os03g0171300 [Oryza sativa Japonica Group]
gi|113547583|dbj|BAF11026.1| Os03g0171300 [Oryza sativa Japonica Group]
gi|125585085|gb|EAZ25749.1| hypothetical protein OsJ_09588 [Oryza sativa Japonica Group]
gi|218192177|gb|EEC74604.1| hypothetical protein OsI_10199 [Oryza sativa Indica Group]
Length = 92
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 68/77 (88%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QI DLVSKLQ L+PE R R +D+V +S++LQETC+YIRSLH+EVDDLS+RLSELLA
Sbjct: 16 ITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +SA+AAIIRSLLM
Sbjct: 76 TSDMSSAQAAIIRSLLM 92
>gi|15242499|ref|NP_198802.1| basic helix-loop-helix (bHLH) DNA-binding family protein
[Arabidopsis thaliana]
gi|10176978|dbj|BAB10210.1| DNA-binding protein-like [Arabidopsis thaliana]
gi|21593819|gb|AAM65786.1| DNA-binding protein-like [Arabidopsis thaliana]
gi|332007101|gb|AED94484.1| basic helix-loop-helix (bHLH) DNA-binding family protein
[Arabidopsis thaliana]
Length = 92
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
Query: 15 SRISYDQIGDLVSKLQQLIPEL-RSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSE 73
RIS +Q+ DLVSKL+Q++PE+ + RRSDK SASK+LQETC+YIR+L+REVD+LS+RLS+
Sbjct: 13 PRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLNREVDNLSERLSQ 72
Query: 74 LLASIDSNSAEAAIIRSLLM 93
LL S+D +S EAA+IRSLLM
Sbjct: 73 LLESVDEDSPEAAVIRSLLM 92
>gi|15242227|ref|NP_197020.1| protein banquo 2 [Arabidopsis thaliana]
gi|297811653|ref|XP_002873710.1| bHLH family protein [Arabidopsis lyrata subsp. lyrata]
gi|7671485|emb|CAB89326.1| putative protein [Arabidopsis thaliana]
gi|26452783|dbj|BAC43472.1| unknown protein [Arabidopsis thaliana]
gi|28973111|gb|AAO63880.1| putative bHLH protein [Arabidopsis thaliana]
gi|297319547|gb|EFH49969.1| bHLH family protein [Arabidopsis lyrata subsp. lyrata]
gi|332004740|gb|AED92123.1| protein banquo 2 [Arabidopsis thaliana]
Length = 94
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 20 DQIGDLVSKLQQLIPELR-SRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
DQI DL+SKL+Q IPE+R +RRS+ VSASK+LQETC+YIR+L++E DDLSDRL++LL SI
Sbjct: 19 DQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRLTQLLESI 78
Query: 79 DSNSAEAAIIRSLL 92
D NS +AA+IRSL+
Sbjct: 79 DPNSPQAAVIRSLI 92
>gi|242036771|ref|XP_002465780.1| hypothetical protein SORBIDRAFT_01g045710 [Sorghum bicolor]
gi|241919634|gb|EER92778.1| hypothetical protein SORBIDRAFT_01g045710 [Sorghum bicolor]
Length = 92
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 67/77 (87%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QI DLVSKLQ L+PE R + + +V ++++LQETC+YIRSLH+EVDDLS+RLSELLA
Sbjct: 16 ITEEQISDLVSKLQDLLPEARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +SA+AA+IRSLLM
Sbjct: 76 TSDMSSAQAAVIRSLLM 92
>gi|414865066|tpg|DAA43623.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 92
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 67/77 (87%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
I+ +QI DLVSKLQ L+PE R + + +V ++++LQETC+YIR+LH+EVDDLS+RLSELLA
Sbjct: 16 ITEEQISDLVSKLQDLLPEARLQSNARVPSARVLQETCNYIRNLHQEVDDLSERLSELLA 75
Query: 77 SIDSNSAEAAIIRSLLM 93
+ D +SA+AA+IRSLLM
Sbjct: 76 TSDMSSAQAAVIRSLLM 92
>gi|226491634|ref|NP_001152510.1| DNA binding protein [Zea mays]
gi|195657019|gb|ACG47977.1| DNA binding protein [Zea mays]
gi|413938887|gb|AFW73438.1| hypothetical protein ZEAMMB73_736000 [Zea mays]
Length = 89
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 5/92 (5%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRR SR + IS D+I +L+SKLQ L+P R R S + S +K+L+ETC YI+SL
Sbjct: 1 MSSRRPSSRGN-----ISEDEINELISKLQALLPSSRRRGSGQASTTKLLKETCSYIKSL 55
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREVDDLSDRLS+L+A++D NS A IIRS+L
Sbjct: 56 HREVDDLSDRLSDLMATMDHNSPGAEIIRSIL 87
>gi|226508810|ref|NP_001148242.1| LOC100281850 [Zea mays]
gi|195616894|gb|ACG30277.1| DNA binding protein [Zea mays]
Length = 87
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 6/92 (6%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRSR+ S +S ++I +L+S+LQ L+P R R + S +K+L+ETC YI+SL
Sbjct: 1 MSSRRSRA------STVSEEEINELISRLQTLLPSARRRGGSQASTTKLLKETCSYIKSL 54
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREVDDLSDRLS+L+AS+D NS A IIRSLL
Sbjct: 55 HREVDDLSDRLSDLMASMDHNSPGAEIIRSLL 86
>gi|357124737|ref|XP_003564054.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 90
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 70/93 (75%), Gaps = 5/93 (5%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIP-ELRSRRSDKVSASKILQETCDYIRS 59
MS RRS SR +S +S ++I +L+SKLQ L+P R R S + S +K+L+ETC YI+S
Sbjct: 1 MSGRRSSSRGNS----VSEEEINELISKLQSLLPASARRRGSSQASTTKLLKETCSYIKS 56
Query: 60 LHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
LHREVDDLSDRLS+L+A++D NS A IIRSLL
Sbjct: 57 LHREVDDLSDRLSDLMATMDHNSPGAEIIRSLL 89
>gi|326513172|dbj|BAK06826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 88
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 70/92 (76%), Gaps = 6/92 (6%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
MSSRRS S G IS ++I +L+SKLQ L+P R R S + S +K+L+ETC YI+SL
Sbjct: 1 MSSRRS----SRGA--ISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSL 54
Query: 61 HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
HREVDDLSDRLS+L++++D NSA A IIRS+L
Sbjct: 55 HREVDDLSDRLSDLMSTMDHNSAGAEIIRSIL 86
>gi|21671920|gb|AAM74282.1|AC083943_22 Hypothetical protein similar to putative DNA binding proteins
[Oryza sativa Japonica Group]
gi|31431968|gb|AAP53674.1| bHLH family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|125531848|gb|EAY78413.1| hypothetical protein OsI_33502 [Oryza sativa Indica Group]
gi|125574725|gb|EAZ16009.1| hypothetical protein OsJ_31454 [Oryza sativa Japonica Group]
Length = 88
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
Query: 9 RQSSGVSRISYDQIGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDD 66
R++SG RI+ D+I +L+SKLQ L+PE RR + + A+K+L+E C YI+SLHREVDD
Sbjct: 4 RRASG--RITDDEINELISKLQSLLPESSRRRGATSRSPATKLLKEMCSYIKSLHREVDD 61
Query: 67 LSDRLSELLASIDSNSAEAAIIRSLL 92
LS+RLSEL+A++DSNS +A IIRSLL
Sbjct: 62 LSERLSELMATMDSNSPQADIIRSLL 87
>gi|242062526|ref|XP_002452552.1| hypothetical protein SORBIDRAFT_04g027930 [Sorghum bicolor]
gi|241932383|gb|EES05528.1| hypothetical protein SORBIDRAFT_04g027930 [Sorghum bicolor]
Length = 90
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 61/76 (80%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
IS D+I +L+SKLQ L+P R R S + S +K+L+ETC YI+SLHREVDDLSDRLS+L++
Sbjct: 13 ISEDEINELISKLQALLPSSRRRGSGQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMS 72
Query: 77 SIDSNSAEAAIIRSLL 92
++D NS A IIRS+L
Sbjct: 73 TMDHNSPGAEIIRSIL 88
>gi|357138125|ref|XP_003570648.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 89
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 61/76 (80%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLA 76
IS ++I +L+SKLQ L+P R R S + S +K+L+ETC YI+SLHREVDDLSDRLS+L++
Sbjct: 12 ISEEEINELISKLQSLLPNARRRGSSQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMS 71
Query: 77 SIDSNSAEAAIIRSLL 92
++D NS A IIRS+L
Sbjct: 72 TMDHNSPGAEIIRSIL 87
>gi|226498672|ref|NP_001152393.1| DNA binding protein [Zea mays]
gi|195655845|gb|ACG47390.1| DNA binding protein [Zea mays]
gi|223944863|gb|ACN26515.1| unknown [Zea mays]
gi|413924559|gb|AFW64491.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 90
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Query: 8 SRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDD 66
SR+SS IS D++ +LVSKLQ L+P R RR S + S +K+L+ETC YI+SL REVDD
Sbjct: 3 SRRSSSHGNISEDEMNELVSKLQALLPSSRRRRGSGQASTAKLLKETCSYIKSLQREVDD 62
Query: 67 LSDRLSELLASIDSNSAEAAIIRSLL 92
LSDRLS+LL+++D NS A IIRS+L
Sbjct: 63 LSDRLSDLLSTMDHNSPAAEIIRSIL 88
>gi|46390936|dbj|BAD16450.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|125541133|gb|EAY87528.1| hypothetical protein OsI_08935 [Oryza sativa Indica Group]
gi|125583685|gb|EAZ24616.1| hypothetical protein OsJ_08379 [Oryza sativa Japonica Group]
Length = 88
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 60/73 (82%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
++I +L+SKLQ L+P R R S + S +K+L+ETC+YI+SLHREVDDLSDRLS+L+A++D
Sbjct: 14 EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMD 73
Query: 80 SNSAEAAIIRSLL 92
NS A IIRS+L
Sbjct: 74 HNSPGAEIIRSIL 86
>gi|4741188|emb|CAB41854.1| hypothetical protein [Arabidopsis thaliana]
Length = 78
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 3/78 (3%)
Query: 17 ISYDQIGDLVSKLQQLIPEL-RSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
I+ +QI DLV +L +L+PEL +RRS KVSAS++LQETC YIR+L +EVDDLS+RLS+LL
Sbjct: 2 ITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLL 61
Query: 76 ASIDSNSAEAAIIRSLLM 93
S D SA+AA+IRSLLM
Sbjct: 62 ESTD--SAQAALIRSLLM 77
>gi|115467208|ref|NP_001057203.1| Os06g0226500 [Oryza sativa Japonica Group]
gi|113595243|dbj|BAF19117.1| Os06g0226500 [Oryza sativa Japonica Group]
gi|125554623|gb|EAZ00229.1| hypothetical protein OsI_22236 [Oryza sativa Indica Group]
gi|125596562|gb|EAZ36342.1| hypothetical protein OsJ_20669 [Oryza sativa Japonica Group]
gi|215701153|dbj|BAG92577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 87
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 22 IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSN 81
I +L+SKLQ L+P R R +++ S +K+L+ETC YI+SLHREVDDLSDRLS+L+A +D N
Sbjct: 16 INELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMDHN 75
Query: 82 SAEAAIIRSLL 92
S A IIRSLL
Sbjct: 76 SPGAEIIRSLL 86
>gi|242092508|ref|XP_002436744.1| hypothetical protein SORBIDRAFT_10g008000 [Sorghum bicolor]
gi|241914967|gb|EER88111.1| hypothetical protein SORBIDRAFT_10g008000 [Sorghum bicolor]
Length = 86
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
++I +L+S+LQ L+P R R + S +K+L+ETC YI+SLHREVDDLSDRLS+L+A++D
Sbjct: 13 EEINELISRLQTLLPSARRRGGSEASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMD 72
Query: 80 SNSAEAAIIRSLL 92
NS A IIRSLL
Sbjct: 73 HNSPGAEIIRSLL 85
>gi|32490047|emb|CAE05966.1| OSJNBa0063C18.7 [Oryza sativa Japonica Group]
gi|38344909|emb|CAD41853.2| OSJNBb0079B02.12 [Oryza sativa Japonica Group]
gi|90399104|emb|CAC09458.2| H0423H10.4 [Oryza sativa Indica Group]
gi|125549935|gb|EAY95757.1| hypothetical protein OsI_17632 [Oryza sativa Indica Group]
gi|125591815|gb|EAZ32165.1| hypothetical protein OsJ_16370 [Oryza sativa Japonica Group]
Length = 104
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 20 DQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
DQI +L+SKLQ L+PE ++R + + SA+++LQETC YIRSLH+EVD+LS+ L++LLAS
Sbjct: 30 DQIAELLSKLQALLPESQARNGAHRGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASP 89
Query: 79 DSNSAEAAIIRSLLM 93
D S +AA+IRSLLM
Sbjct: 90 DVTSDQAAVIRSLLM 104
>gi|242077374|ref|XP_002448623.1| hypothetical protein SORBIDRAFT_06g030340 [Sorghum bicolor]
gi|241939806|gb|EES12951.1| hypothetical protein SORBIDRAFT_06g030340 [Sorghum bicolor]
Length = 104
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 20 DQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
DQI +L+SKLQ L+PE ++R + + SA+++LQ+TC YIRSLH+EVD+LS+ L+ELLAS
Sbjct: 30 DQISELLSKLQALLPESQTRNGAHRGSAARVLQDTCSYIRSLHQEVDNLSETLAELLASA 89
Query: 79 DSNSAEAAIIRSLLM 93
D S +AA+IRSLLM
Sbjct: 90 DVTSDQAAVIRSLLM 104
>gi|414585177|tpg|DAA35748.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 104
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 62/76 (81%), Gaps = 2/76 (2%)
Query: 20 DQIGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLAS 77
DQI +L+SKLQ L+PE ++R + + SA+++LQ+TC YIRSLH+EVD+LS+ L+ELLAS
Sbjct: 29 DQISELLSKLQALLPESQARNGGAHRGSAARVLQDTCSYIRSLHQEVDNLSETLAELLAS 88
Query: 78 IDSNSAEAAIIRSLLM 93
D S +AA+IRSLLM
Sbjct: 89 ADVTSDQAAVIRSLLM 104
>gi|115451027|ref|NP_001049114.1| Os03g0171700 [Oryza sativa Japonica Group]
gi|108706426|gb|ABF94221.1| bHLH family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113547585|dbj|BAF11028.1| Os03g0171700 [Oryza sativa Japonica Group]
gi|125542586|gb|EAY88725.1| hypothetical protein OsI_10202 [Oryza sativa Indica Group]
gi|125585087|gb|EAZ25751.1| hypothetical protein OsJ_09590 [Oryza sativa Japonica Group]
gi|215768855|dbj|BAH01084.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 91
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRRSDKVSAS-KILQETCDYIRSLHREVDDLSDRLSELL 75
I+ ++I +L+SKLQ L+PE R S++ K+L+ETC YI+SLHREVDDLSDRLSEL+
Sbjct: 14 ITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHREVDDLSDRLSELM 73
Query: 76 ASIDSNSAEAAIIRSLL 92
+++D+NS +A IIRSLL
Sbjct: 74 STMDNNSPQAEIIRSLL 90
>gi|326506598|dbj|BAJ91340.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 85
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 10/93 (10%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSAS-KILQETCDYIRS 59
MSSRR R I+ ++I +L+SKLQ L+PE RRS S++ K+L+ETC YI+S
Sbjct: 1 MSSRRGR---------ITDEEINELISKLQALLPESSRRRSASRSSASKLLKETCGYIKS 51
Query: 60 LHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
LH+EVDDLSDRLSEL++++D S +A IIRSLL
Sbjct: 52 LHQEVDDLSDRLSELMSTLDETSPQAEIIRSLL 84
>gi|255540981|ref|XP_002511555.1| DNA binding protein, putative [Ricinus communis]
gi|223550670|gb|EEF52157.1| DNA binding protein, putative [Ricinus communis]
Length = 89
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%)
Query: 8 SRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDL 67
SR+S S+ + D++ DLV KLQ L+P+L R++ +VS SKILQETC YIRSL E DDL
Sbjct: 3 SRRSGAASKFTQDELNDLVLKLQALLPQLNQRQASRVSVSKILQETCSYIRSLQSEADDL 62
Query: 68 SDRLSELLASIDSNSAEAAIIRSLL 92
S++LS+LL S + + +RS L
Sbjct: 63 SEKLSQLLDSFNIADVDIETLRSNL 87
>gi|357113836|ref|XP_003558707.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 85
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSAS-KILQETCDYIRS 59
MSSRR R I+ ++I +L+SKLQ L+PE RR+ S++ K+L+ETC YI++
Sbjct: 1 MSSRRGR---------ITDEEITELISKLQALLPESSRRRTASRSSASKLLKETCSYIKN 51
Query: 60 LHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
LH+EVDDLS+RLSEL++++D NS +A IIRSLL
Sbjct: 52 LHQEVDDLSERLSELMSTLDDNSPQAEIIRSLL 84
>gi|242039763|ref|XP_002467276.1| hypothetical protein SORBIDRAFT_01g022440 [Sorghum bicolor]
gi|241921130|gb|EER94274.1| hypothetical protein SORBIDRAFT_01g022440 [Sorghum bicolor]
Length = 95
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Query: 12 SGVSRISYDQIGDLVSKLQQLIPELRSRRSD-KVSASKILQETCDYIRSLHREVDDLSDR 70
G SRIS +QI DLV+KLQ L+P+ R R +D +V ++++LQETC YIRSLHREVDDLSD
Sbjct: 13 GGPSRISDEQISDLVTKLQALLPDARLRTNDSRVPSARVLQETCSYIRSLHREVDDLSDL 72
Query: 71 LSELLASIDSNSAEAAIIRSLLM 93
LSELL + D ++A+AA+IRSLLM
Sbjct: 73 LSELLTTADVSTAQAAVIRSLLM 95
>gi|226497200|ref|NP_001149761.1| DNA binding protein [Zea mays]
gi|242042055|ref|XP_002468422.1| hypothetical protein SORBIDRAFT_01g045690 [Sorghum bicolor]
gi|195632534|gb|ACG36703.1| DNA binding protein [Zea mays]
gi|241922276|gb|EER95420.1| hypothetical protein SORBIDRAFT_01g045690 [Sorghum bicolor]
gi|414865074|tpg|DAA43631.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 86
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
Query: 15 SRISYDQIGDLVSKLQQLIPELRSRRSDKVSAS-KILQETCDYIRSLHREVDDLSDRLSE 73
RIS D+I +L+SKLQ L+PE RR+ S++ K+L+ETC YI+SLHREVDDLS+RLS
Sbjct: 7 GRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKSLHREVDDLSERLSG 66
Query: 74 LLASIDSNSAEAAIIRSLL 92
L++++D++S +A IIRSLL
Sbjct: 67 LMSTMDNDSPQAEIIRSLL 85
>gi|326527085|dbj|BAK04484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 97
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 17 ISYDQIGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSEL 74
IS +QI +L+SKLQ L+PE R + + SA+++LQETC YIRSLHREVDDLS+ L+ L
Sbjct: 19 ISEEQISELLSKLQALLPESTQARNGAHRGSAARVLQETCSYIRSLHREVDDLSETLAAL 78
Query: 75 LASIDSNSAEAAIIRSLL 92
LAS +AA+IRSLL
Sbjct: 79 LASDAVTDEQAAVIRSLL 96
>gi|226499616|ref|NP_001151208.1| LOC100284841 [Zea mays]
gi|195645018|gb|ACG41977.1| DNA binding protein [Zea mays]
gi|413956872|gb|AFW89521.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 87
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 15 SRISYDQIGDLVSKLQQLIPELRSRRSDKVSAS-KILQETCDYIRSLHREVDDLSDRLSE 73
RIS D+I +L+SKLQ L+PE RR+ S++ K+L+ETC Y++SLHREVDDLS+RLS
Sbjct: 8 GRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYVKSLHREVDDLSERLSG 67
Query: 74 LLASIDSNSAEAAIIRSLL 92
L+ ++D++S +A IIRSLL
Sbjct: 68 LMETMDNDSPQAEIIRSLL 86
>gi|108706422|gb|ABF94217.1| hypothetical protein LOC_Os03g07510 [Oryza sativa Japonica Group]
Length = 110
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%)
Query: 41 SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLLM 93
S V +S++LQETC+YIRSLH+EVDDLS+RLSELLA+ D +SA+AAIIRSLLM
Sbjct: 58 SQVVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM 110
>gi|225456729|ref|XP_002268291.1| PREDICTED: transcription factor bHLH135 [Vitis vinifera]
gi|297733999|emb|CBI15246.3| unnamed protein product [Vitis vinifera]
Length = 90
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 8/94 (8%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRS 59
MS++R+R+ SR++ D+I DL+ KLQ L+P RR S SA +IL+ETC YI+
Sbjct: 1 MSTQRARA------SRVTDDEINDLILKLQALLPHSNQRRTSTGASAWRILKETCSYIKR 54
Query: 60 LHREVDDLSDRLSELLASIDS-NSAEAAIIRSLL 92
LHREV DLS+RLS+LL S+D+ N E +RSLL
Sbjct: 55 LHREVGDLSERLSQLLDSLDNINGVEVEQLRSLL 88
>gi|124359233|gb|ABD32218.2| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|124360944|gb|ABN08916.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 68
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 47/50 (94%)
Query: 43 KVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
KV ASK+LQETC+YIR+L REVDDLS RLS+LLA+IDS+SAEA+IIRSLL
Sbjct: 17 KVPASKVLQETCNYIRNLQREVDDLSLRLSQLLATIDSDSAEASIIRSLL 66
>gi|326488733|dbj|BAJ97978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 60
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 47/51 (92%)
Query: 43 KVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLLM 93
+V +S++LQETC YIRSLHREVDDLS+RLSELLA+ D +SA+AAIIRSLLM
Sbjct: 10 EVPSSRVLQETCTYIRSLHREVDDLSERLSELLATSDMSSAQAAIIRSLLM 60
>gi|297599922|ref|NP_001048118.2| Os02g0747900 [Oryza sativa Japonica Group]
gi|255671251|dbj|BAF10032.2| Os02g0747900 [Oryza sativa Japonica Group]
Length = 53
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 44/50 (88%)
Query: 43 KVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
+ S +K+L+ETC+YI+SLHREVDDLSDRLS+L+A++D NS A IIRS+L
Sbjct: 2 QASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSIL 51
>gi|357166276|ref|XP_003580657.1| PREDICTED: transcription factor bHLH135-like [Brachypodium
distachyon]
Length = 102
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 20 DQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASI 78
+Q+ +L+SKLQ L+P+ + R + + +AS+++Q+TC YIRSL +EVDDLS+ L+ LLAS
Sbjct: 28 EQVSELLSKLQALLPDSQPRNGAHRGAASRVVQDTCSYIRSLQQEVDDLSETLAALLASD 87
Query: 79 DSNSAEAAIIRSLLM 93
S +AA+IRSLLM
Sbjct: 88 AVPSDQAALIRSLLM 102
>gi|356524539|ref|XP_003530886.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 91
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%)
Query: 6 SRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVD 65
S R+SS S+ + ++I +LVS+LQ L+P++ R + + SASKILQETC +IR L EV+
Sbjct: 2 SGQRRSSRASKFTENEINELVSRLQVLLPQVNQRGNSRQSASKILQETCCHIRRLQEEVE 61
Query: 66 DLSDRLSELLASID 79
LS+RLSE+L S D
Sbjct: 62 QLSERLSEILDSAD 75
>gi|225452769|ref|XP_002277912.1| PREDICTED: transcription factor bHLH135-like [Vitis vinifera]
Length = 91
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 8 SRQSSGVSRISYDQIGDLVSKLQQLIP-ELRSRRSDKVSASKILQETCDYIRSLHREVDD 66
SR+S S + D++ DL+ KL+ L+P E+ + +VS ++L+ETC++I+ L EVD
Sbjct: 3 SRRSKPSSSVPEDELKDLIMKLRALLPTEINRNNTTRVSLWRLLEETCNHIKRLQTEVDG 62
Query: 67 LSDRLSELLASIDSNSAEAAIIRSLL 92
LS+RL EL+AS ++++AEA I+R +
Sbjct: 63 LSERLYELMASPNTSTAEADILRRVF 88
>gi|383100979|emb|CCD74522.1| unknown [Arabidopsis halleri subsp. halleri]
Length = 164
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 46 ASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSA 83
ASK+LQETC+YIR+L++EVDDLSDRL++LL SID NS
Sbjct: 124 ASKVLQETCNYIRNLNKEVDDLSDRLTQLLESIDPNSP 161
>gi|218186013|gb|EEC68440.1| hypothetical protein OsI_36646 [Oryza sativa Indica Group]
Length = 77
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 22 IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL----AS 77
+ +L+SKLQ ++P + K S++++LQE C YIR LHRE D LS+RL+ELL +
Sbjct: 1 MAELISKLQAVLPTRGGEANAKASSAEVLQEACRYIRRLHREADALSERLAELLLLQPSD 60
Query: 78 IDSNSAEAA-IIRSLLM 93
+ N A+ +IRSLLM
Sbjct: 61 LAINGADVPDLIRSLLM 77
>gi|115486185|ref|NP_001068236.1| Os11g0603000 [Oryza sativa Japonica Group]
gi|77551811|gb|ABA94608.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645458|dbj|BAF28599.1| Os11g0603000 [Oryza sativa Japonica Group]
gi|215766976|dbj|BAG99204.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186012|gb|EEC68439.1| hypothetical protein OsI_36643 [Oryza sativa Indica Group]
Length = 101
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 6/80 (7%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDK-VSASKILQETCDYIRSLHREVDDLSDRLSELL--- 75
+Q+ +L+SKLQ ++P + K S++++LQE C YIR LHRE D LS+RL+ELL
Sbjct: 22 EQMAELISKLQAVLPTRGGEANAKQASSAEVLQEACRYIRRLHREADALSERLAELLLLQ 81
Query: 76 -ASIDSNSAEAA-IIRSLLM 93
+ + N A+ +IRSLLM
Sbjct: 82 PSDLAINGADVPDLIRSLLM 101
>gi|357505411|ref|XP_003622994.1| DNA-binding protein-like protein [Medicago truncatula]
gi|355498009|gb|AES79212.1| DNA-binding protein-like protein [Medicago truncatula]
Length = 89
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 60/85 (70%)
Query: 8 SRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDL 67
S+++S S++ QI DLVS+LQ L+P+L R + + SASKILQET ++IR L +EV+DL
Sbjct: 3 SQRNSRDSKLKEKQINDLVSRLQLLLPQLNQRNNSRQSASKILQETLNHIRRLQKEVEDL 62
Query: 68 SDRLSELLASIDSNSAEAAIIRSLL 92
S+RL++L+ S+D N + + +
Sbjct: 63 SERLTQLMDSVDINDNDRRTLENFF 87
>gi|356519054|ref|XP_003528189.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 91
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSAS--KILQETCDYIRSLHREVDDLSDRL 71
S+ + +I DL+ +LQ L+P+L R+ + S S KI++ETC +I L EV DL +RL
Sbjct: 9 TSKFTESEINDLMLRLQALLPQLNQTRNSRASESLMKIMKETCSHINRLQNEVKDLGERL 68
Query: 72 SELLASID 79
+EL+ S+D
Sbjct: 69 AELIDSVD 76
>gi|356507147|ref|XP_003522332.1| PREDICTED: transcription factor bHLH135-like [Glycine max]
Length = 92
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 11 SSGVSRISYDQIGDLVSKLQQLIPELR---SRRSDKVSASKILQETCDYIRSLHREVDDL 67
+S S+ + +I DL+ +LQ L+P+L + R+ VS KI++ETC +I L +EV DL
Sbjct: 6 NSRTSKFTESEINDLMLRLQALLPQLNQTSNSRASSVSVMKIMKETCSHITRLQKEVKDL 65
Query: 68 SDRLSELLASID 79
+RL +L+ S+D
Sbjct: 66 GERLVQLMDSVD 77
>gi|124359232|gb|ABD32217.2| hypothetical protein MtrDRAFT_AC148762g31v2 [Medicago truncatula]
gi|124360945|gb|ABN08917.1| hypothetical protein MtrDRAFT_AC166313g28v2 [Medicago truncatula]
Length = 49
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDK 43
MSSRRSR +QS G +RIS DQI DLV KL+QL+PE+R+RRSDK
Sbjct: 1 MSSRRSR-QQSGGSTRISDDQIIDLVCKLRQLVPEIRNRRSDK 42
>gi|56407689|gb|AAV88077.1| hypothetical bHLH family protein [Ipomoea batatas]
Length = 198
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 15 SRISYDQIGDLVSKLQQLIPELRSRRSDK 43
SRIS DQI DLVSKLQ+LIPE+R RRSDK
Sbjct: 14 SRISDDQIADLVSKLQRLIPEIRGRRSDK 42
>gi|195635249|gb|ACG37093.1| ER33 protein [Zea mays]
Length = 162
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 1 MSSRRSRSRQSSGVSRISY----DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDY 56
MSS++ R+ S + +S D+IG+ V+ LQQL+ K + +LQE Y
Sbjct: 40 MSSKKPRNSNSPRTAPVSPKEKKDRIGERVAALQQLVSPF-----GKTDTASVLQEASGY 94
Query: 57 IRSLHREVDDLS 68
IR LH+++ LS
Sbjct: 95 IRFLHQQLQVLS 106
>gi|293334599|ref|NP_001169154.1| uncharacterized protein LOC100383001 [Zea mays]
gi|223975203|gb|ACN31789.1| unknown [Zea mays]
Length = 162
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 1 MSSRRSRSRQSSGVSRISY----DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDY 56
MSS++ R+ S + +S D+IG+ V+ LQQL+ K + +LQE Y
Sbjct: 40 MSSKKPRNSNSPRTAPVSPKEKKDRIGERVAALQQLVSPF-----GKTDTASVLQEASGY 94
Query: 57 IRSLHREVDDLS 68
IR LH+++ LS
Sbjct: 95 IRFLHQQLQVLS 106
>gi|326530500|dbj|BAJ97676.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 170
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 1 MSSRRSRSRQSSGVSRISY----DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDY 56
M S++ R+ G IS D++G+ V+ LQQL+ K + +LQE Y
Sbjct: 48 MGSKKPRNASPRGGGPISPKEKKDKVGERVAALQQLVSPF-----GKTDTASVLQEASGY 102
Query: 57 IRSLHREVDDLS 68
I+ LH++++ LS
Sbjct: 103 IKFLHQQLEVLS 114
>gi|123449445|ref|XP_001313441.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
gi|121895325|gb|EAY00512.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
Length = 1798
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDD 66
R+R + G + I Q DL+SKLQQ I L + D SA YI SLH+E+D+
Sbjct: 709 RNRSNEGDAEIVKTQ-ADLISKLQQQIQSLSNNPLD-FSAK------DQYINSLHQEIDE 760
Query: 67 LSDRLSELLASI 78
L RL+E A +
Sbjct: 761 LKQRLNENAAKV 772
>gi|345493532|ref|XP_001602091.2| PREDICTED: MLX-interacting protein-like [Nasonia vitripennis]
Length = 1079
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 32 LIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAIIRSL 91
LIP+L + K+S + +LQ+ DYIR L E L D + +L + IDS +A+ + +++
Sbjct: 901 LIPQLSQNPNTKMSKAAMLQKGADYIRLLRSERHQLKDEMDQLRSQIDSLNADISNCQAM 960
Query: 92 L 92
L
Sbjct: 961 L 961
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
R+ +I + + +LQ L+P + + + S +L ET +Y++SL R+V +LSD ++ L
Sbjct: 48 RVRRTKISERMKRLQDLVPNM----DKQTNTSDMLDETVEYVKSLQRKVQELSDTVARLK 103
Query: 76 A 76
A
Sbjct: 104 A 104
>gi|212721174|ref|NP_001132848.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194695568|gb|ACF81868.1| unknown [Zea mays]
gi|414586588|tpg|DAA37159.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414586589|tpg|DAA37160.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 167
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 1 MSSRRSRSRQSSGV------SRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETC 54
MSS++ R R S+ + D+IG+ V+ LQQL+ K + +LQE
Sbjct: 43 MSSKKPRPRNSNSPRTAPVSPKEKKDRIGERVAALQQLVSPF-----GKTDTASVLQEAS 97
Query: 55 DYIRSLHREVDDLS 68
YIR LH+++ LS
Sbjct: 98 GYIRFLHQQLQVLS 111
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
R+ +I + + KLQ L+P + + + S +L ET +Y++SL R+V +LSD + L
Sbjct: 399 RVRRTKISERMKKLQDLVPSM----DKQTNTSDMLDETVEYVKSLQRQVQELSDTVVRLE 454
Query: 76 AS 77
A+
Sbjct: 455 AA 456
>gi|242012493|ref|XP_002426967.1| Upstream stimulatory factor, putative [Pediculus humanus corporis]
gi|212511196|gb|EEB14229.1| Upstream stimulatory factor, putative [Pediculus humanus corporis]
Length = 339
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREVDDLSDRLSEL 74
D+I + ++KL ++IP+ S ++K SK IL + C+YI L R + LSD + E+
Sbjct: 233 DKINNWIAKLSKIIPDCSSMDNNKSVQSKGGILAKACEYIMELRRAEEQLSDCVKEI 289
>gi|242045620|ref|XP_002460681.1| hypothetical protein SORBIDRAFT_02g033000 [Sorghum bicolor]
gi|241924058|gb|EER97202.1| hypothetical protein SORBIDRAFT_02g033000 [Sorghum bicolor]
Length = 368
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 11 SSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDR 70
SS S++ ++GD ++ LQQ++ K + +L E +YI+ LH +V LSD
Sbjct: 250 SSPASQVPKVKLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKWLHEQVQLLSDP 304
Query: 71 LSELLASIDSNS 82
+ +S D N+
Sbjct: 305 YMKTSSSKDYNA 316
>gi|388453575|ref|NP_001253280.1| DNA-binding protein inhibitor ID-1 [Macaca mulatta]
gi|402882863|ref|XP_003904952.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Papio anubis]
gi|380812396|gb|AFE78072.1| DNA-binding protein inhibitor ID-1 isoform a [Macaca mulatta]
gi|383418023|gb|AFH32225.1| DNA-binding protein inhibitor ID-1 isoform a [Macaca mulatta]
gi|384946824|gb|AFI37017.1| DNA-binding protein inhibitor ID-1 isoform a [Macaca mulatta]
Length = 154
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPT 147
>gi|355784595|gb|EHH65446.1| Inhibitor of DNA binding 1 [Macaca fascicularis]
Length = 154
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPT 147
>gi|355563245|gb|EHH19807.1| Inhibitor of DNA binding 1, partial [Macaca mulatta]
Length = 154
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPT 147
>gi|312371891|gb|EFR19961.1| hypothetical protein AND_20881 [Anopheles darlingi]
Length = 362
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 6 SRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLH-RE 63
SR R+ + + D+I +++L++L+P ++ S K+ ++ILQ T D++++LH R
Sbjct: 24 SRKRRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVDHLKALHARG 83
Query: 64 VDDLS 68
+DD+S
Sbjct: 84 IDDVS 88
>gi|60826106|gb|AAX36745.1| inhibitor of DNA binding 1 [synthetic construct]
Length = 156
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISALTAEAACVPA 148
>gi|31317299|ref|NP_002156.2| DNA-binding protein inhibitor ID-1 isoform a [Homo sapiens]
gi|114681405|ref|XP_001152873.1| PREDICTED: DNA-binding protein inhibitor ID-1 isoform 1 [Pan
troglodytes]
gi|426391264|ref|XP_004061997.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Gorilla gorilla
gorilla]
gi|21264450|sp|P41134.3|ID1_HUMAN RecName: Full=DNA-binding protein inhibitor ID-1; AltName:
Full=Class B basic helix-loop-helix protein 24;
Short=bHLHb24; AltName: Full=Inhibitor of DNA binding 1
gi|1042078|gb|AAB35037.1| transcription regulator helix-loop-helix protein [Homo sapiens]
gi|1816512|gb|AAC13882.1| helix-loop-helix protein Id-1 [Homo sapiens]
gi|12653661|gb|AAH00613.1| Inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Homo sapiens]
gi|15214589|gb|AAH12420.1| Inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Homo sapiens]
gi|30583725|gb|AAP36111.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Homo sapiens]
gi|60655203|gb|AAX32165.1| inhibitor of DNA binding 1 dominant negative helix-loop-helix
protein [synthetic construct]
gi|61355326|gb|AAX41127.1| inhibitor of DNA binding 1 [synthetic construct]
gi|119596838|gb|EAW76432.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein, isoform CRA_a [Homo sapiens]
gi|119596840|gb|EAW76434.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein, isoform CRA_a [Homo sapiens]
gi|123980780|gb|ABM82219.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|123993333|gb|ABM84268.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|123995603|gb|ABM85403.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|124000295|gb|ABM87656.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|157928626|gb|ABW03609.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|157929248|gb|ABW03909.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|157929268|gb|ABW03919.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|158255740|dbj|BAF83841.1| unnamed protein product [Homo sapiens]
gi|410218786|gb|JAA06612.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Pan troglodytes]
gi|410355553|gb|JAA44380.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Pan troglodytes]
Length = 155
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISALTAEAACVPA 148
>gi|397527122|ref|XP_003833451.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein inhibitor ID-1
[Pan paniscus]
Length = 162
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 69 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 125
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 126 GGRGLPVRAPLSTLNGEISALTAEAACVPA 155
>gi|297276772|ref|XP_001111345.2| PREDICTED: hypothetical protein LOC718527 [Macaca mulatta]
Length = 723
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 613 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 671
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 672 QRMQETFKE 680
>gi|414586593|tpg|DAA37164.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 206
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 1 MSSRRSRSRQSSGV------SRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETC 54
MSS++ R R S+ + D+IG+ V+ LQQL+ K + +LQE
Sbjct: 43 MSSKKPRPRNSNSPRTAPVSPKEKKDRIGERVAALQQLVSPF-----GKTDTASVLQEAS 97
Query: 55 DYIRSLHREV 64
YIR LH+++
Sbjct: 98 GYIRFLHQQL 107
>gi|297706825|ref|XP_002830228.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Pongo abelii]
Length = 155
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISALTAEAACVPA 148
>gi|403281322|ref|XP_003932141.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Saimiri boliviensis
boliviensis]
Length = 154
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTA 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPA 147
>gi|296199908|ref|XP_002747402.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Callithrix jacchus]
Length = 155
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTA 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISALTAEAACVPA 148
>gi|30585403|gb|AAP36974.1| Homo sapiens inhibitor of DNA binding 1, dominant negative
helix-loop-helix protein [synthetic construct]
gi|61372114|gb|AAX43787.1| inhibitor of DNA binding 1 [synthetic construct]
gi|61372123|gb|AAX43788.1| inhibitor of DNA binding 1 [synthetic construct]
Length = 156
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISALTAEAACVPA 148
>gi|410300592|gb|JAA28896.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Pan troglodytes]
Length = 155
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISALTAEAACVPA 148
>gi|471124|dbj|BAA02988.1| Id-1H [Homo sapiens]
Length = 154
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPA 147
>gi|457785|emb|CAA54920.1| Id1 [Homo sapiens]
gi|1090511|prf||2019241A Id-1 protein
Length = 154
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPA 147
>gi|219888191|gb|ACL54470.1| unknown [Zea mays]
gi|414586590|tpg|DAA37161.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414586591|tpg|DAA37162.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414586592|tpg|DAA37163.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 163
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 1 MSSRRSRSRQSSGV------SRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETC 54
MSS++ R R S+ + D+IG+ V+ LQQL+ K + +LQE
Sbjct: 43 MSSKKPRPRNSNSPRTAPVSPKEKKDRIGERVAALQQLVSPF-----GKTDTASVLQEAS 97
Query: 55 DYIRSLHREV 64
YIR LH+++
Sbjct: 98 GYIRFLHQQL 107
>gi|194091|gb|AAA37879.1| helix-loop-helix protein (Id), partial [Mus musculus]
gi|148674039|gb|EDL05986.1| inhibitor of DNA binding 1, isoform CRA_a [Mus musculus]
Length = 176
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 83 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTT 139
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 140 GGRGLPVRAPLSTLNGEISALAAEAACVPA 169
>gi|395860719|ref|XP_003802655.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Otolemur garnettii]
Length = 154
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 AGRGLPVRAPLSTLNGEISALAAEAACVPA 147
>gi|348581910|ref|XP_003476720.1| PREDICTED: DNA-binding protein inhibitor ID-1-like [Cavia
porcellus]
Length = 151
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 58 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 114
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 115 GGRGLPVRAPLSTLNGEISALAAEAACVPA 144
>gi|434789|dbj|BAA01633.1| ID1 protein [Rattus norvegicus]
Length = 148
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 55 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVATA 111
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 112 GARGLPVRAPLSTLNGEISALAAEAACVPA 141
>gi|324073441|ref|NP_001191254.1| uncharacterized protein LOC100533153 [Zea mays]
gi|223943793|gb|ACN25980.1| unknown [Zea mays]
Length = 168
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 4 RRSRSRQSSGVS---RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
++SR+ S + ++ +++GD ++ LQQL+ K + +L ET +YI+ L
Sbjct: 36 KKSRTGTPSPLPATFKVRKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 90
Query: 61 HREVDDLS 68
H +V LS
Sbjct: 91 HDQVGSLS 98
>gi|82617572|ref|NP_036929.2| DNA-binding protein inhibitor ID-1 [Rattus norvegicus]
gi|203962|gb|AAA41090.1| inhibitor of DNA binding [Rattus norvegicus]
gi|117558621|gb|AAI27449.1| Inhibitor of DNA binding 1 [Rattus norvegicus]
gi|149031022|gb|EDL86049.1| inhibitor of DNA binding 1, isoform CRA_a [Rattus norvegicus]
Length = 148
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 55 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVATA 111
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 112 GGRGLPVRAPLSTLNGEISALAAEAACVPA 141
>gi|31077096|ref|NP_034625.1| DNA-binding protein inhibitor ID-1 [Mus musculus]
gi|19263559|gb|AAH25073.1| Inhibitor of DNA binding 1 [Mus musculus]
gi|71059815|emb|CAJ18451.1| Idb1 [Mus musculus]
Length = 148
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 55 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTT 111
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 112 GGRGLPVRAPLSTLNGEISALAAEAACVPA 141
>gi|348526205|ref|XP_003450611.1| PREDICTED: upstream stimulatory factor 2-like [Oreochromis
niloticus]
Length = 305
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + L ++IP+ S S K ASK IL + CDYIR L +
Sbjct: 195 RRAQHNEVERRRRDKINNWIVTLSKIIPDC-SMDSTKTGASKGGILSKACDYIRELRQSN 253
Query: 65 DDLSDRLSEL 74
L + L E+
Sbjct: 254 QRLQESLKEV 263
>gi|332248783|ref|XP_003273543.1| PREDICTED: DNA-binding protein inhibitor ID-1 [Nomascus leucogenys]
Length = 155
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I +AEAA + +
Sbjct: 119 GGRGLPVRAPLSTLNGEISPLTAEAACVPA 148
>gi|357164390|ref|XP_003580037.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 163
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 1 MSSRRSRSRQSSGVSRISY----DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDY 56
M S++ R+ + IS D++G+ V+ LQQL+ K + +LQE Y
Sbjct: 41 MGSKKPRNSSPRSGAPISPKEKKDKVGERVAALQQLVSPY-----GKTDTASVLQEASGY 95
Query: 57 IRSLHREVDDLS 68
I+ LH++++ LS
Sbjct: 96 IKFLHKQLETLS 107
>gi|194701996|gb|ACF85082.1| unknown [Zea mays]
gi|413918767|gb|AFW58699.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413918768|gb|AFW58700.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 135
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 1 MSSRRSRS---RQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
MSS++ R+ R + + D+IG+ V+ LQQL+ K + +LQE YI
Sbjct: 40 MSSKKPRNASPRLAPVSPKEKKDKIGERVAALQQLVSPF-----GKTDTASVLQEASGYI 94
Query: 58 RSLHREVDDLS 68
+ LH++++ LS
Sbjct: 95 KFLHQQLEVLS 105
>gi|156379418|ref|XP_001631454.1| predicted protein [Nematostella vectensis]
gi|156218495|gb|EDO39391.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
++ +DQ+ +V P L S++S KVS + +LQ+T DY L +E ++D
Sbjct: 19 KMGFDQLASMV-------PTLASQKSSKVSKATVLQKTVDYTTRLQQERQSMAD 65
>gi|45735905|dbj|BAD12937.1| bHLH transcription factor (bHLH123)-like protein [Oryza sativa
Japonica Group]
Length = 418
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 11 SSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
+S +++ +++GD V+ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 295 ASLAAKVRKEKLGDRVTALQQLVSPF-----GKTDTASVLHETIEYIKFLHDQVGALS 347
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 5 RSRSRQSSG----VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
R+RS Q++ R+ ++I + + LQ L+P S + + +L E +Y++SL
Sbjct: 264 RARSGQATNSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSL 319
Query: 61 HREVDDLSDRLSELLASIDSN 81
R+V+ LS +LS + ++D N
Sbjct: 320 QRQVEFLSMKLSTVNPALDFN 340
>gi|90265171|emb|CAH67739.1| H0522A01.10 [Oryza sativa Indica Group]
gi|116634833|emb|CAH67283.1| OSIGBa0103O01.1 [Oryza sativa Indica Group]
gi|125548865|gb|EAY94687.1| hypothetical protein OsI_16465 [Oryza sativa Indica Group]
Length = 156
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 1 MSSRRSRS---RQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
M+S++ R+ R + + D+IG+ V+ LQQL+ K + +LQE YI
Sbjct: 35 MTSKKPRNTNPRDAPVSPKEKKDKIGERVAALQQLVSPF-----GKTDTASVLQEASGYI 89
Query: 58 RSLHREVDDLS 68
+ LH++++ LS
Sbjct: 90 KFLHQQLEVLS 100
>gi|115459164|ref|NP_001053182.1| Os04g0493100 [Oryza sativa Japonica Group]
gi|21740790|emb|CAD41535.1| OSJNBb0091E11.4 [Oryza sativa Japonica Group]
gi|38346229|emb|CAE02051.2| OJ990528_30.9 [Oryza sativa Japonica Group]
gi|113564753|dbj|BAF15096.1| Os04g0493100 [Oryza sativa Japonica Group]
gi|125590854|gb|EAZ31204.1| hypothetical protein OsJ_15304 [Oryza sativa Japonica Group]
gi|215678727|dbj|BAG95164.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765240|dbj|BAG86937.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 156
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 1 MSSRRSRS---RQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
M+S++ R+ R + + D+IG+ V+ LQQL+ K + +LQE YI
Sbjct: 35 MTSKKPRNTSPRDAPVSPKEKKDKIGERVAALQQLVSPF-----GKTDTASVLQEASGYI 89
Query: 58 RSLHREVDDLS 68
+ LH++++ LS
Sbjct: 90 KFLHQQLEVLS 100
>gi|195635577|gb|ACG37257.1| ER33 protein [Zea mays]
Length = 156
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 1 MSSRRSRS---RQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
MSS++ R+ R + + D+IG+ V+ LQQL+ K + +LQE YI
Sbjct: 35 MSSKKPRNASPRLAPVSPKEKKDKIGERVAALQQLVSPF-----GKTDTASVLQEASGYI 89
Query: 58 RSLHREVDDLS 68
+ LH++++ LS
Sbjct: 90 KFLHQQLEVLS 100
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 5 RSRSRQSSG----VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
R+RS Q++ R+ ++I + + LQ L+P S + + +L E +Y++SL
Sbjct: 264 RARSGQATNSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSL 319
Query: 61 HREVDDLSDRLSELLASIDSN 81
R+V+ LS +LS + ++D N
Sbjct: 320 QRQVEFLSMKLSTVNPALDFN 340
>gi|170065511|ref|XP_001867969.1| bHLH protein Hesr-1/Hey1 [Culex quinquefasciatus]
gi|167862488|gb|EDS25871.1| bHLH protein Hesr-1/Hey1 [Culex quinquefasciatus]
Length = 394
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 5 RSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLH-R 62
+SR R+ + + D+I +++L++L+P ++ S K+ ++ILQ T D++++LH R
Sbjct: 108 QSRKRRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVDHLKTLHAR 167
Query: 63 EVDDLS 68
+DD S
Sbjct: 168 GLDDAS 173
>gi|291388752|ref|XP_002710904.1| PREDICTED: inhibitor of DNA binding 1-like [Oryctolagus cuniculus]
Length = 154
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ ++
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSEAEVGTP 117
Query: 70 ---------RLSELLASIDSNSAEAAIIRS 90
LS L I + +AEAA + +
Sbjct: 118 GGRGLPVRAPLSTLNGEISALTAEAACVPA 147
>gi|223944371|gb|ACN26269.1| unknown [Zea mays]
gi|413918769|gb|AFW58701.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413918770|gb|AFW58702.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 161
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 1 MSSRRSRS---RQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
MSS++ R+ R + + D+IG+ V+ LQQL+ K + +LQE YI
Sbjct: 40 MSSKKPRNASPRLAPVSPKEKKDKIGERVAALQQLVSPF-----GKTDTASVLQEASGYI 94
Query: 58 RSLHREVDDLS 68
+ LH++++ LS
Sbjct: 95 KFLHQQLEVLS 105
>gi|125560356|gb|EAZ05804.1| hypothetical protein OsI_28041 [Oryza sativa Indica Group]
Length = 444
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 4 RRSRSRQSSGVS---RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
++SR+ S + ++ +++GD V+ LQQL+ K + +L ET +YI+ L
Sbjct: 312 KKSRTGTPSALPTTFKVRKEKLGDRVTALQQLVSPF-----GKTDTASVLHETIEYIKFL 366
Query: 61 HREVDDLS 68
H +V LS
Sbjct: 367 HDQVGALS 374
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELL 75
R+ +I + + KLQ L+P + + S +L ET +Y++SL +V +L++ +++L
Sbjct: 19 RVRRTRISERMKKLQDLVPNM----EKTTNTSDMLDETVEYVKSLQMKVKELTETIAQLK 74
Query: 76 AS 77
A+
Sbjct: 75 AA 76
>gi|413918765|gb|AFW58697.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 184
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
D+IG+ V+ LQQL+ K + +LQE YI+ LH++++ LS
Sbjct: 111 DKIGERVAALQQLVSPF-----GKTDTASVLQEASGYIKFLHQQLEVLS 154
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 5 RSRSRQSSG----VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
R+RS Q++ R+ ++I + + LQ L+P S + + +L E +Y++SL
Sbjct: 266 RARSGQATNSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSL 321
Query: 61 HREVDDLSDRLSELLASIDSN 81
R+V+ LS +LS + ++D N
Sbjct: 322 QRQVEFLSMKLSAVNPALDFN 342
>gi|413918766|gb|AFW58698.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 210
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 20 DQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
D+IG+ V+ LQQL+ K + +LQE YI+ LH++++ LS
Sbjct: 111 DKIGERVAALQQLVSPF-----GKTDTASVLQEASGYIKFLHQQLEVLS 154
>gi|298155798|gb|ADI58830.1| DNA-binding protein inhibitor [Chiloscyllium plagiosum]
Length = 135
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDD 66
+S YD G +KL++L+P L + KVS +ILQ DYI L E+DD
Sbjct: 43 MSMFLYDMNG-CYTKLKELVPTLPQNK--KVSKVEILQHVIDYIWDLQLELDD 92
>gi|395750978|ref|XP_002829106.2| PREDICTED: upstream stimulatory factor 2 [Pongo abelii]
Length = 282
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 172 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 230
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 231 QRMQETFKE 239
>gi|158285665|ref|XP_564803.3| AGAP007450-PA [Anopheles gambiae str. PEST]
gi|157020102|gb|EAL41793.3| AGAP007450-PA [Anopheles gambiae str. PEST]
Length = 417
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 6 SRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRR-SDKVSASKILQETCDYIRSLH-RE 63
SR R+ + + D+I +++L++L+P ++ S K+ ++ILQ T D++++LH R
Sbjct: 84 SRKRRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVDHLKALHARG 143
Query: 64 VDDLS 68
+DD S
Sbjct: 144 LDDAS 148
>gi|218199576|gb|EEC82003.1| hypothetical protein OsI_25950 [Oryza sativa Indica Group]
Length = 562
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 2 SSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
S + S SS S++ ++GD ++ LQQ++ K + +L E +YI+ LH
Sbjct: 442 SKHEATSPTSSLKSQVPKVKLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKWLH 496
Query: 62 REVDDLSDRLSELLASIDSNS 82
+V LSD + +S D N+
Sbjct: 497 EQVQLLSDPYMKSSSSKDYNA 517
>gi|301771025|ref|XP_002920933.1| PREDICTED: upstream stimulatory factor 2-like [Ailuropoda
melanoleuca]
Length = 333
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 223 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 281
Query: 65 DDLSDRLSE----------LLASIDSNSAEAAIIRSLL 92
+ + E L I+ E A++R+ L
Sbjct: 282 QRMQETFKEAERLQMDNELLRQQIEELKNENAVLRAQL 319
>gi|4507847|ref|NP_003358.1| upstream stimulatory factor 2 isoform 1 [Homo sapiens]
gi|2833271|sp|Q15853.1|USF2_HUMAN RecName: Full=Upstream stimulatory factor 2; AltName: Full=Class B
basic helix-loop-helix protein 12; Short=bHLHb12;
AltName: Full=FOS-interacting protein; Short=FIP;
AltName: Full=Major late transcription factor 2;
AltName: Full=Upstream transcription factor 2
gi|1279511|emb|CAA62341.1| USF2a, USF2b protein [Homo sapiens]
gi|1806094|emb|CAA68942.1| USF2 [Homo sapiens]
gi|1905919|gb|AAB51179.1| upstream stimulatory factor 2 [Homo sapiens]
gi|29612623|gb|AAH49821.1| Upstream transcription factor 2, c-fos interacting [Homo sapiens]
gi|261859850|dbj|BAI46447.1| upstream transcription factor 2, c-fos interacting [synthetic
construct]
gi|410218104|gb|JAA06271.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
gi|410249530|gb|JAA12732.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
gi|410249534|gb|JAA12734.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
gi|410296832|gb|JAA27016.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
Length = 346
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P S + +L E +Y++SL
Sbjct: 262 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 317
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 318 RQVEFLSMKLASVNPTLDFN 337
>gi|402905160|ref|XP_003915391.1| PREDICTED: upstream stimulatory factor 2, partial [Papio anubis]
Length = 343
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 233 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 291
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 292 QRMQETFKE 300
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P S + +L E +Y++SL
Sbjct: 262 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 317
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 318 RQVEFLSMKLASVNPTLDFN 337
>gi|340711307|ref|XP_003394219.1| PREDICTED: Williams-Beuren syndrome chromosomal region 14
protein-like [Bombus terrestris]
Length = 1011
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 SRRSRSRQSSGVSRISYDQ-----IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
S R + ++ V I +Q I + L LIP+L + K+S + +LQ+ DYI
Sbjct: 799 SERGQYKEQRRVGHIHAEQKRRYNIKNGFDMLHNLIPQLNQNPNTKMSKAAMLQKGADYI 858
Query: 58 RSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
R L E + L + + L I+ + + +S+L
Sbjct: 859 RQLRAERNQLKEEMDTLRHQIECLNTSISNCQSML 893
>gi|49168494|emb|CAG38742.1| USF2 [Homo sapiens]
Length = 346
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|350411942|ref|XP_003489496.1| PREDICTED: Williams-Beuren syndrome chromosomal region 14
protein-like [Bombus impatiens]
Length = 1001
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 SRRSRSRQSSGVSRISYDQ-----IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
S R + ++ V I +Q I + L LIP+L + K+S + +LQ+ DYI
Sbjct: 802 SERGQYKEQRRVGHIHAEQKRRYNIKNGFDMLHSLIPQLNQNPNTKMSKAAMLQKGADYI 861
Query: 58 RSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
R L E + L + + L I+ + + +S+L
Sbjct: 862 RQLRAERNQLKEEMDTLRHQIECLNTSISNCQSML 896
>gi|383865233|ref|XP_003708079.1| PREDICTED: carbohydrate-responsive element-binding protein-like
[Megachile rotundata]
Length = 1046
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 29 LQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAII 88
L LIP+L + K+S + +LQ+ DYIR L E + L + + L I+ + +
Sbjct: 865 LHSLIPQLSQNPNTKLSKAAMLQKGADYIRQLRAERNQLKEEMDSLRNQIECLNTSISNC 924
Query: 89 RSLL 92
+S+L
Sbjct: 925 QSML 928
>gi|344244191|gb|EGW00295.1| DNA-binding protein inhibitor ID-1 [Cricetulus griseus]
Length = 157
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 58 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 110
>gi|334328594|ref|XP_003341097.1| PREDICTED: upstream stimulatory factor 2-like [Monodelphis
domestica]
Length = 357
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 247 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNTDNS-KTGASKGGILSKACDYIRELRQTN 305
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 306 QRMQETFKE 314
>gi|417399333|gb|JAA46689.1| Putative helix loop helix transcription factor eb [Desmodus
rotundus]
Length = 346
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE----------LLASIDSNSAEAAIIRSLL 92
+ + E L I+ E A++R+ L
Sbjct: 295 QRMQETFKEAERLQMDNELLRQQIEELKNENAVLRAQL 332
>gi|311257380|ref|XP_003127089.1| PREDICTED: upstream stimulatory factor 2 isoform 1 [Sus scrofa]
Length = 346
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE----------LLASIDSNSAEAAIIRSLL 92
+ + E L I+ E A++R+ L
Sbjct: 295 QRMQETFKEAERLQMDNELLRQQIEELKNENAVLRAQL 332
>gi|296477787|tpg|DAA19902.1| TPA: upstream stimulatory factor 2 [Bos taurus]
Length = 338
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNAD-SSKTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|326489649|dbj|BAK01805.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514422|dbj|BAJ96198.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 2 SSRRSRSRQSSGVS--RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRS 59
++++ R+ S + ++ +++GD V+ LQQL+ K + +L E YIR
Sbjct: 210 AAKKPRTETPSPMPTFKVRKEKLGDRVTALQQLVSPF-----GKTDTASVLHEAIGYIRF 264
Query: 60 LHREVDDLS 68
LH +V LS
Sbjct: 265 LHEQVASLS 273
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDR 70
R+ +I D + KLQ+L+P + + + + +L+E DY++ L R++ +L+++
Sbjct: 204 RVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVDYVKFLQRQIQELTEQ 254
>gi|410300594|gb|JAA28897.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Pan troglodytes]
Length = 149
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 114
>gi|151556999|gb|AAI49553.1| Upstream transcription factor 2, c-fos interacting [Bos taurus]
Length = 346
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|47420475|gb|AAT27442.1| upstream stimulatory factor 2 [Gallus gallus]
Length = 305
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDY+R L +
Sbjct: 194 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYVRELRQSN 252
Query: 65 DDLSDRLSE----------LLASIDSNSAEAAIIRSLL 92
L + E L ++ +E A++R+ L
Sbjct: 253 QRLQETFKEAERLQMDNDLLRQQVEELQSENAVLRAQL 290
>gi|729805|sp|P41135.1|ID1_RAT RecName: Full=DNA-binding protein inhibitor ID-1; AltName:
Full=Inhibitor of DNA binding 1
gi|516115|gb|AAA20403.1| Id protein [Rattus norvegicus]
gi|149031023|gb|EDL86050.1| inhibitor of DNA binding 1, isoform CRA_b [Rattus norvegicus]
Length = 164
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 55 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 107
>gi|414886514|tpg|DAA62528.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 403
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 2 SSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
S S +Q+S + ++ ++GD ++ LQQ++ K + +L E +YI+ LH
Sbjct: 279 SPTSSSLKQASQLPKV---KLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKWLH 330
Query: 62 REVDDLSDRLSELLASIDSNS 82
+V LSD + +S D N+
Sbjct: 331 EQVQLLSDPYMKTSSSKDYNA 351
>gi|384949246|gb|AFI38228.1| upstream stimulatory factor 2 isoform 1 [Macaca mulatta]
gi|387542140|gb|AFJ71697.1| upstream stimulatory factor 2 isoform 1 [Macaca mulatta]
Length = 346
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|222637011|gb|EEE67143.1| hypothetical protein OsJ_24199 [Oryza sativa Japonica Group]
Length = 457
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 2 SSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
S + S SS S++ ++GD ++ LQQ++ K + +L E +YI+ LH
Sbjct: 330 SKHEATSPTSSLKSQVPKVKLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKWLH 384
Query: 62 REVDDLSDRLSELLASIDSNS 82
+V LSD + +S D N+
Sbjct: 385 EQVQLLSDPYMKSSSSKDYNA 405
>gi|359318841|ref|XP_855488.3| PREDICTED: upstream stimulatory factor 2 [Canis lupus familiaris]
Length = 430
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 320 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 378
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 379 QRMQETFKE 387
>gi|307180735|gb|EFN68625.1| MLX-interacting protein [Camponotus floridanus]
Length = 1015
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 SRRSRSRQSSGVSRISYDQ-----IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
S R + ++ V I +Q I + L LIP+L + K+S + +LQ+ DYI
Sbjct: 816 SERGQYKEQRRVGHIHAEQKRRYNIKNGFDMLHSLIPQLSQNSNAKLSKAAMLQKGADYI 875
Query: 58 RSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
R L E + L + + L I+ + + +S+L
Sbjct: 876 RQLRAERNQLKEEMDSLRHQIECLNTSISNCQSML 910
>gi|328780183|ref|XP_394429.4| PREDICTED: hypothetical protein LOC410953 [Apis mellifera]
Length = 1040
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 29 LQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAII 88
L LIP+L + K+S + +LQ+ DYIR L E + L + + L I+ + +
Sbjct: 859 LHSLIPQLNQNPNTKMSKAAMLQKGADYIRQLRAERNQLKEEMDSLRHQIECLNTSISNC 918
Query: 89 RSLL 92
+S+L
Sbjct: 919 QSML 922
>gi|395846934|ref|XP_003796143.1| PREDICTED: upstream stimulatory factor 2 [Otolemur garnettii]
Length = 346
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|255573099|ref|XP_002527479.1| transcription factor, putative [Ricinus communis]
gi|223533119|gb|EEF34877.1| transcription factor, putative [Ricinus communis]
Length = 239
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 11 SSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDR 70
S+G +I +++G+ ++ LQQL+ K + +L E YIR LH +V L
Sbjct: 124 STGQPKIRKEKLGERINALQQLVSPF-----GKTDTASVLHEAMGYIRFLHDQVQVLCSP 178
Query: 71 LSELLASIDSNSAEA 85
+ ++ N E
Sbjct: 179 YLQHQPEVEENGEEP 193
>gi|2827752|sp|P20067.3|ID1_MOUSE RecName: Full=DNA-binding protein inhibitor ID-1; AltName:
Full=Inhibitor of DNA binding 1
gi|1244793|gb|AAC52760.1| Id1B [Mus musculus]
Length = 168
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 55 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 107
>gi|12842342|dbj|BAB25564.1| unnamed protein product [Mus musculus]
Length = 168
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 55 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 107
>gi|29436750|gb|AAH49784.1| Usf1 protein [Mus musculus]
Length = 296
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|148674040|gb|EDL05987.1| inhibitor of DNA binding 1, isoform CRA_b [Mus musculus]
Length = 197
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 84 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 136
>gi|74147177|dbj|BAE27494.1| unnamed protein product [Mus musculus]
Length = 343
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 233 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 291
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 292 QRMQETFKE 300
>gi|354480309|ref|XP_003502350.1| PREDICTED: hypothetical protein LOC100774183 [Cricetulus griseus]
Length = 287
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD---- 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 194 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESEVGTA 250
Query: 70 ---------RLSELLASIDSNSAEAAII 88
LS L I + +AEAA +
Sbjct: 251 GGRGLPVRAPLSTLNGEISALAAEAACV 278
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P S + +L E +Y++SL
Sbjct: 319 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 374
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 375 RQVEFLSMKLASVNPTLDFN 394
>gi|242088389|ref|XP_002440027.1| hypothetical protein SORBIDRAFT_09g024720 [Sorghum bicolor]
gi|241945312|gb|EES18457.1| hypothetical protein SORBIDRAFT_09g024720 [Sorghum bicolor]
Length = 344
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L E +YIR LH +V LS
Sbjct: 235 KVRKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIRFLHDQVASLS 282
>gi|242080775|ref|XP_002445156.1| hypothetical protein SORBIDRAFT_07g004980 [Sorghum bicolor]
gi|241941506|gb|EES14651.1| hypothetical protein SORBIDRAFT_07g004980 [Sorghum bicolor]
Length = 411
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 RRSRSRQSSGVS--RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
++SR+ S + ++ +++GD ++ LQQL+ K + +L ET +YI+ LH
Sbjct: 286 KKSRTGTPSPLPTFKVRKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFLH 340
Query: 62 REVDDLS 68
+V LS
Sbjct: 341 EQVGSLS 347
>gi|380812394|gb|AFE78071.1| DNA-binding protein inhibitor ID-1 isoform b [Macaca mulatta]
Length = 148
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 113
>gi|31317297|ref|NP_851998.1| DNA-binding protein inhibitor ID-1 isoform b [Homo sapiens]
gi|1042080|gb|AAB35038.1| transcription regulator helix-loop-helix protein [Homo sapiens]
gi|1816513|gb|AAC13883.1| helix-loop-helix protein Id-1' [Homo sapiens]
gi|208966550|dbj|BAG73289.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [synthetic construct]
gi|410355555|gb|JAA44381.1| inhibitor of DNA binding 1, dominant negative helix-loop-helix
protein [Pan troglodytes]
Length = 149
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 62 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 114
>gi|403292772|ref|XP_003937405.1| PREDICTED: upstream stimulatory factor 2, partial [Saimiri
boliviensis boliviensis]
Length = 332
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 222 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 280
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 281 QRMQETFKE 289
>gi|281354270|gb|EFB29854.1| hypothetical protein PANDA_009747 [Ailuropoda melanoleuca]
Length = 326
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 216 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 274
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 275 QRMQETFKE 283
>gi|124504632|gb|AAI28736.1| Upstream transcription factor 2 [Rattus norvegicus]
Length = 346
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|47564070|ref|NP_001001162.1| upstream stimulatory factor 2 [Bos taurus]
gi|34420907|gb|AAQ18903.1| upstream stimulatory factor 2 [Bos taurus]
Length = 346
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNAD-SSKTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|6755945|ref|NP_035810.1| upstream stimulatory factor 2 [Mus musculus]
gi|13592125|ref|NP_112401.1| upstream stimulatory factor 2 [Rattus norvegicus]
gi|2842675|sp|Q64705.1|USF2_MOUSE RecName: Full=Upstream stimulatory factor 2; AltName: Full=Major
late transcription factor 2; AltName: Full=Upstream
transcription factor 2
gi|83305812|sp|Q63665.2|USF2_RAT RecName: Full=Upstream stimulatory factor 2; AltName: Full=Major
late transcription factor 2; AltName: Full=Upstream
transcription factor 2
gi|25358132|pir||JC7638 upstream stimulatory factor 2, USF2FL isoform - rat
gi|402874|gb|AAA20492.1| USF2 [Mus musculus]
gi|595479|gb|AAB60674.1| USF2 [Mus musculus]
gi|11994802|dbj|BAB19964.1| USF2 [Rattus norvegicus]
gi|12246832|dbj|BAB20993.1| transcription factor USF2 [Rattus norvegicus]
gi|53236924|gb|AAH82995.1| Upstream transcription factor 2 [Mus musculus]
Length = 346
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 236 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 294
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 295 QRMQETFKE 303
>gi|194384786|dbj|BAG59553.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 234 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 292
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 293 QRMQETFKE 301
>gi|195034088|ref|XP_001988823.1| GH10367 [Drosophila grimshawi]
gi|193904823|gb|EDW03690.1| GH10367 [Drosophila grimshawi]
Length = 8390
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7794 LGRLADKFRNVDPTVRSRRHLEDTKNAIQELREESNELKSSHKEIEALSKSILTFLGEVH 7853
Query: 80 SNSAEA 85
SAEA
Sbjct: 7854 KPSAEA 7859
>gi|298228980|ref|NP_001177174.1| upstream stimulatory factor 1 [Sus scrofa]
Length = 310
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|291411986|ref|XP_002722281.1| PREDICTED: upstream stimulatory factor 2 [Oryctolagus cuniculus]
Length = 319
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 209 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 267
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 268 QRMQETFKE 276
>gi|471125|dbj|BAA02989.1| Id-1H' [Homo sapiens]
Length = 148
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 113
>gi|380797705|gb|AFE70728.1| upstream stimulatory factor 2 isoform 1, partial [Macaca mulatta]
Length = 330
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 220 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 278
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 279 QRMQETFKE 287
>gi|351714246|gb|EHB17165.1| DNA-binding protein inhibitor ID-1 [Heterocephalus glaber]
Length = 151
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSD 69
V+ + YD G S+L++L+P L R KVS +ILQ DYIR L E++ S+
Sbjct: 58 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIRDLQLELNSESE 110
>gi|348561644|ref|XP_003466622.1| PREDICTED: upstream stimulatory factor 2-like [Cavia porcellus]
Length = 344
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 234 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 292
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 293 QRMQETFKE 301
>gi|148707136|gb|EDL39083.1| upstream transcription factor 1, isoform CRA_b [Mus musculus]
Length = 317
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 221 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 278
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 279 ---NHRLSEELQGLDQLQLDNDVLR 300
>gi|354506619|ref|XP_003515357.1| PREDICTED: upstream stimulatory factor 2-like [Cricetulus griseus]
Length = 212
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 96 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 154
Query: 65 DDLSDRLSE 73
L + E
Sbjct: 155 QRLQETFKE 163
>gi|297607204|ref|NP_001059610.2| Os07g0471900 [Oryza sativa Japonica Group]
gi|255677757|dbj|BAF21524.2| Os07g0471900 [Oryza sativa Japonica Group]
Length = 436
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 2 SSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
S + S SS S++ ++GD ++ LQQ++ K + +L E +YI+ LH
Sbjct: 309 SKHEATSPTSSLKSQVPKVKLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKWLH 363
Query: 62 REVDDLSDRLSELLASIDSNS 82
+V LSD + +S D N+
Sbjct: 364 EQVQLLSDPYMKSSSSKDYNA 384
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P S + +L E +Y++SL
Sbjct: 370 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 425
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 426 RQVEFLSMKLASVNPTLDFN 445
>gi|307195801|gb|EFN77615.1| MLX-interacting protein [Harpegnathos saltator]
Length = 1016
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 3 SRRSRSRQSSGVSRISYDQ-----IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
S R + ++ V I +Q I + L LIP+L + K+S + +LQ+ DYI
Sbjct: 804 SERGQYKEQRRVGHIHAEQKRRYNIKNGFDMLHSLIPQLNQNPNTKLSKAAMLQKGADYI 863
Query: 58 RSLHREVDDLSDRLSELLASID 79
R L E + + + + L I+
Sbjct: 864 RQLRAERNQMKEEMDNLKQQIE 885
>gi|410904433|ref|XP_003965696.1| PREDICTED: upstream stimulatory factor 2-like [Takifugu rubripes]
Length = 303
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 193 RRAQHNEVERRRRDKINNWIVTLSKIIPDC-NMDSTKTGASKGGILSKACDYIRELRQNN 251
Query: 65 DDLSDRLSEL 74
L + L E+
Sbjct: 252 QRLQESLKEV 261
>gi|90399083|emb|CAJ86024.1| B0808H03.1 [Oryza sativa Indica Group]
gi|90399269|emb|CAH68071.1| H0105C05.9 [Oryza sativa Indica Group]
Length = 440
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 330 KVRKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFLHDQVGALS 377
>gi|148692028|gb|EDL23975.1| upstream transcription factor 2, isoform CRA_a [Mus musculus]
Length = 326
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 216 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 274
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 275 QRMQETFKE 283
>gi|413916948|gb|AFW56880.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 426
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 309 KVRKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFLHDQVGSLS 356
>gi|197102538|ref|NP_001125280.1| upstream stimulatory factor 1 [Pongo abelii]
gi|55727542|emb|CAH90526.1| hypothetical protein [Pongo abelii]
Length = 310
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-STESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|74006163|ref|XP_545763.2| PREDICTED: upstream stimulatory factor 1 isoform 1 [Canis lupus
familiaris]
Length = 310
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|130503107|ref|NP_001076104.1| upstream stimulatory factor 1 [Oryctolagus cuniculus]
gi|3915202|sp|O02818.1|USF1_RABIT RecName: Full=Upstream stimulatory factor 1; AltName: Full=Major
late transcription factor 1
gi|2197097|gb|AAC48764.1| upstream stimulatory factor 1a [Oryctolagus cuniculus]
Length = 310
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|410983411|ref|XP_003998033.1| PREDICTED: upstream stimulatory factor 2, partial [Felis catus]
Length = 307
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 197 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 255
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 256 QRMQETFKE 264
>gi|296229409|ref|XP_002760283.1| PREDICTED: upstream stimulatory factor 1 [Callithrix jacchus]
Length = 298
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 188 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 245
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 246 ---NHRLSEELQGLDQLQLDNDVLR 267
>gi|348519578|ref|XP_003447307.1| PREDICTED: upstream stimulatory factor 2-like [Oreochromis
niloticus]
Length = 327
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDD 66
R Q + V R D+I + + L ++IP+ S IL + CDYIR L +
Sbjct: 218 RRAQHNEVERRRRDKINNWIVTLSKIIPDCSIDSRTGASKGGILSKACDYIRELRQNNQR 277
Query: 67 LSDRLSEL 74
L D E+
Sbjct: 278 LQDSYKEV 285
>gi|432910439|ref|XP_004078364.1| PREDICTED: upstream stimulatory factor 2-like isoform 2 [Oryzias
latipes]
Length = 318
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 208 RRAQHNEVERRRRDKINNWIVTLSKIIPDC-NMDSTKTGASKGGILSKACDYIRELRQSN 266
Query: 65 DDLSDRLSEL 74
L + L E+
Sbjct: 267 QRLQESLKEV 276
>gi|344286988|ref|XP_003415238.1| PREDICTED: upstream stimulatory factor 1 [Loxodonta africana]
Length = 310
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|301786767|ref|XP_002928795.1| PREDICTED: upstream stimulatory factor 1-like [Ailuropoda
melanoleuca]
Length = 310
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|125549865|gb|EAY95687.1| hypothetical protein OsI_17552 [Oryza sativa Indica Group]
Length = 439
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 329 KVRKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFLHDQVGALS 376
>gi|115460766|ref|NP_001053983.1| Os04g0631600 [Oryza sativa Japonica Group]
gi|21741062|emb|CAD41686.1| OSJNBb0015D13.17 [Oryza sativa Japonica Group]
gi|113565554|dbj|BAF15897.1| Os04g0631600 [Oryza sativa Japonica Group]
gi|125591747|gb|EAZ32097.1| hypothetical protein OsJ_16289 [Oryza sativa Japonica Group]
Length = 437
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 327 KVRKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFLHDQVGALS 374
>gi|6005934|ref|NP_009053.1| upstream stimulatory factor 1 isoform 1 [Homo sapiens]
gi|444909174|ref|NP_001263302.1| upstream stimulatory factor 1 isoform 1 [Homo sapiens]
gi|395825209|ref|XP_003785833.1| PREDICTED: upstream stimulatory factor 1 [Otolemur garnettii]
gi|397481341|ref|XP_003811906.1| PREDICTED: upstream stimulatory factor 1 isoform 1 [Pan paniscus]
gi|397481343|ref|XP_003811907.1| PREDICTED: upstream stimulatory factor 1 isoform 2 [Pan paniscus]
gi|402856849|ref|XP_003892992.1| PREDICTED: upstream stimulatory factor 1 isoform 2 [Papio anubis]
gi|426332381|ref|XP_004027784.1| PREDICTED: upstream stimulatory factor 1 isoform 1 [Gorilla gorilla
gorilla]
gi|426332383|ref|XP_004027785.1| PREDICTED: upstream stimulatory factor 1 isoform 2 [Gorilla gorilla
gorilla]
gi|137170|sp|P22415.1|USF1_HUMAN RecName: Full=Upstream stimulatory factor 1; AltName: Full=Class B
basic helix-loop-helix protein 11; Short=bHLHb11;
AltName: Full=Major late transcription factor 1
gi|37615|emb|CAA39201.1| upstream stimulatory factor [Homo sapiens]
gi|4586912|dbj|BAA76541.1| USF1 [Homo sapiens]
gi|23273795|gb|AAH35505.1| Upstream transcription factor 1 [Homo sapiens]
gi|46361512|gb|AAS89301.1| upstream transcription factor 1 [Homo sapiens]
gi|61364350|gb|AAX42529.1| upstream transcription factor 1 [synthetic construct]
gi|117644278|emb|CAL37633.1| hypothetical protein [synthetic construct]
gi|117646488|emb|CAL38711.1| hypothetical protein [synthetic construct]
gi|119573060|gb|EAW52675.1| upstream transcription factor 1, isoform CRA_a [Homo sapiens]
gi|189054732|dbj|BAG37391.1| unnamed protein product [Homo sapiens]
gi|208968027|dbj|BAG73852.1| upstream transcription factor 1 [synthetic construct]
gi|380816214|gb|AFE79981.1| upstream stimulatory factor 1 isoform 1 [Macaca mulatta]
gi|383421309|gb|AFH33868.1| upstream stimulatory factor 1 isoform 1 [Macaca mulatta]
gi|384949244|gb|AFI38227.1| upstream stimulatory factor 1 isoform 1 [Macaca mulatta]
gi|410209684|gb|JAA02061.1| upstream transcription factor 1 [Pan troglodytes]
gi|410248092|gb|JAA12013.1| upstream transcription factor 1 [Pan troglodytes]
gi|410304040|gb|JAA30620.1| upstream transcription factor 1 [Pan troglodytes]
gi|410333849|gb|JAA35871.1| upstream transcription factor 1 [Pan troglodytes]
Length = 310
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|60810083|gb|AAX36097.1| upstream transcription factor 1 [synthetic construct]
Length = 311
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|18043957|gb|AAH19729.1| Usf2 protein [Mus musculus]
gi|149056264|gb|EDM07695.1| upstream transcription factor 2, isoform CRA_a [Rattus norvegicus]
gi|149056265|gb|EDM07696.1| upstream transcription factor 2, isoform CRA_a [Rattus norvegicus]
gi|149056266|gb|EDM07697.1| upstream transcription factor 2, isoform CRA_a [Rattus norvegicus]
Length = 148
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLH--- 61
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 38 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 96
Query: 62 ---REVDDLSDRL---SELL-ASIDSNSAEAAIIRSLL 92
+E ++RL +ELL I+ E A++R+ L
Sbjct: 97 QRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQL 134
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P S + +L E +Y++SL
Sbjct: 260 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 315
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 316 RQVEFLSMKLASVNPTLDFN 335
>gi|432883788|ref|XP_004074353.1| PREDICTED: upstream stimulatory factor 2-like [Oryzias latipes]
Length = 305
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDD 66
R Q + V R D+I + + L +LIP+ S IL + CDYIR L +
Sbjct: 196 RRAQHNEVERRRRDKINNWIVTLSKLIPDCSVDSRSAASKGGILSKACDYIRELRQNNQR 255
Query: 67 LSDRLSEL 74
L + E+
Sbjct: 256 LQESCKEV 263
>gi|118343888|ref|NP_001071765.1| transcription factor protein [Ciona intestinalis]
gi|70570228|dbj|BAE06560.1| transcription factor protein [Ciona intestinalis]
Length = 873
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 27 SKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
++LQ LIP L S+ KVS + I+ + YI+++ E +S+ + L +D
Sbjct: 688 TRLQSLIPGLTSQTVSKVSKATIMSKAAQYIKTMQNERLKMSEEIQGLKKEVD 740
>gi|414585296|tpg|DAA35867.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 463
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 344 KVRKEKLGDRITALQQLVAPF-----GKTDTASVLHETIEYIKFLHDQVGVLS 391
>gi|410033989|ref|XP_003949666.1| PREDICTED: LOW QUALITY PROTEIN: upstream stimulatory factor 1 [Pan
troglodytes]
Length = 310
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|293336192|ref|NP_001169880.1| uncharacterized protein LOC100383774 [Zea mays]
gi|224032155|gb|ACN35153.1| unknown [Zea mays]
Length = 421
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD ++ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 344 KVRKEKLGDRITALQQLVAPF-----GKTDTASVLHETIEYIKFLHDQVGVLS 391
>gi|403294046|ref|XP_003938016.1| PREDICTED: upstream stimulatory factor 1 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403294048|ref|XP_003938017.1| PREDICTED: upstream stimulatory factor 1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 310
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|22093671|dbj|BAC06965.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|50510046|dbj|BAD30671.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
Length = 434
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 2 SSRRSRSRQSSGVSRISYDQI--GDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRS 59
S+++S+ +S S + ++ GD ++ LQQ++ K + +L E +YI+
Sbjct: 305 STKKSKHEATSPTSSLKVPKVKLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKW 359
Query: 60 LHREVDDLSDRLSELLASIDSNS 82
LH +V LSD + +S D N+
Sbjct: 360 LHEQVQLLSDPYMKSSSSKDYNA 382
>gi|1279663|emb|CAA62338.1| USF2a, USF2b protein [Rattus norvegicus]
Length = 291
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 181 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 239
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 240 QRMQETFKE 248
>gi|432910437|ref|XP_004078363.1| PREDICTED: upstream stimulatory factor 2-like isoform 1 [Oryzias
latipes]
Length = 305
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 195 RRAQHNEVERRRRDKINNWIVTLSKIIPDC-NMDSTKTGASKGGILSKACDYIRELRQSN 253
Query: 65 DDLSDRLSEL 74
L + L E+
Sbjct: 254 QRLQESLKEV 263
>gi|281352160|gb|EFB27744.1| hypothetical protein PANDA_018845 [Ailuropoda melanoleuca]
Length = 307
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 197 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 254
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 255 ---NHRLSEELQGLDQLQLDNDVLR 276
>gi|410986669|ref|XP_003999632.1| PREDICTED: upstream stimulatory factor 1 isoform 1 [Felis catus]
Length = 310
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|198473987|ref|XP_002132604.1| GA25805 [Drosophila pseudoobscura pseudoobscura]
gi|198138199|gb|EDY70006.1| GA25805 [Drosophila pseudoobscura pseudoobscura]
Length = 18482
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7770 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIETLSKSILTFLGEVH 7829
Query: 80 SNSAEA 85
SAEA
Sbjct: 7830 KPSAEA 7835
>gi|414590216|tpg|DAA40787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 558
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 1 MSSRRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSL 60
+SS S + SS V ++ ++GD ++ LQQ++ K + +L E +YI+ L
Sbjct: 432 VSSPTSSLKASSQVPKV---KLGDKITALQQIVSPF-----GKTDTASVLYEAINYIKWL 483
Query: 61 HREVDDLSD 69
H +V LSD
Sbjct: 484 HEQVQLLSD 492
>gi|332219266|ref|XP_003258777.1| PREDICTED: upstream stimulatory factor 1 isoform 1 [Nomascus
leucogenys]
gi|441635087|ref|XP_004089891.1| PREDICTED: upstream stimulatory factor 1 isoform 2 [Nomascus
leucogenys]
Length = 310
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|332020853|gb|EGI61251.1| MLX-interacting protein [Acromyrmex echinatior]
Length = 1013
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 3 SRRSRSRQSSGVSRISYDQ-----IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYI 57
S R + ++ V I +Q I + L LIP+L + K+S + +L + DYI
Sbjct: 800 SERGQYKEQRRVGHIHAEQKRRYNIKNGFDMLHSLIPQLSQNSNTKLSKAAMLHKGADYI 859
Query: 58 RSLHREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
R L E L D + L I+ + + +S+L
Sbjct: 860 RQLKAERHQLKDEMDSLRQQIECLNMSISNCQSML 894
>gi|145683820|gb|ABP88825.1| upstream stimulatory factor 1 isoform 1 [Sus scrofa]
gi|149132070|gb|ABR20897.1| upstream stimulatory factor 1 [Sus scrofa]
Length = 317
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|47564068|ref|NP_001001161.1| upstream stimulatory factor 1 [Bos taurus]
gi|75063319|sp|Q6XBT4.1|USF1_BOVIN RecName: Full=Upstream stimulatory factor 1
gi|37933780|gb|AAP43041.1| upstream stimulatory factor 1 [Bos taurus]
gi|92098342|gb|AAI14685.1| Upstream transcription factor 1 [Bos taurus]
gi|296489843|tpg|DAA31956.1| TPA: upstream stimulatory factor 1 [Bos taurus]
Length = 310
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|344279816|ref|XP_003411682.1| PREDICTED: DNA-binding protein inhibitor ID-1-like [Loxodonta
africana]
Length = 154
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 14 VSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVD 65
V+ + YD G S+L++L+P L R KVS +ILQ DYI L E+D
Sbjct: 61 VNVLLYDMNG-CYSRLKELVPTLPQNR--KVSKVEILQHVIDYIWDLQLELD 109
>gi|242074462|ref|XP_002447167.1| hypothetical protein SORBIDRAFT_06g029680 [Sorghum bicolor]
gi|241938350|gb|EES11495.1| hypothetical protein SORBIDRAFT_06g029680 [Sorghum bicolor]
Length = 454
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 16 RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLS 68
++ +++GD V+ LQQL+ K + +L ET +YI+ LH +V LS
Sbjct: 336 KVRKEKLGDRVTALQQLVAPF-----GKTDTASVLHETIEYIKFLHDQVGVLS 383
>gi|195576698|ref|XP_002078212.1| GD23326 [Drosophila simulans]
gi|194190221|gb|EDX03797.1| GD23326 [Drosophila simulans]
Length = 2547
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 1256 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 1315
Query: 80 SNSAEA 85
SAEA
Sbjct: 1316 KPSAEA 1321
>gi|195118441|ref|XP_002003745.1| GI21368 [Drosophila mojavensis]
gi|193914320|gb|EDW13187.1| GI21368 [Drosophila mojavensis]
Length = 681
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 85 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNELKSSHKEIETLSKSILTFLGEVH 144
Query: 80 SNSAEA 85
SAEA
Sbjct: 145 KPSAEA 150
>gi|444509601|gb|ELV09357.1| Upstream stimulatory factor 2, partial [Tupaia chinensis]
Length = 593
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 483 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 541
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 542 QRMQETFKE 550
>gi|320544538|ref|NP_001188692.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster]
gi|318068307|gb|ADV36942.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster]
Length = 8382
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7786 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7845
Query: 80 SNSAEA 85
SAEA
Sbjct: 7846 KPSAEA 7851
>gi|395535320|ref|XP_003769676.1| PREDICTED: upstream stimulatory factor 1 [Sarcophilus harrisii]
Length = 310
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S + K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMENTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNKVLR 279
>gi|351710733|gb|EHB13652.1| Upstream stimulatory factor 1, partial [Heterocephalus glaber]
Length = 307
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 197 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 254
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 255 ---NHRLSEELQGLDQLQLDNDVLR 276
>gi|195342674|ref|XP_002037925.1| GM18531 [Drosophila sechellia]
gi|194132775|gb|EDW54343.1| GM18531 [Drosophila sechellia]
Length = 8290
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7694 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7753
Query: 80 SNSAEA 85
SAEA
Sbjct: 7754 KPSAEA 7759
>gi|348561650|ref|XP_003466625.1| PREDICTED: upstream stimulatory factor 1-like [Cavia porcellus]
Length = 310
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|226492755|ref|NP_001152376.1| DNA binding protein [Zea mays]
gi|195655687|gb|ACG47311.1| DNA binding protein [Zea mays]
Length = 455
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 4 RRSRSRQSSGVS--RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
++SR + S + ++ +++GD V+ LQQL+ K + +L ET +YI+ LH
Sbjct: 325 KKSRLQTPSPLPTFKVRKEKVGDRVTALQQLVAPF-----GKTDTASVLHETIEYIKFLH 379
Query: 62 REVDDLS 68
+V LS
Sbjct: 380 DQVGVLS 386
>gi|194856553|ref|XP_001968775.1| GG25055 [Drosophila erecta]
gi|190660642|gb|EDV57834.1| GG25055 [Drosophila erecta]
Length = 8391
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7795 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7854
Query: 80 SNSAEA 85
SAEA
Sbjct: 7855 KPSAEA 7860
>gi|440893871|gb|ELR46487.1| Upstream stimulatory factor 1, partial [Bos grunniens mutus]
Length = 307
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 197 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 254
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 255 ---NHRLSEELQGLDQLQLDNDVLR 276
>gi|442626145|ref|NP_001260088.1| Muscle-specific protein 300, isoform J [Drosophila melanogaster]
gi|440213382|gb|AGB92624.1| Muscle-specific protein 300, isoform J [Drosophila melanogaster]
Length = 7962
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 3390 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 3449
Query: 80 SNSAEA 85
SAEA
Sbjct: 3450 KPSAEA 3455
>gi|334323839|ref|XP_001381670.2| PREDICTED: upstream stimulatory factor 1-like [Monodelphis
domestica]
Length = 310
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S + K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMENTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNEVLR 279
>gi|320544542|ref|NP_001188694.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster]
gi|318068309|gb|ADV36944.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster]
Length = 12345
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7786 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7845
Query: 80 SNSAEA 85
SAEA
Sbjct: 7846 KPSAEA 7851
>gi|442626149|ref|NP_001260090.1| Muscle-specific protein 300, isoform L [Drosophila melanogaster]
gi|440213384|gb|AGB92626.1| Muscle-specific protein 300, isoform L [Drosophila melanogaster]
Length = 12308
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7786 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7845
Query: 80 SNSAEA 85
SAEA
Sbjct: 7846 KPSAEA 7851
>gi|426243701|ref|XP_004015689.1| PREDICTED: upstream stimulatory factor 2 [Ovis aries]
Length = 328
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 218 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 276
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 277 QRMQETFKE 285
>gi|631793|pir||S42396 USF2 protein - mouse (fragment)
gi|402876|gb|AAA20493.1| USF2, partial [Mus musculus]
Length = 212
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 102 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 160
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 161 QRMQETFKE 169
>gi|195472759|ref|XP_002088666.1| GE11346 [Drosophila yakuba]
gi|194174767|gb|EDW88378.1| GE11346 [Drosophila yakuba]
Length = 8015
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7419 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7478
Query: 80 SNSAEA 85
SAEA
Sbjct: 7479 KPSAEA 7484
>gi|380030281|ref|XP_003698779.1| PREDICTED: uncharacterized protein LOC100866869 [Apis florea]
Length = 1040
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 29 LQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASIDSNSAEAAII 88
L LIP L + K+S + +LQ+ DYIR L E + L + + L I+ + +
Sbjct: 859 LHSLIPHLNQNPNTKMSKAAMLQKGADYIRQLRAERNQLKEEMDSLRHQIECLNTSISNC 918
Query: 89 RSLL 92
+S+L
Sbjct: 919 QSML 922
>gi|194760671|ref|XP_001962561.1| GF14378 [Drosophila ananassae]
gi|190616258|gb|EDV31782.1| GF14378 [Drosophila ananassae]
Length = 8003
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7407 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7466
Query: 80 SNSAEA 85
SAEA
Sbjct: 7467 KPSAEA 7472
>gi|38147785|gb|AAN63092.1| upstream stimulatory factor 2c [Homo sapiens]
Length = 215
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL 60
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 105 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIREL 159
>gi|195385902|ref|XP_002051643.1| GJ11158 [Drosophila virilis]
gi|194148100|gb|EDW63798.1| GJ11158 [Drosophila virilis]
Length = 8387
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7791 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNELKSSHKEIEALSKSILTFLGEVH 7850
Query: 80 SNSAEA 85
SAEA
Sbjct: 7851 KPSAEA 7856
>gi|442626147|ref|NP_001260089.1| Muscle-specific protein 300, isoform K [Drosophila melanogaster]
gi|440213383|gb|AGB92625.1| Muscle-specific protein 300, isoform K [Drosophila melanogaster]
Length = 11917
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7358 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7417
Query: 80 SNSAEA 85
SAEA
Sbjct: 7418 KPSAEA 7423
>gi|320544548|ref|NP_001188697.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster]
gi|318068312|gb|ADV36947.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster]
Length = 11999
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7427 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7486
Query: 80 SNSAEA 85
SAEA
Sbjct: 7487 KPSAEA 7492
>gi|320544546|ref|NP_001188696.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster]
gi|318068311|gb|ADV36946.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster]
Length = 11986
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 22 IGDLVSKLQQLIPELRSRR--SDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID 79
+G L K + + P +RSRR D +A + L+E + ++S H+E++ LS + L +
Sbjct: 7427 LGRLEDKFRNVDPTVRSRRHLEDTKNAIQELREESNQLKSSHKEIEALSKSILTFLGEVH 7486
Query: 80 SNSAEA 85
SAEA
Sbjct: 7487 KPSAEA 7492
>gi|11994806|dbj|BAB19966.1| USF2 splicing variant-2 [Rattus norvegicus]
Length = 279
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL 60
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 169 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIREL 223
>gi|417409826|gb|JAA51403.1| Putative helix loop helix transcription factor eb, partial
[Desmodus rotundus]
Length = 338
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 228 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 285
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 286 ---NHRLSEELQGLDQLQLDNDVLR 307
>gi|332262024|ref|XP_003280064.1| PREDICTED: upstream stimulatory factor 2 isoform 1 [Nomascus
leucogenys]
Length = 224
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 114 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 172
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 173 QRMQETFKE 181
>gi|90082717|dbj|BAE90540.1| unnamed protein product [Macaca fascicularis]
Length = 224
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 114 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 172
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 173 QRMQETFKE 181
>gi|11994804|dbj|BAB19965.1| USF2 splicing variant-1 [Rattus norvegicus]
Length = 319
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 209 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIRELRQTN 267
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 268 QRMQETFKE 276
>gi|440905784|gb|ELR56118.1| Upstream stimulatory factor 2, partial [Bos grunniens mutus]
Length = 329
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 219 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 277
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 278 QRMQETFKE 286
>gi|351711087|gb|EHB14006.1| Upstream stimulatory factor 2, partial [Heterocephalus glaber]
Length = 232
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 122 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNTDNS-KTGASKGGILSKACDYIRELRQTN 180
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 181 QRMQETFKE 189
>gi|431916127|gb|ELK16381.1| Upstream stimulatory factor 1, partial [Pteropus alecto]
Length = 303
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 193 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 250
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 251 ---NHRLSEELQGLDQLQLDNDVLR 272
>gi|410053699|ref|XP_003954533.1| PREDICTED: LOW QUALITY PROTEIN: upstream stimulatory factor 2,
partial [Pan troglodytes]
Length = 237
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 127 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 185
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 186 QRMQETFKE 194
>gi|311257382|ref|XP_003127090.1| PREDICTED: upstream stimulatory factor 2 isoform 2 [Sus scrofa]
Length = 279
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL 60
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 169 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIREL 223
>gi|2197099|gb|AAC48765.1| upstream stimulatory factor 1b [Oryctolagus cuniculus]
Length = 282
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 172 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 229
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 230 ---NHRLSEELQGLDQLQLDNDVLR 251
>gi|340377873|ref|XP_003387453.1| PREDICTED: hairy/enhancer-of-split related with YRPW motif
protein 1-like [Amphimedon queenslandica]
Length = 290
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 6 SRSRQSSGVSRISYDQIGDLVSKLQQLIPE-LRSRRSDKVSASKILQETCDYIRSLHREV 64
SR ++ + + D+I + + +L++L+P + S K+ ++ILQ T D++R LH+
Sbjct: 29 SRKKRRGIIEKRRRDRINNCLMELRRLVPAAFEKQGSAKLEKAEILQMTVDHLRHLHQTR 88
Query: 65 D 65
D
Sbjct: 89 D 89
>gi|261071|gb|AAB24368.1| upstream stimulatory factor [Homo sapiens]
Length = 234
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 124 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 182
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 183 QRMQETFKE 191
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P S + +L E +Y++SL
Sbjct: 255 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 310
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 311 RQVEFLSMKLASVNPTLDLN 330
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR + S ++ R+ ++I + LQ L+P + V + +L E +Y++SL
Sbjct: 282 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 337
Query: 62 REVDDLSDRLSELLASIDSNS 82
R+V+ LS +L+ + +D NS
Sbjct: 338 RQVEFLSMKLATVNPQLDFNS 358
>gi|167536445|ref|XP_001749894.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771609|gb|EDQ85273.1| predicted protein [Monosiga brevicollis MX1]
Length = 570
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 25 LVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSELLASID-SNSA 83
VS+L + P+ SD ++A ++ ET YI ++ R D L+DR +EL S+D + A
Sbjct: 346 FVSRLLKETPKDHPEYSDLLAAEQLCHETVSYINNVTR--DSLADRATELAESLDRALHA 403
Query: 84 EAAIIRSLLM 93
I+ LL
Sbjct: 404 PDPIMTPLLF 413
>gi|1765922|emb|CAA64627.1| USF1 protein [Mus musculus]
Length = 310
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|149759831|ref|XP_001503926.1| PREDICTED: upstream stimulatory factor 1-like isoform 1 [Equus
caballus]
Length = 310
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|148692029|gb|EDL23976.1| upstream transcription factor 2, isoform CRA_b [Mus musculus]
Length = 259
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL 60
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 149 RRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNS-KTGASKGGILSKACDYIREL 203
>gi|46877105|ref|NP_997174.1| upstream stimulatory factor 2 isoform 2 [Homo sapiens]
gi|1279509|emb|CAA62340.1| USF2a, USF2b protein [Homo sapiens]
gi|410218102|gb|JAA06270.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
gi|410249532|gb|JAA12733.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
gi|410296830|gb|JAA27015.1| upstream transcription factor 2, c-fos interacting [Pan
troglodytes]
Length = 279
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL 60
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 169 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIREL 223
>gi|380798363|gb|AFE71057.1| upstream stimulatory factor 2 isoform 2, partial [Macaca mulatta]
Length = 263
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL 60
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L
Sbjct: 153 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIREL 207
>gi|195580641|ref|XP_002080143.1| GD21641 [Drosophila simulans]
gi|194192152|gb|EDX05728.1| GD21641 [Drosophila simulans]
Length = 451
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 22 IGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHREVDDLSDRLSEL 74
I + L LIP+L+ + K+S + +LQ+ D+I+ L +E + L D++ L
Sbjct: 259 IKNGFDTLHALIPQLQQNPNAKLSKAAMLQKGADHIKQLRQERNVLKDKIEAL 311
>gi|297852680|ref|XP_002894221.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340063|gb|EFH70480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 217
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 4 RRSRSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLHRE 63
+R +++ S G +++ +++G+ ++ LQQL+ K + +L ET YI+ L +
Sbjct: 68 KRDQTKSSVGNAKVKKEKVGERITALQQLVSPY-----GKTDTASVLHETMGYIKFLQDQ 122
Query: 64 VDDLS 68
V LS
Sbjct: 123 VQVLS 127
>gi|355727878|gb|AES09339.1| upstream transcription factor 2, c-fos interacting [Mustela
putorius furo]
Length = 226
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 138 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 196
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 197 QRMQETFKE 205
>gi|354489503|ref|XP_003506901.1| PREDICTED: upstream stimulatory factor 1-like [Cricetulus griseus]
Length = 310
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ S S K SK IL + CDYI+ L +
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDC-SMESTKSGQSKGGILSKACDYIQELRQS- 257
Query: 65 DDLSDRLSELLASIDSNSAEAAIIR 89
+ RLSE L +D + ++R
Sbjct: 258 ---NHRLSEELQGLDQLQLDNDVLR 279
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 3 SRRSRSRQSSGVS-RISYDQIGDLVSKLQQLIPELRSRRSDKVSASKILQETCDYIRSLH 61
+RR ++ S ++ R+ ++I + + LQ L+P V +L E +Y++SL
Sbjct: 261 ARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAV----MLDEIINYVQSLQ 316
Query: 62 REVDDLSDRLSELLASIDSN 81
R+V+ LS +L+ + ++D N
Sbjct: 317 RQVEFLSMKLASVNPTLDFN 336
>gi|448352033|ref|ZP_21540826.1| hypothetical protein C484_20877 [Natrialba taiwanensis DSM 12281]
gi|445632115|gb|ELY85334.1| hypothetical protein C484_20877 [Natrialba taiwanensis DSM 12281]
Length = 300
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 21 QIGDLVSKLQQLIPELRSRRSDKVSASKILQETC----DYIRSLHREVDDLSDRLSELLA 76
Q+ + ++L+ L +L RRS+ S+ + TC D I L +VD DRL+EL
Sbjct: 131 QLDSVTNRLEALDSQLEHRRSETTSSLADFEATCTALEDSIAELEADVDTYGDRLTELET 190
Query: 77 SIDS 80
ID+
Sbjct: 191 RIDT 194
>gi|148230042|ref|NP_001088700.1| upstream transcription factor 2, c-fos interacting [Xenopus laevis]
gi|56269927|gb|AAH87339.1| LOC495964 protein [Xenopus laevis]
Length = 310
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSL---- 60
R Q + V R D+I + + +L ++IP+ + S K +ASK IL + CDYIR L
Sbjct: 200 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNAE-STKTAASKGGILSKACDYIRELRQTN 258
Query: 61 ------HREVDDLSDRLSELLASIDSNSAEAAIIRSLL 92
++E + L L I+ E A++R+ L
Sbjct: 259 QRVQETYKEAERLQMDNELLRQQIEDQKNENALLRAQL 296
>gi|397490592|ref|XP_003816284.1| PREDICTED: upstream stimulatory factor 2, partial [Pan paniscus]
Length = 268
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 158 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 216
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 217 QRMQETFKE 225
>gi|355703426|gb|EHH29917.1| Upstream transcription factor 2, partial [Macaca mulatta]
Length = 271
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 7 RSRQSSGVSRISYDQIGDLVSKLQQLIPELRSRRSDKVSASK--ILQETCDYIRSLHREV 64
R Q + V R D+I + + +L ++IP+ + S K ASK IL + CDYIR L +
Sbjct: 161 RRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNS-KTGASKGGILSKACDYIRELRQTN 219
Query: 65 DDLSDRLSE 73
+ + E
Sbjct: 220 QRMQETFKE 228
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,015,171,898
Number of Sequences: 23463169
Number of extensions: 29222838
Number of successful extensions: 191764
Number of sequences better than 100.0: 524
Number of HSP's better than 100.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 362
Number of HSP's that attempted gapping in prelim test: 191287
Number of HSP's gapped (non-prelim): 612
length of query: 93
length of database: 8,064,228,071
effective HSP length: 63
effective length of query: 30
effective length of database: 6,586,048,424
effective search space: 197581452720
effective search space used: 197581452720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)